BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036661
(615 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/615 (64%), Positives = 495/615 (80%)
Query: 1 MAASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFI 60
M + N+ T+ QWNS I E+V++ AHKALLLFR+MK+N +EPNNLTFP +
Sbjct: 1 MVTPAATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSV 60
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
AKAC+KL + YSQ++H H+VKS F +D+FVQT++VDMY KC +L AY LF +MP RDV
Sbjct: 61 AKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDV 120
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
ASWN+MI+GFAQ+GF+++V+ LF M + GI+AD VTV+GLT +A+ K L +L+S+HSF
Sbjct: 121 ASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSF 180
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
GI IG+D DVSV NTWI+AYAKC + +AE VF GI++GL+T VSWNS+I G + ++
Sbjct: 181 GIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCS 240
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++ F++ M+ GFR D++T++SLLSSCV PE L G+L+H+HGI G D D+ VINTLI
Sbjct: 241 KAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLI 300
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
SMYSKCGDI SAR+LFD M +TRVSWTAMI+GYA+KGDLDEA+ LF AMEA GE PDLV
Sbjct: 301 SMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLV 360
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++S++SGCGQ+GALELGKW D YA + GLKDN+MVCNALID+Y+KCGS+ +ARELFY +
Sbjct: 361 TIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTM 420
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
PEK++VSWTT+IAGCALNGEF EAL LF QM+EL L+PN +TFLAVLQAC HAGFLEKGW
Sbjct: 421 PEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGW 480
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
FNLMTKVY++NP L+HYSCMADLLGRKG+LKEA +F+Q+MP K D GIW LL ACKI
Sbjct: 481 ECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKI 540
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+N+ IGE VAY LFELEP +A PYV+MANIYA G+WD VA +RTMMK N+ K PG+S
Sbjct: 541 HQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKS 600
Query: 601 LVHINGKTCTFTVED 615
LV +NGKT FTVED
Sbjct: 601 LVQVNGKTHEFTVED 615
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/615 (62%), Positives = 484/615 (78%), Gaps = 7/615 (1%)
Query: 1 MAASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFI 60
M + N+ T+ QWNS I E+V++ AHKALLLFR+MK+N +EPNNLTFP +
Sbjct: 1 MVTPAATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSV 60
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
AKAC+KL + YSQ++H H+VKS F +D+FVQT++VDMY KC +L AY LF +MP RDV
Sbjct: 61 AKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDV 120
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
ASWN+MI GFAQ+GF+++V+ LF M + GI+AD VTV+GLT +A+ K L +L+S+HSF
Sbjct: 121 ASWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSF 180
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
GI IG+D DVSV NTWI+AYAKC + +AE VF GI++GL+T VSWNS+I G + ++
Sbjct: 181 GIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCS 240
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++ F++ M+ GFR D++T++SLLSSCV PE L G+L+H+HGI G D D+ VINTLI
Sbjct: 241 KAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLI 300
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
SMYSKCGDI SAR+LFD M +TRVSWTAMI+G A+KGDLDEA+ LF AMEA GE PDLV
Sbjct: 301 SMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLV 360
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++S++SGCGQ+GALELGKW D YA + GLKDN+MVCNALID+Y+KCGS+ +ARELFY +
Sbjct: 361 TIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTM 420
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
PEK++VSWTT+IAGCALNGEF EAL LF QM+EL L+PN +TFLAVLQAC HAGFLEKGW
Sbjct: 421 PEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGW 480
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
FNLMTKVY++NP L+HYSCMADLLGRKG+LKEA +F+Q+MP K D GIW LL ACKI
Sbjct: 481 ECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKI 540
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+N+ IGE VAY LFELEP +A PYV+MANIYA G+WD VA +RTMMK N+ K G+
Sbjct: 541 HQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSSGE- 599
Query: 601 LVHINGKTCTFTVED 615
K C+ ED
Sbjct: 600 ------KPCSSKWED 608
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/612 (60%), Positives = 466/612 (76%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
S+L LN + ST+ WNS IR AV++ A KAL LF ++K N ++PNN TFPF++KA
Sbjct: 2 STLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKA 61
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
CAKLS SQ+IH H+VKSPF+SDI+VQT MVDMY KC ++D AY LFDKMP R++ASW
Sbjct: 62 CAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASW 121
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NAMI+GF+Q+G L++V LF MRLVG + D TV+GLT+A I AK L LK+VH+ GI
Sbjct: 122 NAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIE 181
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G+DAD SV NTWI+AY+KC +L++A++VF GI++ R+ VSWNS+I + K+ D++
Sbjct: 182 TGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAV 241
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
Y+ ++ DGF+PD +T++SLLSSC PEAL+ G L+H HG G D D+S+INTLISMY
Sbjct: 242 KSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMY 301
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
S+CGDI SA LFDGM RT VSWTAMISGY++ G +D+AL LF AME GE PD+VTVL
Sbjct: 302 SRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVL 361
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
S+ISGCG++GAL LG W DNYA LK +V+VCNALIDMY+KCGS+ DARE+FY+LP +
Sbjct: 362 SLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNR 421
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
TVVSWT MIA CALNGEF EALDLF + E + PN +TFLAVLQAC H G+LEKG F
Sbjct: 422 TVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECF 481
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
+MT+ Y +NP L+HYSCM DLLGRKGKL EAL+ +Q MP+K D GIWG LL ACKIH N
Sbjct: 482 MMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNN 541
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+EIGEYV+ LFEL+P A +VEMANIYA GRWD VA +R M+ NQ++K PG+S+V
Sbjct: 542 MEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQ 601
Query: 604 INGKTCTFTVED 615
+NG + F VED
Sbjct: 602 VNGMSHVFFVED 613
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/599 (59%), Positives = 444/599 (74%), Gaps = 3/599 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S++N WN Q+REAV++N+ ++LLLFR MK+ EPNN TFPF+AKACA+L+ Y +M+
Sbjct: 611 SSVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMV 670
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H H++KSPFWSD+FV T VDM+ KCD LD A K+F++MP RD +WNAM+ GF Q G
Sbjct: 671 HTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHT 730
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+KV LF MRL I D VTVM L Q+A K L LLK +H+FGI +GVD +V NTW
Sbjct: 731 DKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTW 790
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFR 255
ISAY KC DL A+LVF I+ G RTVVSWNS+ +G+ F D+ YR M+ D F+
Sbjct: 791 ISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAF-DAFGHYRLMLRDEFK 849
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD++T ++L +SC P+ L QGRL+HSH IH G D D+ INT ISMYSK GD SAR L
Sbjct: 850 PDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLL 909
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M RT VSWT MISGYA+KGD+DEAL LF AM G PDLVT+LS+ISGCG+ G+L
Sbjct: 910 FDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSL 969
Query: 376 ELGKWFDNYA-CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
E+GKW D A G KDNVMVCNALIDMYSKCGSI +AR++F EKT+V+WTTMIAG
Sbjct: 970 EIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAG 1029
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
ALNG F+EA++LF +M++LD +PN +TFLAVLQAC H+G LEKGW YF++M +VY ++P
Sbjct: 1030 YALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISP 1089
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
L+HYSCM DLLGRKGKL EAL+ + +M K DAGIWG LL ACKIHRN++I E A L
Sbjct: 1090 GLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAADSL 1149
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
F LEP AAPYVEM+NIYA G WDG A +R+MMK +KK+PG+S++ +NGK TFTV
Sbjct: 1150 FNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVIQVNGKNHTFTV 1208
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/607 (58%), Positives = 450/607 (74%), Gaps = 3/607 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL +I S++N WN QIREAV++N+ ++LLLFR MK+ EPNN TFPF+AKACA+L+
Sbjct: 613 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 672
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
D +M+H H++KSPFWSD+FV T VDM+ KC+ +D A K+F++MP+RD +WNAM+
Sbjct: 673 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 732
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF Q G +K LF MRL I D VTVM L Q+A K L LL+++H+ GI +GVD
Sbjct: 733 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 792
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYR 247
V+V NTWIS Y KC DL A+LVF I+ G RTVVSWNS+ +G+ F D+ Y
Sbjct: 793 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF-DAFGLYC 851
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ + F+PD++T ++L +SC PE L QGRL+HSH IH G D D+ INT ISMYSK
Sbjct: 852 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 911
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
D SAR LFD M RT VSWT MISGYA+KGD+DEAL LF AM +GE PDLVT+LS+IS
Sbjct: 912 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 971
Query: 368 GCGQSGALELGKWFDNYA-CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
GCG+ G+LE GKW D A G +DNVM+CNALIDMYSKCGSI +AR++F PEKTVV
Sbjct: 972 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 1031
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
+WTTMIAG ALNG F+EAL LF +M++LD +PN +TFLAVLQAC H+G LEKGW YF++M
Sbjct: 1032 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 1091
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
+VY ++P L+HYSCM DLLGRKGKL+EAL+ +++M K DAGIWG LL ACKIHRN++I
Sbjct: 1092 KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKI 1151
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
E A LF LEP AAPYVEMANIYA G WDG A +R++MK+ +KK+PG+S++ +NG
Sbjct: 1152 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNG 1211
Query: 607 KTCTFTV 613
K +FTV
Sbjct: 1212 KNHSFTV 1218
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 455/603 (75%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I R ST+ WNS R V++ A AL+LFR+MK++ I PNN TFPF+ KACAKLS
Sbjct: 12 INRFSTLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRN 71
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
SQ+IH H++KS F S+IFVQT VDMY KC RL+ A+ +F +MP RD+ASWNAM++GFAQ
Sbjct: 72 SQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQ 131
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
GFL+++ CL +MRL GI+ D VTV+ L + + K L+ L +V+SFGI IGV DVSV
Sbjct: 132 SGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSV 191
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
NT I+AY+KC +L AE +F I GLR+VVSWNS+I +K ++N Y+ M+
Sbjct: 192 ANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDG 251
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
GF PD++T+++LLSSC+ P+AL G LVHSHG+ G D DV V+NTLI MYSKCGD+ SA
Sbjct: 252 GFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSA 311
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
RFLF+GM D+T VSWT MIS YA+KG + EA+ LF AMEAAGE PDLVTVL++ISGCGQ+
Sbjct: 312 RFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQT 371
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GALELGKW DNY+ + GLKDNV+VCNALIDMY+KCG DA+ELFY + +TVVSWTTMI
Sbjct: 372 GALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMI 431
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
CALNG+ +AL+LF M+E+ ++PN +TFLAVLQAC H G +E+G FN+MT+ Y +
Sbjct: 432 TACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGI 491
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
NP ++HYSCM DLLGRKG L+EAL+ ++SMP + D+GIW LL ACK+H +E+G+YV+
Sbjct: 492 NPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSE 551
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+LFELEP A PYVEMANIYA W+GVA +R MK QV+K PGQS++ +NGK FT
Sbjct: 552 QLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTIFT 611
Query: 613 VED 615
VED
Sbjct: 612 VED 614
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/607 (58%), Positives = 450/607 (74%), Gaps = 3/607 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL +I S++N WN QIREAV++N+ ++LLLFR MK+ EPNN TFPF+AKACA+L+
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
D +M+H H++KSPFWSD+FV T VDM+ KC+ +D A K+F++MP+RD +WNAM+
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF Q G +K LF MRL I D VTVM L Q+A K L LL+++H+ GI +GVD
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYR 247
V+V NTWIS Y KC DL A+LVF I+ G RTVVSWNS+ +G+ F D+ Y
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF-DAFGLYC 245
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ + F+PD++T ++L +SC PE L QGRL+HSH IH G D D+ INT ISMYSK
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
D SAR LFD M RT VSWT MISGYA+KGD+DEAL LF AM +GE PDLVT+LS+IS
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 368 GCGQSGALELGKWFDNYA-CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
GCG+ G+LE GKW D A G +DNVM+CNALIDMYSKCGSI +AR++F PEKTVV
Sbjct: 366 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
+WTTMIAG ALNG F+EAL LF +M++LD +PN +TFLAVLQAC H+G LEKGW YF++M
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
+VY ++P L+HYSCM DLLGRKGKL+EAL+ +++M K DAGIWG LL ACKIHRN++I
Sbjct: 486 KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKI 545
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
E A LF LEP AAPYVEMANIYA G WDG A +R++MK+ +KK+PG+S++ +NG
Sbjct: 546 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNG 605
Query: 607 KTCTFTV 613
K +FTV
Sbjct: 606 KNHSFTV 612
>gi|255582516|ref|XP_002532043.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528286|gb|EEF30333.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 468
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/443 (64%), Positives = 355/443 (80%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TIN +NSQIREAV++N AHKA+ LFR++K+ IEPNN TFPFI KACAKLS+ YSQ+IH
Sbjct: 2 TINLFNSQIREAVNQNCAHKAISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIH 61
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
H++KSPF+S++FVQT ++DM KC +LD AY +F KMP RDV SWNAM++GFAQ+GF E
Sbjct: 62 THVIKSPFYSNVFVQTALLDMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSE 121
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+V C+F MR G+ D VT+MG++ A K L L KSVHSFGI IG+ DVSV NTWI
Sbjct: 122 RVFCMFREMRFAGVFPDSVTLMGVSGAISCMKDLELAKSVHSFGIRIGIHNDVSVANTWI 181
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S YAKC DL MAE VF GIE GLR+VVSWNS+I G Y +K D+LN Y+ M++DGF PD
Sbjct: 182 SLYAKCYDLAMAESVFNGIEVGLRSVVSWNSMIAGYAYLEKRIDALNSYKRMLHDGFMPD 241
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
++T+V+LLSSC+ PEA+ QG VHSHGI +G D ++ V NTLISMYSK GD+ SAR LFD
Sbjct: 242 ISTIVTLLSSCLQPEAVRQGMQVHSHGIRFGCDSEIHVANTLISMYSKFGDVYSARCLFD 301
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
MC+R+ V+WT+MISGYA+KG++DEAL+LF AMEAAGE PDLVTVLS+ISGCGQ+G LE+
Sbjct: 302 SMCNRSCVTWTSMISGYAEKGNMDEALKLFNAMEAAGEKPDLVTVLSVISGCGQTGILEV 361
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GKW YA S LK NV+VCNALIDMY+KCGSI DA +LF +P++TVV+WTTMIAGCAL
Sbjct: 362 GKWIHVYADSNCLKHNVVVCNALIDMYAKCGSIDDAWDLFNTMPDRTVVTWTTMIAGCAL 421
Query: 438 NGEFVEALDLFHQMMELDLRPNR 460
NG F E+LDLF+QM++ L+PN
Sbjct: 422 NGLFKESLDLFYQMIDFGLKPNH 444
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 221/453 (48%), Gaps = 18/453 (3%)
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
+N+ I K + LF ++ GI+ + T + +A +L + +H+ I
Sbjct: 6 FNSQIREAVNQNCAHKAISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIHTHVI 65
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
++V V + KC+ L +A VF + + R V SWN+++ G +
Sbjct: 66 KSPFYSNVFVQTALLDMCVKCHQLDIAYNVFVKMPK--RDVTSWNAMLLGFAQLGFSERV 123
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
+R M + G PD T++ + + C + L + VHS GI G DVSV NT IS+
Sbjct: 124 FCMFREMRFAGVFPDSVTLMGVSGAISCMKDLELAKSVHSFGIRIGIHNDVSVANTWISL 183
Query: 303 YSKCGDIDSARFLFDGM--CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
Y+KC D+ A +F+G+ R+ VSW +MI+GYA +AL + M G +PD+
Sbjct: 184 YAKCYDLAMAESVFNGIEVGLRSVVSWNSMIAGYAYLEKRIDALNSYKRMLHDGFMPDIS 243
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+++++S C Q A+ G ++ G + V N LI MYSK G + AR LF ++
Sbjct: 244 TIVTLLSSCLQPEAVRQGMQVHSHGIRFGCDSEIHVANTLISMYSKFGDVYSARCLFDSM 303
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG- 479
++ V+WT+MI+G A G EAL LF+ M +P+ VT L+V+ C G LE G
Sbjct: 304 CNRSCVTWTSMISGYAEKGNMDEALKLFNAMEAAGEKPDLVTVLSVISGCGQTGILEVGK 363
Query: 480 WGYFNLMTKVYQVNPELNHY----SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
W VY + L H + + D+ + G + +A D +MP ++ W T++
Sbjct: 364 W------IHVYADSNCLKHNVVVCNALIDMYAKCGSIDDAWDLFNTMPDRT-VVTWTTMI 416
Query: 536 CACKIHRNIEIGEYVAYRL--FELEPHSAAPYV 566
C ++ + + Y++ F L+P+ ++
Sbjct: 417 AGCALNGLFKESLDLFYQMIDFGLKPNHEEEFL 449
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/594 (40%), Positives = 355/594 (59%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I V +KAL L+ +M++ I P+ L F + KAC SD + +H I+
Sbjct: 88 WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F SD+ V T + MY KC L+ A ++FD+MP RDV SWNA+I G++Q G + L
Sbjct: 148 ARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALA 207
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M++ GI+ + T++ + H L K +H + I G+++DV V N ++ YA
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA 267
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F + +R V SWN+IIGG + + ++L F+ M G +P+ T+
Sbjct: 268 KCGNVNTAHKLFERMP--IRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITM 325
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS+L +C AL QG+ +H + I GF+ + V N L++MY+KCG+++SA LF+ M
Sbjct: 326 VSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPK 385
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W A+ISGY+Q G EAL LF M+A G PD ++S++ C ALE GK
Sbjct: 386 KNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQI 445
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y G + NV+V L+D+Y+KCG++ A++LF +PE+ VVSWTTMI ++G
Sbjct: 446 HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHG 505
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL LF +M E + + + F A+L AC+HAG +++G YF M Y + P+L HY+C
Sbjct: 506 EDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYAC 565
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G L EA +++M ++ DA +WG LL AC+IH NIE+GE A LFEL+P +
Sbjct: 566 LVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDN 625
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A YV ++NIYA RW+ VA LR MMK VKK PG S+V ++ TF V D
Sbjct: 626 AGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGD 679
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
V W I G ++ +L Y M G PD +S++ +C L GR VH
Sbjct: 86 VVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHED 145
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
I GF+ DV V L SMY+KCG +++AR +FD M R VSW A+I+GY+Q G EA
Sbjct: 146 IIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEA 205
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
L LF M+ G P+ T++S++ C ALE GK YA G++ +V+V N L++M
Sbjct: 206 LALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNM 265
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y+KCG++ A +LF +P + V SW +I G +LN + EAL F++M ++PN +T
Sbjct: 266 YAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITM 325
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
++VL AC H LE+G + ++ N + + + ++ + G + A + M
Sbjct: 326 VSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG--NALVNMYAKCGNVNSAYKLFERM 383
Query: 523 PIKSDAGIWGTLLCACKIH 541
P K + W ++ H
Sbjct: 384 P-KKNVVAWNAIISGYSQH 401
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 152/302 (50%), Gaps = 3/302 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ I ++ H+AL F RM+ I+PN++T + ACA L Q IHG
Sbjct: 287 VASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG 346
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ ++S F S+ V +V+MYAKC ++ AYKLF++MP ++V +WNA+I G++Q G +
Sbjct: 347 YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHE 406
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF M+ GI+ D ++ + A H L K +H + I G +++V V +
Sbjct: 407 ALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVD 466
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC ++ A+ +F + E + VVSW ++I +D+L + M G + D
Sbjct: 467 IYAKCGNVNTAQKLFERMPE--QDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDH 524
Query: 259 TTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
++L++C + QG + YG + L+ + + G +D A +
Sbjct: 525 IAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIK 584
Query: 318 GM 319
M
Sbjct: 585 NM 586
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/590 (37%), Positives = 346/590 (58%), Gaps = 2/590 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+++ ++ + AL RM+ +D++P F ++ K C +D + IHG ++
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F +++F T +V+MYAKC ++D AYK+FD+MP+RD+ SWN +I GF+Q GF +K L
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M+ G + D +T++ + AA L + KS+H + I G V++ Y+
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS 294
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A L+F G+++ +TVVSWNS++ G + + ++ + M+ +G P T+
Sbjct: 295 KCGSVETARLIFDGMDQ--KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ L +C L +G+ VH D+SV+N+LISMYSKC +D A +F+ +
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
RT VSW AMI GYAQ G + EAL F M++ G PD T++S+I + KW
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L N+ V AL+DMYSKCG+I AR+LF + ++ V++W MI G +G
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
ALDLF +M + + PN +T+L+V+ AC+H+G +++G +F M + Y + P ++HY
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G++KEA DF+++MPI ++G +L ACKIH+NIE+GE A +LFEL P
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDE 652
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+V +ANIYA +W VA +R M++ +KK PG S+V + + +F
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSF 702
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 3/303 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS + V E KA+ +F +M + I+P +T ACA L D + +H
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + SDI V +++ MY+KC R+D A +F+ + R SWNAMI+G+AQ G +
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVS 432
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F M+ +G++ D T++ + A K +H I +D ++ V +
Sbjct: 433 EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALV 492
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC + MA +F I + R V++WN++I G +L+ + M P+
Sbjct: 493 DMYSKCGAIHMARKLFDMISD--RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPN 550
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T +S++S+C + +G R S YG + + ++ + + G I A
Sbjct: 551 DITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFI 610
Query: 317 DGM 319
+ M
Sbjct: 611 ENM 613
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+S++SK G I+ A +F+ + D+ + M+ GYA+ L+ AL M P
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ ++ CG + L+ GK + NV +++MY+KC I DA ++F
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+PE+ +VSW T+IAG + NG +AL+L +M + RP+ +T + VL A G L
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 479 G 479
G
Sbjct: 267 G 267
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL + + L+ ++SK GSI +A +F + +K + TM+ G A N AL
Sbjct: 76 GLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFL 135
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLG 507
+M D++P F +L+ C L++G + L+T + N + + + ++
Sbjct: 136 CRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAAN--VFAMTGVVNMYA 193
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ ++ +A MP + D W T++
Sbjct: 194 KCRQIDDAYKMFDRMP-ERDLVSWNTIIAG 222
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/590 (36%), Positives = 344/590 (58%), Gaps = 2/590 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+++ ++ + AL RM+ +D++P F ++ K C +D + IHG ++
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F +++F T +V+MYAKC ++D AYK+FD+MP+RD+ SWN +I GF+Q GF +K L
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M+ G + D +T++ + AA L + KS+H + I G V++ Y+
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS 294
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A L+F G+++ +TVVSWNS++ G + + ++ + M+ +G P T+
Sbjct: 295 KCGSVETARLIFDGMDQ--KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ L +C L +G+ VH D+SV+N+LISMYSKC +D A +F+ +
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
RT VSW AMI GYAQ G + EAL F M++ G PD T++S+I + KW
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L N+ V AL+DMYSKCG+I AR+LF + ++ V++W MI G +G
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
ALDLF +M + + PN +T+L+V+ AC+H+G +++G +F M + Y + P ++HY
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G++KEA DF+++MPI ++G ACKIH+NIE+GE A +LFEL P
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDE 652
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+V +ANIYA +W VA +R M++ +KK PG S+V + + +F
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSF 702
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 3/303 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS + V E KA+ +F +M + I+P +T ACA L D + +H
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + SDI V +++ MY+KC R+D A +F+ + R SWNAMI+G+AQ G +
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVS 432
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F M+ +G++ D T++ + A K +H I +D ++ V +
Sbjct: 433 EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALV 492
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC + MA +F I + R V++WN++I G +L+ + M P+
Sbjct: 493 DMYSKCGAIHMARKLFDMISD--RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPN 550
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T +S++S+C + +G R S YG + + ++ + + G I A
Sbjct: 551 DITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFI 610
Query: 317 DGM 319
+ M
Sbjct: 611 ENM 613
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+S++SK G I+ A +F+ + D+ + M+ GYA+ L+ AL M P
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ ++ CG + L+ GK + NV +++MY+KC I DA ++F
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+PE+ +VSW T+IAG + NG +AL+L +M + RP+ +T + VL A G L
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 479 G 479
G
Sbjct: 267 G 267
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL + + L+ ++SK GSI +A +F + +K + TM+ G A N AL
Sbjct: 76 GLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFL 135
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLG 507
+M D++P F +L+ C L++G + L+T + N + + + ++
Sbjct: 136 CRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAAN--VFAMTGVVNMYA 193
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ ++ +A MP + D W T++
Sbjct: 194 KCRQIDDAYKMFDRMP-ERDLVSWNTIIAG 222
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/574 (37%), Positives = 336/574 (58%), Gaps = 2/574 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL F RMK + + P F ++ K C SD + IHG ++ S F ++F T +V+
Sbjct: 14 ALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVN 73
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MYAKC +++ AY +FD+MP+RD+ WN MI G+AQ GF + L L M G + D +T
Sbjct: 74 MYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSIT 133
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ + A + L + +VH + + G ++ V+V + Y+KC + +A ++F G++
Sbjct: 134 IVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMD 193
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
RTVVSWNS+I G + ++ ++ M+ +G +P TV+ L +C L +G
Sbjct: 194 H--RTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERG 251
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+ VH D DVSV+N+LISMYSKC +D A +F + ++T VSW AMI GYAQ
Sbjct: 252 KFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQN 311
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G ++EAL F M++ PD T++S+I + KW L NV V
Sbjct: 312 GCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVM 371
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
AL+DMY+KCG+I AR+LF + + V++W MI G +G +++LF +M + ++
Sbjct: 372 TALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIK 431
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN +TFL L AC+H+G +E+G +F M K Y + P ++HY M DLLGR G+L +A D
Sbjct: 432 PNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWD 491
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F+Q MPIK ++G +L ACKIH+N+++GE A+ +F+L P +V +ANIYA
Sbjct: 492 FIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASM 551
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
W VA +RT+M+++ ++K PG SLV I + +F
Sbjct: 552 WGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSF 585
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 212/419 (50%), Gaps = 4/419 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I A AL+L RM + P+++T I A A +HG+++
Sbjct: 99 WNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVL 158
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F S + V T +VDMY+KC + A +FD M R V SWN+MI G+ Q G E +
Sbjct: 159 RAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAML 218
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G+Q VTVMG A L K VH + +D+DVSV N+ IS Y+
Sbjct: 219 IFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYS 278
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A +F+ + +T+VSWN++I G +++LN + M +PD T+
Sbjct: 279 KCKRVDIAADIFKNLRN--KTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTM 336
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS++ + Q + +H I D +V V+ L+ MY+KCG I +AR LFD M
Sbjct: 337 VSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNA 396
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-W 380
R ++W AMI GY G ++ LF M+ P+ +T L +S C SG +E G +
Sbjct: 397 RHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCF 456
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
F++ G++ + A++D+ + G + A + +P K ++ + M+ C ++
Sbjct: 457 FESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIH 515
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 132/251 (52%)
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
++ G D +L+F+ M +D RP V LL C L +G+ +H I G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
F ++ + +++MY+KC I+ A +FD M +R V W MISGYAQ G AL L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M G PD +T++S++ + L +G Y G + V V AL+DMYSKCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
S+ AR +F + +TVVSW +MI G +G+ A+ +F +M++ ++P VT + L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 469 ACTHAGFLEKG 479
AC G LE+G
Sbjct: 241 ACADLGDLERG 251
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 3/296 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS I V +A A+L+F++M ++P N+T ACA L D + +H
Sbjct: 196 TVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVH 255
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + SD+ V +++ MY+KC R+D A +F + ++ + SWNAMI+G+AQ G +
Sbjct: 256 KLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVN 315
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F M+ I+ D T++ + A K +H I +D +V V +
Sbjct: 316 EALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALV 375
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + A +F + R V++WN++I G S+ ++ M +P+
Sbjct: 376 DMYAKCGAIHTARKLFDMMNA--RHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPN 433
Query: 258 VTTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
T + LS+C + +G S YG + + ++ + + G ++ A
Sbjct: 434 DITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQA 489
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K R+ T+ WN+ I ++AL F M+ +I+P++ T + A A+LS
Sbjct: 291 KNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPR 350
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
++ IHG +++ ++FV T +VDMYAKC + A KLFD M R V +WNAMI G+
Sbjct: 351 QAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYG 410
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G + + LF M+ I+ + +T + A H+
Sbjct: 411 THGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHS 447
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/589 (36%), Positives = 341/589 (57%), Gaps = 11/589 (1%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
NS +R+AV + RM+ +++ P F ++ + + D + IHG ++
Sbjct: 120 NSTLRDAVR---------FYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVIT 170
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ F S++F T +V++YAKC +++ AYK+F++MP RD+ SWN ++ G+AQ GF + + +
Sbjct: 171 NGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQV 230
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
M+ G + D +T++ + A K L + +S+H + G + V+V + Y K
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
C ++ A LVF+G+ R VVSWN++I G + +++ + M+ +G P +++
Sbjct: 291 CGSVRSARLVFKGMSS--RNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMM 348
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
L +C L +GR VH DVSV+N+LISMYSKC +D A +F + +
Sbjct: 349 GALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHK 408
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
T V+W AMI GYAQ G ++EAL LF M++ PD T++S+I+ KW
Sbjct: 409 TVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIH 468
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A + NV VC ALID ++KCG+I AR+LF + E+ V++W MI G NG
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGR 528
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
EALDLF++M ++PN +TFL+V+ AC+H+G +E+G YF M + Y + P ++HY M
Sbjct: 529 EALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAM 588
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
DLLGR G+L +A F+Q MP+K + G +L AC+IH+N+E+GE A LF+L+P
Sbjct: 589 VDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDG 648
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+V +AN+YA WD VA +RT M++ ++K PG SLV + + TF
Sbjct: 649 GYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTF 697
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 211/419 (50%), Gaps = 4/419 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + A +A+ + +M++ +P+++T + A A L + IHG+
Sbjct: 211 WNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAF 270
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F + V T M+D Y KC + A +F M R+V SWN MI G+AQ G E+
Sbjct: 271 RAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFA 330
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M G++ V++MG A + L + VH + DVSV N+ IS Y+
Sbjct: 331 TFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYS 390
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A VF ++ +TVV+WN++I G +++LN + M +PD T+
Sbjct: 391 KCKRVDIAASVFGNLKH--KTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTL 448
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS++++ Q + +H I D +V V LI ++KCG I +AR LFD M +
Sbjct: 449 VSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQE 508
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-W 380
R ++W AMI GY G EAL LF M+ P+ +T LS+I+ C SG +E G +
Sbjct: 509 RHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYY 568
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
F++ + GL+ + A++D+ + G + DA + +P K + M+ C ++
Sbjct: 569 FESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIH 627
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 4/304 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + WN+ I E+ +A F +M +EP N++ ACA L D +
Sbjct: 306 SRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRY 365
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H + + D+ V +++ MY+KC R+D A +F + + V +WNAMI+G+AQ G
Sbjct: 366 VHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGC 425
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + L LF M+ I+ D T++ + A K +H I +D +V VC
Sbjct: 426 VNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTA 485
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I +AKC ++ A +F ++E R V++WN++I G ++L+ + M +
Sbjct: 486 LIDTHAKCGAIQTARKLFDLMQE--RHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVK 543
Query: 256 PDVTTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-R 313
P+ T +S++++C + +G S +YG + + ++ + + G +D A +
Sbjct: 544 PNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWK 603
Query: 314 FLFD 317
F+ D
Sbjct: 604 FIQD 607
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
LIS++ K I A +F+ + + V + M+ GYA+ L +A+R + M +P
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ ++ G++ L G+ + G + N+ A++++Y+KC I DA ++F
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFE 201
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+P++ +VSW T++AG A NG A+ + QM E +P+ +T ++VL A
Sbjct: 202 RMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPA 252
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ T+ WN+ I ++AL LF M+ +DI+P++ T + A A LS ++
Sbjct: 406 KHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAK 465
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG +++ ++FV T ++D +AKC + A KLFD M +R V +WNAMI G+ G
Sbjct: 466 WIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNG 525
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L LF M+ ++ + +T + + A H+
Sbjct: 526 HGREALDLFNEMQNGSVKPNEITFLSVIAACSHS 559
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 329/567 (58%), Gaps = 3/567 (0%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
++P+ T+P + KAC+ L Y +M+H H++KS F D+ V ++ V MYAKC+ + A
Sbjct: 294 LKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAI 353
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
KLFD+MP+RDVASWN +I + Q G EK L LF M++ G + D VT+ + +
Sbjct: 354 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 413
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L K +H + G D V + + Y KC L+MA+ VF I+ + VVSWNS+
Sbjct: 414 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQR--KNVVSWNSM 471
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G + + +R M +G RP +TT+ S+L +C L G+ +H + I
Sbjct: 472 IAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV 531
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ D+ V ++LI +Y KCG+I SA +F M VSW MISGY + G EAL +F
Sbjct: 532 EADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTD 591
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M AG PD +T S++ C Q LE GK N+ L+ N +V AL+DMY+KCG+
Sbjct: 592 MRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGA 651
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ +A +F LPE+ VSWT+MIA +G+ EAL LF +M + D +P++VTFLA+L A
Sbjct: 652 VDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSA 711
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP-IKSDA 528
C+HAG +++G YFN M Y P + HYSC+ DLLGR G+L+EA + +Q P I+ D
Sbjct: 712 CSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV 771
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM 588
G+ TL AC +H+ +++GE + L E +P + Y+ ++N+YA +WD V +R +
Sbjct: 772 GLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKI 831
Query: 589 KRNQVKKFPGQSLVHINGKTCTFTVED 615
K +KK PG S + + + F VED
Sbjct: 832 KELGLKKNPGCSWIEVGKRIHPFVVED 858
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 203/377 (53%), Gaps = 9/377 (2%)
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
K +H + +G+ ++++C + I+ Y C+ + A+LVF+ IE L + WN ++ CT
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAACT 273
Query: 235 YGDKFDDSLN-FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
F + L F+R + + +PD T S+L +C + G++VH+H I GF +DV
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V+++ + MY+KC + A LFD M +R SW +IS Y Q G ++AL LF M+ +
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD VT+ ++IS C + LE GK G + V +AL+DMY KCG + A
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMA 453
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+E+F + K VVSW +MIAG +L G+ ++LF +M E +RP T ++L AC+ +
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 513
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
L+ G + + +V ++ S + DL + G + A + Q+MP K++ W
Sbjct: 514 VNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNV 571
Query: 534 LLCACKIHRNIEIGEYV 550
+ I +++G Y+
Sbjct: 572 M-----ISGYVKVGSYL 583
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WTAMISGYA 335
G+L+H + G ++++ +LI++Y C SA+ +F + + ++ W +++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273
Query: 336 QKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
+ E L +F + + PD T S++ C G + GK + G +V
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+V ++ + MY+KC DA +LF +PE+ V SW +I+ +G+ +AL+LF +M
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
+P+ VT V+ +C LE+G + L+ + ++ ++ S + D+ G+ G L+
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS--SALVDMYGKCGCLE 451
Query: 514 EALDFVQSMPIKSDAGIWGTLL 535
A + + + K+ W +++
Sbjct: 452 MAKEVFEQIQRKNVVS-WNSMI 472
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ + WN I V +AL++F M+K ++P+ +TF + AC++L+ + I
Sbjct: 564 TNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI 623
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I++S + V ++DMYAKC +D A +F+++P+RD SW +MI + G
Sbjct: 624 HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQA 683
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L LF M+ + D VT + + A HA
Sbjct: 684 FEALKLFEKMQQSDAKPDKVTFLAILSACSHA 715
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 373 GALE--LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WT 429
ALE LGK S GL++N+ +C +LI++Y C A+ +F + ++ W
Sbjct: 207 SALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWN 266
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKGWG 481
++A C N F+E L++FH+++ L+P+ T+ +VL+AC+ G + G+G
Sbjct: 267 GLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRV--GYG 317
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/575 (37%), Positives = 328/575 (57%), Gaps = 2/575 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
KAL F RM+ +++EP F ++ K C ++ + IHG +VKS F D+F T +
Sbjct: 118 KALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+MYAKC ++ A K+FD+MP+RD+ SWN ++ G++Q G L + M ++ F+
Sbjct: 178 NMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFI 237
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + A + + + K +H + + G D+ V++ + YAKC LK A L+F G+
Sbjct: 238 TIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGM 297
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E R VVSWNS+I + +++ ++ M+ +G +P +V+ L +C L +
Sbjct: 298 LE--RNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +H + D +VSV+N+LISMY KC ++D+A +F + RT VSW AMI G+AQ
Sbjct: 356 GRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQ 415
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G EAL F M+A PD T +S+I+ + KW L NV V
Sbjct: 416 NGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFV 475
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
AL+DMY+KCG+I AR +F + E+ V +W MI G +G AL+LF +M + +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTI 535
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
RPN VTFL+V+ AC+H+G +E G F++M + Y + P ++HY M DLLGR G+L EA
Sbjct: 536 RPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAW 595
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
DF+ MP+K ++G +L AC+IH+N+ E VA RLFEL P +V +ANIY
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAAS 655
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
W+ V +R M R ++K PG S+V I + +F
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 208/426 (48%), Gaps = 7/426 (1%)
Query: 46 KKNDIEPNNLTFP--FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD 103
++N I N P + + C+ L + + I I K+ + + QT +V ++ +
Sbjct: 27 QRNYIPANVYEHPAALLLERCSSLKELRH---ILPLIFKNGLYQEHLFQTKLVSLFCRYG 83
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+D A ++F+ + + + M+ GFA++ L+K L F MR ++ L +
Sbjct: 84 SVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLK 143
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
L + K +H + G D+ + YAKC + A VF + E R +
Sbjct: 144 VCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPE--RDL 201
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWN+I+ G + +L M + +P T+VS+L + + G+ +H +
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGY 261
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ GFD V++ L+ MY+KCG + +AR LFDGM +R VSW +MI Y Q + EA
Sbjct: 262 AMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+ +F M G P V+V+ + C G LE G++ + L NV V N+LI M
Sbjct: 322 MVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISM 381
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y KC + A +F L +T+VSW MI G A NG +EAL+ F QM ++P+ T+
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTY 441
Query: 464 LAVLQA 469
++V+ A
Sbjct: 442 VSVITA 447
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 220/436 (50%), Gaps = 4/436 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + A AL + M + +++P+ +T + A + L + IHG+ +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAM 263
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F S + + T +VDMYAKC L A LFD M +R+V SWN+MI + Q ++ +
Sbjct: 264 RAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMV 323
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G++ V+VMG A L + +H + + +D +VSV N+ IS Y
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYC 383
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F ++ RT+VSWN++I G + ++LN++ M +PD T
Sbjct: 384 KCKEVDTAASMFGKLQS--RTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTY 441
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS++++ + +H + D +V V L+ MY+KCG I AR +FD M +
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 501
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
R +W AMI GY G AL LF M+ P+ VT LS+IS C SG +E G K
Sbjct: 502 RHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKC 561
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNG 439
F + ++ ++ A++D+ + G + +A + +P K V+ + M+ C ++
Sbjct: 562 FHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 621
Query: 440 EFVEALDLFHQMMELD 455
A + ++ EL+
Sbjct: 622 NVNFAEKVAERLFELN 637
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 2/283 (0%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+S + + + A VF I++ L V + +++ G D +L F+ M D P
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDKKLN--VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEP 133
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
V LL C L G+ +H + GF LD+ + L +MY+KC + AR +F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVF 193
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +R VSW +++GY+Q G AL + M P +T++S++ +
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIR 253
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+GK YA G V + AL+DMY+KCGS+ AR LF + E+ VVSW +MI
Sbjct: 254 IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
N EA+ +F +M++ ++P V+ + L AC G LE+G
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 119/239 (49%), Gaps = 2/239 (0%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+S++ + G +D A +F+ + + V + M+ G+A+ DLD+AL+ F M P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ ++ CG L +GK G ++ L +MY+KC + +AR++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFD 194
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+PE+ +VSW T++AG + NG AL++ + M E +L+P+ +T ++VL A + +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRI 254
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
G + + +N + + D+ + G LK A M ++ + W +++ A
Sbjct: 255 GKEIHGYAMRA-GFDSLVNIATALVDMYAKCGSLKTARLLFDGM-LERNVVSWNSMIDA 311
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 84/154 (54%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S TI WN+ I +AL F +M+ ++P+ T+ + A A+LS +++
Sbjct: 399 QSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG ++++ ++FV T +VDMYAKC + A +FD M +R V +WNAMI G+ G
Sbjct: 459 WIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L LF M+ I+ + VT + + A H+
Sbjct: 519 IGKAALELFEEMQKGTIRPNGVTFLSVISACSHS 552
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL + L+ ++ + GS+ +A +F + +K V + TM+ G A + +AL F
Sbjct: 64 GLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFF 123
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
+M + ++ P F +L+ C L G L+ K + +L + + ++ +
Sbjct: 124 VRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK-SGFSLDLFAMTGLENMYAK 182
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ EA MP + D W T++
Sbjct: 183 CRQVHEARKVFDRMP-ERDLVSWNTIV 208
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 329/567 (58%), Gaps = 3/567 (0%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
++P+ T+P + KAC+ L Y +M+H H++KS F D+ V ++ V MYAKC+ + A
Sbjct: 102 LKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAI 161
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
KLFD+MP+RDVASWN +I + Q G EK L LF M++ G + D VT+ + +
Sbjct: 162 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 221
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L K +H + G D V + + Y KC L+MA+ VF I+ + VVSWNS+
Sbjct: 222 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQR--KNVVSWNSM 279
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G + + +R M +G RP +TT+ S+L +C L G+ +H + I
Sbjct: 280 IAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV 339
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ D+ V ++LI +Y KCG+I SA +F M VSW MISGY + G EAL +F
Sbjct: 340 EADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTD 399
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M AG PD +T S++ C Q LE GK N+ L+ N +V AL+DMY+KCG+
Sbjct: 400 MRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGA 459
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ +A +F LPE+ VSWT+MIA +G+ EAL LF +M + D +P++VTFLA+L A
Sbjct: 460 VDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSA 519
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP-IKSDA 528
C+HAG +++G YFN M Y P + HYSC+ DLLGR G+L+EA + +Q P I+ D
Sbjct: 520 CSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV 579
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM 588
G+ TL AC +H+ +++GE + L E +P + Y+ ++N+YA +WD V +R +
Sbjct: 580 GLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKI 639
Query: 589 KRNQVKKFPGQSLVHINGKTCTFTVED 615
K +KK PG S + + + F VED
Sbjct: 640 KELGLKKNPGCSWIEVGKRIHPFVVED 666
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 257/511 (50%), Gaps = 17/511 (3%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR- 118
+ K C ++IH IV ++I + +++++Y C A +F + +
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 119 DVASWNAMIVGFAQ-MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
D+ WN ++ + F+E + + ++ D T + +A + K V
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H+ I G DV V ++ + YAKCN + A +F + E R V SWN++I C Y D
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE--RDVASWNNVI-SCYYQD 185
Query: 238 -KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ + +L + M GF+PD T+ +++SSC L +G+ +H + GF LD V
Sbjct: 186 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+ L+ MY KCG ++ A+ +F+ + + VSW +MI+GY+ KGD + LF M+ G
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 305
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P L T+ S++ C +S L+LGK+ Y ++ ++ V ++LID+Y KCG+IG A +
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 365
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F +P+ VVSW MI+G G ++EAL +F M + ++P+ +TF +VL AC+ L
Sbjct: 366 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 425
Query: 477 EKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
EKG N + + E+N + D+ + G + EAL +P + D W ++
Sbjct: 426 EKGKEIHNF---IIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWTSM 481
Query: 535 LCACKIHRNIEIGEYVAYRLFE-LEPHSAAP 564
+ A H + A +LFE ++ A P
Sbjct: 482 IAAYGSHGQ----AFEALKLFEKMQQSDAKP 508
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 213/398 (53%), Gaps = 9/398 (2%)
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D ++ L + I +K+L K +H + +G+ ++++C + I+ Y C+ + A+LVF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN-FYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
+ IE L + WN ++ CT F + L F+R + + +PD T S+L +C
Sbjct: 62 QTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+ G++VH+H I GF +DV V+++ + MY+KC + A LFD M +R SW +IS
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y Q G ++AL LF M+ +G PD VT+ ++IS C + LE GK G
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+ V +AL+DMY KCG + A+E+F + K VVSW +MIAG +L G+ ++LF +M
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD 300
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
E +RP T ++L AC+ + L+ G + + +V ++ S + DL + G +
Sbjct: 301 EEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCGNI 359
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
A + Q+MP K++ W + I +++G Y+
Sbjct: 360 GSAENVFQNMP-KTNVVSWNVM-----ISGYVKVGSYL 391
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ + WN I V +AL++F M+K ++P+ +TF + AC++L+ + I
Sbjct: 372 TNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI 431
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I++S + V ++DMYAKC +D A +F+++P+RD SW +MI + G
Sbjct: 432 HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQA 491
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L LF M+ + D VT + + A HA
Sbjct: 492 FEALKLFEKMQQSDAKPDKVTFLAILSACSHA 523
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/558 (40%), Positives = 330/558 (59%), Gaps = 8/558 (1%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFD 113
+F ++ C+ L D IH +V + ++ + T ++ + A C +D A K+FD
Sbjct: 31 SFNYLLNCCSSLPDL---SRIHALVVTNGCGQNLLLSTKLI-ITACCLAPTMDYARKMFD 86
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
+MP RDV WN +I G+A G E+ L L+ NM G+ D T + ++ L
Sbjct: 87 QMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALRE 146
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
K VH + G D+DV V ++ ++ Y++ + ELVF E +R +VSW ++I G
Sbjct: 147 GKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFG--EMVVRNIVSWTAVIAGY 204
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
F + L +R M+ G +P+ T+VS+L +C E L G+L+H +GI G D DV
Sbjct: 205 VQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDV 264
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
S+ N LI++Y KCG++++AR LFDGM + VSW AMI+ Y Q A++LF M+A
Sbjct: 265 SLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAE 324
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
D +T++S+IS C GAL G+W GL+ NV + NALIDMY+KCG+I A
Sbjct: 325 KVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLA 384
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
RE+F LP ++VVSWT+MI CA +G +AL LF +M + ++PN TF AV AC H+
Sbjct: 385 REVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHS 444
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G +E+G +F M + Y + P + H +CM DLLGR G L EA +F+ MP++ D +WG
Sbjct: 445 GLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGA 504
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL +C+IH N+E+ E VA +LF L+P + YV M+NIYA GRW+ A LR +M+ ++
Sbjct: 505 LLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEEREL 564
Query: 594 KKFPGQSLVHINGKTCTF 611
KK PG SLV +N + TF
Sbjct: 565 KKIPGHSLVEVNRRFHTF 582
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 244/449 (54%), Gaps = 6/449 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR D +AL L+ M + P+N TFPF+ ++CA LS + +H +IV
Sbjct: 96 WNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIV 155
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F SD+FVQ+++V MY++ +F +M R++ SW A+I G+ Q + ++ L
Sbjct: 156 KHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLG 215
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G Q + VT++ + A + L+L K +H +GI +GVD DVS+ N I+ Y
Sbjct: 216 VFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYG 275
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +++ A +F G+ ++ +VSWN++I + +++ +R M + D T+
Sbjct: 276 KCGNVETARSLFDGMV--VQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITM 333
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS++S+C AL GR +H G +++VS+ N LI MY+KCG+ID AR +F+ +
Sbjct: 334 VSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPC 393
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
R+ VSWT+MI A G ++AL+LF M+ G P+ T ++ + C SG +E G K
Sbjct: 394 RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKH 453
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
F++ + V C ++D+ + GS+ +A E +P E V W ++ C ++
Sbjct: 454 FESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHS 513
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
A + ++ LD P VTF ++
Sbjct: 514 NLELAELVAEKLFLLD--PQTVTFYVLMS 540
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 150/328 (45%), Gaps = 4/328 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I W + I V + L +FR M + +PN +T + ACA L ++IH
Sbjct: 193 NIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIH 252
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ +K D+ + ++ +Y KC ++ A LFD M +++ SWNAMI + Q
Sbjct: 253 GYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGA 312
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF M+ + D++T++ + A L+ + +H G++ +VS+ N I
Sbjct: 313 NAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALI 372
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC ++ +A VF + R+VVSW S+IG C +D+L + M +G +P+
Sbjct: 373 DMYAKCGNIDLAREVFERLP--CRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPN 430
Query: 258 VTTVVSLLSSCVCPEALVQGRL-VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T ++ ++C + +GR S Y V ++ + + G + A
Sbjct: 431 SFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFI 490
Query: 317 DGMCDRTRVS-WTAMISGYAQKGDLDEA 343
D M VS W A++ +L+ A
Sbjct: 491 DKMPVEPDVSVWGALLGSCRIHSNLELA 518
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/594 (37%), Positives = 334/594 (56%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + E + +++ LF++M+K I N+ TF I K A L + IHG +
Sbjct: 521 WNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVY 580
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S V +++ Y K +D A+KLFD++ DRDV SWN+MI G GF L
Sbjct: 581 KLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALE 640
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M ++ + D T++ A + LSL +++H G+ +V NT + Y+
Sbjct: 641 FFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYS 700
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L A F + G +TVVSW S+I +DD++ + M G PDV ++
Sbjct: 701 KCGNLNDAIQAFEKM--GQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSM 758
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C C +L +GR VH++ L + V N L+ MY+KCG ++ A +F +
Sbjct: 759 TSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPV 818
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW MI GY++ +EAL+LF M+ PD +T+ ++ CG ALE+G+
Sbjct: 819 KDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR-PDGITMACLLPACGSLAALEIGRGI 877
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G + V NALIDMY KCGS+ AR LF +PEK +++WT MI+GC ++G
Sbjct: 878 HGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLG 937
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA+ F +M ++P+ +TF ++L AC+H+G L +GWG+FN M + P+L HY+C
Sbjct: 938 NEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYAC 997
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLL R G L +A + +++MPIK DA IWG LLC C+IH ++E+ E VA +FELEP +
Sbjct: 998 MVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDN 1057
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A YV +ANIYA +W+ V LR + + +KK PG S + + GK TF D
Sbjct: 1058 AGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSAD 1111
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/540 (29%), Positives = 273/540 (50%), Gaps = 10/540 (1%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N++I + + + A+ L R +K++++ N + I + CA+ +M+H I
Sbjct: 422 NTKICKFCEVGDLRNAVELLRMSQKSELDLN--AYSSILQLCAEHKCLQEGKMVHSVISS 479
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK-MPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + + +V MY C L ++FD + D V WN M+ +A++G + +
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ +GI + T + + + K +H +G + +V N+ I+ Y
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYF 599
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K ++ A +F E G R VVSWNS+I GC +L F+ M+ D+ T+
Sbjct: 600 KSGEVDSAHKLFD--ELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATL 657
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V+ +++C +L GR +H G+ F +V NTL+ MYSKCG+++ A F+ M
Sbjct: 658 VNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQ 717
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+T VSWT++I+ Y ++G D+A+RLF+ ME+ G PD+ ++ S++ C +L+ G+
Sbjct: 718 KTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDV 777
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
NY + + V NAL+DMY+KCGS+ +A +F +P K +VSW TMI G + N
Sbjct: 778 HNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLP 837
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL LF +M + + RP+ +T +L AC LE G G + + + EL+ +
Sbjct: 838 NEALKLFAEMQK-ESRPDGITMACLLPACGSLAALEIGRGIHGCILR-NGYSSELHVANA 895
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH--RNIEIGEYVAYRLFELEP 559
+ D+ + G L A +P K D W ++ C +H N I + R+ ++P
Sbjct: 896 LIDMYVKCGSLVHARLLFDMIPEK-DLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKP 954
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 5/331 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W S I V + A+ LF M+ + P+ + + ACA + + +H
Sbjct: 719 TVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVH 778
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I K+ + V ++DMYAKC ++ AY +F ++P +D+ SWN MI G+++
Sbjct: 779 NYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPN 838
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF M+ + D +T+ L A L + + +H + G +++ V N I
Sbjct: 839 EALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALI 897
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC L A L+F I E + +++W +I GC ++++ ++ M G +PD
Sbjct: 898 DMYVKCGSLVHARLLFDMIPE--KDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPD 955
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T S+L +C L +G +S + + ++ + ++ G++ A L
Sbjct: 956 EITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLI 1015
Query: 317 DGMCDRTRVS-WTAMISGYAQKGDLDEALRL 346
+ M + + W A++ G D++ A ++
Sbjct: 1016 ETMPIKPDATIWGALLCGCRIHHDVELAEKV 1046
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/599 (38%), Positives = 339/599 (56%), Gaps = 5/599 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFI--AKACAKLSDFLYSQMI 76
I W I +A LF +M++N PN T+ I A A A S + +++
Sbjct: 386 IFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVV 445
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H H ++ F SD+ + ++ MYAKC +D A +FD M DRDV SWNAM+ G AQ G
Sbjct: 446 HKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCG 505
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ +F M+ G+ D T + L L + VH + G+ +D V + +
Sbjct: 506 HEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAF 565
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I Y +C + A L+F + +R V +WN++IGG ++L+ + M +GF P
Sbjct: 566 IHMYIRCGSIDDARLLFDKLS--VRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIP 623
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TT +++LS+ V EAL + VHSH G +D+ V N L+ YSKCG++ A+ +F
Sbjct: 624 DATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVF 682
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +R +WT MI G AQ G +A F M G VPD T +S++S C +GALE
Sbjct: 683 DDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALE 742
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
K N+A S GL ++ V NAL+ MY+KCGSI DAR +F + E+ V SWT MI G A
Sbjct: 743 WVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLA 802
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G +EALD F +M +PN +++AVL AC+HAG +++G F MT+ Y + P +
Sbjct: 803 QHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTM 862
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY+CM DLLGR G L+EA F+ +MPI+ D WG LL AC + N+E+ E+ A +
Sbjct: 863 EHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLK 922
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P SA+ YV ++NIYA G+W+ +R+MM+R ++K PG+S + ++ + +F V D
Sbjct: 923 LKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGD 981
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 243/458 (53%), Gaps = 4/458 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + A A+ ++ +M++ +PN +T+ I KAC + + + IH HI+
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHII 246
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S F SD+ V+T +V+MY KC ++ A +FDKM +R+V SW MI G A G ++
Sbjct: 247 QSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 306
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ G + T + + A A L +K VHS ++ G+ D+ V N + YA
Sbjct: 307 LFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYA 366
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + A +VF G+ E R + SW +IGG + ++ + + M +G P++TT
Sbjct: 367 KSGSIDDARVVFDGMTE--RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTY 424
Query: 262 VSLL--SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+S+L S+ AL ++VH H GF D+ + N LI MY+KCG ID AR +FDGM
Sbjct: 425 LSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM 484
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
CDR +SW AM+ G AQ G EA +F M+ G VPD T LS+++ G + ALE
Sbjct: 485 CDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVN 544
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+A GL + V +A I MY +CGSI DAR LF L + V +W MI G A
Sbjct: 545 EVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQR 604
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
EAL LF QM P+ TF+ +L A LE
Sbjct: 605 CGREALSLFLQMQREGFIPDATTFINILSANVDEEALE 642
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 240/435 (55%), Gaps = 4/435 (0%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
A A+ + + + I ++ ++ I + C K D L ++ +H I+KS +++V
Sbjct: 99 AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANK 158
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++ +Y +C RL CA ++FDK+ +++ W MI G+A+ G E + ++ MR Q +
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+T + + +A +L K +H+ I G +DV V ++ Y KC ++ A+L+F
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFD 278
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ E R V+SW +IGG + + ++ + + M +GF P+ T VS+L++ AL
Sbjct: 279 KMVE--RNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL 336
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+ VHSH ++ G LD+ V N L+ MY+K G ID AR +FDGM +R SWT MI G
Sbjct: 337 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGL 396
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI--SGCGQSGALELGKWFDNYACSGGLKD 392
AQ G EA LF M+ G +P+L T LS++ S + ALE K +A G
Sbjct: 397 AQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFIS 456
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
++ + NALI MY+KCGSI DAR +F + ++ V+SW M+ G A NG EA +F QM
Sbjct: 457 DLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQ 516
Query: 453 ELDLRPNRVTFLAVL 467
+ L P+ T+L++L
Sbjct: 517 QEGLVPDSTTYLSLL 531
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 175/320 (54%), Gaps = 2/320 (0%)
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
GI D + + + Q + + + L K VH I G++ ++ V N + Y +C L+ A
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCA 172
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
VF + + + + W ++IGG +D++ Y M + +P+ T +S+L +C
Sbjct: 173 RQVFDKLLK--KNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
CP L G+ +H+H I GF DV V L++MY KCG I+ A+ +FD M +R +SWT
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
MI G A G EA LF M+ G +P+ T +S+++ +GALE K ++A + G
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L ++ V NAL+ MY+K GSI DAR +F + E+ + SWT MI G A +G EA LF
Sbjct: 351 LALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFL 410
Query: 450 QMMELDLRPNRVTFLAVLQA 469
QM PN T+L++L A
Sbjct: 411 QMQRNGCLPNLTTYLSILNA 430
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 126/237 (53%)
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
D++ + + G D + V++L C+ E ++ + VH I G + ++ V N L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
+Y +CG + AR +FD + + WT MI GYA+ G ++A+R++ M P+ +
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T LS++ C L+ GK + G + +V V AL++MY KCGSI DA+ +F +
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
E+ V+SWT MI G A G EA LF QM PN T++++L A AG LE
Sbjct: 281 VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/599 (38%), Positives = 342/599 (57%), Gaps = 5/599 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD--FLYSQMI 76
I W I +A LF +M++ PN T+ I A A S + + +
Sbjct: 197 IFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEV 256
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H H K+ F SD+ V ++ MYAKC +D A +FD M DRDV SWNAMI G AQ G
Sbjct: 257 HKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCG 316
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ +F M+ G D T + L + +K VH + +G+ +D+ V + +
Sbjct: 317 HEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAF 376
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y +C + A+L+F + +R V +WN++IGG ++L+ + M +GF P
Sbjct: 377 VHMYIRCGSIDDAQLIFDKL--AVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFP 434
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TT V++LS+ V EAL + VHS+ I G +D+ V N L+ MY+KCG+ A+ +F
Sbjct: 435 DATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVF 493
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +R +WT MISG AQ G EA LF M G VPD T +S++S C +GALE
Sbjct: 494 DDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
K ++A + GL ++ V NAL+ MY+KCGS+ DAR +F + E+ V SWT MI G A
Sbjct: 554 WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLA 613
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G ++ALDLF +M +PN +F+AVL AC+HAG +++G F +T+ Y + P +
Sbjct: 614 QHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTM 673
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY+CM DLLGR G+L+EA F+ +MPI+ WG LL AC + N+E+ E+ A +
Sbjct: 674 EHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLK 733
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P SA+ YV ++NIYA G W+ +R+MM+R ++K PG+S + ++ + +F V D
Sbjct: 734 LKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGD 792
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 234/437 (53%), Gaps = 4/437 (0%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
A A+ ++ +M++ +PN +T+ I KAC + + IH HI++S F SD+ V+T
Sbjct: 11 AEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETA 70
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
+V+MY KC +D A +FDKM +R+V SW MI G A G ++ F M+ G +
Sbjct: 71 LVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPN 130
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + + A A L +K VHS ++ G+ D+ V N + YAK + A +VF
Sbjct: 131 SYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFD 190
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL--SSCVCPE 272
G+ E R + SW +IGG + ++ + + M G P++TT +S+L S+
Sbjct: 191 GMVE--RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTG 248
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL + VH H GF D+ V N LI MY+KCG ID AR +FDGMCDR +SW AMI
Sbjct: 249 ALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIG 308
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G AQ G EA +F M+ G VPD T LS+++ +GA E K +A GL
Sbjct: 309 GLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVS 368
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
++ V +A + MY +CGSI DA+ +F L + V +W MI G A EAL LF QM
Sbjct: 369 DLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMR 428
Query: 453 ELDLRPNRVTFLAVLQA 469
P+ TF+ +L A
Sbjct: 429 REGFFPDATTFVNILSA 445
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 230/458 (50%), Gaps = 5/458 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I +A F +M++ PN+ T+ I A A + + +H H V
Sbjct: 99 WTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAV 158
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D+ V +V MYAK +D A +FD M +RD+ SW MI G AQ G ++
Sbjct: 159 NAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFS 218
Query: 142 LFYNMRLVGIQADFVTVMGLTQAA--IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
LF M G + T + + A+ L +K VH G +D+ V N I
Sbjct: 219 LFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHM 278
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC + A LVF G+ + R V+SWN++IGG ++ + M +GF PD T
Sbjct: 279 YAKCGSIDDARLVFDGMCD--RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDST 336
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T +SLL++ V A + VH H + G D+ V + + MY +CG ID A+ +FD +
Sbjct: 337 TYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKL 396
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R +W AMI G AQ+ EAL LF M G PD T ++++S ALE K
Sbjct: 397 AVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVK 456
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+YA GL D + V NAL+ MY+KCG+ A+++F + E+ V +WT MI+G A +G
Sbjct: 457 EVHSYAIDAGLVD-LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHG 515
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
EA LF QM+ + P+ T++++L AC G LE
Sbjct: 516 CGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 193/354 (54%), Gaps = 4/354 (1%)
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MI G+A+ G+ E + ++ MR G Q + +T + + +A L K +H+ I G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+DV V ++ Y KC + A+L+F + E R V+SW +IGG + + ++ +
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVE--RNVISWTVMIGGLAHYGRGQEAFHR 118
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M +GF P+ T VS+L++ AL + VHSH ++ G LD+ V N L+ MY+K
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
G ID AR +FDGM +R SWT MI G AQ G EA LF ME G +P+L T LS+
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238
Query: 366 I--SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ S +GALE K +A G ++ V NALI MY+KCGSI DAR +F + ++
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
V+SW MI G A NG EA +F +M + P+ T+L++L G E
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 330/574 (57%), Gaps = 2/574 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
A+ F RM+ + + P F ++ K C +D + IH ++ + F S++F T +V+
Sbjct: 159 AVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVN 218
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MYAKC ++ AYK+FD+MP+RD+ WN +I G+AQ GF + L L M+ G + D +T
Sbjct: 219 MYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSIT 278
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ + A L + +S+H + + G ++ V+V + Y+KC + A L+F +
Sbjct: 279 IVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMT 338
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+TVVSWNS+I G ++ ++ M+ + TV+ L +C + QG
Sbjct: 339 G--KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG 396
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R VH DVSV+N+LISMYSKC +D A +F+ + +T VSW AMI GYAQ
Sbjct: 397 RFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQN 456
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G ++EA+ F M+ PD T++S+I + L KW L NV V
Sbjct: 457 GRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVA 516
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
AL+DMY+KCG++ AR+LF + E+ V +W MI G +G AL+LF +M + ++
Sbjct: 517 TALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIK 576
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VTFL VL AC+H+G +E+G+ YF M K Y + P ++HY M DLLGR +L EA D
Sbjct: 577 PNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWD 636
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F+Q MPI+ ++G +L AC+IH+N+E+GE A R+F+L+P +V +ANIYA
Sbjct: 637 FIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASM 696
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
WD VA +RT M++ ++K PG S+V + + TF
Sbjct: 697 WDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTF 730
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 212/419 (50%), Gaps = 4/419 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I AL L RM++ P+++T I A A + + IHG+ +
Sbjct: 244 WNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSM 303
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F S + V T +VDMY+KC + A +FD+M + V SWN+MI G+ Q G +
Sbjct: 304 RAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAME 363
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M ++ VTVMG A + + VH + + +DVSV N+ IS Y+
Sbjct: 364 IFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYS 423
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A +F ++ +T+VSWN++I G + +++++++ M +PD T+
Sbjct: 424 KCKRVDIAAEIFENLQH--KTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTM 481
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS++ + L Q + +H I D +V V L+ MY+KCG + +AR LFD M +
Sbjct: 482 VSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDE 541
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
R +W AMI GY G AL LF M+ P+ VT L ++S C SG +E G ++
Sbjct: 542 RHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQY 601
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
F + GL+ + A++D+ + + +A + +P E + + M+ C ++
Sbjct: 602 FGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIH 660
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 156/283 (55%), Gaps = 2/283 (0%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+S + K L A VF+ IE+ + + +++++ G DD+++F+ M YDG RP
Sbjct: 116 VSLFCKFGSLHEAARVFQPIEDKIDEL--YHTMLKGYARNSSLDDAVSFFCRMRYDGVRP 173
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
V LL C L +G+ +H I GF +V + +++MY+KC ++ A +F
Sbjct: 174 VVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +R V W +ISGYAQ G AL L M+ G+ PD +T++S++ G+L
Sbjct: 234 DRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+G+ Y+ G + V V AL+DMYSKCGS+G AR +F + KTVVSW +MI G
Sbjct: 294 IGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYV 353
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG+ A+++F +MM+ + VT + L AC G +E+G
Sbjct: 354 QNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG 396
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS I V + A+ +F++M +E N+T ACA L D + +H
Sbjct: 341 TVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVH 400
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + SD+ V +++ MY+KC R+D A ++F+ + + + SWNAMI+G+AQ G +
Sbjct: 401 KLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRIN 460
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + F M+L I+ D T++ + A L K +H I +D +V V +
Sbjct: 461 EAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALV 520
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + A +F ++E R V +WN++I G +L + M + +P+
Sbjct: 521 DMYAKCGAVHTARKLFDMMDE--RHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPN 578
Query: 258 VTTVVSLLSSC 268
T + +LS+C
Sbjct: 579 EVTFLCVLSAC 589
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+S++ K G + A +F + D+ + M+ GYA+ LD+A+ F M G P
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPV 174
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ ++ CG + L GK G NV +++MY+KC + +A ++F
Sbjct: 175 VYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFD 234
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+PE+ +V W T+I+G A NG AL+L +M E RP+ +T +++L A G L
Sbjct: 235 RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 479 G 479
G
Sbjct: 295 G 295
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 85/154 (55%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ T+ WN+ I ++A+ F +M+ +I+P++ T + A A+LS ++
Sbjct: 439 QHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAK 498
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG ++++ ++FV T +VDMYAKC + A KLFD M +R V +WNAMI G+ G
Sbjct: 499 WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHG 558
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L LF M+ I+ + VT + + A H+
Sbjct: 559 LGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL + L+ ++ K GS+ +A +F + +K + TM+ G A N +A+ F
Sbjct: 104 GLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFF 163
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+M +RP F +L+ C L KG
Sbjct: 164 CRMRYDGVRPVVYNFTYLLKVCGDNADLRKG 194
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/574 (36%), Positives = 335/574 (58%), Gaps = 2/574 (0%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
FR + + P+N T PF+ +AC L + ++IH + K D FV +VDMY K
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C ++ A LFDKM +RD+ +W MI G+A+ G + L LF MR G+ D V ++ +
Sbjct: 78 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A + + + + DV + I YAKC ++ A +F +EE +
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE--K 195
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
V+SW+++I Y + +L+ +R M+ G PD T+ SLL +C + L GRL+H
Sbjct: 196 NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIH 255
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+G DLD V L+ MY KC +I+ ARFLFD M +R V+WT MI GYA+ G+ +
Sbjct: 256 HIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNAN 315
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
E+L LF M G VPD V +++++ C + GA+ + D+Y + +V++ A+I
Sbjct: 316 ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMI 375
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DM++KCG + ARE+F + EK V+SW+ MIA +G+ +ALDLF M+ + PN++
Sbjct: 376 DMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKI 435
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
T +++L AC+HAG +E+G +F+LM + Y V ++ HY+C+ DLLGR G+L EAL ++S
Sbjct: 436 TLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIES 495
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
M ++ D G+WG L AC+ H+++ + E A L EL+P + Y+ ++NIYA GRW+ V
Sbjct: 496 MTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDV 555
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A R +M + ++KK PG + + ++ K+ F+V D
Sbjct: 556 AKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGD 589
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 228/439 (51%), Gaps = 12/439 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + +A+++L+LF +M++ + P+ + + ACAKL +++I +I
Sbjct: 99 WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 158
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+ + T M+DMYAKC ++ A ++FD+M +++V SW+AMI + G K L
Sbjct: 159 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 218
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G+ D +T+ L A K+L + + +H G+D D VC + Y
Sbjct: 219 LFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYG 278
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +++ A +F + E R +V+W +IGG ++SL + M +G PD +
Sbjct: 279 KCREIEDARFLFDKMPE--RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAM 336
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V+++ +C A+ + R + + F LDV + +I M++KCG ++SAR +FD M +
Sbjct: 337 VTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE 396
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SW+AMI+ Y G +AL LF M +G +P+ +T++S++ C +G +E G F
Sbjct: 397 KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRF 456
Query: 382 -----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
++Y+ +K V +D+ + G + +A +L ++ EK W + C
Sbjct: 457 FSLMWEDYSVRADVKHYTCV----VDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 512
Query: 436 ALNGEFVEALDLFHQMMEL 454
+ + V A ++EL
Sbjct: 513 RTHKDVVLAEKAATSLLEL 531
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 217/417 (52%), Gaps = 6/417 (1%)
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
M+ GFA++G F + G + D T+ + +A K+L + + +H G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+D D VC + Y KC +++ A +F ++E R +V+W +IGG K ++SL
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQE--RDLVTWTVMIGGYAECGKANESLVL 118
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M +G PD +V+++ +C A+ + R++ + F LDV + +I MY+K
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 178
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG ++SAR +FD M ++ +SW+AMI+ Y G +AL LF M ++G +PD +T+ S+
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ C L++G+ + GL + VC AL+DMY KC I DAR LF +PE+ +
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN- 484
V+WT MI G A G E+L LF +M E + P++V + V+ AC G + K +
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ K +Q++ L + M D+ + G ++ A + M K+ W ++ A H
Sbjct: 359 IQRKKFQLDVILG--TAMIDMHAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYH 412
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/575 (36%), Positives = 327/575 (56%), Gaps = 2/575 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
KAL F RM+ +D+EP F ++ K C ++ + IHG +VKS F D+F T +
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+MYAKC +++ A K+FD+MP+RD+ SWN ++ G++Q G L + +M ++ F+
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + A + +S+ K +H + + G D+ V++ + YAKC L+ A +F G+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E R VVSWNS+I + +++ ++ M+ +G +P +V+ L +C L +
Sbjct: 298 LE--RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +H + G D +VSV+N+LISMY KC ++D+A +F + RT VSW AMI G+AQ
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +AL F M + PD T +S+I+ + KW L NV V
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 475
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
AL+DMY+KCG+I AR +F + E+ V +W MI G +G AL+LF +M + +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
+PN VTFL+V+ AC+H+G +E G F +M + Y + ++HY M DLLGR G+L EA
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
DF+ MP+K ++G +L AC+IH+N+ E A RLFEL P +V +ANIY
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
W+ V +R M R ++K PG S+V I + +F
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 213/426 (50%), Gaps = 7/426 (1%)
Query: 46 KKNDIEPNNLTFP--FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD 103
++N I N P + + C+ L + + I + K+ + + F QT +V ++ +
Sbjct: 27 ERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYG 83
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+D A ++F+ + + ++ M+ GFA++ L+K L F MR ++ L +
Sbjct: 84 SVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLK 143
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
L + K +H + G D+ + YAKC + A VF + E R +
Sbjct: 144 VCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE--RDL 201
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWN+I+ G + +L + M + +P T+VS+L + + G+ +H +
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY 261
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ GFD V++ L+ MY+KCG +++AR LFDGM +R VSW +MI Y Q + EA
Sbjct: 262 AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+ +F M G P V+V+ + C G LE G++ + GL NV V N+LI M
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y KC + A +F L +T+VSW MI G A NG ++AL+ F QM ++P+ T+
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 464 LAVLQA 469
++V+ A
Sbjct: 442 VSVITA 447
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 144/283 (50%), Gaps = 2/283 (0%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+S + + + A VF I+ L V +++++ G D +L F+ M YD P
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLN--VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
V LL C L G+ +H + GF LD+ + L +MY+KC ++ AR +F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +R VSW +++GY+Q G AL + +M P +T++S++ +
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+GK YA G V + AL+DMY+KCGS+ AR+LF + E+ VVSW +MI
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
N EA+ +F +M++ ++P V+ + L AC G LE+G
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+S++ + G +D A +F+ + + V + M+ G+A+ DLD+AL+ F M P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ ++ CG L +GK G ++ L +MY+KC + +AR++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+PE+ +VSW T++AG + NG AL++ M E +L+P+ +T ++VL A + +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
G + + +N + + D+ + G L+ A M ++ + W +++ A
Sbjct: 255 GKEIHGYAMR-SGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDA 311
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S T+ WN+ I AL F +M+ ++P+ T+ + A A+LS +++
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG +++S ++FV T +VDMYAKC + A +FD M +R V +WNAMI G+ G
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
F + L LF M+ I+ + VT + + A H+
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/600 (37%), Positives = 336/600 (56%), Gaps = 4/600 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S I WN I E +++ LF++M + I+PN+ TF I K A ++ + +
Sbjct: 214 SKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQV 273
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG I K F S V +++ Y ++ CA KLFD++ DRDV SWN+MI G+ + G
Sbjct: 274 HGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLD 333
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNT 195
++ + +F M + G+ D T++ + A + L L K +HS+ I +D +V NT
Sbjct: 334 DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNT 393
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y+KC DL A VF ++E +TVVSW S+I G D ++ + M G
Sbjct: 394 LLDMYSKCGDLNSAIRVFERMDE--KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PDV V S+L++C L G++VH + + + V N L MY+KCG + A +
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDV 511
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F M + +SW MI GY + +EAL LF M+ + PD TV ++ C AL
Sbjct: 512 FSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESK-PDGTTVACILPACASLAAL 570
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ G+ YA G ++ V NA++DMY KCG + AR LF +P K +VSWT MIAG
Sbjct: 571 DKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGY 630
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
++G EA++ F+QM + P+ V+F+++L AC+H+G L++GW FN+M K Q+ P
Sbjct: 631 GMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPN 690
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
L HY+CM DLL R G L +A F+++MPIK DA IWG LLC C+IH ++++ E VA R+F
Sbjct: 691 LEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIF 750
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
ELEP + YV +ANIYA +W+ V LR + + +KK PG S + I GK F D
Sbjct: 751 ELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGD 810
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 223/421 (52%), Gaps = 4/421 (0%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
I + CA+ + + I S D + +V MY KC L +FDK+ +
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
+ WN MI ++ G + + LF M +GI+ + T + + + + VH
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+G ++ +V N+ IS Y ++ A+ +F + + R V+SWNS+I G
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD--RDVISWNSMISGYVKNGLD 333
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINT 298
D + + M+ G D+ T+V++ +C L+ G+++HS+ I D +V NT
Sbjct: 334 DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNT 393
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+ MYSKCGD++SA +F+ M ++T VSWT+MI+GY ++G D A++LF M++ G VPD
Sbjct: 394 LLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPD 453
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ V S+++ C +G L+ GK +Y L+ N V NAL DMY+KCGS+ DA ++F
Sbjct: 454 VYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFS 513
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ +K V+SW TMI G N EAL LF + M+ + +P+ T +L AC L+K
Sbjct: 514 HMKKKDVISWNTMIGGYTKNSLPNEALTLFAE-MQRESKPDGTTVACILPACASLAALDK 572
Query: 479 G 479
G
Sbjct: 573 G 573
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D+ S+L C +++ GR V S G +D + L+ MY KCGD+ R +F
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + + W MIS Y+ G+ E++ LF M G P+ T S++ +E
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ C G V N+LI Y + A++LF L ++ V+SW +MI+G
Sbjct: 269 EGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYV 328
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
NG +++F +M+ + + T + V AC + G L G + K ++ E+
Sbjct: 329 KNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREV 388
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
+ + D+ + G L A+ + M K+
Sbjct: 389 RFNNTLLDMYSKCGDLNSAIRVFERMDEKT 418
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/643 (35%), Positives = 343/643 (53%), Gaps = 41/643 (6%)
Query: 12 KIYRSSTINQ---WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+++R T+ W+S I N KA F RM +IEPN +TF I KAC S
Sbjct: 112 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYS 171
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IH + +D+ V T ++ MY+KC + A ++F KM +R+V SW A+I
Sbjct: 172 ILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQ 231
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
AQ L + L+ M GI + VT + L + + L+ + +HS G++
Sbjct: 232 ANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLET 291
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG---CTYGDK--FDDSL 243
D+ V N I+ Y KCN ++ A +F + + R V+SW+++I G Y DK D+
Sbjct: 292 DMIVANALITMYCKCNSVQEAREIFDRMSK--RDVISWSAMIAGYAQSGYKDKESIDEVF 349
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN------ 297
M +G P+ T +S+L +C AL QGR +H+ GF+LD S+
Sbjct: 350 QLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMY 409
Query: 298 -------------------------TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+ +SMY KCGD+ SA +F M R VSW MI+
Sbjct: 410 AKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIA 469
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GYAQ GD+ + L +M+A G PD VTV++++ CG LE GK A GL+
Sbjct: 470 GYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLES 529
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+ +V +LI MYSKCG + +AR +F + + V+W M+AG +G+ +EA+DLF +M+
Sbjct: 530 DTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRML 589
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ + PN +T AV+ AC+ AG +++G F +M + +++ P HY CM DLLGR G+L
Sbjct: 590 KERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRL 649
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIY 572
+EA +F+QSMP + D +W LL ACK H N+++ E A+ + ELEP A+ Y+ ++NIY
Sbjct: 650 QEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIY 709
Query: 573 ALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A GRWD +R +M +KK G+S + I+G+ TF ED
Sbjct: 710 AQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAED 752
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/479 (31%), Positives = 245/479 (51%), Gaps = 38/479 (7%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ L +K+ + N+ T+ + + CAK F +M+H + + DI++ +++
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+ Y+K + + A ++F +M RDV +W++MI +A K F M I+ + +
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + + +A + L + +H+ +G++ DV+V I+ Y+KC ++ +A VF +
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E R VVSW +II K +++ Y M+ G P+ T VSLL+SC PEAL +
Sbjct: 219 TE--RNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +HSH G + D+ V N LI+MY KC + AR +FD M R +SW+AMI+GYAQ
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336
Query: 337 KG-----DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW----------- 380
G +DE +L M G P+ VT +S++ C GALE G+
Sbjct: 337 SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFE 396
Query: 381 ---------FDNYACSGGLKD-----------NVMVCNALIDMYSKCGSIGDARELFYAL 420
F+ YA G + + NV+ + + MY KCG + A ++F +
Sbjct: 397 LDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEM 456
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
P + VVSW MIAG A NG+ V+ +L M +P+RVT + +L+AC LE+G
Sbjct: 457 PTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG 515
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+ G L EA++L ++ G + + T +I C ++ E GK G++ ++
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ N+LI+ YSK + A ++F + + VV+W++MIA A N +A D F +M + +
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ PNR+TFL++L+AC + LEKG + + K + ++ + + + + G++ A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRK-IHTIVKAMGMETDVAVATALITMYSKCGEISVA 211
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ M ++ W ++ A HR + A+ L+E
Sbjct: 212 CEVFHKMTERNVVS-WTAIIQANAQHRKLN----EAFELYE 247
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/645 (35%), Positives = 344/645 (53%), Gaps = 41/645 (6%)
Query: 10 LNKIYRSSTINQ---WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK 66
+ +++R T+ W+S I N KA F RMK +IEPN +TF I KAC
Sbjct: 132 VEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNN 191
Query: 67 LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
S ++ IH + S +D+ V T ++ MY+KC + A ++F KM +R+V SW A+
Sbjct: 192 YSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAI 251
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I AQ L + L+ M GI + VT + L + + L+ + +HS G+
Sbjct: 252 IQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 311
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG---CTYGDK--FDD 241
+ DV V N I+ Y KCN ++ A F + + R V+SW+++I G Y DK D+
Sbjct: 312 ETDVVVANALITMYCKCNCIQDARETFDRMSK--RDVISWSAMIAGYAQSGYQDKESLDE 369
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN---- 297
M +G P+ T +S+L +C AL QGR +H+ GF+ D S+
Sbjct: 370 VFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFN 429
Query: 298 ---------------------------TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
+L++MY KCGD+ SA +F M R VSW M
Sbjct: 430 MYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLM 489
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
I+GYAQ GD+ + L +M+ G PD VT++S++ CG ALE GK A GL
Sbjct: 490 IAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGL 549
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ + +V +LI MYSKCG + +AR +F + + V+W M+AG +G EA+DLF +
Sbjct: 550 ESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKR 609
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
M++ + PN +TF AV+ AC AG +++G F +M + +++ P HY CM DLLGR G
Sbjct: 610 MLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAG 669
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMAN 570
+L+EA +F+Q MP + D +W LL ACK H N+++ E+ A+ + LEP +A+ YV ++N
Sbjct: 670 RLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSN 729
Query: 571 IYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
IYA GRWD +R +M +KK G+S + I+G+ TF ED
Sbjct: 730 IYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAED 774
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/479 (31%), Positives = 245/479 (51%), Gaps = 38/479 (7%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ L +K+ + N+ T+ I + CAKL F +M+H + + DI++ +++
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+ Y+K + ++F +M RDV +W++MI +A K F M+ I+ + +
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRI 180
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + + +A + L + +H+ G++ DV+V I+ Y+KC ++ +A +F+ +
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+E R VVSW +II K +++ Y M+ G P+ T VSLL+SC PEAL +
Sbjct: 241 KE--RNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNR 298
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +HSH G + DV V N LI+MY KC I AR FD M R +SW+AMI+GYAQ
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 337 KG-----DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW----------- 380
G LDE +L M G P+ VT +S++ C GALE G+
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFE 418
Query: 381 ---------FDNYACSGGLKD-----------NVMVCNALIDMYSKCGSIGDARELFYAL 420
F+ YA G + + NV+ +L+ MY KCG + A ++F +
Sbjct: 419 SDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEM 478
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ VVSW MIAG A +G+ + +L M +P+RVT +++L+AC LE+G
Sbjct: 479 STRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG 537
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 6/221 (2%)
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+ G L EA++L ++ G + + T +I C + E GK GL ++
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ N+LI+ YSK G + ++F + + VV+W++MIA A N +A D F +M + +
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ PNR+TFL++L+AC + LEK + + K + ++ + + + + G++ A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKA-REIHTVVKASGMETDVAVATALITMYSKCGEISLA 233
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ Q M ++ W ++ A HR + A+ L+E
Sbjct: 234 CEIFQKMKERNVVS-WTAIIQANAQHRKLN----EAFELYE 269
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 338/574 (58%), Gaps = 3/574 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL F RM +++ + + + C + D + IHG I+ + F S++FV T ++
Sbjct: 129 ALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMS 188
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+YAKC ++D AYK+F++M +D+ SW ++ G+AQ G ++ L L M+ G + D VT
Sbjct: 189 LYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVT 248
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ + A K L + +S+H + G ++ V+V N + Y KC ++A LVF+G+
Sbjct: 249 LVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+TVVSWN++I GC + +++ + M+ +G P T++ +L +C L +G
Sbjct: 309 S--KTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG 366
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
VH D +VSV+N+LISMYSKC +D A +F+ + ++T V+W AMI GYAQ
Sbjct: 367 WFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQN 425
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G + EAL LF M++ G D T++ +I+ KW A + +NV V
Sbjct: 426 GCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVS 485
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
AL+DMY+KCG+I AR+LF + E+ V++W MI G +G E LDLF++M + ++
Sbjct: 486 TALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVK 545
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN +TFL+V+ AC+H+GF+E+G F M + Y + P ++HYS M DLLGR G+L +A +
Sbjct: 546 PNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWN 605
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F+Q MPIK + G +L ACKIH+N+E+GE A +LF+L+P +V +ANIYA
Sbjct: 606 FIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSM 665
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
WD VA +RT M+ + K PG S V + + TF
Sbjct: 666 WDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTF 699
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 203/419 (48%), Gaps = 5/419 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + A +AL L +M++ +P+++T I A A + + IHG+
Sbjct: 214 WTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAF 273
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S F S + V ++DMY KC A +F M + V SWN MI G AQ G E+
Sbjct: 274 RSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFA 333
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M G VT+MG+ A + L VH + +D++VSV N+ IS Y+
Sbjct: 334 TFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYS 393
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A +F +E +T V+WN++I G ++LN + M G + D T+
Sbjct: 394 KCKRVDIAASIFNNLE---KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTL 450
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V ++++ Q + +H + D +V V L+ MY+KCG I +AR LFD M +
Sbjct: 451 VGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQE 510
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
R ++W AMI GY G E L LF M+ P+ +T LS+IS C SG +E G
Sbjct: 511 RHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLL 570
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
F + L+ + +A++D+ + G + DA +P K +S M+ C ++
Sbjct: 571 FKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIH 629
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 196/395 (49%), Gaps = 13/395 (3%)
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
I+K+ F+++ QT ++ ++ K A ++F+ + + ++ M+ G+A+ L
Sbjct: 70 IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDA 129
Query: 140 LCLFYNM-----RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
LC F M RLV D+ ++ L + K + +H I G ++++ V
Sbjct: 130 LCFFLRMMCDEVRLV--VGDYACLLQLCGENLDLKK---GREIHGLIITNGFESNLFVMT 184
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S YAKC + A +F ++ + +VSW +++ G +L M G
Sbjct: 185 AVMSLYAKCRQIDNAYKMFERMQH--KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQ 242
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD T+VS+L + +AL GR +H + GF+ V+V N L+ MY KCG AR
Sbjct: 243 KPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARL 302
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F GM +T VSW MI G AQ G+ +EA F M GEVP VT++ ++ C G
Sbjct: 303 VFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGD 362
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LE G + L NV V N+LI MYSKC + A +F L EKT V+W MI G
Sbjct: 363 LERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILG 421
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
A NG EAL+LF M ++ + T + V+ A
Sbjct: 422 YAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITA 456
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 160/293 (54%), Gaps = 2/293 (0%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
IS + K A VF +E L+ V ++ ++ G D+L F+ M+ D R
Sbjct: 86 ISLFCKFGSNSEAARVFEHVE--LKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRL 143
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
V LL C L +GR +H I GF+ ++ V+ ++S+Y+KC ID+A +F
Sbjct: 144 VVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMF 203
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ M + VSWT +++GYAQ G AL+L M+ AG+ PD VT++S++ AL
Sbjct: 204 ERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALR 263
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+G+ YA G + V V NAL+DMY KCGS AR +F + KTVVSW TMI GCA
Sbjct: 264 IGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCA 323
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
NGE EA F +M++ P RVT + VL AC + G LE+GW L+ K+
Sbjct: 324 QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKL 376
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 4/299 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS T+ WN+ I E+ +A F +M P +T + ACA L D
Sbjct: 308 RSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW 367
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H + K S++ V +++ MY+KC R+D A +F+ + +V +WNAMI+G+AQ G
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNG 426
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+++ L LF M+ GI+ D T++G+ A K +H + +D +V V
Sbjct: 427 CVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVST 486
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ YAKC +K A +F ++E R V++WN++I G ++L+ + M
Sbjct: 487 ALVDMYAKCGAIKTARKLFDMMQE--RHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAV 544
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLV-HSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+P+ T +S++S+C + +G L+ S Y + + + ++ + + G +D A
Sbjct: 545 KPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDA 603
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 335/569 (58%), Gaps = 7/569 (1%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
++P++ T+P + KAC L + QMIH +VK DI V +++V MYAKC+ +CA
Sbjct: 102 LKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAV 161
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
KLFD+MPD+DVA WN +I + Q G E+ L F MR G + D VT+ +
Sbjct: 162 KLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L + +H ++ G D V + Y KC L+MA VF + +TVV+WNS+
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPN--KTVVAWNSM 279
Query: 230 IGGCTYGDKFD--DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
I G YG K D + ++ M +G +P +TT+ S L +C L++G+ VH + I
Sbjct: 280 ING--YGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRN 337
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
D+ + ++L+ +Y KCG ++SA +F M T VSW MISGY +G L +ALRLF
Sbjct: 338 RIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLF 397
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M + PD +T S+++ C Q ALE G+ N L +N +V AL+DMY+KC
Sbjct: 398 GEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKC 457
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G++ +A +F LPE+ +VSWT+MI +G EAL+LF +M++ +++P+RVTFLA+L
Sbjct: 458 GAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAIL 517
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP-IKS 526
AC+HAG ++ G +FN M VY + P + HYSC+ LLGR G+L EA + +QS P I
Sbjct: 518 SACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISD 577
Query: 527 DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRT 586
D + TL AC++H+N+++G +A L + +P ++ Y+ ++N+YA G+WD V +R+
Sbjct: 578 DFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRS 637
Query: 587 MMKRNQVKKFPGQSLVHINGKTCTFTVED 615
MK +KK PG S + IN K F VED
Sbjct: 638 KMKDLGLKKNPGCSWIEINEKIVPFFVED 666
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 252/484 (52%), Gaps = 10/484 (2%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQ 132
+++H +V +D++V ++ +Y C+ D A +FD + + +++ N ++ G+ +
Sbjct: 23 KVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTR 82
Query: 133 MGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
++ L LF + ++ D T + +A + + L + +H+ + G+ D+
Sbjct: 83 NCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIV 142
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V ++ + YAKCN+ + A +F + + + V WN++I KF+++L ++ M
Sbjct: 143 VGSSLVGMYAKCNEFECAVKLFDEMPD--KDVACWNTVISCYYQSGKFEEALRYFGMMRR 200
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
GF PD T+ + +SSC L +GR +H ++ GF +D V L+ MY KCG ++
Sbjct: 201 FGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEM 260
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F+ M ++T V+W +MI+GY KGD ++LF M + G P L T+ S + C Q
Sbjct: 261 AIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQ 320
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
S L GK+ Y ++ ++ + ++L+D+Y KCG + A +F +P+ T VSW M
Sbjct: 321 SAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVM 380
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I+G G+ +AL LF +M + + P+ +TF +VL AC+ LEKG NL+ +
Sbjct: 381 ISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNL 440
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
N E+ + D+ + G ++EA + +P + D W +++ A H + Y A
Sbjct: 441 GNNEV-VMGALLDMYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITAYGSHGRV----YEA 494
Query: 552 YRLF 555
LF
Sbjct: 495 LELF 498
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 219/437 (50%), Gaps = 5/437 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + +AL F M++ EP+++T +CA+L D + IH +V
Sbjct: 175 WNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELV 234
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F D FV +VDMY KC +L+ A ++F++MP++ V +WN+MI G+ G +
Sbjct: 235 NSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQ 294
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G++ T+ A + L K VH + I + D+ + ++ + Y
Sbjct: 295 LFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYF 354
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ AE +F+ + + T VSWN +I G K D+L + M PD T
Sbjct: 355 KCGKVESAETIFKLMPK--TTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITF 412
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L++C AL +GR +H+ + + V+ L+ MY+KCG ++ A +F + +
Sbjct: 413 TSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE 472
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW- 380
R VSWT+MI+ Y G + EAL LF M + PD VT L+++S C +G ++ G +
Sbjct: 473 RDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYH 532
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT--VVSWTTMIAGCALN 438
F+ G+ + + LI + + G + +A E+ + PE + +T+ + C L+
Sbjct: 533 FNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLH 592
Query: 439 GEFVEALDLFHQMMELD 455
+++ +++ D
Sbjct: 593 KNLDLGVEIAENLIDKD 609
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 196/383 (51%), Gaps = 4/383 (1%)
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D ++ L +A++++K L K +H + +G+ DV VC IS Y CN A+ VF
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY-RHMIYDGFRPDVTTVVSLLSSCVCPE 272
IE + N ++ G T +D++L + + M Y +PD T S+L +C
Sbjct: 62 DVIENPFEISLC-NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+V G+++H+ + G +D+ V ++L+ MY+KC + + A LFD M D+ W +IS
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y Q G +EALR F M G PD VT+ + IS C + L+ G+ + G +
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRM 240
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+ V AL+DMY KCG + A E+F +P KTVV+W +MI G G+ + + LF +M
Sbjct: 241 DSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMY 300
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
++P T + L AC+ + L +G + + ++ P++ S + DL + GK+
Sbjct: 301 SEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIR-NRIQPDIFLNSSLMDLYFKCGKV 359
Query: 513 KEALDFVQSMPIKSDAGIWGTLL 535
+ A + MP K+ W ++
Sbjct: 360 ESAETIFKLMP-KTTTVSWNVMI 381
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 163/364 (44%), Gaps = 36/364 (9%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ WNS I K + + LF+RM ++P T AC++ + L +
Sbjct: 270 NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKF 329
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+HG+I+++ DIF+ ++++D+Y KC +++ A +F MP SWN MI G+ G
Sbjct: 330 VHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGK 389
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
L L LF M ++ D +T + A L + +H+ + + + V
Sbjct: 390 LFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGA 449
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC ++ A VF+ + E R +VSW S+I + ++L + M+ +
Sbjct: 450 LLDMYAKCGAVEEAFGVFKCLPE--RDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVK 507
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD T +++LS+C LV L H N +I++Y
Sbjct: 508 PDRVTFLAILSAC-SHAGLVDDGLYH--------------FNQMINVY------------ 540
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS-MISGCGQSGA 374
G+ R ++ +I+ + G L EA + +++ E+ D +LS + S C
Sbjct: 541 --GIIPRIE-HYSCLITLLGRAGRLHEAYEI---LQSNPEISDDFQLLSTLFSACRLHKN 594
Query: 375 LELG 378
L+LG
Sbjct: 595 LDLG 598
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K+ +T WN I V + + AL LF M K+ +EP+ +TF + AC++L+
Sbjct: 367 KLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALE 426
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH IV+ ++ V ++DMYAKC ++ A+ +F +P+RD+ SW +MI +
Sbjct: 427 KGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYG 486
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G + + L LF M ++ D VT + + A HA
Sbjct: 487 SHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHA 523
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/608 (36%), Positives = 338/608 (55%), Gaps = 7/608 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+K++R I+ +NS I + + +AL LF +M+ + ++P+ +T + ACA +
Sbjct: 271 FSKMHRRDRIS-YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGA 329
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ +H +++K SD+ ++ +++D+Y KC ++ A++ F +V WN M+V
Sbjct: 330 GYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVA 389
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ Q+G L + +F M++ G+ + T + + L L + +H+ I G +
Sbjct: 390 YGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN 449
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT--VVSWNSIIGGCTYGDKFDDSLNFYR 247
V VC+ I YAK +L A RGI + LR VVSW ++I G T D F ++L ++
Sbjct: 450 VYVCSVLIDMYAKHGELDTA----RGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQ 505
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G R D S +S+C +AL QG+ +H+ G+ D+S+ N L+S+Y++CG
Sbjct: 506 EMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCG 565
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
A F+ + + +SW A+ISG+AQ G +EAL++F M AG +L T S +S
Sbjct: 566 RAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVS 625
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
+ ++ GK G N LI +YSKCGSI DA+ F+ +PEK VVS
Sbjct: 626 ATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVS 685
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W MI G + +G EA+ LF +M +L L PN VTF+ VL AC+H G + +G YF M+
Sbjct: 686 WNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMS 745
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
K + + P+ HY C+ DLLGR L A +F++ MPI+ DA IW TLL AC +H+NIEIG
Sbjct: 746 KEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIG 805
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E+ A L ELEP +A YV ++N+YA+ G+WD R MMK VKK PG+S + +
Sbjct: 806 EFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNS 865
Query: 608 TCTFTVED 615
F V D
Sbjct: 866 IHAFFVGD 873
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 251/520 (48%), Gaps = 4/520 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I +A+LLF +M K+ + P F + AC K+ F + +HG IV
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S+ FV +V +Y++ L A ++F KM RD S+N++I G AQ GF ++ L
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+L ++ D VTV L A K +HS+ I +G+ +D+ + + + Y
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++ A F E VV WN ++ +S + M +G P+ T
Sbjct: 361 KCFDIETAHEYFLTTET--ENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C AL G +H+ I GF +V V + LI MY+K G++D+AR + + +
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
VSWTAMI+GY Q EAL+LF ME G D + S IS C AL G+
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI 538
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G +++ + NAL+ +Y++CG DA F + K +SW +I+G A +G
Sbjct: 539 HAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHC 598
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL +F QM + + N TF + + A + +++G +M K + E +
Sbjct: 599 EEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNV 657
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ L + G +++A MP K+ W ++ H
Sbjct: 658 LITLYSKCGSIEDAKREFFEMPEKNVVS-WNAMITGYSQH 696
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 242/500 (48%), Gaps = 9/500 (1%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M++ I N T+ ++ + C L ++ +H I KS F + + + ++D+Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
+D A KLFD +P +V+ WN +I G +VL LF M + D T + +A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 165 AIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
K + + +H+ IH G + VCN I Y+K + +A+LVF + L+
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL--FLKDS 178
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSW ++I G + + D+++ + M P S+LS+C E G +H
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ +G + V N L+++YS+ G++ +A +F M R R+S+ ++ISG AQ+G D A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
L+LF M+ PD VTV S++S C GA GK +Y G+ ++++ +L+D+
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y KC I A E F + VV W M+ G E+ +F QM L PN+ T+
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQS 521
++L+ CT G L+ G + T+V + + N Y C + D+ + G+L A +Q
Sbjct: 419 PSILRTCTSLGALDLGE---QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQR 475
Query: 522 MPIKSDAGIWGTLLCACKIH 541
+ + D W ++ H
Sbjct: 476 LR-EEDVVSWTAMIAGYTQH 494
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/604 (38%), Positives = 336/604 (55%), Gaps = 6/604 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS WN I + + + K L FR+ + EPN T AC L
Sbjct: 111 RSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGL 170
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG+I++S F VQ +++ MYA D ++ A +LFD+M +RDV SW+ MI G+ Q G
Sbjct: 171 KMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQTG 229
Query: 135 FLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L LF M I+ D +T++ + +A + +S+ +SVH I G+D D+ V
Sbjct: 230 EAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVG 289
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N+ I Y+KC+D + A F E R VSWNSII G +K ++L+ + M G
Sbjct: 290 NSIIDMYSKCDDHESAFKAFN--EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 347
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
FR D T+V+LL SC Q + +HS I +G++L+ VIN+LI YSKC I+ A
Sbjct: 348 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 407
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD + + VSW+AMI+G+ G DEA+ LF M A E P+ VT+LS++ S
Sbjct: 408 KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSA 467
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L+ KW A GL V V A++DMY+KCG IG +R+ F +PEK +VSW MIA
Sbjct: 468 DLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIA 527
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
C +NG +AL L +M L+PN VT L+VL AC+H G +E+G +F M + + V
Sbjct: 528 ACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVE 587
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHRNIEIGEYVA 551
P L HYSCM D+L R GKL A++ ++ MP ++ AG+WG LL AC+ N +G A
Sbjct: 588 PGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAA 647
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+R+ ELEP S+A Y +++YA G W A +R ++K V+ G SLVH+ K F
Sbjct: 648 FRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRF 707
Query: 612 TVED 615
D
Sbjct: 708 VAGD 711
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 277/560 (49%), Gaps = 29/560 (5%)
Query: 19 INQWNSQIREAVDKN--EAHKALLLFRRMKKNDIEPNNLTFPF-IAKACAKLSDFLYSQM 75
+ WN I+++ ++ ++ +A + +MKK + + T I KAC+ L + +
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP-VRHGKS 70
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++K F S +++D Y K LD A +FD M RD SWN MI G G
Sbjct: 71 IHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 130
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKS---VHSFGIHIGVDADVS 191
+K L F R++ + + T++ AIHA + L ++ +H + I G S
Sbjct: 131 SDKGLWWFRQARVIAFEPNVSTLV----LAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS 186
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N+ +S YA ND++ AE +F + E R V+SW+ +IGG + +L + M
Sbjct: 187 VQNSLLSMYAD-NDMERAEELFDEMCE--RDVISWSVMIGGYVQTGEAKMALQLFLEMTS 243
Query: 252 DG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ D T+VS+L +C + GR VH I G D D+ V N++I MYSKC D +
Sbjct: 244 NASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHE 303
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA F+ M R VSW ++ISG + EAL LF++M AG D VT+++++ C
Sbjct: 304 SAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCK 363
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
K+ + G + N V N+LID YSKC I A +LF L K VSW+
Sbjct: 364 YFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSA 423
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKV 489
MIAG G+ EA+ LF +M + +PN VT L++L+A + + L++ W + + +
Sbjct: 424 MIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRR- 482
Query: 490 YQVNPELNHYSCMADLLGRKGKL---KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
+ E+ + + D+ + G++ ++A D + I S WG ++ AC ++ +
Sbjct: 483 -GLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS----WGAMIAACGMN---GL 534
Query: 547 GEYVAYRLFELEPHSAAPYV 566
L E++ H P V
Sbjct: 535 ARDALALLSEMKLHGLKPNV 554
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 333/594 (56%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I +A LF+RM++ ++P+ + F + +AC + +H +
Sbjct: 280 WTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK 339
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + ++I+V T ++ MY KC ++ A ++FD + R+V SW AMI GFAQ G +++
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M GI+ + VT M + A L + + I G +D V +S YA
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC LK A VF I + + VV+WN++I +++D++L ++ ++ +G +P+ +T
Sbjct: 460 KCGSLKDAHRVFEKISK--QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTF 517
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L+ C ++L G+ VH + G + D+ V N L+SM+ CGD+ SA+ LF+ M
Sbjct: 518 TSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPK 577
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW +I+G+ Q G A F M+ +G PD +T +++ C AL G+
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRL 637
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+V+V LI MY+KCGSI DA ++F+ LP+K V SWT+MIAG A +G
Sbjct: 638 HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRG 697
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL+LF+QM + ++P+ +TF+ L AC HAG +E+G +F M K + + P + HY C
Sbjct: 698 KEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGC 756
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL GR G L EA++F+ M ++ D+ +WG LL AC++H N+E+ E A + EL+P+
Sbjct: 757 MVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPND 816
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+V ++NIYA G W VA +R +M V K PGQS + ++GK TF +D
Sbjct: 817 NGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDD 870
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 288/580 (49%), Gaps = 37/580 (6%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WN + V +A L +M ++ ++P+ TF + ACA + +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++ I+K+ + +D+FV T +++M+ KC + A K+FD +P RD+ +W +MI G A+ G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ LF M G+Q D V + L +A H + L K VH+ +G D ++ V
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S Y KC ++ A VF ++ R VVSW ++I G + D++ F+ MI G
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKG--RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P+ T +S+L +C P AL +G+ + H I G+ D V L+SMY+KCG + A
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+ + + V+W AMI+ Y Q D AL F A+ G P+ T S+++ C S +
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LELGKW GL+ ++ V NAL+ M+ CG + A+ LF +P++ +VSW T+IAG
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEK----- 478
+G+ A D F M E ++P+++TF +L AC HA E
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCD 649
Query: 479 ---GWGYFNLMTK---------VYQVNPELNHYSCMADLLG--RKGKLKEALDFVQSMPI 524
G G ++ TK V+ P+ N YS + + G + G+ KEAL+ M
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQ 709
Query: 525 KSDAGIWGTL---LCACKIHRNIEIG--EYVAYRLFELEP 559
+ W T L AC IE G + + + F +EP
Sbjct: 710 EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEP 749
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 265/507 (52%), Gaps = 6/507 (1%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
++A+ + R+ + I+ T+ + + C K + + I+ HI KS DIF++ T+
Sbjct: 92 NEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTL 151
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
++MYAKC A ++FD M ++DV SWN ++ G+ Q G E+ L M ++ D
Sbjct: 152 INMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
T + + A A+++ + +++ + G D D+ V I+ + KC D+ A VF
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ R +V+W S+I G +F + N ++ M +G +PD VSLL +C PEAL
Sbjct: 272 LP--TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
QG+ VH+ G+D ++ V ++SMY+KCG ++ A +FD + R VSWTAMI+G+A
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q G +DEA F M +G P+ VT +S++ C AL+ G+ ++ G +
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V AL+ MY+KCGS+ DA +F + ++ VV+W MI + ++ AL F +++
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++PN TF ++L C + LE G W +F +M + +L+ + + + G L
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMS 567
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIH 541
A + MP K D W T++ H
Sbjct: 568 AKNLFNDMP-KRDLVSWNTIIAGFVQH 593
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 227/452 (50%), Gaps = 7/452 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ + + W + I +A L F +M ++ IEPN +TF I AC+ S
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
Q I HI+++ + SD V+T ++ MYAKC L A+++F+K+ ++V +WNAMI + Q
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ L F + GI+ + T + + L L K VH + G+++D+ V
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHV 551
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N +S + C DL A+ +F + + R +VSWN+II G K + ++++ M
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMPK--RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G +PD T LL++C PEAL +GR +H+ FD DV V LISMY+KCG I+ A
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDA 669
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F + + SWT+MI+GYAQ G EAL LF+ M+ G PD +T + +S C +
Sbjct: 670 HQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHA 729
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWT 429
G +E G ++ + ++D++ + G + +A E + P+ V W
Sbjct: 730 GLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRV--WG 787
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
++ C ++ A + +ELD N V
Sbjct: 788 ALLGACQVHLNVELAEKAAQKKLELDPNDNGV 819
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/600 (34%), Positives = 337/600 (56%), Gaps = 2/600 (0%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ ++ W I D + A +F++M++ + PN +T+ + A + + + +
Sbjct: 307 TKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKT 366
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H HI+ + SD+ V T +V MYAKC ++F+K+ +RD+ +WN MI G A+ G
Sbjct: 367 VHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGN 426
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ +++ M+ G+ + +T + L A ++ L + +HS + G D+SV N
Sbjct: 427 WEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNA 486
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
IS YA+C +K A L+F + + ++SW ++IGG ++L ++ M G +
Sbjct: 487 LISMYARCGSIKDARLLFNKMVR--KDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T S+L++C P AL GR +H I G D V NTL++MYS CG + AR +
Sbjct: 545 PNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQV 604
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M R V++ AMI GYA EAL+LF ++ G PD VT ++M++ C SG+L
Sbjct: 605 FDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 664
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E K + G + + NAL+ Y+KCGS DA +F + ++ V+SW +I GC
Sbjct: 665 EWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGC 724
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G + L LF +M ++P+ VTF+++L AC+HAG LE+G YF M++ + + P
Sbjct: 725 AQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPT 784
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HY CM DLLGR G+L E +++MP +++ IWG LL AC+IH N+ + E A
Sbjct: 785 IEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSL 844
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+L+P +AA YV ++++YA G WD A LR +M++ V K PG+S + + K F ED
Sbjct: 845 KLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAED 904
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 278/534 (52%), Gaps = 8/534 (1%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+LN R T++ WN+ + V +AL L R M+++ + T + +C S
Sbjct: 201 KLNHTER--TVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPS 258
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IH +K+ D+ V +++MYAKC + A ++FDKM + V SW +I
Sbjct: 259 ALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIG 318
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+A G E +F M+ G+ + +T + + A L K+VHS ++ G ++
Sbjct: 319 GYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHES 378
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
D++V + YAKC K VF + R +++WN++IGG G ++++ Y
Sbjct: 379 DLAVGTALVKMYAKCGSYKDCRQVFEKLVN--RDLIAWNTMIGGLAEGGNWEEASEIYHQ 436
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +G P+ T V LL++CV P AL GR +HS + GF D+SV N LISMY++CG
Sbjct: 437 MQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGS 496
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
I AR LF+ M + +SWTAMI G A+ G EAL +F M+ AG P+ VT S+++
Sbjct: 497 IKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNA 556
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C AL+ G+ GL + V N L++MYS CGS+ DAR++F + ++ +V++
Sbjct: 557 CSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAY 616
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI G A + EAL LF ++ E L+P++VT++ +L AC ++G LE +L+ K
Sbjct: 617 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLK 676
Query: 489 -VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
Y + L + + + G +AL M +K + W ++ C H
Sbjct: 677 DGYLSDTSLG--NALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQH 727
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 252/474 (53%), Gaps = 14/474 (2%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ + + +++ N+ + + K C ++ D + + +H HI++ D + ++
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183
Query: 97 DMYAKCDRLDCAYKLFDKM--PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
+MY +C ++ A ++++K+ +R V SWNAM+VG+ Q G++E+ L L M+ G+
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T M L + L + +H + + DV+V N ++ YAKC + A VF
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFD 303
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+E ++VVSW IIGG + + ++ M +G P+ T +++L++ P AL
Sbjct: 304 KME--TKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G+ VHSH ++ G + D++V L+ MY+KCG R +F+ + +R ++W MI G
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
A+ G+ +EA ++ M+ G +P+ +T + +++ C AL G+ + G ++
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V NALI MY++CGSI DAR LF + K ++SWT MI G A +G EAL +F M +
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGY--------FNLMTKVYQVNPELNHYS 500
L+PNRVT+ ++L AC+ L+ WG L T + N +N YS
Sbjct: 542 GLKPNRVTYTSILNACSSPAALD--WGRRIHQQVIEAGLATDAHVANTLVNMYS 593
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 137/244 (56%), Gaps = 4/244 (1%)
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D +++ +++ G R + + +L C+ + LV GR VH H I + LD +N L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 300 ISMYSKCGDIDSARFLFDGM--CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
I+MY +CG I+ AR +++ + +RT SW AM+ GY Q G ++EAL+L M+ G
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
T + ++S C ALE G+ A L +V V N +++MY+KCGSI +ARE+F
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ K+VVSWT +I G A G A ++F +M + + PNR+T++ VL A + L+
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362
Query: 478 KGWG 481
WG
Sbjct: 363 --WG 364
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 327/600 (54%), Gaps = 12/600 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I + AL + +M ++ + P+ TF I KAC+ L D + +H H++
Sbjct: 132 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F + I Q ++ MY K + + A +F +M RD+ SW +MI GF+Q+G+ + LC
Sbjct: 192 KSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 251
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-----KSVHSFGIHIGVDADVSVCNTW 196
F M G+ + G +A SLL + +H I G+ DV +
Sbjct: 252 YFKEMLHQGVYLPNEFIFGSVFSACS----SLLQPEYGRQLHGMSIKFGLGRDVFAGCSL 307
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
YAKC L A +VF I G +V+WN+II G YG +++ F+ M + G P
Sbjct: 308 CDMYAKCGLLSCARVVFYQI--GRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIP 365
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TV SLL +C P L QG VH + G DLDV V NTL++MY+KC ++ A F F
Sbjct: 366 DEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFF 425
Query: 317 DGM-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ M C+ VSW A+++ + +E RL M + PD +T+ +++ ++ ++
Sbjct: 426 EEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSI 485
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E+G YA GL + V N LID+Y+KCGS+ A ++F ++ VVSW+++I G
Sbjct: 486 EIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGY 545
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A G EAL LF M LD++PN VTF+ VL AC+H G +E+GW + M K + + P
Sbjct: 546 AQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPT 605
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
H SCM DLL R G L EA F+ M D +W TLL ACK H N+++G+ A +
Sbjct: 606 REHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENIL 665
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+++P ++A +V + NIYA G W+ VA LR++MK+ V+K PGQS + + + F VED
Sbjct: 666 KIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVED 725
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/528 (28%), Positives = 246/528 (46%), Gaps = 8/528 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L+K+ + N++ + + + NEA KA + KK T+ ++ AC+ L
Sbjct: 21 LSKLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQ--KKTGFCLTLSTYAYLISACSYLRS 78
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + IH H++KS D+ +Q +++MY KC L A K+FD MP+R+V SW ++I G
Sbjct: 79 LEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAG 138
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
++Q G L ++ M G+ D T + +A + L + +H+ + A
Sbjct: 139 YSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAH 198
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ N IS Y K N + A VF + R ++SW S+I G + ++L +++ M
Sbjct: 199 IIAQNALISMYTKSNLIIDALDVFSRM--ATRDLISWGSMIAGFSQLGYELEALCYFKEM 256
Query: 250 IYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
++ G + P+ S+ S+C GR +H I +G DV +L MY+KCG
Sbjct: 257 LHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGL 316
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ AR +F + V+W A+I+G+A GD EA+ F M G +PD +TV S++
Sbjct: 317 LSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCA 376
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVS 427
C L G Y GL +V VCN L+ MY+KC + DA F + +VS
Sbjct: 377 CTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVS 436
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W ++ C + + E L M RP+ +T VL A +E G
Sbjct: 437 WNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYAL 496
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K +N + + + + DL + G LK A SM I D W +L+
Sbjct: 497 KT-GLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM-INPDVVSWSSLI 542
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/597 (35%), Positives = 331/597 (55%), Gaps = 8/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + + + A+ LFR M+ + EPN T CA +D L +H V
Sbjct: 210 WNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAV 269
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++ V T++ MYAKC LD A++LF+ MP D+ +WN MI G Q G +
Sbjct: 270 KCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFG 329
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LFY+M+ G + D +T++ L A L K VH + + V+ DV + + + Y
Sbjct: 330 LFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYF 389
Query: 202 KCNDLKMAELVF---RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
KC D++MA+ ++ R I+ VV +++I G +++L +R+++ +P+
Sbjct: 390 KCRDVRMAQNLYDAARAID-----VVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNA 444
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ S+L C AL G+ +H + + ++ V + L+ MY+KCG +D + ++F
Sbjct: 445 VTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLK 504
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + V+W +MIS ++Q G EAL LF M G + +T+ + +S C A+ G
Sbjct: 505 MSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYG 564
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K G +K ++ +ALIDMY+KCG++ A +F +P+K VSW ++I+ +
Sbjct: 565 KEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAH 624
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G E++ L H M E +P+ VTFLA++ AC HAG +E+G F MTK Y + P + H
Sbjct: 625 GLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEH 684
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
++CM DL R GKL +A+ F+ MP K DAGIWG LL AC++HRN+E+ + + LF+L+
Sbjct: 685 FACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLD 744
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P ++ YV M+NI A+ GRWDGV+ +R +MK N++ K PG S V +N + F D
Sbjct: 745 PANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASD 801
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 269/543 (49%), Gaps = 22/543 (4%)
Query: 2 AASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDI--EPNNLTFPF 59
AASSLP WN IR + H A+L + +M + P+ T P+
Sbjct: 101 AASSLP--------------WNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPY 146
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ K+CA L +++H +D++V + +V MYA L A FD +P+RD
Sbjct: 147 VVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERD 206
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVH 178
WN M+ G + G ++ + LF NMR G + +F T+ L+ A A LS + +H
Sbjct: 207 CVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQ-LH 265
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
S + G++ +V+V NT ++ YAKC L A +F + + +V+WN +I GC
Sbjct: 266 SLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQD--DLVTWNGMISGCVQNGL 323
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
F ++ + M G RPD T+VSLL + L QG+ VH + + ++DV +++
Sbjct: 324 FVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSA 383
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+ +Y KC D+ A+ L+D V + MISGY G +EAL++F + P+
Sbjct: 384 LVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPN 443
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT+ S++ GC AL LG+ Y + V +AL+DMY+KCG + + +F
Sbjct: 444 AVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFL 503
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ +K V+W +MI+ + NG+ EALDLF QM ++ N +T A L AC +
Sbjct: 504 KMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYY 563
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G + K + ++ S + D+ + G L+ AL + MP K++ W +++ A
Sbjct: 564 GKEIHGVTIK-GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVS-WNSIISAY 621
Query: 539 KIH 541
H
Sbjct: 622 GAH 624
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 197/428 (46%), Gaps = 10/428 (2%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSD---IFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
+ + C IH V S SD + + T ++ MY R A +F +P
Sbjct: 38 VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 117 DRDVAS---WNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHL 171
AS WN +I GF G + + M D T+ + ++ +
Sbjct: 98 RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
SL + VH IG+ DV V + + YA L A F GI E R V WN ++
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPE--RDCVLWNVMMD 215
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
GC D ++ +R+M G P+ T+ LS C L+ G +HS + G +
Sbjct: 216 GCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEP 275
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V+V NTL++MY+KC +D A LF+ M V+W MISG Q G EA LF+ M+
Sbjct: 276 EVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQ 335
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+G PD +T++S++ L+ GK Y + +V + +AL+D+Y KC +
Sbjct: 336 RSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVR 395
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A+ L+ A VV +TMI+G LNG EAL +F ++E ++PN VT +VL C
Sbjct: 396 MAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCA 455
Query: 472 HAGFLEKG 479
L G
Sbjct: 456 SMAALPLG 463
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 216/450 (48%), Gaps = 6/450 (1%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL ++ + WN I V +A LF M+++ P+++T + A L+
Sbjct: 298 RLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLN 357
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ +HG+IV++ D+F+ + +VD+Y KC + A L+D DV + MI
Sbjct: 358 GLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMIS 417
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+ G E+ L +F + I+ + VT+ + L L + +H + + +
Sbjct: 418 GYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYER 477
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
V + + YAKC L ++ +F + + + V+WNS+I + K ++L+ +R
Sbjct: 478 KCYVESALMDMYAKCGRLDLSHYIFLKMSQ--KDEVTWNSMISSFSQNGKPQEALDLFRQ 535
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +G + + T+ + LS+C A+ G+ +H I D+ + LI MY+KCG+
Sbjct: 536 MCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGN 595
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
++ A +F+ M D+ VSW ++IS Y G + E++ L M+ G PD VT L++IS
Sbjct: 596 LELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISA 655
Query: 369 CGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C +G +E G + F + + ++D+YS+ G + A + +P K
Sbjct: 656 CAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAG 715
Query: 428 -WTTMIAGCALNGEFVEALDLFHQ-MMELD 455
W ++ C ++ VE D+ Q + +LD
Sbjct: 716 IWGALLHACRVHRN-VELADIASQELFKLD 744
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 10/286 (3%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD---VSVINTLISMYSKCGDIDSARFLFD 317
++++L CV L G +H+ + G D +++ L+ MY A +F
Sbjct: 35 LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94
Query: 318 GM---CDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQS 372
+ + + W +I G+ G A+ + M A PD T+ ++ C
Sbjct: 95 ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GA+ LG+ A + GL ++V V +AL+ MY+ G +G+AR+ F +PE+ V W M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
GC G+ A+ LF M PN T L C L G +L K +
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKC-GL 273
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
PE+ + + + + L +A + MP + D W ++ C
Sbjct: 274 EPEVAVANTLLAMYAKCQCLDDAWRLFELMP-QDDLVTWNGMISGC 318
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/604 (38%), Positives = 336/604 (55%), Gaps = 6/604 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS WN I + + + K L FR+ + EPN T AC L
Sbjct: 97 RSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGL 156
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG+I++S F VQ +++ MYA D ++ A +LFD+M +RDV SW+ MI G+ Q G
Sbjct: 157 KMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQTG 215
Query: 135 FLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L LF M I+ D +T++ + +A + +S+ +SVH I G+D D+ V
Sbjct: 216 EAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVG 275
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N+ I Y+KC+D + A F E R VSWNSII G +K ++L+ + M G
Sbjct: 276 NSIIDMYSKCDDHESAFKAFN--EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 333
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
FR D T+V+LL SC Q + +HS I +G++L+ VIN+LI YSKC I+ A
Sbjct: 334 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 393
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD + + VSW+AMI+G+ G DEA+ LF M A E P+ VT+LS++ S
Sbjct: 394 KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSA 453
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L+ KW A GL V V A++DMY+KCG IG +R+ F +PEK +VSW MIA
Sbjct: 454 DLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIA 513
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
C +NG +AL L +M L+PN VT L+VL AC+H G +E+G +F M + + V
Sbjct: 514 ACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVE 573
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHRNIEIGEYVA 551
P L HYSCM D+L R GKL A++ ++ MP ++ AG+WG LL AC+ N +G A
Sbjct: 574 PGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAA 633
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+R+ ELEP S+A Y +++YA G W A +R ++K V+ G SLVH+ K F
Sbjct: 634 FRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRF 693
Query: 612 TVED 615
D
Sbjct: 694 VAGD 697
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 163/534 (30%), Positives = 261/534 (48%), Gaps = 38/534 (7%)
Query: 19 INQWNSQIREAVDKN--EAHKALLLFRRMKKNDIEPNNLTFPF-IAKACAKLSDFLYSQM 75
+ WN I+++ ++ ++ +A + +MKK + + T I KAC+ L F
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLPGF----- 66
Query: 76 IHGHIVKSPFWSDIFVQT--TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
D T +++D Y K LD A +FD M RD SWN MI G
Sbjct: 67 ------------DSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSR 114
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKS---VHSFGIHIGVDAD 189
G +K L F R++ + + T++ AIHA + L ++ +H + I G
Sbjct: 115 GASDKGLWWFRQARVIAFEPNVSTLV----LAIHACRSLGAMEEGLKMHGYIIRSGFLDI 170
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
SV N+ +S YA ND++ AE +F + E R V+SW+ +IGG + +L + M
Sbjct: 171 PSVQNSLLSMYAD-NDMERAEELFDEMCE--RDVISWSVMIGGYVQTGEAKMALQLFLEM 227
Query: 250 IYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+ D T+VS+L +C + GR VH I G D D+ V N++I MYSKC D
Sbjct: 228 TSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDD 287
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+SA F+ M R VSW ++ISG + EAL LF++M AG D VT+++++
Sbjct: 288 HESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQS 347
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C K+ + G + N V N+LID YSKC I A +LF L K VSW
Sbjct: 348 CKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSW 407
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMT 487
+ MIAG G+ EA+ LF +M + +PN VT L++L+A + + L++ W + +
Sbjct: 408 SAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR 467
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + E+ + + D+ + G++ + +P K+ WG ++ AC ++
Sbjct: 468 R--GLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS-WGAMIAACGMN 518
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 334/611 (54%), Gaps = 3/611 (0%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L RL + ++ WN IR A+ L+ M + PN T+PF+ KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
L IH H SD+FV T +VD YAKC L A +LF M RDV +WNA
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MI G + G + + L M+ GI + T++G+ AK L K++H + +
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D V V + YAKC L A +F + G+R VSW+++IGG D ++L
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVM--GVRNEVSWSAMIGGYVXSDCMKEALEL 298
Query: 246 YRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+ MI D P T+ S+L +C L +GR +H + I G LD+ + NTL+SMY+
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYA 358
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCG ID A FD M + VS++A++SG Q G+ AL +F M+ +G PDL T+L
Sbjct: 359 KCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++ C AL+ G Y G + ++CNALIDMYSKCG I ARE+F +
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+VSW MI G ++G +EAL LFH ++ L L+P+ +TF+ +L +C+H+G + +G +F+
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
M++ + + P + H CM D+LGR G + EA F+++MP + D IW LL AC+IH+NI
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 598
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
E+GE V+ ++ L P S +V ++NIY+ GRWD A++R K +KK PG S + I
Sbjct: 599 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 658
Query: 605 NGKTCTFTVED 615
NG F D
Sbjct: 659 NGIVHAFVGGD 669
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 242/486 (49%), Gaps = 11/486 (2%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ +AC + ++ IH H +K+ +D V + +Y C+++ A +LFD++P+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V WN +I +A G + + L+++M +G++ + T + +A + +HS
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
G+++DV VC + YAKC L A+ +F + R VV+WN++I GC+
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH--RDVVAWNAMIAGCSLYGLC 191
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
DD++ M +G P+ +T+V +L + +AL G+ +H + + FD V V L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PD 358
+ MY+KC + AR +FD M R VSW+AMI GY + EAL LF M + P
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPT 311
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT+ S++ C + L G+ Y G ++++ N L+ MY+KCG I DA F
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFD 371
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ K VS++ +++GC NG AL +F M + P+ T L VL AC+H L+
Sbjct: 372 XMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQH 431
Query: 479 GW---GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
G+ GY L+ + + + + + + D+ + GK+ A + M + D W ++
Sbjct: 432 GFCSHGY--LIVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMI 486
Query: 536 CACKIH 541
IH
Sbjct: 487 IGYGIH 492
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 198/398 (49%), Gaps = 6/398 (1%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L +A I +K L+ K +H + +AD SV + Y CN + +A +F I
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-- 71
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+V+ WN II + FD +++ Y M++ G RP+ T +L +C A+ G +
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
HSH +G + DV V L+ Y+KCG + A+ LF M R V+W AMI+G + G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
D+A++L M+ G P+ T++ ++ G++ AL GK Y + V+V L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPN 459
+DMY+KC + AR++F + + VSW+ MI G + EAL+LF QM+ D + P
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPT 311
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VT +VL+AC L +G + K+ V L + ++ + + G + +A+ F
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLS-MYAKCGVIDDAIRFF 370
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
M K D+ + ++ C + N + + +R+ +L
Sbjct: 371 DXMNPK-DSVSFSAIVSGCVQNGNAAVALSI-FRMMQL 406
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
L ++ C QS +L K + + V + L +Y C + AR LF +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+V+ W +I A NG F A+DL+H M+ L +RPN+ T+ VL+AC+ +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ K++ + ++ + + D + G L EA SM + D W ++ C ++
Sbjct: 132 HS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/606 (34%), Positives = 337/606 (55%), Gaps = 3/606 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+K+ + S ++ W I D + A +F++M++ + PN +T+ + A + +
Sbjct: 184 FDKMEKKSVVS-WTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAA 242
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H I+ + SD V T +V MYAKC ++F+K+ +RD+ +WN MI G
Sbjct: 243 LKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 302
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
A+ G+ E+ ++ M+ G+ + +T + L A +++ L K +HS G +D
Sbjct: 303 LAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSD 362
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V N IS Y++C +K A LVF + + V+SW ++IGG ++L Y+ M
Sbjct: 363 IGVQNALISMYSRCGSIKDARLVFDKMVR--KDVISWTAMIGGLAKSGFGAEALTVYQEM 420
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
G P+ T S+L++C P AL GR +H + G D V NTL++MYS CG +
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSV 480
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
AR +FD M R V++ AMI GYA EAL+LF ++ G PD VT ++M++ C
Sbjct: 481 KDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 540
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
SG+LE + GG + V NAL+ Y+KCGS DA +F + ++ V+SW
Sbjct: 541 ANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWN 600
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I G A +G +AL LF +M ++P+ VTF+++L AC+HAG LE+G YF M++
Sbjct: 601 AIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQD 660
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P + HY CM DLLGR G+L EA +++MP +++ IWG LL AC+IH N+ + E
Sbjct: 661 FAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAER 720
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A +L+ +A YV ++++YA G WD A LR +M++ V K PG+S + + K
Sbjct: 721 AAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLH 780
Query: 610 TFTVED 615
F ED
Sbjct: 781 YFVAED 786
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 249/464 (53%), Gaps = 2/464 (0%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
Y T++ WN+ + + KAL L R+M+++ + P+ T +C +
Sbjct: 86 YMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWG 145
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH +++ D+ V +++MYAKC ++ A ++FDKM + V SW I G+A
Sbjct: 146 REIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADC 205
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G E +F M G+ + +T + + A L K+VHS ++ G ++D +V
Sbjct: 206 GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG 265
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ YAKC K VF + R +++WN++IGG G ++++ Y M +G
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKLVN--RDLIAWNTMIGGLAEGGYWEEASEVYNQMQREG 323
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P+ T V LL++CV AL G+ +HS GF D+ V N LISMYS+CG I AR
Sbjct: 324 VMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDAR 383
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD M + +SWTAMI G A+ G EAL ++ M+ AG P+ VT S+++ C
Sbjct: 384 LVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPA 443
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALE G+ GL + V N L++MYS CGS+ DAR++F + ++ +V++ MI
Sbjct: 444 ALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIG 503
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
G A + EAL LF ++ E L+P++VT++ +L AC ++G LE
Sbjct: 504 GYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLE 547
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 290/572 (50%), Gaps = 31/572 (5%)
Query: 34 EAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQT 93
E A+ + + +++ + N+ + + K C ++ D + + +H HI++ D +
Sbjct: 3 EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62
Query: 94 TMVDMYAKCDRLDCAYKLFDKMP--DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI 151
+++MY +C ++ A +++ K+ +R V SWNAM+VG+ Q G++EK L L M+ G+
Sbjct: 63 ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGL 122
Query: 152 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
D T+M + L + +H + G+ DV V N ++ YAKC ++ A
Sbjct: 123 APDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEARE 182
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
VF +E+ ++VVSW IGG + + + ++ M +G P+ T +S+L++ P
Sbjct: 183 VFDKMEK--KSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
AL G+ VHS ++ G + D +V L+ MY+KCG R +F+ + +R ++W MI
Sbjct: 241 AALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 300
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
G A+ G +EA ++ M+ G +P+ +T + +++ C S AL GK + G
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
++ V NALI MYS+CGSI DAR +F + K V+SWT MI G A +G EAL ++ +M
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGY--------FNLMTKVYQVNPELNHYSCMA 503
+ + PNRVT+ ++L AC+ LE WG L T + N +N YS
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALE--WGRRIHQQVVEAGLATDAHVGNTLVNMYSMC- 477
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE-LEPHSA 562
G +K+A M I+ D + ++ H +G+ A +LF+ L+
Sbjct: 478 ------GSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLGKE-ALKLFDRLQEEGL 526
Query: 563 AP----YVEMANIYALGGRWDGVANLRTMMKR 590
P Y+ M N A G + + T++++
Sbjct: 527 KPDKVTYINMLNACANSGSLEWAREIHTLVRK 558
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/594 (35%), Positives = 332/594 (55%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I +A LF+RM++ ++P+ + F + +AC + +H +
Sbjct: 280 WTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK 339
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + ++I+V T ++ MY KC ++ A ++FD + R+V SW AMI GFAQ G +++
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M GI+ + VT M + A L + + I G +D V +S YA
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC LK A VF I + + VV+WN++I +++D++L ++ ++ +G +P+ +T
Sbjct: 460 KCGSLKDAHRVFEKISK--QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTF 517
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L+ C ++L G+ VH + G + D+ V N L+SM+ CGD+ SA+ LF+ M
Sbjct: 518 TSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPK 577
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW +I+G+ Q G A F M+ +G PD +T +++ C AL G+
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRL 637
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+V+V LI MY+KCGSI DA ++F+ LP+K V SWT+MI G A +G
Sbjct: 638 HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRG 697
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL+LF+QM + ++P+ +TF+ L AC HAG +E+G +F M K + + P + HY C
Sbjct: 698 KEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGC 756
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL GR G L EA++F+ M ++ D+ +WG LL AC++H N+E+ E A + EL+P+
Sbjct: 757 MVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPND 816
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+V ++NIYA G W VA +R +M V K PGQS + ++GK TF +D
Sbjct: 817 NGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDD 870
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 288/580 (49%), Gaps = 37/580 (6%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WN + V +A L +M ++ ++P+ TF + ACA + +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++ I+K+ + +D+FV T +++M+ KC + A K+FD +P RD+ +W +MI G A+ G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ LF M G+Q D V + L +A H + L K VH+ +G D ++ V
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S Y KC ++ A VF ++ R VVSW ++I G + D++ F+ MI G
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKG--RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P+ T +S+L +C P AL +G+ + H I G+ D V L+SMY+KCG + A
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+ + + V+W AMI+ Y Q D AL F A+ G P+ T S+++ C S +
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LELGKW GL+ ++ V NAL+ M+ CG + A+ LF +P++ +VSW T+IAG
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEK----- 478
+G+ A D F M E ++P+++TF +L AC HA E
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCD 649
Query: 479 ---GWGYFNLMTK---------VYQVNPELNHYSCMADLLG--RKGKLKEALDFVQSMPI 524
G G ++ TK V+ P+ N YS + + G + G+ KEAL+ M
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQ 709
Query: 525 KSDAGIWGTL---LCACKIHRNIEIG--EYVAYRLFELEP 559
+ W T L AC IE G + + + F +EP
Sbjct: 710 EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEP 749
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 264/507 (52%), Gaps = 6/507 (1%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
++A+ + R+ + I+ T+ + + C K + + I+ HI KS DIF+ T+
Sbjct: 92 NEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTL 151
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
++MYAKC A ++FD M ++DV SWN ++ G+ Q G E+ L M ++ D
Sbjct: 152 INMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
T + + A A+++ + +++ + G D D+ V I+ + KC D+ A VF
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ R +V+W S+I G +F + N ++ M +G +PD VSLL +C PEAL
Sbjct: 272 LP--TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
QG+ VH+ G+D ++ V ++SMY+KCG ++ A +FD + R VSWTAMI+G+A
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q G +DEA F M +G P+ VT +S++ C AL+ G+ ++ G +
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V AL+ MY+KCGS+ DA +F + ++ VV+W MI + ++ AL F +++
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++PN TF ++L C + LE G W +F +M + +L+ + + + G L
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMS 567
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIH 541
A + MP K D W T++ H
Sbjct: 568 AKNLFNDMP-KRDLVSWNTIIAGFVQH 593
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 227/452 (50%), Gaps = 7/452 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ + + W + I +A L F +M ++ IEPN +TF I AC+ S
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
Q I HI+++ + SD V+T ++ MYAKC L A+++F+K+ ++V +WNAMI + Q
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ L F + GI+ + T + + L L K VH + G+++D+ V
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHV 551
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N +S + C DL A+ +F + + R +VSWN+II G K + ++++ M
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMPK--RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G +PD T LL++C PEAL +GR +H+ FD DV V LISMY+KCG I+ A
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDA 669
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F + + SWT+MI+GYAQ G EAL LF+ M+ G PD +T + +S C +
Sbjct: 670 HQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHA 729
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWT 429
G +E G ++ + ++D++ + G + +A E + P+ V W
Sbjct: 730 GLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRV--WG 787
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
++ C ++ A + +ELD N V
Sbjct: 788 ALLGACQVHLNVELAEKAAQKKLELDPNDNGV 819
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 334/611 (54%), Gaps = 3/611 (0%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L RL + ++ WN IR A+ L+ M + PN T+PF+ KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
L IH H SD+FV T +VD YAKC L A +LF M RDV +WNA
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MI G + G + + L M+ GI + T++G+ AK L K++H + +
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D V V + YAKC L A +F + G+R VSW+++IGG D ++L
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVM--GVRNEVSWSAMIGGYVASDCMKEALEL 298
Query: 246 YRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+ MI D P T+ S+L +C L +GR +H + I G LD+ + NTL+SMY+
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYA 358
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCG ID A FD M + VS++A++SG Q G+ AL +F M+ +G PDL T+L
Sbjct: 359 KCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++ C AL+ G Y G + ++CNALIDMYSKCG I ARE+F +
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+VSW MI G ++G +EAL LFH ++ L L+P+ +TF+ +L +C+H+G + +G +F+
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
M++ + + P + H CM D+LGR G + EA F+++MP + D IW LL AC+IH+NI
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 598
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
E+GE V+ ++ L P S +V ++NIY+ GRWD A++R K +KK PG S + I
Sbjct: 599 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 658
Query: 605 NGKTCTFTVED 615
NG F D
Sbjct: 659 NGIVHAFVGGD 669
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 242/486 (49%), Gaps = 11/486 (2%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ +AC + ++ IH H +K+ +D V + +Y C+++ A +LFD++P+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V WN +I +A G + + L+++M +G++ + T + +A + +HS
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
G+++DV VC + YAKC L A+ +F + R VV+WN++I GC+
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH--RDVVAWNAMIAGCSLYGLC 191
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
DD++ M +G P+ +T+V +L + +AL G+ +H + + FD V V L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PD 358
+ MY+KC + AR +FD M R VSW+AMI GY + EAL LF M + P
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPT 311
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT+ S++ C + L G+ Y G ++++ N L+ MY+KCG I DA F
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFD 371
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ K VS++ +++GC NG AL +F M + P+ T L VL AC+H L+
Sbjct: 372 EMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQH 431
Query: 479 GW---GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
G+ GY L+ + + + + + + D+ + GK+ A + M + D W ++
Sbjct: 432 GFCSHGY--LIVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMI 486
Query: 536 CACKIH 541
IH
Sbjct: 487 IGYGIH 492
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 198/398 (49%), Gaps = 6/398 (1%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L +A I +K L+ K +H + +AD SV + Y CN + +A +F I
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-- 71
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+V+ WN II + FD +++ Y M++ G RP+ T +L +C A+ G +
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
HSH +G + DV V L+ Y+KCG + A+ LF M R V+W AMI+G + G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
D+A++L M+ G P+ T++ ++ G++ AL GK Y + V+V L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPN 459
+DMY+KC + AR++F + + VSW+ MI G + EAL+LF QM+ D + P
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPT 311
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VT +VL+AC L +G + K+ V L + ++ + + G + +A+ F
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLS-MYAKCGVIDDAIRFF 370
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
M K D+ + ++ C + N + + +R+ +L
Sbjct: 371 DEMNPK-DSVSFSAIVSGCVQNGNAAVALSI-FRMMQL 406
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
L ++ C QS +L K + + V + L +Y C + AR LF +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+V+ W +I A NG F A+DL+H M+ L +RPN+ T+ VL+AC+ +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ K++ + ++ + + D + G L EA SM + D W ++ C ++
Sbjct: 132 HS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/595 (35%), Positives = 335/595 (56%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + E + ++ LF++M + +E ++ TF ++K+ + L + +HG+I+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYIL 222
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F V ++V Y K R+D A K+FD+M +RDV SWN++I G+ G EK L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M GI+ D T++ + ++ +SL ++VH FG+ + CNT + Y+
Sbjct: 283 VFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYS 342
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL A++VFR E R+VVS+ S+I G +++ + M +G PDV TV
Sbjct: 343 KCGDLDSAKVVFR--EMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++L+ C L +G+ VH D+ V N L+ MY+KCG + A +F M
Sbjct: 401 TAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRV 460
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKW 380
+ +SW +I GY++ +EAL LF + PD TV ++ C A + G+
Sbjct: 461 KDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y G + V N+L+DMY+KCG++ AR LF + K +VSWT MIAG ++G
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGF 580
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA+ LF+QM + + P+ ++F+++L AC+H+G +++GW +FN+M ++ P + HY+
Sbjct: 581 GKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ D+L R G L +A F+++MPI DA IWG LLC C+IH ++++ E VA ++FELEP
Sbjct: 641 CIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPE 700
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV MANIYA +W+ V LR + + ++K PG S + I G+ F D
Sbjct: 701 NTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 249/502 (49%), Gaps = 18/502 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ N+Q+R + A+ L K DI+P T + + CA + +
Sbjct: 60 SVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVD 117
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I + F D + + + MY C L A ++FD++ WN ++ A+ G
Sbjct: 118 NFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFS 177
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF M G++ D T ++++ + ++ + +H + + G SV N+ +
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLV 237
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y K + + A VF + E R V+SWNSII G + L+ + M++ G D
Sbjct: 238 AFYLKNHRVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEID 295
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ T+VS+ + C + GR VH G+ F + NTL+ MYSKCGD+DSA+ +F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFR 355
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M R+ VS+T+MI+GYA++G EA++LF ME G PD+ TV ++++ C ++ L+
Sbjct: 356 EMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDE 415
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + + ++ V NAL+DMY+KCGS+ +A +F + K ++SW T+I G +
Sbjct: 416 GKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSK 475
Query: 438 NGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGW---------GYFNLMT 487
N EAL LF+ ++ E P+ T VL AC +KG GYF +
Sbjct: 476 NCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF---S 532
Query: 488 KVYQVNPELNHYS-CMADLLGR 508
+ N ++ Y+ C A LL R
Sbjct: 533 DRHVANSLVDMYAKCGALLLAR 554
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 7/333 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ + S I + A +A+ LF M++ I P+ T + CA+ + +H
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVH 420
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I ++ DIFV ++DMYAKC + A +F +M +D+ SWN +I G+++ +
Sbjct: 421 EWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYAN 480
Query: 138 KVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF N+ LV D TV + A + +H + + G +D V N+
Sbjct: 481 EALSLF-NLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC L +A L+F I + +VSW +I G +++ + M G
Sbjct: 540 LVDMYAKCGALLLARLLFDDITS--KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 256 PDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-R 313
PD + VSLL +C + +G R + + V ++ M ++ G++ A R
Sbjct: 598 PDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYR 657
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
F+ + W A++ G D+ A R+
Sbjct: 658 FIENMPIPPDATIWGALLCGCRIHHDVKLAERV 690
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/606 (35%), Positives = 335/606 (55%), Gaps = 4/606 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N + R I W S I + +A LF+ M++ ++P+ + F + KAC
Sbjct: 263 FNNLPRRDLIT-WTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEA 321
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ +H + + ++I+V T ++ MY KC ++ A ++F+ + R+V SW AMI G
Sbjct: 322 LEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
FAQ G +E+ F M GI+ + VT M + A L + +H I G D
Sbjct: 382 FAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD 441
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V +S YAKC L A VF I + + VV+WN++I +K+D+++ ++ +
Sbjct: 442 DRVRTALLSMYAKCGSLMDARNVFERISK--QNVVAWNAMITAYVQHEKYDNAVATFQAL 499
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+ +G +PD +T S+L+ C P+AL G+ V S I GF+ D+ + N L+SM+ CGD+
Sbjct: 500 LKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDL 559
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
SA LF+ M +R VSW +I+G+ Q G+ A F M+ +G PD +T +++ C
Sbjct: 560 MSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNAC 619
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
AL G+ L +V+V LI MY+KCGSI DA +F+ LP+K V SWT
Sbjct: 620 ASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWT 679
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+MI G A +G EAL+LF QM + ++P+ +TF+ L AC HAG +++G +F M K
Sbjct: 680 SMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KD 738
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P + HY CM DL GR G L EA++F+ M +K D+ +WG LL AC++H ++E+ E
Sbjct: 739 FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEK 798
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA + EL+P+ YV ++NIYA G W V +R +M V K PGQS + ++G+
Sbjct: 799 VAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVH 858
Query: 610 TFTVED 615
F +D
Sbjct: 859 IFCSDD 864
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 287/576 (49%), Gaps = 37/576 (6%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN + V +A L +M ++ ++P+ TF ++ ACA + +
Sbjct: 170 VYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFS 229
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
I+ + + +D+FV T +++M+ KC +D A K+F+ +P RD+ +W +MI G A+ ++
Sbjct: 230 LILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQ 289
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
LF M G+Q D V + L +A H + L K VH+ +G+D ++ V +S
Sbjct: 290 ACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS 349
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC ++ A VF ++ R VVSW ++I G + +++ F+ MI G P+
Sbjct: 350 MYTKCGSMEDALEVFNLVKG--RNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNR 407
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +S+L +C P AL QGR +H I G+ D V L+SMY+KCG + AR +F+
Sbjct: 408 VTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFER 467
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + V+W AMI+ Y Q D A+ F A+ G PD T S+++ C ALELG
Sbjct: 468 ISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG 527
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
KW + G + ++ + NAL+ M+ CG + A LF +PE+ +VSW T+IAG +
Sbjct: 528 KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQH 587
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEK--------G 479
GE A D F M E ++P+++TF +L AC HA E G
Sbjct: 588 GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVG 647
Query: 480 WGYFNLMTK---------VYQVNPELNHYSCMADLLG--RKGKLKEALDF---VQSMPIK 525
G ++ TK V+ P+ N YS + + G + G+ KEAL+ +Q +K
Sbjct: 648 TGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVK 707
Query: 526 SDAGIWGTLLCACKIHRNIEIG--EYVAYRLFELEP 559
D + L AC I+ G + + + F +EP
Sbjct: 708 PDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEP 743
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 258/499 (51%), Gaps = 4/499 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+L+ + I+ + T+ + + C K + + IH HI S DIF+ ++
Sbjct: 87 EAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLI 146
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MYAKC + A ++FD+MPD+DV SWN ++ G+ Q E+ L M G++ D
Sbjct: 147 SMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKY 206
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + + A AK++ + S ++ G D D+ V I+ + KC + A VF +
Sbjct: 207 TFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNL 266
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R +++W S+I G +F + N ++ M +G +PD VSLL +C PEAL Q
Sbjct: 267 PR--RDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQ 324
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ VH+ G D ++ V L+SMY+KCG ++ A +F+ + R VSWTAMI+G+AQ
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQ 384
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G ++EA F M +G P+ VT +S++ C + AL+ G+ + G + V
Sbjct: 385 HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRV 444
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
AL+ MY+KCGS+ DAR +F + ++ VV+W MI + ++ A+ F +++ +
Sbjct: 445 RTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGI 504
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
+P+ TF ++L C LE G +L+ + +L+ + + + G L A+
Sbjct: 505 KPDSSTFTSILNVCKSPDALELGKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDLMSAM 563
Query: 517 DFVQSMPIKSDAGIWGTLL 535
+ MP + D W T++
Sbjct: 564 NLFNDMP-ERDLVSWNTII 581
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/592 (34%), Positives = 333/592 (56%), Gaps = 4/592 (0%)
Query: 26 IREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPF 85
I + N A ++ M+ D E +N P + KAC + FL Q +HG +VK+ F
Sbjct: 96 ITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGF 155
Query: 86 WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN 145
D+FV ++ MY++ L A LFDK+ ++DV SW+ MI + + G L++ L L +
Sbjct: 156 HGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRD 215
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV--DADVSVCNTWISAYAKC 203
M ++ ++ + ++ +T L L K++H++ + G + V +C I Y KC
Sbjct: 216 MHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKC 275
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
+L A VF G+ + +++SW ++I + + ++ + + M+ +G P+ T++S
Sbjct: 276 ENLAYARRVFDGLSKA--SIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
L+ C AL G+L+H+ + GF L + + I MY KCGD+ SAR +FD +
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+ W+AMIS YAQ +DEA +F M G P+ T++S++ C ++G+LE+GKW +
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHS 453
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
Y G+K ++++ + +DMY+ CG I A LF ++ + W MI+G A++G
Sbjct: 454 YIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEA 513
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
AL+LF +M L + PN +TF+ L AC+H+G L++G F+ M + P++ HY CM
Sbjct: 514 ALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMV 573
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAA 563
DLLGR G L EA + ++SMP++ + ++G+ L ACK+H+NI++GE+ A + LEPH +
Sbjct: 574 DLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSG 633
Query: 564 PYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V M+NIYA RW VA +R MK + K PG S + +NG F + D
Sbjct: 634 YNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGD 685
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 207/422 (49%), Gaps = 6/422 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W++ IR +AL L R M ++P+ + I A+L+D + +H ++
Sbjct: 192 SWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYV 251
Query: 81 VKSPFW--SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ S + + T ++DMY KC+ L A ++FD + + SW AMI + L +
Sbjct: 252 MRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNE 311
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ LF M G+ + +T++ L + A L L K +H+F + G + + +I
Sbjct: 312 GVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFID 371
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC D++ A VF + + ++ W+++I + D++ + + HM G RP+
Sbjct: 372 MYGKCGDVRSARSVFDSFKS--KDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNE 429
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+VSLL C +L G+ +HS+ G D+ + + + MY+ CGDID+A LF
Sbjct: 430 RTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE 489
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
DR W AMISG+A G + AL LF MEA G P+ +T + + C SG L+ G
Sbjct: 490 ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEG 549
Query: 379 K-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCA 436
K F G V ++D+ + G + +A EL ++P + + + + +A C
Sbjct: 550 KRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACK 609
Query: 437 LN 438
L+
Sbjct: 610 LH 611
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 3/311 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
++I W + I + N ++ + LF +M + PN +T + K C +++
Sbjct: 291 ASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLL 350
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +++ F + + T +DMY KC + A +FD +D+ W+AMI +AQ +
Sbjct: 351 HAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCI 410
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ +F +M GI+ + T++ L A L + K +HS+ G+ D+ + ++
Sbjct: 411 DEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSF 470
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YA C D+ A +F E R + WN++I G + +L + M G P
Sbjct: 471 VDMYANCGDIDTAHRLF--AEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTP 528
Query: 257 DVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
+ T + L +C L +G RL H +GF V ++ + + G +D A L
Sbjct: 529 NDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHEL 588
Query: 316 FDGMCDRTRVS 326
M R ++
Sbjct: 589 IKSMPMRPNIA 599
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
++S + W++ I N +A +F M I PN T + CAK
Sbjct: 389 FKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG 448
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH +I K D+ ++T+ VDMYA C +D A++LF + DRD++ WNAMI GFA
Sbjct: 449 KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMH 508
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS-----LLKSVHSFG 181
G E L LF M +G+ + +T +G A H+ L K VH FG
Sbjct: 509 GHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFG 561
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%)
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+I+ Y + +A +++ M D + S++ C + LG+ + G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+V VCNALI MYS+ GS+ AR LF + K VVSW+TMI +G EALDL
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
M + ++P+ + +++ L+ G
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLG 244
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/590 (36%), Positives = 335/590 (56%), Gaps = 3/590 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + E +++ LF++M+K + N TF + K A L + +HG+++
Sbjct: 163 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 222
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S+ V +++ Y K ++ A+ LFD++ + DV SWN+MI G GF L
Sbjct: 223 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 282
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M ++G++ D T++ + A + +LSL +++H FG+ +V NT + Y+
Sbjct: 283 IFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 342
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L A VF ++ G T+VSW SII + D++ + M G RPD+ TV
Sbjct: 343 KCGNLNGATEVF--VKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 400
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S++ +C C +L +GR VHS+ I G ++ V N LI+MY+KCG ++ AR +F +
Sbjct: 401 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 460
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW MI GY+Q +EAL LF M+ + PD +T+ ++ C AL+ G+
Sbjct: 461 KDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREI 519
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G ++ V AL+DMY+KCG + A+ LF +P+K ++SWT MIAG ++G
Sbjct: 520 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 579
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA+ F++M + P+ +F A+L AC+H+G L +GW +FN M V P+L HY+C
Sbjct: 580 NEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 639
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R G L +A F++SMPIK D IWG LL C+IH ++++ E VA +FELEP +
Sbjct: 640 VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDN 699
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
YV +AN+YA +W+ V LR M++ K+ PG S + + GK F
Sbjct: 700 TRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIF 749
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 170/570 (29%), Positives = 283/570 (49%), Gaps = 30/570 (5%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
+ P S T NQ N++I + + + A+ L + K ++ N ++ + + CA
Sbjct: 49 VSPSFTNTTHSVTQNQ-NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCA 105
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+ + +H I+ + D + +V MY C L K+FDK+ + V WN
Sbjct: 106 EKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNL 165
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
++ +A++G + + LF M+ +G+ + T + + + K VH + + +G
Sbjct: 166 LMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 225
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
++ +V N+ I+AY K ++ A +F + E VVSWNS+I GC + L
Sbjct: 226 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE--PDVVSWNSMINGCVVNGFSGNGLEI 283
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M+ G D+TT+VS+L +C L GR +H G+ F +V NTL+ MYSK
Sbjct: 284 FIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 343
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG+++ A +F M D T VSWT++I+ Y ++G +A+ LF M++ G PD+ TV S+
Sbjct: 344 CGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 403
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ C S +L+ G+ +Y G+ N+ V NALI+MY+KCGS+ +AR +F +P K +
Sbjct: 404 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 463
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG------ 479
VSW TMI G + N EAL+LF M + +P+ +T VL AC L+KG
Sbjct: 464 VSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGH 522
Query: 480 ---WGYFNLMTKVYQVNPELNHYSC-MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
GYF+ + H +C + D+ + G L A +P K D W ++
Sbjct: 523 ILRRGYFSDL-----------HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMI 570
Query: 536 CACKIH--RNIEIGEYVAYRLFELEPHSAA 563
+H N I + R+ +EP ++
Sbjct: 571 AGYGMHGFGNEAISTFNEMRIAGIEPDESS 600
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 154/319 (48%), Gaps = 5/319 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+TI W S I V + A+ LF M+ + P+ T I ACA S + +
Sbjct: 360 TTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 419
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +++K+ S++ V +++MYAKC ++ A +F K+P +D+ SWN MI G++Q
Sbjct: 420 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLP 479
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L LF +M+ + D +T+ + A L + +H + G +D+ V
Sbjct: 480 NEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 538
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC L +A+L+F I + + ++SW +I G +++++ + M G P
Sbjct: 539 VDMYAKCGLLVLAQLLFDMIPK--KDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEP 596
Query: 257 DVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D ++ ++L++C L +G + +S G + + ++ + ++ G++ A
Sbjct: 597 DESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKF 656
Query: 316 FDGMCDRTRVS-WTAMISG 333
+ M + + W ++SG
Sbjct: 657 IESMPIKPDTTIWGVLLSG 675
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/601 (36%), Positives = 346/601 (57%), Gaps = 8/601 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I+ WN + +AL LF ++ ++P++ T+P + KAC L ++ +MIH
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIH 129
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+VK+ DI V +++V MYAKC+ + A LF++MP++DVA WN +I + Q G +
Sbjct: 130 TCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F MR G + + VT+ + L+ +H I+ G D + + +
Sbjct: 190 EALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALV 249
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD--SLNFYRHMIYDGFR 255
Y KC L+MA VF + + +TVV+WNS+I G YG K D + ++ M +G +
Sbjct: 250 DMYGKCGHLEMAIEVFEQMPK--KTVVAWNSMISG--YGLKGDSISCIQLFKRMYNEGVK 305
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P +TT+ SL+ C L++G+ VH + I DV + ++L+ +Y KCG ++ A +
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENI 365
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + VSW MISGY +G L EAL LF M + PD +T S+++ C Q AL
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAAL 425
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E G+ N L +N +V AL+DMY+KCG++ +A +F LP++ +VSWT+MI
Sbjct: 426 EKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+G+ AL+LF +M++ +++P+RVTFLA+L AC HAG +++G YFN M VY + P
Sbjct: 486 GSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPR 545
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HYSC+ DLLGR G+L EA + +Q P I+ D + TL AC++HRNI++G +A L
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
+ +P ++ Y+ ++N+YA +WD V +R+ MK +KK PG S + IN K F VE
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVE 665
Query: 615 D 615
D
Sbjct: 666 D 666
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/498 (29%), Positives = 249/498 (50%), Gaps = 10/498 (2%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR- 118
+ +AC ++IH +V +DIF+ ++++Y C D A +FD M +
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
+++ WN ++ G+ + + L LF + ++ D T + +A L K +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H+ + G+ D+ V ++ + YAKCN + A +F + E + V WN++I
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPE--KDVACWNTVISCYYQSG 186
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
F ++L ++ M GF P+ T+ + +SSC L +G +H I+ GF LD + +
Sbjct: 187 NFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MY KCG ++ A +F+ M +T V+W +MISGY KGD ++LF M G P
Sbjct: 247 ALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKP 306
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
L T+ S+I C +S L GK+ Y ++ +V + ++L+D+Y KCG + A +F
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIF 366
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+P+ VVSW MI+G G+ EAL LF +M + + P+ +TF +VL AC+ LE
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALE 426
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
KG NL+ + N E+ + D+ + G + EA + +P K D W +++ A
Sbjct: 427 KGEEIHNLIIEKKLDNNEVV-MGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMITA 484
Query: 538 CKIHRNIEIGEYVAYRLF 555
H YVA LF
Sbjct: 485 YGSHGQ----AYVALELF 498
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 142/296 (47%), Gaps = 3/296 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS I K ++ + LF+RM ++P T + C++ + L + +H
Sbjct: 272 TVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVH 331
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ +++ SD+F+ ++++D+Y KC +++ A +F +P V SWN MI G+ G L
Sbjct: 332 GYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLF 391
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF MR ++ D +T + A L + +H+ I +D + V +
Sbjct: 392 EALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALL 451
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + A VF+ + + R +VSW S+I + +L + M+ +PD
Sbjct: 452 DMYAKCGAVDEAFSVFKCLPK--RDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPD 509
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSA 312
T +++LS+C + +G + ++ YG V + LI + + G + A
Sbjct: 510 RVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEA 565
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 140/282 (49%), Gaps = 6/282 (2%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D ++ LL +C+ ++L QG+L+H + G D+ + LI++Y C D A+ +F
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61
Query: 317 DGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGA 374
D M + +S W +++GY + EAL LF + + PD T S++ CG
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYK 121
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LGK GL +++V ++L+ MY+KC + A LF +PEK V W T+I+
Sbjct: 122 YVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISC 181
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVN 493
+G F EAL+ F M PN VT + +C L +G + L+ + ++
Sbjct: 182 YYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD 241
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ S + D+ G+ G L+ A++ + MP K+ W +++
Sbjct: 242 SFIS--SALVDMYGKCGHLEMAIEVFEQMPKKTVVA-WNSMI 280
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
L + K+ S + WN I V + + +AL LF M+K+ +EP+ +TF + AC
Sbjct: 360 ELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTAC 419
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
++L+ + IH I++ ++ V ++DMYAKC +D A+ +F +P RD+ SW
Sbjct: 420 SQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWT 479
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+MI + G L LF M ++ D VT + + A HA
Sbjct: 480 SMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHA 523
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/600 (35%), Positives = 332/600 (55%), Gaps = 2/600 (0%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ WN+ I +A LFR+M +EP+ +TF + AC+ + +
Sbjct: 124 NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKE 183
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
H ++K F SD + T +V MY K +D A ++FD + RDV+++N MI G+A+ G
Sbjct: 184 FHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGD 243
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
EK LFY M+ G + + ++ + + + L+ K+VH+ ++ G+ DV V
Sbjct: 244 GEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATA 303
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I Y C ++ A VF ++ +R VVSW +I G +D+ + M +G +
Sbjct: 304 LIRMYMGCGSIEGARRVFDKMK--VRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQ 361
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD T + ++++C L R +HS + GF D+ V L+ MY+KCG I AR +
Sbjct: 362 PDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQV 421
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M R VSW+AMI Y + G +EA F M+ PD+VT +++++ CG GAL
Sbjct: 422 FDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGAL 481
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+LG A L ++ V NALI+M K GSI AR +F + ++ VV+W MI G
Sbjct: 482 DLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGY 541
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+L+G EALDLF +M++ RPN VTF+ VL AC+ AGF+E+G +F+ + + P
Sbjct: 542 SLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPT 601
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ Y CM DLLGR G+L EA + MP+K ++ IW TLL AC+I+ N+++ E A R
Sbjct: 602 MELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCL 661
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP+ A YV+++++YA G W+ VA +R +M+ V+K G + + + GK TF VED
Sbjct: 662 MSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVED 721
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 258/503 (51%), Gaps = 4/503 (0%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
+ R+ + ++ T+ + + C L D + + HI++S +I+ T++ +++
Sbjct: 48 VLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHS 107
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
C + A + FD + ++ V +WNA+I G+AQ+G +++ LF M ++ +T +
Sbjct: 108 ICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLI 167
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ A L L K H+ I +G +D + +S Y K + A VF G+ +
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYK-- 225
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R V ++N +IGG + + + M +GF+P+ + +S+L C PEAL G+ V
Sbjct: 226 RDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAV 285
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+ ++ G DV V LI MY CG I+ AR +FD M R VSWT MI GYA+ ++
Sbjct: 286 HAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNI 345
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
++A LF M+ G PD +T + +I+ C S L L + + G +++V AL
Sbjct: 346 EDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTAL 405
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+ MY+KCG+I DAR++F A+ + VVSW+ MI NG EA + FH M ++ P+
Sbjct: 406 VHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDV 465
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VT++ +L AC H G L+ G + K V+ + + + ++ + G ++ A +
Sbjct: 466 VTYINLLNACGHLGALDLGMEIYTQAIKADLVS-HIPVGNALINMNVKHGSIERARYIFE 524
Query: 521 SMPIKSDAGIWGTLLCACKIHRN 543
+M ++ D W ++ +H N
Sbjct: 525 NM-VQRDVVTWNVMIGGYSLHGN 546
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/560 (37%), Positives = 316/560 (56%), Gaps = 4/560 (0%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F + + CA+L + +H I+KS + +++ T++ MYAKC L A ++FD +
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 117 DRDVASWNAMIVGF-AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
DR++ SW AMI F A LE C + M+L G + D VT + L A + + L + +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKC-YETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQ 217
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
VH G++ + V + + YAKC D+ A+++F + E + VV+W +I G
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPE--KNVVTWTLLIAGYAQ 275
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+ D +L M P+ T S+L C P AL G+ VH + I G+ ++ V
Sbjct: 276 QGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWV 335
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
+N LI+MY KCG + AR LF + R V+WTAM++GYAQ G DEA+ LF M+ G
Sbjct: 336 VNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGI 395
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
PD +T S ++ C L+ GK G +V + +AL+ MY+KCGS+ DAR
Sbjct: 396 KPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARL 455
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F + E+ VV+WT MI GCA +G EAL+ F QM + ++P++VTF +VL ACTH G
Sbjct: 456 VFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGL 515
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+E+G +F M Y + P + HYSC DLLGR G L+EA + + +MP + +WG LL
Sbjct: 516 VEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALL 575
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
AC+IH ++E GE A + +L+P YV ++NIYA GR++ +R +M++ V K
Sbjct: 576 SACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVK 635
Query: 596 FPGQSLVHINGKTCTFTVED 615
PGQS + ++GK F VED
Sbjct: 636 EPGQSWIEVDGKVHVFHVED 655
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 221/443 (49%), Gaps = 4/443 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R I W + I V N+ +A + MK +P+ +TF + A Q
Sbjct: 158 RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQ 217
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H I K+ + V T++V MYAKC + A +FDK+P+++V +W +I G+AQ G
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ L L M+ + + +T + Q L K VH + I G ++ V N
Sbjct: 278 QVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVN 337
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I+ Y KC LK A +F + R VV+W +++ G D++++ +R M G
Sbjct: 338 ALITMYCKCGGLKEARKLFGDLPH--RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGI 395
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD T S L+SC P L +G+ +H +H G+ LDV + + L+SMY+KCG +D AR
Sbjct: 396 KPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARL 455
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+ M +R V+WTAMI+G AQ G EAL F M+ G PD VT S++S C G
Sbjct: 456 VFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGL 515
Query: 375 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMI 432
+E G K F + G+K V + +D+ + G + +A + +P + S W ++
Sbjct: 516 VEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALL 575
Query: 433 AGCALNGEFVEALDLFHQMMELD 455
+ C ++ + +++LD
Sbjct: 576 SACRIHSDVERGERAAENVLKLD 598
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 219/420 (52%), Gaps = 7/420 (1%)
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ G L++ L + M L G + GL Q + L + VH+ + G+ +
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ NT +S YAKC L A VF GI + R +VSW ++I G++ ++ Y M
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRD--RNIVSWTAMIEAFVAGNQNLEAYKCYETMKL 190
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G +PD T VSLL++ PE L G+ VH G +L+ V +L+ MY+KCGDI
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISK 250
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A+ +FD + ++ V+WT +I+GYAQ+G +D AL L M+ A P+ +T S++ GC
Sbjct: 251 AQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTT 310
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
ALE GK Y G + V NALI MY KCG + +AR+LF LP + VV+WT M
Sbjct: 311 PLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAM 370
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVY 490
+ G A G EA+DLF +M + ++P+++TF + L +C+ FL++G + L+ Y
Sbjct: 371 VTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY 430
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIEIGEY 549
++ L S + + + G + +A M + + W ++ C H R E EY
Sbjct: 431 SLDVYLQ--SALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGCAQHGRCREALEY 487
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 155/309 (50%), Gaps = 15/309 (4%)
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
C G + ++L MI G R LL C +L QGR VH+ + G +
Sbjct: 72 CKQG-RLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 130
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ NTL+SMY+KCG + AR +FDG+ DR VSWTAMI + EA + + M+
Sbjct: 131 RYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL 190
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
AG PD VT +S+++ L++G+ GL+ V +L+ MY+KCG I
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISK 250
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A+ +F LPEK VV+WT +IAG A G+ AL+L +M + ++ PN++T+ ++LQ CT
Sbjct: 251 AQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTT 310
Query: 473 AGFLEKGWGYFNLMTK------VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
LE G + + ++ VN + Y + G LKEA +P +
Sbjct: 311 PLALEHGKKVHRYIIQSGYGREIWVVNALITMYC-------KCGGLKEARKLFGDLPHR- 362
Query: 527 DAGIWGTLL 535
D W ++
Sbjct: 363 DVVTWTAMV 371
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 329/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V A+ LF M+ + EPN T A SD + +H V
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S++ V T+V MYAKC LD +KLF MP D+ +WN MI G Q GF+++ L
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M+ GI+ D VT++ L A + K +H + + V DV + + + Y
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYF 394
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++MA+ V+ + VV +++I G +++ +R+++ G RP+ +
Sbjct: 395 KCRAVRMAQSVYDSSKA--IDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAI 452
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C A+ G+ +HS+ + ++ V + L+ MY+KCG +D + ++F +
Sbjct: 453 ASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISA 512
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W +MIS +AQ G+ +EAL LF M G VT+ S++S C A+ GK
Sbjct: 513 KDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEI 572
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G ++ ++ +ALIDMY KCG++ A +F ++PEK VSW ++IA G
Sbjct: 573 HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLV 632
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E++ L M E + + VTFLA++ AC HAG +++G F MT+ YQ+ P + H++C
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC 692
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL R GKL +A++ + MP K DAGIWG LL AC++HRN+E+ E + LF+L+PH+
Sbjct: 693 MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHN 752
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV M+NI A+ GRWDGV+ +R +MK +V+K PG S V +N + F D
Sbjct: 753 SGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAAD 806
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 257/518 (49%), Gaps = 6/518 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN IR + ALL + +M + P++ TFP++ K+CA L +++H
Sbjct: 112 WNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRT 171
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
D+FV + ++ MYA L A ++FD M +RD WN M+ G+ + G +
Sbjct: 172 ARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSA 231
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF +MR G + +F T+ + L +H+ + G++++V+V NT +S
Sbjct: 232 VELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSM 291
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC L +F + +V+WN +I GC D +L + M G RPD
Sbjct: 292 YAKCKCLDDGWKLFGLMPRD--DLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+VSLL + QG+ +H + + +DV +++ L+ +Y KC + A+ ++D
Sbjct: 350 TLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSS 409
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
V + MISGY G EA+++F + G P+ V + S++ C A++LG+
Sbjct: 410 KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQ 469
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+YA + V +AL+DMY+KCG + + +F + K V+W +MI+ A NG
Sbjct: 470 ELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNG 529
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
E EAL+LF +M ++ + VT +VL AC + G ++ K + +L
Sbjct: 530 EPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK-GPIRADLFAE 588
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
S + D+ G+ G L+ A +SMP K++ W +++ +
Sbjct: 589 SALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIAS 625
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 193/426 (45%), Gaps = 8/426 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
+ + C S +HG V + +D +QT +V MY R A +F +P
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 119 DVA---SWNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSL 173
A WN +I G G L + M D T + ++ ++L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ VH +G+D D+ V + I YA L A VF G+ E R V WN ++ G
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAE--RDCVLWNVMMDGY 222
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
++ + M G P+ T+ LS L G +H+ + YG + +V
Sbjct: 223 VKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEV 282
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+V NTL+SMY+KC +D LF M V+W MISG Q G +D+AL LF M+ +
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD VT++S++ GK Y + +V + +AL+D+Y KC ++ A
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMA 402
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+ ++ + VV +TMI+G LNG EA+ +F ++E +RPN V +VL AC
Sbjct: 403 QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASM 462
Query: 474 GFLEKG 479
++ G
Sbjct: 463 AAMKLG 468
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 116/289 (40%), Gaps = 9/289 (3%)
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD-LDVSVINTLISMYSKCGDIDSARF 314
PD ++++L CV P L G VH + G D ++ L+ MY A
Sbjct: 38 PD-RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 315 LFDGM---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA--AGEVPDLVTVLSMISGC 369
+F + + W +I G GD AL + M A + +PD T ++ C
Sbjct: 97 VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
GA+ LG+ A + GL ++ V +ALI MY+ G + DAR++F + E+ V W
Sbjct: 157 AALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWN 216
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
M+ G G A++LF M PN T L L G L K
Sbjct: 217 VMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVK- 275
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
Y + E+ + + + + L + MP + D W ++ C
Sbjct: 276 YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGC 323
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 329/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V A+ LF M+ + EPN T A SD + +H V
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S++ V T+V MYAKC LD +KLF MP D+ +WN MI G Q GF+++ L
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M+ GI+ D VT++ L A + K +H + + V DV + + + Y
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYF 394
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++MA+ V+ + VV +++I G +++ +R+++ G RP+ +
Sbjct: 395 KCRAVRMAQSVYDSSKA--IDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAI 452
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C A+ G+ +HS+ + ++ V + L+ MY+KCG +D + ++F +
Sbjct: 453 ASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISA 512
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W +MIS +AQ G+ +EAL LF M G VT+ S++S C A+ GK
Sbjct: 513 KDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEI 572
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G ++ ++ +ALIDMY KCG++ A +F ++PEK VSW ++IA G
Sbjct: 573 HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLV 632
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E++ L M E + + VTFLA++ AC HAG +++G F MT+ YQ+ P + H++C
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC 692
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL R GKL +A++ + MP K DAGIWG LL AC++HRN+E+ E + LF+L+PH+
Sbjct: 693 MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHN 752
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV M+NI A+ GRWDGV+ +R +MK +V+K PG S V +N + F D
Sbjct: 753 SGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAAD 806
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 257/518 (49%), Gaps = 6/518 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN IR + ALL + +M + P++ TFP++ K+CA L +++H
Sbjct: 112 WNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRT 171
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
D+FV + ++ MYA L A ++FD M +RD WN M+ G+ + G +
Sbjct: 172 ARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSA 231
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF +MR G + +F T+ + L +H+ + G++++V+V NT +S
Sbjct: 232 VELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSM 291
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC L +F + +V+WN +I GC D +L + M G RPD
Sbjct: 292 YAKCKCLDDGWKLFGLMPRD--DLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+VSLL + QG+ +H + + +DV +++ L+ +Y KC + A+ ++D
Sbjct: 350 TLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSS 409
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
V + MISGY G EA+++F + G P+ V + S++ C A++LG+
Sbjct: 410 KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQ 469
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+YA + V +AL+DMY+KCG + + +F + K V+W +MI+ A NG
Sbjct: 470 ELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNG 529
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
E EAL+LF +M ++ + VT +VL AC + G ++ K + +L
Sbjct: 530 EPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK-GPIRADLFAE 588
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
S + D+ G+ G L+ A +SMP K++ W +++ +
Sbjct: 589 SALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIAS 625
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 193/426 (45%), Gaps = 8/426 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
+ + C S +HG V + +D +QT +V MY R A +F +P
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 119 DVA---SWNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSL 173
A WN +I G G L + M D T + ++ ++L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ VH +G+D D+ V + I YA L A VF G+ E R V WN ++ G
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAE--RDCVLWNVMMDGY 222
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
++ + M G P+ T+ LS L G +H+ + YG + +V
Sbjct: 223 VKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEV 282
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+V NTL+SMY+KC +D LF M V+W MISG Q G +D+AL LF M+ +
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD VT++S++ GK Y + +V + +AL+D+Y KC ++ A
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMA 402
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+ ++ + VV +TMI+G LNG EA+ +F ++E +RPN V +VL AC
Sbjct: 403 QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASM 462
Query: 474 GFLEKG 479
++ G
Sbjct: 463 AAMKLG 468
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 116/289 (40%), Gaps = 9/289 (3%)
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD-LDVSVINTLISMYSKCGDIDSARF 314
PD ++++L CV P L G VH + G D ++ L+ MY A
Sbjct: 38 PD-RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 315 LFDGM---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA--AGEVPDLVTVLSMISGC 369
+F + + W +I G GD AL + M A + +PD T ++ C
Sbjct: 97 VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
GA+ LG+ A + GL ++ V +ALI MY+ G + DAR++F + E+ V W
Sbjct: 157 AALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWN 216
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
M+ G G A++LF M PN T L L G L K
Sbjct: 217 VMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVK- 275
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
Y + E+ + + + + L + MP + D W ++ C
Sbjct: 276 YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGC 323
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/586 (35%), Positives = 332/586 (56%), Gaps = 3/586 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + E +++ LF++M+K + N TF + K A L + +HG+++
Sbjct: 438 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 497
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S+ V +++ Y K ++ A+ LFD++ + DV SWN+MI G GF L
Sbjct: 498 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 557
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M ++G++ D T++ + A + +LSL +++H FG+ +V NT + Y+
Sbjct: 558 IFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 617
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L A VF ++ G T+VSW S I + D++ + M G RPD+ TV
Sbjct: 618 KCGNLNGATEVF--VKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 675
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S++ +C C +L +GR VHS+ I G ++ V N LI+MY+KCG ++ AR +F +
Sbjct: 676 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 735
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW MI GY+Q +EAL LF M+ + PD +T+ ++ C AL+ G+
Sbjct: 736 KDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREI 794
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G ++ V AL+DMY+KCG + A+ LF +P+K ++SWT MIAG ++G
Sbjct: 795 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 854
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA+ F++M + P+ +F +L AC+H+G L +GW +FN M V P+L HY+C
Sbjct: 855 NEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 914
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R G L +A F++SMPIK D IWG LL C+IH ++++ E VA +FELEP +
Sbjct: 915 VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDN 974
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
YV +AN+YA +W+ V LR M++ K+ PG S + + GK
Sbjct: 975 TRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGK 1020
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 281/570 (49%), Gaps = 30/570 (5%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
+ P S T NQ N++I + + + A+ L + K ++ N ++ + + CA
Sbjct: 324 VSPSFTNTTHSVTQNQ-NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCA 380
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+ + +H I+ + D + +V MY C L K+FDK+ + V WN
Sbjct: 381 EKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNL 440
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
++ +A++G + + LF M+ +G+ + T + + + K VH + + +G
Sbjct: 441 LMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 500
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
++ +V N+ I+AY K ++ A +F + E VVSWNS+I GC + L
Sbjct: 501 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP--DVVSWNSMINGCVVNGFSGNGLEI 558
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M+ G D+TT+VS+L + L GR +H G+ F +V NTL+ MYSK
Sbjct: 559 FIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 618
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG+++ A +F M D T VSWT+ I+ Y ++G +A+ LF M++ G PD+ TV S+
Sbjct: 619 CGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 678
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ C S +L+ G+ +Y G+ N+ V NALI+MY+KCGS+ +AR +F +P K +
Sbjct: 679 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 738
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG------ 479
VSW TMI G + N EAL+LF M + +P+ +T VL AC L+KG
Sbjct: 739 VSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGH 797
Query: 480 ---WGYFNLMTKVYQVNPELNHYSC-MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
GYF+ + H +C + D+ + G L A +P K D W ++
Sbjct: 798 ILRRGYFSDL-----------HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMI 845
Query: 536 CACKIH--RNIEIGEYVAYRLFELEPHSAA 563
+H N I + R+ +EP ++
Sbjct: 846 AGYGMHGFGNEAISTFNEMRIAGIEPDESS 875
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 153/319 (47%), Gaps = 5/319 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+TI W S I V + A+ LF M+ + P+ T I ACA S + +
Sbjct: 635 TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 694
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +++K+ S++ V +++MYAKC ++ A +F K+P +D+ SWN MI G++Q
Sbjct: 695 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLP 754
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L LF +M+ + D +T+ + A L + +H + G +D+ V
Sbjct: 755 NEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 813
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC L +A+L+F I + + ++SW +I G +++++ + M G P
Sbjct: 814 VDMYAKCGLLVLAQLLFDMIPK--KDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEP 871
Query: 257 DVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D ++ +L++C L +G + +S G + + ++ + ++ G++ A
Sbjct: 872 DESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKF 931
Query: 316 FDGMCDRTRVS-WTAMISG 333
+ M + + W ++SG
Sbjct: 932 IESMPIKPDTTIWGVLLSG 950
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 334/595 (56%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + E + ++ LF++M + +E ++ TF ++K+ + L + +HG I+
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F V ++V Y K R+D A K+FD+M +RDV SWN++I G+ G EK L
Sbjct: 72 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M + GI+ D T++ + ++ +SL ++VHS G+ + CNT + Y+
Sbjct: 132 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 191
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL A+ VFR + + R+VVS+ S+I G +++ + M +G PDV TV
Sbjct: 192 KCGDLDSAKAVFREMSD--RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 249
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++L+ C L +G+ VH D+ V N L+ MY+KCG + A +F M
Sbjct: 250 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SW +I GY++ +EAL LF +E PD TV ++ C A + G+
Sbjct: 310 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 369
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y G + V N+L+DMY+KCG++ A LF + K +VSWT MIAG ++G
Sbjct: 370 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 429
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA+ LF+QM + + + ++F+++L AC+H+G +++GW +FN+M ++ P + HY+
Sbjct: 430 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 489
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ D+L R G L +A F+++MPI DA IWG LLC C+IH ++++ E VA ++FELEP
Sbjct: 490 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 549
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV MANIYA +W+ V LR + + ++K PG S + I G+ F D
Sbjct: 550 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 604
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 195/369 (52%), Gaps = 3/369 (0%)
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
FD++ WN ++ A+ G + LF M G++ D T ++++ + +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ +H F + G SV N+ ++ Y K + A VF + E R V+SWNSII
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE--RDVISWNSIIN 118
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + L+ + M+ G D+ T+VS+ + C + GR VHS G+ F
Sbjct: 119 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 178
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+ NTL+ MYSKCGD+DSA+ +F M DR+ VS+T+MI+GYA++G EA++LF ME
Sbjct: 179 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 238
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G PD+ TV ++++ C + L+ GK + L ++ V NAL+DMY+KCGS+
Sbjct: 239 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQAC 470
+A +F + K ++SW T+I G + N EAL LF+ ++E P+ T VL AC
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358
Query: 471 THAGFLEKG 479
+KG
Sbjct: 359 ASLSAFDKG 367
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 7/320 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ + S I + A +A+ LF M++ I P+ T + CA+ + +H
Sbjct: 210 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 269
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I ++ DIFV ++DMYAKC + A +F +M +D+ SWN +I G+++ +
Sbjct: 270 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 329
Query: 138 KVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF N+ L D TV + A + +H + + G +D V N+
Sbjct: 330 EALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 388
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC L +A ++F I + +VSW +I G +++ + M G
Sbjct: 389 LVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 446
Query: 256 PDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSAR 313
D + VSLL +C + +G R + + V ++ M ++ GD I + R
Sbjct: 447 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 506
Query: 314 FLFDGMCDRTRVSWTAMISG 333
F+ + W A++ G
Sbjct: 507 FIENMPIPPDATIWGALLCG 526
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 6/208 (2%)
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + + W +++ A+ GD ++ LF M ++G D T + ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ + G + V N+L+ Y K + AR++F + E+ V+SW ++I G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV------ 489
NG + L +F QM+ + + T ++V C + + G ++ K
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALD 517
N L+ YS DL K +E D
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSD 208
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 334/595 (56%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + E + ++ LF++M + +E ++ TF ++K+ + L + +HG I+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F V ++V Y K R+D A K+FD+M +RDV SWN++I G+ G EK L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M + GI+ D T++ + ++ +SL ++VHS G+ + CNT + Y+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL A+ VFR + + R+VVS+ S+I G +++ + M +G PDV TV
Sbjct: 343 KCGDLDSAKAVFREMSD--RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++L+ C L +G+ VH D+ V N L+ MY+KCG + A +F M
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SW +I GY++ +EAL LF +E PD TV ++ C A + G+
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y G + V N+L+DMY+KCG++ A LF + K +VSWT MIAG ++G
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA+ LF+QM + + + ++F+++L AC+H+G +++GW +FN+M ++ P + HY+
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ D+L R G L +A F+++MPI DA IWG LLC C+IH ++++ E VA ++FELEP
Sbjct: 641 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 700
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV MANIYA +W+ V LR + + ++K PG S + I G+ F D
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 232/463 (50%), Gaps = 5/463 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ N+Q+R + A+ L K DI+P T + + CA + +
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVD 117
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I + F D + + + MY C L A ++FD++ WN ++ A+ G
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF M G++ D T ++++ + + + +H F + G SV N+ +
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV 237
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y K + A VF + E R V+SWNSII G + L+ + M+ G D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ T+VS+ + C + GR VHS G+ F + NTL+ MYSKCGD+DSA+ +F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M DR+ VS+T+MI+GYA++G EA++LF ME G PD+ TV ++++ C + L+
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + L ++ V NAL+DMY+KCGS+ +A +F + K ++SW T+I G +
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 438 NGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKG 479
N EAL LF+ ++E P+ T VL AC +KG
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 198/422 (46%), Gaps = 12/422 (2%)
Query: 117 DRDVASWNAMIVGFAQMGFLE---KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
DR V N + F + G LE K+LC+ + D T+ + Q +K L
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI-----DPRTLCSVLQLCADSKSLKD 112
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
K V +F G D ++ + Y C DLK A VF ++ + + WN ++
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK--IEKALFWNILMNEL 170
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
F S+ ++ M+ G D T + S ++ G +H + GF
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
SV N+L++ Y K +DSAR +FD M +R +SW ++I+GY G ++ L +F M +
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS 290
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G DL T++S+ +GC S + LG+ + CN L+DMYSKCG + A
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+ +F + +++VVS+T+MIAG A G EA+ LF +M E + P+ T AVL C
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
L++G + K + ++ + + D+ + G ++EA M +K D W T
Sbjct: 411 RLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNT 468
Query: 534 LL 535
++
Sbjct: 469 II 470
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 7/320 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ + S I + A +A+ LF M++ I P+ T + CA+ + +H
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I ++ DIFV ++DMYAKC + A +F +M +D+ SWN +I G+++ +
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 138 KVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF N+ L D TV + A + +H + + G +D V N+
Sbjct: 481 EALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC L +A ++F I + +VSW +I G +++ + M G
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 256 PDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSAR 313
D + VSLL +C + +G R + + V ++ M ++ GD I + R
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657
Query: 314 FLFDGMCDRTRVSWTAMISG 333
F+ + W A++ G
Sbjct: 658 FIENMPIPPDATIWGALLCG 677
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/596 (35%), Positives = 328/596 (55%), Gaps = 6/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + + + A+ LFR M+ + EPN T CA +D L +H V
Sbjct: 210 WNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAV 269
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++ V T++ MYAKC LD A++LF+ +P D+ +WN MI G Q G L++ L
Sbjct: 270 KCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALG 329
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M G + D VT++ L A L K VH + I V D + + + Y
Sbjct: 330 LFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYF 389
Query: 202 KCNDLKMAELVFRGIEEGLRT--VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
KC D++ A R + + R VV +++I G + +L +R+++ +P+
Sbjct: 390 KCRDVRTA----RNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAV 445
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
TV S+L +C AL G+ +H + + ++ V + L+ MY+KCG +D + ++F M
Sbjct: 446 TVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKM 505
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ V+W +MIS ++Q G+ EAL LF M G + VT+ S +S C A+ GK
Sbjct: 506 SLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGK 565
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G +K ++ +ALIDMY+KCG++ A +F +P+K VSW ++I+ +G
Sbjct: 566 EIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHG 625
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
E++ H+M E +P+ VTFLA++ AC HAG +E+G F MTK Y + P + H+
Sbjct: 626 LVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHF 685
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DL R G+L +A+ F+ MP K DAGIWG LL AC++HRN+E+ + + LF+L+P
Sbjct: 686 ACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDP 745
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ YV M+NI A+ GRWDGV+ +R +MK N++ K PG S V +N + F D
Sbjct: 746 GNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASD 801
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 268/538 (49%), Gaps = 8/538 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDI--EPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN IR A+L + +M + P+ T P++ K+CA L +++H
Sbjct: 107 WNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRT 166
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+ SD++V + ++ MY+ L A FD MP RD WN M+ G+ + G +
Sbjct: 167 ARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGA 226
Query: 140 LCLFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ LF NMR+ G + +F T+ L+ A A LS ++ +HS + G++ +V+V NT +S
Sbjct: 227 VRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQ-LHSLAVKCGLEQEVAVANTLLS 285
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC L A +F + +V+WN +I GC D++L + M+ G RPD
Sbjct: 286 MYAKCRCLDDAWRLFELLPRD--DLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDS 343
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+VSLL + L QG+ VH + I +D +++ L+ +Y KC D+ +AR L+D
Sbjct: 344 VTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDA 403
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
V + +ISGY G ++AL++F + P+ VTV S++ C AL LG
Sbjct: 404 ARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLG 463
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ Y + V +AL+DMY+KCG + + +F + K V+W +MI+ + N
Sbjct: 464 QEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQN 523
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
GE EALDLF QM ++ N VT + L AC + G ++ K + ++
Sbjct: 524 GEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIK-GPIKADIFA 582
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
S + D+ + G ++ AL + MP K++ W +++ A H ++ +R+ E
Sbjct: 583 ESALIDMYAKCGNMELALRVFEFMPDKNEVS-WNSIISAYGAHGLVKESVSFLHRMQE 639
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 215/450 (47%), Gaps = 6/450 (1%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL ++ + WN I V +AL LF M ++ P+++T + A L+
Sbjct: 298 RLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLN 357
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ +HG+I+++ D F+ + +VD+Y KC + A L+D DV + +I
Sbjct: 358 GLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVIS 417
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+ G EK L +F + I+ + VTV + A L L + +H + + +
Sbjct: 418 GYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEG 477
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
V + + YAKC L ++ +F + L+ V+WNS+I + + ++L+ +R
Sbjct: 478 KCYVESALMDMYAKCGRLDLSHYIFSKMS--LKDEVTWNSMISSFSQNGEPQEALDLFRQ 535
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +G + + T+ S LS+C A+ G+ +H I D+ + LI MY+KCG+
Sbjct: 536 MCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGN 595
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
++ A +F+ M D+ VSW ++IS Y G + E++ M+ G PD VT L++IS
Sbjct: 596 MELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISA 655
Query: 369 CGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C +G +E G + F + + ++D+YS+ G + A + +P K
Sbjct: 656 CAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAG 715
Query: 428 -WTTMIAGCALNGEFVEALDLFHQ-MMELD 455
W ++ C ++ VE D+ Q + +LD
Sbjct: 716 IWGALLHACRVHRN-VELADIASQELFKLD 744
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 218/485 (44%), Gaps = 18/485 (3%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSD---IFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
+ C IH V S S+ + + T ++ MY R A +F +P
Sbjct: 40 RGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRA 99
Query: 119 DVAS---WNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSL 173
S WN +I GF G + + M D T+ + ++ +SL
Sbjct: 100 AAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSL 159
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ VH G+ +DV V + I Y+ L+ A F G+ R V WN ++ G
Sbjct: 160 GRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMP--WRDCVLWNVMMDGY 217
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
++ +R+M G P+ T+ LS C L+ G +HS + G + +V
Sbjct: 218 IKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEV 277
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+V NTL+SMY+KC +D A LF+ + V+W MISG Q G LDEAL LF M +
Sbjct: 278 AVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRS 337
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD VT++S++ L+ GK Y + + + +AL+D+Y KC + A
Sbjct: 338 GARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTA 397
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
R L+ A VV +T+I+G LNG +AL +F ++E ++PN VT +VL AC
Sbjct: 398 RNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASI 457
Query: 474 GFLEKGW---GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
L G GY ++ Y+ + S + D+ + G+L + M +K D
Sbjct: 458 SALPLGQEIHGY--VLRNAYEGKCYVE--SALMDMYAKCGRLDLSHYIFSKMSLK-DEVT 512
Query: 531 WGTLL 535
W +++
Sbjct: 513 WNSMI 517
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 330/594 (55%), Gaps = 7/594 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR +++ L+ M + + P N TFPF+ KAC+ L ++IH H
Sbjct: 75 WNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAH 134
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP--DRDVASWNAMIVGFAQMGFLEKV 139
D++V T ++ MYAKC L A LF+ + DRD+ +WNAMI F+ +
Sbjct: 135 ILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQT 194
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ M+ G+ + T++ + A L K++H++ I +V + +
Sbjct: 195 IHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDM 254
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM--IYDGFRPD 257
YAKC+ L A +F + + + V W+++IGG D D+L Y M IY G P
Sbjct: 255 YAKCHLLFYARKIFNTVNK--KNDVCWSAMIGGYVLHDSISDALALYDDMLCIY-GLNPT 311
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ ++L +C L +G+ +H H I G DLD +V N+LISMY+KCG +D+A D
Sbjct: 312 PATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLD 371
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M + VS++A+ISG Q G ++AL +F M+++G P L T+++++ C AL+
Sbjct: 372 EMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQH 431
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G Y G ++ +CNA+IDMYSKCG I +RE+F + + ++SW TMI G +
Sbjct: 432 GTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGI 491
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G VEAL LF ++ L L+P+ VT +AVL AC+H+G + +G +F+ M++ + + P +
Sbjct: 492 HGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMA 551
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY CM DLL R G L EA F+Q MP + IWG LL AC+ H+NIE+GE V+ ++ L
Sbjct: 552 HYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLL 611
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
P +V M+NIY+ GRWD A +R++ + + KK PG S V I+G F
Sbjct: 612 GPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVF 665
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 221/456 (48%), Gaps = 15/456 (3%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
T + + + + A +FD++P V WN MI +A G ++ + L+ +M +G+
Sbjct: 45 TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT 104
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
T L +A + L L + +H+ +G+ D+ V + YAKC L A+ +
Sbjct: 105 PTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTL 164
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F I R +V+WN++I ++ +++ M G P+ +T+VS+L +
Sbjct: 165 FNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQAN 224
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL QG+ +H++ I F +V + L+ MY+KC + AR +F+ + + V W+AMI
Sbjct: 225 ALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIG 284
Query: 333 GYAQKGDLDEALRLFFAMEAA-GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
GY + +AL L+ M G P T+ +M+ C Q L+ GK + G+
Sbjct: 285 GYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMD 344
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ V N+LI MY+KCG + +A + K VS++ +I+GC NG +AL +F QM
Sbjct: 345 LDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQM 404
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKG---WGYFNLMTKVYQVNPELNHYSCMADLLGR 508
+ P T +A+L AC+H L+ G GY T V + + + + D+ +
Sbjct: 405 QSSGIAPYLETMIALLPACSHLAALQHGTCCHGY----TVVRGFTNDTSICNAIIDMYSK 460
Query: 509 KGKL---KEALDFVQSMPIKSDAGIWGTLLCACKIH 541
GK+ +E D +Q+ I S W T++ IH
Sbjct: 461 CGKITISREIFDRMQNRDIIS----WNTMIIGYGIH 492
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/565 (38%), Positives = 321/565 (56%), Gaps = 3/565 (0%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P+ T + CA+ D IHG VK D+ V ++VDMY+KC L A L
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQML 191
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKH 170
FDK ++ SWN MI G G++ + LF M++ I+ + VTV+ + A +
Sbjct: 192 FDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQ 251
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L LK +H + I G D V N +++AYAKC L AE VF +E +TV SWN++I
Sbjct: 252 LRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMET--KTVNSWNALI 309
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
GGC +LN Y M Y G PD T+ SLL + ++L G+ VH + +G +
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLE 369
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+D + +L+S+Y CG+ SAR LFDGM +++ VSW AMISGY+Q G ++AL LF +
Sbjct: 370 IDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKL 429
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G P + V+S++ C Q AL LGK YA L ++V V + IDMY+K G I
Sbjct: 430 VSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCI 489
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
++R +F L K + SW +IA ++G+ E+++LF +M ++ P+ TF+ +L C
Sbjct: 490 KESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVC 549
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+HAG +E+G YFN M + + P+L HY+C+ D+LGR G+L +AL V MP + D+ +
Sbjct: 550 SHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRV 609
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
W +LL C+ +EIG+ VA +L ELEP + YV ++N+YA GRWD V +R M+K
Sbjct: 610 WSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKD 669
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
++K G S + + GK +F D
Sbjct: 670 IGLQKDAGCSWIELGGKVHSFVAGD 694
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 263/527 (49%), Gaps = 19/527 (3%)
Query: 29 AVDKNEAHK-ALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFW 86
AV +NE + A+ +F ++ + +N TFP + KAC D ++IHG ++K
Sbjct: 4 AVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLL 63
Query: 87 SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM 146
D+FV ++ MY K +D A K+F MP R++ SWN++I GF++ GF + + M
Sbjct: 64 LDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEM 123
Query: 147 RL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
G+ D T++ + + + +H + +G+ DV V N+ + Y+KC
Sbjct: 124 MAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCG 183
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHM-IYDGFRPDVTTVV 262
L A+++F + + VSWN++IGG CT G F ++ N +R M + + + TV+
Sbjct: 184 YLTEAQMLFD--KNNRKNAVSWNTMIGGLCTKGYIF-EAFNLFREMQMQEDIEVNEVTVL 240
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
++L +C+ L + +H + I +GF D V N ++ Y+KCG + A +F M +
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK 300
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
T SW A+I G AQ GD +AL L+ M +G VPD T+ S++ +L GK
Sbjct: 301 TVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVH 360
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+ GL+ + + +L+ +Y CG AR LF + EK+ VSW MI+G + NG
Sbjct: 361 GFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPE 420
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
+AL LF +++ +P+ + ++VL AC+ L G T Y + L +
Sbjct: 421 DALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLG-----KETHCYALKALLMEDVFV 475
Query: 503 A----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
A D+ + G +KE+ + K D W ++ A +H + E
Sbjct: 476 ACSTIDMYAKSGCIKESRSVFDGLKNK-DLASWNAIIAAYGVHGDGE 521
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 229/437 (52%), Gaps = 5/437 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I K +A LFR M+ + DIE N +T I AC ++S + +HG+
Sbjct: 203 WNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYS 262
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++ F D V V YAKC L CA ++F M + V SWNA+I G AQ G K L
Sbjct: 263 IRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKAL 322
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L+ M G+ D+ T+ L A+ H K L K VH F + G++ D + + +S Y
Sbjct: 323 NLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLY 382
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
C + A L+F G+EE ++ VSWN++I G + +D+L +R ++ DGF+P
Sbjct: 383 IHCGESSSARLLFDGMEE--KSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIA 440
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VVS+L +C AL G+ H + + DV V + I MY+K G I +R +FDG+
Sbjct: 441 VVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK 500
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
++ SW A+I+ Y GD +E++ LF M G++PD T + +++ C +G +E G K
Sbjct: 501 NKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLK 560
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
+F+ G++ + ++DM + G + DA L + +PE+ W+++++ C
Sbjct: 561 YFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNF 620
Query: 439 GEFVEALDLFHQMMELD 455
GE + +++EL+
Sbjct: 621 GELEIGQIVAEKLLELE 637
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 155/370 (41%), Gaps = 45/370 (12%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ T+N WN+ I + KAL L+ +M + + P+ T + A A L Y +
Sbjct: 298 ETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGK 357
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG +++ D F+ +++ +Y C A LFD M ++ SWNAMI G++Q G
Sbjct: 358 EVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNG 417
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E L LF + G Q + V+ + A L L K H + + + DV V
Sbjct: 418 LPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVAC 477
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I YAK +K + VF G++ + + SWN+II ++S+ + M G
Sbjct: 478 STIDMYAKSGCIKESRSVFDGLKN--KDLASWNAIIAAYGVHGDGEESIELFERMRKVGQ 535
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
PD T + +L+ C + +G + + HGI + V++ L
Sbjct: 536 MPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDML---------- 585
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ G LD+ALRL M E PD S++S C
Sbjct: 586 -------------------------GRAGRLDDALRLVHEMP---EQPDSRVWSSLLSFC 617
Query: 370 GQSGALELGK 379
G LE+G+
Sbjct: 618 RNFGELEIGQ 627
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/602 (36%), Positives = 337/602 (55%), Gaps = 6/602 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMI 76
++ WNS +R + + + L LF M E P+N T P KACA L ++I
Sbjct: 66 NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125
Query: 77 HGHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
HG K+ SD+FV + +V++Y+KC ++ A K+F++ D W +M+ G+ Q
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185
Query: 136 LEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E+ L LF M ++ + D VT++ + A ++ VH I D D+ + N
Sbjct: 186 PEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN 245
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ ++ YAK K+A +F + E + V+SW+++I + +++LN + MI F
Sbjct: 246 SLLNLYAKTGCEKIAANLFSKMPE--KDVISWSTMIACYANNEAANEALNLFHEMIEKRF 303
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P+ TVVS L +C L +G+ +H + GF+LD SV LI MY KC D A
Sbjct: 304 EPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVD 363
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LF + + VSW A++SGYAQ G +++ +F M + G PD V V+ +++ + G
Sbjct: 364 LFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI 423
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ Y G NV V +LI++YSKCGS+GDA +LF + + VV W++MIA
Sbjct: 424 FQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAA 483
Query: 435 CALNGEFVEALDLFHQMME-LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
++G EAL++F QM++ +RPN VTFL++L AC+HAG +E+G F+ M YQ+
Sbjct: 484 YGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLR 543
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P+ H+ M DLLGR G+L +A+D + MPI + +WG LL AC+IH NIE+GE A
Sbjct: 544 PDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKN 603
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LF L+P A Y+ ++NIYA+ G+WD VA LRT +K +KK GQS+V + G +F
Sbjct: 604 LFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLA 663
Query: 614 ED 615
D
Sbjct: 664 SD 665
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/445 (40%), Positives = 260/445 (58%), Gaps = 2/445 (0%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
S LK H+ G+ D + + Y N + A +VF I + WN +I
Sbjct: 733 FSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFL--WNVMI 790
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G +F SL Y M+ G +PD L SC L +G+++H H + G
Sbjct: 791 RGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCS 850
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+ V L+ MY+KCGDI++AR +FD M R VSWT+MISGYA G E L F M
Sbjct: 851 NDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLM 910
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
++G +P+ V++LS++ CG GAL G+WF +Y G + +++V A++DMYSKCGS+
Sbjct: 911 RSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSL 970
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
AR LF K +V W+ MIA ++G +A+DLF QM++ +RP+ VTF VL AC
Sbjct: 971 DLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC 1030
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+H+G LE+G YF LMT+ + + +L++Y+CM DLLGR G+L EA+D +++MP++ DA I
Sbjct: 1031 SHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASI 1090
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
WG+LL AC+IH N+++ E +A LF L+P A +V ++NIYA RW+ V +R MM R
Sbjct: 1091 WGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMAR 1150
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
K G SLV + + F V D
Sbjct: 1151 RGANKIQGFSLVEYDNQVHKFGVGD 1175
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 232/470 (49%), Gaps = 9/470 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H + K+ D F T + +YAKC L A K+FD+ P +V WN+ + + +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 136 LEKVLCLFYNMRLVGIQA-DFVTVMGLTQAAIHAKHLSLLKSVHSFG-IHIGVDADVSVC 193
E+ L LF+ M +A D T+ +A + L L K +H F + + +D+ V
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMI-Y 251
+ + Y+KC + A VF EE R V W S++ G + +++L + M+
Sbjct: 143 SALVELYSKCGQMGEALKVF---EEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
D D T+VS++S+C + G VH I FD D+ ++N+L+++Y+K G
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A LF M ++ +SW+ MI+ YA +EAL LF M P+ VTV+S + C
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
S LE GK A G + + V ALIDMY KC +A +LF LP+K VVSW +
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
++G A NG +++ +F M+ ++P+ V + +L A + G ++ + +
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVR-SG 438
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
N + + + +L + G L +A+ + M ++ D IW +++ A IH
Sbjct: 439 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIH 487
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 194/452 (42%), Gaps = 51/452 (11%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I D + T MY +R+D A +F+ +P+ WN MI GFA G
Sbjct: 740 HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
L L+ M G++ D ++ L K +H + G D+ V
Sbjct: 800 LSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAAL 859
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC D++ A LVF + +R +VSW S+I G + ++L F+ M G P
Sbjct: 860 VDMYAKCGDIEAARLVFDKM--AVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ +++S+L +C AL +G HS+ I GF+ D+ V ++ MYSKCG +D AR LF
Sbjct: 918 NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + V W+AMI+ Y G +A+ LF M AG P VT ++S C SG LE
Sbjct: 978 DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037
Query: 377 LGKWF--------------DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP- 421
GK + NYAC ++D+ + G + +A +L +P
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYAC-------------MVDLLGRAGQLSEAVDLIENMPV 1084
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
E W +++ C ++ A + + LD HA G
Sbjct: 1085 EPDASIWGSLLGACRIHNNLDLAEKIADHLFHLD--------------PVHA-------G 1123
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
Y L++ +Y N + ++ R+G K
Sbjct: 1124 YHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 1155
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 186/383 (48%), Gaps = 12/383 (3%)
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
++ L QA + + +S L HS G+ D S YAKC L+ A VF
Sbjct: 6 VLVDLFQACNNGRSVSQL---HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD-- 60
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALV 275
E V WNS + +++++L + MI G PD T+ L +C L
Sbjct: 61 ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120
Query: 276 QGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G+++H D+ V + L+ +YSKCG + A +F+ V WT+M++GY
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY 180
Query: 335 AQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
Q D +EAL LF M V D VT++S++S C Q ++ G +
Sbjct: 181 QQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGD 240
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ + N+L+++Y+K G A LF +PEK V+SW+TMIA A N EAL+LFH+M+E
Sbjct: 241 LPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIE 300
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT-KVYQVNPELNHYSCMADLLGRKGKL 512
PN VT ++ LQAC + LE+G + K ++++ ++ + + D+ +
Sbjct: 301 KRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVS--TALIDMYMKCSCP 358
Query: 513 KEALDFVQSMPIKSDAGIWGTLL 535
EA+D Q +P K D W LL
Sbjct: 359 DEAVDLFQRLP-KKDVVSWVALL 380
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 131/258 (50%), Gaps = 2/258 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR +L L+ +M + ++P+ FPF K+CA LSD ++IH H+V
Sbjct: 786 WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV 845
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+D+FV +VDMYAKC ++ A +FDKM RD+ SW +MI G+A G+ + L
Sbjct: 846 CCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLG 905
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F MR G+ + V+++ + A + L + HS+ I G + D+ V + Y+
Sbjct: 906 FFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYS 965
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L +A +F E + +V W+++I +++ + M+ G RP T
Sbjct: 966 KCGSLDLARCLFD--ETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTF 1023
Query: 262 VSLLSSCVCPEALVQGRL 279
+LS+C L +G++
Sbjct: 1024 TCVLSACSHSGLLEEGKM 1041
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 326/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V + A+ LFR M+ + +PN T CA +D L +H V
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAV 275
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++ V T+V MYAKC L+ A++LF MP D+ +WN MI G Q G ++ L
Sbjct: 276 KYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M+ G+Q D VT+ L A K +H + + DV + + + Y
Sbjct: 336 LFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYF 395
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++MA+ VF + VV +++I G + ++ +R+++ G +P+ V
Sbjct: 396 KCRDVRMAQNVFDATKS--IDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMV 453
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L +C A+ G+ +H + + ++ V + L+ MYSKCG +D + ++F M
Sbjct: 454 ASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSA 513
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W +MIS +AQ G+ +EAL LF M G + VT+ S++S C A+ GK
Sbjct: 514 KDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEI 573
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G ++ ++ +ALIDMY KCG++ A +F +PEK VSW ++I+ +G
Sbjct: 574 HGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLV 633
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E++DL M E + + VTFLA++ AC HAG +++G F MT+ Y + P++ H SC
Sbjct: 634 KESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSC 693
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL R GKL +A+ F+ MP K DAGIWG LL AC++HRN+E+ E + LF+L+PH+
Sbjct: 694 MVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHN 753
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV M+NI A+ GRWDGV+ +R +MK +V+K PG S V +N + F D
Sbjct: 754 CGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAAD 807
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 259/523 (49%), Gaps = 8/523 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN IR A+L + +M + P+ T P++ K+CA L +++H
Sbjct: 113 WNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRT 172
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
D++V + ++ MYA LD A ++FD M +RD WN M+ G+ + G +
Sbjct: 173 TRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASA 232
Query: 140 LCLFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ LF MR G +F T+ L+ A A LS ++ +H+ + G++ +V+V NT +S
Sbjct: 233 VGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQ-LHTLAVKYGLEPEVAVANTLVS 291
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC L+ A +F + +V+WN +I GC DD+L + M G +PD
Sbjct: 292 MYAKCQCLEEAWRLFGLMPRD--DLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDS 349
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ SLL + QG+ +H + + +DV +++ L+ +Y KC D+ A+ +FD
Sbjct: 350 VTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDA 409
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
V + MISGY + A+++F + A G P+ V V S + C A+ +G
Sbjct: 410 TKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIG 469
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ Y + V +AL+DMYSKCG + + +F + K V+W +MI+ A N
Sbjct: 470 QELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQN 529
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
GE EALDLF QM+ ++ N VT ++L AC + G ++ K + +L
Sbjct: 530 GEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIK-GPIRADLFA 588
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
S + D+ G+ G L+ AL + MP K++ W +++ A H
Sbjct: 589 ESALIDMYGKCGNLELALRVFEHMPEKNEVS-WNSIISAYGAH 630
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 190/400 (47%), Gaps = 19/400 (4%)
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA---SWNAMIVGFAQMGFLEKVLCLFY--- 144
+QT +V MY R A +F +P A WN +I GF G ++ LFY
Sbjct: 78 LQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGH-HRLAVLFYVKM 136
Query: 145 -----NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ R G +V + AA+ A HL L VH +G+D D+ V + I
Sbjct: 137 WAHPSSPRPDGHTLPYVVK---SCAALGALHLGRL--VHRTTRALGLDRDMYVGSALIKM 191
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YA L A VF G++E R V WN ++ G ++ +R M G P+
Sbjct: 192 YADAGLLDGAREVFDGMDE--RDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFA 249
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ LS C L+ G +H+ + YG + +V+V NTL+SMY+KC ++ A LF M
Sbjct: 250 TLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLM 309
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
V+W MISG Q G +D+ALRLF M+ +G PD VT+ S++ + + GK
Sbjct: 310 PRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGK 369
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
Y +V + +AL+D+Y KC + A+ +F A VV +TMI+G LN
Sbjct: 370 EIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNR 429
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A+ +F ++ L ++PN V + L AC + G
Sbjct: 430 MSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIG 469
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 154/330 (46%), Gaps = 8/330 (2%)
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGV-----DADVSVCNTWISAYAKCNDLKMAELV 212
++ L + + HL L +H+ + G+ ++ + Y + A V
Sbjct: 39 LLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAV 98
Query: 213 FRGIEEGLRTV-VSWNSIIGGCTYGDKFDDSLNFYRHMIY--DGFRPDVTTVVSLLSSCV 269
F + + WN +I G T ++ FY M RPD T+ ++ SC
Sbjct: 99 FSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCA 158
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
AL GRLVH G D D+ V + LI MY+ G +D AR +FDGM +R V W
Sbjct: 159 ALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNV 218
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
M+ GY + GD+ A+ LF M A+G P+ T+ +S C L G A G
Sbjct: 219 MMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYG 278
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L+ V V N L+ MY+KC + +A LF +P +V+W MI+GC NG +AL LF
Sbjct: 279 LEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFC 338
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
M + L+P+ VT ++L A T ++G
Sbjct: 339 DMQKSGLQPDSVTLASLLPALTELNGFKQG 368
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 119/294 (40%), Gaps = 14/294 (4%)
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD------VSVINTLISMYSKCGDI 309
P +++LL CV P L G +H+ + G LD ++ L+ MY
Sbjct: 34 PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGL-LDAAGPGPAALQTRLVGMYVLARRF 92
Query: 310 DSARFLFDGM---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA--AGEVPDLVTVLS 364
A +F + + W +I G+ G A+ + M A + PD T+
Sbjct: 93 RDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPY 152
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++ C GAL LG+ + GL ++ V +ALI MY+ G + ARE+F + E+
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
V W M+ G G+ A+ LF M PN T L C L G
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHT 272
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
L K Y + PE+ + + + + L+EA MP + D W ++ C
Sbjct: 273 LAVK-YGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMP-RDDLVTWNGMISGC 324
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/601 (35%), Positives = 335/601 (55%), Gaps = 11/601 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ IR + H A+ L+R M + PN TFPF+ KAC+ L+D + IH H
Sbjct: 67 YNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAA 126
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+D+FV T ++D+Y +C R A +F KMP RDV +WNAM+ G+A G +
Sbjct: 127 AVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 186
Query: 142 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLK--SVHSFGIHIGVDAD---VSVCNT 195
+M+ G++ + T++ L + A+H +L + SVH++ + +D + V +
Sbjct: 187 HLLDMQDRGGLRPNASTLVSLL--PLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTA 244
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF- 254
+ YAKC L A VF G+ +R V+W+++IGG D+ ++ N ++ M+ +G
Sbjct: 245 LLDMYAKCKHLVYACRVFHGMT--VRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMC 302
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
T+V S L C L G +H+ G D++ N+L+SMY+K G I+ A
Sbjct: 303 FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATM 362
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LFD + + +S+ A++SGY Q G +EA +F M+A PD+ T++S+I C A
Sbjct: 363 LFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAA 422
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+ G+ GL +CN+LIDMY+KCG I +R++F +P + +VSW TMIAG
Sbjct: 423 LQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG 482
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
++G EA LF M P+ VTF+ ++ AC+H+G + +G +F+ MT Y + P
Sbjct: 483 YGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILP 542
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HY CM DLL R G L EA F+QSMP+K+D +WG LL AC+IH+NI++G+ V+ +
Sbjct: 543 RMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMI 602
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
+L P +V ++NI++ GR+D A +R + K KK PG S + ING F
Sbjct: 603 QKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGG 662
Query: 615 D 615
D
Sbjct: 663 D 663
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 205/443 (46%), Gaps = 9/443 (2%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+L A ++FD++P D ++NA+I ++ G + L+ +M + + T + +
Sbjct: 48 QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLK 107
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A L +++H+ +G+ D+ V I Y +C A VF + +R V
Sbjct: 108 ACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP--MRDV 165
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+WN+++ G + ++ M G RP+ +T+VSLL AL QG VH+
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 283 HGIHYGFDLD---VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
+ + D + V + L+ MY+KC + A +F GM R V+W+A+I G+
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285
Query: 340 LDEALRLFFAMEAAGE-VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ EA LF M G +V S + C L +G G+ ++ N
Sbjct: 286 MTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+L+ MY+K G I +A LF + K +S+ +++G NG+ EA +F +M +++P
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQP 405
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ T ++++ AC+H L+ G + + + E + + + D+ + G++ +
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVI-IRGLALETSICNSLIDMYAKCGRIDLSRQV 464
Query: 519 VQSMPIKSDAGIWGTLLCACKIH 541
MP + D W T++ IH
Sbjct: 465 FDKMPAR-DIVSWNTMIAGYGIH 486
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 7/237 (2%)
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + AR +FD + ++ A+I Y+ +G A+ L+ +M P+ T ++
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C L G+ +A + GL ++ V ALID+Y +C G A +F +P + VV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
+W M+AG A +G + A+ M + LRPN T +++L G L +G
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 486 MTKVY--QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD----AGIWGTLLC 536
+ Y Q ++ + + D+ + L A M ++++ A I G +LC
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLC 283
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/577 (36%), Positives = 325/577 (56%), Gaps = 3/577 (0%)
Query: 39 LLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDM 98
++L R+++ I ++ + + K C K D + ++ +H I+KS + V ++ +
Sbjct: 14 VVLMNRLQRGLI-TDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHV 72
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
Y +C RL A +FD + + ASWNAMI G+ + E + LF M G+Q + T
Sbjct: 73 YIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTY 132
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
M + +A L K VH+ H G+++DV V + Y KC + A +F +
Sbjct: 133 MIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMN 192
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
++SW +IG ++ M +GF+P+ T VS+L++C AL +
Sbjct: 193 --HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH H + G +LDV V L+ MY+K G ID AR +FD M R VSW MI +A+ G
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHG 310
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
EA LF M+ G PD + LS+++ C +GALE K +A GL+ +V V
Sbjct: 311 RGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGT 370
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+ MYSK GSI DAR +F + + VVSW MI+G A +G +AL++F +M ++P
Sbjct: 371 ALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKP 430
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+RVTF+AVL AC+HAG +++G + MT+VY + P+++H +CM DLLGR G+L EA F
Sbjct: 431 DRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLF 490
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+ +M + D WG LL +C+ + N+E+GE VA +L+P +AA YV ++NIYA G+W
Sbjct: 491 IDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKW 550
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
D V+ +RTMM+ ++K PG+S + ++ K F V D
Sbjct: 551 DMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVAD 587
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 228/455 (50%), Gaps = 5/455 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V+ A A+ LFR M ++PN T+ I KACA LS + + +H I
Sbjct: 97 WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIR 156
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
SD+ V T ++ MY KC ++ A ++FD + + D+ SW MI +AQ G ++
Sbjct: 157 HGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYR 216
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G + + +T + + A L +K VH + G++ DV V + YA
Sbjct: 217 LMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYA 276
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + A +VF ++ +R VVSWN +IG + ++ + + M +G +PD
Sbjct: 277 KSGSIDDARVVFDRMK--VRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMF 334
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S+L++C AL + +H H + G ++DV V L+ MYSK G ID AR +FD M
Sbjct: 335 LSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV 394
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-W 380
R VSW AMISG AQ G +AL +F M A G PD VT ++++S C +G ++ G+
Sbjct: 395 RNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQ 454
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
+ G++ +V CN ++D+ + G + +A+ + + +W ++ C G
Sbjct: 455 YLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYG 514
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+ + ++LD + N T++ + AG
Sbjct: 515 NVELGELVAKERLKLDPK-NAATYVLLSNIYAEAG 548
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 4/325 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W I +A L +M++ +PN +T+ I ACA + + +H
Sbjct: 195 IISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHR 254
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
H + + D+ V T +V MYAK +D A +FD+M RDV SWN MI FA+ G +
Sbjct: 255 HALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHE 314
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
LF M+ G + D + + + A A L +K +H + G++ DV V +
Sbjct: 315 AYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVH 374
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K + A +VF ++ +R VVSWN++I G D+L +R M G +PD
Sbjct: 375 MYSKSGSIDDARVVFDRMK--VRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDR 432
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T V++LS+C + +GR + YG + DVS N ++ + + G + A+ D
Sbjct: 433 VTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFID 492
Query: 318 GMC-DRTRVSWTAMISGYAQKGDLD 341
M D +W A++ G+++
Sbjct: 493 NMAVDPDEATWGALLGSCRTYGNVE 517
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 317/561 (56%), Gaps = 5/561 (0%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F + + CA+L + +H I+KS + +++ T++ MYAKC L A ++FD +
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 117 DRDVASWNAMIVGF-AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
DR++ SW AMI F A LE C + M+L G + D VT + L A + + L L +
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKC-YETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
VH + G++ + V + + YAKC D+ A ++F + E + VV+W +I G
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPE--KNVVTWTLLIAGYAQ 226
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+ D +L M P+ T S+L C P AL G+ VH + I G+ ++ V
Sbjct: 227 QGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWV 286
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
+N+LI+MY KCG ++ AR LF + R V+WTAM++GYAQ G DEA+ LF M+ G
Sbjct: 287 VNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGI 346
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
PD +T S+++ C L+ GK G +V + +AL+ MY+KCGS+ DA
Sbjct: 347 KPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASL 406
Query: 416 LFYALPEKTVVSWTTMIAGC-ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F + E+ VV+WT +I GC A +G EAL+ F QM + ++P++VTF +VL ACTH G
Sbjct: 407 VFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVG 466
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+E+G +F M Y + P + HYSC DLLGR G L+EA + + SMP +WG L
Sbjct: 467 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGAL 526
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L AC++H ++E GE A + +L+P YV +++IYA GR++ +R +M++ V
Sbjct: 527 LSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVV 586
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K PGQS + ++GK F VED
Sbjct: 587 KEPGQSWIEVDGKVHVFHVED 607
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 223/441 (50%), Gaps = 36/441 (8%)
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ G L++ L + M L G + GL Q + L + VH+ + G+ +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ NT +S YAKC L A VF I + R +VSW ++I G+K ++ Y M
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRD--RNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G +PD T VSLL++ PE L G+ VH + G +L+ V +L+ MY+KCGDI
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISK 201
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR +FD + ++ V+WT +I+GYAQ+G +D AL L M+ A P+ +T S++ GC
Sbjct: 202 ARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTT 261
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
ALE GK Y G + V N+LI MY KCG + +AR+LF LP + VV+WT M
Sbjct: 262 PAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAM 321
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG------------ 479
+ G A G EA++LF +M + ++P+++TF +VL +C+ FL++G
Sbjct: 322 VTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGY 381
Query: 480 ----------------WGYFNLMTKVYQVNPELNHYSCMADLLG---RKGKLKEALDFVQ 520
G + + V+ E N + A + G + G+ +EAL++
Sbjct: 382 NLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFD 441
Query: 521 SMP---IKSDAGIWGTLLCAC 538
M IK D + ++L AC
Sbjct: 442 QMKKQGIKPDKVTFTSVLSAC 462
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 224/444 (50%), Gaps = 5/444 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R I W + I V N+ +A + MK +P+ +TF + A Q
Sbjct: 109 RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H IV++ + V T++V MYAKC + A +FD++P+++V +W +I G+AQ G
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ L L M+ + + +T + Q L K VH + I G ++ V N
Sbjct: 229 QVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVN 288
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I+ Y KC L+ A +F + R VV+W +++ G D+++N +R M G
Sbjct: 289 SLITMYCKCGGLEEARKLFSDLPH--RDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGI 346
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD T S+L+SC P L +G+ +H +H G++LDV + + L+SMY+KCG +D A
Sbjct: 347 KPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASL 406
Query: 315 LFDGMCDRTRVSWTAMISG-YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F+ M +R V+WTA+I+G AQ G EAL F M+ G PD VT S++S C G
Sbjct: 407 VFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVG 466
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTM 431
+E G K F + G+K V + +D+ + G + +A + ++P S W +
Sbjct: 467 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGAL 526
Query: 432 IAGCALNGEFVEALDLFHQMMELD 455
++ C ++ + +++LD
Sbjct: 527 LSACRVHSDVERGERAAENVLKLD 550
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/601 (36%), Positives = 341/601 (56%), Gaps = 8/601 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I+ WN + +AL LF ++ ++P++ T+P + KAC L ++ +MIH
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIH 129
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++K+ DI V +++V MY KC+ + A LF++MP++DVA WN +I + Q G +
Sbjct: 130 TCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L F MR G + + VT+ + L+ +H I+ G D + + +
Sbjct: 190 DALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALV 249
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD--DSLNFYRHMIYDGFR 255
Y KC L+MA +F + + +TVV+WNS+I G YG K D + ++ M +G +
Sbjct: 250 DMYGKCGHLEMAIEIFEQMPK--KTVVAWNSMISG--YGLKGDIISCIQLFKRMYNEGVK 305
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P +TT+ SL+ C L++G+ VH + I DV V ++L+ +Y KCG ++ A +
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKI 365
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + VSW MISGY +G L EAL LF M + D +T S+++ C Q AL
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAAL 425
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E GK N L +N +V AL+DMY+KCG++ +A +F LP++ +VSWT+MI
Sbjct: 426 EKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+G AL+LF +M++ +++P+RV FLA+L AC HAG +++G YFN M VY + P
Sbjct: 486 GSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPR 545
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HYSC+ DLLGR G+L EA + +Q P I+ D + TL AC++HRNI++G +A L
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
+ +P ++ Y+ ++N+YA +WD V +R+ MK +KK PG S + IN K F VE
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVE 665
Query: 615 D 615
D
Sbjct: 666 D 666
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 244/484 (50%), Gaps = 6/484 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR- 118
+ +AC ++IH +V +DIF+ T+++ Y C D A +FD M +
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
+++ WN ++ G+ + + L LF + ++ D T + +A L K +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H+ I G+ D+ V ++ + Y KCN + A +F + E + V WN++I
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPE--KDVACWNTVISCYYQSG 186
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
F D+L ++ M GF P+ T+ + +SSC L +G +H I+ GF LD + +
Sbjct: 187 NFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MY KCG ++ A +F+ M +T V+W +MISGY KGD+ ++LF M G P
Sbjct: 247 ALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKP 306
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
L T+ S+I C +S L GK+ Y ++ +V V ++L+D+Y KCG + A ++F
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIF 366
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+P+ VVSW MI+G G+ EAL LF +M + + + +TF +VL AC+ LE
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALE 426
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
KG NL+ + N E+ + D+ + G + EA + +P K D W +++ A
Sbjct: 427 KGKEIHNLIIEKKLDNNEVV-MGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMITA 484
Query: 538 CKIH 541
H
Sbjct: 485 YGSH 488
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 202/405 (49%), Gaps = 16/405 (3%)
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D ++ L +A +++K L K +H + +G+ D+ +C T I+ Y C+ A+ VF
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPE 272
+E + WN ++ G T + ++L + ++ Y +PD T S+ +C
Sbjct: 62 DNMENPCEISL-WNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
V G+++H+ I G +D+ V ++L+ MY KC + A +LF+ M ++ W +IS
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y Q G+ +AL F M G P+ VT+ + IS C + L G + G
Sbjct: 181 CYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+ + +AL+DMY KCG + A E+F +P+KTVV+W +MI+G L G+ + + LF +M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMY 300
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
++P T +++ C+ + L +G + + T ++ P++ S + DL + GK+
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEG-KFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV 359
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY-RLFE 556
+ A + +P KS W N+ I YVA +LFE
Sbjct: 360 ELAEKIFKLIP-KSKVVSW-----------NVMISGYVAEGKLFE 392
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 143/301 (47%), Gaps = 13/301 (4%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS I K + + LF+RM ++P T + C++ + L + +H
Sbjct: 272 TVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVH 331
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ +++ D+FV ++++D+Y KC +++ A K+F +P V SWN MI G+ G L
Sbjct: 332 GYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLF 391
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF MR +++D +T + A L K +H+ I +D + V +
Sbjct: 392 EALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALL 451
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG-----GCTYGDKFDDSLNFYRHMIYD 252
YAKC + A VF+ + + R +VSW S+I G YG +L + M+
Sbjct: 452 DMYAKCGAVDEAFSVFKCLPK--RDLVSWTSMITAYGSHGHAYG-----ALELFAEMLQS 504
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDS 311
+PD +++LS+C + +G + I+ YG V + LI + + G +
Sbjct: 505 NVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHE 564
Query: 312 A 312
A
Sbjct: 565 A 565
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L ++ K+ S + WN I V + + +AL LF M+K+ +E + +TF + AC+
Sbjct: 361 LAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACS 420
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+L+ + IH I++ ++ V ++DMYAKC +D A+ +F +P RD+ SW +
Sbjct: 421 QLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTS 480
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
MI + G L LF M ++ D V + + A HA
Sbjct: 481 MITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHA 523
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 324/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS I + + AL LF +MK++ ++P+ +T + ACA + +H +++
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI 341
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ SD+ V+ ++D+Y C + A+++F +V WN M+V F ++ L +
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFR 401
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M++ G+ + T + + L L + +H+ I G +V VC+ I YA
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A ++ R + E VVSW ++I G + F ++L ++ M+ G + D
Sbjct: 462 KHGKLDTAHVILRTLTED--DVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +S+C +AL QGR +H+ G+ D+S+ N L+S+Y++CG I A F+ +
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SW +ISG+AQ G ++AL++F M A T S +S ++ GK
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQI 639
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G ++ V NALI Y+KCGSI DAR F +PEK VSW MI G + +G
Sbjct: 640 HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYG 699
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA++LF +M ++ PN VTF+ VL AC+H G + KG GYF M+K + + P+ HY+C
Sbjct: 700 NEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYAC 759
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DL+ R G L A F++ MPI+ DA IW TLL AC +H+N+E+GE+ A L ELEP
Sbjct: 760 VVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPED 819
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++N+YA+ G+WD R MM+ VKK PG+S + + F V D
Sbjct: 820 SATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGD 873
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 250/519 (48%), Gaps = 5/519 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS-DFLYSQMI 76
++ W+ I ++K +++ L LF M + ++ P ++F + +AC+ Y++ I
Sbjct: 75 SVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQI 134
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ + ++ +YAK + A K+FD + +D SW AMI GF+Q G+
Sbjct: 135 HARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYE 194
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E+ + LF M GI + K + + +H+ G + VCN
Sbjct: 195 EEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNAL 254
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++ Y++ + AE VF ++ + VS+NS+I G D +L + M D +P
Sbjct: 255 VTLYSRMPNFVSAEKVFSKMQS--KDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKP 312
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TV SLLS+C AL +G +HS+ I G D+ V L+ +Y C DI +A +F
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF 372
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
V W M+ + + +L E+ R+F M+ G +P+ T S++ C GAL+
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALD 432
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG+ G + NV VC+ LIDMY+K G + A + L E VVSWT +I+G A
Sbjct: 433 LGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYA 492
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ F EAL F +M+ ++ + + F + + AC L +G + + V + +L
Sbjct: 493 QHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG-RQIHAQSYVSGYSEDL 551
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + + L R G++KEA + + K D+ W L+
Sbjct: 552 SIGNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLI 589
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 236/500 (47%), Gaps = 9/500 (1%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M+ I N T+ ++ C + + +HG I+K F ++ + +VD+Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
LD K+F+ MP+R V SW+ +I GF + +VL LF M + ++ + +A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 165 -AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
+ H + + +H+ I G+ + N I YAK + A VF + +
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL--CTKDS 178
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSW ++I G + +++++ + M G P S+LS C + G +H+
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
YG L+ V N L+++YS+ + SA +F M + VS+ ++ISG AQ+G D A
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
L LF M+ PD VTV S++S C +GAL G+ +Y G+ +++V AL+D+
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y C I A E+F + VV W M+ E+ +F QM L PN+ T+
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQS 521
++L+ CT G L+ G + T+V + + N Y C + D+ + GKL A +++
Sbjct: 419 PSILRTCTSVGALDLGE---QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRT 475
Query: 522 MPIKSDAGIWGTLLCACKIH 541
+ + D W L+ H
Sbjct: 476 LT-EDDVVSWTALISGYAQH 494
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 334/604 (55%), Gaps = 10/604 (1%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
+R + WN IR +A+ L+ +M I PN TFPF+ KAC+ L +
Sbjct: 79 HRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEG 138
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA-Q 132
+ IH I + S+++V T +VD YAKC LD A ++FDKM RDV +WN+MI GF+
Sbjct: 139 REIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLH 198
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G ++V L M+ + + T++G+ A L K +H F + G DV V
Sbjct: 199 EGSYDEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVV 257
Query: 193 CNTWISAYAKCNDLKMAELVF--RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+ Y KC + A +F GI ++ V+W++++G D ++L + ++
Sbjct: 258 GTGILDVYGKCQCIDYARRIFDMMGI---VKNEVTWSAMVGAYVVCDFMREALELFCQLL 314
Query: 251 Y---DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
D T+ +++ C L G +H + I GF LD+ V NTL+SMY+KCG
Sbjct: 315 MLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCG 374
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
I+ A F+ M R VS+TA+ISGY Q G+ +E LR+F M+ +G P+ T+ S++
Sbjct: 375 IINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLP 434
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C L G YA G + M+CNALIDMY+KCG I AR++F + ++ +VS
Sbjct: 435 ACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVS 494
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W TMI ++G +EAL LF M L+P+ VTF+ ++ AC+H+G + +G +FN MT
Sbjct: 495 WNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMT 554
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ + + P + HY+CM DLL R G KE F++ MP++ D +WG LL AC++++N+E+G
Sbjct: 555 QDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELG 614
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E V+ ++ +L P S +V ++N+Y+ GRWD A +R K +K PG S + I+G
Sbjct: 615 EGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGV 674
Query: 608 TCTF 611
TF
Sbjct: 675 VHTF 678
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 204/433 (47%), Gaps = 15/433 (3%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT-------MVDMYAKCDRLDCAYKLF 112
+ ++C + ++IH H++K + T +VD+Y C L A +F
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 113 DKMPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
DKMP R +V WN +I +A G E+ + L+Y M GI + T + +A K
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
S + +H + ++++V V + YAKC L A+ VF + + R VV+WNS+I
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHK--RDVVAWNSMI 192
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + + D + + + P+ +T+V +L + +L G+ +H + GF
Sbjct: 193 SGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFV 252
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
DV V ++ +Y KC ID AR +FD M + V+W+AM+ Y + EAL LF
Sbjct: 253 GDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQ 312
Query: 350 MEAAGE---VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
+ + V VT+ ++I C L G YA G ++MV N L+ MY+K
Sbjct: 313 LLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAK 372
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
CG I A F + + VS+T +I+G NG E L +F +M + P + T +V
Sbjct: 373 CGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASV 432
Query: 467 LQACTHAGFLEKG 479
L AC H L G
Sbjct: 433 LPACAHLAGLHYG 445
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 335/600 (55%), Gaps = 2/600 (0%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ WN+ I +A LFR+M +EP+ +TF + AC+ + + +
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKE 179
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H +V + F SD + T +V MY K +D A ++FD + RDV+++N M+ G+A+ G
Sbjct: 180 VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGD 239
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
EK LFY M+ VG++ + ++ + + + L+ K+VH+ ++ G+ D+ V +
Sbjct: 240 WEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATS 299
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I Y C ++ A VF ++ +R VVSW +I G +D+ + M +G +
Sbjct: 300 LIRMYTTCGSIEGARRVFDNMK--VRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD T + ++++C L R +HS GF D+ V L+ MY+KCG I AR +
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQV 417
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M R VSW+AMI Y + G EA F M+ + PD VT +++++ CG GAL
Sbjct: 418 FDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGAL 477
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
++G A L +V + NALI M +K GS+ AR +F + + V++W MI G
Sbjct: 478 DVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGY 537
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+L+G EAL LF +M++ RPN VTF+ VL AC+ AGF+++G +F + + + P
Sbjct: 538 SLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPT 597
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ Y CM DLLGR G+L EA ++SMP+K + IW +LL AC+IH N+++ E A R
Sbjct: 598 VKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCL 657
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++P+ A YV+++++YA G W+ VA +R +M+ ++K G + + + GK TF VED
Sbjct: 658 MIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVED 717
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 268/525 (51%), Gaps = 10/525 (1%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
+ +R+ + ++ T+ + + C +L D + + HI++ +I+ T++ +Y+
Sbjct: 44 VLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYS 103
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
C + A ++FD + ++ V +WNA+I G+AQ+G +++ LF M G++ +T +
Sbjct: 104 ICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLS 163
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ A L+ K VH+ + G +D + +S Y K + A VF G+ +
Sbjct: 164 VLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH--I 221
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R V ++N ++GG ++ + + M G +P+ + +S+L C PEAL G+ V
Sbjct: 222 RDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAV 281
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+ ++ G D+ V +LI MY+ CG I+ AR +FD M R VSWT MI GYA+ G++
Sbjct: 282 HAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNI 341
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
++A LF M+ G PD +T + +++ C S L + + G +++V AL
Sbjct: 342 EDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTAL 401
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+ MY+KCG+I DAR++F A+P + VVSW+ MI NG EA + FH M ++ P+
Sbjct: 402 VHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDG 461
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN--PELNHYSCMADLLGRKGKLKEALDF 518
VT++ +L AC H G L+ G + K V+ P N M + G ++ A
Sbjct: 462 VTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMN---AKHGSVERARYI 518
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE--LEPHS 561
+M ++ D W ++ +H N Y+ R+ + P+S
Sbjct: 519 FDTM-VRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNS 562
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/579 (37%), Positives = 325/579 (56%), Gaps = 4/579 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL L+ RM +I PN TFP + K CA +SD + IH H+++ F SD+ V ++
Sbjct: 181 EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALI 240
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY KC + A LFDKMP RD SWNAMI G+ + G + L LF MR + + D +
Sbjct: 241 TMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLI 300
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ + A + L + VH + + D+S+ N+ I Y+ L+ AE VF +
Sbjct: 301 TMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM 360
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E + VVSW ++I ++ Y+ M +G PD T+VS+LS+C C L
Sbjct: 361 ES--KDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL 418
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G +H I G V V N+LI MYSKC +D+A +F + + VSWT++I G
Sbjct: 419 GIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRI 478
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
EAL LFF P+ VT++S++S C + GAL GK +A G+ + +
Sbjct: 479 NNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFL 537
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
NA++DMY +CG A F + +K V +W ++ G A G+ A++LF +M+EL++
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
P+ +TF+++L AC+ +G + +G YFN+M Y + P L HY+C+ D+LGR G+L +A
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
DF+Q MPI+ DA IWG LL AC+IHRN+E+GE A R+FE + S Y+ + N+YA G
Sbjct: 657 DFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCG 716
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
WD V+ +R++M+ + PG S V I GK F D
Sbjct: 717 NWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGD 755
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 236/470 (50%), Gaps = 10/470 (2%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
++ M+ + L A+ +F KM +RDV SWN ++ G+A+ G ++ L L++ M I+
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ T + + ++ K +H+ I G ++DV V N I+ Y KC D+ A ++
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + R +SWN++I G + L + M PD+ T+ ++ S+C +
Sbjct: 256 FDKMPK--RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
GR VH + + F D+S+ N+LI MYS G ++ A +F M + VSWTAMI+
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
+A+ + ME G +PD +T++S++S C G L+LG A GL
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+V+V N+LIDMYSKC + +A E+F + K VVSWT++I G +N EAL F QM
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKG 510
E ++PN VT ++VL AC G L +G + + + + + + D+ R G
Sbjct: 494 E-SMKPNSVTLISVLSACARIGALMRGK---EIHAHALRTGVGFDGFLPNAILDMYVRCG 549
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
+ AL+ S K D W LL ++ + ++ ELE H
Sbjct: 550 RKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 162/291 (55%), Gaps = 4/291 (1%)
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + N +S + + +L A VF + E R V SWN ++GG FD++LN Y M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSE--RDVFSWNVLVGGYAKAGCFDEALNLYHRM 189
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
++ RP+V T S+L +C + +G+ +H+H I +GF+ DV V N LI+MY KCGDI
Sbjct: 190 LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+AR LFD M R R+SW AMISGY + G E L LF M PDL+T+ ++ S C
Sbjct: 250 SNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
LG+ Y ++ + N+LI MYS G + +A +F + K VVSWT
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKG 479
MIA + +A++ + +MMEL+ + P+ +T ++VL AC G L+ G
Sbjct: 370 AMIASLVSHKLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLG 419
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 3/297 (1%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL C A +G V+ L V + N L+SM+ + G++ A ++F M +
Sbjct: 101 IALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSE 160
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R SW ++ GYA+ G DEAL L+ M A P++ T S++ C + GK
Sbjct: 161 RDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEI 220
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G + +V V NALI MY KCG I +AR LF +P++ +SW MI+G NG
Sbjct: 221 HAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGG 280
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+E L+LF M EL + P+ +T V AC G G + K + +++ +
Sbjct: 281 LEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVK-SEFGGDISMNNS 339
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+ + G+L+EA M K D W ++ + H+ + Y++ ELE
Sbjct: 340 LIQMYSSLGRLEEAETVFSRMESK-DVVSWTAMIASLVSHK-LPFKAVETYKMMELE 394
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 4/263 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
S + W + I V KA+ ++ M+ I P+ +T + ACA +
Sbjct: 361 ESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGI 420
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +K+ S + V +++DMY+KC +D A ++F + ++V SW ++I+G
Sbjct: 421 RLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINN 480
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L F M+ ++ + VT++ + A L K +H+ + GV D + N
Sbjct: 481 RSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN 539
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y +C A F + + V +WN ++ G + ++ + M+
Sbjct: 540 AILDMYVRCGRKVPALNQFNSQK---KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 255 RPDVTTVVSLLSSCVCPEALVQG 277
PD T +SLL +C + +G
Sbjct: 597 HPDEITFISLLCACSKSGMVTEG 619
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/579 (37%), Positives = 325/579 (56%), Gaps = 4/579 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL L+ RM +I PN TFP + K CA +SD + IH H+++ F SD+ V ++
Sbjct: 181 EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALI 240
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY KC + A LFDKMP RD SWNAMI G+ + G + L LF MR + + D +
Sbjct: 241 TMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLI 300
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ + A + L + VH + + D+S+ N+ I Y+ L+ AE VF +
Sbjct: 301 TMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM 360
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E + VVSW ++I ++ Y+ M +G PD T+VS+LS+C C L
Sbjct: 361 ES--KDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL 418
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G +H I G V V N+LI MYSKC +D+A +F + + VSWT++I G
Sbjct: 419 GIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRI 478
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
EAL LFF P+ VT++S++S C + GAL GK +A G+ + +
Sbjct: 479 NNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFL 537
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
NA++DMY +CG A F + +K V +W ++ G A G+ A++LF +M+EL++
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
P+ +TF+++L AC+ +G + +G YFN+M Y + P L HY+C+ D+LGR G+L +A
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
DF+Q MPI+ DA IWG LL AC+IHRN+E+GE A R+FE + S Y+ + N+YA G
Sbjct: 657 DFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCG 716
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
WD V+ +R++M+ + PG S V I GK F D
Sbjct: 717 NWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGD 755
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 236/470 (50%), Gaps = 10/470 (2%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
++ M+ + L A+ +F KM +RDV SWN ++ G+A+ G ++ L L++ M I+
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ T + + ++ K +H+ I G ++DV V N I+ Y KC D+ A ++
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + R +SWN++I G + L + M PD+ T+ ++ S+C +
Sbjct: 256 FDKMPK--RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
GR VH + + F D+S+ N+LI MYS G ++ A +F M + VSWTAMI+
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
+A+ + ME G +PD +T++S++S C G L+LG A GL
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+V+V N+LIDMYSKC + +A E+F + K VVSWT++I G +N EAL F QM
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKG 510
E ++PN VT ++VL AC G L +G + + + + + + D+ R G
Sbjct: 494 E-SMKPNSVTLISVLSACARIGALMRGK---EIHAHALRTGVGFDGFLPNAILDMYVRCG 549
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
+ AL+ S K D W LL ++ + ++ ELE H
Sbjct: 550 RKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 162/291 (55%), Gaps = 4/291 (1%)
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + N +S + + +L A VF + E R V SWN ++GG FD++LN Y M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSE--RDVFSWNVLVGGYAKAGCFDEALNLYHRM 189
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
++ RP+V T S+L +C + +G+ +H+H I +GF+ DV V N LI+MY KCGDI
Sbjct: 190 LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+AR LFD M R R+SW AMISGY + G E L LF M PDL+T+ ++ S C
Sbjct: 250 SNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
LG+ Y ++ + N+LI MYS G + +A +F + K VVSWT
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKG 479
MIA + +A++ + +MMEL+ + P+ +T ++VL AC G L+ G
Sbjct: 370 AMIASLVSHKLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLG 419
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 3/297 (1%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL C A +G V+ L V + N L+SM+ + G++ A ++F M +
Sbjct: 101 IALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSE 160
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R SW ++ GYA+ G DEAL L+ M A P++ T S++ C + GK
Sbjct: 161 RDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEI 220
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G + +V V NALI MY KCG I +AR LF +P++ +SW MI+G NG
Sbjct: 221 HAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGG 280
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+E L+LF M EL + P+ +T V AC G G + K + +++ +
Sbjct: 281 LEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVK-SEFGGDISMNNS 339
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+ + G+L+EA M K D W ++ + H+ + Y++ ELE
Sbjct: 340 LIQMYSSLGRLEEAETVFSRMESK-DVVSWTAMIASLVSHK-LPFKAVETYKMMELE 394
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 4/263 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
S + W + I V KA+ ++ M+ I P+ +T + ACA +
Sbjct: 361 ESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGI 420
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +K+ S + V +++DMY+KC +D A ++F + ++V SW ++I+G
Sbjct: 421 RLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINN 480
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L F M+ ++ + VT++ + A L K +H+ + GV D + N
Sbjct: 481 RSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN 539
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y +C A F + + V +WN ++ G + ++ + M+
Sbjct: 540 AILDMYVRCGRKVPALNQFNSQK---KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 255 RPDVTTVVSLLSSCVCPEALVQG 277
PD T +SLL +C + +G
Sbjct: 597 HPDEITFISLLCACSKSGMVTEG 619
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 332/595 (55%), Gaps = 4/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
+N IR D ++ L+ + KK ++ P+N T+ F A ++L D ++H H
Sbjct: 80 FNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHS 139
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ S++FV + +VD+Y K R + A K+FD MP+RD WN MI GF++ + E +
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M VG+ D T+ + A + L + G+ +DV V IS Y
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLY 259
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC ++F I++ ++S+N++I G T+ + + ++ +R ++ G R + +T
Sbjct: 260 SKCGKSCKGRILFDQIDQP--DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+V L+ + L RL+ + + G L SV L ++Y + ++ AR LFD
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+++ SW AMISGY Q G D A+ LF M P+ VTV S++S C Q GAL +GKW
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS-PNPVTVTSILSACAQLGALSIGKW 436
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
S L+ NV V AL+DMY+KCGSI +AR+LF + +K VV+W MI G L+G
Sbjct: 437 VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL LF++M++ + P VTFL++L AC+H+G + +G F+ M Y P HY+
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM D+LGR G+L AL+F++ MP++ +WG LL AC IH+N E+ + RLF+L+P
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPE 616
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++NIY+ + A++R ++K+ ++ K PG +L+ I+ + FT D
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGD 671
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 204/433 (47%), Gaps = 6/433 (1%)
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHA 168
+LF+K+ D+ +N +I GF+ G + + L+ ++R ++ D T AA
Sbjct: 67 QLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRL 126
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ + +H+ I GV +++ V + + Y K ++A VF + E R V WN+
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE--RDTVLWNT 184
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+I G + F+DS+ + M+ G D TT+ ++L++ + G + G
Sbjct: 185 MISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKG 244
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
DV V+ LIS+YSKCG R LFD + +S+ AMISGY + + A+ LF
Sbjct: 245 LHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFR 304
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
+ A+G+ + T++ +I L+L + N + G+ V AL +Y +
Sbjct: 305 ELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ AR+LF PEK++ SW MI+G NG A+ LF +MM L PN VT ++L
Sbjct: 365 EVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILS 423
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC G L G + + + K ++ + + + D+ + G + EA M + +
Sbjct: 424 ACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNV 481
Query: 529 GIWGTLLCACKIH 541
W ++ +H
Sbjct: 482 VTWNAMITGYGLH 494
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+Q +L+ HGIHY D+S I L + G + R LF+ + + +I G+
Sbjct: 33 IQAQLI-LHGIHY----DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGF 87
Query: 335 AQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
+ G ++ L+ + + PD T IS + +G ++ G+ N
Sbjct: 88 SDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASN 147
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ V +A++D+Y K AR++F +PE+ V W TMI+G + N F +++ +F M++
Sbjct: 148 LFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLD 207
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ L + T VL A G G L +K
Sbjct: 208 VGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASK 242
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/595 (34%), Positives = 332/595 (55%), Gaps = 4/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
+N IR D ++ L+ ++K ++ P+N T+ F A ++L D ++H H
Sbjct: 80 FNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHS 139
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ S++FV + +VD+Y K R + A K+FD MP+RD WN MI GF++ + E +
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M VG+ D T+ + A + L + G+ +DV V IS Y
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLY 259
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC ++F I++ ++S+N++I G T+ + + ++ +R ++ G R + +T
Sbjct: 260 SKCGKSCKGRILFDQIDQP--DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+V L+ + L RL+ + + G L SV L ++Y + ++ AR LFD
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+++ SW AMISGY Q G D A+ LF M P+ VTV S++S C Q GAL +GKW
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS-PNPVTVTSILSACAQLGALSIGKW 436
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
S L+ NV V AL+DMY+KCGSI +AR+LF + +K VV+W MI G L+G
Sbjct: 437 VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL LF++M++ + P VTFL++L AC+H+G + +G F+ M Y P HY+
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM D+LGR G+L AL+F++ MP++ +WG LL AC IH+N E+ + RLF+L+P
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPE 616
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++NIY+ + A++R ++K+ ++ K PG +L+ I+ + FT D
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGD 671
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 204/433 (47%), Gaps = 6/433 (1%)
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHA 168
+LF+K+ D+ +N +I GF+ G + + L+ ++R ++ D T AA
Sbjct: 67 QLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRL 126
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ + +H+ I GV +++ V + + Y K ++A VF + E R V WN+
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE--RDTVLWNT 184
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+I G + F+DS+ + M+ G D TT+ ++L++ + G + G
Sbjct: 185 MISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKG 244
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
DV V+ LIS+YSKCG R LFD + +S+ AMISGY + + A+ LF
Sbjct: 245 LHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFR 304
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
+ A+G+ + T++ +I L+L + N + G+ V AL +Y +
Sbjct: 305 ELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ AR+LF PEK++ SW MI+G NG A+ LF +MM L PN VT ++L
Sbjct: 365 EVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILS 423
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC G L G + + + K ++ + + + D+ + G + EA M + +
Sbjct: 424 ACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNV 481
Query: 529 GIWGTLLCACKIH 541
W ++ +H
Sbjct: 482 VTWNAMITGYGLH 494
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+Q +L+ HGIHY D+S I L + G + R LF+ + + +I G+
Sbjct: 33 IQAQLI-LHGIHY----DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGF 87
Query: 335 AQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
+ G ++ L+ + + PD T IS + +G ++ G+ N
Sbjct: 88 SDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASN 147
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ V +A++D+Y K AR++F +PE+ V W TMI+G + N F +++ +F M++
Sbjct: 148 LFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLD 207
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ L + T VL A G G L +K
Sbjct: 208 VGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASK 242
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 327/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I AL +F M+ + P+ +T + ACA + D + +H +++
Sbjct: 212 FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLL 271
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D ++ +++D+Y KC + A ++F +V WN M+V + Q+ L K
Sbjct: 272 KAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFD 331
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G++ + T L + +A ++L + +H I G ++D+ V I Y+
Sbjct: 332 LFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYS 391
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A + +E + VVSW S+I G + ++L ++ M G PD +
Sbjct: 392 KYGWLDKARRILEVLEA--KDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGL 449
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +S+C +A+ QG+ +HS G+ DVS+ N L+++Y++CG A LF+ +
Sbjct: 450 ASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEH 509
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +++W M+SG+AQ G +EAL +F M AG ++ T +S IS ++ GK
Sbjct: 510 KDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQI 569
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G V NALI +Y KCGSI DA+ F+ + E+ VSW T+I C+ +G
Sbjct: 570 HATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWG 629
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+EALDLF QM + L+PN VTF+ VL AC+H G +E+G GYF M+ + ++P +HY+C
Sbjct: 630 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYAC 689
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ D+LGR G+L A FV+ MP+ ++A +W TLL AC++H+NIEIGE A L ELEPH
Sbjct: 690 VVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHD 749
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++N YA+ G+W ++R MMK V+K PG+S + + F V D
Sbjct: 750 SASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGD 803
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 245/510 (48%), Gaps = 10/510 (1%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+A+ L+ +M + + P + AC K + F +++H + K S+ V
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++ +Y + L A ++F +MP D ++N +I AQ G E L +F MRL G D
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
VT+ L A L+ K +HS+ + G+ D + + + Y KC + A +F+
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 215 GIEEGLRT-VVSWNSIIGGCTYGDKFD--DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
G RT VV WN ++ YG D S + + M+ G RP+ T LL +C
Sbjct: 304 ---SGDRTNVVLWNLML--VAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYA 358
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+ G +H I GF+ D+ V LI MYSK G +D AR + + + + VSWT+MI
Sbjct: 359 GEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMI 418
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
+GY Q EAL F M+ G PD + + S IS C A+ G+ + G
Sbjct: 419 AGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYS 478
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+V + NAL+++Y++CG +A LF A+ K ++W M++G A +G + EAL++F +M
Sbjct: 479 ADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKM 538
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
+ ++ N TF++ + A + +++G + K E + + L G+ G
Sbjct: 539 YQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGS 597
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+++A M ++ W T++ +C H
Sbjct: 598 IEDAKMQFFEMSERNHVS-WNTIITSCSQH 626
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 221/464 (47%), Gaps = 10/464 (2%)
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+IH + D ++D+YAK + A ++F+++ RD SW AM+ G+A+ G
Sbjct: 63 VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E+ + L++ M G+ + + A A + VH+ G ++ V N
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGN 182
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I+ Y + L +AE VF + R V++N++I + +L + M G+
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPYCDR--VTFNTLISRHAQCGNGESALEIFEEMRLSGW 240
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T+ SLL++C L +G+ +HS+ + G D + +L+ +Y KCG I A
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300
Query: 315 LFDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F DRT V W M+ Y Q DL ++ LF M AAG P+ T ++ C +G
Sbjct: 301 IFKS-GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAG 359
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+ LG+ + G + ++ V LIDMYSK G + AR + L K VVSWT+MIA
Sbjct: 360 EINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIA 419
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY--Q 491
G + EAL+ F M + P+ + + + AC + +G + ++VY
Sbjct: 420 GYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQ---QIHSRVYVSG 476
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ +++ ++ + +L R G+ KEA +++ K D W ++
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHK-DKITWNGMV 519
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 201/425 (47%), Gaps = 11/425 (2%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLF----YNMRLVGIQADFVTVMGLTQAAIHAKH 170
M R AS N + GF EK+L LF R +G DF + + ++ KH
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLG-SVDFACALRECRGSV--KH 57
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L+ +H+ I G+ D N I YAK ++ A VF + R VSW +++
Sbjct: 58 WPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSA--RDNVSWVAML 115
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G ++++ Y M G P + S+LS+C QGRLVH+ G
Sbjct: 116 SGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSC 175
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+ V N LI++Y + G + A +F M RV++ +IS +AQ G+ + AL +F M
Sbjct: 176 SETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEM 235
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+G PD VT+ S+++ C G L GK +Y G+ + ++ +L+D+Y KCG I
Sbjct: 236 RLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVI 295
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+A E+F + VV W M+ + ++ DLF QM+ +RPN T+ +L+ C
Sbjct: 296 VEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTC 355
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
T+AG + G +L++ ++ + D+ + G L +A ++ + K D
Sbjct: 356 TYAGEINLG-EQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK-DVVS 413
Query: 531 WGTLL 535
W +++
Sbjct: 414 WTSMI 418
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 15/328 (4%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ ++ + + W S I V +AL F+ M+ I P+N+ ACA +
Sbjct: 401 RILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIK 460
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
Q IH + S + +D+ + +V++YA+C R A+ LF+ + +D +WN M+
Sbjct: 461 AMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVS 520
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GFAQ G E+ L +F M G++ + T + A+ + + K +H+ I G +
Sbjct: 521 GFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTS 580
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V N IS Y KC ++ A++ F + E R VSWN+II C+ ++L+ +
Sbjct: 581 ETEVANALISLYGKCGSIEDAKMQFFEMSE--RNHVSWNTIITSCSQHGWGLEALDLFDQ 638
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGIHYGFDLDVSVINTLISMY 303
M +G +P+ T + +L++C + +G + HGIH D V++ L
Sbjct: 639 MKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDIL---- 694
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+ G +D AR + M VS AM+
Sbjct: 695 GRAGQLDRARKFVEEM----PVSANAMV 718
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/590 (34%), Positives = 334/590 (56%), Gaps = 5/590 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I E A ++ M++ I+P+++T + +L ++ Q +H ++
Sbjct: 117 WTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLEL---VHLQCLHACVI 173
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD+ + +M+++Y KC R++ A LF+ M RDV SWN+++ G+AQ+G + +VL
Sbjct: 174 QYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQ 233
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M+ GI+ D T L AA L + K VH + G++ D + + I Y
Sbjct: 234 LLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYL 293
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F G+ + V+SW ++I G D D ++ +R M+ P T+
Sbjct: 294 KCGNVNSAFRIFEGMMH--KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATI 351
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L++C + G VH + + LD+ N+L++MY+KCG ++ + +FD M
Sbjct: 352 ASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSR 411
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A++SG+AQ G L +AL LF M A + PD +TV+S++ C GAL GKW
Sbjct: 412 RDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWI 471
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N+ L +++ AL+DMYSKCG +G A++ F +P++ +VSW+++IAG +G+
Sbjct: 472 HNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKG 531
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL ++ + ++PN V +L++L AC+H G +++G +F+ MTK + + P L H +C
Sbjct: 532 ETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRAC 591
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R G+++EA F + M K + G LL AC+ N+E+G+ VA + L+P +
Sbjct: 592 IVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPAN 651
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
A YV++A+ YA RWDGV + T MK +KK PG S + ++G TF
Sbjct: 652 AGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTF 701
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 257/503 (51%), Gaps = 7/503 (1%)
Query: 39 LLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDM 98
LL + M D P+ TFP + KAC L F + H ++ + SD ++ T++++
Sbjct: 33 LLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINF 92
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
Y+K A K+FD M DR+V W MI + + G + ++ MR GIQ VT+
Sbjct: 93 YSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTM 152
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+GL + HL L H+ I G +DV++ N+ ++ Y KC ++ A+ +F ++
Sbjct: 153 LGLLSGVLELVHLQCL---HACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDA 209
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R V+SWNS++ G + L M DG PD T SL+S+ L G+
Sbjct: 210 --RDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGK 267
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+VH H + G + D + +LI MY KCG+++SA +F+GM + +SWTAMISG Q
Sbjct: 268 MVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQND 327
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
D A+ +F M + +P T+ S+++ C + G+ LG Y +K ++ N
Sbjct: 328 CADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQN 387
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+L+ MY+KCG + + +F + + +VSW +++G A NG +AL LF++M + RP
Sbjct: 388 SLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRP 447
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ +T +++LQAC G L +G N +TK + P + + + D+ + G L A
Sbjct: 448 DSITVVSLLQACASIGALHQGKWIHNFVTKSC-LGPCILIDTALVDMYSKCGDLGSAQKC 506
Query: 519 VQSMPIKSDAGIWGTLLCACKIH 541
MP + D W +++ H
Sbjct: 507 FDRMP-QQDLVSWSSIIAGYGSH 528
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 179/358 (50%), Gaps = 5/358 (1%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
S+NA+I + G VL + +M D T L +A S S H
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
I G +D + + I+ Y+K + A VF +++ R VV W ++IG T + D
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDD--RNVVPWTTMIGCYTRAGEHDV 132
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ + Y M G +P T++ LLS + LV + +H+ I YGF DV++ N++++
Sbjct: 133 AFSMYNIMRRQGIQPSSVTMLGLLSGVL---ELVHLQCLHACVIQYGFGSDVALANSMLN 189
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
+Y KCG ++ A+ LF+ M R +SW +++SGYAQ G++ E L+L M+ G PD T
Sbjct: 190 VYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S++S L +GK + GL+ + + +LI MY KCG++ A +F +
Sbjct: 250 FGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
K V+SWT MI+G N A+ +F +M++ + P+ T +VL AC G G
Sbjct: 310 HKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLG 367
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ + KALLLF M+K P+++T + +ACA + + IH
Sbjct: 414 IVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHN 473
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ KS I + T +VDMY+KC L A K FD+MP +D+ SW+++I G+ G E
Sbjct: 474 FVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGET 533
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
L ++ + GIQ + V + + A H
Sbjct: 534 ALRMYSDFLHTGIQPNHVIYLSILSACSH 562
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 335/595 (56%), Gaps = 6/595 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
+N +R + ++ L+ +++N ++ P+N T+ F AC+ + ++H H
Sbjct: 78 FNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LLHAHS 134
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ + S++FV + +VD+Y K R+ A K+FD MP+RD WN MI G + + +
Sbjct: 135 IIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSI 194
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M G++ D TV + AA + L + + + IG V IS Y
Sbjct: 195 QLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLY 254
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC D+ A L+FR I ++++N++I G T + S+ +R +++ G R +T
Sbjct: 255 SKCGDVNTARLLFRRINR--PDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSST 312
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+V L+ L +H + G L+ +V ++Y+K +ID AR LFD
Sbjct: 313 IVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP 372
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++T V+W AMISGY Q G + A+ LF M P+ VT+ +++S C Q G+L GKW
Sbjct: 373 EKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKW 432
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ S L+ N+ V AL+DMY+KCG+I +A +LF ++ EK V+W TMI G L+G
Sbjct: 433 VHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGY 492
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL L+++M+ L P+ VTFL+VL AC+HAG + +G F+ M Y++ P + HY+
Sbjct: 493 GHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYA 552
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM D+LGR G+L++AL+F++ MP++ +WGTLL AC IH++ +I + RLFEL+P
Sbjct: 553 CMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPG 612
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
S YV ++NIY++ + A++R ++K+ ++ K PG +L+ +NG F D
Sbjct: 613 SVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGD 667
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I A+ LF+ M K + PN +T I ACA+L + + +H
Sbjct: 375 TVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH 434
Query: 78 GHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H++KS +I+V T +VDMYAKC + A++LFD M +++ +WN MI G+ G+
Sbjct: 435 -HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYG 493
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L L+ M +G VT + + A HA
Sbjct: 494 HEALKLYNEMLHLGYNPSAVTFLSVLYACSHA 525
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/590 (34%), Positives = 334/590 (56%), Gaps = 5/590 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I E A ++ M++ I+P+++T + +L ++ Q +H ++
Sbjct: 117 WTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLEL---VHLQCLHACVI 173
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD+ + +M+++Y KC R++ A LF+ M RDV SWN+++ G+AQ+G + +VL
Sbjct: 174 QYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQ 233
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M+ GI+ D T L AA L + K VH + G++ D + + I Y
Sbjct: 234 LLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYL 293
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F G+ + V+SW ++I G D D ++ +R M+ P T+
Sbjct: 294 KCGNVNSAFRIFEGMMH--KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATI 351
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L++C + G VH + + LD+ N+L++MY+KCG ++ + +FD M
Sbjct: 352 ASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSR 411
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A++SG+AQ G L +AL LF M A + PD +TV+S++ C GAL GKW
Sbjct: 412 RDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWI 471
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N+ L +++ AL+DMYSKCG +G A++ F +P++ +VSW+++IAG +G+
Sbjct: 472 HNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKG 531
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL ++ + ++PN V +L++L AC+H G +++G +F+ MTK + + P L H +C
Sbjct: 532 ETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRAC 591
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R G+++EA F + M K + G LL AC+ N+E+G+ VA + L+P +
Sbjct: 592 IVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPAN 651
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
A YV++A+ YA RWDGV + T MK +KK PG S + ++G TF
Sbjct: 652 AGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTF 701
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 257/503 (51%), Gaps = 7/503 (1%)
Query: 39 LLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDM 98
LL + M D P+ TFP + KAC L F + H ++ + SD ++ T++++
Sbjct: 33 LLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINF 92
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
Y+K A K+FD M DR+V W MI + + G + ++ MR GIQ VT+
Sbjct: 93 YSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTM 152
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+GL + HL L H+ I G +DV++ N+ ++ Y KC ++ A+ +F ++
Sbjct: 153 LGLLSGVLELVHLQCL---HACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDA 209
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R V+SWNS++ G + L M DG PD T SL+S+ L G+
Sbjct: 210 --RDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGK 267
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+VH H + G + D + +LI MY KCG+++SA +F+GM + +SWTAMISG Q
Sbjct: 268 MVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQND 327
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
D A+ +F M + +P T+ S+++ C + G+ LG Y +K ++ N
Sbjct: 328 CADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQN 387
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+L+ MY+KCG + + +F + + +VSW +++G A NG +AL LF++M + RP
Sbjct: 388 SLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRP 447
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ +T +++LQAC G L +G N +TK + P + + + D+ + G L A
Sbjct: 448 DSITVVSLLQACASIGALHQGKWIHNFVTKSC-LGPCILIDTALVDMYSKCGDLGSAQKC 506
Query: 519 VQSMPIKSDAGIWGTLLCACKIH 541
MP + D W +++ H
Sbjct: 507 FDRMP-QQDLVSWSSIIAGYGSH 528
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 179/358 (50%), Gaps = 5/358 (1%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
S+NA+I + G VL + +M D T L +A S S H
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
I G +D + + I+ Y+K + A VF +++ R VV W ++IG T + D
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDD--RNVVPWTTMIGCYTRAGEHDV 132
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ + Y M G +P T++ LLS + LV + +H+ I YGF DV++ N++++
Sbjct: 133 AFSMYNIMRRQGIQPSSVTMLGLLSGVL---ELVHLQCLHACVIQYGFGSDVALANSMLN 189
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
+Y KCG ++ A+ LF+ M R +SW +++SGYAQ G++ E L+L M+ G PD T
Sbjct: 190 VYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S++S L +GK + GL+ + + +LI MY KCG++ A +F +
Sbjct: 250 FGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
K V+SWT MI+G N A+ +F +M++ + P+ T +VL AC G G
Sbjct: 310 HKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLG 367
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ + KALLLF M+K P+++T + +ACA + + IH
Sbjct: 414 IVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHN 473
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ KS I + T +VDMY+KC L A K FD+MP +D+ SW+++I G+ G E
Sbjct: 474 FVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGET 533
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
L ++ + GIQ + V + + A H
Sbjct: 534 ALRMYSDFLHTGIQPNHVIYLSILSACSH 562
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/634 (34%), Positives = 338/634 (53%), Gaps = 41/634 (6%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
+R + WN+ I + +AL+L+ RM + +++TF + AC+ L+
Sbjct: 70 WRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---G 126
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH + S S + +V MYA+ + A ++F + RD SWNA+I+ +Q
Sbjct: 127 REIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQS 186
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G L +F M+ ++ + T + + + L + +H+ + G D D+ V
Sbjct: 187 GDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVA 245
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
I+ Y KC A VF +++ R +VSWN +IG F ++L Y+ + +G
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKK--RDMVSWNVMIGCYVLNGDFHEALELYQKLDMEG 303
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F+ T VS+L +C +AL QGRLVHSH + G D +V+V L++MY+KCG ++ AR
Sbjct: 304 FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEAR 363
Query: 314 FLFDGMCDRTRV----------------------------------SWTAMISGYAQKGD 339
+F+ M +R V SW AMI+ Y Q G
Sbjct: 364 KVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGC 423
Query: 340 LDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
A+++F M AAG PD VT ++++ C G L K L+ NV+V N
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTN 483
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
LI+MY++CGS+ +A LF A EKTVVSWT M+A + G + EALDLF +M ++P
Sbjct: 484 TLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKP 543
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ VT+ ++L CTH G LE+GW YF M +++ + P +H++ M DLLGR G+L +A +
Sbjct: 544 DDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKEL 603
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
++SMP + D W T L AC+IH +E+GE A R++EL+P S APY+ M+NIYA G W
Sbjct: 604 LESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMW 663
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+ VA++R M+ +KK PG S + ++GK F+
Sbjct: 664 EKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFS 697
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 174/605 (28%), Positives = 277/605 (45%), Gaps = 86/605 (14%)
Query: 49 DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
D +P+N+TF + +C+ D + + +H I S F D V ++ MY KCD L A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 109 YKLFDKMP--DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAI 166
+F+ M R+V SWNAMI +AQ G + L L++ M L G+ D VT + + A
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC- 120
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
L+ + +H+ + G+D+ S+ N ++ YA+ + A+ +F+ ++ R SW
Sbjct: 121 --SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ--TRDETSW 176
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N++I + + +L ++ M D +P+ TT ++++S PE L +GR +H+ +
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
GFD D+ V LI+MY KCG AR +FD M R VSW MI Y GD EAL L
Sbjct: 236 NGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALEL 295
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
+ ++ G T +S++ C AL G+ ++ GL V V AL++MY+K
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAK 355
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGE-------------------------- 440
CGS+ +AR++F A+ + V+W+T+I A NG
Sbjct: 356 CGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMI 415
Query: 441 --------FVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYF------NL 485
V A+ +F +M L+P+ VTF+AVL+AC G L + L
Sbjct: 416 TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL 475
Query: 486 MTKVYQVNPELNHY------------------------SCMADLLGRKGKLKEALDFVQS 521
+ V N +N Y + M + G+ EALD Q
Sbjct: 476 ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQE 535
Query: 522 MP---IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE--LEPHSAAP----YVEMANIY 572
M +K D + ++L C ++E G +R F E H+ AP + M ++
Sbjct: 536 MDLEGVKPDDVTYTSILFVCTHGGSLEQG----WRYFTDMAELHALAPTADHFAAMVDLL 591
Query: 573 ALGGR 577
GR
Sbjct: 592 GRSGR 596
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/595 (36%), Positives = 332/595 (55%), Gaps = 4/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V ++ L LF+ M+K + + TF + ++CA LS +HGH +
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHAL 302
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F +D+ + T +DMY KC+ L A KLF+ +P+ ++ S+NA+IVG+A+ + L
Sbjct: 303 KTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALG 362
Query: 142 LFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F ++ G+ D V++ G +A A+ L L+ VH + +++ V N + Y
Sbjct: 363 MFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVANAILDMY 421
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC L A LVF E R VSWN+II + +L+ + M+ G PD T
Sbjct: 422 GKCGALVEACLVFE--EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFT 479
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+L +C +AL G +H+ I LD V LI MYSKCG ++ A L D +
Sbjct: 480 YGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA 539
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++T VSW A+ISG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 540 EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQ 599
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
L+ + + + L+DMYSKCG++ D + +F P + V+W M+ G A +G
Sbjct: 600 IHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGL 659
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL +F M +++PN TFLAVL+AC H G +EKG YF+ M Y ++P+L HYS
Sbjct: 660 GEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYS 719
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ D++GR G++ +AL+ ++ MP ++DA IW TLL CKIH N+E+ E AY + +LEP
Sbjct: 720 CVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPE 779
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++NIYA G W+ V LR MM+ N +KK PG S + I + F V D
Sbjct: 780 DSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGD 834
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 260/546 (47%), Gaps = 12/546 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + + K + +F +M + + TF + K+C+ L D IHG V
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV 201
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F D+ + ++DMYAKC +LDC+ + F MP+++ SW+A+I G Q L L
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLE 261
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ G+ T + ++ L L +H + DV + + Y
Sbjct: 262 LFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYM 321
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KCN+L A+ +F + + S+N+II G DK ++L +R + G D ++
Sbjct: 322 KCNNLSDAQKLFNSLPN--HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 379
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+C + ++G VH + ++ V N ++ MY KCG + A +F+ M
Sbjct: 380 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 439
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ + Q G+ ++ L LF M +G PD T S++ C AL G
Sbjct: 440 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEI 499
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N L + V ALIDMYSKCG + A +L L E+TVVSW +I+G +L +
Sbjct: 500 HNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 559
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYS 500
EA F +M+E+ + P+ T+ +L C + +E G + ++ K Q + ++ S
Sbjct: 560 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--S 617
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH----RNIEIGEYVAYRLFE 556
+ D+ + G +++ + P + D W ++C H ++I EY+ +L
Sbjct: 618 TLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQHGLGEEALKIFEYM--QLEN 674
Query: 557 LEPHSA 562
++P+ A
Sbjct: 675 VKPNHA 680
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 223/440 (50%), Gaps = 4/440 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ +N+ I ++ +AL +FR ++K+ + + ++ +ACA + L +H
Sbjct: 340 NLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVH 399
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G +KS S+I V ++DMY KC L A +F++M RD SWNA+I Q G E
Sbjct: 400 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEE 459
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
K L LF M G++ D T + +A + L+ +H+ I + D V I
Sbjct: 460 KTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALI 519
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC ++ AE + + E +TVVSWN+II G + + +++ + M+ G PD
Sbjct: 520 DMYSKCGMMEKAEKLHDRLAE--QTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 577
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L +C + G+ +H+ I D + +TL+ MYSKCG++ + +F+
Sbjct: 578 NFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFE 637
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+R V+W AM+ GYAQ G +EAL++F M+ P+ T L+++ CG G +E
Sbjct: 638 KAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEK 697
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G +F + + GL + + ++D+ + G + A EL +P E V W T+++ C
Sbjct: 698 GLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSIC 757
Query: 436 ALNGEFVEALDLFHQMMELD 455
++G A + +++L+
Sbjct: 758 KIHGNVEVAEKAAYSILQLE 777
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 209/473 (44%), Gaps = 54/473 (11%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TF I + C+ + H ++ + F +FV ++ MY KC L+ A+K+FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 116 PDRDVASWNAMIVGFAQMGFL-------------------------------EKVLCLFY 144
P RD SWNAM+ G+A G + KV+ +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 145 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLK------SVHSFGIHIGVDADVSVCNTWIS 198
M +G TV T A+ K S L+ +H + +G D DV + +
Sbjct: 164 QMGRMG------TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 217
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC L + F + E + VSW++II GC D L ++ M G
Sbjct: 218 MYAKCKKLDCSIQFFHSMPE--KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQ 275
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+T S+ SC AL G +H H + F DV + + MY KC ++ A+ LF+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-SGALEL 377
+ + S+ A+I GYA+ EAL +F ++ +G D V++ C G LE
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE- 394
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G + + N+ V NA++DMY KCG++ +A +F + + VSW +IA
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
NG + L LF M++ + P+ T+ +VL+AC GW N +++
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACA-------GWQALNCGMEIH 500
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 168/353 (47%), Gaps = 6/353 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N + YA D+ +A+ +F + E R VVSWNS+I G + ++ + M G
Sbjct: 112 NAMLFGYAGRGDIGVAQKLFDAMPE--RDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMG 169
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D TT +L SC E G +H + GFD DV + L+ MY+KC +D +
Sbjct: 170 TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSI 229
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F M ++ VSW+A+I+G Q DL L LF M+ AG T S+ C
Sbjct: 230 QFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLS 289
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
AL LG +A +V++ A +DMY KC ++ DA++LF +LP + S+ +I
Sbjct: 290 ALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIV 349
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH-AGFLEKGWGYFNLMTKVYQV 492
G A + + +EAL +F + + L + V+ +AC G LE + M + Q
Sbjct: 350 GYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQS 409
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
N + + + D+ G+ G L EA + M + DA W ++ A + + N E
Sbjct: 410 N--ICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEE 459
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 2/226 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+L+ T+ WN+ I + ++ +A F +M + ++P+N T+ I CA L
Sbjct: 533 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 592
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IH I+K SD ++ +T+VDMY+KC + +F+K P+RD +WNAM+
Sbjct: 593 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 652
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVD 187
G+AQ G E+ L +F M+L ++ + T + + +A H + L HS + G+D
Sbjct: 653 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 712
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ + + + + A + G+ V+ W +++ C
Sbjct: 713 PQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVI-WRTLLSIC 757
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/599 (34%), Positives = 323/599 (53%), Gaps = 3/599 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + W + + + + +LLFR+M + P+ T + K A L +++
Sbjct: 159 SDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVV 218
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG + K F S V ++ YAK +R A +FD MP RDV SWN+MI G G
Sbjct: 219 HGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLY 278
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+K + LF M L G + D T++ + A L L + VH + + G + S+ N
Sbjct: 279 DKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVL 338
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+ C+D + +FR + + + VVSW ++I T +D ++ M +G RP
Sbjct: 339 LDMYSNCSDWRSTNKIFRNMVQ--KNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRP 396
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D+ + S L + E L G+ VH + I G + ++V N L+ MY KCG+++ A+ +F
Sbjct: 397 DIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIF 456
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
DG+ + +SW +I GY++ +EA LF M P+ VT+ ++ +LE
Sbjct: 457 DGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLR-PNAVTMTCILPAAASLSSLE 515
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ YA G ++ V NALIDMY KCG++ AR LF L K ++SWT M+AG
Sbjct: 516 RGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYG 575
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
++G +A+ LF QM + P+ +F A+L AC+H+G ++GW +F+ M K +++ P L
Sbjct: 576 MHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRL 635
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY+CM DLL G LKEA +F+ SMPI+ D+ IW +LL C+IHRN+++ E VA R+FE
Sbjct: 636 KHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFE 695
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
LEP + YV +ANIYA RW+ V L+ + +++ G S + GK F ++
Sbjct: 696 LEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADN 754
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 205/393 (52%), Gaps = 4/393 (1%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKVLCLFYNM 146
D + +V MY KC L+ A ++FD+MP DV W A++ G+A+ G L + + LF M
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187
Query: 147 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
G++ D T+ + + + + VH +G + +V N ++ YAK N
Sbjct: 188 HCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRT 247
Query: 207 KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLS 266
K A LVF G+ R V+SWNS+I GCT +D ++ + M +G D T++S+L
Sbjct: 248 KDAILVFDGMPH--RDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLP 305
Query: 267 SCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS 326
+C L GR+VH + + GF S+ N L+ MYS C D S +F M + VS
Sbjct: 306 ACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVS 365
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
WTAMI+ Y + G D+ LF M G PD+ + S + + L+ GK YA
Sbjct: 366 WTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAI 425
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
G++ + V NAL++MY KCG++ +A+ +F + K ++SW T+I G + N EA
Sbjct: 426 RNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFS 485
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
LF +M+ L LRPN VT +L A LE+G
Sbjct: 486 LFTEML-LQLRPNAVTMTCILPAAASLSSLERG 517
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/658 (34%), Positives = 351/658 (53%), Gaps = 54/658 (8%)
Query: 10 LNKIYRSS-TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
L +++ SS T+ WN IR +V L L+RRM++ P++ TFPF+ KAC ++
Sbjct: 100 LRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIP 159
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVASWNA 125
F +H + S F ++FV +V MY +C + A ++FD+M +R D+ SWN+
Sbjct: 160 SFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNS 219
Query: 126 MIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
++ + Q G + + +F M +GI+ D V+++ + A S K VH + +
Sbjct: 220 IVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS 279
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL- 243
G+ DV V N + YAKC ++ A VF ++ ++ VVSWN+++ G + +FDD+L
Sbjct: 280 GLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK--VKDVVSWNAMVTGYSQIGRFDDALG 337
Query: 244 ----------------------------------NFYRHMIYDGFRPDVTTVVSLLSSCV 269
+ +R M+ G P+V T+VSLLS C
Sbjct: 338 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCA 397
Query: 270 CPEALVQGRLVHSHGIHYGFDLD-------VSVINTLISMYSKCGDIDSARFLFDGMC-- 320
L+ G+ H H I + +LD + VIN LI MYSKC +AR +FD +
Sbjct: 398 SAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPK 457
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--VPDLVTVLSMISGCGQSGALELG 378
DR+ V+WT +I G AQ G+ +EAL LF M +P+ T+ + C + GAL G
Sbjct: 458 DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFG 517
Query: 379 KWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
+ Y + ++ V N LIDMYSK G + AR +F + ++ VSWT+++ G +
Sbjct: 518 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 577
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL +F++M ++ L P+ VTF+ VL AC+H+G +++G YFN M K + V P
Sbjct: 578 HGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAE 637
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+CM DLL R G+L EA++ ++ MP+K +W LL AC+++ N+E+GEY A +L EL
Sbjct: 638 HYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLEL 697
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
E + Y ++NIYA W VA +R +MK +KK PG S V T TF D
Sbjct: 698 ESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGD 755
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 155/290 (53%), Gaps = 9/290 (3%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
IS Y N A V R + TV WN +I + +D L YR M G+RP
Sbjct: 84 ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRP 143
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T +L +C + G VH+ GF+ +V V N L+SMY +CG ++AR +F
Sbjct: 144 DHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVF 203
Query: 317 DGMCDR---TRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQS 372
D M +R VSW ++++ Y Q GD A+++F M E G PD V++++++ C
Sbjct: 204 DEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV 263
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GA GK YA GL ++V V NA++DMY+KCG + +A ++F + K VVSW M+
Sbjct: 264 GAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 323
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
G + G F +AL LF ++ E + N VT+ AV+ AG+ ++G G+
Sbjct: 324 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVI-----AGYAQRGLGF 368
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/596 (35%), Positives = 327/596 (54%), Gaps = 6/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V ++ + L LF+ M++ I + T+ + ++CA LS +H H +
Sbjct: 226 WSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHAL 285
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA--QMGFLEKV 139
K+ F SD+ V T +DMYAKCD + AYKLF +PD ++ S+NAMI+G+A + GF +
Sbjct: 286 KTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGF--QA 343
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
LF ++ D V++ G AA K S +H I + +++ V N +
Sbjct: 344 FKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDM 403
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC L A +F +E +R VSWN+II C + +L+ + M+ PD
Sbjct: 404 YGKCGALVEASGLFDEME--IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEF 461
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T S+L +C A G VH I G L + V + L+ MYSKCG ++ A + +
Sbjct: 462 TYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRL 521
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++T VSW A+ISG++ + +++ R F M G PD T +++ C + LGK
Sbjct: 522 EEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGK 581
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
L +V + + L+DMYSKCG++ D+ +F P++ V+W MI G A +G
Sbjct: 582 QIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHG 641
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EAL+LF M+ +++PN TF++VL+AC+H G +KG YF M +Y + P+L HY
Sbjct: 642 LGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHY 701
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
SCM D+LGR G+++EAL +Q MP ++DA IW TLL CKI N+E+ E A L +L+P
Sbjct: 702 SCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDP 761
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y ++NIYA G W V+ +R M+ + +KK PG S + + + TF V D
Sbjct: 762 EDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCD 817
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 253/547 (46%), Gaps = 8/547 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N + + WNS I + + K++ +F +M+ + ++ T K C+ L D
Sbjct: 113 FNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLED 172
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ IHG V+ F D+ + +VDMYAKC+ L+ + +F ++PD++ SW+A I G
Sbjct: 173 QVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAG 232
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
Q L + L LF M+ GI T + ++ L +H + +D
Sbjct: 233 CVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSD 292
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + YAKC+++ A +F + + + S+N++I G ++ + + +
Sbjct: 293 VIVGTATLDMYAKCDNMSDAYKLFSLLPD--HNLQSYNAMIIGYARNEQGFQAFKLFLQL 350
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+ F D ++ LS+ + +G +H I ++ V N ++ MY KCG +
Sbjct: 351 QKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGAL 410
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A LFD M R VSW A+I+ Q + L F AM + PD T S++ C
Sbjct: 411 VEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKAC 470
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
A G G+ + V +AL+DMYSKCG + +A ++ Y L E+T+VSW
Sbjct: 471 AGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWN 530
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I+G +L + ++ F M+E+ + P+ T+ VL C + + G M K+
Sbjct: 531 AIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKL 590
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
++ ++ S + D+ + G + ++L + P K D+ W ++C H +GE
Sbjct: 591 -ELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP-KRDSVTWNAMICGFAYHG---LGEE 645
Query: 550 VAYRLFE 556
A LFE
Sbjct: 646 -ALELFE 651
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 202/453 (44%), Gaps = 46/453 (10%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TF I + C+ + H H++ S F +FV ++ MY KC L+ AYK+F++M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 116 PDRDVASWNAM--------------------------------IVGFAQMGFLEKVLCLF 143
P RD+ SWN M I G+ Q G ++K + +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK------SVHSFGIHIGVDADVSVCNTWI 197
MR +G+ D T+ A+ K SLL+ +H + +G D DV + +
Sbjct: 146 LKMRDLGVMFDHTTL------AVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALV 199
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKCN L+ + VF + + + +SW++ I GC D+ L ++ M G
Sbjct: 200 DMYAKCNSLEDSLDVFSELPD--KNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVS 257
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+T S+ SC A G +H H + F DV V + MY+KC ++ A LF
Sbjct: 258 QSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFS 317
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ D S+ AMI GYA+ +A +LF ++ D V++ +S
Sbjct: 318 LLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSE 377
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G A L N+ V NA++DMY KCG++ +A LF + + VSW +I C
Sbjct: 378 GLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQ 437
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
N + L F M+ + P+ T+ +VL+AC
Sbjct: 438 NESEGKTLSHFGAMLRSKMEPDEFTYGSVLKAC 470
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 210/449 (46%), Gaps = 4/449 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+L + + +N+ I + +A LF +++KN + ++ A A +
Sbjct: 314 KLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIK 373
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+HG +KS S+I V ++DMY KC L A LFD+M RD SWNA+I
Sbjct: 374 GHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIIT 433
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
Q K L F M ++ D T + +A + S VH I G+
Sbjct: 434 ACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGL 493
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + + Y+KC ++ AE + +EE +T+VSWN+II G + K +DS F+ H
Sbjct: 494 KMFVGSALVDMYSKCGMMEEAEKIHYRLEE--QTMVSWNAIISGFSLQKKSEDSQRFFSH 551
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ G PD T ++L +C + G+ +H+ I DV + +TL+ MYSKCG+
Sbjct: 552 MLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGN 611
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ + +F R V+W AMI G+A G +EAL LF M P+ T +S++
Sbjct: 612 MHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRA 671
Query: 369 CGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVV 426
C G + G +F A L+ + + ++D+ + G + +A L +P E +
Sbjct: 672 CSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAI 731
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELD 455
W T+++ C + G A +++LD
Sbjct: 732 IWRTLLSICKIQGNVEVAEKAASSLLKLD 760
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 157/355 (44%), Gaps = 11/355 (3%)
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
D+ NT + A +++A+ VF + VVSWNS+I G S+ +
Sbjct: 89 DIVSWNTMVFGCAGAGRMELAQAVFNSMPHH-GDVVSWNSLISGYLQNGDIQKSIAVFLK 147
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G D TT+ L C E V G +H + GFD DV + L+ MY+KC
Sbjct: 148 MRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNS 207
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
++ + +F + D+ +SW+A I+G Q L L+LF M+ G T S+
Sbjct: 208 LEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRS 267
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C A LG +A +V+V A +DMY+KC ++ DA +LF LP+ + S+
Sbjct: 268 CAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSY 327
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI G A N + +A LF Q+ + + V+ L A +G L K
Sbjct: 328 NAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIK 387
Query: 489 VYQVNPELNHYSCMA----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
L+ C+A D+ G+ G L EA M I+ D W ++ AC+
Sbjct: 388 -----SNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR-DPVSWNAIITACE 436
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/634 (34%), Positives = 340/634 (53%), Gaps = 41/634 (6%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
+R + WN+ I + +AL+L+ RM + +++TF + AC+ L+
Sbjct: 70 WRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---G 126
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH + S S + +V MYA+ + A ++F + RD SWNA+I+ +Q
Sbjct: 127 REIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQS 186
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G L +F M+ ++ + T + + + L + +H+ + G D+D+ V
Sbjct: 187 GDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVA 245
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
I+ Y KC A VF +++ R +VSWN +IG F ++L Y+ + +G
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKK--RDMVSWNVMIGCYVQNGDFHEALELYQKLDMEG 303
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F+ T VS+L +C +AL QGRLVHSH + G D +V+V L++MY+KCG ++ AR
Sbjct: 304 FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEAR 363
Query: 314 FLFDGMCDRTRVSWT----------------------------------AMISGYAQKGD 339
+F+ M +R V+W+ AMI+ Y Q G
Sbjct: 364 KVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGC 423
Query: 340 LDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
A+++F M AAG PD VT ++++ C G L K L+ NV+V N
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTN 483
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
LI+MY++CGS+ +A LF A EKTVVSWT M+A + G + EALDLF +M ++P
Sbjct: 484 TLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKP 543
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ VT+ ++L CTH G LE+GW YF M +++ + P +H++ M DLLGR G+L +A +
Sbjct: 544 DDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKEL 603
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
++SMP + D W T L AC+IH +E+GE A R++EL+P S APY+ M+NIYA G W
Sbjct: 604 LESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMW 663
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+ VA++R M+ +KK PG S + ++GK F+
Sbjct: 664 EKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFS 697
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 175/605 (28%), Positives = 276/605 (45%), Gaps = 86/605 (14%)
Query: 49 DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
D +P+N+TF + +C+ D + +H I S F D V ++ MY KCD L A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 109 YKLFDKMP--DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAI 166
+F+ M R+V SWNAMI +AQ G + L L++ M L G+ D VT + + A
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC- 120
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
L+ + +H+ + G+D+ S+ N ++ YA+ + A+ +F+ ++ R SW
Sbjct: 121 --SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ--TRDETSW 176
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N++I + + +L ++ M D +P+ TT ++++S PE L +GR +H+ +
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
GFD D+ V LI+MY KCG AR +FD M R VSW MI Y Q GD EAL L
Sbjct: 236 NGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALEL 295
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
+ ++ G T +S++ C AL G+ ++ GL V V AL++MY+K
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAK 355
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGE-------------------------- 440
CGS+ +AR++F A+ + V+W+T+I A NG
Sbjct: 356 CGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMI 415
Query: 441 --------FVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYF------NL 485
V A+ +F +M L+P+ VTF+AVL+AC G L + L
Sbjct: 416 TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL 475
Query: 486 MTKVYQVNPELNHY------------------------SCMADLLGRKGKLKEALDFVQS 521
+ V N +N Y + M + G+ EALD Q
Sbjct: 476 ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQE 535
Query: 522 MP---IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE--LEPHSAAP----YVEMANIY 572
M +K D + ++L C ++E G +R F E H AP + M ++
Sbjct: 536 MDLEGVKPDDVTYTSILFVCTHGGSLEQG----WRYFTDMAELHGLAPTADHFAAMVDLL 591
Query: 573 ALGGR 577
GR
Sbjct: 592 GRSGR 596
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/598 (35%), Positives = 326/598 (54%), Gaps = 9/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA----KACAKLSDFLYSQMIH 77
W + I V+ N++ +ALLLF+ M+ +E PFI KAC SD Y +++H
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMR---VESGLRIDPFILSLAHKACGLNSDVNYGELLH 139
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ VK+ + +FV + ++DMY K ++ ++F +MP R+V SW A+I G + G+ +
Sbjct: 140 GYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNK 199
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F M ++ D T +A + L+ + +H+ + G D V NT
Sbjct: 200 EALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLA 259
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y KC L+ +F + +R VVSW +II + + ++ + M P+
Sbjct: 260 TMYNKCGKLEYGLTLFEKM--SMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPN 317
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T +++S C + G +H+ +H G +SV N++++MY+KCG + S+ +F
Sbjct: 318 EYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M R VSW+ +I+GY+Q G + EA L M G P + S++S CG LE
Sbjct: 378 EMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEH 437
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK Y S GL+ MV +ALI+MY KCGSI +A +F A +VSWT MI G A
Sbjct: 438 GKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAE 497
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G E +DLF ++ + LRP+ VTF+ VL AC+HAG ++ G+ YFN M+K YQ++P
Sbjct: 498 HGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKE 557
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY CM DLL R G+L +A +++MP D +W TLL AC++H ++E G A R+ +L
Sbjct: 558 HYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQL 617
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP+ A ++ +ANIYA G+W A++R +MK V K PG S + + F D
Sbjct: 618 EPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGD 675
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 184/381 (48%), Gaps = 5/381 (1%)
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL-VGIQAD-FVTV 158
K L A ++FDKM +D SW +I G+ + L LF NMR+ G++ D F+
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ +++ ++ + +H + + G+ V V + + Y K + VF E
Sbjct: 121 LAHKACGLNSD-VNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFH--EM 177
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
+R VVSW +II G ++L ++ M D T L +C AL GR
Sbjct: 178 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H+ + GFD+ V NTL +MY+KCG ++ LF+ M R VSWT +I+ Q G
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ A++ F M + P+ T ++ISGC +E G+ GL ++ V N
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+++ MY+KCG + + +F+ + + +VSW+T+IAG + G EA +L M +P
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKP 417
Query: 459 NRVTFLAVLQACTHAGFLEKG 479
+VL AC + LE G
Sbjct: 418 TEFALASVLSACGNMAILEHG 438
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 5/272 (1%)
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
+ C+ + L + S IH+ D+ N + K G + +AR +FD M + +
Sbjct: 22 TECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEI 81
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI-SGCGQSGALELGKWFDNY 384
SWT +ISGY D EAL LF M + +LS+ CG + + G+ Y
Sbjct: 82 SWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGY 141
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A GL ++V V +AL+DMY+K G I + R +F+ +P + VVSWT +I G G EA
Sbjct: 142 AVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEA 201
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMA 503
L F +M + + TF L+AC +G L G + M K + V+ + + +A
Sbjct: 202 LVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVAN--TLA 259
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + GKL+ L + M ++ D W T++
Sbjct: 260 TMYNKCGKLEYGLTLFEKMSMR-DVVSWTTII 290
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W++ I +A L M+ +P + AC ++ + + +H
Sbjct: 384 IVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHA 443
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ V + +++MY KC ++ A ++FD + D+ SW AMI G+A+ G+ +
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSRE 503
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
V+ LF + VG++ D VT +G+ A HA
Sbjct: 504 VIDLFEKIPRVGLRPDSVTFIGVLSACSHA 533
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/594 (34%), Positives = 322/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V + A +F M++ + PN++TF + CA + +HG +V
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVV 275
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S D V T++ MYAKC L A +LFD MP D+ +WN MI G+ Q GF+++ C
Sbjct: 276 SSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASC 335
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ M ++ D +T L K +H + I GV DV + + I Y
Sbjct: 336 LFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYF 395
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++MA +F + +V ++I G +++L +R ++ + R + T+
Sbjct: 396 KCRDVEMARKIFD--QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C AL G+ +H H + G V + ++ MY+KCG +D A F G+ D
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 513
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W +MI+ +Q G +EA+ LF M AG D V++ + +S C AL GK
Sbjct: 514 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 573
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G + ++ +ALIDMYSKCG++ A +F + EK VSW ++IA +G
Sbjct: 574 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRL 633
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
++L+LFH M+ ++P+ VTFLA++ AC HAG +++G YF MT+ + + HY+C
Sbjct: 634 KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC 693
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL GR G+L EA + SMP DAG+WGTLL AC++H N+E+ E + LF+L+P +
Sbjct: 694 MVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQN 753
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++N++A G+W+ V +R++MK V+K PG S + +N T F D
Sbjct: 754 SGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAAD 807
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 243/524 (46%), Gaps = 4/524 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + ALL + +M P+ TFP++ KAC L+ +++H I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F D+FV ++++ Y++ + A LFD+MP +D WN M+ G+ + G +
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR + VT + ++ +H + G++ D V NT ++ YA
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYA 294
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A +F + + +V+WN +I G D++ + MI +PD T
Sbjct: 295 KCGHLFDARRLFDMMPK--TDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITF 352
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L L QG+ +H + I G LDV + + LI +Y KC D++ AR +FD
Sbjct: 353 SSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTP 412
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V TAMISGY G + AL +F + + VT+ S++ C AL LGK
Sbjct: 413 VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKEL 472
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G + V +A++DMY+KCG + A + F + +K V W +MI C+ NG+
Sbjct: 473 HGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKP 532
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA+DLF QM + + V+ A L AC + L G M + +L S
Sbjct: 533 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESA 591
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ D+ + G L A +M K++ W +++ A H ++
Sbjct: 592 LIDMYSKCGNLDLACRVFDTMEEKNEVS-WNSIIAAYGNHGRLK 634
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 227/461 (49%), Gaps = 6/461 (1%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + + + WN I V +A LF M ++P+++TF ++ +
Sbjct: 304 RLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGA 363
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IH +I+++ D+F+++ ++D+Y KC ++ A K+FD+ D+ AMI
Sbjct: 364 TLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMIS 423
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+ G L +F + ++A+ VT+ + A L+L K +H + G
Sbjct: 424 GYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGG 483
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
V + + YAKC L +A F GI + + V WNS+I C+ K +++++ +R
Sbjct: 484 SCYVGSAIMDMYAKCGRLDLAHQTFIGISD--KDAVCWNSMITSCSQNGKPEEAIDLFRQ 541
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G + D ++ + LS+C AL G+ +H+ + F D+ + LI MYSKCG+
Sbjct: 542 MGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGN 601
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+D A +FD M ++ VSW ++I+ Y G L ++L LF M G PD VT L++IS
Sbjct: 602 LDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISA 661
Query: 369 CGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVV 426
CG +G ++ G +F G+ + ++D++ + G + +A + ++P
Sbjct: 662 CGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAG 721
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
W T++ C L+G VE ++ + + DL P + +L
Sbjct: 722 VWGTLLGACRLHGN-VELAEVASRNL-FDLDPQNSGYYVLL 760
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 192/420 (45%), Gaps = 2/420 (0%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
I + C S + H ++ + + + T ++ MY C A +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
WN MI GF MG + L ++ M G D T + +A ++L + VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+G + DV V ++ I Y++ + A +F + + V WN ++ G +
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPS--KDGVLWNVMLNGYVKNGDW 229
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D++ + M P+ T +LS C + G +H + G ++D V NTL
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTL 289
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
++MY+KCG + AR LFD M V+W MISGY Q G +DEA LF M +A PD
Sbjct: 290 LAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDS 349
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+T S + + L GK Y G+ +V + +ALID+Y KC + AR++F
Sbjct: 350 ITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQ 409
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+V T MI+G LNG AL++F +++ +R N VT +VL AC L G
Sbjct: 410 RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLG 469
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/658 (34%), Positives = 350/658 (53%), Gaps = 54/658 (8%)
Query: 10 LNKIYRSS-TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
L +++ SS T+ WN IR +V L L+RRM++ P++ TFPF+ KAC ++
Sbjct: 81 LRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIP 140
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVASWNA 125
F +H + S F ++FV +V MY +C + A ++FD+M +R D+ SWN+
Sbjct: 141 SFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNS 200
Query: 126 MIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
++ + Q G + + +F M +GI+ D V+++ + A S K VH + +
Sbjct: 201 IVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS 260
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL- 243
G+ DV V N + YAKC ++ A VF ++ ++ VVSWN+++ G + +FDD+L
Sbjct: 261 GLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK--VKDVVSWNAMVTGYSQIGRFDDALG 318
Query: 244 ----------------------------------NFYRHMIYDGFRPDVTTVVSLLSSCV 269
+ +R M G P+V T+VSLLS C
Sbjct: 319 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCA 378
Query: 270 CPEALVQGRLVHSHGIHYGFDLD-------VSVINTLISMYSKCGDIDSARFLFDGMC-- 320
L+ G+ H H I + +LD + VIN LI MYSKC +AR +FD +
Sbjct: 379 LAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPK 438
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--VPDLVTVLSMISGCGQSGALELG 378
DR+ V+WT +I G AQ G+ +EAL LF M +P+ T+ + C + GAL G
Sbjct: 439 DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFG 498
Query: 379 KWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
+ Y + ++ V N LIDMYSK G + AR +F + ++ VSWT+++ G +
Sbjct: 499 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 558
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL +F++M ++ L P+ VTF+ VL AC+H+G +++G YFN M K + V P
Sbjct: 559 HGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAE 618
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+CM DLL R G+L EA++ ++ MP+K +W LL AC+++ N+E+GEY A +L EL
Sbjct: 619 HYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLEL 678
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
E + Y ++NIYA W VA +R +MK +KK PG S V T TF D
Sbjct: 679 ESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGD 736
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 155/290 (53%), Gaps = 9/290 (3%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
IS Y N A V R + TV WN +I + +D L YR M G+RP
Sbjct: 65 ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRP 124
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T +L +C + G VH+ GF+ +V V N L+SMY +CG ++AR +F
Sbjct: 125 DHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVF 184
Query: 317 DGMCDR---TRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQS 372
D M +R VSW ++++ Y Q GD A+++F M E G PD V++++++ C
Sbjct: 185 DEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV 244
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GA GK YA GL ++V V NA++DMY+KCG + +A ++F + K VVSW M+
Sbjct: 245 GAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 304
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
G + G F +AL LF ++ E + N VT+ AV+ AG+ ++G G+
Sbjct: 305 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVI-----AGYAQRGLGF 349
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/598 (35%), Positives = 325/598 (54%), Gaps = 9/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA----KACAKLSDFLYSQMIH 77
W + I V+ N++ +ALLLF+ M+ +E PFI KAC SD Y +++H
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMR---VESGLRIDPFILSLAHKACGLNSDVNYGELLH 139
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ VK+ + +FV + ++DMY K ++ ++F +MP R+V SW A+I G + G+ +
Sbjct: 140 GYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNK 199
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F M ++ D T +A + L+ + +H+ + G D V NT
Sbjct: 200 EALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLA 259
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y KC L+ +F + +R VVSW +II + + ++ + M P+
Sbjct: 260 TMYNKCGKLEYGLTLFEKM--SMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPN 317
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T +++S C + G +H+ +H G +SV N++++MY+KCG + S+ +F
Sbjct: 318 EYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M R VSW+ +I+GY Q G + EA L M G P + S++S CG LE
Sbjct: 378 EMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEH 437
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK Y S GL+ MV +ALI+MY KCGSI +A +F A +VSWT MI G A
Sbjct: 438 GKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAE 497
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G E +DLF ++ + LRP+ VTF+ VL AC+HAG ++ G+ YFN M+K YQ++P
Sbjct: 498 HGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKE 557
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY CM DLL R G+L +A +++MP D +W TLL AC++H ++E G A R+ +L
Sbjct: 558 HYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQL 617
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP+ A ++ +ANIYA G+W A++R +MK V K PG S + + F D
Sbjct: 618 EPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGD 675
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 183/381 (48%), Gaps = 5/381 (1%)
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL-VGIQAD-FVTV 158
K L A ++FDKM +D SW +I G+ + L LF NMR+ G++ D F+
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ +++ ++ + +H + + G+ V V + + Y K + VF E
Sbjct: 121 LAHKACGLNSD-VNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFH--EM 177
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
+R VVSW +II G ++L ++ M D T L +C AL GR
Sbjct: 178 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H+ + GFD+ V NTL +MY+KCG ++ LF+ M R VSWT +I+ Q G
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ A++ F M + P+ T ++ISGC +E G+ GL ++ V N
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+++ MY+KCG + + +F+ + + +VSW+T+IAG G EA +L M +P
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKP 417
Query: 459 NRVTFLAVLQACTHAGFLEKG 479
+VL AC + LE G
Sbjct: 418 TEFALASVLSACGNMAILEHG 438
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 5/272 (1%)
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
+ C+ + L + S IH+ D+ N + K G + +AR +FD M + +
Sbjct: 22 TECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEI 81
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI-SGCGQSGALELGKWFDNY 384
SWT +ISGY D EAL LF M + +LS+ CG + + G+ Y
Sbjct: 82 SWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGY 141
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A GL ++V V +AL+DMY+K G I + R +F+ +P + VVSWT +I G G EA
Sbjct: 142 AVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEA 201
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMA 503
L F +M + + TF L+AC +G L G + M K + V+ + + +A
Sbjct: 202 LVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVAN--TLA 259
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + GKL+ L + M ++ D W T++
Sbjct: 260 TMYNKCGKLEYGLTLFEKMSMR-DVVSWTTII 290
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W++ I +A L M+ +P + AC ++ + + +H
Sbjct: 384 IVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHA 443
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ V + +++MY KC ++ A ++FD + D+ SW AMI G+A+ G+ +
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSRE 503
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
V+ LF + VG++ D VT +G+ A HA
Sbjct: 504 VIDLFEKIPRVGLRPDSVTFIGVLSACSHA 533
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/617 (35%), Positives = 333/617 (53%), Gaps = 21/617 (3%)
Query: 16 SSTINQWNSQIR--EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
S + +N IR + A L L+RRM ++ + PNN TFPF KAC+ L+D
Sbjct: 85 SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCG 144
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH H + + +D+FV T ++DMY KC L A +F MP RD+ +WNAM+ G+A
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 134 GFLEKVLC--LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-- 189
G + L M++ ++ + T++ L L+ SVH++ I + ++
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRN 264
Query: 190 --------VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
V + + YAKC L A VF + R V+W+++IGG +
Sbjct: 265 SKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA--RNEVTWSALIGGFVLCSRMTQ 322
Query: 242 SLNFYRHMIYDGF---RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+ ++ M+ G P T++ S L +C + L G +H+ G D++ N+
Sbjct: 323 AFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 380
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+SMY+K G ID A LFD M + VS++A++SGY Q G +EA +F M+A PD
Sbjct: 381 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 440
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
T++S+I C AL+ G+ GL +CNALIDMY+KCG I +R++F
Sbjct: 441 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN 500
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+P + +VSW TMIAG ++G EA LF +M L P+ VTF+ +L AC+H+G + +
Sbjct: 501 MMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 560
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G +F++M Y + P + HY CM DLL R G L EA +F+QSMP+++D +W LL AC
Sbjct: 561 GKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGAC 620
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
++++NI++G+ V+ + EL P +V ++NIY+ GR+D A +R + K KK PG
Sbjct: 621 RVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPG 680
Query: 599 QSLVHINGKTCTFTVED 615
S + ING F D
Sbjct: 681 CSWIEINGSLHAFVGGD 697
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/594 (34%), Positives = 326/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS I + + KAL LF++M + ++P+ +T + AC+ + L + H + +
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ SDI ++ ++D+Y KC + A++ F +V WN M+V + + L +
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFK 459
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M++ GI+ + T + + + + L + +H+ + G +V V + I YA
Sbjct: 460 IFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 519
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A +FR ++E + VVSW ++I G +KF ++LN ++ M G D
Sbjct: 520 KLGKLDHALKIFRRLKE--KDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGF 577
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +S+C +AL QG+ +H+ G+ D+SV N L+S+Y++CG + A F FD +
Sbjct: 578 ASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFS 637
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SW ++ISG+AQ G +EAL LF M AG+ + T +S ++LGK
Sbjct: 638 KDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQI 697
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G V N LI +Y+KCG+I DA F+ +PEK +SW M+ G + +G
Sbjct: 698 HAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHG 757
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL LF M +L + PN VTF+ VL AC+H G +++G YF M +V+ + P+ HY+C
Sbjct: 758 FKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYAC 817
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G L A FV+ MPI+ DA + TLL AC +H+NI+IGE+ A L ELEP
Sbjct: 818 VVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKD 877
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++N+YA+ G+W R MMK VKK PG+S + +N F D
Sbjct: 878 SATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGD 931
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 248/515 (48%), Gaps = 5/515 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS-DFLYSQMIHGHI 80
WN + V A + L LFRRM + ++P+ T+ + + C F + IH
Sbjct: 137 WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHART 196
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ + + +FV ++D+Y K L+ A K+FD + RD SW AM+ G +Q G E+ +
Sbjct: 197 ITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAV 256
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M G+ + A + + + +H + G + VCN ++ Y
Sbjct: 257 LLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLY 316
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++ + AE VF + + R VS+NS+I G + D +L ++ M D +PD T
Sbjct: 317 SRLGNFIPAEQVFNAMLQ--RDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVT 374
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V SLLS+C AL+ G+ HS+ I G D+ + L+ +Y KC DI +A F
Sbjct: 375 VASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTE 434
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
V W M+ Y +L+E+ ++F M+ G P+ T S++ C A++LG+
Sbjct: 435 TENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQ 494
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G + NV V + LIDMY+K G + A ++F L EK VVSWT MIAG A + +
Sbjct: 495 IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEK 554
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
F EAL+LF +M + + + + F + + AC L +G + V + +L+ +
Sbjct: 555 FAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQ-QIHAQACVSGYSDDLSVGN 613
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ L R GK+++A F D W +L+
Sbjct: 614 ALVSLYARCGKVRDAY-FAFDKIFSKDNISWNSLI 647
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 249/515 (48%), Gaps = 10/515 (1%)
Query: 31 DKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
D+ EA+ + M++ + N+ T+ ++ C F +HG I+K F +++
Sbjct: 46 DEGEAN-GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVV 104
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+ ++D+Y LD A +FD+MP R ++ WN ++ F +VL LF M
Sbjct: 105 LCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEK 164
Query: 151 IQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
++ D T G+ + ++ +H+ I G + + VCN I Y K L A
Sbjct: 165 VKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSA 224
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+ VF G+++ R VSW +++ G + ++++ + M G P S+LS+C
Sbjct: 225 KKVFDGLQK--RDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACT 282
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
E G +H + GF L+ V N L+++YS+ G+ A +F+ M R VS+ +
Sbjct: 283 KVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNS 342
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+ISG +Q+G D+AL LF M PD VTV S++S C GAL +GK F +YA G
Sbjct: 343 LISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAG 402
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ ++++ AL+D+Y KC I A E F + + VV W M+ L E+ +F
Sbjct: 403 MSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFT 462
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLG 507
QM + PN+ T+ ++L+ C+ ++ G + T+V + + N Y S + D+
Sbjct: 463 QMQMEGIEPNQFTYPSILRTCSSLRAVDLGE---QIHTQVLKTGFQFNVYVSSVLIDMYA 519
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
+ GKL AL + + K D W ++ H
Sbjct: 520 KLGKLDHALKIFRRLKEK-DVVSWTAMIAGYAQHE 553
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 5/260 (1%)
Query: 12 KIYR---SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
KI+R + W + I + +AL LF+ M+ I +N+ F ACA +
Sbjct: 529 KIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQ 588
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
Q IH S + D+ V +V +YA+C ++ AY FDK+ +D SWN++I
Sbjct: 589 ALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLIS 648
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GFAQ G E+ L LF M G + + T AA + ++ L K +H+ I G D+
Sbjct: 649 GFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDS 708
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V N I+ YAKC ++ AE F + E + +SWN+++ G + +L+ +
Sbjct: 709 ETEVSNVLITLYAKCGNIDDAERQFFEMPE--KNEISWNAMLTGYSQHGHGFKALSLFED 766
Query: 249 MIYDGFRPDVTTVVSLLSSC 268
M G P+ T V +LS+C
Sbjct: 767 MKQLGVLPNHVTFVGVLSAC 786
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Query: 334 YAQKGDLDEA--LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
YA D EA + ME G + T L ++ GC SG G G
Sbjct: 41 YAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFC 100
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
V++C L+D+Y G + A +F +P + + W ++ L LF +M
Sbjct: 101 AEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRM 160
Query: 452 MELDLRPNRVTFLAVLQAC 470
++ ++P+ T+ VL+ C
Sbjct: 161 LQEKVKPDERTYAGVLRGC 179
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 319/578 (55%), Gaps = 2/578 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL +F M+ + + P+ +T + ACA + D + +H +++K+ D + +++D
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+Y KC ++ A+ +F+ +V WN M+V + Q+ L K +F M+ GI + T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + + L + +HS I G ++D+ V I Y+K L A + +E
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ R VVSW S+I G D +++L ++ M G PD + S S+C +A+ QG
Sbjct: 409 K--RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H+ G+ D+S+ NTL+++Y++CG + A LF + + ++W +ISG+ Q
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQS 526
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
++AL +F M AG ++ T +S IS ++ GK A G V
Sbjct: 527 RLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVA 586
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NALI +Y KCGSI DA+ +F + + VSW T+I C+ +G +EALDLF QM + L+
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VTF+ VL AC+H G +E+G YF M+ VY +NP +HY+C+ D+LGR G+L A
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARR 706
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
FV MPI ++A IW TLL ACK+H+NIEIGE A L ELEPH +A YV ++N YA+ G+
Sbjct: 707 FVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGK 766
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W +R MMK ++K PG+S + + F V D
Sbjct: 767 WANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGD 804
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 145/528 (27%), Positives = 241/528 (45%), Gaps = 11/528 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + + +A L+ +M + P + AC K F +MIH +
Sbjct: 112 WVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVY 171
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S+ FV ++ +Y A ++F M D ++N +I G AQ G E L
Sbjct: 172 KQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQ 231
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+L G++ D VTV L A L K +HS+ + G+ D + + Y
Sbjct: 232 IFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYV 291
Query: 202 KCNDLKMAELVFRGIEEGLRT-VVSWNSIIGGCTYGDKFD--DSLNFYRHMIYDGFRPDV 258
KC D++ A +F G RT VV WN ++ YG D S + M G P+
Sbjct: 292 KCGDIETAHDIF---NLGDRTNVVLWNLML--VAYGQISDLAKSFEIFGQMQATGIHPNK 346
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +L +C C + G +HS I GF+ D+ V LI MYSK +D AR + +
Sbjct: 347 FTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEM 406
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ R VSWT+MI+GY Q +EAL F M+ G PD + + S S C A+ G
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
G ++ + N L+++Y++CG +A LF + K ++W +I+G +
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQS 526
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
+ +AL +F +M + + N TF++ + A + +++G K + E
Sbjct: 527 RLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTS-ETEV 585
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIE 545
+ + L G+ G +++A M ++++ W T++ +C H R +E
Sbjct: 586 ANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGRGLE 632
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 215/440 (48%), Gaps = 6/440 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + ++ K+ +F +M+ I PN T+P I + C + IH +
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSI 373
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F SD++V ++DMY+K LD A K+ + + RDV SW +MI G+ Q F E+ L
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ G+ D + + A K + +H+ G AD+S+ NT ++ YA
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYA 493
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C + A +FR I+ + ++WN +I G ++ +L + M G + +V T
Sbjct: 494 RCGRSEEAFSLFREIDH--KDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTF 551
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S +S+ + QG+ VH + G + V N LIS+Y KCG I+ A+ +F M
Sbjct: 552 ISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL 611
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
R VSW +I+ +Q G EAL LF M+ G P+ VT + +++ C G +E G +
Sbjct: 612 RNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSY 671
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
F + + GL ++D+ + G + AR +P + W T+++ C ++
Sbjct: 672 FKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHK 731
Query: 440 EFVEALDLFHQMMELDLRPN 459
+E +L + + L+L P+
Sbjct: 732 N-IEIGELAAKHL-LELEPH 749
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 241/521 (46%), Gaps = 18/521 (3%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH V +D + ++D+YAK + A ++F ++ RD SW AM+ G+AQ G
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGL 124
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ L+ M + + + A K + + +H+ ++ V N
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y K+AE VF + R V++N++I G + +L + M G R
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDR--VTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD TV SLL++C L +G+ +HS+ + G D +L+ +Y KCGDI++A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 316 FDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F+ + DRT V W M+ Y Q DL ++ +F M+A G P+ T ++ C +G
Sbjct: 303 FN-LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQ 361
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ELG+ + + G + ++ V LIDMYSK + AR++ L ++ VVSWT+MIAG
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAG 421
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN- 493
+ EAL F +M + + P+ + + AC + +G + +VY
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG---LQIHARVYVSGY 478
Query: 494 -PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+++ ++ + +L R G+ +EA + + K D W L+ R E A
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISGFGQSRLYE----QAL 533
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
+F + A Y N++ +ANL + + QV
Sbjct: 534 MVFMKMSQAGAKY----NVFTFISAISALANLADIKQGKQV 570
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 153/316 (48%), Gaps = 2/316 (0%)
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L+ +H+ + G+ AD + N I YAK + A VF+ E R VSW +++ G
Sbjct: 61 LVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFK--ELSSRDHVSWVAMLSG 118
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
++ Y M + P + S+LS+C + QGR++H+ F +
Sbjct: 119 YAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSE 178
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
V N LI++Y G A +F M RV++ +ISG+AQ G + AL++F M+
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
+G PD VTV S+++ C G L+ GK +Y G+ + + +L+D+Y KCG I
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A ++F VV W M+ + ++ ++F QM + PN+ T+ +L+ CT
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTC 358
Query: 473 AGFLEKGWGYFNLMTK 488
G +E G +L K
Sbjct: 359 TGQIELGEQIHSLSIK 374
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/612 (34%), Positives = 327/612 (53%), Gaps = 6/612 (0%)
Query: 8 PRLNKIY---RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
PR +++ + +N+ + K + L LF +M I P+ +T+ + A
Sbjct: 180 PRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
S + IH V+ SDI V T +V M +C +D A + F + DRDV +N
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYN 299
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
A+I AQ G + +Y MR G+ + T + + A +K L K +HS
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G +DV + N IS YA+C DL A +F + + R ++SWN+II G + +++
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPK--RDLISWNAIIAGYARREDRGEAMR 417
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
Y+ M +G +P T + LLS+C A G+++H + G + + N L++MY
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
+CG + A+ +F+G R +SW +MI+G+AQ G + A +LF M+ PD +T S
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++SGC ALELGK GL+ +V + NALI+MY +CGS+ DAR +F++L +
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRD 597
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLR-PNRVTFLAVLQACTHAGFLEKGWGYF 483
V+SWT MI GCA GE ++A++LF QM R P+ TF ++L AC HAG + +G+ F
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIF 657
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
+ M Y V P + HY C+ LLGR + +EA + MP DA +W TLL AC+IH N
Sbjct: 658 SSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 717
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
I + E+ A +L + A Y+ ++N+YA GRWD VA +R +M+ ++K PG+S +
Sbjct: 718 IALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIE 777
Query: 604 INGKTCTFTVED 615
++ F D
Sbjct: 778 VDNIIHEFIAAD 789
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 273/518 (52%), Gaps = 6/518 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + KA LF M+ PN +T+ I AC ++ + IH I+
Sbjct: 96 WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQII 155
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ + D VQ +++ MY KC L A ++F + RDV S+N M+ +AQ ++++ L
Sbjct: 156 KAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLG 215
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI D VT + L A L K +H + G+++D+ V ++
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C D+ A+ F+GI + R VV +N++I +G + +YR M DG + TT
Sbjct: 276 RCGDVDSAKQAFKGIAD--RDVVVYNALIAALAQHGHNVEAFEQYYR-MRSDGVALNRTT 332
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+S+L++C +AL G+L+HSH G DV + N LISMY++CGD+ AR LF M
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP 392
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R +SW A+I+GYA++ D EA+RL+ M++ G P VT L ++S C S A GK
Sbjct: 393 KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKM 452
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G+K N + NAL++MY +CGS+ +A+ +F + V+SW +MIAG A +G
Sbjct: 453 IHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+ A LF +M +L P+ +TF +VL C + LE G +T+ + ++N +
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGN 571
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ ++ R G L++A + S+ + D W ++ C
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC 608
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 266/516 (51%), Gaps = 16/516 (3%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
E + T+ + + C + ++ IH +V++ DIF+ +++MY KC + A++
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+F +MP RDV SWN++I +AQ GF +K LF M+ G + +T + + A
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L K +HS I G D V N+ +S Y KC DL A VF GI R VVS+N+++
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP--RDVVSYNTML 201
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + L + M +G PD T ++LL + P L +G+ +H + G +
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+ V L++M +CGD+DSA+ F G+ DR V + A+I+ AQ G EA ++ M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G + T LS+++ C S ALE GK ++ G +V + NALI MY++CG +
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
ARELFY +P++ ++SW +IAG A + EA+ L+ QM ++P RVTFL +L AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 471 THAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
++ G + +++ + N L + + ++ R G L EA + + + D
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHL--ANALMNMYRRCGSLMEAQNVFEGTQAR-DVI 498
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLF------ELEP 559
W +++ H + E AY+LF ELEP
Sbjct: 499 SWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEP 530
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/617 (35%), Positives = 332/617 (53%), Gaps = 21/617 (3%)
Query: 16 SSTINQWNSQIR--EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
S + +N IR + A L L+RRM ++ + PNN TFPF KAC+ L+D
Sbjct: 85 SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCG 144
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH H + + +D+FV T ++DMY KC L A +F MP RD+ +WNAM+ G+A
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 134 GFLEKVLC--LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-- 189
G + L M++ ++ + T++ L L+ SVH++ I + +
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRN 264
Query: 190 --------VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
V + + YAKC L A VF + R V+W+++IGG +
Sbjct: 265 SKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA--RNEVTWSALIGGFVLCSRMTQ 322
Query: 242 SLNFYRHMIYDGF---RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+ ++ M+ G P T++ S L +C + L G +H+ G D++ N+
Sbjct: 323 AFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 380
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+SMY+K G ID A LFD M + VS++A++SGY Q G +EA +F M+A PD
Sbjct: 381 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 440
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
T++S+I C AL+ G+ GL +CNALIDMY+KCG I +R++F
Sbjct: 441 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN 500
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+P + +VSW TMIAG ++G EA LF +M L P+ VTF+ +L AC+H+G + +
Sbjct: 501 MMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 560
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G +F++M Y + P + HY CM DLL R G L EA +F+QSMP+++D +W LL AC
Sbjct: 561 GKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGAC 620
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
++++NI++G+ V+ + EL P +V ++NIY+ GR+D A +R + K KK PG
Sbjct: 621 RVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPG 680
Query: 599 QSLVHINGKTCTFTVED 615
S + ING F D
Sbjct: 681 CSWIEINGSLHAFVGGD 697
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 323/593 (54%), Gaps = 8/593 (1%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
++++R A +++ AL F M + P TF + K CA +D + +H +
Sbjct: 193 HARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLA 252
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ T + +MYAKC R A ++FD+MP RD +WNA++ G+A+ G E +
Sbjct: 253 ARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVG 312
Query: 142 LFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+ M+ G + D VT++ + A A+ L + VH+F + G D V+V + Y
Sbjct: 313 MVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVY 372
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC + A VF G+++ R VSWN++I G ++L ++ M+ +G DVT
Sbjct: 373 CKCGAVDSARKVFDGMQD--RNSVSWNAMIKGYAENGDATEALALFKRMVGEGV--DVTD 428
Query: 261 VVSLLSSCVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
V L + C E L +GR VH + G + +V+V+N LI+MY KC D A +FD
Sbjct: 429 VSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDE 488
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ +TRVSW AMI G Q G ++A+RLF M+ PD T++S+I
Sbjct: 489 LGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQA 548
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+W Y+ L +V V ALIDMY+KCG + AR LF + ++ V++W MI G +
Sbjct: 549 RWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSH 608
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G A++LF +M PN TFL+VL AC+HAG +++G YF+ M + Y + P + H
Sbjct: 609 GSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEH 668
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y M DLLGR GKL EA F+Q MP++ ++G +L ACK+H+N+E+ E A R+FELE
Sbjct: 669 YGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELE 728
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
P +V +ANIYA W VA +RT M++ ++K PG S+V + + TF
Sbjct: 729 PEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTF 781
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 325/594 (54%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + E +++ LF +M++ I ++ TF + K A + + +HG+++
Sbjct: 126 WNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVL 185
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S V +++ Y KC ++ A LFD++ DRDV SWN+MI G GF L
Sbjct: 186 KLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLE 245
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M +G+ D T++ + A + +L+L +++H++G+ G V NT + Y+
Sbjct: 246 FFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYS 305
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L A VF ++ G T+VSW SII +++ + M G RPD+ V
Sbjct: 306 KCGNLNGANEVF--VKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAV 363
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S++ +C C +L +GR VH+H ++ V N L++MY+KCG ++ A +F +
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV 423
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW MI GY+Q +EAL+LF M+ + PD VT+ ++ C ALE G+
Sbjct: 424 KNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLK-PDDVTMACVLPACAGLAALEKGREI 482
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G ++ V AL+DMY KCG + A++LF +P+K ++ WT MIAG ++G
Sbjct: 483 HGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFG 542
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA+ F +M + P +F ++L ACTH+G L++GW F+ M + P+L HY+C
Sbjct: 543 KEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYAC 602
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLL R G L A F+++MPIK DA IWG LL C+IH ++E+ E VA +FELEP +
Sbjct: 603 MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPEN 662
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV +AN+YA +W+ V ++ + + +K G S + + GK F D
Sbjct: 663 TRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGD 716
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 285/545 (52%), Gaps = 13/545 (2%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N++I + + + A+ L R +++++E N T+ + + CA+L + +H I
Sbjct: 28 NAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHSIISS 85
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ D + +V MY C L ++FD + + + WN ++ +A++G + + L
Sbjct: 86 NGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGL 145
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F M+ +GI+ D T + + + + K VH + + +G + +V N+ I+AY K
Sbjct: 146 FEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFK 205
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
C +++ A ++F + + R VVSWNS+I GCT + L F+ M+ G D T+V
Sbjct: 206 CGEVESARILFDELSD--RDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLV 263
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
++L +C L GR +H++G+ GF V NTL+ MYSKCG+++ A +F M +
Sbjct: 264 NVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGET 323
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
T VSWT++I+ + ++G EA+ LF M++ G PD+ V S++ C S +L+ G+
Sbjct: 324 TIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVH 383
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
N+ + N+ V NAL++MY+KCGS+ +A +F LP K +VSW TMI G + N
Sbjct: 384 NHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPN 443
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSC 501
EAL LF M + L+P+ VT VL AC LEKG + +++ K Y + H +C
Sbjct: 444 EALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDL---HVAC 499
Query: 502 -MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH--RNIEIGEYVAYRLFELE 558
+ D+ + G L A +P K D +W ++ +H I + R+ +E
Sbjct: 500 ALVDMYVKCGLLVLAQQLFDMIP-KKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIE 558
Query: 559 PHSAA 563
P ++
Sbjct: 559 PEESS 563
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 155/332 (46%), Gaps = 5/332 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+TI W S I V + ++A+ LF M+ + P+ + ACA + + +
Sbjct: 323 TTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREV 382
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H HI K+ S++ V +++MYAKC ++ A +F ++P +++ SWN MI G++Q
Sbjct: 383 HNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLP 442
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L LF +M+ ++ D VT+ + A L + +H + G +D+ V
Sbjct: 443 NEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACAL 501
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y KC L +A+ +F I + + ++ W +I G ++++ + M G P
Sbjct: 502 VDMYVKCGLLVLAQQLFDMIPK--KDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEP 559
Query: 257 DVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
+ ++ S+L +C L +G +L S + + ++ + + G++ A
Sbjct: 560 EESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKF 619
Query: 316 FDGMCDRTRVS-WTAMISGYAQKGDLDEALRL 346
+ M + + W A++SG D++ A ++
Sbjct: 620 IETMPIKPDAAIWGALLSGCRIHHDVELAEKV 651
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 318/578 (55%), Gaps = 2/578 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL +F M+ + + P+ +T + ACA + D + +H +++K+ D + +++D
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+Y KC ++ A+ +F+ +V WN M+V + Q+ L K +F M+ GI + T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + + L + +HS I G ++D+ V I Y+K L A + +E
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ R VVSW S+I G D +++L ++ M G PD + S S+C +A+ QG
Sbjct: 409 K--RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H+ G+ D+S+ NTL+++Y++CG + A LF + + ++W +ISG+ Q
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQS 526
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
+AL +F M AG ++ T +S IS ++ GK A G V
Sbjct: 527 RLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVA 586
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NALI +Y KCGSI DA+ +F + + VSW T+I C+ +G +EALDLF QM + L+
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VTF+ VL AC+H G +E+G YF M+ VY +NP +HY+C+ D+LGR G+L A
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARR 706
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
FV MPI ++A IW TLL ACK+H+NIEIGE A L ELEPH +A YV ++N YA+ G+
Sbjct: 707 FVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGK 766
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W +R MMK ++K PG+S + + F V D
Sbjct: 767 WANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGD 804
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 241/528 (45%), Gaps = 11/528 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + +A L+ +M + P + AC K F +MIH +
Sbjct: 112 WVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVY 171
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S+ FV ++ +Y A ++F M D ++N +I G AQ G E L
Sbjct: 172 KQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQ 231
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+L G++ D VTV L A L K +HS+ + G+ D + + Y
Sbjct: 232 IFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYV 291
Query: 202 KCNDLKMAELVFRGIEEGLRT-VVSWNSIIGGCTYGDKFD--DSLNFYRHMIYDGFRPDV 258
KC D++ A +F G RT VV WN ++ YG D S + M G P+
Sbjct: 292 KCGDIETAHDIF---NLGDRTNVVLWNLML--VAYGQISDLAKSFEIFGQMQATGIHPNQ 346
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +L +C C + G +HS I GF+ D+ V LI MYSK G +D AR + +
Sbjct: 347 FTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEM 406
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ R VSWT+MI+GY Q +EAL F M+ G PD + + S S C A+ G
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
G ++ + N L+++Y++CG +A LF + K ++W +I+G +
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQS 526
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
+ +AL +F +M + + N TF++ + A + +++G K + E
Sbjct: 527 RLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTS-ETEV 585
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIE 545
+ + L G+ G +++A M ++++ W T++ +C H R +E
Sbjct: 586 ANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGRGLE 632
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 214/440 (48%), Gaps = 6/440 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + ++ K+ +F +M+ I PN T+P I + C + IH +
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSI 373
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F SD++V ++DMY+K LD A K+ + + RDV SW +MI G+ Q F E+ L
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ G+ D + + A K + +H+ G AD+S+ NT ++ YA
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYA 493
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C + A +FR IE + ++WN +I G + +L + M G + +V T
Sbjct: 494 RCGRSEEAFSLFREIEH--KDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTF 551
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S +S+ + QG+ VH + G + V N LIS+Y KCG I+ A+ +F M
Sbjct: 552 ISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL 611
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
R VSW +I+ +Q G EAL LF M+ G P+ VT + +++ C G +E G +
Sbjct: 612 RNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSY 671
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
F + + GL ++D+ + G + AR +P + W T+++ C ++
Sbjct: 672 FKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHK 731
Query: 440 EFVEALDLFHQMMELDLRPN 459
+E +L + + L+L P+
Sbjct: 732 N-IEIGELAAKHL-LELEPH 749
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 223/463 (48%), Gaps = 10/463 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH V +D + ++D+YAK + A ++F ++ RD SW AM+ G+AQ G
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ L+ M + + + A K + + +H+ ++ V N
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y K+AE VF + R V++N++I G + +L + M G R
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDR--VTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD TV SLL++C L +G+ +HS+ + G D +L+ +Y KCGDI++A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 316 FDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F+ + DRT V W M+ Y Q DL ++ +F M+A G P+ T ++ C +G
Sbjct: 303 FN-LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQ 361
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ELG+ + + G + ++ V LIDMYSK G + AR++ L ++ VVSWT+MIAG
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAG 421
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN- 493
+ EAL F +M + + P+ + + AC + +G + +VY
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG---LQIHARVYVSGY 478
Query: 494 -PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+++ ++ + +L R G+ +EA + + K D W L+
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIEHK-DEITWNGLI 520
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 172/363 (47%), Gaps = 4/363 (1%)
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L+ +H+ + G+ AD + N I YAK + A VF+ E R VSW +++ G
Sbjct: 61 LVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFK--ELSSRDHVSWVAMLSG 118
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
++ Y M + P + S+LS+C + QGR++H+ F +
Sbjct: 119 YAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSE 178
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
V N LI++Y G A +F M RV++ +ISG+AQ G + AL++F M+
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
+G PD VTV S+++ C G L+ GK +Y G+ + + +L+D+Y KCG I
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A ++F VV W M+ + ++ ++F QM + PN+ T+ +L+ CT
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTC 358
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 532
G +E G +L K ++ + D+ + G L +A ++ M K D W
Sbjct: 359 TGQIELGEQIHSLSIK-NGFESDMYVSGVLIDMYSKYGCLDKARKILE-MLEKRDVVSWT 416
Query: 533 TLL 535
+++
Sbjct: 417 SMI 419
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/600 (36%), Positives = 329/600 (54%), Gaps = 8/600 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + + N +ALL F M +N PN F +AC+ I G +V
Sbjct: 136 WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVV 195
Query: 82 KSPFW-SDIFVQTTMVDMYAKC-DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K+ + SD+ V ++DM+ K L A+K+F+KMP+R+ +W MI Q G+ +
Sbjct: 196 KTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEA 255
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF M L G + D T+ G+ A + + L L + +HS I G+ D V I+
Sbjct: 256 IDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINM 315
Query: 200 YAKCN---DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD-SLNFYRHMIYDGFR 255
YAKC+ + A +F I + V SW ++I G +D+ +L+ +R MI
Sbjct: 316 YAKCSVDGSMCAARKIFDQILD--HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T S L +C AL G V +H + GF V N+LISMY++ G ID AR
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + ++ +S+ +I YA+ + +EAL LF +E G T S++SG G +
Sbjct: 434 FDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTI 493
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ GLK N VCNALI MYS+CG+I A ++F + ++ V+SWT++I G
Sbjct: 494 GKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGF 553
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G +AL+LFH+M+E +RPN VT++AVL AC+H G + +GW +F M + V P
Sbjct: 554 AKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPR 613
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HY+CM D+LGR G L EA+ F+ SMP K+DA +W T L AC++H N+E+G++ A +
Sbjct: 614 MEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMII 673
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
E EPH A Y+ ++N+YA +WD V+N+R MK + K G S V + K F V D
Sbjct: 674 EQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGD 733
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 245/514 (47%), Gaps = 18/514 (3%)
Query: 20 NQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
N ++ + ++ HKA+ M P+ T+ K C + F ++H
Sbjct: 32 NPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEK 91
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM-PDRDVASWNAMIVGFA--QMGFL 136
+ +S D +++ +Y+KC + + A +F M RD+ SW+AM+ FA MGF
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGF- 150
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNT 195
+ L F +M G + T+A A+ +S+ S+ F + G + +DV V
Sbjct: 151 -RALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCG 209
Query: 196 WISAYAKCN-DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I + K DL A VF + E R V+W +I ++++ + MI G+
Sbjct: 210 LIDMFVKGRGDLVSAFKVFEKMPE--RNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGY 267
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---GDIDS 311
PD T+ ++S+C E L+ G+ +HS I +G LD V LI+MY+KC G + +
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR +FD + D SWTAMI+GY QKG D EAL LF M +P+ T S + C
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
AL +G+ +A G V N+LI MY++ G I DAR+ F L EK ++S+ T
Sbjct: 388 NLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNT 447
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I A N EAL+LF+++ + + + TF ++L G + KG + +V
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE---QIHARVI 504
Query: 491 QVNPELNHYSCMA--DLLGRKGKLKEALDFVQSM 522
+ +LN C A + R G ++ A + M
Sbjct: 505 KSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 335/603 (55%), Gaps = 7/603 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDI---EPNNLTFPFIAKACAKLSDFLYSQ 74
T+ WN+ +R + + + L LF +M + I P+N T K+C+ L +
Sbjct: 66 TVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGK 125
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
MIHG + K +D+FV + ++++Y+KC +++ A K+F + P +DV W ++I G+ Q G
Sbjct: 126 MIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNG 185
Query: 135 FLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
E L F M L + D VT++ A +L +SVH F G D + +
Sbjct: 186 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 245
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N+ ++ Y K ++ A +FR E + ++SW+S++ ++LN + MI
Sbjct: 246 NSILNLYGKTGSIRSAANLFR--EMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKR 303
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+ TV+S L +C L +G+ +H ++YGF+LD++V L+ MY KC +A
Sbjct: 304 IELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAI 363
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LF+ M + VSW + SGYA+ G ++L +F M + G PD + ++ +++ + G
Sbjct: 364 DLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELG 423
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
++ + G +N + +LI++Y+KC SI +A ++F + K VV+W+++IA
Sbjct: 424 IVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIA 483
Query: 434 GCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G+ EAL LF+QM D++PN VTF+++L AC+HAG +E+G F++M YQ+
Sbjct: 484 AYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQL 543
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P HY M DLLGR G+L +ALD + MP+++ +WG LL AC+IH+NI+IGE A
Sbjct: 544 MPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAAL 603
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
LF L+P+ A Y ++NIY + W A LRT++K N+ KK GQS+V I + +F
Sbjct: 604 NLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFI 663
Query: 613 VED 615
D
Sbjct: 664 ASD 666
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/521 (28%), Positives = 241/521 (46%), Gaps = 20/521 (3%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
MK+ D L + C+K+S +H +K D FV T + +YA+
Sbjct: 1 MKRRD-----LLVKLLETCCSKIS----IPQLHSQCLKVGLAHDSFVVTKLNVLYARYAS 51
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI---QADFVTVMGL 161
L A+KLF++ P + V WNA++ + G + L LF+ M I + D TV
Sbjct: 52 LCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIA 111
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
++ + L L K +H F +D D+ V + I Y+KC + A VF E +
Sbjct: 112 LKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVF--TEYPKQ 169
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFY-RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
VV W SII G + +L F+ R ++ + PD T+VS S+C GR V
Sbjct: 170 DVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSV 229
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H GFD + + N+++++Y K G I SA LF M + +SW++M++ YA G
Sbjct: 230 HGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAE 289
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
AL LF M + VTV+S + C S LE GK A + G + ++ V AL
Sbjct: 290 TNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTAL 349
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+DMY KC S +A +LF +P+K VVSW + +G A G ++L +F M+ RP+
Sbjct: 350 MDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDA 409
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+ + +L A + G +++ ++K N E S + +L + + A +
Sbjct: 410 IALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGAS-LIELYAKCSSIDNANKVFK 468
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M + D W +++ A H GE +++ HS
Sbjct: 469 GMR-RKDVVTWSSIIAAYGFHGQ---GEEALKLFYQMSNHS 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 5/179 (2%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL + V L +Y++ S+ A +LF P KTV W ++ L G++VE L LF
Sbjct: 31 GLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLF 90
Query: 449 HQMME---LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
HQM + RP+ T L++C+ LE G + K +++ ++ S + +L
Sbjct: 91 HQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKK-KKIDNDMFVGSALIEL 149
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
+ G++ +A+ P K D +W +++ + + + E+ R+ LE S P
Sbjct: 150 YSKCGQMNDAVKVFTEYP-KQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDP 207
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 318/578 (55%), Gaps = 2/578 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL +F M+ + + P+ +T + ACA L D +H ++ K+ SD ++ +++D
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD 287
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+Y KC ++ A +F+ +V WN M+V F Q+ L K LF M+ GI+ + T
Sbjct: 288 LYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFT 347
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + + + L + +HS + G ++D+ V I Y+K L+ A V ++
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK 407
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E + VVSW S+I G + D+L ++ M G PD + S +S C A+ QG
Sbjct: 408 E--KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H+ G+ DVS+ N L+++Y++CG I A F+ + + ++W ++SG+AQ
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G +EAL++F M+ +G ++ T +S +S ++ GK G V
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVG 585
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NALI +Y KCGS DA+ F + E+ VSW T+I C+ +G +EALDLF QM + ++
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIK 645
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VTF+ VL AC+H G +E+G YF M+ Y + P +HY+C+ D+ GR G+L A
Sbjct: 646 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKK 705
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F++ MPI +DA +W TLL ACK+H+NIE+GE+ A L ELEPH +A YV ++N YA+ +
Sbjct: 706 FIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEK 765
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W +R MM+ V+K PG+S + + F V D
Sbjct: 766 WANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGD 803
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 246/513 (47%), Gaps = 7/513 (1%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+AL L+R+M + + P + +C K F ++IH K F S+IFV
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++ +Y +C A ++F MP RD ++N +I G AQ G E L +F M+ G+ D
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
VT+ L A L +HS+ G+ +D + + + Y KC D++ A ++F
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ VV WN ++ + S + M G RP+ T +L +C C +
Sbjct: 304 SSDR--TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G +HS + GF+ D+ V LI MYSK G ++ AR + + + ++ VSWT+MI+GY
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q +AL F M+ G PD + + S ISGC A+ G G +V
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDV 481
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+ NAL+++Y++CG I +A F + K ++W +++G A +G EAL +F +M +
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLK 513
++ N TF++ L A + +++G + K + E+ + + L G+ G +
Sbjct: 542 GVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVG--NALISLYGKCGSFE 599
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIH-RNIE 545
+A M +++ W T++ +C H R +E
Sbjct: 600 DAKMEFSEMSERNEVS-WNTIITSCSQHGRGLE 631
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 229/463 (49%), Gaps = 10/463 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH V V ++D+Y+K + A ++F+++ RD SW AM+ G+AQ G
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ L L+ M G+ + + + A+ + + +H+ G G +++ V N
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y +C ++AE VF + R V++N++I G + +L + M + G
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPH--RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD T+ SLL++C L +G +HS+ G D + +L+ +Y KCGD+++A +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 316 FDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F+ DRT V W M+ + Q DL ++ LF M+AAG P+ T ++ C +
Sbjct: 302 FNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
++LG+ + + G + ++ V LIDMYSK G + AR + L EK VVSWT+MIAG
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY--QV 492
+ +AL F +M + + P+ + + + C + +G + ++Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHARIYVSGY 477
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ +++ ++ + +L R G+++EA + + K D W L+
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLV 519
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 197/428 (46%), Gaps = 5/428 (1%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSL 173
M R AS + GF KVL LF + R G L + + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ +H+ + G+ V N I Y+K + A VF E R VSW +++ G
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE--ELSARDNVSWVAMLSGY 118
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+++L YR M G P + S+LSSC E QGRL+H+ G +GF ++
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V N +I++Y +CG A +F M R V++ +ISG+AQ G + AL +F M+ +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD VT+ S+++ C G L+ G +Y G+ + ++ +L+D+Y KCG + A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+F + VV W M+ + ++ +LF QM +RPN+ T+ +L+ CT
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
++ G +L K ++ + D+ + G L++A ++ + K D W +
Sbjct: 359 REIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTS 416
Query: 534 LLCACKIH 541
++ H
Sbjct: 417 MIAGYVQH 424
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 3/312 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ ++ + + W S I V AL F+ M+K I P+N+ CA ++
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
IH I S + D+ + +V++YA+C R+ A+ F+++ +D +WN ++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GFAQ G E+ L +F M G++ + T + A+ + + K +H+ I G
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V N IS Y KC + A++ F + E R VSWN+II C+ + ++L+ +
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIITSCSQHGRGLEALDLFDQ 638
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M +G +P+ T + +L++C + +G S YG +I ++ + G
Sbjct: 639 MKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAG 698
Query: 308 DIDSARFLFDGM 319
+D A+ + M
Sbjct: 699 QLDRAKKFIEEM 710
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 323/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V E + A+ +F M+ +PN++TF + CA + + +HG ++
Sbjct: 41 WNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVI 100
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F D V +V MY+K +L A KLF+ MPD +V +WN MI GF Q GF+++
Sbjct: 101 SCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASL 160
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G+ D +T + + L K +H + + G+ DV + + I Y
Sbjct: 161 LFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYF 220
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+ MA +F+ + +V +II G +D+L +R ++ + P+ T+
Sbjct: 221 KCRDVGMACKIFK--QSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTL 278
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C L G+ +H++ + +G D V + ++ MY+KCG +D A +F M +
Sbjct: 279 ASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPE 338
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W A+I+ +Q G EA+ LF M G D V++ + +S C AL GK
Sbjct: 339 KDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAI 398
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
++ G V +ALIDMY KCG++ AR +F + EK VSW ++IA +G
Sbjct: 399 HSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHL 458
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+L LFH+M+E ++P+ VTFL +L AC HAG ++KG YF MT+ Y + + HY+C
Sbjct: 459 EVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYAC 518
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DL GR G+L EA + +++MP D G+WGTLL AC++H N+E+ E + L +L+P +
Sbjct: 519 IVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPEN 578
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++N++A G+W V +R++MK+ V+K PG S + +N T F D
Sbjct: 579 SGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAAD 632
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 226/472 (47%), Gaps = 4/472 (0%)
Query: 85 FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFY 144
F D FV ++++ +YA+ ++ A +LFDKMP++D WN M+ GF + G + +F
Sbjct: 3 FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFE 62
Query: 145 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
+MR + + +T + +H I G D V N ++ Y+K
Sbjct: 63 DMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFG 122
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSL 264
L A +F + + VV+WN +I G D++ + MI G PD T S
Sbjct: 123 QLSDALKLFNTMPD--TNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
L S +L QG+ +H + + +G LDV + + LI +Y KC D+ A +F +
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
V TA+ISGY G ++AL +F + P+ VT+ S++ C L LGK
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
GL + V +A++DMY+KCG + A ++F +PEK V W +I C+ NG+ EA
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
+DLF QM L + V+ A L AC + L G + M K + E+ S + D
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK-GAFDSEVFAESALID 419
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ G+ G L A M K++ W +++ A H ++E+ + +++ E
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVS-WNSIIAAYGSHGHLEVSLALFHKMLE 470
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 177/356 (49%), Gaps = 6/356 (1%)
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
+G + D V ++ I YA+ ++ A +F + + V WN ++ G + + ++
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPN--KDCVLWNVMLNGFVKCGEPNSAV 58
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISM 302
+ M +P+ T S+LS C EAL + G +H I GF D V N L++M
Sbjct: 59 KVFEDMRNCQTKPNSITFASVLSICA-SEALSEFGNQLHGLVISCGFHFDPLVANALVAM 117
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
YSK G + A LF+ M D V+W MI+G+ Q G +DEA LF M +AG PD +T
Sbjct: 118 YSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITF 177
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
S + +S +L+ GK Y G+ +V + +ALID+Y KC +G A ++F
Sbjct: 178 ASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTN 237
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+V T +I+G LNG +AL++F ++E + PN VT +VL AC L G
Sbjct: 238 VDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKEL 297
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ K + ++ + S + D+ + G+L A + MP K DA W ++ C
Sbjct: 298 HANILK-HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK-DAVCWNAIITNC 351
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/595 (34%), Positives = 337/595 (56%), Gaps = 4/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V + + L LF+ M K + + T+ + ++CA LS F +HGH +
Sbjct: 207 WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHAL 266
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F D + T +DMYAKC+R+ A+K+F+ +P+ S+NA+IVG+A+ K L
Sbjct: 267 KSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALD 326
Query: 142 LFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +++ + D +++ G LT ++ +HL ++ +H + G+ ++ V NT + Y
Sbjct: 327 IFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQ-LHGLAVKCGLGFNICVANTILDMY 385
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC L A L+F +E R VSWN+II ++ +L+ + M+ PD T
Sbjct: 386 GKCGALMEACLIFEEMER--RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFT 443
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S++ +C +AL G +H I G LD V + L+ MY KCG + A + +
Sbjct: 444 YGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLE 503
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++T VSW ++ISG++ + + A R F M G +PD T +++ C +ELGK
Sbjct: 504 EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQ 563
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
L +V + + L+DMYSKCG++ D+R +F P++ V+W+ MI A +G
Sbjct: 564 IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGL 623
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+A++LF +M L+++PN F++VL+AC H G+++KG YF M Y ++P++ HYS
Sbjct: 624 GEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYS 683
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G++ EAL ++SMP ++D IW TLL CK+ N+E+ E L +L+P
Sbjct: 684 CMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQ 743
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ YV +AN+YA+ G W VA +R++MK ++KK PG S + + + TF V D
Sbjct: 744 DSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGD 798
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 260/535 (48%), Gaps = 8/535 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + K++ +F RM+ I + TF I KAC+ + D+ +H +
Sbjct: 106 WNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAI 165
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F +D+ + +VDMY+KC +LD A+++F +MP+R++ W+A+I G+ Q + L
Sbjct: 166 QMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLK 225
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M VG+ T + ++ L +H + D + + YA
Sbjct: 226 LFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYA 285
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A VF + R S+N+II G D+ +L+ ++ + + D ++
Sbjct: 286 KCERMFDAWKVFNTLPNPPRQ--SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISL 343
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
L++C + ++G +H + G ++ V NT++ MY KCG + A +F+ M
Sbjct: 344 SGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMER 403
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ + Q ++ + L LF +M + PD T S++ C AL G
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEI 463
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G+ + V +AL+DMY KCG + +A ++ L EKT VSW ++I+G + +
Sbjct: 464 HGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQS 523
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A F QM+E+ + P+ T+ VL C + +E G + K+ Q++ ++ S
Sbjct: 524 ENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKL-QLHSDVYIAST 582
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ D+ + G ++++ + P K D W ++CA H +GE A LFE
Sbjct: 583 LVDMYSKCGNMQDSRLMFEKAP-KRDYVTWSAMICAYAYHG---LGEK-AINLFE 632
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/574 (25%), Positives = 251/574 (43%), Gaps = 72/574 (12%)
Query: 55 LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK 114
LTF I + C+ L + +H ++ + F I+V ++ Y K +++ A+K+FD+
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 115 MPDRDVASWNAMIVGFA---QMGFLE----------------------------KVLCLF 143
MP RDV SWN +I G+A MGF + K + +F
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
MR + I D+ T + +A + L VH I +G + DV + + Y+KC
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
L A VFR + E R +V W+++I G D+F + L ++ M+ G +T S
Sbjct: 187 KKLDDAFRVFREMPE--RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+ SC A G +H H + F D + + MY+KC + A +F+ + +
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
R S+ A+I GYA++ +AL +F +++ D +++ ++ C G
Sbjct: 305 RQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHG 364
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
A GL N+ V N ++DMY KCG++ +A +F + + VSW +IA N E V+
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SC 501
L LF M+ + P+ T+ +V++AC L G + ++ + L+ + S
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG---TEIHGRIIKSGMGLDWFVGSA 481
Query: 502 MADLLGRKGKLKEALD--------------------------------FVQ--SMPIKSD 527
+ D+ G+ G L EA F Q M I D
Sbjct: 482 LVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPD 541
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ T+L C IE+G+ + ++ +L+ HS
Sbjct: 542 NYTYATVLDVCANMATIELGKQIHAQILKLQLHS 575
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 1 MAASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFI 60
M A + RL + T WNS I + ++ A F +M + I P+N T+ +
Sbjct: 493 MEAEKIHARLEE----KTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATV 548
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
CA ++ + IH I+K SD+++ +T+VDMY+KC + + +F+K P RD
Sbjct: 549 LDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDY 608
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
+W+AMI +A G EK + LF M+L+ ++ + + + +A H ++ K +H F
Sbjct: 609 VTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVD--KGLHYF 666
Query: 181 G---IHIGVDADVS 191
H G+D +
Sbjct: 667 QKMLSHYGLDPQME 680
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 318/578 (55%), Gaps = 2/578 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL +F M+ + + P+ +T + ACA L D +H ++ K+ SD ++ +++D
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD 287
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+Y KC ++ A +F+ +V WN M+V F Q+ L K LF M+ GI+ + T
Sbjct: 288 LYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFT 347
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + + + L + +HS + G ++D+ V I Y+K L+ A V ++
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK 407
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E + VVSW S+I G + D+L ++ M G PD + S +S C A+ QG
Sbjct: 408 E--KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H+ G+ DVS+ N L+++Y++CG I A F+ + + ++W ++SG+AQ
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G +EAL++F M+ +G ++ T +S +S ++ GK G V
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVG 585
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NALI +Y KCGS DA+ F + E+ VSW T+I C+ +G +EALDLF QM + ++
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIK 645
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VTF+ VL AC+H G +E+G YF M+ Y + P +HY+C+ D+ GR G+L A
Sbjct: 646 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKK 705
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F++ MPI +DA +W TLL ACK+H+NIE+GE+ A L ELEPH +A YV ++N YA+ +
Sbjct: 706 FIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEK 765
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W +R MM+ V+K PG+S + + F V D
Sbjct: 766 WANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGD 803
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 246/513 (47%), Gaps = 7/513 (1%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+AL L+R+M + + P + +C K F ++IH K F S+IFV
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++ +Y +C A ++F MP RD ++N +I G AQ G E L +F M+ G+ D
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
VT+ L A L +HS+ G+ +D + + + Y KC D++ A ++F
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ VV WN ++ + S + M G RP+ T +L +C C +
Sbjct: 304 SSDR--TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G +HS + GF+ D+ V LI MYSK G ++ AR + + + ++ VSWT+MI+GY
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q +AL F M+ G PD + + S ISGC A+ G G +V
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDV 481
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+ NAL+++Y++CG I +A F + K ++W +++G A +G EAL +F +M +
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLK 513
++ N TF++ L A + +++G + K + E+ + + L G+ G +
Sbjct: 542 GVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVG--NALISLYGKCGSFE 599
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIH-RNIE 545
+A M +++ W T++ +C H R +E
Sbjct: 600 DAKMEFSEMSERNEVS-WNTIITSCSQHGRGLE 631
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 229/463 (49%), Gaps = 10/463 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH V V ++D+Y+K + A ++F+++ RD SW AM+ G+AQ G
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ L L+ M G+ + + + A+ + + +H+ G G +++ V N
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y +C ++AE VF + R V++N++I G + +L + M + G
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPH--RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD T+ SLL++C L +G +HS+ G D + +L+ +Y KCGD+++A +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 316 FDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F+ DRT V W M+ + Q DL ++ LF M+AAG P+ T ++ C +
Sbjct: 302 FNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
++LG+ + + G + ++ V LIDMYSK G + AR + L EK VVSWT+MIAG
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY--QV 492
+ +AL F +M + + P+ + + + C + +G + ++Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHARIYVSGY 477
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ +++ ++ + +L R G+++EA + + K D W L+
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLV 519
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 170/358 (47%), Gaps = 3/358 (0%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSL 173
M R AS + GF KVL LF + R G L + + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ +H+ + G+ V N I Y+K + A VF E R VSW +++ G
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE--ELSARDNVSWVAMLSGY 118
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+++L YR M G P + S+LSSC E QGRL+H+ G +GF ++
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V N +I++Y +CG A +F M R V++ +ISG+AQ G + AL +F M+ +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD VT+ S+++ C G L+ G +Y G+ + ++ +L+D+Y KCG + A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+F + VV W M+ + ++ +LF QM +RPN+ T+ +L+ CT
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCT 356
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 3/312 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ ++ + + W S I V AL F+ M+K I P+N+ CA ++
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
IH I S + D+ + +V++YA+C R+ A+ F+++ +D +WN ++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GFAQ G E+ L +F M G++ + T + A+ + + K +H+ I G
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V N IS Y KC + A++ F + E R VSWN+II C+ + ++L+ +
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIITSCSQHGRGLEALDLFDQ 638
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M +G +P+ T + +L++C + +G S YG +I ++ + G
Sbjct: 639 MKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAG 698
Query: 308 DIDSARFLFDGM 319
+D A+ + M
Sbjct: 699 QLDRAKKFIEEM 710
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/622 (35%), Positives = 338/622 (54%), Gaps = 28/622 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I + +N AL F RM+ + + NN TFP + KACA L L + +H ++
Sbjct: 20 HWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYL 78
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR--DVASWNAMIVGFAQMGFLEK 138
+ +D F +VD Y KC A ++FD+MP+ DV SW A+I ++ G +++
Sbjct: 79 TRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDE 138
Query: 139 VLCLFYNMRLV----GIQ---ADFVTVMGLTQAAIHAKHLSLLK---SVHSFGIHIGVDA 188
F MR + G + D V++ L A + L+ +VH + G
Sbjct: 139 AFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGV 198
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ N+ + Y+ C D+ A VF GI R VVSWNS+I G T + + +L +
Sbjct: 199 STHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFED 258
Query: 249 MIYDG---FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLIS 301
M+ +G P+ TV++LL SC + VH + L DV V+ L+
Sbjct: 259 MVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLD 318
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV----- 356
M+++CG++ AR +FDG+ + V W+AMI+GY Q +EALRLF M G +
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378
Query: 357 -PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ VT++S+I+ C + GA YA + GL + + +ALIDM +KCG I R+
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438
Query: 416 LFYALPE--KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+F + E +TVVSW++MI ++GE AL+LF +M PN +T+++VL AC+HA
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHA 498
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G +E+G FN M K Y ++P HY+C+ DLLGR G L EA + + +MPIK+D +WG+
Sbjct: 499 GLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGS 558
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL AC +H N ++GE V ++ L+ +S +V +AN+Y GRWD V +R ++R+ +
Sbjct: 559 LLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGL 618
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
+K PGQS + I + +F ED
Sbjct: 619 RKIPGQSFIEIGNEVYSFMAED 640
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ W+S I E +AL LF M+ EPN +T+ + AC+ +
Sbjct: 447 TRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKS 506
Query: 76 IHGHIVKSPFWSDIFVQ-TTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMI 127
+ K S +VD+ + LD A+ + MP + D+A W +++
Sbjct: 507 CFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLL 560
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/609 (35%), Positives = 331/609 (54%), Gaps = 22/609 (3%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I+ +N+ IR + A L ++ +PNN TFPF+ KAC+ L D ++ +H
Sbjct: 94 IHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHC 153
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG-FLE 137
H ++ +D+FV T +VD+YAKC A +F +MP RDV +WNAM+ G+A G + +
Sbjct: 154 HAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSD 213
Query: 138 KVLCLFYNMRLVGIQADFV----TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD---- 189
+ CL +Q D T++ L LS ++VH++ + D
Sbjct: 214 TIACLLL------MQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDG 267
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + YAKC L A VF + +R V+W++++GG + ++ + ++ M
Sbjct: 268 VLVGTALLDMYAKCGHLVYASRVFEAM--AVRNEVTWSALVGGFVLCGRMLEAFSLFKDM 325
Query: 250 IYDGF---RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
+ G P T+V S L +C L G+ +H+ G D++ N+L+SMY+K
Sbjct: 326 LAQGLCFLSP--TSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKA 383
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G ID A LFD M + VS++A++SGY Q G DEA R+F M+A PD+ T++S+I
Sbjct: 384 GLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLI 443
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C AL+ GK G+ +CNALIDMY+KCG I +R++F +P + +V
Sbjct: 444 PACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIV 503
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW TMIAG ++G EA LF M P+ VTF+ ++ AC+H+G + +G +F++M
Sbjct: 504 SWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMM 563
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
Y + P + HY M DLL R G L EA F+Q MP+K+D +WG LL AC++H+NI++
Sbjct: 564 AHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDL 623
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
G+ V+ + +L P +V ++NI++ GR+D A +R + K KK PG S + ING
Sbjct: 624 GKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEING 683
Query: 607 KTCTFTVED 615
F D
Sbjct: 684 SLHAFIGGD 692
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 211/446 (47%), Gaps = 12/446 (2%)
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C L A LFD++P + +NA+I ++ G + R Q + T +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+A L ++VH G+ AD+ V + YAKC + A VFR + R
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPA--R 193
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VV+WN+++ G K+ D++ ++ D P+ +T+V+LL AL QGR VH
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVH 252
Query: 282 SHGIH----YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
++ + + V V L+ MY+KCG + A +F+ M R V+W+A++ G+
Sbjct: 253 AYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312
Query: 338 GDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G + EA LF M A G +V S + C L LGK GL ++
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N+L+ MY+K G I A LF + K VS++ +++G NG+ EA +F +M ++
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432
Query: 457 RPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+P+ T ++++ AC+H L+ G G+ +++ + + E + + + D+ + G++ +
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVR--GIASETSICNALIDMYAKCGRIDLS 490
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIH 541
MP + D W T++ IH
Sbjct: 491 RQIFDVMPAR-DIVSWNTMIAGYGIH 515
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/594 (33%), Positives = 329/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I +AL +F M+ + + P+++T + AC+ + D + +H +++
Sbjct: 212 FNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLL 271
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D ++ +++D+Y K ++ A ++FD +V WN M+V + Q+ L K
Sbjct: 272 KAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFD 331
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+FY M G++ + T + + H + L + +HS I G +D+ V I Y+
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYS 391
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A+ + IEE + VVSW S+I G + ++L ++ M G PD +
Sbjct: 392 KYGWLDKAQRILDMIEE--KDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGL 449
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +S+C +A+ QG +H+ G+ DVS+ N L+ +Y++CG A F+ +
Sbjct: 450 ASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEH 509
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ ++W +ISG+AQ G +EAL++F M+ AG ++ T +S IS ++ GK
Sbjct: 510 KEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQI 569
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G + NALI +Y KCGSI DA+ F+ + ++ VSW T+I C+ +G
Sbjct: 570 HARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRG 629
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+EALDLF QM + L+P+ VTF+ VL AC+H G +E+G YF M+ + ++P +HY+C
Sbjct: 630 LEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYAC 689
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ D+LGR G+L A FV+ MPI +D+ +W TLL ACK+H+N+EIGE+ A L ELEPH
Sbjct: 690 VVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHD 749
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++N YA+ G+W +R +MK V+K PG+S + + F V D
Sbjct: 750 SASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGD 803
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 250/515 (48%), Gaps = 11/515 (2%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+A+ L+R M ++ + P I AC K F ++IH + K F+S+ FV
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++ +Y +C A ++F M D ++N +I G AQ G ++ L +F M+L G+ D
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
VT+ L A L K +HS+ + G+ D + + + Y K D++ A +F
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF- 302
Query: 215 GIEEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
+ G RT VV WN ++ D S + + M+ G RP+ T +L +C
Sbjct: 303 --DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGE 360
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
+ G +HS I GF D+ V LI MYSK G +D A+ + D + ++ VSWT+MI+G
Sbjct: 361 IGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAG 420
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
Y Q EAL F M+A G PD + + S IS C A+ G G +
Sbjct: 421 YVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSAD 480
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V + N L+ +Y++CG +A F A+ K ++W +I+G A +G + EAL +F +M +
Sbjct: 481 VSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQ 540
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKL 512
+ N TF++ + A + +++G + K Y E++ + + L G+ G +
Sbjct: 541 AGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEIS--NALISLYGKCGSI 598
Query: 513 KEA-LDFVQSMPIKSDAGIWGTLLCACKIH-RNIE 545
++A +DF + K + W T++ C H R +E
Sbjct: 599 EDAKMDFFEM--TKRNEVSWNTIITCCSQHGRGLE 631
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 222/450 (49%), Gaps = 14/450 (3%)
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+ ++D+YAK + A ++F+++ RD SW A++ G+AQ G E+ + L+ M G
Sbjct: 79 IGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSG 138
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ + + A + L + +H G ++ V N IS Y +C ++A+
Sbjct: 139 VVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLAD 198
Query: 211 LVFRGIEEGLRTVVSWNSIIGG---CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
VF + V++N++I G C +GD+ +L + M G PD T+ SLL++
Sbjct: 199 RVF--CDMLYCDSVTFNTLISGHAQCGHGDR---ALGIFDEMQLSGLSPDSVTIASLLAA 253
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS- 326
C L +G+ +HS+ + G LD + +L+ +Y K GDI+ A +FD DRT V
Sbjct: 254 CSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS-GDRTNVVL 312
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W M+ Y Q DL ++ +F+ M AAG P+ T M+ C +G + LG+ +
Sbjct: 313 WNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTI 372
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
G + ++ V LIDMYSK G + A+ + + EK VVSWT+MIAG + EAL+
Sbjct: 373 KNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALE 432
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
F +M + P+ + + + AC + +G + V + +++ ++ + L
Sbjct: 433 TFKEMQACGIWPDNIGLASAISACAGIKAVHQG-SQIHARVYVSGYSADVSIWNGLVYLY 491
Query: 507 GRKGKLKEALDFVQSMPIKSDAGI-WGTLL 535
R G KEA ++ I+ GI W L+
Sbjct: 492 ARCGISKEAFSSFEA--IEHKEGITWNGLI 519
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 180/377 (47%), Gaps = 7/377 (1%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFY---NMRLVGIQADFVTVMGLTQAAIHAKHL 171
M R AS+N + GF EK+L LF +V DF + + + +
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGS--GRRW 58
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
L+ +H+ I G+ + N I YAK ++ A VF E +R VSW +++
Sbjct: 59 PLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFE--ELSVRDNVSWVAVLS 116
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G ++++ YR M G P + S+LS+C E GRL+H GF
Sbjct: 117 GYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFS 176
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+ V N LIS+Y +C A +F M V++ +ISG+AQ G D AL +F M+
Sbjct: 177 ETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQ 236
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+G PD VT+ S+++ C G L GK +Y G+ + ++ +L+D+Y K G I
Sbjct: 237 LSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIE 296
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+A ++F + VV W M+ + ++ D+F++M+ +RPN+ T+ +L+ CT
Sbjct: 297 EALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCT 356
Query: 472 HAGFLEKGWGYFNLMTK 488
H G + G +L K
Sbjct: 357 HTGEIGLGEQIHSLTIK 373
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 12/331 (3%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ + + W S I V +AL F+ M+ I P+N+ ACA +
Sbjct: 401 RILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIK 460
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
IH + S + +D+ + +V +YA+C A+ F+ + ++ +WN +I
Sbjct: 461 AVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLIS 520
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GFAQ G E+ L +F M G + + T + A+ + + K +H+ I G +
Sbjct: 521 GFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTS 580
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + N IS Y KC ++ A++ F E R VSWN+II C+ + ++L+ +
Sbjct: 581 ETEISNALISLYGKCGSIEDAKMDF--FEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQ 638
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGIHYGFDLDVSVINTLISMY 303
M G +P T V +L++C + +G + + HGIH D V++ L
Sbjct: 639 MKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDIL---- 694
Query: 304 SKCGDIDSA-RFLFDGMCDRTRVSWTAMISG 333
+ G +D A RF+ + + W ++S
Sbjct: 695 GRAGQLDRAKRFVEEMPIPADSMVWRTLLSA 725
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/596 (36%), Positives = 324/596 (54%), Gaps = 4/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I V A AL LF M ++ + +AC +L D + +H H +
Sbjct: 103 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 162
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS SD+ VQ +V MY+K +D + LF+++ D+D+ SW ++I GFAQ GF + L
Sbjct: 163 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 222
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M + G G A A + +H I +D D+ V + Y
Sbjct: 223 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 282
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A+C +L A + F IE +VSWNSI+ + ++L + M G RPD T
Sbjct: 283 ARCKNLDSARVAFYRIEA--PDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGIT 340
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V LL +CV +AL GRL+HS+ + G D DVSV N+L+SMY++C D+ SA +F +
Sbjct: 341 VRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK 400
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
D+ V+W ++++ AQ +E L+LF + + D +++ +++S + G E+ K
Sbjct: 401 DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 460
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCALNG 439
YA GL D+ M+ N LID Y+KCGS+ DA LF + + V SW+++I G A G
Sbjct: 461 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 520
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EA DLF +M L +RPN VTF+ VL AC+ GF+ +G Y+++M Y + P H
Sbjct: 521 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 580
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
SC+ DLL R GKL EA +F+ MP + D +W TLL A K+H ++E+G+ A + ++P
Sbjct: 581 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 640
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV + NIYA G W+ A L+ M+ + VKK PG+S V + G+ F VED
Sbjct: 641 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVED 696
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 217/487 (44%), Gaps = 28/487 (5%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWS-------DIFVQTTMVDMYAKCDRLDCAY 109
+ + AC++L + +H H+V S S + + ++ MY
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
R+ SW ++I Q G L LF +M G AD + +A
Sbjct: 98 --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ + VH+ + +D+ V N ++ Y+K + ++F I++ + ++SW SI
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD--KDLISWGSI 207
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
I G ++L +R MI +G P+ S +C + G +H I Y
Sbjct: 208 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYR 267
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
D D+ V +L MY++C ++DSAR F + VSW ++++ Y+ +G L EAL LF
Sbjct: 268 LDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFS 327
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M +G PD +TV ++ C AL G+ +Y GL +V VCN+L+ MY++C
Sbjct: 328 EMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCS 387
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ A ++F+ + ++ VV+W +++ CA + E L LF + + + +R++ VL
Sbjct: 388 DLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 447
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
A G+ E K V+ + + + D + G L +A+ + M D
Sbjct: 448 ASAELGYFEMVKQVHAYAFKAGLVDDRMLS-NTLIDTYAKCGSLDDAMRLFEIMGNNRDV 506
Query: 529 GIWGTLL 535
W +L+
Sbjct: 507 FSWSSLI 513
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 158/326 (48%), Gaps = 3/326 (0%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R VSW S+I + D+L + M+ G D + S + +C + GR V
Sbjct: 98 RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 157
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+H + D+ V N L++MYSK G +D LF+ + D+ +SW ++I+G+AQ+G
Sbjct: 158 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFE 217
Query: 341 DEALRLFFAMEAAG-EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
EAL++F M G P+ S CG G+ E G+ + L ++ V +
Sbjct: 218 MEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCS 277
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L DMY++C ++ AR FY + +VSW +++ ++ G EAL LF +M + LRP+
Sbjct: 278 LSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPD 337
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+T +L AC L G + + K+ ++ +++ + + + R L A+D
Sbjct: 338 GITVRGLLCACVGRDALYHGRLIHSYLVKL-GLDGDVSVCNSLLSMYARCSDLSSAMDVF 396
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIE 545
+ D W ++L AC H + E
Sbjct: 397 HEIK-DQDVVTWNSILTACAQHNHPE 421
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/596 (36%), Positives = 324/596 (54%), Gaps = 4/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I V A AL LF M ++ + +AC +L D + +H H +
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 179
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS SD+ VQ +V MY+K +D + LF+++ D+D+ SW ++I GFAQ GF + L
Sbjct: 180 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M + G G A A + +H I +D D+ V + Y
Sbjct: 240 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 299
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A+C +L A + F IE +VSWNSI+ + ++L + M G RPD T
Sbjct: 300 ARCKNLDSARVAFYRIEA--PDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGIT 357
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V LL +CV +AL GRL+HS+ + G D DVSV N+L+SMY++C D+ SA +F +
Sbjct: 358 VRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK 417
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
D+ V+W ++++ AQ +E L+LF + + D +++ +++S + G E+ K
Sbjct: 418 DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 477
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCALNG 439
YA GL D+ M+ N LID Y+KCGS+ DA LF + + V SW+++I G A G
Sbjct: 478 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 537
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EA DLF +M L +RPN VTF+ VL AC+ GF+ +G Y+++M Y + P H
Sbjct: 538 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 597
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
SC+ DLL R GKL EA +F+ MP + D +W TLL A K+H ++E+G+ A + ++P
Sbjct: 598 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 657
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV + NIYA G W+ A L+ M+ + VKK PG+S V + G+ F VED
Sbjct: 658 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVED 713
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 228/487 (46%), Gaps = 11/487 (2%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWS-------DIFVQTTMVDMYAKCDRLDCAY 109
+ + AC++L + +H H+V S S + + ++ MY +C D A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
++FD+MP R+ SW ++I Q G L LF +M G AD + +A
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ + VH+ + +D+ V N ++ Y+K + ++F I++ + ++SW SI
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD--KDLISWGSI 224
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
I G ++L +R MI +G P+ S +C + G +H I Y
Sbjct: 225 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYR 284
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
D D+ V +L MY++C ++DSAR F + VSW ++++ Y+ +G L EAL LF
Sbjct: 285 LDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFS 344
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M +G PD +TV ++ C AL G+ +Y GL +V VCN+L+ MY++C
Sbjct: 345 EMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCS 404
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ A ++F+ + ++ VV+W +++ CA + E L LF + + + +R++ VL
Sbjct: 405 DLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 464
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
A G+ E K V+ + + + D + G L +A+ + M D
Sbjct: 465 ASAELGYFEMVKQVHAYAFKAGLVDDRMLS-NTLIDTYAKCGSLDDAMRLFEIMGNNRDV 523
Query: 529 GIWGTLL 535
W +L+
Sbjct: 524 FSWSSLI 530
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 5/353 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ Y +C A VF E R VSW S+I + D+L + M+ G
Sbjct: 90 NHLITMYGRCAAPDSARQVFD--EMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSG 147
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D + S + +C + GR VH+H + D+ V N L++MYSK G +D
Sbjct: 148 TAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGF 207
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGCGQS 372
LF+ + D+ +SW ++I+G+AQ+G EAL++F M G P+ S CG
Sbjct: 208 MLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAV 267
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G+ E G+ + L ++ V +L DMY++C ++ AR FY + +VSW +++
Sbjct: 268 GSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIV 327
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
++ G EAL LF +M + LRP+ +T +L AC L G + + K+ +
Sbjct: 328 NAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL-GL 386
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ +++ + + + R L A+D + D W ++L AC H + E
Sbjct: 387 DGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPE 438
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/568 (34%), Positives = 320/568 (56%), Gaps = 12/568 (2%)
Query: 54 NLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD 113
N P + KAC ++S + IHG ++K D+FV ++ MY +C ++ A +FD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
KM +RDV SW+ MI ++ + L L M + ++ V ++ + ++ +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 174 LKSVHSFGI------HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
K++H++ I H+GV ++ + YAKC L +A +F G+ + +TVVSW
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTAL----LDMYAKCGHLGLARQLFNGLTQ--KTVVSWT 267
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++I GC ++ ++ + M + P+ T++SL+ C AL G+ +H++ +
Sbjct: 268 AMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN 327
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF + +++ L+ MY KC DI +AR LFD +R + WTAM+S YAQ +D+A LF
Sbjct: 328 GFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 387
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M +G P VT++S++S C +GAL+LGKW +Y ++ + ++ AL+DMY+KC
Sbjct: 388 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKC 447
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G I A LF + + W +I G A++G EALD+F +M ++PN +TF+ +L
Sbjct: 448 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLL 507
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC+HAG + +G F M + + P++ HY CM DLLGR G L EA + ++SMPIK +
Sbjct: 508 HACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPN 567
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTM 587
+WG L+ AC++H+N ++GE A +L E+EP + V M+NIYA RW A +R
Sbjct: 568 TIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKT 627
Query: 588 MKRNQVKKFPGQSLVHINGKTCTFTVED 615
MK +KK PG S++ +NG F + D
Sbjct: 628 MKTVGMKKEPGHSVIEVNGTVHEFLMGD 655
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/541 (35%), Positives = 311/541 (57%), Gaps = 3/541 (0%)
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++HG++VK F + V ++ YAK +R++ A +FD+MP RD+ SWN++I G A G
Sbjct: 5 VVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNG 64
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+K + LF M L G + D T++ + A + + + + VH + + G+ ++ S+ N
Sbjct: 65 LYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGN 124
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y+ C+D + +FR +E+ + VVSW ++I T FD ++ M +G
Sbjct: 125 ALLDMYSNCSDWRSTNKIFRNMEQ--KNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
RPDV + S L + E+L G+ VH + I G + + V N L+ MY KCG ++ ARF
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+FD + + +SW +I GY++ +EA LF M P+ VT+ ++ +
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLR-PNAVTMACILPAAASLSS 301
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LE G+ YA G ++ V NAL+DMY KCG++ AR LF L K ++SWT MIAG
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
++G +A+ LF QM ++P+ +F A+L AC+H+G ++GW +FN M +++ P
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+L HY+CM DLL G LKEA +F+++MPI+ D+ IW +LL C+IHRN+++ E VA +
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
FELEP + YV +ANIYA RW+ V L+ + +++ G S + + GK F E
Sbjct: 482 FELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAE 541
Query: 615 D 615
+
Sbjct: 542 N 542
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 216/451 (47%), Gaps = 7/451 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I KA+ LF RM E ++ T + AC + ++HG
Sbjct: 50 IISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHG 109
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ V++ S+ + ++DMY+ C K+F M ++V SW AMI + + G +K
Sbjct: 110 YSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDK 169
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
V LF M L GI+ D + A + L KSVH + I G++ + V N +
Sbjct: 170 VAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALME 229
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC ++ A +F + + + +SWN++IGG + + +++ + M+ RP+
Sbjct: 230 MYVKCGYMEEARFIFDHVTK--KDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNA 286
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ +L + +L +GR +H++ + G+ D V N L+ MY KCG + AR LFD
Sbjct: 287 VTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDM 346
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ ++ +SWT MI+GY G +A+ LF M+ +G PD + +++ C SG + G
Sbjct: 347 LTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEG 406
Query: 379 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCA 436
++F+ ++ + ++D+ G++ +A E +P E W +++ GC
Sbjct: 407 WRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCR 466
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
++ A + + EL+ P + +L
Sbjct: 467 IHRNVKLAEKVAEMVFELE--PENTGYYVLL 495
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 6/263 (2%)
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+ G +VH + + YGF +V N LIS Y+K I+ A +FD M R +SW ++I G
Sbjct: 1 MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
A G D+A+ LF M G+ D T+LS++ C QS +G Y+ GL
Sbjct: 61 ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+ NAL+DMYS C ++F + +K VVSWT MI G F + LF +M
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGY--FNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+RP+ + L A L+ G + + + +V P N + ++ + G +
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVAN---ALMEMYVKCGYM 237
Query: 513 KEALDFVQSMPIKSDAGIWGTLL 535
+EA F+ K D W TL+
Sbjct: 238 EEA-RFIFDHVTKKDTISWNTLI 259
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 337/603 (55%), Gaps = 8/603 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDI---EPNNLTFPFIAKACAKLSDFLYSQ 74
T+ WN+ +R + + + L LF +M + + P+N T K+C+ L +
Sbjct: 66 TVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGK 125
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
MIHG +K SD+FV + ++++Y+KC +++ A K+F + P DV W ++I G+ Q G
Sbjct: 126 MIHG-FLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNG 184
Query: 135 FLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
E L F M L + D VT++ A +L +SVH F G D + +
Sbjct: 185 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 244
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N+ ++ Y K +++A +FR E + ++SW+S++ ++LN + MI
Sbjct: 245 NSILNLYGKTGSIRIAANLFR--EMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKR 302
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+ TV+S L +C L +G+ +H ++YGF+LD++V L+ MY KC ++A
Sbjct: 303 IELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAI 362
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LF+ M + VSW + SGYA+ G ++L +F M + G PD + ++ +++ + G
Sbjct: 363 ELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELG 422
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
++ + G +N + +LI++Y+KC SI +A ++F L VV+W+++IA
Sbjct: 423 IVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIA 482
Query: 434 GCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G+ EAL L HQM D++PN VTF+++L AC+HAG +E+G F++M YQ+
Sbjct: 483 AYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQL 542
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P + HY M DLLGR G+L +ALD + +MP+++ +WG LL AC+IH+NI+IGE A
Sbjct: 543 MPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAAL 602
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
LF L+P+ A Y ++NIY + W A LRT++K N++KK GQS+V I + +F
Sbjct: 603 NLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFI 662
Query: 613 VED 615
D
Sbjct: 663 ASD 665
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 215/448 (47%), Gaps = 16/448 (3%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
MK+ D L + C+K+S +H +K D FV T + +YA+
Sbjct: 1 MKRRD-----LLVKLLETCCSKIS----ITQLHSQCLKVGLALDSFVVTKLNVLYARYAS 51
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI---QADFVTVMGL 161
L A+KLF++ P + V WNA++ + G + L LF+ M + + D TV
Sbjct: 52 LCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIA 111
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
++ + L L K +H F + +D+D+ V + I Y+KC + A VF E
Sbjct: 112 LKSCSGLQKLELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVF--TEYPKP 168
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFY-RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
VV W SII G + +L F+ R ++ + PD T+VS S+C GR V
Sbjct: 169 DVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSV 228
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H GFD + + N+++++Y K G I A LF M + +SW++M++ YA G
Sbjct: 229 HGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAE 288
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
AL LF M + VTV+S + C S LE GK A + G + ++ V AL
Sbjct: 289 TNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTAL 348
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+DMY KC S +A ELF +P+K VVSW + +G A G ++L +F M+ RP+
Sbjct: 349 MDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDA 408
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ + +L A + G +++ +TK
Sbjct: 409 IALVKILAASSELGIVQQALCLHAFVTK 436
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL + V L +Y++ S+ A +LF P KTV W ++ L G++VE L LF
Sbjct: 31 GLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLF 90
Query: 449 HQMME---LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
HQM + RP+ T L++C+ LE G + K +++ ++ S + +L
Sbjct: 91 HQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKK--KIDSDMFVGSALIEL 148
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
+ G++ +A+ P K D +W +++ + + + E+ R+ LE S P
Sbjct: 149 YSKCGQMNDAVKVFTEYP-KPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDP 206
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/597 (35%), Positives = 333/597 (55%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I E A+ L+ +M ++ P++ TF I K+C+ L DF ++ +H H++
Sbjct: 167 WTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVL 226
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F +D+ Q ++ MY K ++ A +F ++ +D+ SW +MI GF+Q+G+ + LC
Sbjct: 227 KSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALC 286
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS--LLKSVHSFGIHIGVDADVSVCNTWISA 199
F M + V G +A +K L + +H I G+ +D+ +
Sbjct: 287 HFREMLSQSVYQPNEFVFGSAFSAC-SKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC L+ A VF IE+ +V+WN+II G +S +F+ M + G P+
Sbjct: 346 YAKCGFLESARTVFYHIEKP--DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDV 403
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
TV+SLL +C P L G VHS+ + GF+LD+ V N+L+SMYSKC +++ A +F+ +
Sbjct: 404 TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDI 463
Query: 320 CDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
++ VSW +++ Q+ E LRL M A+ PD VT+ +++ GQ + E+G
Sbjct: 464 GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ GL ++ V NALI+MY+KCGS+ AR++F ++ ++SW+++I G A
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EA +LF M L ++PN +TF+ +L AC+H G +E+G + M + Y+++P H
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
SCM DLL R G L A DF++ MP D +W TLL ACK+H N+E+G+ A + +++
Sbjct: 644 CSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKID 703
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P ++A V + NI+A G W A LR+ M+R V K PGQS + I K F ED
Sbjct: 704 PSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAED 760
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 219/448 (48%), Gaps = 6/448 (1%)
Query: 34 EAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQT 93
EA KA +F++ + ++ ++T+ + AC+ L + + IH H++ + D+ +Q
Sbjct: 80 EALKAFDIFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQN 137
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
++ MY KC L A +FD MP ++V SW +MI G+++ G + + L+ M G
Sbjct: 138 HILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIP 197
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D T + ++ L + +H+ + AD+ N IS Y K + + A VF
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF 257
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPE 272
I ++ ++SW S+I G + ++L +R M+ ++P+ S S+C
Sbjct: 258 SRII--IKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLL 315
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
GR +H I +G D+ +L MY+KCG ++SAR +F + V+W A+I+
Sbjct: 316 EPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIA 375
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G+A + E+ F M G VP+ VTVLS++ C + L G +Y G
Sbjct: 376 GFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL 435
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQM 451
++ VCN+L+ MYSKC ++ DA ++F + K +VSW T++ C + E L L M
Sbjct: 436 DIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLM 495
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKG 479
++P+ VT VL + E G
Sbjct: 496 FASRIKPDHVTLTNVLVSSGQIASYEVG 523
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 2/222 (0%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I + I WN+ + + +N+A + L L + M + I+P+++T + + +++ +
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
IH I+KS DI V +++MY KC L+CA K+FD + + D+ SW+++IVG+AQ
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVS 191
G ++ LF MR +G++ + +T +G+ A H + LK + +
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
C+ + A+ L +AE R + + VV W +++ C
Sbjct: 643 HCSCMVDLLARAGCLDVAEDFIRQM-PFVPDVVVWKTLLAAC 683
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/597 (35%), Positives = 333/597 (55%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I E A+ L+ +M ++ P++ TF I K+C+ L DF ++ +H H++
Sbjct: 167 WTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVL 226
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F +D+ Q ++ MY K ++ A +F ++ +D+ SW +MI GF+Q+G+ + LC
Sbjct: 227 KSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALC 286
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS--LLKSVHSFGIHIGVDADVSVCNTWISA 199
F M + V G +A +K L + +H I G+ +D+ +
Sbjct: 287 HFREMLSQSVYQPNEFVFGSAFSAC-SKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC L+ A VF IE+ +V+WN+II G +S +F+ M + G P+
Sbjct: 346 YAKCGFLESARTVFYHIEKP--DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDV 403
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
TV+SLL +C P L G VHS+ + GF+LD+ V N+L+SMYSKC +++ A +F+ +
Sbjct: 404 TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDI 463
Query: 320 CDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
++ VSW +++ Q+ E LRL M A+ PD VT+ +++ GQ + E+G
Sbjct: 464 GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ GL ++ V NALI+MY+KCGS+ AR++F ++ ++SW+++I G A
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EA +LF M L ++PN +TF+ +L AC+H G +E+G + M + Y+++P H
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
SCM DLL R G L A DF++ MP D +W TLL ACK+H N+E+G+ A + +++
Sbjct: 644 CSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKID 703
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P ++A V + NI+A G W A LR+ M+R V K PGQS + I K F ED
Sbjct: 704 PSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAED 760
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 219/448 (48%), Gaps = 6/448 (1%)
Query: 34 EAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQT 93
EA KA +F++ + ++ ++T+ + AC+ L + + IH H++ + D+ +Q
Sbjct: 80 EALKAFDIFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQN 137
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
++ MY KC L A +FD MP ++V SW +MI G+++ G + + L+ M G
Sbjct: 138 HILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIP 197
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D T + ++ L + +H+ + AD+ N IS Y K + + A VF
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF 257
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPE 272
I ++ ++SW S+I G + ++L +R M+ ++P+ S S+C
Sbjct: 258 SRII--IKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLL 315
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
GR +H I +G D+ +L MY+KCG ++SAR +F + V+W A+I+
Sbjct: 316 EPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIA 375
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G+A + E+ F M G VP+ VTVLS++ C + L G +Y G
Sbjct: 376 GFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL 435
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQM 451
++ VCN+L+ MYSKC ++ DA ++F + K +VSW T++ C + E L L M
Sbjct: 436 DIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLM 495
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKG 479
++P+ VT VL + E G
Sbjct: 496 FASRIKPDHVTLTNVLVSSGQIASYEVG 523
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 2/222 (0%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I + I WN+ + + +N+A + L L + M + I+P+++T + + +++ +
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
IH I+KS DI V +++MY KC L+CA K+FD + + D+ SW+++IVG+AQ
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVS 191
G ++ LF MR +G++ + +T +G+ A H + LK + +
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
C+ + A+ L +AE + + + VV W +++ C
Sbjct: 643 HCSCMVDLLARAGCLDVAEDFIKQM-PFVPDVVVWKTLLAAC 683
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/593 (36%), Positives = 335/593 (56%), Gaps = 9/593 (1%)
Query: 22 WNSQIREAVDKNEAHKAL-LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V H+A+ ++ + ++I P+ TFP + KAC L D + IH
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWA 241
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K F ++FV +++ MY++ A LFD MP RD+ SWNAMI G Q G + L
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+ MRL GI+ +FVTV+ + +S +H + I G++ D+ V N I+ Y
Sbjct: 302 DVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMY 361
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK +L+ A F+ + + VVSWNSII D + F+ M +GF+PD+ T
Sbjct: 362 AKFGNLEDARKAFQ--QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGM 319
+VSL S R VH + G+ + DV + N ++ MY+K G +DSA +F+ +
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
+ +SW +I+GYAQ G EA+ ++ ME E+ P+ T +S++ GAL+ G
Sbjct: 480 PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
L +V V LID+Y KCG + DA LFY +P+++ V+W +I+ ++
Sbjct: 540 MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G + L LF +M++ ++P+ VTF+++L AC+H+GF+E+G F LM + Y + P L H
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKH 658
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM DLLGR G L+ A DF++ MP++ DA IWG LL AC+IH NIE+G++ + RLFE++
Sbjct: 659 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+ YV ++NIYA G+W+GV +R++ + +KK PG S + +N K F
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVF 771
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 247/479 (51%), Gaps = 14/479 (2%)
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+++ +H +V + IF+ T +V++YA + + FD++P +DV +WN+MI +
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 132 QMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
G + + FY + LV I+ DF T + +A L + +H + +G +V
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGTLVDGRKIHCWAFKLGFQWNV 250
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V + I Y++ +A +F + R + SWN++I G +L+ M
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALDVLDEMR 308
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G + + TVVS+L C + L+H + I +G + D+ V N LI+MY+K G+++
Sbjct: 309 LEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLE 368
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR F M VSW ++I+ Y Q D A F M+ G PDL+T++S+ S
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 371 QSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
QS + + + G L ++V++ NA++DMY+K G + A ++F +P K V+SW
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWN 488
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T+I G A NG EA++++ M E ++ PN+ T++++L A H G L++G + +
Sbjct: 489 TLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG---MKIHGR 545
Query: 489 VYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
V + N L+ + +C+ D+ G+ G+L +A+ +P +S W ++ IH + E
Sbjct: 546 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAE 603
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 202/424 (47%), Gaps = 5/424 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ I + A +AL + M+ I+ N +T I C +L D + +IH
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++K D+FV +++MYAK L+ A K F +M DV SWN++I + Q
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVT 400
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 197
F M+L G Q D +T++ L ++ +SVH F + G + DV + N +
Sbjct: 401 AHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY-DGFRP 256
YAK L A VF I ++ V+SWN++I G +++ Y+ M P
Sbjct: 461 DMYAKLGLLDSAHKVFEIIP--VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T VS+L + AL QG +H I LDV V LI +Y KCG + A LF
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + V+W A+IS + G ++ L+LF M G PD VT +S++S C SG +E
Sbjct: 579 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 638
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
GKW G+K ++ ++D+ + G + A + +P + S W ++ C
Sbjct: 639 EGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGAC 698
Query: 436 ALNG 439
++G
Sbjct: 699 RIHG 702
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 327/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V + + L LF +M++ + + + + ++CA ++ ++ +H H +
Sbjct: 205 WGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAI 264
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F +D V T +VD+YAK D L A + F +P+ V + NAM+VG + G + L
Sbjct: 265 KNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQ 324
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI D V++ G+ A K VH I G D DV V N + Y
Sbjct: 325 LFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYG 384
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A LVF+ +E+ R VSWN+II + ++D++ + M+ G PD T
Sbjct: 385 KCKALVEAYLVFQEMEQ--RDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTY 442
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C ++L G +VH I G LD V +T++ MY KCG I A+ L D +
Sbjct: 443 GSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGG 502
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW ++ISG++ +EA + F M G PD T +++ C +ELGK
Sbjct: 503 QELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQI 562
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ + + + L+DMY+KCG++ D+ +F + VSW MI G AL+G+
Sbjct: 563 HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQG 622
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL++F +M + ++ PN TF+AVL+AC+H G L+ G YF LMT Y++ P+L H++C
Sbjct: 623 FEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFAC 682
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR +EAL F++SMP+++DA IW TLL CKI +++E+ E A + L+P
Sbjct: 683 MVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDD 742
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y+ ++N+YA G+W V+ R +M++ ++KK PG S + + + F D
Sbjct: 743 SSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGD 796
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 234/520 (45%), Gaps = 4/520 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + ++ L M + + P+ T + KAC L D IH V
Sbjct: 104 WNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAV 163
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D+ + +VDMY KC L+ A + F M +R+ SW A I G Q + L
Sbjct: 164 KTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLE 223
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ +G+ + ++ LS + +H+ I AD V + YA
Sbjct: 224 LFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYA 283
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + L A F + TV + N+++ G ++L ++ M G DV ++
Sbjct: 284 KADSLVDARRAFFSLPN--HTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSL 341
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ S+C + +QG VH I GFD+DV V N ++ +Y KC + A +F M
Sbjct: 342 SGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 401
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ Q ++ + M G PD T S++ C +LE G
Sbjct: 402 RDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVV 461
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
A GL + V + ++DMY KCG I +A++L + + +VSW ++I+G +LN +
Sbjct: 462 HGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQS 521
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA F +M+++ ++P+ T+ VL C + +E G + K + E S
Sbjct: 522 EEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYIS-ST 580
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ D+ + G + ++L + K D W ++C +H
Sbjct: 581 LVDMYAKCGNMPDSLLMFEKAQ-KLDFVSWNAMICGYALH 619
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 211/449 (46%), Gaps = 4/449 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ N+ + V +AL LF+ M ++ I + ++ + ACA++ +L +H
Sbjct: 302 TVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVH 361
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+KS F D+ V+ ++D+Y KC L AY +F +M RD SWNA+I Q E
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ M G++ D T + +A + L VH I G+ D V +T +
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVV 481
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + A+ + I G + +VSWNSII G + + +++ F+ M+ G +PD
Sbjct: 482 DMYCKCGMITEAQKLHDRI--GGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPD 539
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L +C + G+ +H I D + +TL+ MY+KCG++ + +F+
Sbjct: 540 HFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE 599
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
VSW AMI GYA G EAL +F M+ A VP+ T ++++ C G L+
Sbjct: 600 KAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDD 659
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G ++F L+ + ++D+ + +A + ++P E V W T+++ C
Sbjct: 660 GCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSIC 719
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+ + A ++ LD + V L
Sbjct: 720 KIRQDVEVAETAASNVLRLDPDDSSVYIL 748
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 198/457 (43%), Gaps = 35/457 (7%)
Query: 56 TFPFIAKACAKL--SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC----------- 102
TF + + CA S Q H ++ S F FV ++ MYA+C
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 103 ----------DRLDCAY----------KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ + AY LF MPD DV SWNA++ G+ Q G + L
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
M G+ D T+ L +A + L+L +H+ + G++ DV + + Y K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
C L+ A F G+ E R VSW + I GC +++ L + M G
Sbjct: 184 CRSLEDALRFFHGMGE--RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYA 241
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S+ SC L R +H+H I F D V ++ +Y+K + AR F + +
Sbjct: 242 SVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNH 301
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
T + AM+ G + G EAL+LF M +G D+V++ + S C + G
Sbjct: 302 TVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVH 361
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A G +V V NA++D+Y KC ++ +A +F + ++ VSW +IA N +
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ + ++M+ + P+ T+ +VL+AC LE G
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYG 458
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 151/344 (43%), Gaps = 4/344 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
NT ++AYA D A +F + + VVSWN+++ G F DS+ M G
Sbjct: 74 NTMLTAYAHAGDTGAAASLFGAMPD--PDVVSWNALLSGYCQRGMFRDSVGLSVEMARRG 131
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD TT+ LL +C E L G +H+ + G ++DV + L+ MY KC ++ A
Sbjct: 132 VAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDAL 191
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F GM +R VSW A I+G Q L LF M+ G S+ C
Sbjct: 192 RFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAIT 251
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L + +A + +V A++D+Y+K S+ DAR F++LP TV + M+
Sbjct: 252 CLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMV 311
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G G EAL LF M + + V+ V AC +G L K +
Sbjct: 312 GLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIK-SGFD 370
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
++ + + DL G+ L EA Q M + D+ W ++ A
Sbjct: 371 VDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 413
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 34/205 (16%)
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR---------- 414
+ +G G+S AL G+ G V N L+ MY++CG AR
Sbjct: 11 LCAGAGRS-ALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRD 69
Query: 415 ---------------------ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
LF A+P+ VVSW +++G G F +++ L +M
Sbjct: 70 TVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMAR 129
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
+ P+R T +L+AC L G + K + ++ S + D+ G+ L+
Sbjct: 130 RGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKT-GLEMDVRAGSALVDMYGKCRSLE 188
Query: 514 EALDFVQSMPIKSDAGIWGTLLCAC 538
+AL F M ++ WG + C
Sbjct: 189 DALRFFHGMGERNSVS-WGAAIAGC 212
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/622 (35%), Positives = 337/622 (54%), Gaps = 28/622 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I + +N AL F RM+ + + NN TFP + KACA L L + +H ++
Sbjct: 20 HWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYL 78
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR--DVASWNAMIVGFAQMGFLEK 138
+ +D F +VD Y KC A ++FD+MP+ DV SW A+I ++ G +++
Sbjct: 79 TRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDE 138
Query: 139 VLCLFYNMRLV----GIQ---ADFVTVMGLTQAAIHAKHLSLLK---SVHSFGIHIGVDA 188
F MR + G + D V++ L A + L+ +VH + G
Sbjct: 139 AFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGV 198
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ N+ + Y+ C D+ A VF GI R VVSWNS+I G + + +L +
Sbjct: 199 STHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFED 258
Query: 249 MIYDG---FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLIS 301
M+ +G P+ TV++LL SC + VH + L DV V+ L+
Sbjct: 259 MVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLD 318
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV----- 356
M+++CG++ AR +FDG+ + V W+AMI+GY Q +EALRLF M G +
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378
Query: 357 -PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ VT++S+I+ C + GA YA + GL + + +ALIDM +KCG I R+
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438
Query: 416 LFYALPE--KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+F + E +TVVSW++MI ++GE AL+LF +M PN +T+++VL AC+HA
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHA 498
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G +E+G FN M K Y ++P HY+C+ DLLGR G L EA + + +MPIK+D +WG+
Sbjct: 499 GLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGS 558
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL AC +H N ++GE V ++ L+ +S +V +AN+Y GRWD V +R ++R+ +
Sbjct: 559 LLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGL 618
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
+K PGQS + I + +F ED
Sbjct: 619 RKIPGQSFIEIGNEVYSFMAED 640
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ W+S I E +AL LF M+ EPN +T+ + AC+ +
Sbjct: 447 TRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKS 506
Query: 76 IHGHIVKSPFWSDIFVQ-TTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMI 127
+ K S +VD+ + LD A+ + MP + D+A W +++
Sbjct: 507 CFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLL 560
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 329/594 (55%), Gaps = 3/594 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N IR D + AL +R M P+ TFP + K CA+ + H ++K
Sbjct: 89 NVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIK 148
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+D++ ++V +YAK + A ++FD MP RD+ SWN M+ G+ G L
Sbjct: 149 LGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALAC 208
Query: 143 FYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + + D V V+ A L+L + +H + I G++ DV V + + Y
Sbjct: 209 FREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYC 268
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ AE VF + LRTVV+WN +IGG ++ D+ + + M DGF+ +V T
Sbjct: 269 KCGNVFFAENVFAKMP--LRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTA 326
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL++C E+ + GR VH++ + F V + L+ MY K G ++S+ +F + D
Sbjct: 327 INLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITD 386
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+T VSW MI+ Y EA+ LF + PD T+ +++ G++ K
Sbjct: 387 KTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQM 446
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+Y G D+ ++ NA++ MY++CG+I +RE+F +P K V+SW T+I G A++G+
Sbjct: 447 HSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQG 506
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL++F +M + PN TF++VL AC+ +G +GW FN M + Y + P++ HY C
Sbjct: 507 KIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGC 566
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G+L+E L F+++MPI + IWG+LL A + +I+I EY A R+F+LE ++
Sbjct: 567 MTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNN 626
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++++YA GRW+ V +R++MK +++ +SLV +N K C+F D
Sbjct: 627 TGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGD 680
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+LI + G +D A F G+ MI G+A +AL + AM AG
Sbjct: 58 KSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGAR 117
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
PD T ++ C ++GAL G+ GL +V N+L+ +Y+K G +GDA +
Sbjct: 118 PDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERV 177
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME-LDLRPNRVTFLAVLQAC 470
F +P + +VSW TM+ G NG AL F +M + L + + V +A L AC
Sbjct: 178 FDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAAC 232
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I + +A+ LF + + P+ T + A L + +H
Sbjct: 388 TLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMH 447
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+IVK + + ++ MYA+C + + ++FDKMP +DV SWN +I+G+A G +
Sbjct: 448 SYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGK 507
Query: 138 KVLCLFYNMRLVGIQAD---FVTVM 159
L +F M+ G++ + FV+V+
Sbjct: 508 IALEMFDEMKCSGMEPNESTFVSVL 532
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/615 (34%), Positives = 342/615 (55%), Gaps = 14/615 (2%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
SL P + ++ WN IR++ + + L ++ M + + NNLT+P + KAC
Sbjct: 2 SLRPSFRR-----SLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKAC 56
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
A L + M+HGH++K F +D FVQT +VDMY+KC + A ++FD+MP R V SWN
Sbjct: 57 ANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWN 116
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQ---ADFVTVM-GLTQAAIHAKHLSLLKSVHSF 180
AM+ +++ +++ L L M ++G + + FV+++ G + HL L KS+H
Sbjct: 117 AMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHL-LGKSIHCC 175
Query: 181 GIHIG-VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
I +G V +VS+ N+ + Y + + A VF ++E ++++SW ++IGG
Sbjct: 176 LIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDE--KSIISWTTMIGGYVKIGHA 233
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
++ + M + D ++L+S C+ L+ VHS + G + V N L
Sbjct: 234 VEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLL 293
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
I+MY+KCG++ SAR +FD + +++ +SWT+MI+GY G EAL LF M P+
Sbjct: 294 ITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNG 353
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T+ +++S C G+L +G+ + Y GL+ + V +LI MYSKCGSI ARE+F
Sbjct: 354 ATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFER 413
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEK 478
+ +K + WT+MI A++G EA+ LFH+M + + P+ + + +V AC+H+G +E+
Sbjct: 414 VTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEE 473
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G YF M K + + P + H +C+ DLLGR G+L AL+ +Q MP A +WG LL AC
Sbjct: 474 GLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSAC 533
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
+IH N+E+GE RL + P S+ YV MAN+Y G+W +R M + K G
Sbjct: 534 RIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESG 593
Query: 599 QSLVHINGKTCTFTV 613
S V + TF V
Sbjct: 594 WSQVEVTDTYHTFAV 608
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/626 (34%), Positives = 324/626 (51%), Gaps = 74/626 (11%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA-KLSDFLYSQMIHGHI 80
WN+ +R + N A KALLL++ M KN++ P+N T+P + +ACA +L +F + IH H+
Sbjct: 109 WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEF-GGKEIHDHV 167
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K F SD++VQ T+++MYA C + A KLFD+ P D SWN+++ G+ + G +E+
Sbjct: 168 LKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAK 227
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M I A N+ I
Sbjct: 228 LIFDQMPQRNIVAS---------------------------------------NSMIVLL 248
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
K + A +F ++E + +VSW+++I G ++++L + M +G R D
Sbjct: 249 GKMGQVMEAWKLFNEMDE--KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVV 306
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS---------------- 304
VVS+LS+C + G+++H I G + V++ N LI MYS
Sbjct: 307 VVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSH 366
Query: 305 ---------------KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
KCG ++ AR LFD M ++ VSW+A+ISGYAQ E L LF
Sbjct: 367 NLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHE 426
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M+ PD ++S+IS C AL+ GKW Y GLK NV++ L+DMY KCG
Sbjct: 427 MQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGC 486
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ +A E+F + EK V SW +I G A+NG +LD+F +M + PN +TF+ VL A
Sbjct: 487 VENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGA 546
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
C H G +++G +F M + + + P + HY CM DLLGR G L EA ++SMP+ D
Sbjct: 547 CRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVA 606
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
WG LL ACK H + E+GE V +L EL+P +V ++NI+A G W+ V +R MMK
Sbjct: 607 TWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMK 666
Query: 590 RNQVKKFPGQSLVHINGKTCTFTVED 615
+ V K PG SL+ NG F D
Sbjct: 667 QQGVVKTPGCSLIEANGVVHEFLAGD 692
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 229/522 (43%), Gaps = 93/522 (17%)
Query: 64 CAKLSDF--LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD--RLDCAYKLFDKMPDRD 119
C L F + SQMI + F SD F + ++ LD + ++FD++ + +
Sbjct: 51 CHNLKQFNRILSQMI-----LTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSN 105
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL----K 175
WN M+ + Q EK L L+ M + D T + QA + LL K
Sbjct: 106 GFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA----VRLLEFGGK 161
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+H + +G D+DV V NT I+ YA C +++ A +F E + VSWNSI+ G
Sbjct: 162 EIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFD--ESPVLDSVSWNSILAGYVK 219
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+++ +I+D P V S
Sbjct: 220 KGDVEEA-----KLIFDQM-PQRNIVAS-------------------------------- 241
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N++I + K G + A LF+ M ++ VSW+A+ISGY Q G +EAL +F M A G
Sbjct: 242 -NSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM 300
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS---------- 405
D V V+S++S C ++ GK G++ V + NALI MYS
Sbjct: 301 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQK 360
Query: 406 ---------------------KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
KCGS+ AR LF +PEK +VSW+ +I+G A + F E
Sbjct: 361 LFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSET 420
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMA 503
L LFH+M +RP+ ++V+ ACTH L++G W + + +VN L + +
Sbjct: 421 LALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILG--TTLL 478
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
D+ + G ++ AL+ M K + W L+ ++ +E
Sbjct: 479 DMYMKCGCVENALEVFNGMEEKGVSS-WNALIIGLAVNGLVE 519
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 15/227 (6%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W++ I + + L LF M+ I P+ + AC L+ + +H
Sbjct: 401 IVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHA 460
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+I K+ ++ + TT++DMY KC ++ A ++F+ M ++ V+SWNA+I+G A G +E+
Sbjct: 461 YIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVER 520
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAK-------HLSLLKSVHSFGIHIGVDADVS 191
L +F M+ G+ + +T MG+ A H H + + H G++ +V
Sbjct: 521 SLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKH------GIEPNVK 574
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC-TYGD 237
+ + L AE + + V +W +++G C +GD
Sbjct: 575 HYGCMVDLLGRAGLLNEAEKLIESMPMA-PDVATWGALLGACKKHGD 620
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/587 (36%), Positives = 319/587 (54%), Gaps = 6/587 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKN----DIEPNNLTFPFIAKACAKLSDFLYSQMI 76
WNS I + +A LF M + + ++ T + KAC L + +
Sbjct: 109 SWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCV 168
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG+ VK F SD+FV + V MY KC LD A FD++ ++D+ +WN MI G+AQ +
Sbjct: 169 HGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYE 228
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E+ + LFY M L G + + T + +A+ ++ + H+ + +G DV V
Sbjct: 229 EEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATAL 288
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+K D++ E F E R +VS+N++I G + K++++L Y + +G P
Sbjct: 289 VDMYSKFYDIEDVERAFG--EMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEP 346
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T V L SSC + +G VH H + +G D DVSV N++++ YSKCG DSA F
Sbjct: 347 DSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAF 406
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + V W +ISG+AQ G+ ++AL F M + D + S+I A+E
Sbjct: 407 ESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVE 466
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ + GL + V +A+IDMYSKCG + DA+++F +PEK VVSW +MI G A
Sbjct: 467 QGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYA 526
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
NG EAL LF +M + P VTF+ +L AC+HAG +E+G ++NLM Y + P +
Sbjct: 527 QNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSM 586
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
H +CM DLLGR G L+EA F+ S + GIWG+LL AC +H+N ++G A
Sbjct: 587 EHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLF 646
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
LEPH ++ Y ++NIYA W V+ +R +MK V+K PG S +
Sbjct: 647 LEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 264/519 (50%), Gaps = 17/519 (3%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ + +W S+I + + +AL F +M + IEPN +T+ ACA+ + + +
Sbjct: 4 TNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSL 63
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+K F + +FV + ++ MY+K DR+ A LFD MP+RD SWN+MI G++Q G
Sbjct: 64 HCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLN 123
Query: 137 EKVLCLFYNM-------RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
E+ LF +M +L + +DF T+ + +A + K VH + + IG D+D
Sbjct: 124 EEACGLFCSMINSCENWKL--LVSDF-TLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V + + Y KC L MA L F IE + +V+WN++I G ++++ + M
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIEN--KDIVAWNTMITGYAQNCYEEEAIELFYQM 238
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+GF+P+ TT +L + GR H+ + G +DV V L+ MYSK DI
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ F M R VS+ A+I+GY+ G +EALR++ +++ G PD T + + S C
Sbjct: 299 EDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC 358
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
S + G ++ GL +V V N++++ YSKCG A E F ++ V W
Sbjct: 359 SVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWA 418
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I+G A NGE +AL F +M + + + + +V++A + +E+G +L V
Sbjct: 419 GIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGR---HLHAHV 475
Query: 490 YQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKS 526
+ + Y S + D+ + G +++A MP K+
Sbjct: 476 MKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKN 514
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 191/396 (48%), Gaps = 12/396 (3%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
M + +V W + I A+ G +++ L F M GI+ + +T A + SL
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
S+H + G + V + IS Y+K + +K A +F + E R VSWNS+I G +
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPE--RDDVSWNSMIAGYS 118
Query: 235 YGDKFDDSLNFYRHMIY--DGFRPDVT--TVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+++ + MI + ++ V+ T+ ++L +C G+ VH + + GFD
Sbjct: 119 QRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFD 178
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+ V + + MY KCG +D A FD + ++ V+W MI+GYAQ +EA+ LF+ M
Sbjct: 179 SDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQM 238
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
E G P+ T ++ +G+ F G +V V AL+DMYSK I
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
D F + ++ +VS+ +I G +L G++ EAL ++ Q+ + P+ TF+ + +C
Sbjct: 299 EDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC 358
Query: 471 THAGFLEKGWGY------FNLMTKVYQVNPELNHYS 500
+ + + +G F L + V N +N YS
Sbjct: 359 SVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYS 394
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/658 (34%), Positives = 339/658 (51%), Gaps = 56/658 (8%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
PP +Y WNS IR D A+K L LF M P+N TFPF+ KAC
Sbjct: 85 FPPSDAGVY------HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACG 138
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
++S + H + + F S++FV +V MY++C L A K+FD+M DV SWN+
Sbjct: 139 EISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNS 198
Query: 126 MIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
+I +A++G + L +F M G + D +T++ + SL K +H F +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
+ ++ V N + YAKC + A VF + ++ VVSWN+++ G + +F+D++
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS--VKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 245 FY-----------------------------------RHMIYDGFRPDVTTVVSLLSSCV 269
+ R M+ G +P+ T++S+LS C
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 270 CPEALVQGRLVHSHGIHYGFDL-------DVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
AL+ G+ +H + I Y DL + VIN LI MY+KC +D+AR +FD + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 323 TR--VSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG 378
R V+WT MI GY+Q GD ++AL L M E P+ T+ + C AL +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 379 KWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
K YA + V N LIDMY+KCGSI DAR +F + K V+WT+++ G +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL +F +M + + + VT L VL AC+H+G +++G YFN M V+ V+P
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ DLLGR G+L AL ++ MP++ +W L C+IH +E+GEY A ++ EL
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y ++N+YA GRW V +R++M+ VKK PG S V T TF V D
Sbjct: 677 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGD 734
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 239/536 (44%), Gaps = 57/536 (10%)
Query: 55 LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK 114
+T PFI K C +S ++IH ++ + + + + ++ Y L A L +
Sbjct: 30 ITPPFIHK-CKTISQV---KLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRR 84
Query: 115 MPDRD--VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
P D V WN++I + G K L LF M + D T + +A +
Sbjct: 85 FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+S H+ + G ++V V N ++ Y++C L A VF E + VVSWNSII
Sbjct: 145 CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFD--EMSVWDVVSWNSIIES 202
Query: 233 CTYGDKFDDSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
K +L + M + G RPD T+V++L C G+ +H +
Sbjct: 203 YAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ 262
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
++ V N L+ MY+KCG +D A +F M + VSW AM++GY+Q G ++A+RLF M+
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 352 -----------------------------------AAGEVPDLVTVLSMISGCGQSGALE 376
++G P+ VT++S++SGC GAL
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 377 LGKWFDNYAC-------SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVS 427
GK YA G D MV N LIDMY+KC + AR +F +L E+ VV+
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELD--LRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
WT MI G + +G+ +AL+L +M E D RPN T L AC L G
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY 502
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ Q L +C+ D+ + G + +A +M K++ W +L+ +H
Sbjct: 503 ALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTGYGMH 557
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/600 (35%), Positives = 329/600 (54%), Gaps = 8/600 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + + N +ALL F M +N PN F +AC+ I G ++
Sbjct: 136 WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVI 195
Query: 82 KSPFW-SDIFVQTTMVDMYAKC-DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K+ + SD+ V ++DM+ K L A+K+F+KMP+R+ +W MI Q G+ +
Sbjct: 196 KTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEA 255
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF +M G + D T+ G+ A + + L L + +HS I G+ D V I+
Sbjct: 256 IDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINM 315
Query: 200 YAKCN---DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD-SLNFYRHMIYDGFR 255
YAKC+ + A +F I + V SW ++I G +D+ +L+ +R MI
Sbjct: 316 YAKCSVDGSMCAARKIFDQILD--HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T S L +C AL G V +H + GF V N+LISMY++ G ID AR
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + ++ +S+ +I YA+ + +EAL LF +E G T S++SG G +
Sbjct: 434 FDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTI 493
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ GLK N VCNALI MYS+CG+I A ++F + ++ V+SWT++I G
Sbjct: 494 GKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGF 553
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G +AL+LFH+M+E +RPN VT++AVL AC+H G + +GW +F M + V P
Sbjct: 554 AKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPR 613
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HY+C+ D+LGR G L EA+ F+ SMP K+DA +W T L AC++H N+E+G++ A +
Sbjct: 614 MEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMII 673
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
E EPH A Y+ ++N+YA +WD V+N+R MK + K G S V + K F V D
Sbjct: 674 EQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGD 733
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 246/514 (47%), Gaps = 18/514 (3%)
Query: 20 NQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
N ++ + ++ HKA+ M P+ T+ K C + F ++H
Sbjct: 32 NPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEK 91
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM-PDRDVASWNAMIVGFA--QMGFL 136
+ +S D +++ +Y+KC + + A +F M RD+ SW+AM+ FA MGF
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGF- 150
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNT 195
+ L F +M G + T+A A+ +S+ S+ F I G + +DV V
Sbjct: 151 -RALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCG 209
Query: 196 WISAYAKCN-DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I + K DL A VF + E R V+W +I ++++ + MI+ G+
Sbjct: 210 LIDMFVKGRGDLVSAFKVFEKMPE--RNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGY 267
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---GDIDS 311
PD T+ ++S+C E L+ G+ +HS I +G LD V LI+MY+KC G + +
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR +FD + D SWTAMI+GY QKG D EAL LF M +P+ T S + C
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
AL +G+ +A G V N+LI MY++ G I DAR+ F L EK ++S+ T
Sbjct: 388 NLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNT 447
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I A N EAL+LF+++ + + + TF ++L G + KG + +V
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE---QIHARVI 504
Query: 491 QVNPELNHYSCMA--DLLGRKGKLKEALDFVQSM 522
+ +LN C A + R G ++ A + M
Sbjct: 505 KSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 323/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + + +A+ L+++M+ ++P +TF + ACA S + +MIH I+
Sbjct: 399 WNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S S+ + +++MY +C L A +F+ RDV SWN+MI G AQ G E
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ ++ D +T + + + L L K +H G+ DV++ N I+ Y
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYI 578
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L+ A VF ++ R V+SW ++IGGC + ++ + M +GFRP +T
Sbjct: 579 RCGSLQDARNVFHSLQH--RDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTF 636
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L C L +G+ V ++ ++ G++LD V N LIS YSK G + AR +FD M
Sbjct: 637 SSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPS 696
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW +I+GYAQ G A+ + M+ VP+ + +S+++ C ALE GK
Sbjct: 697 RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRV 756
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L+ +V V ALI MY+KCGS G+A+E+F + EK VV+W MI A +G
Sbjct: 757 HAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLA 816
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL F+ M + ++P+ TF ++L AC HAG + +G+ F+ M Y V P + HY C
Sbjct: 817 SKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGC 876
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ LLGR + +EA + MP DA +W TLL AC+IH NI + E+ A +L +
Sbjct: 877 LVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARN 936
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A Y+ ++N+YA GRWD VA +R +M+ ++K PG+S + ++ F D
Sbjct: 937 PAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAAD 990
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 170/518 (32%), Positives = 272/518 (52%), Gaps = 6/518 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + KA LF M+ PN +T+ I AC ++ + IH I+
Sbjct: 96 WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQII 155
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ + D VQ +++ MY KC L A ++F + RDV S+N M+ +AQ ++++ L
Sbjct: 156 KAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLG 215
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI D VT + L A L K +H + G+++D+ V ++
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C D+ A+ F+G + R VV +N++I +G + +YR M DG + TT
Sbjct: 276 RCGDVDSAKQAFKGTAD--RDVVVYNALIAALAQHGHNVEAFEQYYR-MRSDGVALNRTT 332
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+S+L++C +AL G+L+HSH G DV + N LISMY++CGD+ AR LF M
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP 392
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R +SW A+I+GYA++ D EA+RL+ M++ G P VT L ++S C S A GK
Sbjct: 393 KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKM 452
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G+K N + NAL++MY +CGS+ +A+ +F + V+SW +MIAG A +G
Sbjct: 453 IHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+ A LF +M +L P+ +TF +VL C + LE G +T+ + ++N +
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGN 571
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ ++ R G L++A + S+ + D W ++ C
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC 608
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 165/532 (31%), Positives = 272/532 (51%), Gaps = 9/532 (1%)
Query: 8 PRLNKIY---RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
PR +++ + +N+ + K + L LF +M I P+ +T+ + A
Sbjct: 180 PRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
S + IH V+ SDI V T +V M +C +D A + F DRDV +N
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYN 299
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
A+I AQ G + +Y MR G+ + T + + A +K L K +HS
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G +DV + N IS YA+C DL A +F + + R ++SWN+II G + +++
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPK--RDLISWNAIIAGYARREDRGEAMR 417
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
Y+ M +G +P T + LLS+C A G+++H + G + + N L++MY
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
+CG + A+ +F+G R +SW +MI+G+AQ G + A +LF M+ PD +T S
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++SGC ALELGK GL+ +V + NALI+MY +CGS+ DAR +F++L +
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRD 597
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
V+SWT MI GCA GE ++A++LF QM RP + TF ++L+ CT + L++G
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIA 657
Query: 485 -LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ Y+++ + + + + G + +A + MP + D W ++
Sbjct: 658 YILNSGYELDTGVG--NALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKII 706
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 264/516 (51%), Gaps = 16/516 (3%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
E T+ + + C + ++ IH +V++ DIF+ +++MY KC + A++
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+F +MP RDV SWN++I +AQ GF +K LF M+ G + +T + + A
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L K +HS I G D V N+ +S Y KC DL A VF GI R VVS+N+++
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP--RDVVSYNTML 201
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + L + M +G PD T ++LL + P L +G+ +H + G +
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+ V L++M +CGD+DSA+ F G DR V + A+I+ AQ G EA ++ M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G + T LS+++ C S ALE GK ++ G +V + NALI MY++CG +
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
ARELFY +P++ ++SW +IAG A + EA+ L+ QM ++P RVTFL +L AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 471 THAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
++ G + +++ + N L + + ++ R G L EA + + + D
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHL--ANALMNMYRRCGSLMEAQNVFEGTQAR-DVI 498
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLF------ELEP 559
W +++ H + E AY+LF ELEP
Sbjct: 499 SWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEP 530
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 240/443 (54%), Gaps = 2/443 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A + RM+ + + N T+ I AC+ ++IH HI + SD+ + ++
Sbjct: 313 EAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALI 372
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MYA+C L A +LF MP RD+ SWNA+I G+A+ + + L+ M+ G++ V
Sbjct: 373 SMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRV 432
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + L A ++ + K +H + G+ ++ + N ++ Y +C L A+ VF G
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ R V+SWNS+I G ++ + ++ M + PD T S+LS C PEAL
Sbjct: 493 Q--ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ +H G LDV++ N LI+MY +CG + AR +F + R +SWTAMI G A
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD 610
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+G+ +A+ LF+ M+ G P T S++ C S L+ GK Y + G + + V
Sbjct: 611 QGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGV 670
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
NALI YSK GS+ DARE+F +P + +VSW +IAG A NG A++ +QM E D+
Sbjct: 671 GNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDV 730
Query: 457 RPNRVTFLAVLQACTHAGFLEKG 479
PN+ +F+++L AC+ LE+G
Sbjct: 731 VPNKFSFVSLLNACSSFSALEEG 753
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 145/380 (38%), Gaps = 60/380 (15%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S I WN I A+ +M++ D+ PN +F + AC+ S +
Sbjct: 696 SRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKR 755
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H IVK D+ V ++ MYAKC A ++FD + +++V +WNAMI +AQ G
Sbjct: 756 VHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGL 815
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
K L F M GI+ D T + A HA + + + I ++++ V
Sbjct: 816 ASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLV-----LEGYQIFSSMESEYGV--- 867
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
L T+ + ++G +F ++ M F
Sbjct: 868 ------------------------LPTIEHYGCLVGLLGRARRFQEAETLINQM---PFP 900
Query: 256 PDVTTVVSLLSSCVCPEALVQGRL-VHSHGIHYGFDLDV---SVINTLISMYSKCG---D 308
PD +LL +C + G + + H + L+ +V L ++Y+ G D
Sbjct: 901 PDAAVWETLLGAC-----RIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDD 955
Query: 309 IDSARFLFDGMCDRTRV--SW----------TAMISGYAQKGDL-DEALRLFFAMEAAGE 355
+ R + +G R SW A + + ++ E RL ME AG
Sbjct: 956 VAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGY 1015
Query: 356 VPDLVTVLSMISGCGQSGAL 375
PD VL + Q +L
Sbjct: 1016 FPDTQHVLHDLGKAHQETSL 1035
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 326/596 (54%), Gaps = 11/596 (1%)
Query: 29 AVDKNE--AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFW 86
+VD N+ A + L LFR ++ + +T + K C ++ +HG+ +K
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 215
Query: 87 SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM 146
D+FV +V++Y+KC R+ A LFD M +RDV WN M+ G+ Q+G ++ LF
Sbjct: 216 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 275
Query: 147 RLVGIQADFVTVMGLTQAAIHA--KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
G++ D +V + + A L L K VH + G+D+DVSV N+ ++ Y+K
Sbjct: 276 HRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 335
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSL 264
A VF ++ ++SWNS+I C ++S+N + ++++G +PD T+ S+
Sbjct: 336 CAYFAREVFNDMKH--LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASI 393
Query: 265 L-----SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+C C L QG+ +H+H I GFD D+ V + ++ MY KCGD+ +A +F+ +
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI 453
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
V+WT+MISG G+ D+ALR++ M + +PD T ++I ALE G+
Sbjct: 454 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGR 513
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ V +L+DMY+KCG+I DA LF + + + W M+ G A +G
Sbjct: 514 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHG 573
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EA++LF M + P+RV+F+ +L AC+HAG + + Y + M Y + PE+ HY
Sbjct: 574 NAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHY 633
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
SC+ D LGR G ++EA +++MP K+ A I LL AC+I ++E G+ VA RLF LEP
Sbjct: 634 SCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEP 693
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++NIYA RWD V + R MMKR VKK PG S + + F V+D
Sbjct: 694 FDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDD 749
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 251/509 (49%), Gaps = 21/509 (4%)
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ L + H IV S D F+ ++ MY+KC L A ++FD P+RD+ +WNA++
Sbjct: 92 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 151
Query: 129 GFAQM-----GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
+A G ++ L LF +R +T+ + + +++ L + VH + I
Sbjct: 152 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 211
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
IG++ DV V ++ Y+KC ++ A L+F + E R VV WN ++ G ++
Sbjct: 212 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRE--RDVVLWNMMLKGYVQLGLEKEAF 269
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCV--CPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ G RPD +V +L+ C+ + L G+ VH + G D DVSV N+L++
Sbjct: 270 QLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 329
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSK G AR +F+ M +SW +MIS AQ +E++ LF + G PD T
Sbjct: 330 MYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFT 389
Query: 362 VLSMI-----SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
+ S+ CG L+ GK +A G ++ V + ++DMY KCG + +A +
Sbjct: 390 LASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIV 449
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F + V+WT+MI+GC NG +AL ++H+M + + P+ TF +++A + L
Sbjct: 450 FNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTAL 509
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
E+G + K+ V+ S + D+ + G +++A + M +++ A +W +L
Sbjct: 510 EQGRQLHANVIKLDCVSDPFVGTS-LVDMYAKCGNIEDAYRLFKKMNVRNIA-LWNAMLV 567
Query: 537 ACKIHRNIEIGEYVAYRLFE-LEPHSAAP 564
H N E A LF+ ++ H P
Sbjct: 568 GLAQHGNAE----EAVNLFKSMKSHGIEP 592
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 121/253 (47%), Gaps = 13/253 (5%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
LL + + L+ G+ H+ + G D + N L++MYSKCG + SAR +FD +R
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 324 RVSWTAMISGYA-----QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
V+W A++ YA G+ E L LF + A+ +T+ ++ C SG L
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ YA GL+ +V V AL+++YSKCG + DAR LF + E+ VV W M+ G
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF--LEKGWGYFNLMTK------VY 490
G EA LF + LRP+ + +L C AG LE G + K V
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322
Query: 491 QVNPELNHYSCMA 503
N +N YS M
Sbjct: 323 VANSLVNMYSKMG 335
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC--AK 66
RL K I WN+ + A +A+ LF+ MK + IEP+ ++F I AC A
Sbjct: 549 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 608
Query: 67 LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
L+ Y + +H +I + +VD + + A K+ + MP + AS N
Sbjct: 609 LTSEAY-EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRA 667
Query: 127 IVG 129
++G
Sbjct: 668 LLG 670
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/596 (36%), Positives = 324/596 (54%), Gaps = 4/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I V A AL LF M ++ + +AC +L D + +H H +
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 179
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS SD+ VQ +V MY+K +D + LF+++ D+D+ SW ++I GFAQ GF + L
Sbjct: 180 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M + G G A A + +H I +D D+ V + Y
Sbjct: 240 VFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 299
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A+ +L A + F IE +VSWNSI+ + ++L + M G RPD T
Sbjct: 300 ARFKNLDSARVAFYRIEA--PDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGIT 357
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V LL +CV +AL GRL+HS+ + G D DVSV N+L+SMY++C D+ SA +F +
Sbjct: 358 VRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK 417
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
D+ V+W ++++ AQ +E L+LF + + D +++ +++S + G E+ K
Sbjct: 418 DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 477
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCALNG 439
YA GL D+ M+ N LID Y+KCGS+ DA LF + + V SW+++I G A G
Sbjct: 478 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 537
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EALDLF +M L +RPN VTF+ VL AC+ GF+ +G Y+++M Y + P H
Sbjct: 538 YAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 597
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
SC+ DLL R GKL EA +F+ MP + D +W TLL A K+H ++E+G+ A + ++P
Sbjct: 598 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 657
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV + NIYA G W+ A L+ M+ + VKK PG+S V + G+ F VED
Sbjct: 658 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVED 713
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 227/487 (46%), Gaps = 11/487 (2%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWS-------DIFVQTTMVDMYAKCDRLDCAY 109
+ + AC++L + +H H+V S S + + ++ MY +C D A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
++FD+MP R+ SW ++I Q G L LF +M G AD + +A
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ + VH+ + +D+ V N ++ Y+K + ++F I++ + ++SW SI
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD--KDLISWGSI 224
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
I G ++L +R MI +G P+ S +C + G +H I Y
Sbjct: 225 IAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYR 284
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
D D+ V +L MY++ ++DSAR F + VSW ++++ Y+ +G L EAL LF
Sbjct: 285 LDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFS 344
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M +G PD +TV ++ C AL G+ +Y GL +V VCN+L+ MY++C
Sbjct: 345 EMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCS 404
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ A ++F+ + ++ VV+W +++ CA + E L LF + + + +R++ VL
Sbjct: 405 DLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 464
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
A G+ E K V+ + + + D + G L +A+ + M D
Sbjct: 465 ASAELGYFEMVKQVHAYAFKAGLVDDRMLS-NTLIDTYAKCGSLDDAMRLFEIMGNNRDV 523
Query: 529 GIWGTLL 535
W +L+
Sbjct: 524 FSWSSLI 530
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 167/353 (47%), Gaps = 5/353 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ Y +C A VF E R VSW S+I + D+L + M+ G
Sbjct: 90 NHLITMYGRCAAPDSARQVFD--EMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSG 147
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D + S + +C + GR VH+H + D+ V N L++MYSK G +D
Sbjct: 148 TAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGF 207
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGCGQS 372
LF+ + D+ +SW ++I+G+AQ+G EAL++F M G P+ S CG
Sbjct: 208 MLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAV 267
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G+ E G+ + L ++ V +L DMY++ ++ AR FY + +VSW +++
Sbjct: 268 GSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIV 327
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
++ G EAL LF +M + LRP+ +T +L AC L G + + K+ +
Sbjct: 328 NAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL-GL 386
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ +++ + + + R L A+D + D W ++L AC H + E
Sbjct: 387 DGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPE 438
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/593 (36%), Positives = 334/593 (56%), Gaps = 9/593 (1%)
Query: 22 WNSQIREAVDKNEAHKAL-LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V H+A+ ++ + ++I P+ TFP + KAC L D + IH
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWA 241
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K F ++FV +++ MY++ A LFD MP RD+ SWNAMI G Q G + L
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+ MRL GI+ +FVTV+ + +S +H + I G++ D+ V N I+ Y
Sbjct: 302 DVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMY 361
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK +L+ A F+ + + VVSWNSII D + F+ M +GF+PD+ T
Sbjct: 362 AKFGNLEDARKAFQ--QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGM 319
+VSL S R VH + G+ + DV + N ++ MY+K G +DSA +F+ +
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
+ +SW +I+GYAQ G EA+ ++ ME E+ P+ T +S++ GAL+ G
Sbjct: 480 LVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
L +V V LID+Y KCG + DA LFY +P+++ V+W +I+ ++
Sbjct: 540 MRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G + L LF +M++ ++P+ VTF+++L AC+H+GF+E+G F LM + Y + P L H
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKH 658
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM DLLGR G L+ A F++ MP++ DA IWG LL AC+IH NIE+G++ + RLFE++
Sbjct: 659 YGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+ YV ++NIYA G+W+GV +R++ + +KK PG S + +N K F
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVF 771
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 246/479 (51%), Gaps = 14/479 (2%)
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+++ +H +V + IF+ T +V++YA + + FD++P +DV +WN+MI +
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 132 QMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
G + + FY + LV I+ DF T + +A L + +H + +G +V
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGTLVDGRRIHCWAFKLGFQWNV 250
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V + I Y++ +A +F + R + SWN++I G +L+ M
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALDVLDEMR 308
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G + + TVVS+L C + L+H + I +G + D+ V N LI+MY+K G+++
Sbjct: 309 LEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLE 368
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR F M VSW ++I+ Y Q D A F M+ G PDL+T++S+ S
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 371 QSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
QS + + + G L ++V++ NA++DMY+K G + A ++F + K V+SW
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWN 488
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T+I G A NG EA++++ M E ++ PN+ T++++L A H G L++G + +
Sbjct: 489 TLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG---MRIHGR 545
Query: 489 VYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
V + N L+ + +C+ D+ G+ G+L +A+ +P +S W ++ IH + E
Sbjct: 546 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAE 603
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 201/424 (47%), Gaps = 5/424 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ I + A +AL + M+ I+ N +T I C +L D + +IH
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++K D+FV +++MYAK L+ A K F +M DV SWN++I + Q
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVT 400
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 197
F M+L G Q D +T++ L ++ +SVH F + G + DV + N +
Sbjct: 401 AHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY-DGFRP 256
YAK L A VF I ++ V+SWN++I G +++ Y+ M P
Sbjct: 461 DMYAKLGLLDSAHKVFEIIL--VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T VS+L + AL QG +H I LDV V LI +Y KCG + A LF
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + V+W A+IS + G ++ L+LF M G PD VT +S++S C SG +E
Sbjct: 579 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 638
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
GKW G+K ++ ++D+ + G + A +P + S W ++ C
Sbjct: 639 EGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGAC 698
Query: 436 ALNG 439
++G
Sbjct: 699 RIHG 702
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 328/600 (54%), Gaps = 12/600 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I +A+ A++++ +M ++ P+ LTF + KAC D + +H H++
Sbjct: 228 WTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVI 287
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F + Q ++ MY +++ A +F ++P +D+ SW MI G+ Q+G+ + L
Sbjct: 288 KSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALY 347
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVH----SFGIHIGVDADVSVCNTW 196
LF ++ G + G +A + L K VH FG+ V A S+C+
Sbjct: 348 LFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDM- 406
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
YAK L A++ F I+ +VSWN+II +++++F+R MI+ G P
Sbjct: 407 ---YAKFGFLPSAKMAFCQIKNP--DIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTP 461
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T +SLL +C P L QGR +HS+ + GFD +++V N+L++MY+KC + A +F
Sbjct: 462 DSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVF 521
Query: 317 DGMCDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ VSW A++S QK E RL+ M +G PD +T+ +++ C + +L
Sbjct: 522 RDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSL 581
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+G Y+ GL +V VCN LIDMY+KCGS+ AR++F + +VSW+++I G
Sbjct: 582 GVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGY 641
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A G EAL+LF M L ++PN VT+L L AC+H G +E+GW + M + + P
Sbjct: 642 AQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPT 701
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
H+SC+ DLL R G L EA F+Q + +D W TLL ACK H N++I E A +
Sbjct: 702 REHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNIL 761
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+L+P ++A V + NI+A G W+ VA LR +MK+ V+K PGQS + + K F ED
Sbjct: 762 KLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSED 821
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 210/439 (47%), Gaps = 6/439 (1%)
Query: 34 EAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQT 93
EA +A + + EP+ T+ + ACA Y++ IH H++KS + I +Q
Sbjct: 141 EALEAFDFHLKNSNSHFEPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQN 198
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
M++MY KC + A K+FD M +V SW +MI G++Q G + ++ M G
Sbjct: 199 HMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFP 258
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D +T + +A A + L + +H+ I ++ N IS Y ++ A VF
Sbjct: 259 DQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVF 318
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPE 272
I + ++SW ++I G ++L +R ++ G ++P+ S+ S+C
Sbjct: 319 TRIPT--KDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLL 376
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
L G+ VH + +G +V +L MY+K G + SA+ F + + VSW A+I+
Sbjct: 377 ELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIA 436
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
+A GD +EA+ F M G PD +T +S++ CG L G+ +Y G
Sbjct: 437 AFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDK 496
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ VCN+L+ MY+KC + DA +F + +VSW +++ C + E L+ +M
Sbjct: 497 EITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEM 556
Query: 452 MELDLRPNRVTFLAVLQAC 470
+P+ +T +L C
Sbjct: 557 HFSGNKPDSITITTLLGTC 575
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 167/356 (46%), Gaps = 40/356 (11%)
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++ +F+ F P +T SL+ +C +L + +H H + + + + N +I
Sbjct: 144 EAFDFHLKNSNSHFEP--STYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMI 201
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
+MY KCG + AR +FD M VSWT+MISGY+Q G ++A+ ++ M +G+ PD +
Sbjct: 202 NMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQL 261
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T S+I C +G ++LG+ + ++ NALI MY+ G I A +F +
Sbjct: 262 TFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRI 321
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKG 479
P K ++SW TMI G G VEAL LF ++ + +PN F +V AC+ LE G
Sbjct: 322 PTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYG 381
Query: 480 WGY------FNLMTKVY-----------------------QV-NPELNHYSCMADLLGRK 509
F L V+ Q+ NP++ ++ +
Sbjct: 382 KQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADN 441
Query: 510 GKLKEALDFVQSM---PIKSDAGIWGTLLCAC----KIHRNIEIGEYVAYRLFELE 558
G EA+DF + M + D+ + +LLC C ++++ +I Y+ F+ E
Sbjct: 442 GDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKE 497
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 5/334 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
++ I WN+ I D +A++A+ FR+M + P+++T+ + C +
Sbjct: 424 KNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGR 483
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF-DKMPDRDVASWNAMIVGFAQM 133
IH +IVK F +I V +++ MY KC L A +F D + ++ SWNA++ Q
Sbjct: 484 QIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQK 543
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L+ M G + D +T+ L L + VH + I G+ DVSVC
Sbjct: 544 KQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVC 603
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I YAKC LK A VF + +VSW+S+I G ++LN +R M G
Sbjct: 604 NGLIDMYAKCGSLKHARDVFDSTQN--LDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLG 661
Query: 254 FRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+P+ T + LS+C + +G RL S +G + ++ + ++ G + A
Sbjct: 662 VQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEA 721
Query: 313 R-FLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
F+ D +W +++ ++D A R
Sbjct: 722 ETFIQKSGLDADITAWKTLLAACKTHNNVDIAER 755
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 33/231 (14%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I R++ + WN+ + + K + + L++ M + +P+++T + CA+L+
Sbjct: 524 ISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGV 583
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+H + +KS D+ V ++DMYAKC L A +FD + D+ SW+++IVG+AQ
Sbjct: 584 GNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQ 643
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH-----------------------AK 169
G + L LF M +G+Q + VT +G A H +
Sbjct: 644 CGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTRE 703
Query: 170 HLS----------LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
H S L +F G+DAD++ T ++A N++ +AE
Sbjct: 704 HFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAE 754
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 330/598 (55%), Gaps = 2/598 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ V + +A+ LF M + I PN + + C L D + + IH
Sbjct: 75 SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIH 134
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+++K + SD F +VDMYAK L+ A +FD++ D+ SWNA+I G +
Sbjct: 135 GYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHH 194
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L L M G+ + T+ +A L + +HS I + + +D + I
Sbjct: 195 RALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLI 254
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KCN + A LVF+ + E R +++WN++I G + ++ +++ + + M +G +
Sbjct: 255 DMYSKCNSMDDARLVFKLMPE--RDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFN 312
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
TT+ ++L S +A R +H+ + GF+ D V+N+LI Y KCG ++ A +F+
Sbjct: 313 QTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFE 372
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
V +T++++ YAQ G +EALRL+ M+ G PD S+++ C A E
Sbjct: 373 ESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQ 432
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + G ++ N+L++MY+KCGSI DA F +P + +VSW+ MI G A
Sbjct: 433 GKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQ 492
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL LF QM+++ + PN +T ++VL AC HAG + + YFN M ++ + P
Sbjct: 493 HGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQE 552
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+CM DLLGR GKL+ A++ V MP +++A +WG LL A +IH+NI++GE A L L
Sbjct: 553 HYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLAL 612
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP + +V +ANIYA G WD VA +R +MK +VKK PG S + + K TF V D
Sbjct: 613 EPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGD 670
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 177/600 (29%), Positives = 266/600 (44%), Gaps = 73/600 (12%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
I+ N FP + KAC D + + +HG +V + F SD FV ++V +YAKC A
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LFD +PDR V SWNA+ + + + LF++M L GI+ + ++ + +
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ +H + I +G D+D N + YAK L+ A VF I + +VSWN+I
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK--PDIVSWNAI 183
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I GC + +L R M G P++ T+ S L +C GR +HS I
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D + LI MYSKC +D AR +F M +R ++W A+ISG++Q + +EA LF
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303
Query: 350 MEAAG---EVPDLVTVLSMISG------CGQSGALEL--GKWFDNYACSGGLKDNVMVCN 398
M G L TVL I+ C Q AL L G FDNY V N
Sbjct: 304 MHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNY-----------VVN 352
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LID Y KCG + DA +F P +V +T+++ A +G+ EAL L+ +M + ++P
Sbjct: 353 SLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKP 412
Query: 459 NRVTFLAVLQACTHAGFLEKGWGY------FNLMTKVYQVNPELNHY------------- 499
+ ++L AC E+G F M+ ++ N +N Y
Sbjct: 413 DSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAF 472
Query: 500 -----------SCMADLLGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCACKIHRNIE 545
S M L + G KEAL + M + + ++LCAC H +
Sbjct: 473 SRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACN-HAGL- 530
Query: 546 IGEYVAY-----RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
+ E Y LF +EP Y M ++ G+ + L V K P Q+
Sbjct: 531 VAEAKHYFNSMKILFGIEPMQ-EHYACMIDLLGRAGKLEAAMEL--------VNKMPFQA 581
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 210/445 (47%), Gaps = 35/445 (7%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
M L+GI+ + + +A K L L K VH + G D+D V N+ + YAKC
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
A +F I + R+VVSWN++ + D ++++ + M+ G RP+ ++ S++
Sbjct: 61 FGDARSLFDAIPD--RSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMI 118
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
+ C E VQGR +H + I G+D D N L+ MY+K G ++ A +FD + V
Sbjct: 119 NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV 178
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SW A+I+G AL L M +G P++ T+ S + C ELG+ +
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
+ + + LIDMYSKC S+ DAR +F +PE+ +++W +I+G + N E EA
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAA 298
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEKGWGYFNLM-------- 486
LF M + N+ T VL++ HA L+ G+ + N +
Sbjct: 299 SLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTY 358
Query: 487 ---------TKVYQVNP--ELNHYSCMADLLGRKGKLKEALDF---VQSMPIKSDAGIWG 532
T+V++ +P +L ++ + + G+ +EAL +Q IK D+ +
Sbjct: 359 GKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCS 418
Query: 533 TLLCACKIHRNIEIGEYVAYRLFEL 557
+LL AC E G+ V + +
Sbjct: 419 SLLNACASLSAYEQGKQVHVHILKF 443
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/601 (35%), Positives = 333/601 (55%), Gaps = 11/601 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ IR H A+ L+R M + + PN TFPF+ KAC+ L D + IH H
Sbjct: 68 YNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAA 127
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D+FV T ++D+Y +C R A +F KMP RDV +WNAM+ G+A G +
Sbjct: 128 AAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 187
Query: 142 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLK--SVHSFGIHIGVDAD---VSVCNT 195
+M+ G++ + T++ L + A+H +L + S+H++ + ++ + V +
Sbjct: 188 HLLDMQDHGGLRPNASTLVSLL--PLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTA 245
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF- 254
+ YAKC L A VF G+ +R V+W+++IGG D+ ++ N ++ M+ +G
Sbjct: 246 LLDMYAKCKQLVYACRVFHGMP--VRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLC 303
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
T+V S L C L G +H+ G D++ N+L+SMY+K G I+ A
Sbjct: 304 FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATM 363
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
FD + + +S+ A++SG Q G +EA +F M+A PD+ T++S+I C A
Sbjct: 364 FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA 423
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+ GK GL +CN+LIDMY+KCG I +R++F +P + VVSW TMIAG
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
++G EA LF M P+ VTF+ ++ AC+H+G + +G +F+ MT Y + P
Sbjct: 484 YGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILP 543
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HY CM DLL R G L EA F+QSMP+K+D +WG LL AC+IH+NI++G+ V+ +
Sbjct: 544 RMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRII 603
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
+L P +V ++NI++ GR+D A +R + K KK PG S + ING F
Sbjct: 604 QKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGG 663
Query: 615 D 615
D
Sbjct: 664 D 664
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 205/443 (46%), Gaps = 9/443 (2%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+L A ++FD++P D ++NA+I ++ +G + L+ +M + + T + +
Sbjct: 49 QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLK 108
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A L +++H+ G+ D+ V I Y +C A VF + +R V
Sbjct: 109 ACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP--MRDV 166
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+WN+++ G + ++ M + G RP+ +T+VSLL AL QG +H+
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226
Query: 283 HGIHYGFDLD---VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
+ + + + V + L+ MY+KC + A +F GM R V+W+A+I G+
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 340 LDEALRLFFAMEAAGE-VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ EA LF M G +V S + C L +G G+ ++ N
Sbjct: 287 MTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+L+ MY+K G I +A F + K +S+ +++GC NG+ EA +F +M ++ P
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ T ++++ AC+H L+ G + + + E + + + D+ + GK+ +
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVI-IRGLALETSICNSLIDMYAKCGKIDLSRQV 465
Query: 519 VQSMPIKSDAGIWGTLLCACKIH 541
MP + D W T++ IH
Sbjct: 466 FDKMPAR-DVVSWNTMIAGYGIH 487
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 7/237 (2%)
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + AR +FD + ++ A+I Y+ G A+ L+ +M P+ T ++
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C L G+ +A + GL ++ V ALID+Y +C G AR +F +P + VV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGY--F 483
+W M+AG A +G + A+ M + LRPN T +++L G L +G +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD----AGIWGTLLC 536
L + Q ++ + + D+ + +L A MP+++D A I G +LC
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLC 284
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + AR++F +P ++ +I + G F A+DL+ M+ + PN+ TF VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
+AC+ L G + ++ +L + + DL R + A + MP++ D
Sbjct: 108 KACSALVDLRAGR-TIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-D 165
Query: 528 AGIWGTLLCACKIH 541
W +L H
Sbjct: 166 VVAWNAMLAGYANH 179
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 333/602 (55%), Gaps = 6/602 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ QWN+ ++ + + + L F M +++ +P+N T P KAC +L + Y +MIH
Sbjct: 24 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 83
Query: 78 GHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
G + K SD++V ++++ MY KC R+ A ++FD++ D+ +W++M+ GF + G
Sbjct: 84 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP 143
Query: 137 EKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + F M + + D VT++ L A + L + VH F I G D+S+ N+
Sbjct: 144 YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 203
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAK K A +F+ I E + V+SW+++I ++L + M+ DG
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAE--KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+V TV+ +L +C L QGR H I G + +V V L+ MY KC + A +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGA 374
F + + VSW A+ISG+ G ++ F M PD + ++ ++ C + G
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LE K F +Y G N + +L+++YS+CGS+G+A ++F + K V WT++I G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 435 CALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
++G+ +AL+ F+ M++ +++PN VTFL++L AC+HAG + +G F LM Y++
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+ + DLLGR G L A++ + MP I GTLL AC+IH+N E+ E VA +
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 561
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LFELE + A Y+ M+N+Y + G W+ V LR +K+ +KK +SL+ I K F
Sbjct: 562 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 621
Query: 614 ED 615
+D
Sbjct: 622 DD 623
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 12/333 (3%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R++ WN+++ + ++++ L + HM D +PD T+ L +C + G ++
Sbjct: 23 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 82
Query: 281 H---SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
H + G DL V ++LI MY KCG + A +FD + V+W++M+SG+ +
Sbjct: 83 HGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 140
Query: 338 GDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +A+ F M A +V PD VT+++++S C + LG+ + G +++ +
Sbjct: 141 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 200
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N+L++ Y+K + +A LF + EK V+SW+T+IA NG EAL +F+ MM+
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
PN T L VLQAC A LE+G L + + E+ + + D+ + +EA
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 517 DFVQSMPIKSDAGIWGTLLCACKI----HRNIE 545
+P + D W L+ + HR+IE
Sbjct: 320 AVFSRIP-RKDVVSWVALISGFTLNGMAHRSIE 351
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 5/306 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L K+ + W++ I V A +ALL+F M + EPN T + +ACA D
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ H ++ +++ V T +VDMY KC + AY +F ++P +DV SW A+I G
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 130 FAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
F G + + F M L + D + ++ + + L K HS+ I G D+
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + + + Y++C L A VF GI L+ V W S+I G K +L + H
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGI--ALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 249 MIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKC 306
M+ +P+ T +S+LS+C + +G + ++ Y ++ L+ + +
Sbjct: 458 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRV 517
Query: 307 GDIDSA 312
GD+D+A
Sbjct: 518 GDLDTA 523
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR +F M R+ W ++ +++ +E L F M E PD T+ + CG+
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 372 SGALELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ G+ + L ++ V ++LI MY KCG + +A +F L + +V+W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 431 MIAGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACT-----------HAGFLEK 478
M++G NG +A++ F +M M D+ P+RVT + ++ ACT H + +
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G+ + VN LN Y+ + KEA++ + M + D W T++ AC
Sbjct: 193 GFS-----NDLSLVNSLLNCYA-------KSRAFKEAVNLFK-MIAEKDVISWSTVI-AC 238
Query: 539 KIH 541
+
Sbjct: 239 YVQ 241
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
K S DAR++F + ++++ W T++ + ++ E L F M + +P+ T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
L+AC + G + K + +L S + + + G++ EAL + K
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-K 124
Query: 526 SDAGIWGTLL 535
D W +++
Sbjct: 125 PDIVTWSSMV 134
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/601 (35%), Positives = 333/601 (55%), Gaps = 11/601 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ IR H A+ L+R M + + PN TFPF+ KAC+ L D + IH H
Sbjct: 68 YNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAA 127
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D+FV T ++D+Y +C R A +F KMP RDV +WNAM+ G+A G +
Sbjct: 128 AAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 187
Query: 142 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLK--SVHSFGIHIGVDAD---VSVCNT 195
+M+ G++ + T++ L + A+H +L + S+H++ + ++ + V +
Sbjct: 188 HLLDMQDHGGLRPNASTLVSLL--PLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTA 245
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF- 254
+ YAKC L A VF G+ +R V+W+++IGG D+ ++ N ++ M+ +G
Sbjct: 246 LLDMYAKCKQLVYACRVFHGMP--VRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLC 303
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
T+V S L C L G +H+ G D++ N+L+SMY+K G I+ A
Sbjct: 304 FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATM 363
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
FD + + +S+ A++SG Q G +EA +F M+A PD+ T++S+I C A
Sbjct: 364 FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA 423
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+ GK GL +CN+LIDMY+KCG I +R++F +P + VVSW TMIAG
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
++G EA LF M P+ VTF+ ++ AC+H+G + +G +F+ MT Y + P
Sbjct: 484 YGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILP 543
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HY CM DLL R G L EA F+QSMP+K+D +WG LL AC+IH+NI++G+ V+ +
Sbjct: 544 RMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRII 603
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
+L P +V ++NI++ GR+D A +R + K KK PG S + ING F
Sbjct: 604 QKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGG 663
Query: 615 D 615
D
Sbjct: 664 D 664
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 205/443 (46%), Gaps = 9/443 (2%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+L A ++FD++P D ++NA+I ++ +G + L+ +M + + T + +
Sbjct: 49 QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLK 108
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A L +++H+ G+ D+ V I Y +C A VF + +R V
Sbjct: 109 ACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP--MRDV 166
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+WN+++ G + ++ M + G RP+ +T+VSLL AL QG +H+
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226
Query: 283 HGIHYGFDLD---VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
+ + + + V + L+ MY+KC + A +F GM R V+W+A+I G+
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 340 LDEALRLFFAMEAAGE-VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ EA LF M G +V S + C L +G G+ ++ N
Sbjct: 287 MTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+L+ MY+K G I +A F + K +S+ +++GC NG+ EA +F +M ++ P
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ T ++++ AC+H L+ G + + + E + + + D+ + GK+ +
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVI-IRGLALETSICNSLIDMYAKCGKIDLSRQV 465
Query: 519 VQSMPIKSDAGIWGTLLCACKIH 541
MP + D W T++ IH
Sbjct: 466 FDKMPAR-DVVSWNTMIAGYGIH 487
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 7/237 (2%)
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + AR +FD + ++ A+I Y+ G A+ L+ +M P+ T ++
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C L G+ +A + GL ++ V ALID+Y +C G AR +F +P + VV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGY--F 483
+W M+AG A +G + A+ M + LRPN T +++L G L +G +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD----AGIWGTLLC 536
L + Q ++ + + D+ + +L A MP+++D A I G +LC
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLC 284
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + AR++F +P ++ +I + G F A+DL+ M+ + PN+ TF VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
+AC+ L G + ++ +L + + DL R + A + MP++ D
Sbjct: 108 KACSALVDLRAGR-TIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-D 165
Query: 528 AGIWGTLLCACKIH 541
W +L H
Sbjct: 166 VVAWNAMLAGYANH 179
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 333/602 (55%), Gaps = 6/602 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ QWN+ ++ + + + L F M +++ +P+N T P KAC +L + Y +MIH
Sbjct: 5 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 64
Query: 78 GHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
G + K SD++V ++++ MY KC R+ A ++FD++ D+ +W++M+ GF + G
Sbjct: 65 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP 124
Query: 137 EKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + F M + + D VT++ L A + L + VH F I G D+S+ N+
Sbjct: 125 YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 184
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAK K A +F+ I E + V+SW+++I ++L + M+ DG
Sbjct: 185 LLNCYAKSRAFKEAVNLFKMIAE--KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 242
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+V TV+ +L +C L QGR H I G + +V V L+ MY KC + A +
Sbjct: 243 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGA 374
F + + VSW A+ISG+ G ++ F M PD + ++ ++ C + G
Sbjct: 303 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 362
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LE K F +Y G N + +L+++YS+CGS+G+A ++F + K V WT++I G
Sbjct: 363 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 422
Query: 435 CALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
++G+ +AL+ F+ M++ +++PN VTFL++L AC+HAG + +G F LM Y++
Sbjct: 423 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 482
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+ + DLLGR G L A++ + MP I GTLL AC+IH+N E+ E VA +
Sbjct: 483 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 542
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LFELE + A Y+ M+N+Y + G W+ V LR +K+ +KK +SL+ I K F
Sbjct: 543 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 602
Query: 614 ED 615
+D
Sbjct: 603 DD 604
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 12/333 (3%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R++ WN+++ + ++++ L + HM D +PD T+ L +C + G ++
Sbjct: 4 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 63
Query: 281 H---SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
H + G DL V ++LI MY KCG + A +FD + V+W++M+SG+ +
Sbjct: 64 HGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 121
Query: 338 GDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +A+ F M A +V PD VT+++++S C + LG+ + G +++ +
Sbjct: 122 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 181
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N+L++ Y+K + +A LF + EK V+SW+T+IA NG EAL +F+ MM+
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 241
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
PN T L VLQAC A LE+G L + + E+ + + D+ + +EA
Sbjct: 242 EPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 517 DFVQSMPIKSDAGIWGTLLCACKI----HRNIE 545
+P + D W L+ + HR+IE
Sbjct: 301 AVFSRIP-RKDVVSWVALISGFTLNGMAHRSIE 332
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 5/306 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L K+ + W++ I V A +ALL+F M + EPN T + +ACA D
Sbjct: 201 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 260
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ H ++ +++ V T +VDMY KC + AY +F ++P +DV SW A+I G
Sbjct: 261 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 320
Query: 130 FAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
F G + + F M L + D + ++ + + L K HS+ I G D+
Sbjct: 321 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 380
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + + + Y++C L A VF GI L+ V W S+I G K +L + H
Sbjct: 381 NPFIGASLVELYSRCGSLGNASKVFNGI--ALKDTVVWTSLITGYGIHGKGTKALETFNH 438
Query: 249 MIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKC 306
M+ +P+ T +S+LS+C + +G + ++ Y ++ L+ + +
Sbjct: 439 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRV 498
Query: 307 GDIDSA 312
GD+D+A
Sbjct: 499 GDLDTA 504
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R+ W ++ +++ +E L F M E PD T+ + CG+ + G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 379 KWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
+ + L ++ V ++LI MY KCG + +A +F L + +V+W++M++G
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 438 NGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACT-----------HAGFLEKGWGYFNL 485
NG +A++ F +M M D+ P+RVT + ++ ACT H + +G+
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS---- 176
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ VN LN Y+ + KEA++ + M + D W T++ AC +
Sbjct: 177 -NDLSLVNSLLNCYA-------KSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQ 222
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/595 (34%), Positives = 332/595 (55%), Gaps = 4/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V + + L LF+ M K + + T+ + ++CA LS F +HGH +
Sbjct: 207 WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHAL 266
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F D + T +DMYAKCDR+ A+K+F+ +P+ S+NA+IVG+A+ K L
Sbjct: 267 KSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALE 326
Query: 142 LFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +++ + D +++ G LT ++ HL ++ +H + G+ ++ V NT + Y
Sbjct: 327 IFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ-LHGLAVKCGLGFNICVANTILDMY 385
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC L A +F +E R VSWN+II ++ +L+ + M+ PD T
Sbjct: 386 GKCGALVEACTIFDDMER--RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFT 443
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S++ +C +AL G +H + G LD V + L+ MY KCG + A + D +
Sbjct: 444 YGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE 503
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++T VSW ++ISG++ + + A R F M G +PD T +++ C +ELGK
Sbjct: 504 EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQ 563
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
L +V + + L+DMYSKCG++ D+R +F P++ V+W+ MI A +G
Sbjct: 564 IHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGH 623
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+A+ LF +M L+++PN F++VL+AC H G+++KG YF +M Y ++P + HYS
Sbjct: 624 GEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYS 683
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR ++ EAL ++SM ++D IW TLL CK+ N+E+ E L +L+P
Sbjct: 684 CMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQ 743
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ YV +AN+YA G W VA +R++MK ++KK PG S + + + TF V D
Sbjct: 744 DSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGD 798
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 259/537 (48%), Gaps = 12/537 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + K++ +F RM+ I + TF + KAC+ + D+ +H +
Sbjct: 106 WNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAI 165
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F +D+ + +VDMY+KC +LD A+++F +MP+R++ W+A+I G+ Q + L
Sbjct: 166 QMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLK 225
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M VG+ T + ++ L +H + D + + YA
Sbjct: 226 LFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYA 285
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC+ + A VF + R S+N+II G D+ +L ++ + D ++
Sbjct: 286 KCDRMSDAWKVFNTLPNPPRQ--SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISL 343
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
L++C + ++G +H + G ++ V NT++ MY KCG + A +FD M
Sbjct: 344 SGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMER 403
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ + Q ++ + L LF +M + PD T S++ C AL G
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G+ + V +AL+DMY KCG + +A ++ L EKT VSW ++I+G + +
Sbjct: 464 HGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQS 523
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY-- 499
A F QM+E+ + P+ T+ VL C + +E G + ++ ++N + Y
Sbjct: 524 ENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGK---QIHAQILKLNLHSDVYIA 580
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
S + D+ + G ++++ + P K D W ++CA H + E A +LFE
Sbjct: 581 STLVDMYSKCGNMQDSRLMFEKTP-KRDYVTWSAMICAYAYHGHGE----QAIKLFE 632
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 243/537 (45%), Gaps = 41/537 (7%)
Query: 55 LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK 114
TF I + C+ L + H ++ + F I+V +V Y K ++ A+K+FD+
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 115 MPDRDVASWNAMIVGFAQ---MGFLE----------------------------KVLCLF 143
MP RDV SWN MI G+A+ MGF + K + +F
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
MR + I D+ T + +A + L VH I +G + DV + + Y+KC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
L A +FR + E R +V W+++I G D+F + L ++ M+ G +T S
Sbjct: 187 KKLDGAFRIFREMPE--RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+ SC A G +H H + F D + + MY+KC + A +F+ + +
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-SGALELGKWFD 382
R S+ A+I GYA++ +AL +F +++ D +++ ++ C G LE G
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE-GIQLH 363
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A GL N+ V N ++DMY KCG++ +A +F + + VSW +IA N E V
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIV 423
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--S 500
+ L LF M+ + P+ T+ +V++AC L G + ++ + L+ + S
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG---MEIHGRIVKSGMGLDWFVGS 480
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
+ D+ G+ G L EA + K+ W +++ + E + ++ E+
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQMLEM 536
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 1 MAASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFI 60
M A + RL + T WNS I + ++ A F +M + + P+N T+ +
Sbjct: 493 MEAEKIHDRLEE----KTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATV 548
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
CA ++ + IH I+K SD+++ +T+VDMY+KC + + +F+K P RD
Sbjct: 549 LDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDY 608
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
+W+AMI +A G E+ + LF M+L+ ++ + + + +A H ++ K +H F
Sbjct: 609 VTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD--KGLHYF 666
Query: 181 GI---HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
I H G+D + + + + + + A + + V+ W +++ C
Sbjct: 667 QIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVI-WRTLLSNC 721
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 322/586 (54%), Gaps = 3/586 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ +R V KA+ + M ++ + P+N T+P + KAC+ L + +H
Sbjct: 98 IIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVH- 156
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ ++++VQ ++DM+AKC ++ A ++F++MPDRD+ASW A+I G G +
Sbjct: 157 ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLE 216
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF MR G+ D V V + A + + L ++ + G ++D+ V N I
Sbjct: 217 ALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVID 276
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC D A VF + VVSW+++I G + + +S Y MI G +
Sbjct: 277 MYCKCGDPLEAHRVFSHMV--YSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNA 334
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
S+L + E L QG+ +H+ + G DV V + LI MY+ CG I A +F+
Sbjct: 335 IVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFEC 394
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
D+ + W +MI GY GD + A F + A P+ +TV+S++ C Q GAL G
Sbjct: 395 TSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQG 454
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K Y GL NV V N+LIDMYSKCG + ++F + + V ++ TMI+ C +
Sbjct: 455 KEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSH 514
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+ + L + QM E RPN+VTF+++L AC+HAG L++GW +N M Y + P + H
Sbjct: 515 GQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEH 574
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
YSCM DL+GR G L A F+ MP+ DA ++G+LL AC++H +E+ E +A R+ +L+
Sbjct: 575 YSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLK 634
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
+ YV ++N+YA G RW+ ++ +R+M+K ++K PG S + +
Sbjct: 635 ADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQV 680
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 223/455 (49%), Gaps = 5/455 (1%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+ +V++Y L A+ F +P + + +WNA++ G +G K + +++M G+
Sbjct: 71 SQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVT 130
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T + +A L L + VH +H A+V V I +AKC ++ A +
Sbjct: 131 PDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRM 189
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + R + SW ++I G + + ++L +R M +G PD V S+L +C E
Sbjct: 190 FEEMPD--RDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLE 247
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
A+ G + + GF+ D+ V N +I MY KCGD A +F M VSW+ +I+
Sbjct: 248 AVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIA 307
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY+Q E+ +L+ M G + + S++ G+ L+ GK N+ GL
Sbjct: 308 GYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMS 367
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+V+V +ALI MY+ CGSI +A +F +K ++ W +MI G L G+F A F ++
Sbjct: 368 DVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIW 427
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ RPN +T +++L CT G L +G +TK + ++ + + D+ + G L
Sbjct: 428 GAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKS-GLGLNVSVGNSLIDMYSKCGFL 486
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ + M ++ + + T++ AC H E G
Sbjct: 487 ELGEKVFKQMMVR-NVTTYNTMISACGSHGQGEKG 520
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 5/368 (1%)
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
S + ++ Y L+ A L FR + + +++WN+I+ G F +++FY M+
Sbjct: 68 SFASQLVNVYVNFGSLQHAFLTFRALPH--KPIIAWNAILRGLVAVGHFTKAIHFYHSML 125
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G PD T +L +C AL GR VH +H +V V +I M++KCG ++
Sbjct: 126 QHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVE 184
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR +F+ M DR SWTA+I G G+ EAL LF M + G +PD V V S++ CG
Sbjct: 185 DARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACG 244
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ A++LG A G + ++ V NA+IDMY KCG +A +F + VVSW+T
Sbjct: 245 RLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWST 304
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+IAG + N + E+ L+ M+ + L N + +VL A L++G N + K
Sbjct: 305 LIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLK-E 363
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ ++ S + + G +KEA + K D +W +++ + + E +
Sbjct: 364 GLMSDVVVGSALIVMYANCGSIKEAESIFECTSDK-DIMVWNSMIVGYNLVGDFESAFFT 422
Query: 551 AYRLFELE 558
R++ E
Sbjct: 423 FRRIWGAE 430
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 6/205 (2%)
Query: 271 PEALVQGRLVHSHGIHYGF-----DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
P L + R +H+ + GF S + L+++Y G + A F + + +
Sbjct: 40 PPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPII 99
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
+W A++ G G +A+ + +M G PD T ++ C AL+LG+W
Sbjct: 100 AWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-T 158
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
G K NV V A+IDM++KCGS+ DAR +F +P++ + SWT +I G NGE +EAL
Sbjct: 159 MHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEAL 218
Query: 446 DLFHQMMELDLRPNRVTFLAVLQAC 470
LF +M L P+ V ++L AC
Sbjct: 219 LLFRKMRSEGLMPDSVIVASILPAC 243
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 321/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + +A K L LF RM ++I + T + K CA + Q++H +
Sbjct: 298 WNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAI 357
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D F+ +VDMY+KC A K+F ++ D DV SW+A+I Q G +
Sbjct: 358 RIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAE 417
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR G+ + T+ L AA L +S+H+ G + D +VCN ++ Y
Sbjct: 418 VFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYM 477
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K ++ VF R ++SWN+++ G + D L + M+ +GF P++ T
Sbjct: 478 KIGSVQDGCRVFEATTN--RDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTF 535
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S+L SC + G+ VH+ + D + V L+ MY+K ++ A +F+ +
Sbjct: 536 ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK 595
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R +WT +++GYAQ G ++A++ F M+ G P+ T+ S +SGC + L+ G+
Sbjct: 596 RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL 655
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ A G ++ V +AL+DMY+KCG + DA +F L + VSW T+I G + +G+
Sbjct: 656 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQG 715
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL F M++ P+ VTF+ VL AC+H G +E+G +FN ++K+Y + P + HY+C
Sbjct: 716 GKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYAC 775
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR GK E F++ M + S+ IW T+L ACK+H NIE GE A +LFELEP
Sbjct: 776 MVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEI 835
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y+ ++N++A G WD V N+R +M VKK PG S V +NG+ F D
Sbjct: 836 DSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHD 889
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 236/478 (49%), Gaps = 18/478 (3%)
Query: 3 ASSLPPRLNKIYRS-----STINQWNS----QIREAVDKNEAHKALLLFRRMKKNDIEPN 53
A +LP RL ++ S+ N+ NS +I E V+K + L D +
Sbjct: 75 AQNLPVRLQDGFQKTPSKLSSPNRPNSTPGNKIPETVEKKRIWRGLDF-------DSKGR 127
Query: 54 NLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD 113
+ + + CA D + IHG ++KS D + ++V++YAKC + A K+F
Sbjct: 128 LRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 187
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
++P+RDV SW A+I GF G+ + LF MR G++A+ T +A L
Sbjct: 188 EIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEF 247
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
K VH+ I +G +D+ V + + YAKC ++ +AE VF + + + VSWN+++ G
Sbjct: 248 GKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPK--QNAVSWNALLNGF 305
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+ LN + M T+ ++L C L G++VHS I G +LD
Sbjct: 306 AQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDE 365
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ L+ MYSKCG A +F + D VSW+A+I+ QKG EA +F M +
Sbjct: 366 FISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHS 425
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G +P+ T+ S++S G L G+ C G + + VCNAL+ MY K GS+ D
Sbjct: 426 GVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDG 485
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+F A + ++SW +++G N L +F+QM+ PN TF+++L++C+
Sbjct: 486 CRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCS 543
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/598 (35%), Positives = 326/598 (54%), Gaps = 9/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA----KACAKLSDFLYSQMIH 77
W + I V+ +AL LF +M +EP PFI KAC + + +H
Sbjct: 35 WTTIISGYVNGMNTTEALSLFSKMW---VEPGLHMDPFILSLALKACGLNMSVSFGESLH 91
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ VK+ F + +FV + +VDMY K ++D +F +MP R+V SW A+I G + G+ +
Sbjct: 92 GYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNK 151
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F +M + + D T +A + L+ + +H + G A V NT
Sbjct: 152 EALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLA 211
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y KC L +F + + R VVSW +II + ++++ +R M P+
Sbjct: 212 TMYNKCGKLDYGLRLFESMTQ--RDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPN 269
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T +++S C + G +H+H I G +SV N++++MYSKC +D A +F
Sbjct: 270 EFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQ 329
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
G+ R +SW+ MISGYAQ G +EA M G P+ S++S CG LE
Sbjct: 330 GLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQ 389
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + GL+ N MV +ALI+MYSKCGSI +A ++F +VSWT MI G A
Sbjct: 390 GKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAE 449
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EA+DLF ++ ++ LRP+ VTF+AVL AC+HAG ++ G+ YFN ++KV+Q+ P +
Sbjct: 450 HGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKD 509
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY CM DLL R G+L +A +QSMP + D +W TLL AC+IH +++ G+ A ++ +L
Sbjct: 510 HYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQL 569
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+P+ A ++ +AN+YA G+W A +R MMK V K PG S + + F D
Sbjct: 570 DPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGD 627
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 196/419 (46%), Gaps = 10/419 (2%)
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL-VGIQAD-FVTV 158
K L+ A +LFDKM RD SW +I G+ + L LF M + G+ D F+
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ L ++ +S +S+H + + V V + + Y K + +VF+ E
Sbjct: 73 LALKACGLNMS-VSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFK--EM 129
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
LR VVSW +II G ++L ++ M D T S L +C AL GR
Sbjct: 130 PLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGR 189
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H + GF V NTL +MY+KCG +D LF+ M R VSWT +I Q G
Sbjct: 190 EIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIG 249
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ A++ F M P+ T ++ISGC G +E G+ + GL D++ V N
Sbjct: 250 QEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVAN 309
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+++ MYSKC + A +F L + ++SW+TMI+G A G EA D M RP
Sbjct: 310 SIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRP 369
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH--YSCMADLLGRKGKLKEA 515
N F +VL C + LE+G L V V E N S + ++ + G +KEA
Sbjct: 370 NEFAFASVLSVCGNMAILEQG---KQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEA 425
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 22/344 (6%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + + W + I V + A+ FRRM++ D+ PN TF + CA L
Sbjct: 225 RLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLG 284
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + +H H+++ + V +++ MY+KC +LD A +F + RD+ SW+ MI
Sbjct: 285 RIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMIS 344
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+AQ G E+ MR G + + + + L K +H+ + +G++
Sbjct: 345 GYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQ 404
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + I+ Y+KC +K A +F E +VSW ++I G ++++ ++
Sbjct: 405 NTMVQSALINMYSKCGSIKEASKIFD--EAEYNNIVSWTAMINGYAEHGYSQEAIDLFKK 462
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGI-----HYGFDLDVSVINT 298
+ G RPD T +++L++C + G L H I HYG
Sbjct: 463 LPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYG---------C 513
Query: 299 LISMYSKCGDIDSARFLFDGMC-DRTRVSWTAMISGYAQKGDLD 341
+I + + G ++ A + M R V W+ ++ GD+D
Sbjct: 514 MIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVD 557
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 10/255 (3%)
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
IN ++ K G +++AR LFD M R +SWT +ISGY + EAL LF M
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63
Query: 356 VPDLVTVLSM-ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+ +LS+ + CG + ++ G+ Y+ ++V V +AL+DMY K G + +
Sbjct: 64 LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F +P + VVSWT +IAG G EAL F M + + TF + L+AC +G
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 475 FLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
L G + + K + + + +A + + GKL L +SM + D W T
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVAN--TLATMYNKCGKLDYGLRLFESMT-QRDVVSWTT 240
Query: 534 LLCACKIHRNIEIGE 548
+ I N++IG+
Sbjct: 241 I-----IMSNVQIGQ 250
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/546 (36%), Positives = 311/546 (56%), Gaps = 5/546 (0%)
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
FL++ +++G+ F + + M ++ + R++ A KLFD++ DRDV SWN+MI G
Sbjct: 168 FLWNLLMNGYAKIGNFRESLSLFKRMRELGIR--RVESARKLFDELGDRDVISWNSMISG 225
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G EK L LF M L+GI D T++ + + L L +++H + I +
Sbjct: 226 YVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKE 285
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+++ N + Y+K +L A VF + G R+VVSW S+I G D S+ + M
Sbjct: 286 LTLNNCLLDMYSKSGNLNSAIQVFETM--GERSVVSWTSMIAGYAREGLSDMSVRLFHEM 343
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G PD+ T+ ++L +C C L G+ VH++ D+ V N L+ MY+KCG +
Sbjct: 344 EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSM 403
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A +F M + VSW MI GY++ +EAL LF M+ + P+ +T+ ++ C
Sbjct: 404 GDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK-PNSITMACILPAC 462
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
ALE G+ + G + V NAL+DMY KCG++G AR LF +PEK +VSWT
Sbjct: 463 ASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWT 522
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MIAG ++G EA+ F++M + P+ V+F+++L AC+H+G L++GWG+FN+M
Sbjct: 523 VMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNN 582
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ P+ HY+C+ DLL R G L +A F++ MPI+ DA IWG LLC C+I+ ++++ E
Sbjct: 583 CCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEK 642
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA +FELEP + YV +ANIYA +W+ V LR + R ++K PG S + I GK
Sbjct: 643 VAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVH 702
Query: 610 TFTVED 615
F D
Sbjct: 703 IFVTGD 708
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 237/497 (47%), Gaps = 30/497 (6%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V + K L LF +M I + T + C+ L + +HG+
Sbjct: 218 SWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYA 277
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K+ F ++ + ++DMY+K L+ A ++F+ M +R V SW +MI G+A+ G + +
Sbjct: 278 IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 337
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF+ M GI D T+ + A L K VH++ + +D+ V N + Y
Sbjct: 338 RLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMY 397
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC + A VF ++ ++ +VSWN++IGG + +++LN + M Y+ +P+ T
Sbjct: 398 AKCGSMGDAHSVFSEMQ--VKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSIT 454
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +L +C AL +G+ +H H + GF LD V N L+ MY KCG + AR LFD +
Sbjct: 455 MACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 514
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ VSWT MI+GY G EA+ F M +G PD V+ +S++ C SG L+ G
Sbjct: 515 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 574
Query: 381 FDNYA---CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCA 436
F N C K C ++D+ ++ G++ A + +P E W ++ GC
Sbjct: 575 FFNMMRNNCCIEPKSEHYAC--IVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCR 632
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ + A + + EL+ + GY+ L+ +Y +
Sbjct: 633 IYHDVKLAEKVAEHVFELE---------------------PENTGYYVLLANIYAEAEKW 671
Query: 497 NHYSCMADLLGRKGKLK 513
+ + +GR+G K
Sbjct: 672 EEVKKLRERIGRRGLRK 688
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W S I + + ++ LF M+K I P+ T I ACA + +H
Sbjct: 316 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVH 375
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I ++ SD+FV ++DMYAKC + A+ +F +M +D+ SWN MI G+++
Sbjct: 376 NYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPN 435
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF M+ + + +T+ + A L + +H + G D V N +
Sbjct: 436 EALNLFVEMQ-YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALV 494
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC L +A L+F I E + +VSW +I G +++ + M G PD
Sbjct: 495 DMYLKCGALGLARLLFDMIPE--KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPD 552
Query: 258 VTTVVSLLSSC 268
+ +S+L +C
Sbjct: 553 EVSFISILYAC 563
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 324/590 (54%), Gaps = 3/590 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
++++R + +++ AL F M P TF + K CA D + +H +
Sbjct: 28 HARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAA 87
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
S+ T + +MYAKC R A ++FD+MP RD +WNA++ G+A+ G + +
Sbjct: 88 RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147
Query: 143 FYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
M+ G + D +T++ + A +A+ L+ + H+F I G++ V+V + AY
Sbjct: 148 VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYC 207
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++ A +VF + + VSWN++I G ++L + M+ +G +V
Sbjct: 208 KCGDIRAARVVFDWMPT--KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSV 265
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++ L +C L +G VH + G D +VSV+N LI+MYSKC +D A +FD +
Sbjct: 266 LAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDR 325
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
RT+VSW AMI G AQ G ++A+RLF M+ PD T++S+I +W
Sbjct: 326 RTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWI 385
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y+ L +V V ALIDMY+KCG + AR LF + E+ V++W MI G +G
Sbjct: 386 HGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A++LF +M + + PN TFL+VL AC+HAG +++G YF M + Y + P + HY
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT 505
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR GKL EA F+Q MP+ ++G +L ACK+H+N+E+ E A ++FEL P
Sbjct: 506 MVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQE 565
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+V +ANIYA W VA +RT M++N ++K PG S++ + + TF
Sbjct: 566 GVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTF 615
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 3/292 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I ++ +AL LF RM + ++ +++ +AC +L +H +V
Sbjct: 230 WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLV 289
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ S++ V ++ MY+KC R+D A +FD++ R SWNAMI+G AQ G E +
Sbjct: 290 RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVR 349
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+L ++ D T++ + A + +H + I + +D DV V I YA
Sbjct: 350 LFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYA 409
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A ++F E R V++WN++I G ++ + M G P+ TT
Sbjct: 410 KCGRVNIARILFNSARE--RHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 262 VSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+S+LS+C + +GR S YG + + T++ + + G +D A
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/594 (34%), Positives = 327/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V + + L LF M++ + + ++ ++CA +S + +H H +
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F SD V T +VD+YAK + L A + F +P+ V + NAM+VG + G + +
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M I+ D V++ G+ A K + VH I G D D+ V N + Y
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A L+F+G+++ + VSWN+II +DD++ + M+ G +PD T
Sbjct: 398 KCKALMEAYLIFQGMKQ--KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 455
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +L G +VH I G D V +T++ MY KCG ID A+ L D +
Sbjct: 456 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 515
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A++SG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 516 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 575
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ D+ + + L+DMY+KCG + D+ +F + ++ VSW MI G AL+G
Sbjct: 576 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 635
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
VEAL +F +M + ++ PN TF+AVL+AC+H G + G YF+LMT Y++ P+L H++C
Sbjct: 636 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC 695
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR +EA+ F+ SMP ++DA IW TLL CKI +++EI E A + L+P
Sbjct: 696 MVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDD 755
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y+ ++N+YA G+W V+ R ++K+ ++KK PG S + + + F V D
Sbjct: 756 SSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGD 809
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 251/536 (46%), Gaps = 10/536 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + +++ LF M + + P+ TF + K+C+ L + +H V
Sbjct: 117 WNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 176
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D+ + +VDMY KC LD A F MP+R+ SW A I G Q + L
Sbjct: 177 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 236
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ +G+ + ++ L+ + +H+ I +D V + YA
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K N L A F G+ TV + N+++ G +++ ++ MI R DV ++
Sbjct: 297 KANSLTDARRAFFGLPN--HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ S+C + QG+ VH I GFD+D+ V N ++ +Y KC + A +F GM
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A+I+ Q G D+ + F M G PD T S++ C +LE G
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ GL + V + ++DMY KCG I +A++L + + VVSW +++G +LN E
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 534
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA F +M+++ L+P+ TF VL C + +E G + K ++ E S
Sbjct: 535 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS-ST 593
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIEIGEYVAYRLFE 556
+ D+ + G + ++L + + K D W ++C +H +E A R+FE
Sbjct: 594 LVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHGLGVE-----ALRMFE 643
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 187/392 (47%), Gaps = 2/392 (0%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D TM+ Y+ + A LFD MPD DV SWNA++ G+ Q G ++ + LF M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ D T L ++ + LSL VH+ + G++ DV + + Y KC L
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F G+ E R VSW + I GC +++ L + M G + S S
Sbjct: 202 DALCFFYGMPE--RNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C L GR +H+H I F D V ++ +Y+K + AR F G+ + T +
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
AM+ G + G EA+ LF M + D+V++ + S C ++ G+ A
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G ++ V NA++D+Y KC ++ +A +F + +K VSW +IA NG + + +
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
F++M+ ++P+ T+ +VL+AC LE G
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYG 471
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 203/422 (48%), Gaps = 4/422 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ N+ + V +A+ LF+ M ++ I + ++ + ACA+ + Q +H
Sbjct: 315 TVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 374
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+KS F DI V ++D+Y KC L AY +F M +D SWNA+I Q G +
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ F M G++ D T + +A + L VH I G+ +D V +T +
Sbjct: 435 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 494
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + A+ + I G + VVSWN+I+ G + + +++ F+ M+ G +PD
Sbjct: 495 DMYCKCGIIDEAQKLHDRI--GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L +C + G+ +H I D + +TL+ MY+KCGD+ + +F+
Sbjct: 553 HFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFE 612
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R VSW AMI GYA G EALR+F M+ VP+ T ++++ C G +
Sbjct: 613 KVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDD 672
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G ++F L+ + ++D+ + +A + ++P + V W T+++ C
Sbjct: 673 GCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSIC 732
Query: 436 AL 437
+
Sbjct: 733 KI 734
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
NT ++AY+ D+ A +F G+ + VVSWN+++ G F +S++ + M G
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPD--PDVVSWNALVSGYCQRGMFQESVDLFVEMARRG 144
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD TT LL SC E L G VH+ + G ++DV + L+ MY KC +D A
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F GM +R VSW A I+G Q L LF M+ G + S C
Sbjct: 205 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L G+ +A + +V A++D+Y+K S+ DAR F+ LP TV + M+
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 324
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQV 492
G G +EA+ LF M+ +R + V+ V AC +G L K + V
Sbjct: 325 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 384
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ +N+ + DL G+ L EA Q M K D+ W ++ A
Sbjct: 385 DICVNN--AVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAA 426
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 102/223 (45%), Gaps = 31/223 (13%)
Query: 288 GFDLDVSVINTLISM-------------------------------YSKCGDIDSARFLF 316
GF V N L+ M YS GDI +A LF
Sbjct: 47 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
DGM D VSW A++SGY Q+G E++ LF M G PD T ++ C L
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG A GL+ +V +AL+DMY KC S+ DA FY +PE+ VSW IAGC
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
N ++V L+LF +M L L ++ ++ + ++C L G
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 269
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 35/215 (16%)
Query: 357 PDLVTVLSMISGCGQSG--ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P VT + C Q+G AL G+ G V N L+ MY++C AR
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 415 ELFYALPEKTVVSWTTM-------------------------------IAGCALNGEFVE 443
+F A+P + VSW TM ++G G F E
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
++DLF +M + P+R TF +L++C+ L G L K + ++ S +
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALV 191
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
D+ G+ L +AL F MP ++ WG + C
Sbjct: 192 DMYGKCRSLDDALCFFYGMPERNWVS-WGAAIAGC 225
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 321/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I AL +F M+ + + P+ +T + ACA L D +H ++
Sbjct: 212 FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF 271
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ SD ++ +++D+Y KC ++ A +F+ +V WN M+V F Q+ L K
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ GI+ + T + + + + L + +HS + G ++D+ V I Y+
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L+ A V ++E + VVSW S+I G + D+L ++ M G PD +
Sbjct: 392 KYGWLEKARRVLEMLKE--KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +S C A+ QG +H+ G+ DVS+ N L+++Y++CG I A F+ M
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMEL 509
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ ++ ++SG+AQ G +EAL++F M+ +G ++ T +S +S ++ GK
Sbjct: 510 KDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G V NALI +Y KCGS DA+ F + E+ VSW T+I C+ +G
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+EALDLF QM + ++PN VTF+ VL AC+H G +E+G YF M+ Y + P +HY+C
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ D+ GR G+L A F++ MPI +DA +W TLL ACK+H+NIE+GE+ A L ELEPH
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++N YA+ +W +R MM+ V+K PG+S + + F V D
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGD 803
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/513 (27%), Positives = 245/513 (47%), Gaps = 7/513 (1%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+AL L+R+M + + P + +C K F ++IH K F S+IFV
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++ +Y +C A ++F MP RD ++N +I G AQ G E L +F M+ G+ D
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
VT+ L A L +HS+ G+ +D + + + Y KC D++ A ++F
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ VV WN ++ + S + M G RP+ T +L +C C +
Sbjct: 304 SSDR--TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G +HS + GF+ D+ V LI MYSK G ++ AR + + + ++ VSWT+MI+GY
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q +AL F M+ G PD + + S ISGC A+ G G +V
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDV 481
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+ NAL+++Y++CG I +A F + K ++ +++G A +G EAL +F +M +
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQS 541
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLK 513
++ N TF++ L A + +++G + K + E+ + + L G+ G +
Sbjct: 542 GVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--ALISLYGKCGSFE 599
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIH-RNIE 545
+A M +++ W T++ +C H R +E
Sbjct: 600 DAKMEFSEMSERNEVS-WNTIITSCSQHGRGLE 631
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 231/465 (49%), Gaps = 11/465 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH V V ++D+Y+K + A ++F+++ RD SW AM+ G+AQ G
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ L L+ M G+ + + + A+ + + +H+ G G +++ V N
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y +C ++AE VF + R V++N++I G + +L + M + G
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPH--RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD T+ SLL++C L +G +HS+ G D + +L+ +Y KCGD+++A +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 316 FDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F+ DRT V W M+ + Q DL ++ LF M+AAG P+ T ++ C +
Sbjct: 302 FNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
++LG+ + + G + ++ V LIDMYSK G + AR + L EK VVSWT+MIAG
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY--QV 492
+ +AL F +M + + P+ + + + C + +G + ++Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHARIYVSGY 477
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ +++ ++ + +L R G+++EA + M +K GI G L +
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEMELKD--GITGNGLVS 520
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 170/358 (47%), Gaps = 3/358 (0%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSL 173
M R AS + GF KVL LF + R G L + + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ +H+ + G+ V N I Y+K + A VF E R VSW +++ G
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE--ELSARDNVSWVAMLSGY 118
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+++L YR M G P + S+LSSC E QGRL+H+ G +GF ++
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V N +I++Y +CG A +F M R V++ +ISG+AQ G + AL +F M+ +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD VT+ S+++ C G L+ G +Y G+ + ++ +L+D+Y KCG + A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+F + VV W M+ + ++ +LF QM +RPN+ T+ +L+ CT
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCT 356
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 3/312 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ ++ + + W S I V AL F+ M+K I P+N+ CA ++
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
IH I S + D+ + +V++YA+C R+ A+ F++M +D + N ++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVS 520
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GFAQ G E+ L +F M G++ + T + A+ + + K +H+ I G
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V N IS Y KC + A++ F + E R VSWN+II C+ + ++L+ +
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIITSCSQHGRGLEALDLFDQ 638
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M +G +P+ T + +L++C + +G S YG +I ++ + G
Sbjct: 639 MKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAG 698
Query: 308 DIDSARFLFDGM 319
+D A+ + M
Sbjct: 699 QLDRAKKFIEEM 710
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/599 (34%), Positives = 331/599 (55%), Gaps = 4/599 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ + + +AL LF ++ N + P+ T+P + KAC L +Y + IH
Sbjct: 70 VSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIH 129
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
H++K+ D+FV +++++MYAKCD+ A KLFD+ P RDV WNA+I + + G E
Sbjct: 130 NHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAE 189
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L F M+ +G + + VT + + +L K VH I + D V + +
Sbjct: 190 MALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALV 249
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC L+MA+ VF I + ++WN++I G + + M +G +P
Sbjct: 250 DMYGKCGCLEMAKEVFEKIPR--KNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPT 307
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ T+ S++ + L G+ +H + + D+D+ + +LI Y KCG + SA +F
Sbjct: 308 LMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFR 367
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ VSW MISG+ G+ +AL ++ M+ PD +T S +S C Q AL+
Sbjct: 368 TISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDK 427
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ + L+ N +V AL+DMY+KCG + +AR+LF+ LP++ +VSWT+MI
Sbjct: 428 GRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGS 487
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G+ EAL LF +M +L++R + VTFLAVL AC+HAG +++G+ YFN M Y + P +
Sbjct: 488 HGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIE 547
Query: 498 HYSCMADLLGRKGKLKEALDFVQ-SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HYSC+ DLLGR G+L EA + +Q S +SD G+ TL AC +H N +G + L E
Sbjct: 548 HYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIE 607
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++P + Y+ ++N+YA +WD V +R MK +KK PG S + IN + F ED
Sbjct: 608 VDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAED 666
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 229/484 (47%), Gaps = 10/484 (2%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDV 120
+ C ++IH I F S+I + +++ Y C A +F DV
Sbjct: 11 RTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLDV 70
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
+ WNA++ + + L LF + ++ DF T + +A + + +H+
Sbjct: 71 SLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHN 130
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD-K 238
+ G+ DV V ++ ++ YAKC+ A +F + R V WN++I C + D K
Sbjct: 131 HLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQ--RDVGCWNAVI-SCYFKDGK 187
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+ +L + M GF P+ T ++SSC L +G+ VH I LD V++
Sbjct: 188 AEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSA 247
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+ MY KCG ++ A+ +F+ + + ++W AMI+GY+ KGD + L M G P
Sbjct: 248 LVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPT 307
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
L+T+ S+I +S L GK+ Y + ++ + +LID Y KCG + A +F
Sbjct: 308 LMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFR 367
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ + VVSW MI+G + G ++AL ++ M E ++P+ +TF + L AC+ L+K
Sbjct: 368 TISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDK 427
Query: 479 GWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
G ++ ++ + N + + D+ + G + EA +P K D W +++ A
Sbjct: 428 GRELHYCIINHKLEANEIV--MGALLDMYAKCGDVDEARKLFHQLP-KRDLVSWTSMIFA 484
Query: 538 CKIH 541
H
Sbjct: 485 YGSH 488
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 163/327 (49%), Gaps = 2/327 (0%)
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D+VT++ + +K L K +H G +++ + + I Y C+D AELVF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPE 272
+ + L V WN+++ T +F ++L + + + + RPD T +L +C
Sbjct: 62 QTNDCPL-DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
++ GR +H+H + G DV V ++L++MY+KC A LFD R W A+IS
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y + G + AL+ F M+ G P+ VT ++S C + LE GK +
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+ V +AL+DMY KCG + A+E+F +P K ++W MI G +L G+ ++L +M
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ +P +T +++ A + + L G
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHG 327
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 8/283 (2%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T++S L +C + L QG+L+H GF ++ + +LI Y C D SA +F
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 317 D-GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGA 374
C W A++S Y EAL+LF + V PD T ++ CG G
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ G+ N+ GL +V V ++L++MY+KC DA +LF P++ V W +I+
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
+G+ AL F +M EL PN VTF V+ +CT LE+G + ++ +
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGK---EVHRELIERRI 238
Query: 495 ELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L+ + S + D+ G+ G L+ A + + +P + +A W ++
Sbjct: 239 LLDAFVLSALVDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMI 280
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/594 (34%), Positives = 327/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V + + L LF M++ + + ++ ++CA +S + +H H +
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F SD V T +VD+YAK + L A + F +P+ V + NAM+VG + G + +
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M I+ D V++ G+ A K + VH I G D D+ V N + Y
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A L+F+G+++ + VSWN+II +DD++ + M+ G +PD T
Sbjct: 398 KCKALMEAYLIFQGMKQ--KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 455
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +L G +VH I G D V +T++ MY KCG ID A+ L D +
Sbjct: 456 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 515
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A++SG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 516 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 575
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ D+ + + L+DMY+KCG + D+ +F + ++ VSW MI G AL+G
Sbjct: 576 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 635
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
VEAL +F +M + ++ PN TF+AVL+AC+H G + G YF+LMT Y++ P+L H++C
Sbjct: 636 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC 695
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR +EA+ F+ SMP ++DA IW TLL CKI +++EI E A + L+P
Sbjct: 696 MVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDD 755
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y+ ++N+YA G+W V+ R ++K+ ++KK PG S + + + F V D
Sbjct: 756 SSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGD 809
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 251/536 (46%), Gaps = 10/536 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + +++ LF M + + P+ TF + K+C+ L + +H V
Sbjct: 117 WNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 176
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D+ + +VDMY KC LD A F MP+R+ SW A I G Q + L
Sbjct: 177 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 236
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ +G+ + ++ L+ + +H+ I +D V + YA
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K N L A F G+ TV + N+++ G +++ ++ MI R DV ++
Sbjct: 297 KANSLTDARRAFFGLPN--HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ S+C + QG+ VH I GFD+D+ V N ++ +Y KC + A +F GM
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A+I+ Q G D+ + F M G PD T S++ C +LE G
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ GL + V + ++DMY KCG I +A++L + + VVSW +++G +LN E
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 534
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA F +M+++ L+P+ TF VL C + +E G + K ++ E S
Sbjct: 535 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS-ST 593
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIEIGEYVAYRLFE 556
+ D+ + G + ++L + + K D W ++C +H +E A R+FE
Sbjct: 594 LVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHGLGVE-----ALRMFE 643
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 187/392 (47%), Gaps = 2/392 (0%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D TM+ Y+ + A LFD MPD DV SWNA++ G+ Q G ++ + LF M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ D T L ++ + LSL VH+ + G++ DV + + Y KC L
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F G+ E R VSW + I GC +++ L + M G + S S
Sbjct: 202 DALCFFYGMPE--RNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C L GR +H+H I F D V ++ +Y+K + AR F G+ + T +
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
AM+ G + G EA+ LF M + D+V++ + S C ++ G+ A
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G ++ V NA++D+Y KC ++ +A +F + +K VSW +IA NG + + +
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
F++M+ ++P+ T+ +VL+AC LE G
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYG 471
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 203/422 (48%), Gaps = 4/422 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ N+ + V +A+ LF+ M ++ I + ++ + ACA+ + Q +H
Sbjct: 315 TVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 374
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+KS F DI V ++D+Y KC L AY +F M +D SWNA+I Q G +
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ F M G++ D T + +A + L VH I G+ +D V +T +
Sbjct: 435 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 494
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + A+ + I G + VVSWN+I+ G + + +++ F+ M+ G +PD
Sbjct: 495 DMYCKCGIIDEAQKLHDRI--GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L +C + G+ +H I D + +TL+ MY+KCGD+ + +F+
Sbjct: 553 HFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFE 612
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R VSW AMI GYA G EALR+F M+ VP+ T ++++ C G +
Sbjct: 613 KVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDD 672
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G ++F L+ + ++D+ + +A + ++P + V W T+++ C
Sbjct: 673 GCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSIC 732
Query: 436 AL 437
+
Sbjct: 733 KI 734
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
NT ++AY+ D+ A +F G+ + VVSWN+++ G F +S++ + M G
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPD--PDVVSWNALVSGYCQRGMFQESVDLFVEMARRG 144
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD TT LL SC E L G VH+ + G ++DV + L+ MY KC +D A
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F GM +R VSW A I+G Q L LF M+ G + S C
Sbjct: 205 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L G+ +A + +V A++D+Y+K S+ DAR F+ LP TV + M+
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 324
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQV 492
G G +EA+ LF M+ +R + V+ V AC +G L K + V
Sbjct: 325 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 384
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ +N+ + DL G+ L EA Q M K D+ W ++ A
Sbjct: 385 DICVNN--AVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAA 426
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 103/223 (46%), Gaps = 31/223 (13%)
Query: 288 GFDLDVSVINTLISM-------------------------------YSKCGDIDSARFLF 316
GF + V N L+ M YS GDI +A LF
Sbjct: 47 GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
DGM D VSW A++SGY Q+G E++ LF M G PD T ++ C L
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG A GL+ +V +AL+DMY KC S+ DA FY +PE+ VSW IAGC
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
N ++V L+LF +M L L ++ ++ + ++C L G
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 269
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 35/215 (16%)
Query: 357 PDLVTVLSMISGCGQSG--ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P VT + C Q+G AL G+ G N V N L+ MY++C AR
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACAR 72
Query: 415 ELFYALPEKTVVSWTTM-------------------------------IAGCALNGEFVE 443
+F A+P + VSW TM ++G G F E
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
++DLF +M + P+R TF +L++C+ L G L K + ++ S +
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALV 191
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
D+ G+ L +AL F MP ++ WG + C
Sbjct: 192 DMYGKCRSLDDALCFFYGMPERNWVS-WGAAIAGC 225
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/594 (34%), Positives = 327/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V + + L LF M++ + + ++ ++CA +S + +H H +
Sbjct: 260 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 319
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F SD V T +VD+YAK + L A + F +P+ V + NAM+VG + G + +
Sbjct: 320 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 379
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M I+ D V++ G+ A K + VH I G D D+ V N + Y
Sbjct: 380 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 439
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A L+F+G+++ + VSWN+II +DD++ + M+ G +PD T
Sbjct: 440 KCKALMEAYLIFQGMKQ--KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 497
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +L G +VH I G D V +T++ MY KCG ID A+ L D +
Sbjct: 498 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 557
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A++SG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 558 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 617
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ D+ + + L+DMY+KCG + D+ +F + ++ VSW MI G AL+G
Sbjct: 618 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 677
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
VEAL +F +M + ++ PN TF+AVL+AC+H G + G YF+LMT Y++ P+L H++C
Sbjct: 678 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC 737
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR +EA+ F+ SMP ++DA IW TLL CKI +++EI E A + L+P
Sbjct: 738 MVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDD 797
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y+ ++N+YA G+W V+ R ++K+ ++KK PG S + + + F V D
Sbjct: 798 SSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGD 851
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 251/536 (46%), Gaps = 10/536 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + +++ LF M + + P+ TF + K+C+ L + +H V
Sbjct: 159 WNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 218
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D+ + +VDMY KC LD A F MP+R+ SW A I G Q + L
Sbjct: 219 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 278
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ +G+ + ++ L+ + +H+ I +D V + YA
Sbjct: 279 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 338
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K N L A F G+ TV + N+++ G +++ ++ MI R DV ++
Sbjct: 339 KANSLTDARRAFFGLPN--HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 396
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ S+C + QG+ VH I GFD+D+ V N ++ +Y KC + A +F GM
Sbjct: 397 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 456
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A+I+ Q G D+ + F M G PD T S++ C +LE G
Sbjct: 457 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 516
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ GL + V + ++DMY KCG I +A++L + + VVSW +++G +LN E
Sbjct: 517 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 576
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA F +M+++ L+P+ TF VL C + +E G + K ++ E S
Sbjct: 577 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS-ST 635
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIEIGEYVAYRLFE 556
+ D+ + G + ++L + + K D W ++C +H +E A R+FE
Sbjct: 636 LVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHGLGVE-----ALRMFE 685
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 187/392 (47%), Gaps = 2/392 (0%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D TM+ Y+ + A LFD MPD DV SWNA++ G+ Q G ++ + LF M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ D T L ++ + LSL VH+ + G++ DV + + Y KC L
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F G+ E R VSW + I GC +++ L + M G + S S
Sbjct: 244 DALCFFYGMPE--RNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 301
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C L GR +H+H I F D V ++ +Y+K + AR F G+ + T +
Sbjct: 302 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 361
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
AM+ G + G EA+ LF M + D+V++ + S C ++ G+ A
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G ++ V NA++D+Y KC ++ +A +F + +K VSW +IA NG + + +
Sbjct: 422 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 481
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
F++M+ ++P+ T+ +VL+AC LE G
Sbjct: 482 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYG 513
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 203/423 (47%), Gaps = 4/423 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ N+ + V +A+ LF+ M ++ I + ++ + ACA+ + Q +H
Sbjct: 357 TVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 416
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+KS F DI V ++D+Y KC L AY +F M +D SWNA+I Q G +
Sbjct: 417 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 476
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ F M G++ D T + +A + L VH I G+ +D V +T +
Sbjct: 477 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 536
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + A+ + I G + VVSWN+I+ G + + +++ F+ M+ G +PD
Sbjct: 537 DMYCKCGIIDEAQKLHDRI--GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 594
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L +C + G+ +H I D + +TL+ MY+KCGD+ + +F+
Sbjct: 595 HFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFE 654
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R VSW AMI GYA G EALR+F M+ VP+ T ++++ C G +
Sbjct: 655 KVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDD 714
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G ++F L+ + ++D+ + +A + ++P + V W T+++ C
Sbjct: 715 GCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSIC 774
Query: 436 ALN 438
+
Sbjct: 775 KIR 777
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
NT ++AY+ D+ A +F G+ + VVSWN+++ G F +S++ + M G
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDP--DVVSWNALVSGYCQRGMFQESVDLFVEMARRG 186
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD TT LL SC E L G VH+ + G ++DV + L+ MY KC +D A
Sbjct: 187 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 246
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F GM +R VSW A I+G Q L LF M+ G + S C
Sbjct: 247 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 306
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L G+ +A + +V A++D+Y+K S+ DAR F+ LP TV + M+
Sbjct: 307 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 366
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQV 492
G G +EA+ LF M+ +R + V+ V AC +G L K + V
Sbjct: 367 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 426
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ +N+ + DL G+ L EA Q M K D+ W ++ A
Sbjct: 427 DICVNN--AVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAA 468
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 102/223 (45%), Gaps = 31/223 (13%)
Query: 288 GFDLDVSVINTLISM-------------------------------YSKCGDIDSARFLF 316
GF V N L+ M YS GDI +A LF
Sbjct: 89 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 148
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
DGM D VSW A++SGY Q+G E++ LF M G PD T ++ C L
Sbjct: 149 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 208
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG A GL+ +V +AL+DMY KC S+ DA FY +PE+ VSW IAGC
Sbjct: 209 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 268
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
N ++V L+LF +M L L ++ ++ + ++C L G
Sbjct: 269 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 311
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 35/215 (16%)
Query: 357 PDLVTVLSMISGCGQSG--ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P VT + C Q+G AL G+ G V N L+ MY++C AR
Sbjct: 55 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 114
Query: 415 ELFYALPEKTVVSWTTM-------------------------------IAGCALNGEFVE 443
+F A+P + VSW TM ++G G F E
Sbjct: 115 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 174
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
++DLF +M + P+R TF +L++C+ L G L K + ++ S +
Sbjct: 175 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALV 233
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
D+ G+ L +AL F MP ++ WG + C
Sbjct: 234 DMYGKCRSLDDALCFFYGMPERNWVS-WGAAIAGC 267
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 305/542 (56%), Gaps = 1/542 (0%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH ++ F+ T ++ + + A ++FD +P + WNA+I G+++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L ++ NM+L + D T L +A HL + + VH+ +G DADV V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ YAKC L A VF G+ RT+VSW +I+ + ++L + HM
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD +VS+L++ C + L QGR +H+ + G +++ ++ +L +MY+KCG + +A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M + W AMISGYA+ G EA+ +F M PD +++ S IS C Q G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+LE + Y +D+V + +ALIDM++KCGS+ AR +F ++ VV W+ MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G L+G EA+ L+ M + PN VTFL +L AC H+G + +GW +FNLM +++N
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKIN 456
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P+ HY+C+ DLLGR G L +A + ++ MP++ +WG LL ACK HR++E+GEY A +
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LF ++P + YV+++N+YA WD VA +R MK + K G S V + G+ F V
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 614 ED 615
D
Sbjct: 577 GD 578
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 219/420 (52%), Gaps = 5/420 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ IR N ALL++ M+ + P++ TFP + KAC+ LS + +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD--KMPDRDVASWNAMIVGFAQMGFL 136
+ + F +D+FVQ ++ +YAKC RL A +F+ +P+R + SW A++ +AQ G
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L +F +MR + ++ D+V ++ + A + L +S+H+ + +G++ + + +
Sbjct: 204 MEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC + A+++F ++ ++ WN++I G ++++ + MI RP
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSP--NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D ++ S +S+C +L Q R ++ + + DV + + LI M++KCG ++ AR +F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D DR V W+AMI GY G EA+ L+ AME G P+ VT L ++ C SG +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G WF N + +ID+ + G + A E+ +P + V W +++ C
Sbjct: 442 EGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 185/376 (49%), Gaps = 6/376 (1%)
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
A H + LK +H+ + +G+ + I A + D+ A VF + + WN
Sbjct: 31 ATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP--QIFPWN 88
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+II G + + F D+L Y +M PD T LL +C L GR VH+
Sbjct: 89 AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRL 148
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDG--MCDRTRVSWTAMISGYAQKGDLDEALR 345
GFD DV V N LI++Y+KC + SAR +F+G + +RT VSWTA++S YAQ G+ EAL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
+F M PD V ++S+++ L+ G+ GL+ + +L MY+
Sbjct: 209 IFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCG + A+ LF + ++ W MI+G A NG EA+D+FH+M+ D+RP+ ++ +
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
+ AC G LE+ + + + ++ S + D+ + G + E V +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLD 386
Query: 526 SDAGIWGTLLCACKIH 541
D +W ++ +H
Sbjct: 387 RDVVVWSAMIVGYGLH 402
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 150/322 (46%), Gaps = 13/322 (4%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI W + + E +AL +F M+K D++P+ + + A L D + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+VK + + ++ MYAKC ++ A LFDKM ++ WNAMI G+A+ G+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + +F+ M ++ D +++ A L +S++ + DV + + I
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 198 SAYAKCNDLKMAELVF-RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+AKC ++ A LVF R ++ R VV W+++I G + ++++ YR M G P
Sbjct: 366 DMFAKCGSVEGARLVFDRTLD---RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 257 DVTTVVSLLSSCVCPEALVQG----RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+ T + LL +C + +G L+ H I+ VI+ L + G +D A
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLL----GRAGHLDQA 478
Query: 313 RFLFDGMCDRTRVS-WTAMISG 333
+ M + V+ W A++S
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSA 500
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S + WN+ I A +A+ +F M D+ P+ ++ ACA++ ++
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++ ++ +S + D+F+ + ++DM+AKC ++ A +FD+ DRDV W+AMIVG+ G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + L+ M G+ + VT +GL A H+
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/613 (33%), Positives = 337/613 (54%), Gaps = 9/613 (1%)
Query: 8 PRLNKIYRS---STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
PR +++ + + WN+ I + + +A+ L+++M+ ++P +TF + AC
Sbjct: 437 PRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSAC 496
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
S + +MIH I++S S+ + +++MY +C + A +F+ RD+ SWN
Sbjct: 497 TNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWN 556
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
+MI G AQ G E LF M+ G++ D +T + + + L L + +H I
Sbjct: 557 SMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES 616
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G+ DV++ N I+ Y +C L+ A VF + R V+SW ++IGG + D+ +D
Sbjct: 617 GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRH--RNVMSWTAMIGG--FADQGEDRKA 672
Query: 245 F--YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
F + M DGF+P +T S+L +C+ L +G+ V +H ++ G++LD V N LIS
Sbjct: 673 FELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISA 732
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
YSK G + AR +FD M +R +SW MI+GYAQ G AL+ + M+ G V + +
Sbjct: 733 YSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSF 792
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+S+++ C ALE GK ++ +V V ALI MY+KCGS+ +A+E+F E
Sbjct: 793 VSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTE 852
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
K VV+W MI A +G +ALD F+ M + ++P+ TF ++L AC H+G + +G
Sbjct: 853 KNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRI 912
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
F+ + + ++P + HY C+ LLGR G+ +EA + MP DA +W TLL AC+IH
Sbjct: 913 FSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHG 972
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+ + E+ A +L + A YV ++N+YA GRWD VA +R +M+ ++K PG+S +
Sbjct: 973 NVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWI 1032
Query: 603 HINGKTCTFTVED 615
++ F D
Sbjct: 1033 EVDNIIHEFIAAD 1045
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 273/511 (53%), Gaps = 4/511 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K+ R I+ WNS I + KA LF M+ P+ +T+ I AC ++
Sbjct: 142 KMPRRDVIS-WNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
Y + IH I+++ + D VQ ++++MY KC+ L A ++F + RDV S+N M+ +A
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYA 260
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q ++E+ + LF M GI D VT + L A L K +H ++ G+++D+
Sbjct: 261 QKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIR 320
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V + + +C D+ A+ + R VV +N++I ++++ Y M
Sbjct: 321 VGTALATMFVRCGDVAGAKQALEAFAD--RDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
DG + TT +S+L++C +AL G L+HSH G DV + N+LISMY++CGD+
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPR 438
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR LF+ M R +SW A+I+GYA++ D EA++L+ M++ G P VT L ++S C
Sbjct: 439 ARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN 498
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
S A GK G+K N + NAL++MY +CGSI +A+ +F + ++SW +M
Sbjct: 499 SSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSM 558
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
IAG A +G + A LF +M + L P+++TF +VL C + LE G L+ +
Sbjct: 559 IAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES-G 617
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
+ ++N + + ++ R G L++A + S+
Sbjct: 618 LQLDVNLGNALINMYIRCGSLQDAYEVFHSL 648
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 269/524 (51%), Gaps = 7/524 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
IYR ++ +N+ + K + + LF +M I P+ +T+ + A S
Sbjct: 244 IYRRDVVS-YNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE 302
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ IH V SDI V T + M+ +C + A + + DRDV +NA+I AQ
Sbjct: 303 GKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQ 362
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G E+ +Y MR G+ + T + + A +K L + +HS +G +DV +
Sbjct: 363 HGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQI 422
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ IS YA+C DL A +F + + R ++SWN+II G + +++ Y+ M +
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMPK--RDLISWNAIIAGYARREDRGEAMKLYKQMQSE 480
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G +P T + LLS+C A G+++H + G + + N L++MY +CG I A
Sbjct: 481 GVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEA 540
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ +F+G R +SW +MI+G+AQ G + A +LF M+ G PD +T S++ GC
Sbjct: 541 QNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNP 600
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
ALELG+ GL+ +V + NALI+MY +CGS+ DA E+F++L + V+SWT MI
Sbjct: 601 EALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMI 660
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF-NLMTKVYQ 491
G A GE +A +LF QM +P + TF ++L+AC + L++G +++ Y+
Sbjct: 661 GGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYE 720
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ + + + + G + +A MP + D W ++
Sbjct: 721 LDTGVGN--ALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMI 761
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 263/516 (50%), Gaps = 11/516 (2%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
E N + + + C + ++ IH +V++ DIF+ +++MY KC + A++
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+F KMP RDV SWN++I +AQ GF +K LF M+ G +T + + A
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L K +HS I G D V N+ ++ Y KC DL A VF GI R VVS+N+++
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYR--RDVVSYNTML 256
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G ++ + + M +G PD T ++LL + P L +G+ +H ++ G +
Sbjct: 257 GLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLN 316
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+ V L +M+ +CGD+ A+ + DR V + A+I+ AQ G +EA ++ M
Sbjct: 317 SDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQM 376
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G V + T LS+++ C S AL G+ ++ G +V + N+LI MY++CG +
Sbjct: 377 RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDL 436
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
ARELF +P++ ++SW +IAG A + EA+ L+ QM ++P RVTFL +L AC
Sbjct: 437 PRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSAC 496
Query: 471 THAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
T++ G + +++ + N L + + ++ R G + EA + + + D
Sbjct: 497 TNSSAYSDGKMIHEDILRSGIKSNGHL--ANALMNMYRRCGSIMEAQNVFEGTRAR-DII 553
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLF-ELEPHSAAP 564
W +++ H + E AY+LF E++ P
Sbjct: 554 SWNSMIAGHAQHGSYE----AAYKLFLEMKKEGLEP 585
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/597 (35%), Positives = 315/597 (52%), Gaps = 4/597 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I V +++ A+ +FR M + PN F + AC D + +HG +
Sbjct: 172 SWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAV 231
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V++ + D+F +VDMY+K ++ A +F+KMP DV SWNA I G G + L
Sbjct: 232 VRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRAL 291
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M+ G+ + T+ + +A A +L + +H F + D D V + Y
Sbjct: 292 ELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMY 351
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV-- 258
AK L A VF + R ++ WN++I GC++ + + L+ + M +G DV
Sbjct: 352 AKHGFLDDARKVFDFMPR--RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNR 409
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TT+ S+L S EA+ R VH+ G D VIN LI Y KCG +D A +F
Sbjct: 410 TTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+S T M++ +Q ++A++LF M G PD + S+++ C A E G
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K + +V NAL+ Y+KCGSI DA F LPE+ +VSW+ MI G A +
Sbjct: 530 KQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQH 589
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G ALDLFH+M++ + PN +T +VL AC HAG ++ YF M + + ++ H
Sbjct: 590 GHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEH 649
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM D+LGR GKL++A++ V +MP +++A +WG LL A ++HR+ E+G A +LF LE
Sbjct: 650 YACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLE 709
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + +V +AN YA G WD +A +R +MK + VKK P S V I K TF V D
Sbjct: 710 PEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGD 766
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 215/423 (50%), Gaps = 6/423 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
++ + WN+ I V H+AL L +MK + + PN T + KACA F +
Sbjct: 268 AADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQ 327
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IHG +VK+ D FV +VDMYAK LD A K+FD MP RD+ WNA+I G + G
Sbjct: 328 IHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGR 387
Query: 136 LEKVLCLFYNMRLVGIQADF--VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+VL LF+ MR G+ D T+ + ++ ++ + + VH+ IG+ +D V
Sbjct: 388 HGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVI 447
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I +Y KC L A VF+ E ++S +++ + D +D++ + M+ G
Sbjct: 448 NGLIDSYWKCGQLDYAIKVFK--ESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG 505
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD + SLL++C A QG+ VH+H I F DV N L+ Y+KCG I+ A
Sbjct: 506 LEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDAD 565
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F G+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++S C +G
Sbjct: 566 MAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAG 625
Query: 374 AL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
+ + K+F++ + G+ +ID+ + G + DA EL +P + W +
Sbjct: 626 LVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGAL 685
Query: 432 IAG 434
+
Sbjct: 686 LGA 688
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 200/399 (50%), Gaps = 11/399 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H H++KS + ++ +Y++C A +FD++PD SW++++ ++ G
Sbjct: 26 LHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGM 83
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
L F MR G+ + + + + A + VH+ + + DV V N
Sbjct: 84 PRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVR---FGAQVHALAVATRLVHDVFVANA 140
Query: 196 WISAYAKCNDLKMAELVFR---GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
++ Y + A +F G+ G R VSWN++I D+ D++ +R M++
Sbjct: 141 LVAVYGGFGMVDEARRMFDEYVGVG-GERNAVSWNTMISAYVKNDQSGDAIGVFREMVWS 199
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G RP+ ++++C L GR VH + G++ DV N L+ MYSK GDI+ A
Sbjct: 200 GERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMA 259
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F+ M VSW A ISG G AL L M+++G VP++ T+ S++ C +
Sbjct: 260 ATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGA 319
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GA LG+ + + V L+DMY+K G + DAR++F +P + ++ W +I
Sbjct: 320 GAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALI 379
Query: 433 AGCALNGEFVEALDLFHQMME--LDLRPNRVTFLAVLQA 469
+GC+ +G E L LFH+M + LDL NR T +VL++
Sbjct: 380 SGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKS 418
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 204/465 (43%), Gaps = 11/465 (2%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+S + + ALL FR M+ + N P + K CA D + +H
Sbjct: 70 SWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP--DVRFGAQVHALA 126
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM----PDRDVASWNAMIVGFAQMGFL 136
V + D+FV +V +Y +D A ++FD+ +R+ SWN MI + +
Sbjct: 127 VATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQS 186
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ +F M G + + + A ++ L + VH + G + DV N
Sbjct: 187 GDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANAL 246
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+K D++MA VF + VVSWN+ I GC +L M G P
Sbjct: 247 VDMYSKLGDIEMAATVFEKMPAA--DVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVP 304
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+V T+ S+L +C A GR +H + D D V L+ MY+K G +D AR +F
Sbjct: 305 NVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVF 364
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL--VTVLSMISGCGQSGA 374
D M R + W A+ISG + G E L LF M G D+ T+ S++ S A
Sbjct: 365 DFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEA 424
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ + A GL + V N LID Y KCG + A ++F ++S TTM+
Sbjct: 425 ICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTA 484
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ +A+ LF QM+ L P+ ++L ACT E+G
Sbjct: 485 LSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 162/366 (44%), Gaps = 13/366 (3%)
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+HS + G+ A S N ++ Y++C A VF I + VSW+S++ +
Sbjct: 26 LHSHLLKSGLLAGFS--NHLLTLYSRCRLPSAARAVFDEIPDPCH--VSWSSLVTAYSNN 81
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D+L +R M G + + +L C + G VH+ + DV V
Sbjct: 82 GMPRDALLAFRAMRGRGVPCNEFALPVVLK---CAPDVRFGAQVHALAVATRLVHDVFVA 138
Query: 297 NTLISMYSKCGDIDSARFLFDGMC----DRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
N L+++Y G +D AR +FD +R VSW MIS Y + +A+ +F M
Sbjct: 139 NALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVW 198
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
+GE P+ +++ C S LE G+ G + +V NAL+DMYSK G I
Sbjct: 199 SGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEM 258
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A +F +P VVSW I+GC +G AL+L QM L PN T +VL+AC
Sbjct: 259 AATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAG 318
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 532
AG G M K E + D+ + G L +A MP + D +W
Sbjct: 319 AGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDDARKVFDFMP-RRDLILWN 376
Query: 533 TLLCAC 538
L+ C
Sbjct: 377 ALISGC 382
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 337/605 (55%), Gaps = 9/605 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKN-----DIEPNNLTFPFIAKACAKLSDFLY 72
T+ WN+ +R + E + L LFR+M + P+N + K+CA L L
Sbjct: 201 TVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLL 260
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++IHG + K D+FV + ++D+Y KC +++ A K+F + P DV W ++I G+ Q
Sbjct: 261 GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQ 320
Query: 133 MGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G E L F M + + D VT++ + A + L +SVH F G+D +
Sbjct: 321 SGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLC 380
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N+ + Y K +K A +FR + + + ++SW++++ D L+ + M+
Sbjct: 381 LANSLLHLYGKTGSIKNASNLFREMSD--KDIISWSTMVACYADNGAETDVLDLFNEMLD 438
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+P+ TVVS+L +C C L +G +H ++YGF+++ +V L+ MY KC +
Sbjct: 439 KRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEK 498
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A LF+ M + ++W + SGYA G + E++ +F M ++G PD + ++ +++ +
Sbjct: 499 AVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISE 558
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
G L+ + G ++N + +LI++Y+KC SI DA ++F + K VV+W+++
Sbjct: 559 LGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 618
Query: 432 IAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
IA +G+ EAL LF+QM D +PN VTF+++L AC+H+G +++G F++M Y
Sbjct: 619 IAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKY 678
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
++ P HY+ M DLLGR G+L ALD + +MP+++ IWG LL AC+IH+NI++GE
Sbjct: 679 KLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVA 738
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
A LF L+P+ A Y+ ++NIY++ W LR ++K ++ K GQS+V + + +
Sbjct: 739 AKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRS 798
Query: 611 FTVED 615
F D
Sbjct: 799 FIAGD 803
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/540 (27%), Positives = 247/540 (45%), Gaps = 30/540 (5%)
Query: 39 LLLFRRMKKND---------IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI 89
L++F ++ +N +E NL + C+KLS SQ+ H +K+ D
Sbjct: 116 LIIFTKIVENSELLKFHEWLMERRNLLVKLLETCCSKLS---ISQL-HSQCLKAGLVHDS 171
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
F+ T + +YA+ + A+KLF + P R V WNA++ + G + L LF M V
Sbjct: 172 FIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNV 231
Query: 150 GI-----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
+ D +V ++ + L L K +H F + +D D+ V + I Y KC
Sbjct: 232 SSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCG 291
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY-DGFRPDVTTVVS 263
+ A VF +E VV W SII G + +L F+ M+ + PD T+VS
Sbjct: 292 QMNDAVKVF--MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVS 349
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+ S+C GR VH G D + + N+L+ +Y K G I +A LF M D+
Sbjct: 350 VASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKD 409
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+SW+ M++ YA G + L LF M P+ VTV+S++ C LE G
Sbjct: 410 IISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 469
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
A + G + V AL+DMY KC S A +LF +P+K V++W + +G A NG E
Sbjct: 470 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHE 529
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SC 501
++ +F M+ RP+ + + +L + G L++ L V + E N + +
Sbjct: 530 SMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA---VCLHAFVIKNGFENNQFIGAS 586
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ ++ + +++A + M K D W +++ A H GE +++ HS
Sbjct: 587 LIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQ---GEEALKLFYQMANHS 642
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 11/230 (4%)
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
GL + + L +Y++ SI A +LF P +TV W ++ GE+VE L L
Sbjct: 165 AGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSL 224
Query: 448 FHQM-----MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
F QM + ++ RP+ + L++C L G + KV +++ ++ S +
Sbjct: 225 FRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKV-RIDGDMFVGSAL 283
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
DL + G++ +A+ P K D +W +++ + + E+ R+ E S
Sbjct: 284 IDLYTKCGQMNDAVKVFMEYP-KPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSP 342
Query: 563 AP--YVEMANIYALGGRWDGVANLRTMMKRNQV--KKFPGQSLVHINGKT 608
P V +A+ A + ++ +KR + K SL+H+ GKT
Sbjct: 343 DPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKT 392
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/607 (33%), Positives = 315/607 (51%), Gaps = 2/607 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + + ++ WN I + +A LF M++ +EP+ TF I AC+ +
Sbjct: 100 RLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + +H ++++ ++ V ++ MYAKC + A ++FD M RD SW +
Sbjct: 160 ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 219
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+A+ G+ ++ L ++ M G++ +T M + A L K +H+ + +
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHS 279
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV V Y KC +K A VF + R V++WN++IGG + +++ +
Sbjct: 280 DVRVSTALTKMYIKCGAVKDAREVFECLPN--RDVIAWNTMIGGLVDSGQLEEAHGMFHR 337
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ + PD T +++LS+C P L G+ +H+ + G DV N LI+MYSK G
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ AR +FD M R VSWTA++ GYA G + E+ F M G + +T + ++
Sbjct: 398 MKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKA 457
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C AL+ GK G+ ++ V NAL+ MY KCGS+ DA + + + VV+W
Sbjct: 458 CSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTW 517
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T+I G A NG +EAL F M ++RPN TF+ V+ AC +E+G F M K
Sbjct: 518 NTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRK 577
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
Y + P HY+CM D+L R G L EA D + +MP K A +WG LL AC+ H N+EIGE
Sbjct: 578 DYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGE 637
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A + +LEP +A YV ++ IYA G W VA LR +MK VKK PG+S + + G+
Sbjct: 638 QAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEV 697
Query: 609 CTFTVED 615
+F D
Sbjct: 698 HSFVAGD 704
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 274/536 (51%), Gaps = 17/536 (3%)
Query: 2 AASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA 61
AAS L R +++ +SS I + D A +L + K + + ++ + +
Sbjct: 1 AASLLISRWSRVDKSSMIPT-------STDGWYAPADVLQYLHQKGSQV--DSYDYVKLL 51
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
++C K D + +H HI++ ++++ T++ +Y C ++ A +LFDK ++ V
Sbjct: 52 QSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVV 111
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
SWN MI G+A G ++ LF M+ G++ D T + + A L+ + VH
Sbjct: 112 SWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRV 171
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+ G+ + +V N IS YAKC ++ A VF + R VSW ++ G +
Sbjct: 172 MEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS--RDEVSWTTLTGAYAESGYAQE 229
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
SL Y M+ +G RP T +++LS+C AL +G+ +H+ + DV V L
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY KCG + AR +F+ + +R ++W MI G G L+EA +F M PD VT
Sbjct: 290 MYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVT 349
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
L+++S C + G L GK A GL +V NALI+MYSK GS+ DAR++F +P
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 409
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ VVSWT ++ G A G+ VE+ F +M++ + N++T++ VL+AC++ L+ WG
Sbjct: 410 KRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALK--WG 467
Query: 482 YFNLMTKVYQVN--PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ +V + +L + + + + G +++A+ + M + D W TL+
Sbjct: 468 K-EIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLI 521
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 326/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V + + + LF +M++ + + + ++CA + ++ +H H +
Sbjct: 220 WGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAI 279
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F SD V T +VD+YAK L A + F +P +V + NAM+VG + G + +
Sbjct: 280 KNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQ 339
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G+ D +++ G+ A K VH + G D DV V N + Y
Sbjct: 340 LFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYG 399
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A LVF+ +E+ R VSWN+II + ++D++ M+ G PD T
Sbjct: 400 KCKALVEAYLVFQEMEQ--RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTY 457
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C ++L G +VH I G LD V +T++ MY KCG I A+ L D +
Sbjct: 458 GSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGG 517
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW ++ISG++ +EA R F M G PD T +++ C +ELGK
Sbjct: 518 QELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQI 577
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ + + + L+DMY+KCG++ D+ +F + VSW MI G AL+G+
Sbjct: 578 HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQG 637
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+EAL++F +M ++ PN TF+AVL+AC+H G L+ G YF+LMT Y++ P+L H++C
Sbjct: 638 LEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFAC 697
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR +EAL+F++SMPI++DA +W TLL CKI +++E+ E A + L+P
Sbjct: 698 MVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDD 757
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A+ Y+ ++N+YA G+W V+ R +M++ +++K PG S + + + F V D
Sbjct: 758 ASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGD 811
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 232/520 (44%), Gaps = 4/520 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I ++ L M + + + T + K+C L D IH V
Sbjct: 119 WNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAV 178
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ +D+ + +VDMY KC LD A + F M +R+ SW A I G Q + +
Sbjct: 179 KTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGME 238
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ +G+ ++ LS + +H+ I +D V + YA
Sbjct: 239 LFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYA 298
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K +L A F G+ V + N+++ G +++ ++ M G DV ++
Sbjct: 299 KAGNLVDARRAFIGLPH--HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISL 356
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ S+C + QG VH + GFD+DV V N ++ +Y KC + A +F M
Sbjct: 357 SGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 416
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ Q ++ + M +G PD T S++ C +LE G
Sbjct: 417 RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVV 476
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
A GL + V + ++DMY KCG+I +A++L + + +VSW ++I+G +L +
Sbjct: 477 HGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQS 536
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA F +M+++ ++P+ T+ VL C + +E G + K + E S
Sbjct: 537 EEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYIS-ST 595
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ D+ + G + ++L + K D W ++C +H
Sbjct: 596 LVDMYAKCGNMPDSLLMFEKAR-KLDFVSWNAMICGYALH 634
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 193/457 (42%), Gaps = 35/457 (7%)
Query: 56 TFPFIAKACAKL--SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD---------- 103
TF + + CA S Q H ++ S F FV ++ MYA+C
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 104 ---------------------RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
D A LF MPD DV SWN +I G+ Q G + L
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
M G+ D T+ L ++ L+L +H+ + G++ DV + + Y K
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
C L A F G+ E R VSW + I GC +++ + + M G
Sbjct: 199 CRSLDDALRFFHGMGE--RNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYA 256
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S SC L R +H+H I F D V ++ +Y+K G++ AR F G+
Sbjct: 257 SAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHH 316
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
+ AM+ G + G EA++LF M +G D++++ + S C + G
Sbjct: 317 NVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVH 376
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A G +V V NA++D+Y KC ++ +A +F + ++ VSW +IA N +
Sbjct: 377 CLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 436
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ + ++M+ + P+ T+ +VL+AC LE G
Sbjct: 437 DTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYG 473
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 147/350 (42%), Gaps = 16/350 (4%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYD 252
NT ++AY D A +F + + VVSWN++I G C +G F +S+ M
Sbjct: 89 NTMLTAYVHAGDTDTAASLFGTMPD--PDVVSWNTLISGYCQHG-MFRNSVGLSMEMSRR 145
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G D TT+ LL SC + L G +H+ + G + DV + L+ MY KC +D A
Sbjct: 146 GVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDA 205
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
F GM +R VSW A I+G Q + LF M+ G S C
Sbjct: 206 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAM 265
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L + +A + +V A++D+Y+K G++ DAR F LP V + M+
Sbjct: 266 PCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMM 325
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-LMTKVYQ 491
G G EA+ LF M + + ++ V AC GYF L
Sbjct: 326 VGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVK------GYFQGLQVHCLA 379
Query: 492 VNPELNHYSC----MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
V + C + DL G+ L EA Q M + D+ W ++ A
Sbjct: 380 VKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 428
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 324/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS I V + + +AL LF +M+++ ++P+ +T + ACA + +H H +
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ +DI ++ +++D+Y+KC ++ A+K F ++ WN M+V + Q+ L
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFE 449
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M++ G+ + T + + L L + +H+ I G +V VC+ I YA
Sbjct: 450 IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L +A + R + E VVSW ++I G D F ++L + M Y G + D
Sbjct: 510 KYGQLALALRILRRLPED--DVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGF 567
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +S+C AL QG+ +H+ GF D+S+ N LIS+Y++CG I A F+ + D
Sbjct: 568 ASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD 627
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SW +++SG AQ G +EAL++F M ++ T S IS ++ G+
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI 687
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G V N+LI +Y+K GSI DA F + E+ V+SW MI G + +G
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+EAL LF +M + PN VTF+ VL AC+H G +++G YF M K++ + P+ HY C
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVC 807
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G+L A+++++ MPI +DA IW TLL AC IH+NIEIGE A+ L ELEP
Sbjct: 808 VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPED 867
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++NIYA+ +W R +MK VKK PG+S + + F D
Sbjct: 868 SATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGD 921
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 259/558 (46%), Gaps = 22/558 (3%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAH------KALLLFRRMKKNDIEPNNLTFPFIAK 62
+ N + R S + NS + D+ H K + L M++ + N + ++ +
Sbjct: 10 KTNNVVRVSGVGATNSH---SFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLE 66
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
C + +H I KS F + + ++VD Y + A K+FD+ +R V S
Sbjct: 67 GCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFS 126
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFG 181
WN MI F +V CLF M GI + T G+ +A + + +K VHS
Sbjct: 127 WNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRT 186
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+ G D+ V N I Y+K ++ A+ VF I ++ +V+W ++I G + ++
Sbjct: 187 FYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI--CMKDIVTWVAMISGLSQNGLEEE 244
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
++ + M P + S+LS+ + G +H I +GF + V N L++
Sbjct: 245 AILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVA 304
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
+YS+ + SA +F M R VS+ ++ISG Q+G D AL LF M+ PD +T
Sbjct: 305 LYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCIT 364
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
V S++S C GAL G ++A G+ ++++ +L+D+YSKC + A + F
Sbjct: 365 VASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTE 424
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ +V W M+ ++ ++F QM + PN+ T+ ++L+ CT G L G
Sbjct: 425 TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE- 483
Query: 482 YFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
+ T V + +LN Y C + D+ + G+L AL ++ +P + D W ++
Sbjct: 484 --QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYV 540
Query: 540 IH----RNIEIGEYVAYR 553
H +++ E + YR
Sbjct: 541 QHDMFSEALQLFEEMEYR 558
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/596 (35%), Positives = 325/596 (54%), Gaps = 12/596 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLF--RRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
R+ + W IR N+++ ++ F R++K E +N+ F + KAC++L +
Sbjct: 98 RNPDLYSWKVMIRWYF-LNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDE 156
Query: 73 SQMIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ +H IVK SP D FV T +VDMYAKC ++ + ++FD++ DR+V W +MIVG+
Sbjct: 157 GRKLHCQIVKVGSP---DSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGY 213
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
Q L++ L LF MR ++ + T+ L A L K VH + I G D +
Sbjct: 214 VQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNS 273
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+ + Y KC D++ A VF E +VSW ++I G ++L +
Sbjct: 274 FLVTPLLDLYFKCGDIRDAFSVFD--ELSTIDLVSWTAMIVGYAQRGYPREALKLFTDER 331
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ P+ T S+LS+C +L GR VH GI G + D + N L+ MY+KC I
Sbjct: 332 WKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIG 390
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR++F+ + D+ ++W ++ISGY Q G EAL LF M + PD +T++S++S C
Sbjct: 391 DARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACA 450
Query: 371 QSGALELGKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
GA +G YA GL +V V AL++ Y+KCG AR +F + EK ++W+
Sbjct: 451 SVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWS 510
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MI G + G+ +L+LF M++ L PN V F +L AC+H+G L +GW YFN M +V
Sbjct: 511 AMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQV 570
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Y P + HY+CM DLL R G+L+EALDF++ +PI+ D + G L C++H ++GE
Sbjct: 571 YNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEV 630
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
R+ EL P A YV M+N+YA GRW + +MK+ + K PG SLV I
Sbjct: 631 AVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIE 686
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 218/433 (50%), Gaps = 21/433 (4%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +V D+ +T +V +Y ++CA +FD++ + D+ SW MI +
Sbjct: 58 IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDS 117
Query: 136 LEKVLCLFYNMRLVGI--QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+++ FYN RL + D V + +A + + +H + +G D V
Sbjct: 118 YSEIV-QFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVL 175
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ YAKC +++ + VF I + R VV W S+I G D + L + M
Sbjct: 176 TGLVDMYAKCREVEDSRRVFDEILD--RNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGL 233
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+ T+ SL+++C AL QG+ VH + I GFDL+ ++ L+ +Y KCGDI A
Sbjct: 234 VEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAF 293
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD + VSWTAMI GYAQ+G EAL+LF +P+ VT S++S C Q+G
Sbjct: 294 SVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTG 353
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+L +G+ G +D NAL+DMY+KC IGDAR +F + +K V++W ++I+
Sbjct: 354 SLNMGRSVHCLGIKLGSEDATFE-NALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIIS 412
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G NG EAL+LF QM + P+ +T ++VL AC G Y+V
Sbjct: 413 GYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVG--------------AYRVG 458
Query: 494 PELNHYSCMADLL 506
L+ Y+ A LL
Sbjct: 459 SSLHGYAIKAGLL 471
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 146/312 (46%), Gaps = 4/312 (1%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
K +S L+ +H+ + G+ D+ +S Y ++ A L+F I + SW
Sbjct: 50 KTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNP--DLYSWKV 107
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSL-LSSCVCPEALVQGRLVHSHGIHY 287
+I D + + + FY + V S+ L +C +GR +H +
Sbjct: 108 MIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKV 167
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G D V+ L+ MY+KC +++ +R +FD + DR V WT+MI GY Q L E L LF
Sbjct: 168 G-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLF 226
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M + T+ S+++ C + GAL GKW Y G N + L+D+Y KC
Sbjct: 227 NRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKC 286
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G I DA +F L +VSWT MI G A G EAL LF DL PN VT +VL
Sbjct: 287 GDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVL 346
Query: 468 QACTHAGFLEKG 479
AC G L G
Sbjct: 347 SACAQTGSLNMG 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL C +L R +H+ + +G D+ L+S+Y G ++ AR +FD + +
Sbjct: 44 SLLGICKTVSSL---RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNP 100
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFA-MEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
SW MI Y E ++ + + D V ++ C + + G+
Sbjct: 101 DLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKL 160
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G D+ V L+DMY+KC + D+R +F + ++ VV WT+MI G N
Sbjct: 161 HCQIVKVGSPDS-FVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCL 219
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYS 500
E L LF++M E + N+ T +++ ACT G L +G W + ++ + +N L +
Sbjct: 220 KEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFL--VT 277
Query: 501 CMADLLGRKGKLKEAL 516
+ DL + G +++A
Sbjct: 278 PLLDLYFKCGDIRDAF 293
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/664 (34%), Positives = 346/664 (52%), Gaps = 64/664 (9%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
LPP S++ WN IR A+ L+R+MK P++ TFPF+ KACA
Sbjct: 217 LPPS------PSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACA 270
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVAS 122
LS +H + +S F S++FV +V MY KC L A+ +FD + R D+ S
Sbjct: 271 NLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVS 330
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA-DFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
WN+++ + L LF+ M + + D ++++ + A + VH F
Sbjct: 331 WNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFS 390
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD- 240
I G+ DV V N + YAKC ++ A VF+ ++ + VVSWN+++ G + + +
Sbjct: 391 IRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMK--FKDVVSWNAMVTGYSQAGRLEH 448
Query: 241 ----------------------------------DSLNFYRHMIYDGFRPDVTTVVSLLS 266
++L+ +R M G RP+V T+VSLLS
Sbjct: 449 ALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLS 508
Query: 267 SCVCPEALVQGRLVHSHGIHYGFDLD--------VSVINTLISMYSKCGDIDSARFLFDG 318
+CV AL+ G+ H + I + +LD + VIN LI MY+KC + AR +FD
Sbjct: 509 ACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDS 568
Query: 319 MC--DRTRVSWTAMISGYAQKGDLDEALRLF---FAMEAAGEVPDLVTVLSMISGCGQSG 373
+ DR V+WT MI GYAQ GD + AL+LF F M+ + + P+ T+ + C +
Sbjct: 569 VSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIK-PNDFTLSCALVACARLA 627
Query: 374 ALELGKWFDNYACSGGLKDNVM--VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
AL G+ Y +VM V N LIDMYSK G + A+ +F +P++ VSWT++
Sbjct: 628 ALRFGRQVHAYVLRN-FYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSL 686
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ G ++G +AL +F +M ++ L P+ +TFL VL AC+H+G ++ G +FN M+K +
Sbjct: 687 MTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFG 746
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V+P HY+CM DL GR G+L EA+ + MP++ +W LL AC++H N+E+GE+ A
Sbjct: 747 VDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAA 806
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
RL ELE + Y ++NIYA RW VA +R MKR +KK PG S + TF
Sbjct: 807 NRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATF 866
Query: 612 TVED 615
V D
Sbjct: 867 YVGD 870
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 153/538 (28%), Positives = 245/538 (45%), Gaps = 58/538 (10%)
Query: 56 TFPFIA-KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK 114
T P A K C L+ +++++H + + T ++ Y + A L ++
Sbjct: 162 TIPITALKECNSLA---HAKLLHQQSIMQGLL--FHLATNLIGTYIASNSTAYAILLLER 216
Query: 115 MPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
+P V WN +I +G V L+ M+ +G D T + +A + LS
Sbjct: 217 LPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLS 276
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI-EEGLRTVVSWNSIIG 231
L S+H+ G ++V VCN +S Y KC L+ A +F + G++ +VSWNS++
Sbjct: 277 LGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVS 336
Query: 232 GCTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ + +L + M PDV ++V++L +C A ++GR VH I G
Sbjct: 337 AYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLV 396
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
DV V N ++ MY+KCG ++ A +F M + VSW AM++GY+Q G L+ AL LF M
Sbjct: 397 DDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERM 456
Query: 351 EAA-----------------------------------GEVPDLVTVLSMISGCGQSGAL 375
G P++VT++S++S C GAL
Sbjct: 457 TEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGAL 516
Query: 376 ELGKWFDNYACSGGLK--------DNVMVCNALIDMYSKCGSIGDARELFYALPEK--TV 425
GK YA L D++ V N LIDMY+KC S AR++F ++ K V
Sbjct: 517 LHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDV 576
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELD--LRPNRVTFLAVLQACTHAGFLEKGWGYF 483
V+WT MI G A +G+ AL LF M ++D ++PN T L AC L G
Sbjct: 577 VTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVH 636
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + + + L +C+ D+ + G + A +MP + +A W +L+ +H
Sbjct: 637 AYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMH 693
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 159/343 (46%), Gaps = 17/343 (4%)
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F N RL+ +T + + HAK L + H+ + I Y
Sbjct: 152 FTNTRLLSCATIPITALKECNSLAHAKLLHQQSIMQGLLFHLATNL--------IGTYIA 203
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
N A L+ + +V WN +I + D YR M G+ PD T
Sbjct: 204 SNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFP 263
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+ +C +L G +H+ GF +V V N ++SMY KCG + A +FD +C R
Sbjct: 264 FVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHR 323
Query: 323 ---TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
VSW +++S Y D + AL LF M + PD++++++++ C A G
Sbjct: 324 GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRG 383
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ ++ GL D+V V NA++DMY+KCG + +A ++F + K VVSW M+ G +
Sbjct: 384 RQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQA 443
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
G AL LF +M E ++ + VT+ AV+ G+ ++G G
Sbjct: 444 GRLEHALSLFERMTEENIELDVVTWTAVI-----TGYAQRGQG 481
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/594 (36%), Positives = 318/594 (53%), Gaps = 4/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + +AL L+ R+ I P+ TFP + ++CA D + + +H H+V
Sbjct: 103 WNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVV 162
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+ V ++ MY KC + A LFDKMP RD SWNAMI G+ + + L
Sbjct: 163 RFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLE 222
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ MR + I D +T+ + A L +HS+ + D ++SV N+ I Y
Sbjct: 223 LFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYL 282
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K AE VF G+E R VVSW +II GC D +L Y+ M G PD T+
Sbjct: 283 SVGHWKEAESVFSGME--CRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTI 340
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C L G +H G L V V N+LI MYSKC I+ A +F + D
Sbjct: 341 ASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPD 400
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SWT++I+G EAL +FF P+ VT++S +S C + GAL GK
Sbjct: 401 KDVISWTSVINGLRINNRCFEAL-IFFRKMILKSKPNSVTLISALSACARVGALMCGKEI 459
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+A G+ + + NA++D+Y +CG + A F L EK V +W ++ G A G+
Sbjct: 460 HAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKG 518
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
++LF +M+E ++ P+ VTF+++L AC+ +G + +G YF M Y + P L HY+C
Sbjct: 519 AMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYAC 578
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR GKL EA +F++ MPIK D IWG LL AC+IHR++ +GE A +F+ + S
Sbjct: 579 VVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAES 638
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y+ + N+YA G+WD VA +R MK + PG S V + GK F D
Sbjct: 639 IGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGD 692
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/539 (29%), Positives = 259/539 (48%), Gaps = 38/539 (7%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
++ M+ + + A+ +F +M +RD+ SWN ++ G+ + GF ++ LCL++ + GI+
Sbjct: 73 NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T + ++ A L + VH+ + D DV V N I+ Y KC D+ A ++
Sbjct: 133 PDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARML 192
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + R +SWN++I G D+ + L + M PD+ T+ S++S+C
Sbjct: 193 FDKMPT--RDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
G +HS+ + +D ++SV N+LI MY G A +F GM R VSWT +IS
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G D+AL + ME G +PD VT+ S++S C G L++G A G
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
V+V N+LIDMYSKC I A E+F+ +P+K V+SWT++I G +N EAL F +M+
Sbjct: 371 YVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI 430
Query: 453 ELDLRPNRVTFLAVLQACT-----------HAGFLEKGWGY--------FNLMTKVYQVN 493
L +PN VT ++ L AC HA L+ G G+ +L + ++
Sbjct: 431 -LKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMR 489
Query: 494 PELNHYSCMADLLG----------RKGKLKEALDFVQSM---PIKSDAGIWGTLLCACKI 540
LN ++ +G +KGK ++ + M I D + +LLCAC
Sbjct: 490 TALNQFNLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSR 549
Query: 541 HRNIEIG-EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
+ G EY ++ ++ H A + L GR + ++R +K P
Sbjct: 550 SGMVTEGLEY--FQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPA 606
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 191/358 (53%), Gaps = 16/358 (4%)
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + N +S + + D+ A VF + G R + SWN ++GG T FD++L Y +
Sbjct: 69 VRLGNALLSMFVRFGDVGNAWNVFGRM--GERDLFSWNVLVGGYTKAGFFDEALCLYHRI 126
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
++ G RPDV T S+L SC LV+GR VH+H + + FD+DV V+N LI+MY KCGD+
Sbjct: 127 LWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDV 186
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
SAR LFD M R R+SW AMISGY + + E L LFF M PDL+T+ S+IS C
Sbjct: 187 VSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISAC 246
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
G LG +Y N+ V N+LI MY G +A +F + + VVSWT
Sbjct: 247 ELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWT 306
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
T+I+GC N +AL+ + M P+ VT +VL AC G L+ G K+
Sbjct: 307 TIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMG-------MKL 359
Query: 490 YQVNPELNHY------SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+++ H + + D+ + ++++AL+ +P K D W +++ +I+
Sbjct: 360 HELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDK-DVISWTSVINGLRIN 416
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 123/248 (49%), Gaps = 2/248 (0%)
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
L V + N L+SM+ + GD+ +A +F M +R SW ++ GY + G DEAL L+ +
Sbjct: 67 LSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRI 126
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
AG PD+ T S++ C + L G+ + +V V NALI MY KCG +
Sbjct: 127 LWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDV 186
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
AR LF +P + +SW MI+G N E +E L+LF +M EL + P+ +T +V+ AC
Sbjct: 187 VSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISAC 246
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
G G + + + + ++ Y+ + + G KEA M + D
Sbjct: 247 ELLGDERLGTQLHSYVVRT-AYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECR-DVVS 304
Query: 531 WGTLLCAC 538
W T++ C
Sbjct: 305 WTTIISGC 312
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD-NVMV 396
G+L++AL+ +M+ + +++I C G++ S + +V +
Sbjct: 12 GNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRL 71
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
NAL+ M+ + G +G+A +F + E+ + SW ++ G G F EAL L+H+++ +
Sbjct: 72 GNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGI 131
Query: 457 RPNRVTFLAVLQACTHAGFLEKG 479
RP+ TF +VL++C A L +G
Sbjct: 132 RPDVYTFPSVLRSCAGAMDLVRG 154
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS------DFLY 72
+ WN + K + + LF+RM +++I P+++TF + AC++ ++
Sbjct: 502 VGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQ 561
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMI 127
++ HI ++ +VD+ + +L+ A++ ++MP + D A W A++
Sbjct: 562 RMKVNYHIT-----PNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 324/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS I V + + +AL LF +M+++ ++P+ +T + ACA + +H H +
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ +DI ++ +++D+Y+KC ++ A+K F ++ WN M+V + Q+ L
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFE 449
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M++ G+ + T + + L L + +H+ I G +V VC+ I YA
Sbjct: 450 IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L +A + R + E VVSW ++I G D F ++L + M Y G + D
Sbjct: 510 KYGQLALALRILRRLPED--DVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGF 567
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +S+C AL QG+ +H+ GF D+S+ N LIS+Y++CG I A F+ + D
Sbjct: 568 ASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD 627
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SW +++SG AQ G +EAL++F M ++ T S IS ++ G+
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI 687
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G V N+LI +Y+K GSI DA F + E+ V+SW MI G + +G
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+EAL LF +M + PN VTF+ VL AC+H G +++G YF M K++ + P+ HY C
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVC 807
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G+L A+++++ MPI +DA IW TLL AC IH+NIEIGE A+ L ELEP
Sbjct: 808 VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPED 867
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++NIYA+ +W R +MK VKK PG+S + + F D
Sbjct: 868 SATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGD 921
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 250/519 (48%), Gaps = 5/519 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS-DFLYSQMI 76
++ WN I V + + LFRRM I PN TF + KAC F Y + +
Sbjct: 123 SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQV 182
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H F S V ++D+Y+K ++ A K+F+ + +D+ +W AMI G +Q G
Sbjct: 183 HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E+ + LF +M I + + A+ + L + +H I G ++ VCN
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++ Y++ L AE +F + R VS+NS+I G D +L + M D +P
Sbjct: 303 VALYSRSRKLISAERIFSTMNS--RDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TV SLLS+C AL +G +HSH I G D+ + +L+ +YSKC D+++A F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
V W M+ Y Q +L ++ +F M+ G +P+ T S++ C GAL
Sbjct: 421 LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY 480
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG+ + G + NV VC+ LIDMY+K G + A + LPE VVSWT MIAG
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYV 540
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ F EAL LF +M ++ + + F + + AC L +G + + +L
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG-QQIHAQSYAAGFGADL 599
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + + L R G+++EA + + K++ W +L+
Sbjct: 600 SINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLV 637
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 259/558 (46%), Gaps = 22/558 (3%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAH------KALLLFRRMKKNDIEPNNLTFPFIAK 62
+ N + R S + NS + D+ H K + L M++ + N + ++ +
Sbjct: 10 KTNNVVRVSGVGATNSH---SFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLE 66
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
C + +H I KS F + + ++VD Y + A K+FD+ +R V S
Sbjct: 67 GCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFS 126
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFG 181
WN MI F +V CLF M GI + T G+ +A + + +K VHS
Sbjct: 127 WNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRT 186
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+ G D+ V N I Y+K ++ A+ VF I ++ +V+W ++I G + ++
Sbjct: 187 FYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI--CMKDIVTWVAMISGLSQNGLEEE 244
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
++ + M P + S+LS+ + G +H I +GF + V N L++
Sbjct: 245 AILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVA 304
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
+YS+ + SA +F M R VS+ ++ISG Q+G D AL LF M+ PD +T
Sbjct: 305 LYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCIT 364
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
V S++S C GAL G ++A G+ ++++ +L+D+YSKC + A + F
Sbjct: 365 VASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTE 424
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ +V W M+ ++ ++F QM + PN+ T+ ++L+ CT G L G
Sbjct: 425 TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE- 483
Query: 482 YFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
+ T V + +LN Y C + D+ + G+L AL ++ +P + D W ++
Sbjct: 484 --QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYV 540
Query: 540 IH----RNIEIGEYVAYR 553
H +++ E + YR
Sbjct: 541 QHDMFSEALQLFEEMEYR 558
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 331/587 (56%), Gaps = 7/587 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF---LYSQMIHG 78
WN IR + AL LFR M+++ + P+N T +A++ A + + +H
Sbjct: 87 WNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHA 146
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + F SD+FV + +++ Y ++ A K+F++M +RDV SW MI FAQ G +
Sbjct: 147 LVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDN 206
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
VL M+ G + + +T++ L A + + V++ G++ADV + N I
Sbjct: 207 VLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIG 266
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC + A F+G+ +R SWN++I G K ++L + M+ DG PDV
Sbjct: 267 MYVKCGCMSDAWKTFKGMP--IRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDV 324
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+VS+LS+ L QGR +H++ + D+ + N+LI+MY+KCGD+ +A +F+
Sbjct: 325 ITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFEN 384
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R VSWTAM+ GY + A LF M+ + + ++S++S C Q GAL+ G
Sbjct: 385 MARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKG 444
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ +Y ++ ++ + +AL+DMY+KCG I A E+F + K ++W MI G A
Sbjct: 445 REIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQ 504
Query: 439 GEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G+ EA+ LF Q+++L D +P+ +T VL ACTH G +++G YFNLM + V P+
Sbjct: 505 GQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIV-PDNE 563
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY C+ DLLGR G L EA +F+Q MPI+ + IWG+LL AC++H +E+G+ + + +L
Sbjct: 564 HYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDL 623
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
P+ +V ++N++A G+WD V +R MM +V+K PG S + +
Sbjct: 624 APNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 232/470 (49%), Gaps = 12/470 (2%)
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK-CDRLDCAY--KLFDKMPDRD 119
ACA ++ +HG +V++ SD V +V + A R D Y K+FD+M
Sbjct: 27 ACASRANLAE---LHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPT 83
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAI---HAKHLSLLKS 176
WN MI G+ L LF MR G+ D T+ + Q++ K + +
Sbjct: 84 AIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDA 143
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH+ IG +D+ V + I+ Y ++ A VF + E R VVSW +I
Sbjct: 144 VHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHE--RDVVSWTLMISAFAQC 201
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
++D+ L M +G +P+ T++SLLS+C A+ +G V++ YG + DV +
Sbjct: 202 GQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIR 261
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N LI MY KCG + A F GM R SW +I G+ Q G EAL +F M + G +
Sbjct: 262 NALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVI 321
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
PD++T++S++S Q G L+ G++ NY + ++++ N+LI+MY+KCG + A +
Sbjct: 322 PDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEII 381
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F + + +VSWT M+ G +F A +LF M D+ + + +++L AC+ G L
Sbjct: 382 FENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGAL 441
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
+KG + + K V ++ S + D+ + G + A + M K
Sbjct: 442 DKGREIHSYI-KEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQ 490
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + + V + A LF MK D+ + + + AC++L + IH
Sbjct: 390 IVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHS 449
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+I + +D+++++ +VDMYAKC +D A ++F +M + +WNAMI G A G ++
Sbjct: 450 YIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKE 509
Query: 139 VLCLFYN-MRLVGIQADFVTVMGLTQAAIH 167
+ LF ++L + D +T+ + A H
Sbjct: 510 AVALFEQLLKLRDPKPDAITLKVVLCACTH 539
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 327/598 (54%), Gaps = 6/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS I + ++ FR M + P+ T + CA D +HG
Sbjct: 170 WNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGL 229
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
VK ++ V +++DMY+KC L A LFDK +++ SWN+MI G+A+ + +
Sbjct: 230 AVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRT 289
Query: 140 LCLFYNMRL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L M+ ++AD T++ + + L LK +H + G+ ++ V N +I
Sbjct: 290 FYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFI 349
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+AY +C L +E VF ++ +TV SWN+++ G +L+ Y M G PD
Sbjct: 350 AAYTRCGALCSSERVFDLMDT--KTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPD 407
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ SLL +C ++L G +H + G +D + +L+S+Y CG +A+ LFD
Sbjct: 408 WFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFD 467
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
GM R+ VSW MI+GY+Q G DEA+ LF M + G P + ++ + C Q AL L
Sbjct: 468 GMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRL 527
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK +A L +++ V +++IDMY+K G IG ++ +F L EK V SW +IAG +
Sbjct: 528 GKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGI 587
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL+LF +M+ L L+P+ TF +L AC+HAG +E G YFN M ++ + P+L
Sbjct: 588 HGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLE 647
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ D+LGR G++ +AL ++ MP D+ IW +LL +C+IH N+ +GE VA +L EL
Sbjct: 648 HYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 707
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP YV ++N++A G+WD V +R MK ++K G S + + GK F + D
Sbjct: 708 EPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGD 765
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 252/474 (53%), Gaps = 15/474 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHK-ALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLY 72
R + QWN+ I A +NE + A+ +F + + +P+N T P + KACA L D
Sbjct: 61 RRKNLFQWNA-IVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGL 119
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
Q+IHG K SD+FV ++ MY KC ++ A K+F+ MP+R++ SWN++I GF++
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179
Query: 133 MGFLEKVLCLFYNMRLVGIQA---DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
GFL++ F M LVG ++ D T++ + + + +VH + +G++ +
Sbjct: 180 NGFLQESFNAFREM-LVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY--- 246
+ V N+ I Y+KC L A+L+F ++ + +VSWNS+IGG Y + D FY
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDK--KNIVSWNSMIGG--YAREEDVCRTFYLLQ 294
Query: 247 RHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ D + D T++++L C+ L + +H + +G + V N I+ Y++
Sbjct: 295 KMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTR 354
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG + S+ +FD M +T SW A++ GYAQ D +AL L+ M +G PD T+ S+
Sbjct: 355 CGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSL 414
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ C + +L G+ +A GL + + +L+ +Y CG A+ LF + +++
Sbjct: 415 LLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 474
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
VSW MIAG + NG EA++LF QM+ ++P + + V AC+ L G
Sbjct: 475 VSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG 528
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 216/426 (50%), Gaps = 8/426 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
+ +AC + D + +H + S F +D + T ++ MY+ C + +FDK+ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
++ WNA++ + + E + +F + + + D T+ + +A L L + +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H + + +DV V N I+ Y KC ++ A VF + E R +VSWNSII G +
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPE--RNLVSWNSIICGFSENG 181
Query: 238 KFDDSLNFYRHMIY--DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+S N +R M+ + F PDV T+V++L C E + +G VH + G + ++ V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAA 353
N+LI MYSKC + A+ LFD + VSW +MI GYA++ D+ L M E A
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
D T+L+++ C + L+ K Y+ GL+ N +V NA I Y++CG++ +
Sbjct: 302 KMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSS 361
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+F + KTV SW ++ G A N + +ALDL+ QM + L P+ T ++L AC+
Sbjct: 362 ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 421
Query: 474 GFLEKG 479
L G
Sbjct: 422 KSLHYG 427
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 182/392 (46%), Gaps = 22/392 (5%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ + + T++ WN+ + ++ KAL L+ +M + ++P+ T + AC+++
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
Y + IHG +++ D F+ +++ +Y C + A LFD M R + SWN MI
Sbjct: 423 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 482
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G++Q G ++ + LF M GIQ + +M + A L L K +H F + +
Sbjct: 483 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 542
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
D+ V ++ I YAK + +++ +F + E + V SWN II G + ++L +
Sbjct: 543 DIFVSSSIIDMYAKGGCIGLSQRIFDRLRE--KDVASWNVIIAGYGIHGRGKEALELFEK 600
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGIHYGFDLDVSVINTLISMY 303
M+ G +PD T +L +C + G ++++ H I + V++ M
Sbjct: 601 MLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVD----ML 656
Query: 304 SKCGDIDSARFLFDGM-CDRTRVSWTAMISGYAQKGDLDEALRLFFA-MEAAGEVPD-LV 360
+ G ID A L + M D W++++S G+L ++ +E E P+ V
Sbjct: 657 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 716
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
+ ++ +G GKW D G +KD
Sbjct: 717 LISNLFAGS--------GKWDDVRRVRGRMKD 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 11/259 (4%)
Query: 264 LLSSCVCPEALVQGRLVH---SHGIHYGFDLDVSVINT-LISMYSKCGDIDSARFLFDGM 319
LL +C + + GR +H S + D V+NT +I+MYS CG +R +FD +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDF---VLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VPDLVTVLSMISGCGQSGALELG 378
+ W A++S Y + ++A+ +F + + E PD T+ +I C L LG
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ A L +V V NALI MY KCG + +A ++F +PE+ +VSW ++I G + N
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180
Query: 439 GEFVEALDLFHQMM--ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
G E+ + F +M+ E P+ T + VL C +EKG L K+ +N EL
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKL-GLNEEL 239
Query: 497 NHYSCMADLLGRKGKLKEA 515
+ + D+ + L EA
Sbjct: 240 MVNNSLIDMYSKCRFLSEA 258
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA-LIDMYSKCGSIGDARELFYALPEK 423
++ CGQ +E+G+ + N V N +I MYS CGS D+R +F L K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+ W +++ N F +A+ +F +++ + + +P+ T V++AC AG L+ G G
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQ 121
Query: 483 F--NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ TK+ V+ + +A + G+ G ++EA+ + MP ++ W +++C
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIA-MYGKCGLVEEAVKVFEHMPERNLVS-WNSIICG 176
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L R+ R + WN I +AL LF +M + ++P++ TF I AC+
Sbjct: 562 LSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS 621
Query: 66 K---LSDFL--YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRD 119
+ D L ++QM++ H ++ T +VDM + R+D A +L ++MP D D
Sbjct: 622 HAGLVEDGLEYFNQMLNLHNIEPKLEH----YTCVVDMLGRAGRIDDALRLIEEMPGDPD 677
Query: 120 VASWNAMIVG---FAQMGFLEKV 139
W++++ +G EKV
Sbjct: 678 SRIWSSLLSSCRIHGNLGLGEKV 700
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 332/602 (55%), Gaps = 6/602 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ QWN+ ++ + + F +M +++ +P+N T P KAC +L + Y +MIH
Sbjct: 5 TLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIH 64
Query: 78 GHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
G + K+ SD++V ++++ MY KC R+ A ++F+++ D+ +W++M+ GF + G
Sbjct: 65 GFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSP 124
Query: 137 EKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + F M + D VT++ L A + L + VH F + G D+S+ N+
Sbjct: 125 YQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNS 184
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAK K A +F+ + E + V+SW+++I ++L + MI DG
Sbjct: 185 LLNCYAKSRAFKEAVNLFKMMAE--KDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTE 242
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+V TV+ +L +C L QGR H I G + +V V L+ MY KC + A +
Sbjct: 243 PNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGA 374
F + + VSW A+ISG+ G ++ F M PD + +L ++ C + G
Sbjct: 303 FSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGF 362
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+ + F +Y G N + +L+++YS+CGS+G+A ++F + K V WT++I G
Sbjct: 363 LKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITG 422
Query: 435 CALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
++G+ +AL+ F+ M+ +++PN VTFL++L AC+HAG + +G F LM Y++
Sbjct: 423 YGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLA 482
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+ + DLLGR G+L A++ + MP I GTLL AC+IH+N E+ E VA +
Sbjct: 483 PNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQ 542
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LFELE + A Y+ M+N+Y + G W+ V LR +K+ +KK +SL+ I K F
Sbjct: 543 LFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVA 602
Query: 614 ED 615
+D
Sbjct: 603 DD 604
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 216/431 (50%), Gaps = 9/431 (2%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
M R + WN ++ ++ E+V+C F M + D T+ +A + +
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 175 KSVHSF-GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ +H F ++ + +D+ V ++ I Y KC + A +F +E+ +V+W+S++ G
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKP--DIVTWSSMVSGF 118
Query: 234 TYGDKFDDSLNFYRHM-IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
++ F+R M PD T+++L+S+C GR VH + GF D
Sbjct: 119 EKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSND 178
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+S++N+L++ Y+K A LF M ++ +SW+ +I+ Y Q G EALR+F M
Sbjct: 179 LSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMID 238
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G P++ TVL ++ C + LE G+ A GL+ V V AL+DMY KC S +
Sbjct: 239 DGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 298
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACT 471
A +F +P+K VVSW +I+G LNG +++ F M +E + RP+ + L VL +C+
Sbjct: 299 AYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCS 358
Query: 472 HAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
GFL++ + + + K + NP + + + +L R G L A + +K D +
Sbjct: 359 ELGFLKQAECFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNASKVFNEIALK-DTVV 415
Query: 531 WGTLLCACKIH 541
W +L+ IH
Sbjct: 416 WTSLITGYGIH 426
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 166/333 (49%), Gaps = 12/333 (3%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
RT+ WN+++ + ++ + + M D +PD T+ L +C + G ++
Sbjct: 4 RTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMI 63
Query: 281 H---SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
H + G DL V ++LI MY KCG + A +F+ + V+W++M+SG+ +
Sbjct: 64 HGFLKKNVTLGSDLYVG--SSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKN 121
Query: 338 GDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +A+ F M A +V PD VT+++++S C + LG+ + G +++ +
Sbjct: 122 GSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSL 181
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N+L++ Y+K + +A LF + EK V+SW+T+IA NG EAL +F++M++
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGT 241
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
PN T L VLQAC A LE+G L + + E+ + + D+ + +EA
Sbjct: 242 EPNVATVLCVLQACAAANDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 517 DFVQSMPIKSDAGIWGTLLCACKI----HRNIE 545
+P K D W L+ + HR+IE
Sbjct: 301 AVFSRIP-KKDVVSWVALISGFTLNGMAHRSIE 332
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 5/306 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L K+ + W++ I V A +AL +F M + EPN T + +ACA +D
Sbjct: 201 LFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAAND 260
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ H ++ +++ V T +VDMY KC + AY +F ++P +DV SW A+I G
Sbjct: 261 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISG 320
Query: 130 FAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
F G + + F M L + D + ++ + + L + HS+ I G D+
Sbjct: 321 FTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDS 380
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + + + Y++C L A VF I L+ V W S+I G K +L + H
Sbjct: 381 NPFIGASLVELYSRCGSLGNASKVFNEI--ALKDTVVWTSLITGYGIHGKGTKALETFNH 438
Query: 249 MIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKC 306
M+ +P+ T +S+LS+C + +G + ++ Y ++ L+ + +
Sbjct: 439 MVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRV 498
Query: 307 GDIDSA 312
G++D+A
Sbjct: 499 GELDTA 504
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/602 (33%), Positives = 324/602 (53%), Gaps = 51/602 (8%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
FR + + P+N T PF+ +AC L + +Q +VDMY K
Sbjct: 167 FRELIRCGARPDNYTLPFVIRACRDLKN---------------------LQMALVDMYVK 205
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C ++ A LFDKM +RD+ +W MI G+A+ G + L LF MR G+ D V ++ +
Sbjct: 206 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 265
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A + + + + DV + I YAKC ++ A +F +EE +
Sbjct: 266 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE--K 323
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
V+SW+++I Y + +L+ +R M+ G PD T+ SLL +C+ L Q R VH
Sbjct: 324 NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVH 383
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL- 340
+ +G ++ V N L+ YS +D A LFDGMC R VSW+ M+ G+A+ GD
Sbjct: 384 AQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYM 443
Query: 341 ---------------------------DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+E+L LF M G VPD V +++++ C + G
Sbjct: 444 NCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG 503
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
A+ + D+Y + +V++ A+IDM++KCG + ARE+F + EK V+SW+ MIA
Sbjct: 504 AMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIA 563
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
+G+ +ALDLF M+ + PN++T +++L AC+HAG +E+G +F+LM + Y V
Sbjct: 564 AYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVR 623
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
++ HY+C+ DLLGR G+L EAL ++SM ++ D G+WG L AC+ H+++ + E A
Sbjct: 624 ADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATS 683
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
L EL+P + Y+ ++NIYA GRW+ VA R +M + ++KK PG + + ++ K+ F+V
Sbjct: 684 LLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSV 743
Query: 614 ED 615
D
Sbjct: 744 GD 745
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 232/467 (49%), Gaps = 40/467 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + +A+++L+LF +M++ + P+ + + ACAKL +++I +I
Sbjct: 227 WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 286
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+ + T M+DMYAKC ++ A ++FD+M +++V SW+AMI + G K L
Sbjct: 287 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 346
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G+ D +T+ L A I+ ++L+ ++ VH+ G+ ++ V N + Y+
Sbjct: 347 LFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYS 406
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKF--------------------- 239
L A +F G+ +R VSW+ ++GG GD
Sbjct: 407 YYRALDDAYGLFDGM--CVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTL 464
Query: 240 ------DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
++SL + M +G PD +V+++ +C A+ + R + + F LDV
Sbjct: 465 PFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDV 524
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ +I M++KCG ++SAR +FD M ++ +SW+AMI+ Y G +AL LF M +
Sbjct: 525 ILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRS 584
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCG 408
G +P+ +T++S++ C +G +E G F ++Y+ +K V +D+ + G
Sbjct: 585 GILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV----VDLLGRAG 640
Query: 409 SIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+ +A +L ++ EK W + C + + V A ++EL
Sbjct: 641 RLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLEL 687
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 230/518 (44%), Gaps = 55/518 (10%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
L F A + + +H +I V ++ Y+ LD AY LF
Sbjct: 77 QRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLF 136
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D M RD SW+ M+ GFA++G F + G + D T+ + +A K+L
Sbjct: 137 DGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ 196
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+ + Y KC +++ A +F ++E R +V+W +IGG
Sbjct: 197 M---------------------ALVDMYVKCREIEDARFLFDKMQE--RDLVTWTVMIGG 233
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
K ++SL + M +G PD +V+++ +C A+ + R++ + F LD
Sbjct: 234 YAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD 293
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
V + +I MY+KCG ++SAR +FD M ++ +SW+AMI+ Y G +AL LF M +
Sbjct: 294 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS 353
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
+G +PD +T+ S++ C L + A G+ N++V N L+ YS ++ D
Sbjct: 354 SGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDD 413
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFV----------------------------EA 444
A LF + + VSW+ M+ G A G+++ E+
Sbjct: 414 AYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANES 473
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-LMTKVYQVNPELNHYSCMA 503
L LF +M E + P++V + V+ AC G + K + + K +Q++ L + M
Sbjct: 474 LVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMI 531
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
D+ + G ++ A + M K+ W ++ A H
Sbjct: 532 DMHAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYH 568
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/526 (36%), Positives = 304/526 (57%), Gaps = 3/526 (0%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
F+ +V+ + + CA KLFDK PD DV WNA++ +++ GF + ++ M++
Sbjct: 108 FLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
+ D + + +A L + + VH G ++DV V N ++ YAKC ++ A
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
VF + + RT+VSW SII G + ++L + M RPD +VS+L +
Sbjct: 228 NAVFGRLVD--RTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYT 285
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
E L G+ +H I G + + ++ +L S+Y+KCG + AR F+ + + + + W A
Sbjct: 286 DVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNA 345
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
MISGY + G +EA+ LF M++ PD +TV S I+ C Q G+LEL +W D Y
Sbjct: 346 MISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSE 405
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+++V+V +LID Y+KCGS+ AR +F +P+K VV W+ M+ G L+G+ E++ LFH
Sbjct: 406 FRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFH 465
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
M + + PN VTF+ +L AC ++G +E+GW F+ M + Y + P HY+C+ DLLGR
Sbjct: 466 AMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRA 524
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L A +FV +MPI+ +WG LL ACKIHR++ +GEY A RLF L+P++ YV+++
Sbjct: 525 GHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLS 584
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
N+YA WD VA +R +M+ + K G S++ INGK F D
Sbjct: 585 NLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGD 630
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 214/418 (51%), Gaps = 3/418 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ +R A+ ++ RM+ + P+ +FP + KAC+ L + +HG I
Sbjct: 141 WNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIF 200
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD+FVQ +V +YAKC + A +F ++ DR + SW ++I G+AQ G + L
Sbjct: 201 RHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALR 260
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR ++ D++ ++ + +A + L KS+H I +G++ + + + S YA
Sbjct: 261 IFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYA 320
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A L F +E +++ WN++I G ++++ +R M RPD TV
Sbjct: 321 KCGHVMVARLFFNQVENP--SLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITV 378
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +++C +L R + + F DV V +LI Y+KCG +D ARF+FD + D
Sbjct: 379 TSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPD 438
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W+AM+ GY G E++ LF AM AG P+ VT + +++ C SG +E G
Sbjct: 439 KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDL 498
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+ G++ ++D+ + G + A +P E V W +++ C ++
Sbjct: 499 FHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 3/317 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI W S I + +AL +F M+K ++ P+ + + +A + D + + IH
Sbjct: 238 TIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIH 297
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G ++K + + ++ +YAKC + A F+++ + + WNAMI G+ + G+ E
Sbjct: 298 GCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAE 357
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF M+ I+ D +TV A L L + + + DV V + I
Sbjct: 358 EAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLI 417
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + MA VF I + + VV W++++ G + +S+ + M G P+
Sbjct: 418 DTYAKCGSVDMARFVFDRIPD--KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPN 475
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T V LL++C + +G + YG + ++ + + G +D A
Sbjct: 476 DVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVM 535
Query: 318 GMCDRTRVS-WTAMISG 333
M VS W A++S
Sbjct: 536 NMPIEPGVSVWGALLSA 552
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL+ + L++ S G + AR+LF P+ V W ++ + +G F A++++
Sbjct: 102 GLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMY 161
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+M + P+ +F VL+AC+ LE G
Sbjct: 162 ARMQVACVSPDGFSFPCVLKACSALPALEMG 192
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/594 (34%), Positives = 318/594 (53%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V + + L LF+ M+ + + + + ++CA LS + +H H +
Sbjct: 250 WSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHAL 309
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F SDI V T +DMYAKC R+ A K+ MP + S+NA+IVG+A+ + L
Sbjct: 310 KSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALK 369
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F + G+ D +T+ G A + + VH + +++ V N + Y
Sbjct: 370 SFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYG 429
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A +F +E R VSWN+II C +++L + MI+ PD T
Sbjct: 430 KCKALAEASDLFDMMER--RDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTY 487
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +AL G +H+ I G D V L+ MY KCG I+ A + D
Sbjct: 488 GSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQ 547
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+T VSW A+ISG++ ++A + F M G PD T +++ C + LGK
Sbjct: 548 KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQI 607
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L+ +V +C+ L+DMYSKCG++ D++ +F P + V+W M+ G A +G
Sbjct: 608 HAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLG 667
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL LF M ++++PN TF++VL+AC H G ++KG YF++M Y ++P+ HYSC
Sbjct: 668 EEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSC 727
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR G++ EAL+ VQ MP ++DA IW LL CKIH N+E+ E L +L+P
Sbjct: 728 MVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQD 787
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ V ++NIYA G W V+ +R MM+ N++KK PG S + + + F V D
Sbjct: 788 SSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGD 841
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/535 (27%), Positives = 253/535 (47%), Gaps = 8/535 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + E K++ +F M + + + + + KAC L + +HG +V
Sbjct: 149 WNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVV 208
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F D+ + ++ MYAKC RLD + +F ++P+++ SW+AMI G Q + L
Sbjct: 209 KFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLE 268
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ VG+ L ++ L L K +HS + +D+ V + YA
Sbjct: 269 LFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYA 328
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A+ V + + ++ S+N+II G D+ +L ++ ++ G D T+
Sbjct: 329 KCGRMADAQKVLSSMPKC--SLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITL 386
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
L++C ++GR VH + ++ V N ++ MY KC + A LFD M
Sbjct: 387 SGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMER 446
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ Q G+ +E L F +M + PD T S++ C AL G
Sbjct: 447 RDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEI 506
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G+ + V AL+DMY KCG I A ++ +KT+VSW +I+G +L +
Sbjct: 507 HTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQS 566
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+A F +M+E+ + P+ T+ AVL C + + G + K ++ ++ S
Sbjct: 567 EDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIK-QELQSDVYICST 625
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ D+ + G ++++ + P + D W +LC H +GE A +LFE
Sbjct: 626 LVDMYSKCGNMQDSQLMFEKAPNR-DFVTWNAMLCGYAHHG---LGEE-ALKLFE 675
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 230/478 (48%), Gaps = 9/478 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ +N+ I + +AL F+ + K + + +T ACA + L + +H
Sbjct: 347 SLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVH 406
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G VKS S+I V ++DMY KC L A LFD M RD SWNA+I Q G E
Sbjct: 407 GLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEE 466
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F +M ++ D T + +A + L+ +H+ I G+ D V +
Sbjct: 467 ETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALV 526
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC ++ A+ + E+ +T+VSWN+II G + + +D+ F+ M+ G PD
Sbjct: 527 DMYCKCGMIEKADKIHDRTEQ--KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPD 584
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L +C + G+ +H+ I DV + +TL+ MYSKCG++ ++ +F+
Sbjct: 585 NFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFE 644
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+R V+W AM+ GYA G +EAL+LF +M+ P+ T +S++ C G ++
Sbjct: 645 KAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDK 704
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G +FD GL + ++D+ + G I +A L +P E V W +++ C
Sbjct: 705 GLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVC 764
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
++G A +++LD + + L + AG WG + M K+ + N
Sbjct: 765 KIHGNVEVAEKATRALLQLDPQDSSACVL-LSNIYADAGM----WGNVSEMRKMMRHN 817
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 211/472 (44%), Gaps = 37/472 (7%)
Query: 42 FRRMKKNDIEPNN--LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
F + +N +P TF I + C+K + + H ++ F FV ++ MY
Sbjct: 35 FSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMY 94
Query: 100 AKCDRLDCAYKLFDKM-------------------------------PDRDVASWNAMIV 128
KC LD A K+FDKM P+RDV SWN++I
Sbjct: 95 IKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVIS 154
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF Q G K + +F M G+ D ++ + +A + + VH + G D
Sbjct: 155 GFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDC 214
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV + + YAKC L + VF + E + VSW+++I GC D+ + L ++
Sbjct: 215 DVVTGSALLGMYAKCKRLDDSLSVFSELPE--KNWVSWSAMIAGCVQNDRNVEGLELFKE 272
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G + SL SC AL G+ +HSH + F D+ V + MY+KCG
Sbjct: 273 MQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGR 332
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ A+ + M + S+ A+I GYA+ +AL+ F + G D +T+ ++
Sbjct: 333 MADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNA 392
Query: 369 CGQ-SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C G LE G+ A N+ V NA++DMY KC ++ +A +LF + + VS
Sbjct: 393 CASIRGDLE-GRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVS 451
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
W +IA C NG E L F M+ + P+ T+ +VL+AC L G
Sbjct: 452 WNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTG 503
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 171/357 (47%), Gaps = 4/357 (1%)
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV N+ IS YA C ++ +A F + E R VVSWNS+I G + S++ +
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPE--RDVVSWNSVISGFLQNGECRKSIDVFLE 171
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G D ++ +L +C E G VH + +GFD DV + L+ MY+KC
Sbjct: 172 MGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKR 231
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+D + +F + ++ VSW+AMI+G Q E L LF M+ G S+
Sbjct: 232 LDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRS 291
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C AL LGK ++A +++V A +DMY+KCG + DA+++ ++P+ ++ S+
Sbjct: 292 CAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSY 351
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+I G A + +AL F +++ L + +T L AC +G L K
Sbjct: 352 NAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVK 411
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ + + + D+ G+ L EA D M + DA W ++ AC+ + N E
Sbjct: 412 SISMS-NICVANAILDMYGKCKALAEASDLFDMME-RRDAVSWNAIIAACEQNGNEE 466
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 314/577 (54%), Gaps = 13/577 (2%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMI------------HGHIVKSPFWSDIFVQTTMVDM 98
E + L PF+ SD Y+ +I H ++ F+ T ++
Sbjct: 3 EASCLASPFLYTNSGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHA 62
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
+ + A ++FD +P V WNA+I G+++ + L ++ M+L + D T
Sbjct: 63 SSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTF 122
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
L +A HL + + VH+ +G +ADV V N I+ YAKC L A VF G+
Sbjct: 123 PHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPL 182
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
RT+VSW +I+ + ++L + M +PD +VS+L++ C + L QGR
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGR 242
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H+ + G + + ++ +L +MY+KCG + +A+ LFD M + W AMISGYA+ G
Sbjct: 243 SIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+A+ LF M PD +++ S IS C Q G+LE +W D Y +D+V + +
Sbjct: 303 FAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISS 362
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
ALIDM++KCGS+ AR +F ++ VV W+ MI G L+G+ EA+ L+ M + P
Sbjct: 363 ALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHP 422
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N VTFL +L AC H+G + +GW +FN M +++NP+ HY+C+ DLLGR G L +A +
Sbjct: 423 NDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEV 481
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
++ MP++ +WG LL ACK HR++E+G+Y A +LF ++P + YV+++N+YA W
Sbjct: 482 IKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLW 541
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
D VA +R MK + K G S V + G+ F V D
Sbjct: 542 DRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGD 578
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 216/417 (51%), Gaps = 5/417 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR N ALL++ +M+ + P++ TFP + KAC LS + +H +
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVF 146
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD--KMPDRDVASWNAMIVGFAQMGFLEKV 139
+ F +D+FVQ ++ +YAKC RL CA +F+ +P+R + SW A++ +AQ G +
Sbjct: 147 RLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEA 206
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L +F MR + ++ D V ++ + A + L +S+H+ + +G++ + + + +
Sbjct: 207 LEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTM 266
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC + A+++F ++ ++ WN++I G D+++ + MI RPD
Sbjct: 267 YAKCGQVATAKILFDKMKSP--NLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTI 324
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
++ S +S+C +L Q R + + + DV + + LI M++KCG ++ AR +FD
Sbjct: 325 SITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRT 384
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
DR V W+AMI GY G EA+ L+ AME G P+ VT L ++ C SG + G
Sbjct: 385 LDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGW 444
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
WF N + +ID+ + G + A E+ +P + V W +++ C
Sbjct: 445 WFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 147/318 (46%), Gaps = 5/318 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI W + + E +AL +F +M+K D++P+ + + A L D + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++K ++ + ++ MYAKC ++ A LFDKM ++ WNAMI G+A+ GF +
Sbjct: 246 ASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF+ M ++ D +++ A L + + + DV + + I
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALI 365
Query: 198 SAYAKCNDLKMAELVF-RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+AKC ++ A VF R ++ R VV W+++I G + ++++ YR M DG P
Sbjct: 366 DMFAKCGSVECARSVFDRTLD---RDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHP 422
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T + LL +C + +G + + + +I + + G +D A +
Sbjct: 423 NDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVI 482
Query: 317 DGMCDRTRVS-WTAMISG 333
M + V+ W A++S
Sbjct: 483 KCMPVQPGVTVWGALLSA 500
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S + WN+ I A A+ LF M D+ P+ ++ ACA++ ++
Sbjct: 284 KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ ++ +S + D+F+ + ++DM+AKC ++CA +FD+ DRDV W+AMIVG+ G
Sbjct: 344 WMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + L+ M G+ + VT +GL A H+
Sbjct: 404 QAREAISLYRAMERDGVHPNDVTFLGLLIACNHS 437
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/598 (33%), Positives = 325/598 (54%), Gaps = 3/598 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN + E ++LLLF +M + I P+ + K LS + H
Sbjct: 374 NVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAH 433
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G++VK F + V ++ YAK + +D A +FD+MP +D SWN++I G G
Sbjct: 434 GYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNS 493
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF M + G + D T++ + A + + + + VH + + G+ + S+ N +
Sbjct: 494 EAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALL 553
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+ C+D +FR + + + VVSW ++I T FD + M+ DG +PD
Sbjct: 554 DMYSNCSDWHSTNQIFRNMAQ--KNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPD 611
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
V V S+L E+L QG+ VH + I G + + V N L+ MY C +++ AR +FD
Sbjct: 612 VFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFD 671
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ ++ +SW +I GY++ +E+ LF M + P+ VT+ ++ +LE
Sbjct: 672 HVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFK-PNTVTMTCILPAVASISSLER 730
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ YA G ++ NAL+DMY KCG++ AR LF L +K ++SWT MIAG +
Sbjct: 731 GREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGM 790
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G +A+ LF QM + P+ +F A+L AC H+G +GW +FN M K Y++ P+L
Sbjct: 791 HGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLK 850
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ DLL G LKEA +F++SMPI+ D+ IW +LL C+IHR++++ E VA R+F+L
Sbjct: 851 HYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKL 910
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP + YV +ANIYA RW+ V L+ + +++ G S + + GK F ++
Sbjct: 911 EPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADN 968
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 217/488 (44%), Gaps = 16/488 (3%)
Query: 1 MAASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFI 60
M +PPR+ + + W S + + + + LFR+M+ + P+ +
Sbjct: 151 MVFDEMPPRV------ADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCV 204
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
K A L ++IHG + K V ++ +Y++C ++ A ++FD M RD
Sbjct: 205 LKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDA 264
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SWN+ I G+ G+ ++ + LF M G + VTV+ + A + K VH +
Sbjct: 265 ISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGY 324
Query: 181 GIHIGVDADVSVCNTWISA---------YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ G+ D+ + I Y KC D+ A VF + V WN I+G
Sbjct: 325 SMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHV-WNLIMG 383
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G +F++SL + M G PD + LL C G + H + + GF
Sbjct: 384 GYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGT 443
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V N LIS Y+K ID+A +FD M + +SW ++ISG G EA+ LF M
Sbjct: 444 QCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMW 503
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G D T+LS++ C +S +G+ Y+ GL + NAL+DMYS C
Sbjct: 504 MQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWH 563
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
++F + +K VVSWT MI G F + L +M+ ++P+ +VL
Sbjct: 564 STNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFA 623
Query: 472 HAGFLEKG 479
L++G
Sbjct: 624 GDESLKQG 631
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 191/398 (47%), Gaps = 24/398 (6%)
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+V Y KC L A +FD+MP R DV W +++ +A+ G ++ + LF M+ G+
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D V + + ++ + +H +G+ +V N I+ Y++C ++ A V
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + R +SWNS I G D +++ + M +G TV+S+L +C
Sbjct: 256 FDSMHA--RDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG 313
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINT---------LISMYSKCGDIDSARFLFDGMCDRT 323
+ G++VH + + G D+ + + L+ MY KCGD+ SAR +FD M +
Sbjct: 314 FELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKG 373
Query: 324 RVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPD---LVTVLSMIS--GCGQSGALEL 377
V W ++ GYA+ + +E+L LF M G PD L +L I+ C + G +
Sbjct: 374 NVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAH 433
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G Y G VCNALI Y+K I +A +F +P + +SW ++I+GC
Sbjct: 434 G-----YLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTS 488
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
NG EA++LF +M + T L+VL AC + +
Sbjct: 489 NGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHY 526
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 141/297 (47%), Gaps = 15/297 (5%)
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
AY KC DL A +VF + + V W S++ F + ++ +R M G PD
Sbjct: 139 AYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDA 198
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
V +L ++ +G ++H G +V N LI++YS+CG ++ A +FD
Sbjct: 199 HAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDS 258
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R +SW + ISGY G D A+ LF M + G VTVLS++ C + G +G
Sbjct: 259 MHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVG 318
Query: 379 KWFDNYACSGGLKDNVMVCNALID---------MYSKCGSIGDARELFYALPEK-TVVSW 428
K Y+ GL ++ + ID MY KCG +G AR +F A+P K V W
Sbjct: 319 KVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVW 378
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ-----ACTHAGFLEKGW 480
++ G A EF E+L LF QM EL + P+ +L+ +C G + G+
Sbjct: 379 NLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGY 435
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 12/248 (4%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDR---TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
L+ Y KCGD+ AR +FD M R RV WT+++S YA+ GD E + LF M+ G
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRV-WTSLMSAYAKAGDFQEGVSLFRQMQCCGV 194
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
PD V ++ G++ G+ GL + V NALI +YS+CG + DA +
Sbjct: 195 SPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQ 254
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F ++ + +SW + I+G NG A+DLF +M + VT L+VL AC GF
Sbjct: 255 VFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK--------GKLKEALDFVQSMPIKSD 527
G K + + S + + LG K G + A +MP K +
Sbjct: 315 ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374
Query: 528 AGIWGTLL 535
+W ++
Sbjct: 375 VHVWNLIM 382
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY--ACSG 388
I Q GDL ALRL + G + + +++ CG+ +LE + A +G
Sbjct: 70 IQRLCQAGDLAAALRLLGSDGGVG----VRSYCAVVQLCGEERSLEAARRAHALVRAGTG 125
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT--VVSWTTMIAGCALNGEFVEALD 446
G+ +V+ L+ Y KCG +G AR +F +P + V WT++++ A G+F E +
Sbjct: 126 GIIGSVL-GKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVS 184
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
LF QM + P+ VL+ G + +G L+ K+ + + + L
Sbjct: 185 LFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKL-GLGEACAVANALIALY 243
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
R G +++A+ SM + DA W + +
Sbjct: 244 SRCGCMEDAMQVFDSMHAR-DAISWNSTI 271
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 323/594 (54%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V + + AL F+ M+ + ++PN+++F + CA +HG ++
Sbjct: 246 WNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI 305
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S F SD V T++ MY+KC L A K+FD MP D +WN +I G+ Q GF ++ +
Sbjct: 306 RSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVA 365
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G++ D +T + + + L K VHS+ + GV DV + + + Y
Sbjct: 366 LFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYF 425
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K D++MA F+ + L V ++I G ++LN +R +I +G P+ T+
Sbjct: 426 KGGDVEMACKTFQ--QNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTM 483
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +L G+ +H + G + V +++ MY+K G +D A F M
Sbjct: 484 ASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV 543
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W MI ++Q G + A+ LF M +G D V++ + +S C AL GK
Sbjct: 544 KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL 603
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ + V + LIDMYSKCG + AR +F + K VSW ++IA +G
Sbjct: 604 HCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRP 663
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E LDLFH+M+E ++P+ VTFL ++ AC HAG +++G YF MT+ Y + + H++C
Sbjct: 664 RECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFAC 723
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL GR G+L EA D ++SMP DAG WG+LL AC++H N+E+ + + L EL+P++
Sbjct: 724 MVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNN 783
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++N++A G W+ V +R++MK V+K PG S + +NG T F+ D
Sbjct: 784 SGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAAD 837
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 239/504 (47%), Gaps = 4/504 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL+ F RM +++ P+ TFP++ KAC L++ +M+H F D+F+ ++++
Sbjct: 161 ALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIK 220
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+Y + A LFD++P RD WN M+ G+ + G L F MR ++ + V+
Sbjct: 221 LYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVS 280
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ L + +H I G ++D +V NT I+ Y+KC +L A +F +
Sbjct: 281 FVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMP 340
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ V+WN +I G D+++ ++ M+ G + D T S L S + +L
Sbjct: 341 Q--TDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYC 398
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+ VHS+ + +G DV + + L+ +Y K GD++ A F TAMISGY
Sbjct: 399 KEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLN 458
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G EAL LF + G VP+ +T+ S++ C +L+LGK GL++ V
Sbjct: 459 GLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVG 518
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+++ MY+K G + A + F +P K V W MI + NG+ A+DLF QM +
Sbjct: 519 SSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTK 578
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
+ V+ A L AC + L G + + ++ S + D+ + GKL A
Sbjct: 579 FDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVA-STLIDMYSKCGKLALARS 637
Query: 518 FVQSMPIKSDAGIWGTLLCACKIH 541
M K++ W +++ A H
Sbjct: 638 VFDMMDWKNEVS-WNSIIAAYGNH 660
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 222/475 (46%), Gaps = 26/475 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH ++ + + + M+ MY C LF ++ WN +I GF+ +
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G + L F+ M + D T + +A ++ L K VH +G D+ +
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ I Y + A+ +F E +R + WN ++ G F+ +L ++ M
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFD--ELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSC 273
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+P+ + V LLS C + G +H I GF+ D +V NT+I+MYSKCG++ AR
Sbjct: 274 VKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDAR 333
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD M V+W +I+GY Q G DEA+ LF AM +G D +T S + +SG
Sbjct: 334 KIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSG 393
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+L+ K +Y G+ +V + +AL+D+Y K G + A + F V T MI+
Sbjct: 394 SLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMIS 453
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEKGWGY 482
G LNG VEAL+LF +++ + PN +T +VL AC H L+KG
Sbjct: 454 GYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKG--- 510
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ V QV + + + + G+L A F + MP+K D+ W ++ +
Sbjct: 511 ---LENVCQVGSSITY------MYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVS 555
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/666 (33%), Positives = 353/666 (53%), Gaps = 57/666 (8%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
A SL RL I ST+ WN+ IR +V L + +M++ P++ TFPF+ K
Sbjct: 78 AVSLLQRL--IPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLK 135
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---D 119
AC ++ + +H + + S++F+ ++V MY +C LD A+++FD++ +R D
Sbjct: 136 ACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIED 195
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNM---RLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+ SWN+++ + Q G L + + M + ++ D +T++ + A L K
Sbjct: 196 IVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQ 255
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH F + G+ DV V N +S YAKC+ + A VF GI++ + VVSWN+++ G +
Sbjct: 256 VHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKK--KDVVSWNAMVTGYSQI 313
Query: 237 DKFD-----------------------------------DSLNFYRHMIYDGFRPDVTTV 261
FD ++L+ +R M G P+V T+
Sbjct: 314 GSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 373
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDL-------DVSVINTLISMYSKCGDIDSARF 314
SLLS C AL+ G+ H++ I +L D+ V+N LI MY+KC AR
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433
Query: 315 LFDGM--CDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCG 370
+FD + D+ V+WT MI GYAQ G+ ++AL+LF + + P+ T+ + C
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493
Query: 371 QSGALELGKWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ G L LG+ YA + V+ V N LIDMYSK G I AR +F + + VVSWT
Sbjct: 494 RLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWT 553
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+++ G ++G EAL LF QM +L + +TFL VL AC+H+G +++G YF+ M K
Sbjct: 554 SLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKG 613
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P HY+CM DLLGR G+L EA++ +++M ++ A +W LL A +IH NIE+GEY
Sbjct: 614 FGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEY 673
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A +L EL + Y ++N+YA RW VA +R++MK ++K PG S + T
Sbjct: 674 AASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTT 733
Query: 610 TFTVED 615
TF V D
Sbjct: 734 TFFVGD 739
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 247/540 (45%), Gaps = 61/540 (11%)
Query: 56 TFPFIA--KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD 113
T P I+ + C L + +++ H I F +++F + V Y +C A L
Sbjct: 30 TIPLISLLRQCKTL---INAKLAHQQIFVHGF-TEMF--SYAVGAYIECGASAEAVSLLQ 83
Query: 114 KM-PDRD-VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
++ P V WNA+I ++G L+ L + M+ +G D T + +A L
Sbjct: 84 RLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSL 143
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI-EEGLRTVVSWNSII 230
SVH+ G+ ++V +CN+ ++ Y +C L A +F + E + +VSWNSI+
Sbjct: 144 RHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSIL 203
Query: 231 GGCTYGDKFDDSLNFYRHMIYD---GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
G + +L M RPD T+V++L +C AL G+ VH +
Sbjct: 204 AAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRN 263
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD------ 341
G DV V N L+SMY+KC ++ A +F+G+ + VSW AM++GY+Q G D
Sbjct: 264 GLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLF 323
Query: 342 -----------------------------EALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
EAL +F M+ G P++VT+ S++SGC
Sbjct: 324 KMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASV 383
Query: 373 GALELGKWFDNYACSGGL-------KDNVMVCNALIDMYSKCGSIGDARELFYAL--PEK 423
GAL GK Y L +D+++V N LIDMY+KC S AR +F ++ +K
Sbjct: 384 GALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDK 443
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMM--ELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
VV+WT MI G A +GE +AL LF Q+ + L+PN T L AC G L G
Sbjct: 444 NVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQ 503
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + L +C+ D+ + G + A +M +++ W +L+ +H
Sbjct: 504 LHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVS-WTSLMTGYGMH 562
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/654 (33%), Positives = 337/654 (51%), Gaps = 62/654 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IRE + + A+ + RM + P++ T P + KAC +L + HG I
Sbjct: 130 WNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLIC 189
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVASWNAMIVGFAQMGFLEK 138
+ F S++F+ +V MY++C L+ A +FD++ R DV SWN+++ +
Sbjct: 190 CNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT 249
Query: 139 VLCLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L LF M L+ ++D ++++ + A K + K VH I G DV V
Sbjct: 250 ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFV 309
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD------------ 240
N I AYAKC ++ A VF +E + VVSWN+++ G + F+
Sbjct: 310 GNALIDAYAKCGLMENAVKVFNMME--FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKE 367
Query: 241 -----------------------DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
++LN +R MI+ G P+ T++S+LS+C A QG
Sbjct: 368 NIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 427
Query: 278 RLVHSHGIHY----------GFDLDVSVINTLISMYSKCGDIDSARFLFDGMC--DRTRV 325
+H++ + G D D+ V N LI MYSKC +AR +FD + +R V
Sbjct: 428 TEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 487
Query: 326 SWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+WT MI G+AQ GD ++AL+LF M E G P+ T+ ++ C A+ +GK
Sbjct: 488 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 547
Query: 384 YACSGGLKDN--VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y ++ V N LIDMYSKCG + AR +F ++ +K+ +SWT+M+ G ++G
Sbjct: 548 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 607
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EALD+F +M + P+ +TFL VL AC+H G +++G YF+ M+ Y + P HY+C
Sbjct: 608 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 667
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
DLL R G+L +A V+ MP++ A +W LL AC++H N+E+ E+ +L E+ +
Sbjct: 668 AIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 727
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y ++NIYA GRW VA +R +MK++ +KK PG S V T +F V D
Sbjct: 728 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGD 781
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 236/517 (45%), Gaps = 62/517 (11%)
Query: 84 PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF 143
PF S + T +V Y C D A + +++ WN +I + G L+ + +
Sbjct: 91 PFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 150
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
M G + D T+ + +A + H G +++V +CN ++ Y++C
Sbjct: 151 CRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 210
Query: 204 NDLKMAELVFRGI-EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY------DGFRP 256
L+ A ++F I + G+ V+SWNSI+ +L+ + M R
Sbjct: 211 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 270
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D+ ++V++L +C +A+ Q + VH + I G DV V N LI Y+KCG +++A +F
Sbjct: 271 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 330
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLD----------------------------------- 341
+ M + VSW AM++GY+Q G+ +
Sbjct: 331 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS----------GGLK 391
EAL LF M +G +P+ VT++S++S C GA G Y+ GG
Sbjct: 391 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 450
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALNGEFVEALDLFH 449
+++MV NALIDMYSKC S AR +F +P E+ VV+WT MI G A G+ +AL LF
Sbjct: 451 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 510
Query: 450 QMME--LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY---SCMAD 504
+M+ + PN T +L AC H + G + + ++ E + Y +C+ D
Sbjct: 511 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY--ESSAYFVANCLID 568
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + G + A SM KS A W +++ +H
Sbjct: 569 MYSKCGDVDTARHVFDSMSQKS-AISWTSMMTGYGMH 604
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/658 (33%), Positives = 336/658 (51%), Gaps = 56/658 (8%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
PP +Y WNS IR + A+K L F M P+N TFPF+ KAC
Sbjct: 85 FPPSDAGVY------HWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACG 138
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
++S H + F S++FV +V MY++C L A K+FD+MP DV SWN+
Sbjct: 139 EISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNS 198
Query: 126 MIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
+I +A++G + L +F M G + D +T++ + SL K H F +
Sbjct: 199 IIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTS 258
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
+ ++ V N + YAK + A VF + ++ VVSWN+++ G + +F+D++
Sbjct: 259 EMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMP--VKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 245 FY-----------------------------------RHMIYDGFRPDVTTVVSLLSSCV 269
+ R M+ G +P+ T++S+LS C
Sbjct: 317 LFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 270 CPEALVQGRLVHSHGIHYGFDL-------DVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
AL+ G+ +H + I Y DL + VIN LI MY+KC +D AR +FD + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPK 436
Query: 323 TR--VSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG 378
R V+WT MI GY+Q GD ++AL L M E P+ T+ + C AL +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIG 496
Query: 379 KWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
K YA + V N LIDMY+KCG IGDAR +F + EK V+WT+++ G +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGM 556
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL +F +M + + + VT L VL AC+H+G +++G YFN M + V+P
Sbjct: 557 HGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPE 616
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ DLLGR G+L AL ++ MP++ +W LL C+IH +E+GEY A ++ EL
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITEL 676
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y ++N+YA GRW V +R++M+ +KK PG S V T TF V D
Sbjct: 677 ASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGD 734
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 163/329 (49%), Gaps = 8/329 (2%)
Query: 156 VTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+ + +T IH K +S +K +H + G+ +++ + IS Y L A + R
Sbjct: 25 TSALEITPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLR 83
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
V WNS+I + + L+ + M + PD T + +C ++
Sbjct: 84 RFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSV 143
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G H+ GF +V V N L++MYS+CG + AR +FD M VSW ++I Y
Sbjct: 144 RCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESY 203
Query: 335 AQKGDLDEALRLFFAMEAA-GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
A+ G AL +F M G PD +T+++++ C G LGK F +A + + N
Sbjct: 204 AKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQN 263
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ V N L+DMY+K G + +A +F +P K VVSW M+AG + G F +A+ LF QM E
Sbjct: 264 MFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQE 323
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
++ + VT+ A + +G+ ++G GY
Sbjct: 324 EKIKMDVVTWSAAI-----SGYAQRGLGY 347
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/654 (33%), Positives = 337/654 (51%), Gaps = 62/654 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IRE + + A+ + RM + P++ T P + KAC +L + HG I
Sbjct: 123 WNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLIC 182
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVASWNAMIVGFAQMGFLEK 138
+ F S++F+ +V MY++C L+ A +FD++ R DV SWN+++ +
Sbjct: 183 CNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT 242
Query: 139 VLCLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L LF M L+ ++D ++++ + A K + K VH I G DV V
Sbjct: 243 ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFV 302
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD------------ 240
N I AYAKC ++ A VF +E + VVSWN+++ G + F+
Sbjct: 303 GNALIDAYAKCGLMENAVKVFNMME--FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKE 360
Query: 241 -----------------------DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
++LN +R MI+ G P+ T++S+LS+C A QG
Sbjct: 361 NIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 420
Query: 278 RLVHSHGIHY----------GFDLDVSVINTLISMYSKCGDIDSARFLFDGMC--DRTRV 325
+H++ + G D D+ V N LI MYSKC +AR +FD + +R V
Sbjct: 421 TEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 480
Query: 326 SWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+WT MI G+AQ GD ++AL+LF M E G P+ T+ ++ C A+ +GK
Sbjct: 481 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 540
Query: 384 YACSGGLKDN--VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y ++ V N LIDMYSKCG + AR +F ++ +K+ +SWT+M+ G ++G
Sbjct: 541 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 600
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EALD+F +M + P+ +TFL VL AC+H G +++G YF+ M+ Y + P HY+C
Sbjct: 601 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 660
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
DLL R G+L +A V+ MP++ A +W LL AC++H N+E+ E+ +L E+ +
Sbjct: 661 AIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 720
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y ++NIYA GRW VA +R +MK++ +KK PG S V T +F V D
Sbjct: 721 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGD 774
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 236/517 (45%), Gaps = 62/517 (11%)
Query: 84 PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF 143
PF S + T +V Y C D A + +++ WN +I + G L+ + +
Sbjct: 84 PFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 143
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
M G + D T+ + +A + H G +++V +CN ++ Y++C
Sbjct: 144 CRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 203
Query: 204 NDLKMAELVFRGI-EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY------DGFRP 256
L+ A ++F I + G+ V+SWNSI+ +L+ + M R
Sbjct: 204 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 263
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D+ ++V++L +C +A+ Q + VH + I G DV V N LI Y+KCG +++A +F
Sbjct: 264 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 323
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLD----------------------------------- 341
+ M + VSW AM++GY+Q G+ +
Sbjct: 324 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS----------GGLK 391
EAL LF M +G +P+ VT++S++S C GA G Y+ GG
Sbjct: 384 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 443
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALNGEFVEALDLFH 449
+++MV NALIDMYSKC S AR +F +P E+ VV+WT MI G A G+ +AL LF
Sbjct: 444 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 503
Query: 450 QMME--LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY---SCMAD 504
+M+ + PN T +L AC H + G + + ++ E + Y +C+ D
Sbjct: 504 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY--ESSAYFVANCLID 561
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + G + A SM KS A W +++ +H
Sbjct: 562 MYSKCGDVDTARHVFDSMSQKS-AISWTSMMTGYGMH 597
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 315/575 (54%), Gaps = 3/575 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL F M P TF + K CA D + +H + S+ T + +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFV 156
MYAKC R A ++FD+MP RD +WNA++ G+A+ G + + M+ G + D +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + A +A+ L+ + H+F I G++ V+V + AY KC D++ A +VF +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ VSWN++I G ++L + M+ +G +V++ L +C L +
Sbjct: 223 PT--KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G VH + G D +VSV+N LI+MYSKC +D A +FD + RT+VSW AMI G AQ
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G ++A+RLF M+ PD T++S+I +W Y+ L +V V
Sbjct: 341 NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYV 400
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
ALIDMY+KCG + AR LF + E+ V++W MI G +G A++LF +M + +
Sbjct: 401 LTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGI 460
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
PN TFL+VL AC+HAG +++G YF M + Y + P + HY M DLLGR GKL EA
Sbjct: 461 VPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAW 520
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
F+Q MP+ ++G +L ACK+H+N+E+ E A ++FEL P +V +ANIYA
Sbjct: 521 AFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANAS 580
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
W VA +RT M++N ++K PG S++ + + TF
Sbjct: 581 MWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTF 615
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 3/292 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I ++ +AL LF RM + ++ +++ +AC +L +H +V
Sbjct: 230 WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLV 289
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ S++ V ++ MY+KC R+D A +FD++ R SWNAMI+G AQ G E +
Sbjct: 290 RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVR 349
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+L ++ D T++ + A + +H + I + +D DV V I YA
Sbjct: 350 LFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYA 409
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A ++F E R V++WN++I G ++ + M G P+ TT
Sbjct: 410 KCGRVNIARILFNSARE--RHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 262 VSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+S+LS+C + +GR S YG + + T++ + + G +D A
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/596 (34%), Positives = 329/596 (55%), Gaps = 6/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+S + + + +AL++F +++ E PN + +AC +L +HG +
Sbjct: 118 WSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFV 177
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+S F D++V T+++D Y+K ++ A +FD++ ++ +W +I G+ + G L
Sbjct: 178 VRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSL 237
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF MR + D V + A + L K +H++ + G + DVSV N I Y
Sbjct: 238 ELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFY 297
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRPDVT 259
KCN +K +F + ++ ++SW ++I G + FD +++ + M G++PD
Sbjct: 298 TKCNRVKAGRKLFDQMV--VKNIISWTTMISGYMQ-NSFDWEAMKLFGEMNRLGWKPDGF 354
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
S+L+SC EAL QGR VH++ I + D V N LI MY+K + A+ +FD M
Sbjct: 355 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 414
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ +S+ AMI GY+ + L EAL LF M + P+ T ++I+ +L G+
Sbjct: 415 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQ 474
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
F N GL V NAL+DMY+KCGSI +AR++F + + VV W +MI+ A +G
Sbjct: 475 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 534
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
E EAL +F +MM+ ++PN VTF+AVL AC+HAG +E G +FN M + + P HY
Sbjct: 535 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHY 593
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C+ LLGR GKL EA +F++ MPI+ A +W +LL AC+I N+E+G+Y A +P
Sbjct: 594 ACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDP 653
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y+ ++NI+A G W V +R M ++V K PG+S + +N K F D
Sbjct: 654 KDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARD 709
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 257/499 (51%), Gaps = 7/499 (1%)
Query: 49 DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
++ P F + + + ++ ++IHG I+ S SD F+ ++++ +K DR+D A
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIH 167
+FDKMP +++ +W++M+ ++Q G+ E+ L +F ++ R G + + + +A
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ +H F + G D DV V + I Y+K +++ A LVF + E +T V+W
Sbjct: 164 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE--KTAVTWT 221
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+II G T + SL + M PD V S+LS+C E L G+ +H++ +
Sbjct: 222 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 281
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G ++DVSV+N LI Y+KC + + R LFD M + +SWT MISGY Q EA++LF
Sbjct: 282 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD S+++ CG ALE G+ Y L+ + V N LIDMY+K
Sbjct: 342 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 401
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ DA+++F + E+ V+S+ MI G + + EAL+LFH+M +PN TF A++
Sbjct: 402 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALI 461
Query: 468 QACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
A ++ L G + N + K+ P + + + D+ + G ++EA S I
Sbjct: 462 TAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNS-SIWR 518
Query: 527 DAGIWGTLLCACKIHRNIE 545
D W +++ H E
Sbjct: 519 DVVCWNSMISTHAQHGEAE 537
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 166/376 (44%), Gaps = 36/376 (9%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I W + I + + +A+ LF M + +P+ + +C + +H
Sbjct: 317 NIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVH 376
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ +K+ SD FV+ ++DMYAK + L A K+FD M +++V S+NAMI G++ L
Sbjct: 377 AYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLS 436
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF+ MR+ + + T L AA + L + H+ + +G+D V N +
Sbjct: 437 EALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALV 496
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC ++ A +F R VV WNS+I + +++L +R M+ +G +P+
Sbjct: 497 DMYAKCGSIEEARKMFNS--SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 554
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T V++LS+C H+ + G + N++ K G
Sbjct: 555 YVTFVAVLSAC-----------SHAGRVEDGLNH----FNSMPGFGIKPGT--------- 590
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ ++S + G L EA M P + S++S C +G +EL
Sbjct: 591 -------EHYACVVSLLGRSGKLFEAKEFIEKMPIE---PAAIVWRSLLSACRIAGNVEL 640
Query: 378 GKWFDNYACSGGLKDN 393
GK+ A S KD+
Sbjct: 641 GKYAAEMAISTDPKDS 656
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 319/586 (54%), Gaps = 19/586 (3%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M ++ + PNN TFPF KAC+ L+D + IH H + + +D+FV T ++DMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC--LFYNMRLVGIQADFVTVMGLT 162
L A +F MP RD+ +WNAM+ G+A G + L M++ ++ + T++ L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDAD----------VSVCNTWISAYAKCNDLKMAELV 212
L+ SVH++ I + + V + + YAKC L A V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF---RPDVTTVVSLLSSCV 269
F + R V+W+++IGG + + ++ M+ G P T++ S L +C
Sbjct: 181 FDAMPA--RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIASALRACA 236
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
+ L G +H+ G D++ N+L+SMY+K G ID A LFD M + VS++A
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
++SGY Q G +EA +F M+A PD T++S+I C AL+ G+ G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L +CNALIDMY+KCG I +R++F +P + +VSW TMIAG ++G EA LF
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M L P+ VTF+ +L AC+H+G + +G +F++M Y + P + HY CM DLL R
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L EA +F+QSMP+++D +W LL AC++++NI++G+ V+ + EL P +V ++
Sbjct: 477 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 536
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIY+ GR+D A +R + K KK PG S + ING F D
Sbjct: 537 NIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD 582
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+++ + V A +A L+F++M+ ++EP+ T + AC+ L+ + + HG ++
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 353
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S+ + ++DMYAKC R+D + ++F+ MP RD+ SWN MI G+ G ++
Sbjct: 354 IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATA 413
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
LF M +G D VT + L A H+
Sbjct: 414 LFLEMNNLGFPPDGVTFICLLSACSHS 440
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 320/595 (53%), Gaps = 2/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + V + A+ +F M ++PN F + AC D + +H +
Sbjct: 169 SWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMV 228
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+++ + D+F +VDMY+K + A +F K+P+ DV SWNA I G G + L
Sbjct: 229 IRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHAL 288
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M+ G+ + T+ + +A + +L + +H F + D+D + + Y
Sbjct: 289 ELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMY 348
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK L A+ VF I + R +V WN++I GC++G + ++L+ + M +GF + TT
Sbjct: 349 AKHGLLDDAKKVFDWIPQ--RDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTT 406
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ ++L S EA+ R VH+ GF D V+N LI Y KC ++ A +F+
Sbjct: 407 LAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG 466
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+++T+MI+ +Q ++A++LF M G PD + S+++ C A E GK
Sbjct: 467 SYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ +V NAL+ Y+KCGSI DA F LPEK VVSW+ MI G A +G
Sbjct: 527 VHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGH 586
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
ALD+FH+M++ + PN +T +VL AC HAG +++ YFN M +++ + HY+
Sbjct: 587 GKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYA 646
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR GKL +A++ V SMP +++A +WG LL A ++HR+ E+G A +LF LEP
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPE 706
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +V +AN YA G WD VA +R +MK ++VKK P S V + K TF V D
Sbjct: 707 KSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGD 761
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 203/413 (49%), Gaps = 9/413 (2%)
Query: 58 PFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
P + + A S L IH H++KS ++ + ++ Y+KC A ++FD++PD
Sbjct: 9 PLLTRYAATQS-LLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPD 65
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
SW++++ ++ L F +MR ++ + + + + A A +
Sbjct: 66 PCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDA---GFGTQL 122
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYG 236
H+ + G+ D+ V N ++ Y + A +VF E G R VSWN ++
Sbjct: 123 HALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFD--EAGCERNTVSWNGLMSAYVKN 180
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D+ ++ + M++ G +P+ ++++C L GR VH+ I G+D DV
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N L+ MYSK GDI A +F + + VSW A ISG G AL L M+++G V
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P++ T+ S++ C SGA LG+ + + + L+DMY+K G + DA+++
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
F +P++ +V W +I+GC+ + EAL LF +M + NR T AVL++
Sbjct: 361 FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 162/348 (46%), Gaps = 12/348 (3%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N +S Y+KC A VF I + VSW+S++ + D+L +R M
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDEIPDPCH--VSWSSLVTAYSNNAMPRDALGAFRSMRSCS 98
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
R + V+ ++ C P+A G +H+ + G D+ V N L++MY G +D AR
Sbjct: 99 VRCN-EFVLPVVLKCA-PDAGF-GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEAR 155
Query: 314 FLFD-GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+FD C+R VSW ++S Y + A+++F M G P+ +++ C S
Sbjct: 156 MVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGS 215
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
LE G+ G +V NAL+DMYSK G I A +F +PE VVSW I
Sbjct: 216 RDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFI 275
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+GC L+G AL+L QM L PN T ++L+AC +G G M K
Sbjct: 276 SGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVK---A 332
Query: 493 NPELNHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
N + ++Y + D+ + G L +A +P + D +W L+ C
Sbjct: 333 NADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISGC 379
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 10 LNKIYR------SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
LN YR S I + S I + A+ LF M + ++P+ + A
Sbjct: 455 LNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNA 514
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
CA LS + + +H H++K F SD+F +V YAKC ++ A F +P++ V SW
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSW 574
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+AMI G AQ G ++ L +F+ M I + +T+ + A HA
Sbjct: 575 SAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHA 619
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/656 (32%), Positives = 345/656 (52%), Gaps = 64/656 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN +RE + + +A+ + RM + +P++ T P+ KAC +L + + +HG I
Sbjct: 117 WNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLIC 176
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVASWNAMIVGFAQMGFLEK 138
+ F S++FV +V MY++C L+ A +FD++ + DV SWN+++ +
Sbjct: 177 CNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRT 236
Query: 139 VLCLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L LF M ++ ++D ++++ + A K L +K +HS+ I G AD V
Sbjct: 237 ALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFV 296
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT----YGDKFD-------- 240
CN I YAKC + A VF +E + VVSWN+++ G T +G F+
Sbjct: 297 CNALIDTYAKCGSMNDAVKVFNVME--FKDVVSWNAMVTGYTQSGNFGAAFELFENMRKE 354
Query: 241 -----------------------DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
++L+ ++ MI DG P+ T++SLLS+C AL QG
Sbjct: 355 NIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQG 414
Query: 278 RLVHSHGIHYGF------------DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR- 324
+H++ + D+ V N LI MYSKC +AR +FD + R R
Sbjct: 415 MEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERN 474
Query: 325 -VSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V+WT MI GYAQ GD ++AL++F M + P+ T+ ++ C AL +GK
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQI 534
Query: 382 DNYACSGGLKDNVM--VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
Y + + V N LIDMYSKCG + AR +F ++P++ VSWT+M++G ++G
Sbjct: 535 HAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EALD+F +M + P+ ++FL +L AC+H+G +++G YF++M + Y V HY
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHY 654
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C+ DLL R G+L +A +Q MP++ A IW LL AC++H N+E+ EY +L ++
Sbjct: 655 ACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKA 714
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y ++NIYA RW VA +R +MK++ +KK PG S V T +F V D
Sbjct: 715 ENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGD 770
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 145/292 (49%), Gaps = 16/292 (5%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+++Y C K A V + V WN ++ D ++ M+ G +P
Sbjct: 90 VASYLACGATKDALSVLERVTPS--PAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKP 147
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T+ L +C + GR +H GF+ +V V N L++MYS+CG ++ A +F
Sbjct: 148 DHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVF 207
Query: 317 DGMCDR---TRVSWTAMISGYAQKGDLDEALRLFFAM------EAAGEVPDLVTVLSMIS 367
D + + +SW ++++ + + + AL LF M +A E D++++++++
Sbjct: 208 DEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILP 267
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C AL K +YA G + VCNALID Y+KCGS+ DA ++F + K VVS
Sbjct: 268 ACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVS 327
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
W M+ G +G F A +LF M + ++ + +T+ AV+ AG+ ++G
Sbjct: 328 WNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVI-----AGYAQRG 374
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
+++ Y CG A + + + V W ++ + ++G LD A+ + M AG PD
Sbjct: 89 VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
T+ + CG+ + G+ C G + NV VCNAL+ MYS+CGS+ DA +F
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFD 208
Query: 419 ALPEK---TVVSWTTMIAGCALNGEFVEALDLFHQMMEL------DLRPNRVTFLAVLQA 469
+ K V+SW +++A AL+LF +M + + R + ++ + +L A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPA 268
Query: 470 CT 471
C
Sbjct: 269 CA 270
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLY 72
R + W I +++ AL +F M K + PN T I ACA L+
Sbjct: 471 RERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRM 530
Query: 73 SQMIHGHIVKSPFW--SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ IH ++ + + S FV ++DMY+KC +D A +FD MP R+ SW +M+ G+
Sbjct: 531 GKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGY 590
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G ++ L +F M+ G D ++ + L A H+
Sbjct: 591 GMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/585 (36%), Positives = 318/585 (54%), Gaps = 9/585 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNN--LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
N+ H ++ F + + + N + F + K ++L D + + +H +I+KS +D F
Sbjct: 112 NDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSN-AADSF 170
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
V T++VD Y+KC +L A K+FD++PDR V SW +MIV + Q E+ L LF MR
Sbjct: 171 VLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGF 230
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ + TV L A L K VH + I G++ + + + ++ Y KC D+ A
Sbjct: 231 LDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDAR 290
Query: 211 LVFRGIE----EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLS 266
VF G +V W ++I G T +L + + P+ T+ SLLS
Sbjct: 291 SVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLS 350
Query: 267 SCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS 326
+C E +V G+L+H + YG D D S+ N+L+ MY+KCG I A ++F D+ VS
Sbjct: 351 ACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVS 409
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W ++ISGYAQ G EAL LF M +PD VTV+ ++S C GA ++G +A
Sbjct: 410 WNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFAL 469
Query: 387 SGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
GL ++ V AL++ Y+KCG AR +F + EK V+W MI GC + G+ V +L
Sbjct: 470 KYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSL 529
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
LF M++ +L PN V F +L AC+H+G +E+G F+ M K P + HY+CM DL
Sbjct: 530 ALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDL 589
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPY 565
L R G L+EALDF+ MP++ G++G L C +H N + GE R+ EL P A Y
Sbjct: 590 LARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYY 649
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
V ++N+YA GRW V +R M+K+ + K PG SLV ++ T
Sbjct: 650 VLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMDVNNTT 694
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/522 (27%), Positives = 246/522 (47%), Gaps = 46/522 (8%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W S I V A + L+LF RM++ ++ N T + AC KL + +H
Sbjct: 199 SVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVH 258
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP------DRDVASWNAMIVGFA 131
G+++K+ + ++ T++++MY KC + A +FD+ D+ W AMIVG+
Sbjct: 259 GYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYT 318
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q G+ + L LF + + I + VT+ L A +++ + K +H + G+D D S
Sbjct: 319 QRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTS 377
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N+ + YAKC + A VF + + VVSWNS+I G ++L+ + M
Sbjct: 378 LRNSLVDMYAKCGLIPDAHYVFATTVD--KDVVSWNSVISGYAQSGSAYEALDLFNRMRM 435
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDID 310
+ F PD TVV +LS+C A G +H + YG + V L++ Y+KCGD
Sbjct: 436 ESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDAT 495
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SAR +FDGM ++ V+W AMI G +GD +L LF M VP+ V ++++ C
Sbjct: 496 SARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACS 555
Query: 371 QSGALELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSW 428
SG +E G ++ C ++ ++D+ ++ G++ +A + +P + V +
Sbjct: 556 HSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVF 615
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ GC L+ F +M+E L P+ QAC Y+ L++
Sbjct: 616 GAFLHGCGLHSNFDFGEVAIRRMLE--LHPD--------QAC-----------YYVLISN 654
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+Y + GR G +KE + ++ + G+
Sbjct: 655 LYASD-------------GRWGMVKEVREMIKQRGLNKVPGV 683
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 224/469 (47%), Gaps = 15/469 (3%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM--RLVG 150
TT++ +YA L A LF ++P S+ +I+ + + + + FYN+ +G
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFK-LIIRWHFLNDVHSHVVSFYNLARTTLG 130
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
D V L + A + + L +H I AD V + + AY+KC L+ A
Sbjct: 131 SFNDLVVFSILLKTASQLRDIVLTTKLHC-NILKSNAADSFVLTSLVDAYSKCGKLRDAR 189
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
VF I + R+VVSW S+I + ++ L + M +V TV SL+++C
Sbjct: 190 KVFDEIPD--RSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTK 247
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT------R 324
L QG+ VH + I G +++ + +L++MY KCGDI AR +FD T
Sbjct: 248 LGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDL 307
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
V WTAMI GY Q+G AL LF + +P+ VT+ S++S C Q + +GK
Sbjct: 308 VFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVL 367
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
GL D+ + N+L+DMY+KCG I DA +F +K VVSW ++I+G A +G EA
Sbjct: 368 VVKYGL-DDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEA 426
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
LDLF++M P+ VT + VL AC G + G K V+ + + + +
Sbjct: 427 LDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLN 486
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
+ G A M K +A W ++ C + + +G +R
Sbjct: 487 FYAKCGDATSARMVFDGMGEK-NAVTWAAMIGGCGMQGD-GVGSLALFR 533
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 321/591 (54%), Gaps = 4/591 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I ++AL ++ R + + P++ T + +AC L +IHG I
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLI 242
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K D+ V ++ MY K + L ++FDKM RD SWN MI G++Q+G E+ +
Sbjct: 243 EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESI 302
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M + + D +T+ + QA H L K VH + I G + D + N I+ Y
Sbjct: 303 KLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMY 361
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC +L ++ VF G++ + VSWNS+I FD+++ ++ M D +PD T
Sbjct: 362 AKCGNLLASQEVFSGMK--CKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVT 418
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V LLS L G+ +H GF+ ++ V NTL+ MY+KCG++ + +F+ M
Sbjct: 419 YVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK 478
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R ++W +I+ D + LR+ M G PD+ T+LS++ C A GK
Sbjct: 479 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 538
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
GL+ +V V N LI+MYSKCGS+ ++ ++F + K VV+WT +I+ C + GE
Sbjct: 539 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 598
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+A+ F +M + P+ V F+A++ AC+H+G +E+G YF+ M K Y++ P + HY+
Sbjct: 599 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYA 658
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R L +A DF+ SMP+K D+ IWG LL AC++ + EI E V+ R+ EL P
Sbjct: 659 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPD 718
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
YV ++NIYA G+WD V ++R +K +KK PG S + I K F
Sbjct: 719 DTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVF 769
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/549 (29%), Positives = 286/549 (52%), Gaps = 9/549 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S+ + WNS IR +AL L+ ++ ++P+ TFP + ACA L DF ++
Sbjct: 77 SNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 136
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++ F SD+++ ++DMY + + LD A K+F++MP RDV SWN++I G+ G+
Sbjct: 137 IHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 196
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L ++Y R +G+ D T+ + +A + +H IG+ DV V N
Sbjct: 197 WNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 256
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+S Y K N L +F + LR VSWN++I G + +++S+ + M+ + F+
Sbjct: 257 LLSMYCKFNGLIDGRRIFDKMV--LRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFK 313
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD+ T+ S+L +C L G+ VH + I G++ D + N LI+MY+KCG++ +++ +
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F GM + VSW +MI+ Y Q G DEA++LF M+ + PD VT + ++S Q G L
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVK-PDSVTYVMLLSMSTQLGDL 432
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
LGK G N++V N L+DMY+KCG +GD+ ++F + + +++W T+IA C
Sbjct: 433 HLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC 492
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ + L + +M + P+ T L++L C+ +G + K+ + +
Sbjct: 493 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL-GLESD 551
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ + + ++ + G L+ + + M K D W L+ AC ++ G+
Sbjct: 552 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGE---GKKAVRAFG 607
Query: 556 ELEPHSAAP 564
E+E P
Sbjct: 608 EMEAAGIVP 616
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 243/499 (48%), Gaps = 7/499 (1%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD-KM 115
F I++A A + +H I+ + ++ YA ++ +F
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
P +V WN++I G + L L+ + + +Q D T + A + K
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
S+H + +G +D+ + N I Y + NDL A VF E LR VVSWNS+I G
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFE--EMPLRDVVSWNSLISGYNA 193
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
++++L Y G PD T+ S+L +C ++ +G ++H G DV V
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 253
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N L+SMY K + R +FD M R VSW MI GY+Q G +E+++LF M +
Sbjct: 254 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK 313
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
PDL+T+ S++ CG G LE GK+ +Y + G + + N LI+MY+KCG++ ++E
Sbjct: 314 -PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 372
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F + K VSW +MI NG F EA+ LF +MM+ D++P+ VT++ +L T G
Sbjct: 373 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 431
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L G + K+ N + + + D+ + G++ ++L ++M + D W T++
Sbjct: 432 LHLGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTII 489
Query: 536 CACKIHRNIEIGEYVAYRL 554
+C + +G + R+
Sbjct: 490 ASCVHSEDCNLGLRMISRM 508
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
++ I WN+ I V + + L + RM+ + P+ T I C+ L+ +
Sbjct: 478 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 537
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG I K SD+ V +++MY+KC L ++++F M +DV +W A+I G
Sbjct: 538 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 597
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+K + F M GI D V + + A H+
Sbjct: 598 EGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHS 631
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 319/586 (54%), Gaps = 19/586 (3%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M ++ + PNN TFPF KAC+ L+D + IH H + + +D+FV T ++DMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC--LFYNMRLVGIQADFVTVMGLT 162
L A +F MP RD+ +WNAM+ G+A G + L M++ ++ + T++ L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDAD----------VSVCNTWISAYAKCNDLKMAELV 212
L+ SVH++ I + + V + + YAKC L A V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF---RPDVTTVVSLLSSCV 269
F + R V+W+++IGG + + ++ M+ G P T++ S L +C
Sbjct: 181 FDAMPA--RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIASALRACA 236
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
+ L G +H+ G D++ N+L+SMY+K G ID A LFD M + VS++A
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
++SGY Q G +EA +F M+A PD T++S+I C AL+ G+ G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L +CNALIDMY+KCG I +R++F +P + +VSW TMIAG ++G EA LF
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M L P+ VTF+ +L AC+H+G + +G +F++M Y + P + HY CM DLL R
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L EA +F+QSMP+++D +W LL AC++++NI++G+ V+ + EL P +V ++
Sbjct: 477 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 536
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIY+ GR+D A +R + K KK PG S + ING F D
Sbjct: 537 NIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD 582
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+++ + V A +A L+F++M+ ++EP+ T + AC+ L+ + + HG ++
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 353
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S+ + ++DMYAKC R+D + ++F+ MP RD+ SWN MI G+ G ++
Sbjct: 354 IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATA 413
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
LF M +G D VT + L A H+
Sbjct: 414 LFLEMNNLGFPPDGVTFICLLSACSHS 440
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 316/571 (55%), Gaps = 5/571 (0%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
+K + P+N T+ F A + D +H H V F S++FV + +VD+Y K R
Sbjct: 97 LKNTTLSPDNFTYAF---AISASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSR 153
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
+ A K+FDKMPDRD WN MI G + + + +F +M G++ D TV + A
Sbjct: 154 VAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPA 213
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ + + + + +G D V IS ++KC D+ A L+F I + +V
Sbjct: 214 VAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKP--DLV 271
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
S+N++I G + + + ++ ++R ++ G R +T+V L+ L +
Sbjct: 272 SYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFC 331
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ G L SV L ++YS+ +ID AR LFD ++T +W AMISGYAQ G + A+
Sbjct: 332 VKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAI 391
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
LF M P+ VT+ S++S C Q GAL GK S L+ N+ V ALIDMY
Sbjct: 392 SLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMY 451
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCG+I +A +LF EK V+W TMI G L+G EAL LF++M+ L +P+ VTFL
Sbjct: 452 AKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFL 511
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
+VL AC+HAG + +G F+ M Y++ P HY+CM D+LGR G+L++AL+F++ MP+
Sbjct: 512 SVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPV 571
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ +WGTLL AC IH++ + + RLFEL+P + YV ++NIY++ + A++
Sbjct: 572 EPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASV 631
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R +K+ + K PG +L+ +NG F D
Sbjct: 632 REAVKKRNLSKTPGCTLIEVNGTPHVFVCGD 662
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 209/461 (45%), Gaps = 32/461 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V ++ +F+ M + ++ T + A A++ + I +
Sbjct: 172 WNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLAL 231
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F D +V T ++ +++KC+ +D A LF + D+ S+NA+I GF+ G E +
Sbjct: 232 KLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVK 291
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F + + G + T++GL + HL L + F + G SV + Y+
Sbjct: 292 YFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYS 351
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ N++ +A +F E +TV +WN++I G + +++ ++ M+ F P+ T+
Sbjct: 352 RLNEIDLARQLFD--ESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTI 409
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C AL G+ VH + ++ V LI MY+KCG+I A LFD +
Sbjct: 410 TSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE 469
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W MI GY G DEAL+LF M G P VT LS++ C +G + G
Sbjct: 470 KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEI 529
Query: 382 --------------DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVV 426
++YAC ++D+ + G + A E +P E
Sbjct: 530 FHAMVNKYRIEPLAEHYAC-------------MVDILGRAGQLEKALEFIRKMPVEPGPA 576
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
W T++ C ++ + A ++ ELD P V + +L
Sbjct: 577 VWGTLLGACMIHKDTNLARVASERLFELD--PGNVGYYVLL 615
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 2 AASSLPPRLNKI---------YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP 52
A +++ RLN+I T+ WN+ I A+ LF+ M + P
Sbjct: 345 ALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTP 404
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
N +T I ACA+L + + +H I +I+V T ++DMYAKC + A +LF
Sbjct: 405 NPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLF 464
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
D +++ +WN MI G+ G+ ++ L LF M +G Q VT + + A HA
Sbjct: 465 DLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHA 520
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/602 (33%), Positives = 309/602 (51%), Gaps = 2/602 (0%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
+ + ++ WN I + A +A LF M++ +EP+ TF I AC+ + +
Sbjct: 89 FSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWG 148
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH ++++ +D V ++ MYAKC + A ++FD M RD SW + +A+
Sbjct: 149 REIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES 208
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G+ E+ L ++ M ++ +T M + A L K +H+ + +DV V
Sbjct: 209 GYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVS 268
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
Y KC K A VF + R V++WN++I G + +++ + M+ +G
Sbjct: 269 TALTKMYMKCGAFKDAREVFECL--SYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEG 326
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T ++LS+C P L +G+ +H+ G DV N LI+MYSK G + AR
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDAR 386
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD M R VSWT ++ YA + E+ F M G + +T + ++ C
Sbjct: 387 QVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
AL+ GK GL ++ V NAL+ MY KCGS+ DA +F + + VV+W T+I
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G NG +EAL + M +RPN TF+ VL AC +E+G F M+K Y +
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIV 566
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P HY+CM D+L R G L+EA D + ++P+K A +WG LL AC+IH N+EIGE A
Sbjct: 567 PTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEH 626
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+LEP +A YV ++ IYA G W VA LR MK VKK PG+S + I G+ +F
Sbjct: 627 CLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVA 686
Query: 614 ED 615
D
Sbjct: 687 RD 688
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 249/483 (51%), Gaps = 22/483 (4%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
++C K D + +H HI++ ++++ T++ +YA C ++ A +LFDK ++ V
Sbjct: 36 QSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVV 95
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
SWN MI G+A G ++ LF M+ ++ D T + + A L+ + +H
Sbjct: 96 SWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRV 155
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+ G+ D +V N IS YAKC ++ A VF + R VSW ++ G ++
Sbjct: 156 MEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMAS--RDEVSWTTLTGAYAESGYGEE 213
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
SL Y M+ + RP T +++LS+C AL +G+ +H+H + + DV V L
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTK 273
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY KCG AR +F+ + R ++W MI G+ G L+EA F M G PD T
Sbjct: 274 MYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRAT 333
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++S C + G L GK A GL +V NALI+MYSK GS+ DAR++F +P
Sbjct: 334 YTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 393
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ VVSWTT++ A + VE+ F QM++ ++ N++T++ VL+AC++ L+ WG
Sbjct: 394 KRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALK--WG 451
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLG---------RKGKLKEALDFVQSMPIKSDAGIWG 532
+++ E+ +ADL + G +++A+ + M ++ D W
Sbjct: 452 --------KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWN 502
Query: 533 TLL 535
TL+
Sbjct: 503 TLI 505
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 196/386 (50%), Gaps = 4/386 (1%)
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
G Q D + L Q+ + AK L++ K VH + GV +V + NT + YA C + A
Sbjct: 23 GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA 82
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+F ++VVSWN +I G + ++ N + M + PD T VS+LS+C
Sbjct: 83 RQLFDKFSN--KSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
P L GR +H + G D +V N LISMY+KCG + AR +FD M R VSWT
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+ YA+ G +E+L+ + AM P +T ++++S CG ALE GK +
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESE 260
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+V V AL MY KCG+ DARE+F L + V++W TMI G +G+ EA FH
Sbjct: 261 YHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFH 320
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M+E + P+R T+ VL AC G L +G K V+ ++ + + ++ +
Sbjct: 321 RMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVS-DVRFGNALINMYSKA 379
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLL 535
G +K+A MP K D W TLL
Sbjct: 380 GSMKDARQVFDRMP-KRDVVSWTTLL 404
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 303/542 (55%), Gaps = 1/542 (0%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH ++ F+ T ++ + + A ++FD +P + WNA+I G+++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L ++ NM+L + D T L +A HL + + VH+ +G DADV V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ YAKC L A VF G+ RT+VSW +I+ + ++L + M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD +VS+L++ C + L QGR +H+ + G +++ ++ +L +MY+KCG + +A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M + W AMISGYA+ G EA+ +F M PD +++ S IS C Q G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+LE + Y +D+V + +ALIDM++KCGS+ AR +F ++ VV W+ MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G L+G EA+ L+ M + PN VTFL +L AC H+G + +GW +FN M +++N
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKIN 456
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P+ HY+C+ DLLGR G L +A + ++ MP++ +WG LL ACK HR++E+GEY A +
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LF ++P + YV+++N+YA WD VA +R MK + K G S V + G+ F V
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 614 ED 615
D
Sbjct: 577 GD 578
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 218/420 (51%), Gaps = 5/420 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ IR N ALL++ M+ + P++ TFP + KAC+ LS + +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD--KMPDRDVASWNAMIVGFAQMGFL 136
+ + F +D+FVQ ++ +YAKC RL A +F+ +P+R + SW A++ +AQ G
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L +F MR + ++ D+V ++ + A + L +S+H+ + +G++ + + +
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC + A+++F ++ ++ WN++I G ++++ + MI RP
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSP--NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D ++ S +S+C +L Q R ++ + + DV + + LI M++KCG ++ AR +F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D DR V W+AMI GY G EA+ L+ AME G P+ VT L ++ C SG +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G WF N + +ID+ + G + A E+ +P + V W +++ C
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 185/376 (49%), Gaps = 6/376 (1%)
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
A H + LK +H+ + +G+ + I A + D+ A VF + + WN
Sbjct: 31 ATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP--QIFPWN 88
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+II G + + F D+L Y +M PD T LL +C L GR VH+
Sbjct: 89 AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRL 148
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDG--MCDRTRVSWTAMISGYAQKGDLDEALR 345
GFD DV V N LI++Y+KC + SAR +F+G + +RT VSWTA++S YAQ G+ EAL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
+F M PD V ++S+++ L+ G+ GL+ + +L MY+
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCG + A+ LF + ++ W MI+G A NG EA+D+FH+M+ D+RP+ ++ +
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
+ AC G LE+ + + + ++ S + D+ + G + E V +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLD 386
Query: 526 SDAGIWGTLLCACKIH 541
D +W ++ +H
Sbjct: 387 RDVVVWSAMIVGYGLH 402
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 148/318 (46%), Gaps = 5/318 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI W + + E +AL +F +M+K D++P+ + + A L D + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+VK + + ++ MYAKC ++ A LFDKM ++ WNAMI G+A+ G+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + +F+ M ++ D +++ A L +S++ + DV + + I
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 198 SAYAKCNDLKMAELVF-RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+AKC ++ A LVF R ++ R VV W+++I G + ++++ YR M G P
Sbjct: 366 DMFAKCGSVEGARLVFDRTLD---RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T + LL +C + +G + + + +I + + G +D A +
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 317 DGMCDRTRVS-WTAMISG 333
M + V+ W A++S
Sbjct: 483 KCMPVQPGVTVWGALLSA 500
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S + WN+ I A +A+ +F M D+ P+ ++ ACA++ ++
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++ ++ +S + D+F+ + ++DM+AKC ++ A +FD+ DRDV W+AMIVG+ G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + L+ M G+ + VT +GL A H+
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/597 (35%), Positives = 332/597 (55%), Gaps = 8/597 (1%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKAL-LLFRRMKKNDIEPNNLTFPFIAKA 63
SL K + I WNS + V + ++ + + + + P+ TFP + KA
Sbjct: 100 SLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKA 159
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C L+D + +H ++K F D++V +++ +Y++ ++ A+K+F MP RDV SW
Sbjct: 160 CLSLAD---GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSW 216
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NAMI GF Q G + + L + M+ ++ D VTV + + + VH + I
Sbjct: 217 NAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK 276
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G+++DV V N I+ Y+K L+ A+ VF G+E +R +VSWNSII D +L
Sbjct: 277 HGLESDVFVSNALINMYSKFGRLQDAQRVFDGME--VRDLVSWNSIIAAYEQNDDPVTAL 334
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISM 302
F++ M++ G RPD+ TVVSL S GR VH + ++D+ + N L++M
Sbjct: 335 GFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNM 394
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VPDLVT 361
Y+K G ID AR +F+ + R +SW +I+GYAQ G EA+ + ME VP+ T
Sbjct: 395 YAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGT 454
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+S++ GAL+ G L +V V LIDMY KCG + DA LFY +P
Sbjct: 455 WVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP 514
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++T V W +I+ ++G +AL LF M ++ + +TF+++L AC+H+G +++
Sbjct: 515 QETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQW 574
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
F+ M K Y++ P L HY CM DL GR G L++A + V +MPI++DA IWGTLL AC+IH
Sbjct: 575 CFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIH 634
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
N E+G + + RL E++ + YV ++NIYA G+W+G +R++ + ++K PG
Sbjct: 635 GNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPG 691
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 258/488 (52%), Gaps = 13/488 (2%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F + ++C ++ ++ +H ++ D+ + T +V +YA L + F +
Sbjct: 54 FNLVFRSCTNIN---VAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 117 DRDVASWNAMIVGFAQMG-FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
+++ SWN+M+ + + G + + + C+ + L G++ DF T + +A + L+ +
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGE 167
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+H + + +G + DV V + I Y++ +++A VF ++ +R V SWN++I G
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVF--VDMPVRDVGSWNAMISGFCQ 225
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
++L M + + D TV S+L C +V G LVH + I +G + DV V
Sbjct: 226 NGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFV 285
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N LI+MYSK G + A+ +FDGM R VSW ++I+ Y Q D AL F M G
Sbjct: 286 SNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGM 345
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACS-GGLKDNVMVCNALIDMYSKCGSIGDAR 414
PDL+TV+S+ S GQ +G+ + L+ ++++ NAL++MY+K GSI AR
Sbjct: 346 RPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCAR 405
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME-LDLRPNRVTFLAVLQACTHA 473
+F LP + V+SW T+I G A NG EA+D ++ M E + PN+ T++++L A +H
Sbjct: 406 AVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHV 465
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G L++G + K + ++ +C+ D+ G+ G+L++A+ +P ++ W
Sbjct: 466 GALQQGMKIHGRLIK-NCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNA 523
Query: 534 LLCACKIH 541
++ + IH
Sbjct: 524 IISSLGIH 531
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/591 (34%), Positives = 321/591 (54%), Gaps = 4/591 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I ++AL ++ R + + P++ T + +AC L +IHG I
Sbjct: 242 SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLI 301
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K D+ V ++ MY K + L ++FDKM RD SWN MI G++Q+G E+ +
Sbjct: 302 EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESI 361
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M + + D +T+ + QA H L K VH + I G + D + N I+ Y
Sbjct: 362 KLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMY 420
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC +L ++ VF G++ + VSWNS+I FD+++ ++ M D +PD T
Sbjct: 421 AKCGNLLASQEVFSGMK--CKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVT 477
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V LLS L G+ +H GF+ ++ V NTL+ MY+KCG++ + +F+ M
Sbjct: 478 YVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK 537
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R ++W +I+ D + LR+ M G PD+ T+LS++ C A GK
Sbjct: 538 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 597
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
GL+ +V V N LI+MYSKCGS+ ++ ++F + K VV+WT +I+ C + GE
Sbjct: 598 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 657
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+A+ F +M + P+ V F+A++ AC+H+G +E+G YF+ M K Y++ P + HY+
Sbjct: 658 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYA 717
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R L +A DF+ SMP+K D+ IWG LL AC++ + EI + V+ R+ EL P
Sbjct: 718 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPD 777
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
YV ++N+YA G+WD V ++R +K +KK PG S + I K F
Sbjct: 778 DTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVF 828
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 280/526 (53%), Gaps = 6/526 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S+ + WNS IR +AL L+ ++ ++P+ TFP + ACA L DF ++
Sbjct: 136 SNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 195
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++ F SD+++ ++DMY + + LD A K+F++MP RDV SWN++I G+ G+
Sbjct: 196 IHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 255
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L ++Y R +G+ D T+ + +A + +H IG+ DV V N
Sbjct: 256 WNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 315
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+S Y K N L +F + LR VSWN++I G + +++S+ + M+ + F+
Sbjct: 316 LLSMYCKFNGLIDGRRIFDKMV--LRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFK 372
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD+ T+ S+L +C L G+ VH + I G++ D + N LI+MY+KCG++ +++ +
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F GM + VSW +MI+ Y Q G DEA++LF M+ + PD VT + ++S Q G L
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVK-PDSVTYVMLLSMSTQLGDL 491
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
LGK G N++V N L+DMY+KCG +GD+ ++F + + +++W T+IA C
Sbjct: 492 XLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC 551
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ + L + +M + P+ T L++L C+ +G + K+ + +
Sbjct: 552 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL-GLESD 610
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + + ++ + G L+ + + M K D W L+ AC ++
Sbjct: 611 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMY 655
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 243/499 (48%), Gaps = 7/499 (1%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD-KM 115
F I++A A + +H I+ + ++ YA ++ +F
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
P +V WN++I G + L L+ + + +Q D T + A + K
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
S+H + +G +D+ + N I Y + NDL A VF E LR VVSWNS+I G
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFE--EMPLRDVVSWNSLISGYNA 252
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
++++L Y G PD T+ S+L +C ++ +G ++H G DV V
Sbjct: 253 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 312
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N L+SMY K + R +FD M R VSW MI GY+Q G +E+++LF M +
Sbjct: 313 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK 372
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
PDL+T+ S++ CG G LE GK+ +Y + G + + N LI+MY+KCG++ ++E
Sbjct: 373 -PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 431
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F + K VSW +MI NG F EA+ LF +MM+ D++P+ VT++ +L T G
Sbjct: 432 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 490
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L G + K+ N + + + D+ + G++ ++L ++M + D W T++
Sbjct: 491 LXLGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTII 548
Query: 536 CACKIHRNIEIGEYVAYRL 554
+C + +G + R+
Sbjct: 549 ASCVHSEDCNLGLRMISRM 567
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
++ I WN+ I V + + L + RM+ + P+ T I C+ L+ +
Sbjct: 537 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 596
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG I K SD+ V +++MY+KC L ++++F M +DV +W A+I G
Sbjct: 597 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 656
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+K + F M GI D V + + A H+
Sbjct: 657 EGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHS 690
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/581 (34%), Positives = 321/581 (55%), Gaps = 12/581 (2%)
Query: 40 LLFRRMKK-----NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
L+F+++ + + + TFPF+ KACAKL + +H HI+ + F + +FVQT
Sbjct: 9 LIFKQIPSLSSHTSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTA 68
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
+VD+Y+KC A +FD+MP + + SWN++I + +++ + M+L+G++
Sbjct: 69 LVDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELS 128
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T G + + LS +H + +G+D + + N+ +S Y + N + A VF
Sbjct: 129 SATFTGFLASCSLPQGLS----IHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFY 184
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ + +++VSW I+GG + M PD V+L+S C L
Sbjct: 185 TLHQ--KSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNL 242
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+ LVHS + GFD + N L++MY+KC D+ SAR +FD + +++ WT+MISGY
Sbjct: 243 LLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGY 302
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
AQ G +EAL LF + P+ +T+ +++S C + G+L +G+ + Y GL ++
Sbjct: 303 AQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDL 362
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-E 453
V +LI M+ KCGSI A+ LF +P K + W+ MI G A++G EAL+LFH+M E
Sbjct: 363 RVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNE 422
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
+ ++P+ + + +VL AC+H+G +E G YF M K + + P + HYSC+ DLLGR G ++
Sbjct: 423 VGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVE 482
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYA 573
AL +Q MP+ A +W L AC H N+E+GE+ A LF+LEP S +V M N+Y
Sbjct: 483 LALRTIQEMPVLVQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYT 542
Query: 574 LGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
G+W A R+++ + K PG S + I+G E
Sbjct: 543 SMGKWKEAAKARSIINARGLVKEPGWSQIEIDGAVHVLAAE 583
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 144/316 (45%), Gaps = 15/316 (4%)
Query: 9 RLNKI---------YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPF 59
RLN+I +I W + + + K +F +M+ + P+++ F
Sbjct: 172 RLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVN 231
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ C + L + ++H ++KS F + +V MYAKC L A ++FD + ++
Sbjct: 232 LISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKS 291
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V W +MI G+AQ G+ + L LF + + + +T+ + A L + + +
Sbjct: 292 VFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQ 351
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+ + G+ +D+ V + I + KC +K A+ +F I + + W+++I G
Sbjct: 352 YILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPN--KDLAVWSAMINGYAVHGMG 409
Query: 240 DDSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV--I 296
++LN + M + G +PD S+L +C L++ L + + F ++ S+
Sbjct: 410 KEALNLFHKMQNEVGIKPDAIVYTSVLLAC-SHSGLIEDGLKYFRSMQKDFGIEPSIQHY 468
Query: 297 NTLISMYSKCGDIDSA 312
+ L+ + + G ++ A
Sbjct: 469 SCLVDLLGRAGYVELA 484
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 327/594 (55%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V + + L L++ M + + TF ++CA LS F +H + +
Sbjct: 239 WSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYAL 298
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F D V T +DMYAKCDR+ A K+F+ P+ S NA+IVG+A+ + + L
Sbjct: 299 KTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALE 358
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F +++ + D +++ G A K +H + G+D ++ V NT + YA
Sbjct: 359 IFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYA 418
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A L+F +E ++ VSWN+II + +++L + M+ PD T
Sbjct: 419 KCGALMEACLIFDDME--IKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTF 476
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S++ +C +AL G VH I G LD V + +I MY KCG + A + + + +
Sbjct: 477 GSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEE 536
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
RT VSW ++ISG++ + + AL F M G +PD T +++ C +ELGK
Sbjct: 537 RTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQI 596
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L +V + + ++DMYSKCG++ D+R +F P++ V+W+ MI A +G
Sbjct: 597 HGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+A+ LF +M +++PN F++VL+AC H GF++KG YF M Y ++P++ HYSC
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSC 716
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G++ EAL+ ++SMP ++D IW TLL C++ N+E+ E A L +L+P
Sbjct: 717 MVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQD 776
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ YV ++N+YA+ G W VA +R+ MK ++KK PG S + + + F V D
Sbjct: 777 SSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGD 830
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 259/535 (48%), Gaps = 8/535 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + K++ +F +M+ +I+ + TF + KAC + D+ +H +
Sbjct: 138 WNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAI 197
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD+ T +VDMY+ C +LD A+ +F +MP+R+ W+A+I G+ + + L
Sbjct: 198 QMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLK 257
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ M G+ T ++ L +H++ + D V + YA
Sbjct: 258 LYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYA 317
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC+ + A VF R S N++I G D+ ++L +R + D ++
Sbjct: 318 KCDRMVDARKVFNTFPNPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISL 375
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
L++C + ++G +H + G D ++ V NT++ MY+KCG + A +FD M
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A+I+ + Q ++E L LF +M + PD T S++ C AL G
Sbjct: 436 KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEV 495
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G+ + V +A+IDMY KCG + +A ++ L E+T VSW ++I+G + +
Sbjct: 496 HGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQG 555
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL F +M+++ + P+ T+ VL C + +E G + K+ Q++ ++ S
Sbjct: 556 ENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKL-QLHSDVYIAST 614
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ D+ + G ++++ + P K D W ++CA H +GE A +LFE
Sbjct: 615 IVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYHG---LGE-DAIKLFE 664
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 211/467 (45%), Gaps = 34/467 (7%)
Query: 45 MKKNDIEPNN-LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD 103
+ N + P LTF I + C+ L + H I + F +FV ++ Y KC
Sbjct: 28 ISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCL 87
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFA-------------------------------Q 132
L+ A+ +FDKMP RDV SWN MI G+A Q
Sbjct: 88 NLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQ 147
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
GF K + +F MRL+ IQ D+ T + +A + L VH I +G D+DV
Sbjct: 148 NGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVT 207
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ Y+ C L A +F + E R V W+++I G D+F + L Y+ M+ +
Sbjct: 208 GTALVDMYSTCKKLDHAFNIFCEMPE--RNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDE 265
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G T S SC A G +H++ + F D V + MY+KC + A
Sbjct: 266 GMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDA 325
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R +F+ + TR S A+I GYA++ + EAL +F +++ + D +++ ++ C
Sbjct: 326 RKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAI 385
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G A GL N+ V N ++DMY+KCG++ +A +F + K VSW +I
Sbjct: 386 KGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAII 445
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A N E L LF M+ + P+ TF +V++AC L G
Sbjct: 446 AAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYG 492
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 221/444 (49%), Gaps = 4/444 (0%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
+ + T N+ I +++ +AL +FR ++K+ ++ + ++ AC+ + +L
Sbjct: 332 FPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+HG VK +I V T++DMYAKC L A +FD M +D SWNA+I Q
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQN 451
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+E+ L LF +M ++ D T + +A K L+ VH I G+ D V
Sbjct: 452 EHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG 511
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ I Y KC L AE + +EE RT VSWNSII G + + +++L+++ M+ G
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEE--RTTVSWNSIISGFSSEKQGENALSYFSRMLQVG 569
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T ++L C + G+ +H + DV + +T++ MYSKCG++ +R
Sbjct: 570 VIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSR 629
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F+ R V+W+AMI YA G ++A++LF M+ P+ +S++ C G
Sbjct: 630 IMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMG 689
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
++ G +F GL + + ++D+ + G + +A EL ++P E V W T+
Sbjct: 690 FVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTL 749
Query: 432 IAGCALNGEFVEALDLFHQMMELD 455
+ C L G A + +++LD
Sbjct: 750 LGICRLQGNVEVAEKAANSLLQLD 773
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 6/228 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
++++ T WNS I + + AL F RM + + P+N T+ + CA L+
Sbjct: 529 KIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLA 588
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IHG I+K SD+++ +T+VDMY+KC + + +F+K P RD +W+AMI
Sbjct: 589 TVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMIC 648
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF---GIHIG 185
+A G E + LF M+L ++ + + + +A H + K +H F H G
Sbjct: 649 AYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVD--KGLHYFREMRSHYG 706
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+D + + + + + A + + V+ W +++G C
Sbjct: 707 LDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVI-WRTLLGIC 753
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 33/153 (21%)
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+T + C A+ GK G V V N L+ Y KC ++ A +F
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 420 LPEKTVVSWTTMIAG------------------------------CAL-NGEFVEALDLF 448
+P++ V+SW TMI G C L NG +++++F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+M L+++ + TF VL+ACT G + G G
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACT--GIEDYGLG 189
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 319/597 (53%), Gaps = 3/597 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ QWN ++ A +A+ LF M+ I N F + A A L D Y + IH
Sbjct: 55 VQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHA 114
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ K F SDI + V MY K ++ ++ F M ++AS N ++ GF ++
Sbjct: 115 CVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQ 174
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ + + G + + T + + + L+ K++H I G++ D + N+ ++
Sbjct: 175 GPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVN 234
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC A VF I E R VVSW ++I G + + L + M+ +GF P++
Sbjct: 235 VYAKCGSANYACKVFGEIPE--RDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNM 291
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +S+L SC + G+ VH+ + D + V L+ MY+K ++ A +F+
Sbjct: 292 YTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNR 351
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ R +WT +++GYAQ G ++A++ F M+ G P+ T+ S +SGC + L+ G
Sbjct: 352 LIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 411
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + A G ++ V +AL+DMY+KCG + DA +F L + VSW T+I G + +
Sbjct: 412 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 471
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+ +AL F M++ P+ VTF+ VL AC+H G +E+G +FN ++K+Y + P + H
Sbjct: 472 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 531
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM D+LGR GK E F++ M + S+ IW T+L ACK+H NIE GE A +LFELE
Sbjct: 532 YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 591
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + Y+ ++N++A G WD V N+R +M VKK PG S V +NG+ F D
Sbjct: 592 PEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHD 648
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 231/462 (50%), Gaps = 5/462 (1%)
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
++K+ D + +++V++Y KC+ L CA ++ ++MP +DV WN + L++
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LFY MR I+ + L AA +S+H+ G ++D+ + N +++
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y K ++ F+ + + + S N+++ G + D ++ +GF P++
Sbjct: 135 YMKTQSVENGWQFFKAMM--IENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMY 192
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T +S+L +C L +G+ +H I G + D + N+L+++Y+KCG + A +F +
Sbjct: 193 TFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI 252
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+R VSWTA+I+G+ +G LR+F M A G P++ T +S++ C ++LGK
Sbjct: 253 PERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 311
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
L N V AL+DMY+K + DA +F L ++ + +WT ++AG A +G
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ +A+ F QM ++PN T + L C+ L+ G ++ K Q + ++
Sbjct: 372 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ-SGDMFVA 430
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
S + D+ + G +++A + V + D W T++C H
Sbjct: 431 SALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQH 471
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 140/299 (46%), Gaps = 3/299 (1%)
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+LK + I G+ D + ++ ++ Y KC L+ A V E ++ V WN +
Sbjct: 7 ILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLE--EMPIQDVQQWNQKLSS 64
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
+++ + M + R + SL+S+ G +H+ YGF+ D
Sbjct: 65 ANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESD 124
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ + N ++MY K +++ F M S ++SG+ D+ R+ +
Sbjct: 125 ILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLV 184
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G P++ T +S++ C G L GK G+ + + N+L+++Y+KCGS
Sbjct: 185 EGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANY 244
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A ++F +PE+ VVSWT +I G G + L +F+QM+ PN TF+++L++C+
Sbjct: 245 ACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCS 302
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 308/581 (53%), Gaps = 2/581 (0%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
KA+ LF+RM+ + +EP++ T + AC+ Q +H + K F S+ ++
Sbjct: 353 GEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGA 412
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++++YAKC ++ A F + +V WN M+V + + L +F M++ I +
Sbjct: 413 LLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 472
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + + I L L + +HS I + VC+ I YAK L A +
Sbjct: 473 QYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDIL- 531
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I + VVSW ++I G T + D +L +R M+ G R D + + +S+C +AL
Sbjct: 532 -IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 590
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+G+ +H+ GF D+ N L+++YSKCG+I+ A F+ ++W A++SG+
Sbjct: 591 KEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGF 650
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G+ +EALR+F M G + T S + ++ ++ GK G
Sbjct: 651 QQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 710
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
VCNA+I MY+KCGSI DA++ F L K VSW MI + +G EALD F QM+
Sbjct: 711 EVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHS 770
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++RPN VT + VL AC+H G ++KG YF M Y + P+ HY C+ D+L R G L
Sbjct: 771 NVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSR 830
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
A DF+ MPI+ DA +W TLL AC +H+N+EIGE+ A+ L ELEP +A YV ++N+YA+
Sbjct: 831 AKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 890
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+WD R MK VKK PGQS + + +F V D
Sbjct: 891 CRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 931
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 154/542 (28%), Positives = 254/542 (46%), Gaps = 13/542 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS-DFLYSQMI 76
TI WN I+E ++ + K LF RM ++ PN TF + +AC S F + I
Sbjct: 133 TIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQI 192
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ V ++D+Y++ +D A ++FD + +D +SW AMI G ++
Sbjct: 193 HARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECE 252
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ + LF +M ++GI + A + L + + +H + +G +D VCN
Sbjct: 253 VEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 312
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG---CTYGDKFDDSLNFYRHMIYDG 253
+S Y L AE +F + + R V++N++I G C YG+K ++ ++ M DG
Sbjct: 313 VSLYFHLGSLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEK---AMELFKRMQLDG 367
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T+ SL+ +C L G+ +H++ GF + + L+++Y+KC DI++A
Sbjct: 368 LEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETAL 427
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F V W M+ Y DL + R+F M+ VP+ T S++ C + G
Sbjct: 428 NYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 487
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
LELG+ + + N VC+ LIDMY+K G + A ++ K VVSWTTMIA
Sbjct: 488 DLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 547
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G +AL F QM++ +R + V + AC L++G + V +
Sbjct: 548 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ-QIHAQACVSGFS 606
Query: 494 PELNHYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+L + + L + G ++EA L F Q+ D W L+ + N E V
Sbjct: 607 SDLPFQNALVTLYSKCGNIEEAYLAFEQTEA--GDNIAWNALVSGFQQSGNNEEALRVFA 664
Query: 553 RL 554
R+
Sbjct: 665 RM 666
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 241/514 (46%), Gaps = 5/514 (0%)
Query: 29 AVDKNEAH-KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS 87
+ KNE +A+ LF M I P F + AC K+ + +HG ++K F S
Sbjct: 245 GLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 304
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D +V +V +Y L A +F M RD ++N +I G +Q G+ EK + LF M+
Sbjct: 305 DTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQ 364
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
L G++ D T+ L A L + +H++ +G ++ + ++ YAKC+D++
Sbjct: 365 LDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIE 424
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F +E + VV WN ++ D +S +R M + P+ T S+L +
Sbjct: 425 TALNYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 482
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C+ L G +HS I F L+ V + LI MY+K G +D+A + + VSW
Sbjct: 483 CIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 542
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
T MI+GY Q D+AL F M G D V + + +S C AL+ G+ AC
Sbjct: 543 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 602
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G ++ NAL+ +YSKCG+I +A F ++W +++G +G EAL +
Sbjct: 603 SGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 662
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F +M + N TF + ++A + +++G ++TK + E + + +
Sbjct: 663 FARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNAIISMYA 721
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ G + +A + +K++ W ++ A H
Sbjct: 722 KCGSISDAKKQFLELSMKNEVS-WNAMINAYSKH 754
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 232/490 (47%), Gaps = 10/490 (2%)
Query: 50 IEPNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
I PN+ T ++ + C K + L + +H I+K F ++ + ++D Y LD A
Sbjct: 63 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
K+FD+MP+R + +WN MI A KV CLF M + + T G+ +A
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 169 K-HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+++ +H+ I+ G+ VCN I Y++ + A VF G+ L+ SW
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLY--LKDHSSWV 240
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++I G + + +++ + M G P S+LS+C E+L G +H +
Sbjct: 241 AMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 300
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF D V N L+S+Y G + SA +F M R V++ +I+G +Q G ++A+ LF
Sbjct: 301 GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 360
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M+ G PD T+ S++ C G L G+ Y G N + AL+++Y+KC
Sbjct: 361 KRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKC 420
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
I A F + VV W M+ L + + +F QM ++ PN+ T+ ++L
Sbjct: 421 SDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 480
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQSMPIK 525
+ C G LE G + +++ + + +LN Y C + D+ + GKL A D + K
Sbjct: 481 KTCIRLGDLELGE---QIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 537
Query: 526 SDAGIWGTLL 535
D W T++
Sbjct: 538 -DVVSWTTMI 546
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 144/314 (45%), Gaps = 4/314 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N KAL FR+M I + + ACA L Q IH
Sbjct: 542 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 601
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F SD+ Q +V +Y+KC ++ AY F++ D +WNA++ GF Q G E+ L
Sbjct: 602 VSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 661
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M GI ++ T +AA ++ K VH+ G D++ VCN IS YA
Sbjct: 662 VFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYA 721
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A+ F +E ++ VSWN++I + ++L+ + MI+ RP+ T+
Sbjct: 722 KCGSISDAKKQF--LELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 779
Query: 262 VSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR-FLFDGM 319
V +LS+C + +G S YG ++ M ++ G + A+ F+ +
Sbjct: 780 VGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMP 839
Query: 320 CDRTRVSWTAMISG 333
+ + W ++S
Sbjct: 840 IEPDALVWRTLLSA 853
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 307/581 (52%), Gaps = 2/581 (0%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
KA+ LF+RM + +EP++ T + AC+ Q +H + K F S+ ++
Sbjct: 330 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 389
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++++YAKC ++ A F + +V WN M+V + + L +F M++ I +
Sbjct: 390 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 449
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + + I L L + +HS I + VC+ I YAK L A +
Sbjct: 450 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL- 508
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I + VVSW ++I G T + D +L +R M+ G R D + + +S+C +AL
Sbjct: 509 -IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 567
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+G+ +H+ GF D+ N L+++YS+CG I+ + F+ ++W A++SG+
Sbjct: 568 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 627
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G+ +EALR+F M G + T S + ++ ++ GK G
Sbjct: 628 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 687
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
VCNALI MY+KCGSI DA + F + K VSW +I + +G EALD F QM+
Sbjct: 688 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 747
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++RPN VT + VL AC+H G ++KG YF M Y ++P+ HY C+ D+L R G L
Sbjct: 748 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 807
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
A +F+Q MPIK DA +W TLL AC +H+N+EIGE+ A+ L ELEP +A YV ++N+YA+
Sbjct: 808 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 867
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+WD R MK VKK PGQS + + +F V D
Sbjct: 868 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 908
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 256/542 (47%), Gaps = 13/542 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS-DFLYSQMI 76
TI WN I+E +N + LF RM ++ PN TF + +AC S F + I
Sbjct: 110 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 169
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ V ++D+Y++ +D A ++FD + +D +SW AMI G ++
Sbjct: 170 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 229
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ + LF +M ++GI + A + L + + +H + +G +D VCN
Sbjct: 230 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 289
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG---CTYGDKFDDSLNFYRHMIYDG 253
+S Y +L AE +F + + R V++N++I G C YG+K ++ ++ M DG
Sbjct: 290 VSLYFHLGNLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEK---AMELFKRMHLDG 344
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T+ SL+ +C L +G+ +H++ GF + + L+++Y+KC DI++A
Sbjct: 345 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 404
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F V W M+ Y DL + R+F M+ VP+ T S++ C + G
Sbjct: 405 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 464
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
LELG+ + + N VC+ LIDMY+K G + A ++ K VVSWTTMIA
Sbjct: 465 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 524
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G +AL F QM++ +R + V + AC L++G + V +
Sbjct: 525 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ-QIHAQACVSGFS 583
Query: 494 PELNHYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+L + + L R GK++E+ L F Q+ D W L+ + N E V
Sbjct: 584 SDLPFQNALVTLYSRCGKIEESYLAFEQTEA--GDNIAWNALVSGFQQSGNNEEALRVFV 641
Query: 553 RL 554
R+
Sbjct: 642 RM 643
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 218/462 (47%), Gaps = 3/462 (0%)
Query: 29 AVDKNEAH-KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS 87
+ KNE +A+ LF M I P F + AC K+ + +HG ++K F S
Sbjct: 222 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 281
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D +V +V +Y L A +F M RD ++N +I G +Q G+ EK + LF M
Sbjct: 282 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 341
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
L G++ D T+ L A L + +H++ +G ++ + ++ YAKC D++
Sbjct: 342 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 401
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F +E + VV WN ++ D +S +R M + P+ T S+L +
Sbjct: 402 TALDYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 459
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C+ L G +HS I F L+ V + LI MY+K G +D+A + + VSW
Sbjct: 460 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 519
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
T MI+GY Q D+AL F M G D V + + +S C AL+ G+ AC
Sbjct: 520 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 579
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G ++ NAL+ +YS+CG I ++ F ++W +++G +G EAL +
Sbjct: 580 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 639
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
F +M + N TF + ++A + +++G ++TK
Sbjct: 640 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 681
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 232/490 (47%), Gaps = 10/490 (2%)
Query: 50 IEPNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
I PN+ T ++ + C K + L + +H I+K S+ + + D Y L A
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+K+FD+MP+R + +WN MI A + +V LF M + + T G+ +A
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159
Query: 169 K-HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+++ +H+ ++ G+ VCN I Y++ + +A VF G+ L+ SW
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR--LKDHSSWV 217
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++I G + + +++ + M G P S+LS+C E+L G +H +
Sbjct: 218 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 277
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF D V N L+S+Y G++ SA +F M R V++ +I+G +Q G ++A+ LF
Sbjct: 278 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 337
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD T+ S++ C G L G+ Y G N + AL+++Y+KC
Sbjct: 338 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 397
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
I A + F + VV W M+ L + + +F QM ++ PN+ T+ ++L
Sbjct: 398 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 457
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQSMPIK 525
+ C G LE G + +++ + N +LN Y C + D+ + GKL A D + K
Sbjct: 458 KTCIRLGDLELGE---QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 514
Query: 526 SDAGIWGTLL 535
D W T++
Sbjct: 515 -DVVSWTTMI 523
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N KAL FR+M I + + ACA L Q IH
Sbjct: 519 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 578
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F SD+ Q +V +Y++C +++ +Y F++ D +WNA++ GF Q G E+ L
Sbjct: 579 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 638
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M GI + T +AA ++ K VH+ G D++ VCN IS YA
Sbjct: 639 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 698
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + AE F +E + VSWN+II + ++L+ + MI+ RP+ T+
Sbjct: 699 KCGSISDAEKQF--LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 756
Query: 262 VSLLSSC 268
V +LS+C
Sbjct: 757 VGVLSAC 763
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 307/581 (52%), Gaps = 2/581 (0%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
KA+ LF+RM + +EP++ T + AC+ Q +H + K F S+ ++
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++++YAKC ++ A F + +V WN M+V + + L +F M++ I +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + + I L L + +HS I + VC+ I YAK L A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL- 548
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I + VVSW ++I G T + D +L +R M+ G R D + + +S+C +AL
Sbjct: 549 -IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+G+ +H+ GF D+ N L+++YS+CG I+ + F+ ++W A++SG+
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G+ +EALR+F M G + T S + ++ ++ GK G
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
VCNALI MY+KCGSI DA + F + K VSW +I + +G EALD F QM+
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++RPN VT + VL AC+H G ++KG YF M Y ++P+ HY C+ D+L R G L
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 847
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
A +F+Q MPIK DA +W TLL AC +H+N+EIGE+ A+ L ELEP +A YV ++N+YA+
Sbjct: 848 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 907
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+WD R MK VKK PGQS + + +F V D
Sbjct: 908 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 948
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 256/542 (47%), Gaps = 13/542 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS-DFLYSQMI 76
TI WN I+E +N + LF RM ++ PN TF + +AC S F + I
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ V ++D+Y++ +D A ++FD + +D +SW AMI G ++
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ + LF +M ++GI + A + L + + +H + +G +D VCN
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG---CTYGDKFDDSLNFYRHMIYDG 253
+S Y +L AE +F + + R V++N++I G C YG+K ++ ++ M DG
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEK---AMELFKRMHLDG 384
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T+ SL+ +C L +G+ +H++ GF + + L+++Y+KC DI++A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F V W M+ Y DL + R+F M+ VP+ T S++ C + G
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
LELG+ + + N VC+ LIDMY+K G + A ++ K VVSWTTMIA
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G +AL F QM++ +R + V + AC L++G + V +
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFS 623
Query: 494 PELNHYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+L + + L R GK++E+ L F Q+ D W L+ + N E V
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEA--GDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 553 RL 554
R+
Sbjct: 682 RM 683
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 218/462 (47%), Gaps = 3/462 (0%)
Query: 29 AVDKNEAH-KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS 87
+ KNE +A+ LF M I P F + AC K+ + +HG ++K F S
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D +V +V +Y L A +F M RD ++N +I G +Q G+ EK + LF M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
L G++ D T+ L A L + +H++ +G ++ + ++ YAKC D++
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F +E + VV WN ++ D +S +R M + P+ T S+L +
Sbjct: 442 TALDYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C+ L G +HS I F L+ V + LI MY+K G +D+A + + VSW
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
T MI+GY Q D+AL F M G D V + + +S C AL+ G+ AC
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G ++ NAL+ +YS+CG I ++ F ++W +++G +G EAL +
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
F +M + N TF + ++A + +++G ++TK
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 232/490 (47%), Gaps = 10/490 (2%)
Query: 50 IEPNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
I PN+ T ++ + C K + L + +H I+K S+ + + D Y L A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+K+FD+MP+R + +WN MI A + +V LF M + + T G+ +A
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 169 K-HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+++ +H+ ++ G+ VCN I Y++ + +A VF G+ L+ SW
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR--LKDHSSWV 257
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++I G + + +++ + M G P S+LS+C E+L G +H +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF D V N L+S+Y G++ SA +F M R V++ +I+G +Q G ++A+ LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD T+ S++ C G L G+ Y G N + AL+++Y+KC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
I A + F + VV W M+ L + + +F QM ++ PN+ T+ ++L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQSMPIK 525
+ C G LE G + +++ + N +LN Y C + D+ + GKL A D + K
Sbjct: 498 KTCIRLGDLELGE---QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 526 SDAGIWGTLL 535
D W T++
Sbjct: 555 -DVVSWTTMI 563
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N KAL FR+M I + + ACA L Q IH
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F SD+ Q +V +Y++C +++ +Y F++ D +WNA++ GF Q G E+ L
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M GI + T +AA ++ K VH+ G D++ VCN IS YA
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + AE F +E + VSWN+II + ++L+ + MI+ RP+ T+
Sbjct: 739 KCGSISDAEKQF--LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 262 VSLLSSC 268
V +LS+C
Sbjct: 797 VGVLSAC 803
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/540 (37%), Positives = 304/540 (56%), Gaps = 3/540 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +V S F+ T V+ + A K+FD+ P+ V WNA+I G++ F
Sbjct: 90 IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ ++ M+ G+ D T+ + +A L + K VH +G ++DV V N
Sbjct: 150 FGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNG 209
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAKC ++ A +VF G+++ R +VSW S+I G ++L + M +
Sbjct: 210 LVALYAKCGRVEQARIVFEGLDD--RNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD +VS+L + E L QG+ +H + G + + ++ +L +MY+KCG + AR
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSF 327
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M + W AMISGYA+ G +EA+ LF M + D +TV S I C Q G+L
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+L KW +Y +++V V ALIDM++KCGS+ ARE+F +K VV W+ MI G
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGY 447
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
L+G +A+DLF+ M + + PN VTF+ +L AC H+G +E+GW F+ M K Y +
Sbjct: 448 GLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEAR 506
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
HY+C+ DLLGR G L EA DF+ +MPI+ +WG LL ACKI+R++ +GEY A +LF
Sbjct: 507 HQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLF 566
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P + YV+++N+YA WD VA +R +M+ + K G SL+ INGK F V D
Sbjct: 567 SLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGD 626
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 215/417 (51%), Gaps = 3/417 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR N A+ ++ RM+ + + P+ T P + KAC+ + + +HG I
Sbjct: 137 WNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIF 196
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD+FVQ +V +YAKC R++ A +F+ + DR++ SW +MI G+ Q G + L
Sbjct: 197 RLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALR 256
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR ++ D++ ++ + +A + L KS+H + +G++ + + + + YA
Sbjct: 257 IFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYA 316
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A F +E + V+ WN++I G ++++ ++ MI R D TV
Sbjct: 317 KCGQVMVARSFFDQME--IPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITV 374
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S + +C +L + + + + DV V LI M++KCG +D AR +FD D
Sbjct: 375 RSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLD 434
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W+AMI GY G +A+ LF+AM+ AG P+ VT + +++ C SG +E G
Sbjct: 435 KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWEL 494
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
+ G++ ++D+ + G + +A + +P E V W ++ C +
Sbjct: 495 FHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKI 551
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 11/319 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I W S I +AL +F +M++ +++P+ + + +A + D + IH
Sbjct: 234 NIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIH 293
Query: 78 GHIVKS--PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
G +VK F D+ + T MYAKC ++ A FD+M +V WNAMI G+A+ G+
Sbjct: 294 GCVVKMGLEFEPDLLISLTA--MYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGY 351
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + LF M I+ D +TV A L L K + + DV V
Sbjct: 352 TNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTA 411
Query: 196 WISAYAKCNDLKMAELVF-RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I +AKC + +A VF R ++ + VV W+++I G + D+++ + M G
Sbjct: 412 LIDMFAKCGSVDLAREVFDRTLD---KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGV 468
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P+ T V LL++C + +G L HS +YG + ++ + + G ++ A
Sbjct: 469 CPNDVTFVGLLTACNHSGLVEEGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAY 527
Query: 314 FLFDGMCDRTRVS-WTAMI 331
M VS W A++
Sbjct: 528 DFITTMPIEPGVSVWGALL 546
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 312/565 (55%), Gaps = 6/565 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS WN I + + + L FR+ + EPN T AC L
Sbjct: 111 RSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGL 170
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG+I++S F VQ +++ MYA D ++ A +LFD+M +RDV SW+ MI G+ Q G
Sbjct: 171 KMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQTG 229
Query: 135 FLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
L LF M I+ D +T++ + +A + +S+ +SVH I G+D D+ V
Sbjct: 230 EAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVG 289
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N+ I Y+K +D + A F E R VSWNSII G +K ++L+ + M G
Sbjct: 290 NSIIDMYSKXDDHESAFKAFN--EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 347
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
FR D T+V+LL SC Q + +HS I +G++L+ VIN+LI YSKC I+ A
Sbjct: 348 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 407
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD + + VSW+AMI+G+ G DEA+ LF M A E P+ VT+LS++ S
Sbjct: 408 KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSA 467
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L+ KW GL V V A++DMY+KCG IG +R+ F +PEK +VSW MIA
Sbjct: 468 DLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIA 527
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
C +NG +AL L +M L+PN VT L+VL AC+H G +E+G +F M + + V
Sbjct: 528 ACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVE 587
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHRNIEIGEYVA 551
P L HYSCM D+L R GKL A++ ++ MP ++ AG+WG LL AC+ N +G A
Sbjct: 588 PGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAA 647
Query: 552 YRLFELEPHSAAPYVEMANIYALGG 576
R+ LEP S+A Y +++YA G
Sbjct: 648 XRVLXLEPQSSAGYFLASSMYAASG 672
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 263/532 (49%), Gaps = 20/532 (3%)
Query: 19 INQWNSQIREAVDKN--EAHKALLLFRRMKKNDIEPNNLTFPF-IAKACAKLSDFLYSQM 75
+ WN I+++ ++ ++ +A + +MKK + + T I KAC+ L + +
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP-VRHGKS 70
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++K F S + D Y K LD A +FD M RD SWN MI G G
Sbjct: 71 IHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 130
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKS---VHSFGIHIGVDADVS 191
+ L F R++ + + T++ AIHA + L ++ +H + I G S
Sbjct: 131 SDXGLWWFRQARVIAFEPNVSTLV----LAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS 186
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N+ +S YA ND++ AE +F + E R V+SW+ +IGG + +L + M
Sbjct: 187 VQNSLLSMYAD-NDMERAEELFDEMCE--RDVISWSVMIGGYVQTGEAXMALQLFLEMXS 243
Query: 252 DG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ D T+VS+L +C + GR VH I G D D+ V N++I MYSK D +
Sbjct: 244 NAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHE 303
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA F+ M R VSW ++ISG + EAL LF++M AG D VT+++++ C
Sbjct: 304 SAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCK 363
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
K+ + G + N V N+LID YSKC I A +LF L K VSW+
Sbjct: 364 YFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSA 423
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKV 489
MIAG G+ EA+ LF +M + +PN VT L++L+A + + L++ W + + +
Sbjct: 424 MIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRR- 482
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ E+ + + D+ + G++ + +P K+ WG ++ AC ++
Sbjct: 483 -GLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS-WGAMIAACGMN 532
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/605 (34%), Positives = 332/605 (54%), Gaps = 12/605 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W S + +AL LF +M+ I+PN TF + A
Sbjct: 154 RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGV 213
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H ++KS S IFV +MV+MY+K + A +FD M +R+ SWN+MI GF G
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273
Query: 135 FLEKVLCLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ LFY MRL G+ Q F TV+ L + K +S K +H I G D D++
Sbjct: 274 LDLEAFELFYRMRLEGVKLTQTIFATVIKL---CANIKEMSFAKQLHCQVIKNGSDFDLN 330
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ + AY+KC+++ A +F + G++ VVSW +II G + D ++N + M
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLF-CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G RP+ T ++L++ A V +H+ + ++ SV L YSK GD +
Sbjct: 390 EGVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANE 445
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F+ + ++ V+W+AM+SGYAQ GD++ A+++F + G P+ T S+++ C
Sbjct: 446 AAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAA 505
Query: 372 -SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ ++E GK F + + G + + V +AL+ MY+K G+I A E+F ++ +VSW +
Sbjct: 506 PTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNS 565
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
MI+G A +G ++L +F +M +L + +TF+ V+ ACTHAG + +G YF+LM K Y
Sbjct: 566 MISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDY 625
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P + HYSCM DL R G L++A+D + MP + A IW TLL AC++H N+++GE
Sbjct: 626 HIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELA 685
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
A +L L+P +A YV ++NIYA G W A +R +M +VKK G S + + KT +
Sbjct: 686 AEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFS 745
Query: 611 FTVED 615
F D
Sbjct: 746 FMAGD 750
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 264/540 (48%), Gaps = 27/540 (5%)
Query: 32 KNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
+N+ +K AL LF ++++ + + + K C L D + + +H +K F D+
Sbjct: 69 RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVS 128
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
V T++VDMY K + ++ ++FD+M ++V SW +++ G+ Q G E+ L LF M+L G
Sbjct: 129 VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG 188
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
I+ + T + + VH+ I G+D+ + V N+ ++ Y+K + A+
Sbjct: 189 IKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAK 248
Query: 211 LVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
VF +E R VSWNS+I G T G + FYR M +G + T +++ C
Sbjct: 249 AVFDSMEN--RNAVSWNSMIAGFVTNGLDLEAFELFYR-MRLEGVKLTQTIFATVIKLCA 305
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVSWT 328
+ + + +H I G D D+++ L+ YSKC +ID A LF M + VSWT
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWT 365
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG-----QSGALELGKWFDN 383
A+ISGY Q G D A+ LF M G P+ T ++++ Q AL + ++N
Sbjct: 366 AIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYEN 425
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
G AL D YSK G +A ++F + EK +V+W+ M++G A G+
Sbjct: 426 SPSVG---------TALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEG 476
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTH-AGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
A+ +F Q+ + + PN TF +VL AC +E+G + + K N L S +
Sbjct: 477 AVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNA-LCVSSAL 535
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH----RNIEIGEYVAYRLFELE 558
+ ++G ++ A + + + D W +++ H ++++I E + + EL+
Sbjct: 536 VTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELD 594
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 172/363 (47%), Gaps = 3/363 (0%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
+ +LFD+ P + ++ N ++ F++ ++ L LF +R G D ++ + +
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ K VH I G DVSV + + Y K ++ E VF E ++ VVSW
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFD--EMRVKNVVSWT 162
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
S++ G + +L + M +G +P+ T ++L A+ +G VH+ I
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS 222
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G D + V N++++MYSK + A+ +FD M +R VSW +MI+G+ G EA LF
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
+ M G ++I C + K G ++ + AL+ YSKC
Sbjct: 283 YRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKC 342
Query: 408 GSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
I DA +LF + + VVSWT +I+G NG A++LF QM +RPN T+ +
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTI 402
Query: 467 LQA 469
L A
Sbjct: 403 LTA 405
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 130/246 (52%)
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N ++ + D+ ++LN + + G D +++ +L C C + G+ VH I
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
GF DVSV +L+ MY K ++ +FD M + VSWT++++GY Q G ++AL+L
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
F M+ G P+ T +++ G GA+E G GL + V N++++MYSK
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
+ DA+ +F ++ + VSW +MIAG NG +EA +LF++M ++ + F V
Sbjct: 241 SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300
Query: 467 LQACTH 472
++ C +
Sbjct: 301 IKLCAN 306
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 326/594 (54%), Gaps = 3/594 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N IR D AL +R M ++ P+ TFP + K CA+L + HG ++K
Sbjct: 76 NVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIK 135
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
D++ ++V YAK ++ A ++FD MP RD+ +WN M+ G+ G L
Sbjct: 136 LGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALAC 195
Query: 143 FYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + +Q D V ++ A K +H + I G++ D+ V + + Y
Sbjct: 196 FQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYC 255
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A VF + LRTVV+WN +IGG ++ D++ + + M +G + +V T
Sbjct: 256 KCGEVAYARSVFATMP--LRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTA 313
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL++C E+ + GR VH + + F V + L+ MY K G ++S+ +F + +
Sbjct: 314 INLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIAN 373
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+T VSW MI+ Y K EA+ LF + PD T+ +++ G+L +
Sbjct: 374 KTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQI 433
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+Y G +N ++ NA++ MY++ G + +RE+F + K V+SW TMI G A++G+
Sbjct: 434 HSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQG 493
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL++F +M L+PN TF++VL AC+ +G +++GW +FNLM + Y + P++ HY C
Sbjct: 494 KTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGC 553
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR+G L+E L F++SMPI + +WG+LL A + +I+I EY A R+F+LE +
Sbjct: 554 MTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDN 613
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y+ ++++YA GRW+ V +R +MK +++ SLV ++ C+F D
Sbjct: 614 TGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGD 667
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 208/449 (46%), Gaps = 25/449 (5%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
R+D A + + D N MI GFA G L + M G + D T + +
Sbjct: 56 RMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVK 115
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
L ++ H I +G++ DV CN+ ++ YAK ++ AE VF G+ +R +
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP--VRDI 173
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF--RPDVTTVVSLLSSCVCPEALVQGRLVH 281
V+WN+++ G +L ++ M +D + D +++ L++C + +QG+ +H
Sbjct: 174 VTWNTMVDGYVSNGLGSLALACFQEM-HDALEVQHDSVGIIAALAACCLEVSSMQGKEIH 232
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ I +G + D+ V +L+ MY KCG++ AR +F M RT V+W MI GYA D
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EA F M A G ++VT +++++ C Q+ + G+ Y +V++ AL+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
+MY K G + + ++F + KT+VSW MIA + EA+ LF +++ L P+
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412
Query: 462 TFLAVLQACTHAGFLEK---------GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
T V+ A G L G GY +N L+ Y+ R G +
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAE---NTLIMNAVLHMYA-------RSGDV 462
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + M + D W T++ IH
Sbjct: 463 VASREIFDKM-VSKDVISWNTMIMGYAIH 490
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 153/329 (46%), Gaps = 6/329 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN I +A F +M+ ++ +T + ACA+ LY + +H
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVH 333
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G++V+ F + ++T +++MY K +++ + K+F K+ ++ + SWN MI +
Sbjct: 334 GYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYT 393
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF + + D+ T+ + A + L + +HS+ I +G + + N +
Sbjct: 394 EAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVL 453
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YA+ D+ + +F + + V+SWN++I G + +L + M Y+G +P+
Sbjct: 454 HMYARSGDVVASREIFDKMVS--KDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPN 511
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGI--HYGFDLDVSVINTLISMYSKCGDIDSARFL 315
+T VS+L++C LV +H + + YG + + + + GD+
Sbjct: 512 ESTFVSVLTACSV-SGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQF 570
Query: 316 FDGM-CDRTRVSWTAMISGYAQKGDLDEA 343
+ M D T W ++++ + D+D A
Sbjct: 571 IESMPIDPTSRVWGSLLTASRNQNDIDIA 599
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ WN+ I + K +A+ LF + + P+ T + A L + +
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQ 432
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +I+ + + + ++ MYA+ + + ++FDKM +DV SWN MI+G+A G
Sbjct: 433 IHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQ 492
Query: 136 LEKVLCLFYNMRLVGIQAD---FVTVM 159
+ L +F M+ G+Q + FV+V+
Sbjct: 493 GKTALEMFDEMKYNGLQPNESTFVSVL 519
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + +A E A+ MI G A G AL + M+E RP+R TF V+
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQSMPIK 525
+ C G L++G ++ K + E + Y+C + + G +++A MP++
Sbjct: 115 KCCARLGGLDEGRAAHGMVIK---LGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR 171
Query: 526 SDAGIWGTLL 535
D W T++
Sbjct: 172 -DIVTWNTMV 180
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/596 (34%), Positives = 329/596 (55%), Gaps = 6/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ V + +A+ LF M + I+PN + + AC L D ++IHG+++
Sbjct: 226 WNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI 285
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + D F +VDMYAK L A +F+K+ D+ SWNA+I G E+ L
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M+ GI + T+ +A L + +HS + + +++D+ V + Y+
Sbjct: 346 LLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYS 405
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD--SLNFYRHMIYDGFRPDVT 259
KC+ L+ A + F + E + +++WN+II G Y ++D +L+ + M +G + T
Sbjct: 406 KCDLLEDARMAFNLLPE--KDLIAWNAIISG--YSQYWEDMEALSLFVEMHKEGIGFNQT 461
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ ++L S + + R VH + GF D+ V+N+LI Y KC ++ A +F+
Sbjct: 462 TLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 521
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
VS+T+MI+ YAQ G +EAL+LF M+ PD S+++ C A E GK
Sbjct: 522 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGK 581
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ G ++ N+L++MY+KCGSI DA F L E+ +VSW+ MI G A +G
Sbjct: 582 QLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHG 641
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+AL LF+QM++ + PN +T ++VL AC HAG + + YF M +++ P HY
Sbjct: 642 HGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHY 701
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLLGR GK+ EA++ V MP +++A +WG LL A +IH+++E+G A LF LEP
Sbjct: 702 ACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEP 761
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +V +ANIYA G+W+ VA +R +M+ ++VKK PG S + + K TF V D
Sbjct: 762 EKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGD 817
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 234/458 (51%), Gaps = 2/458 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I AL+ F M ++ N TF + KAC+ + D + +HG +V
Sbjct: 125 WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVV 184
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F D+FV T+V MYAKCD + +LFD++P+R+V SWNA+ + Q+ F + +
Sbjct: 185 VSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVG 244
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LFY M L GI+ + ++ + A + S K +H + I +G D D N + YA
Sbjct: 245 LFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA 304
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K DL A VF I++ +VSWN++I GC + + +L M G P++ T+
Sbjct: 305 KVGDLADAISVFEKIKQ--PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTL 362
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L +C GR +HS + + D+ V L+ MYSKC ++ AR F+ + +
Sbjct: 363 SSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE 422
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ ++W A+ISGY+Q + EAL LF M G + T+ +++ + + +
Sbjct: 423 KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 482
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G ++ V N+LID Y KC + DA +F +VS+T+MI A G+
Sbjct: 483 HGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQG 542
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EAL LF +M +++L+P+R ++L AC + E+G
Sbjct: 543 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG 580
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 253/530 (47%), Gaps = 41/530 (7%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
+ K + P ++++ + C IH HI KS D ++ ++++Y+KC
Sbjct: 47 IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRN 106
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
A KL D+ + D+ SW+A+I G+AQ G L F+ M L+G++ + T + +A
Sbjct: 107 FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKA 166
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
K L + K VH + G + DV V NT + YAKC++ ++ +F I E R VV
Sbjct: 167 CSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE--RNVV 224
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SWN++ D +++ + M+ G +P+ ++ S++++C +G+++H +
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL 284
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
I G+D D N L+ MY+K GD+ A +F+ + VSW A+I+G ++AL
Sbjct: 285 IKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQAL 344
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
L M+ +G P++ T+ S + C G ELG+ + ++ ++ V L+DMY
Sbjct: 345 ELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMY 404
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF- 463
SKC + DAR F LPEK +++W +I+G + E +EAL LF +M + + N+ T
Sbjct: 405 SKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLS 464
Query: 464 --------LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY---------------- 499
L V+ C L G+ + +Y VN ++ Y
Sbjct: 465 TILKSTAGLQVVHVCRQVHGLSVKSGFH---SDIYVVNSLIDSYGKCSHVEDAERIFEEC 521
Query: 500 --------SCMADLLGRKGKLKEALDF---VQSMPIKSDAGIWGTLLCAC 538
+ M + G+ +EAL +Q M +K D + +LL AC
Sbjct: 522 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 571
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 228/452 (50%), Gaps = 15/452 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ I WN+ I V +AL L +MK++ I PN T KACA + +
Sbjct: 320 KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGR 379
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H ++K SD+FV +VDMY+KCD L+ A F+ +P++D+ +WNA+I G++Q
Sbjct: 380 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 439
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L LF M GI + T+ + ++ + + + + VH + G +D+ V N
Sbjct: 440 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 499
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I +Y KC+ ++ AE +F E + +VS+ S+I + +++L + M
Sbjct: 500 SLIDSYGKCSHVEDAERIFE--ECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMEL 557
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD SLL++C A QG+ +H H + YGF LD+ N+L++MY+KCG ID A
Sbjct: 558 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 617
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F + +R VSW+AMI G AQ G +AL+LF M G P+ +T++S++ C +G
Sbjct: 618 AFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGL 677
Query: 375 LELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMI 432
+ K +F++ G K +ID+ + G I +A EL +P E W ++
Sbjct: 678 VTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL 737
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+ H+ +EL R + F+
Sbjct: 738 GAARI-----------HKDVELGRRAAEMLFI 758
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/593 (36%), Positives = 328/593 (55%), Gaps = 9/593 (1%)
Query: 22 WNSQIREAVDKNEAHKAL-LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V +A+ ++ + + + TFP + KAC L D + IH +
Sbjct: 142 WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWV 198
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K F D+FV +++ MY++ + A LFD MP RD+ SWNAMI G Q G + L
Sbjct: 199 FKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 258
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+ MRL GI D VTV + +S +H + I G++ ++ V N I+ Y
Sbjct: 259 DVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMY 318
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK +L A+ VF+ + LR VVSWNSII D + F+ M +G PD+ T
Sbjct: 319 AKFGNLGDAQKVFQ--QMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT 376
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI-NTLISMYSKCGDIDSARFLFDGM 319
+VSL S R VH + G+ ++ VI N ++ MY+K G IDSA +F+ +
Sbjct: 377 LVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLI 436
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELG 378
+ VSW +ISGY Q G EA+ ++ ME E+ + T +S+++ GAL+ G
Sbjct: 437 PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQG 496
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ L +V V LID+Y KCG + DA LFY +P ++ V W +I+ ++
Sbjct: 497 MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIH 556
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +AL LF +M + ++P+ VTF+++L AC+H+G +++G +F+LM + Y + P L H
Sbjct: 557 GHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKH 615
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM DLLGR G L+ A DF++ MP+ DA IWG LL AC+IH NIE+G++ + RLFE++
Sbjct: 616 YGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVD 675
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+ YV ++NIYA G+W+GV +R++ + +KK PG S + +N + F
Sbjct: 676 SENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIF 728
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/529 (28%), Positives = 265/529 (50%), Gaps = 26/529 (4%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
+R+ KN+ + F + +C K L ++ +H +V S F+ +V++YA
Sbjct: 68 WRQPAKNE----EIDFNSLFDSCTKT---LLAKRLHALLVVSGKIQSNFISIRLVNLYAS 120
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFVTVMG 160
+ + FD++ +DV +WN+MI + + G + + FY + LV QADF T
Sbjct: 121 LGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPP 180
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ +A + L + +H + +G DV V + I Y++ + +A +F +
Sbjct: 181 VLKA---CQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP--F 235
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R + SWN++I G +L+ M +G D TV S+L C + L+
Sbjct: 236 RDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLI 295
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + I +G + ++ V N LI+MY+K G++ A+ +F M R VSW ++I+ Y Q D
Sbjct: 296 HLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDP 355
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNA 399
A FF M+ G PDL+T++S+ S QS + + + G L + V++ NA
Sbjct: 356 VTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNA 415
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME-LDLRP 458
++DMY+K G I A ++F +P K VVSW T+I+G NG EA++++ M E +++
Sbjct: 416 VMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKL 475
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEAL 516
N+ T++++L A H G L++G + + + N L+ + +C+ DL G+ G+L +A+
Sbjct: 476 NQGTWVSILAAYAHVGALQQG---MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAM 532
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF-ELEPHSAAP 564
+P +S W ++ IH + E A +LF E++ P
Sbjct: 533 CLFYQVPRESSVP-WNAIISCHGIHGHGE----KALKLFREMQDEGVKP 576
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 211/424 (49%), Gaps = 5/424 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ I + A +AL + M+ I +++T I CA+L D + +IH
Sbjct: 238 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHL 297
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++K ++FV +++MYAK L A K+F +M RDV SWN++I + Q
Sbjct: 298 YVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVT 357
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 197
F+ M+L G++ D +T++ L A ++ +SVH F + G + V + N +
Sbjct: 358 ARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVM 417
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY-DGFRP 256
YAK + A VF I ++ VVSWN++I G T +++ YR M +
Sbjct: 418 DMYAKLGVIDSAHKVFNLIP--VKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKL 475
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T VS+L++ AL QG +H H I LDV V LI +Y KCG + A LF
Sbjct: 476 NQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLF 535
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + V W A+IS + G ++AL+LF M+ G PD VT +S++S C SG ++
Sbjct: 536 YQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVD 595
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
GKWF + G+K ++ ++D+ + G + A + +P S W ++ C
Sbjct: 596 EGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGAC 655
Query: 436 ALNG 439
++G
Sbjct: 656 RIHG 659
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/609 (35%), Positives = 326/609 (53%), Gaps = 6/609 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N + RS WN I +D L F + EPN T + +AC L
Sbjct: 105 FNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGT 164
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
++HG+++KS FW+ VQ +++ MY D ++CA +LFD+M ++DV +W+ MI G
Sbjct: 165 KHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGG 223
Query: 130 FAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ Q + L +F M LV GI+ D V ++ + +A ++ + + VH IH G D
Sbjct: 224 YLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDC 283
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
D+ V N+ I Y+KC D A VF I + R VSWNS++ G + + ++ +
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQ--RNNVSWNSMLSGFVLNENYSEAQSLISS 341
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M + D T+V++L C + +H I G + + V++ LI Y+KC
Sbjct: 342 MRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYL 401
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
I+ A +F M R VSW+ MISG+A G DEA+ ++ M+ P+++T+++++
Sbjct: 402 IEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEA 461
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C + L+ KW A G V V A++DMYSKCG I +R F L K +V+W
Sbjct: 462 CSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTW 521
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ MIA +NG EAL LF +M L+PN VT L+VL AC+H G +E+G F M +
Sbjct: 522 SAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQ 581
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHRNIEI 546
+ P HYSCM D+LGR GKL A++ +++MP +K+ A IWG+LL AC+ + E+
Sbjct: 582 ELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTEL 641
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
G+ R+ ELEP ++A Y+ +++YA G WD A +R + K VK G SLVHI+
Sbjct: 642 GKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDN 701
Query: 607 KTCTFTVED 615
K C F D
Sbjct: 702 KACRFVAGD 710
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 176/360 (48%), Gaps = 8/360 (2%)
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
K+P+ W I + G ++V+ ++ ++ GIQ V+V A
Sbjct: 11 KLPN-----WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRH 65
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
KS+H+ I G D+ S+ N+ + Y +C D +A VF + R VSWN +I G
Sbjct: 66 GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRS-RDSVSWNILIHGH 124
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
L ++ + GF P+++T+V ++ +C G ++H + I GF
Sbjct: 125 LDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAIS 184
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME-A 352
SV N+L+SMY D++ AR LFD M ++ ++W+ MI GY Q + L++F M
Sbjct: 185 SVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLV 243
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G PD V ++S++ C S + G+ G ++ V N+LIDMYSKC G
Sbjct: 244 PGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGS 303
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A ++F + ++ VSW +M++G LN + EA L M + + + VT + +LQ C +
Sbjct: 304 AFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 325/595 (54%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR VD A+ + RM+ + +N T+PF+ KAC L D + +HG ++
Sbjct: 94 WNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVI 153
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS DI++ +++ MYAK ++ A +F +MP RD+ SWN+MI G+ +G + L
Sbjct: 154 KSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLS 213
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ GI+ D +V+G+ A L K +H + ++ DV V + + YA
Sbjct: 214 CFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYA 273
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTT 260
KC + AE +F I + +++V+WN++IGG + + +S + R M G PD T
Sbjct: 274 KCGRMDYAERLFDQITD--KSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWIT 331
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++LL C EA++ G+ VH I GF + + L+ MY +CG + A LF M
Sbjct: 332 MINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMN 391
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R +SW AMI+ Y + G+ +A+ LF + PD T+ S++ + +L +
Sbjct: 392 ERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQ 451
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y L N V N+++ MY KCG++ ARE+F + K V+SW T+I A++G
Sbjct: 452 IHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGF 511
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+++LF +M E PN TF+++L +C+ AG + +GW YFN M + Y +NP + HY
Sbjct: 512 GRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYG 571
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DL+GR G L A +F++ MP+ A IWG+LL A + ++E+ E A + LE
Sbjct: 572 CILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHD 631
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++N+YA GRW+ V ++ MK+ ++K G S+V ++ KT F +D
Sbjct: 632 NTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQD 686
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 234/475 (49%), Gaps = 9/475 (1%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
T + Y + + A LF+ M D WN MI GF G + ++ M G++
Sbjct: 64 TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T + +A L+ + VH I G+D D+ + N+ I YAK ++ AE+V
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183
Query: 213 FRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
FR E +R +VSWNS+I G + GD + SL+ +R M G + D +V+ +L +C
Sbjct: 184 FR--EMPVRDLVSWNSMISGYVSVGDGW-RSLSCFREMQASGIKLDRFSVIGILGACSLE 240
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
L G+ +H + +LDV V +L+ MY+KCG +D A LFD + D++ V+W AMI
Sbjct: 241 GFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMI 300
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
GY+ E+ M+ G++ PD +T+++++ C Q A+ LGK +A G
Sbjct: 301 GGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGF 360
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
++++ AL+DMY +CG + A LF + E+ ++SW MIA NGE +A+ LF
Sbjct: 361 LPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQD 420
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
+ L+P+ T ++L A L + +TK+ +++ + + + G+ G
Sbjct: 421 LCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKL-KLDSNTFVSNSIVFMYGKCG 479
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIH--RNIEIGEYVAYRLFELEPHSAA 563
L A + M K D W T++ A IH I I + R EP+ +
Sbjct: 480 NLLRAREIFDRMTFK-DVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGST 533
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/609 (35%), Positives = 326/609 (53%), Gaps = 6/609 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N + RS WN I +D L F + EPN T + +AC L
Sbjct: 105 FNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGT 164
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
++HG+++KS FW+ VQ +++ MY D ++CA +LFD+M ++DV +W+ MI G
Sbjct: 165 KHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGG 223
Query: 130 FAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ Q + L +F M LV GI+ D V ++ + +A ++ + + VH IH G D
Sbjct: 224 YLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDC 283
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
D+ V N+ I Y+KC D A VF I + R VSWNS++ G + + ++ +
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQ--RNNVSWNSMLSGFVLNENYSEAQSLISS 341
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M + D T+V++L C + +H I G + + V++ LI Y+KC
Sbjct: 342 MRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYL 401
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
I+ A +F M R VSW+ MISG+A G DEA+ ++ M+ P+++T+++++
Sbjct: 402 IEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEA 461
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C + L+ KW A G V V A++DMYSKCG I +R F L K +V+W
Sbjct: 462 CSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTW 521
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ MIA +NG EAL LF +M L+PN VT L+VL AC+H G +E+G F M +
Sbjct: 522 SAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQ 581
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHRNIEI 546
+ P HYSCM D+LGR GKL A++ +++MP +K+ A IWG+LL AC+ + E+
Sbjct: 582 ELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTEL 641
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
G+ R+ ELEP ++A Y+ +++YA G WD A +R + K VK G SLVHI+
Sbjct: 642 GKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDN 701
Query: 607 KTCTFTVED 615
K C F D
Sbjct: 702 KACRFVAGD 710
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 176/360 (48%), Gaps = 8/360 (2%)
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
K+P+ W I + G ++V+ ++ ++ GIQ V+V A
Sbjct: 11 KLPN-----WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRH 65
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
KS+H+ I G D+ S+ N+ + Y +C D +A VF + R VSWN +I G
Sbjct: 66 GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRS-RDSVSWNILIHGH 124
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
L ++ + GF P+++T+V ++ +C G ++H + I GF
Sbjct: 125 LDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAIS 184
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME-A 352
SV N+L+SMY D++ AR LFD M ++ ++W+ MI GY Q + L++F M
Sbjct: 185 SVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLV 243
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G PD V ++S++ C S + G+ G ++ V N+LIDMYSKC G
Sbjct: 244 PGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGS 303
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A ++F + ++ VSW +M++G LN + EA L M + + + VT + +LQ C +
Sbjct: 304 AFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 320/581 (55%), Gaps = 6/581 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A LFR M+ + + T + + C+ L +MIHG +VK+ F ++FV T +V
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 204
Query: 97 DMYAKCDRLDCAYKLFDKMP--DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
DMYAKC + A LF + ++ W AM+ G+AQ G K + F M G++ +
Sbjct: 205 DMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECN 264
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + A + VH F + G ++V V + + YAKC DLK A+ +
Sbjct: 265 QYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLE 324
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+E+ VVSWNS++ G +++L +++M + D T S+L+ CV
Sbjct: 325 TMEDD--DVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGS-- 380
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+ + VH I GF+ V N L+ MY+K GD+D A +F+ M ++ +SWT++++GY
Sbjct: 381 INPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGY 440
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
AQ +E+L++F M G PD V S++S C + LE GK GL+ +
Sbjct: 441 AQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQ 500
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V N+L+ MY+KCG + DA +F ++ K V++WT +I G A NG+ +L + M+
Sbjct: 501 SVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSS 560
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
RP+ +TF+ +L AC+HAG +++G YF M KVY + P HY+CM DL GR GKL E
Sbjct: 561 GTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDE 620
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
A + M +K DA +W +LL AC++H N+E+ E A LFELEP +A PYV ++N+Y+
Sbjct: 621 AKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSA 680
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+W+ VA +R +MK + K PG S + IN + TF +D
Sbjct: 681 SRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDD 721
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 150/497 (30%), Positives = 246/497 (49%), Gaps = 31/497 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + + +KA+ FR M +E N TFP I AC+ + + + +HG IV
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F S+++VQ+ +VDMYAKC L A + + M D DV SWN+++VGF + G E+ L
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF NM ++ D T + + KSVH I G + V N + YA
Sbjct: 353 LFKNMHGRNMKIDDYTFPSVLNCCVVGSINP--KSVHGLIIKTGFENYKLVSNALVDMYA 410
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K D+ A VF + E + V+SW S++ G + ++SL + M G PD V
Sbjct: 411 KTGDMDCAYTVFEKMLE--KDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIV 468
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C L G+ VH I G SV N+L++MY+KCG +D A +F M
Sbjct: 469 ASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV 528
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
+ ++WTA+I GYAQ G +L+ + AM ++G PD +T + ++ C +G ++ G K+
Sbjct: 529 KDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKY 588
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIAGCAL 437
F G+K +ID++ + G + +A++L + P+ TV W ++++ C +
Sbjct: 589 FQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATV--WKSLLSACRV 646
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
H+ +EL R T L L+ ++ +++ +Y + + N
Sbjct: 647 -----------HENLELAERA--ATNLFELEPMNAMPYV--------MLSNMYSASRKWN 685
Query: 498 HYSCMADLLGRKGKLKE 514
+ + L+ KG +KE
Sbjct: 686 DVAKIRKLMKSKGIVKE 702
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 202/432 (46%), Gaps = 33/432 (7%)
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI----------- 127
H + + I+ +++ +K +++ A KLFDKMP +D SWN MI
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114
Query: 128 --------------------VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
G+ + G + LF +MRL G +A T+ + +
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + +H F + G + +V V + YAKC + AE +F+G+E + V W
Sbjct: 175 LGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+++ G ++ F+R+M G + T ++L++C A G VH +
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS 294
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF +V V + L+ MY+KCGD+ +A+ + + M D VSW +++ G+ + G +EALRLF
Sbjct: 295 GFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLF 354
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M D T S+++ C G++ K G ++ +V NAL+DMY+K
Sbjct: 355 KNMHGRNMKIDDYTFPSVLN-CCVVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKT 412
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + A +F + EK V+SWT+++ G A N E+L +F M + P++ ++L
Sbjct: 413 GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASIL 472
Query: 468 QACTHAGFLEKG 479
AC LE G
Sbjct: 473 SACAELTLLEFG 484
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 117/283 (41%), Gaps = 57/283 (20%)
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL---------------- 340
N L++ SK G ++ AR LFD M + SW MIS Y G L
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 341 ---------------DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
EA LF +M G T+ S++ C G ++ G+ +
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALNGEFVE 443
G + NV V L+DMY+KC + +A LF L K V WT M+ G A NG+ +
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 248
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEKGWGYFNLMTKVYQV 492
A++ F M + N+ TF +L AC+ H ++ G+G + VY
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFG-----SNVYV- 302
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
S + D+ + G LK A + +++M D W +L+
Sbjct: 303 ------QSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLM 338
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 311/576 (53%), Gaps = 1/576 (0%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
F M+ I P+ + I + C L M+H IV F S FV T +++MYA
Sbjct: 158 FFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYA 217
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
K ++ +YK+F+ M + +V SWNAMI GF LF M G+ D T +G
Sbjct: 218 KLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIG 277
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ +A + ++ K V + + +GVD++ V I +KC L+ A +F
Sbjct: 278 VAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITC 337
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R WN++I G + +L + M + D T S+ ++ + L G+ V
Sbjct: 338 RFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKV 397
Query: 281 HSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
H+ I G +++ VS+ N + + Y+KCG ++ R +F+ M DR +SWT++++ Y+Q +
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSE 457
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
D+A+ +F M A G P+ T S++ C LE G+ C GL + + +A
Sbjct: 458 WDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESA 517
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+DMY+KCG +GDA+++F + VSWT +IAG A +G +AL LF +M++L + PN
Sbjct: 518 LVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPN 577
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VTFL VL AC+H G +E+G YF LM K Y + PE+ HY+C+ DLL R G L +A++F+
Sbjct: 578 AVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFI 637
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
MP++ + +W TLL AC++H N+E+GE A ++ + ++A YV ++N Y G +
Sbjct: 638 SRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYK 697
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+LR +MK VKK PG S + +NG F D
Sbjct: 698 DGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGD 733
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 242/485 (49%), Gaps = 11/485 (2%)
Query: 12 KIYRSST---INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
K++ + T + WN+ I + A LF RM + P+ TF +AKA L
Sbjct: 227 KVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLR 286
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAM 126
D ++ + G+ ++ S+ V T ++DM +KC L A +F+ + R A WNAM
Sbjct: 287 DVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAM 346
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I G+ + GF EK L LF M I D T + A K LSL K VH+ I G+
Sbjct: 347 ISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGL 406
Query: 187 DAD-VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+ + VS+ N +AYAKC L+ VF +E+ R ++SW S++ + ++D ++
Sbjct: 407 EVNYVSISNAVANAYAKCGSLEDVRKVFNRMED--RDLISWTSLVTAYSQCSEWDKAIEI 464
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ +M +G P+ T S+L SC L G+ VH G D+D + + L+ MY+K
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAK 524
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG + A+ +F+ + + VSWTA+I+G+AQ G +D+AL+LF M G P+ VT L +
Sbjct: 525 CGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCV 584
Query: 366 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 423
+ C G +E G ++F + GL + ++D+ S+ G + DA E +P E
Sbjct: 585 LFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEP 644
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
+ W T++ C ++G VE +L Q + N T++ + +G + G
Sbjct: 645 NEMVWQTLLGACRVHGN-VELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLR 703
Query: 484 NLMTK 488
+LM +
Sbjct: 704 HLMKE 708
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 238/496 (47%), Gaps = 11/496 (2%)
Query: 73 SQMIHGHIVKSPFWS--DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++ +HG ++KS F + + + + Y+KC +D A +LFD+M R+ SW +I G
Sbjct: 87 AKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGL 146
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A+ G F M+ GI D G+ Q I + L VH+ + G +
Sbjct: 147 AENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHT 206
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V ++ YAK +++ + VF + E VVSWN++I G T D + D+ + + M+
Sbjct: 207 FVSTALLNMYAKLQEIEDSYKVFNTMTE--VNVVSWNAMITGFTSNDLYLDAFDLFLRMM 264
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G PD T + + + + + + V + + G D + V LI M SKCG +
Sbjct: 265 GEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQ 324
Query: 311 SARFLFDG--MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
AR +F+ + R W AMISGY + G ++AL LF M D T S+ +
Sbjct: 325 EARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNA 384
Query: 369 CGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
L LGK A GL+ N V + NA+ + Y+KCGS+ D R++F + ++ ++S
Sbjct: 385 IAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLIS 444
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT+++ + E+ +A+++F M + PN+ TF +VL +C + LE G ++
Sbjct: 445 WTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIIC 504
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
KV ++ + S + D+ + G L +A + +D W ++ H ++
Sbjct: 505 KV-GLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDA 562
Query: 548 EYVAYRLFEL--EPHS 561
+ R+ +L EP++
Sbjct: 563 LQLFRRMVQLGVEPNA 578
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 149/316 (47%), Gaps = 6/316 (1%)
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC--NTWISAYAKCNDLKMAELVFRG 215
++ L + + A+ L K+VH F + S+ N AY+KC+D+ A +F
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ + R SW +I G F D F+ M G PD +L C+ +++
Sbjct: 131 MSQ--RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G +VH+ + GF V L++MY+K +I+ + +F+ M + VSW AMI+G+
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+A LF M G PD T + + G + K YA G+ N +
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL 308
Query: 396 VCNALIDMYSKCGSIGDARELF--YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V ALIDM SKCGS+ +AR +F + + + W MI+G +G +AL+LF +M +
Sbjct: 309 VGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ 368
Query: 454 LDLRPNRVTFLAVLQA 469
D+ + T+ +V A
Sbjct: 369 NDIYLDHYTYCSVFNA 384
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI--NTLISMYSKCGDIDSARFL 315
+ +V LL CV L Q + VH + F S++ N + YSKC DID+A L
Sbjct: 68 IQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRL 127
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M R SWT +I+G A+ G + F M++ G PD ++ C ++
Sbjct: 128 FDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSI 187
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
ELG G + V AL++MY+K I D+ ++F + E VVSW MI G
Sbjct: 188 ELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGF 247
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
N +++A DLF +MM + P+ TF+ V +A
Sbjct: 248 TSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/594 (34%), Positives = 319/594 (53%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN +R V + A+ F M+ + N++T+ I CA +F +HG ++
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F D V T+V MY+KC L A KLF+ MP D +WN +I G+ Q GF ++
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G++ D VT + + + L K VHS+ + V DV + + I Y
Sbjct: 301 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYF 360
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K D++MA +F+ + L V ++I G D++N +R +I +G + T+
Sbjct: 361 KGGDVEMARKIFQ--QNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTM 418
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C AL G+ +H H + + V+V + + MY+KCG +D A F M D
Sbjct: 419 ASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSD 478
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V W +MIS ++Q G + A+ LF M +G D V++ S +S AL GK
Sbjct: 479 RDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEM 538
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y + V + LIDMYSKCG++ A +F + K VSW ++IA +G
Sbjct: 539 HGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCP 598
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E LDL+H+M+ + P+ VTFL ++ AC HAG +++G YF+ MT+ Y + + HY+C
Sbjct: 599 RECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYAC 658
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL GR G++ EA D ++SMP DAG+WGTLL AC++H N+E+ + + L EL+P +
Sbjct: 659 MVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKN 718
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++N++A G W V +R++MK V+K PG S + +NG T F+ D
Sbjct: 719 SGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAAD 772
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 206/430 (47%), Gaps = 2/430 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR ALL + +M +++ P+ TFP++ KAC L++ ++H
Sbjct: 80 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTAR 139
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F D+F + ++ +YA + A ++FD++P RD WN M+ G+ + G + +
Sbjct: 140 SLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIG 199
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F MR + VT + + +H I G + D V NT ++ Y+
Sbjct: 200 TFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYS 259
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L A +F + + V+WN +I G D++ + MI G +PD T
Sbjct: 260 KCGNLLYARKLFNTMPQ--TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 317
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L S + +L + VHS+ + + DV + + LI +Y K GD++ AR +F
Sbjct: 318 ASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNIL 377
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
TAMISGY G +A+ F + G V + +T+ S++ C AL+ GK
Sbjct: 378 VDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKEL 437
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ L++ V V +A+ DMY+KCG + A E F + ++ V W +MI+ + NG+
Sbjct: 438 HCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKP 497
Query: 442 VEALDLFHQM 451
A+DLF QM
Sbjct: 498 EIAIDLFRQM 507
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 227/486 (46%), Gaps = 6/486 (1%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+AC+ S ++ +H ++ + ++ +Y C R A LF ++ R
Sbjct: 19 RACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYAL 78
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
WN MI G +G+ + L ++ M + D T + +A ++ L VH
Sbjct: 79 PWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTA 138
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+G D+ + I YA ++ A VF E LR + WN ++ G FD+
Sbjct: 139 RSLGFHVDLFAGSALIKLYADNGYIRDARRVFD--ELPLRDTILWNVMLRGYVKSGDFDN 196
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
++ + M + T +LS C G +H I GF+ D V NTL++
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKCG++ AR LF+ M V+W +I+GY Q G DEA LF AM +AG PD VT
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S + +SG+L K +Y + +V + +ALID+Y K G + AR++F
Sbjct: 317 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNI 376
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
V T MI+G L+G ++A++ F +++ + N +T +VL AC L+ G
Sbjct: 377 LVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKE 436
Query: 482 -YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
+ +++ K ++ +N S + D+ + G+L A +F + M + D+ W +++ +
Sbjct: 437 LHCHILKK--RLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDR-DSVCWNSMISSFSQ 493
Query: 541 HRNIEI 546
+ EI
Sbjct: 494 NGKPEI 499
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 4/279 (1%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T + SL +C + Q R VH+ I G + + ++ +Y CG A LF
Sbjct: 11 TTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFF 70
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R + W MI G G D AL +F M + PD T +I CG + L
Sbjct: 71 ELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL 130
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
+ A S G ++ +ALI +Y+ G I DAR +F LP + + W M+ G
Sbjct: 131 CMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVK 190
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPEL 496
+G+F A+ F +M N VT+ +L C G G L+ ++ +P++
Sbjct: 191 SGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQV 250
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + + + G L A +MP ++D W L+
Sbjct: 251 A--NTLVAMYSKCGNLLYARKLFNTMP-QTDTVTWNGLI 286
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 326/594 (54%), Gaps = 3/594 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N IR D AL +R M ++ P+ TFP + K CA+L + HG ++K
Sbjct: 76 NVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIK 135
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
D++ ++V YAK ++ A ++FD MP RD+ +WN M+ G+ G L
Sbjct: 136 LGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALAC 195
Query: 143 FYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + +Q D V ++ A K +H + I G++ D+ V + + Y
Sbjct: 196 FQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYC 255
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A VF + LRTVV+WN +IGG ++ D++ + + M +G + +V T
Sbjct: 256 KCGEVAYARSVFATMP--LRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTA 313
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL++C E+ + GR VH + + F V + L+ MY K G ++S+ +F + +
Sbjct: 314 INLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIAN 373
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+T VSW MI+ Y K EA+ LF + PD T+ +++ G+L +
Sbjct: 374 KTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQI 433
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+Y G +N ++ NA++ MY++ G + +RE+F + K V+SW TMI G A++G+
Sbjct: 434 HSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQG 493
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL++F +M L+PN TF++VL AC+ +G +++GW +FNLM + Y + P++ HY C
Sbjct: 494 KTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGC 553
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR+G L+E L F++SMPI + +WG+LL A + +I+I EY A R+F+LE +
Sbjct: 554 MTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDN 613
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y+ ++++YA GRW+ V +R +MK +++ SLV ++ C+F D
Sbjct: 614 TGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGD 667
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 207/449 (46%), Gaps = 25/449 (5%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
R+D A + + D N MI GFA G L + M G + D T + +
Sbjct: 56 RMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVK 115
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
L ++ H I +G++ DV CN+ ++ YAK ++ AE VF G+ +R +
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP--VRDI 173
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF--RPDVTTVVSLLSSCVCPEALVQGRLVH 281
V+WN ++ G +L ++ M +D + D +++ L++C + +QG+ +H
Sbjct: 174 VTWNIMVDGYVSNGLGSLALACFQEM-HDALEVQHDSVGIIAALAACCLEFSSMQGKEIH 232
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ I +G + D+ V +L+ MY KCG++ AR +F M RT V+W MI GYA D
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EA F M A G ++VT +++++ C Q+ + G+ Y +V++ AL+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
+MY K G + + ++F + KT+VSW MIA + EA+ LF +++ L P+
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412
Query: 462 TFLAVLQACTHAGFLEK---------GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
T V+ A G L G GY +N L+ Y+ R G +
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAE---NTLIMNAVLHMYA-------RSGDV 462
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + M + D W T++ IH
Sbjct: 463 VASREIFDKM-VSKDVISWNTMIMGYAIH 490
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 153/329 (46%), Gaps = 6/329 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN I +A F +M+ ++ +T + ACA+ LY + +H
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVH 333
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G++V+ F + ++T +++MY K +++ + K+F K+ ++ + SWN MI +
Sbjct: 334 GYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYT 393
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF + + D+ T+ + A + L + +HS+ I +G + + N +
Sbjct: 394 EAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVL 453
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YA+ D+ + +F + + V+SWN++I G + +L + M Y+G +P+
Sbjct: 454 HMYARSGDVVASREIFDKMVS--KDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPN 511
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGI--HYGFDLDVSVINTLISMYSKCGDIDSARFL 315
+T VS+L++C LV +H + + YG + + + + GD+
Sbjct: 512 ESTFVSVLTACSV-SGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQF 570
Query: 316 FDGM-CDRTRVSWTAMISGYAQKGDLDEA 343
+ M D T W ++++ + D+D A
Sbjct: 571 IESMPIDPTSRVWGSLLTASRNQNDIDIA 599
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ WN+ I + K +A+ LF + + P+ T + A L + +
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQ 432
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +I+ + + + ++ MYA+ + + ++FDKM +DV SWN MI+G+A G
Sbjct: 433 IHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQ 492
Query: 136 LEKVLCLFYNMRLVGIQAD---FVTVM 159
+ L +F M+ G+Q + FV+V+
Sbjct: 493 GKTALEMFDEMKYNGLQPNESTFVSVL 519
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 311/576 (53%), Gaps = 1/576 (0%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
F M+ I P+ + I + C L M+H IV F S FV T +++MYA
Sbjct: 158 FFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYA 217
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
K ++ +YK+F+ M + +V SWNAMI GF LF M G+ D T +G
Sbjct: 218 KLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIG 277
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ +A + ++ K V + + +GVD++ V I +KC L+ A +F
Sbjct: 278 VAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITC 337
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R WN++I G + +L + M + D T S+ ++ + L G+ V
Sbjct: 338 RFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKV 397
Query: 281 HSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
H+ I G +++ VS+ N + + Y+KCG ++ R +F+ M DR +SWT++++ Y+Q +
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSE 457
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
D+A+ +F M A G P+ T S++ C LE G+ C GL + + +A
Sbjct: 458 WDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESA 517
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+DMY+KCG +GDA+++F + VSWT +IAG A +G +AL LF +M++L + PN
Sbjct: 518 LVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPN 577
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VTFL VL AC+H G +E+G YF LM K Y + PE+ HY+C+ DLL R G L +A++F+
Sbjct: 578 AVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFI 637
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
MP++ + +W TLL AC++H N+E+GE A ++ + ++A YV ++N Y G +
Sbjct: 638 SRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYK 697
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+LR +MK VKK PG S + +NG F D
Sbjct: 698 DGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGD 733
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 242/485 (49%), Gaps = 11/485 (2%)
Query: 12 KIYRSST---INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
K++ + T + WN+ I + A LF RM + P+ TF +AKA L
Sbjct: 227 KVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLR 286
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAM 126
D ++ + G+ ++ S+ V T ++DM +KC L A +F+ + R A WNAM
Sbjct: 287 DVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAM 346
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I G+ + GF EK L LF M I D T + A K LSL K VH+ I G+
Sbjct: 347 ISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGL 406
Query: 187 DAD-VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+ + VS+ N +AYAKC L+ VF +E+ R ++SW S++ + ++D ++
Sbjct: 407 EVNYVSISNAVANAYAKCGSLEDVRKVFNRMED--RDLISWTSLVTAYSQCSEWDKAIEI 464
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ +M +G P+ T S+L SC L G+ VH G D+D + + L+ MY+K
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAK 524
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG + A+ +F+ + + VSWTA+I+G+AQ G +D+AL+LF M G P+ VT L +
Sbjct: 525 CGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCV 584
Query: 366 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 423
+ C G +E G ++F + GL + ++D+ S+ G + DA E +P E
Sbjct: 585 LFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEP 644
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
+ W T++ C ++G VE +L Q + N T++ + +G + G
Sbjct: 645 NEMVWQTLLGACRVHGN-VELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLR 703
Query: 484 NLMTK 488
++M +
Sbjct: 704 HVMKE 708
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 238/496 (47%), Gaps = 11/496 (2%)
Query: 73 SQMIHGHIVKSPFWS--DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++ +HG ++KS F + + + + Y+KC +D A +LFD+M R+ SW +I G
Sbjct: 87 AKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGL 146
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A+ G F M+ GI D G+ Q I + L VH+ + G +
Sbjct: 147 AENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHT 206
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V ++ YAK +++ + VF + E VVSWN++I G T D + D+ + + M+
Sbjct: 207 FVSTALLNMYAKLQEIEDSYKVFNTMTE--VNVVSWNAMITGFTSNDLYLDAFDLFLRMM 264
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G PD T + + + + + + V + + G D + V LI M SKCG +
Sbjct: 265 GEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQ 324
Query: 311 SARFLFDG--MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
AR +F+ + R W AMISGY + G ++AL LF M D T S+ +
Sbjct: 325 EARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNA 384
Query: 369 CGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
L LGK A GL+ N V + NA+ + Y+KCGS+ D R++F + ++ ++S
Sbjct: 385 IAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLIS 444
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT+++ + E+ +A+++F M + PN+ TF +VL +C + LE G ++
Sbjct: 445 WTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIIC 504
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
KV ++ + S + D+ + G L +A + +D W ++ H ++
Sbjct: 505 KV-GLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDA 562
Query: 548 EYVAYRLFEL--EPHS 561
+ R+ +L EP++
Sbjct: 563 LQLFRRMVQLGVEPNA 578
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 149/316 (47%), Gaps = 6/316 (1%)
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC--NTWISAYAKCNDLKMAELVFRG 215
++ L + + A+ L K+VH F + S+ N AY+KC+D+ A +F
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ + R SW +I G F D F+ M G PD +L C+ +++
Sbjct: 131 MSQ--RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G +VH+ + GF V L++MY+K +I+ + +F+ M + VSW AMI+G+
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+A LF M G PD T + + G + K YA G+ N +
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL 308
Query: 396 VCNALIDMYSKCGSIGDARELF--YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V ALIDM SKCGS+ +AR +F + + + W MI+G +G +AL+LF +M +
Sbjct: 309 VGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ 368
Query: 454 LDLRPNRVTFLAVLQA 469
D+ + T+ +V A
Sbjct: 369 NDIYLDHYTYCSVFNA 384
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI--NTLISMYSKCGDIDSARFL 315
+ +V LL CV L Q + VH + F S++ N + YSKC DID+A L
Sbjct: 68 IQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRL 127
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M R SWT +I+G A+ G + F M++ G PD ++ C ++
Sbjct: 128 FDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSI 187
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
ELG G + V AL++MY+K I D+ ++F + E VVSW MI G
Sbjct: 188 ELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGF 247
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
N +++A DLF +MM + P+ TF+ V +A
Sbjct: 248 TSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/567 (34%), Positives = 319/567 (56%), Gaps = 8/567 (1%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLD 106
+ + P++ TFP + +A + + +H ++ ++F ++V Y + R+
Sbjct: 63 HPLRPDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVA 119
Query: 107 CAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAI 166
AY++FD+MP+RDV +WNAM+ G + + L M G+ D VT+ + +
Sbjct: 120 EAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCV 179
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
+L +H + + G+ ++ VCN I Y K L A VF G+ LR +V+W
Sbjct: 180 VLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGM--ALRDLVTW 237
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
NSII G K ++ + M+ G PDV T+VSL S+ + + VH +
Sbjct: 238 NSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRR 297
Query: 287 YGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
G+D+ D+ N ++ MY+K ID+A+ +FD + DR VSW +I+GY Q G +EA+R
Sbjct: 298 RGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIR 357
Query: 346 LFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
++ M G P T +S++ G L+ G + GL +V V LID+Y
Sbjct: 358 IYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLY 417
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCG + +A LF +P ++ W +IAG ++G +AL LF QM + +++P+ VTF+
Sbjct: 418 AKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFV 477
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
++L AC+HAG +++G +F+LM VY + P HY+CM D+LGR G+L EA +F+QSMPI
Sbjct: 478 SLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPI 537
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
K D+ +WG LL AC+IH N+E+G+ + LFEL+P + YV M+N+YA G+WDGV +
Sbjct: 538 KPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAV 597
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTF 611
R++++R ++K PG S + + G F
Sbjct: 598 RSLVRRQNLQKTPGWSSMEVKGSVSVF 624
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 212/453 (46%), Gaps = 8/453 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ + A A+ L RM + + +T + C L D + ++H
Sbjct: 133 VPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHV 192
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ VK ++FV ++D+Y K L A+ +F M RD+ +WN++I Q G +
Sbjct: 193 YAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAA 252
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWI 197
+ LF+ M G+ D +T++ L A KSVH + G D D+ N +
Sbjct: 253 AVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMV 312
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRP 256
YAK + + A+ VF + + R VVSWN++I G ++++ Y M ++G +P
Sbjct: 313 DMYAKMSKIDAAQKVFDNLPD--RDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKP 370
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T VS+L + L QG +H+ I G +LDV V LI +Y+KCG + A FLF
Sbjct: 371 IQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLF 430
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ M R+ W A+I+G G +AL LF M+ PD VT +S+++ C +G ++
Sbjct: 431 EHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVD 490
Query: 377 LGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAG 434
G+ +FD G+ ++DM + G + +A E ++P K W ++
Sbjct: 491 QGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGA 550
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
C ++G + ELD P V + ++
Sbjct: 551 CRIHGNVEMGKVASQNLFELD--PENVGYYVLM 581
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 213/611 (34%), Positives = 328/611 (53%), Gaps = 10/611 (1%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE----PNNLTFPFIAKAC 64
R+ KI + WNS IR D + + LL +M + D E P+ T + C
Sbjct: 240 RVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVC 299
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
A+ + + +HG +K ++ V ++DMY+KC ++ A +F +++V SWN
Sbjct: 300 ARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWN 359
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
M+ GF+ G + K L M G ++AD VT++ L LK +H + +
Sbjct: 360 TMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSL 419
Query: 183 HIG-VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
V + V N ++++YAKC L A VF I +TV SWN++IGG +
Sbjct: 420 KQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRS--KTVNSWNALIGGYSQSSDPRL 477
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
SL+ Y M G PD+ TV SLLS+C ++L G+ VH I + D V +L+S
Sbjct: 478 SLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLS 537
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
+Y CG++ +A LFD M D+T VSW M++GY Q G + AL LF M G P ++
Sbjct: 538 LYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEIS 597
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++S+ C +L LG+ YA L+DN + ++IDMY+K GS+ ++ ++F L
Sbjct: 598 MMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLK 657
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
E++V SW M+ G ++G EA+ LF +M P+ +TFL VL AC H+G + +G
Sbjct: 658 ERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLT 717
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF-VQSMPIKSDAGIWGTLLCACKI 540
Y + M ++ +NP L HY+C+ D+L R GKL EAL + M + GIW LL +C+I
Sbjct: 718 YLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRI 777
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+N+E+GE +A +LF EP YV ++N+YA G+WD V +R MK ++K G S
Sbjct: 778 HKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCS 837
Query: 601 LVHINGKTCTF 611
+ +NGK +F
Sbjct: 838 WIELNGKVFSF 848
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 235/465 (50%), Gaps = 10/465 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYS 73
R + QWN+ I H L +F +M ++ + P+N TFP + KACA +S+
Sbjct: 144 RKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVG 203
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+HG +VK+ D+FV +V Y + A ++F MP+R++ SWN+MI F+
Sbjct: 204 LAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDN 263
Query: 134 GFLEKVLCLFYNMR----LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
G E+ L M + D T+ + + + + K VH + + +D +
Sbjct: 264 GLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKE 323
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V N + Y+KC + A+++F+ + VVSWN+++GG + + + R M
Sbjct: 324 VVVNNALMDMYSKCGCINDAQVIFK--LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQM 381
Query: 250 IYDG--FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI-NTLISMYSKC 306
+ G R D T+++ + C L + +H + + F + ++ N ++ Y+KC
Sbjct: 382 LAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKC 441
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + A +F + +T SW A+I GY+Q D +L +F M+++G +PDL TV S++
Sbjct: 442 GSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLL 501
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S C Q +L+LGK L+ + V +L+ +Y CG + A LF A+ +KT+V
Sbjct: 502 SACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLV 561
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
SW TM+ G NG AL LF QM+ ++P ++ ++V AC+
Sbjct: 562 SWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 203/436 (46%), Gaps = 11/436 (2%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
+A + D + IH + +S S D + T ++ MY+ C D + +FD + +++
Sbjct: 89 QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
WNA+I +++ VL +F M G+ D T + +A + + +VH
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+ + DV V N +S Y + A VF+ + E R +VSWNS+I +
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPE--RNLVSWNSMIRVFSDNGLS 266
Query: 240 DDSLNFYRHMIYD----GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
++ M+ F PDV T+ ++L C + G+ VH + D +V V
Sbjct: 267 EECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVV 326
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N L+ MYSKCG I+ A+ +F ++ VSW M+ G++ GD+ + L M A G
Sbjct: 327 NNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGG 386
Query: 356 --VPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGD 412
D VT+L+ + C + L K Y+ + +N +V NA + Y+KCGS+
Sbjct: 387 DLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSY 446
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A +F ++ KTV SW +I G + + + +LD + QM L P+ T ++L AC+
Sbjct: 447 AHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQ 506
Query: 473 AGFLEKGWGYFNLMTK 488
L+ G L+ +
Sbjct: 507 IKSLKLGKEVHGLIIR 522
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVP 357
+I+MYS CG D +R +FD + + W A+IS Y++ L +F M +G +P
Sbjct: 123 VITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLP 182
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T ++ C +++G L ++V V NAL+ Y GS+ DA +F
Sbjct: 183 DNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVF 242
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD----LRPNRVTFLAVLQACTHA 473
+PE+ +VSW +MI + NG E L QMME D P+ T VL C
Sbjct: 243 KIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARD 302
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ G G L K+ ++ E+ + + D+ + G + +A
Sbjct: 303 REIGVGKGVHGLAMKL-SLDKEVVVNNALMDMYSKCGCINDA 343
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 370 GQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
G+ ++LG+ S L ++ ++C +I MYS CGS D+R +F AL +K + W
Sbjct: 92 GRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW 151
Query: 429 TTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
+I+ + N + L++F +M+ E L P+ TF V++AC ++ G L+
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
K V ++ + + G G + +AL + MP ++
Sbjct: 212 KTRLVE-DVFVSNALVSFYGTNGSVSDALRVFKIMPERN 249
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 302/542 (55%), Gaps = 23/542 (4%)
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+L++ M+ + F I + MV+ + R + A++LFDK+ DRDV SWN+MI G
Sbjct: 166 YLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISG 225
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G E+ L ++ M +GI D T++ + ++ LSL K+VHS I +
Sbjct: 226 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR 285
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
++ NT + Y+KC DL A VF + G R VVSW S+I G T + D ++ + M
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKM--GERNVVSWTSMIAGYTRDGRSDGAIKLLQQM 343
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G + DV + S+L +C +L G+ VH + + ++ V N L+ MY+KCG +
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSM 403
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
++A +F M + +SW MI G+L PD T+ ++ C
Sbjct: 404 EAANSVFSTMVVKDIISWNTMI------GELK---------------PDSRTMACVLPAC 442
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MIAG ++G EA+ F++M + + P+ V+F+++L AC+H+G LE+GW +F +M
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKND 562
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P+L HY+CM DLL R G L +A +F++++PI DA IWG LLC C+ + +IE+ E
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEK 622
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA R+FELEP ++ YV +ANIYA +W+ V LR + + ++K PG S + I GK
Sbjct: 623 VAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVN 682
Query: 610 TF 611
F
Sbjct: 683 LF 684
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 200/417 (47%), Gaps = 25/417 (5%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V + L ++++M I+ + T + CA + +H
Sbjct: 218 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS F I T++DMY+KC LD A ++F+KM +R+V SW +MI G+ + G + +
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M G++ D V + + A + L K VH + +++++ VCN + Y
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC ++ A VF + ++ ++SWN++IG +PD T
Sbjct: 398 AKCGSMEAANSVFSTMV--VKDIISWNTMIG---------------------ELKPDSRT 434
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +L +C AL +G+ +H + + G+ D V N L+ +Y KCG + AR LFD +
Sbjct: 435 MACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ VSWT MI+GY G +EA+ F M AG PD V+ +S++ C SG LE G +
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
+F ++ + ++D+ S+ G++ A E LP W ++ GC
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGC 611
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 210/478 (43%), Gaps = 85/478 (17%)
Query: 54 NLTFPFIAKACAKLSDFLYSQ---MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
NL F + + +F SQ IH +K+ +S IF + + A R
Sbjct: 7 NLCFSPLTLNQNRKENFFSSQNGCFIHKPSLKTKIFSPIFSSCIPIRISATPTR------ 60
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
D V +NA I+ F Q+G LE + L + ++ T + Q K
Sbjct: 61 ----TIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKS 114
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG--------------- 215
+ K VHS V D ++ +S YA C DLK VF
Sbjct: 115 FTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSE 174
Query: 216 -----------------IEEGL-----------------RTVVSWNSIIGGCTYGDKFDD 241
+E+G+ R V+SWNS+I G +
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTER 234
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
L Y+ M+Y G D+ T++S+L C L G+ VHS I F+ ++ NTL+
Sbjct: 235 GLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 294
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKCGD+D A +F+ M +R VSWT+MI+GY + G D A++L ME G D+V
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ S++ C +SG+L+ GK +Y + ++ N+ VCNAL+DMY+KCGS+ A +F +
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
K ++SW TMI +L+P+ T VL AC LE+G
Sbjct: 415 VKDIISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERG 451
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 146/332 (43%), Gaps = 57/332 (17%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI------- 309
+ T S+L C ++ G+ VHS +D ++ L+S Y+ CGD+
Sbjct: 98 ETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVF 157
Query: 310 --------------------------------------------DSARFLFDGMCDRTRV 325
+SA LFD +CDR +
Sbjct: 158 DTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVI 217
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SW +MISGY G + L ++ M G DL T++S++ GC SG L LGK + A
Sbjct: 218 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
+ + N L+DMYSKCG + A +F + E+ VVSWT+MIAG +G A+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA-- 503
L QM + ++ + V ++L AC +G L+ G ++ + N E N + C A
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK---DVHDYIKANNMESNLFVCNALM 394
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
D+ + G ++ A +M +K D W T++
Sbjct: 395 DMYAKCGSMEAANSVFSTMVVK-DIISWNTMI 425
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 330/602 (54%), Gaps = 14/602 (2%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR+N I W+ IR V A KAL L+ +M + + P T+PF+ KACA L
Sbjct: 64 PRINPI-------AWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGL 116
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
++IH H+ S F +D++V T +VD YAKC LD A K+FD+MP RD+ +WNAMI
Sbjct: 117 RAIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMI 176
Query: 128 VGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
GF+ L V+ LF +MR + + T++G+ A A L K+VH + +G
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D+ V + YAK + A VF + + V+W+++IGG + ++ +
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVFD--SDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 247 RHMIYDGFRPDVTTVVS--LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
M+ + VT V +L C L GR VH + I GF LD++V NT+IS Y+
Sbjct: 295 LQMLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYA 354
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
K G + A F + + VS+ ++ISG + +E+ RLF M+++G PD+ T+L
Sbjct: 355 KYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLG 414
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+++ C AL G Y G N +CNAL+DMY+KCG + A+ +F + ++
Sbjct: 415 ILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRD 474
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+VSW TM+ G ++G EAL LF+ M + + P+ VT LA+L AC+H+G +++G FN
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFN 534
Query: 485 LMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
M++ + V P L+HY+CM DLL R G L EA DFV MP + D + GTLL AC ++N
Sbjct: 535 SMSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKN 594
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+E+G V+ ++ L + V ++N Y+ RW+ A +R K++ + K PG S V
Sbjct: 595 VELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVD 653
Query: 604 IN 605
++
Sbjct: 654 VD 655
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 239/494 (48%), Gaps = 16/494 (3%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
F + ++C + + + Q+IH H++K S V + +YA C+ ++ A +FD++
Sbjct: 2 FLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 116 PDRDV--ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
P + +W+ MI + GF EK L L+Y M G++ T + +A + +
Sbjct: 62 PHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIED 121
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
K +HS AD+ VC + YAKC +L MA VF + + R +V+WN++I G
Sbjct: 122 GKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPK--RDIVAWNAMISGF 179
Query: 234 TYGDKFDDSLNFYRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
+ D + + M D P+++T+V + + AL +G+ VH + GF D
Sbjct: 180 SLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ V ++ +Y+K I AR +FD + V+W+AMI GY + + EA +F M
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLV 299
Query: 353 AGEVPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
++ + V + ++ GC + G L G+ YA G ++ V N +I Y+K GS+
Sbjct: 300 NADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSL 359
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
DA F + K +VS+ ++I+GC N E+ LFHQM +RP+ T L +L AC
Sbjct: 360 CDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTAC 419
Query: 471 THAGFLEKG---WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
++ L G GY + Y VN + + + D+ + GKL A +M K D
Sbjct: 420 SNLAALGHGSSCHGY--CVVNGYAVNTSICN--ALMDMYTKCGKLYVAKRVFDTMH-KRD 474
Query: 528 AGIWGTLLCACKIH 541
W T+L IH
Sbjct: 475 IVSWNTMLFGFGIH 488
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/597 (35%), Positives = 321/597 (53%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKAL-LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I + + + LL + + + P+ +T I CA + IHG
Sbjct: 215 WNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLA 274
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK ++ V MV MY+KC L+ A F K +++V SWN MI F+ G + +
Sbjct: 275 VKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAF 334
Query: 141 CLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L M++ G ++A+ VT++ + A + L LK +H + V + N +I
Sbjct: 335 NLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFIL 393
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
AYAKC L AE VF GI G +TV SWN++IGG +L+ M Y G +PD
Sbjct: 394 AYAKCGALNSAEKVFHGI--GDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDW 451
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ SLL +C ++L G+ +H + + G + D V +L+S Y CG SAR LFD
Sbjct: 452 FTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDR 511
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M D+ VSW AMISGY+Q G E+L LF + G + ++S+ C Q AL LG
Sbjct: 512 MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG 571
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K Y ++ V ++IDMY+K G I ++R++F L +K V SW +I ++
Sbjct: 572 KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EA++L+ +M ++ P+R T++ +L AC HAG +E+G YF M + P+L H
Sbjct: 632 GHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEH 691
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ D+L R G+L +AL V MP ++D IW +LL +C+ +EIGE VA +L ELE
Sbjct: 692 YACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELE 751
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P A YV ++N+YA G+WDGV +R MMK ++K G S + + G+ +F V D
Sbjct: 752 PDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGD 808
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 249/496 (50%), Gaps = 8/496 (1%)
Query: 49 DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
D +P+N TFP + KAC + D ++IHG ++K D+FV +V MY KC +D A
Sbjct: 141 DFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEA 200
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIH 167
K+FD MP+ ++ SWN+MI F++ GF L M G+ D VTV+ +
Sbjct: 201 MKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAG 260
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + +H + +G+ +V V N + Y+KC L A++ F ++ + VVSWN
Sbjct: 261 EGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSF--VKNNNKNVVSWN 318
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
++I + +++ N + M G + + T++++L +C+ L + +H +
Sbjct: 319 TMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSF 378
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
+ F V + N I Y+KCG ++SA +F G+ D+T SW A+I G+AQ GD +AL
Sbjct: 379 RHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALH 437
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
L F M +G+ PD T+ S++ C +L+ GK Y GL+ + V +L+ Y
Sbjct: 438 LLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYI 497
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
CG AR LF + +K +VSW MI+G + NG E+L LF + + ++ + + ++
Sbjct: 498 HCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVS 557
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
V AC+ L G + K Q S + D+ + G +KE+ + K
Sbjct: 558 VFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSII-DMYAKSGCIKESRKVFDGLKDK 616
Query: 526 SDAGIWGTLLCACKIH 541
+ A W ++ A IH
Sbjct: 617 NVAS-WNAIIVAHGIH 631
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 219/454 (48%), Gaps = 18/454 (3%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
+ +AC D + +H + S + +D + T ++ MYA C + +FD M
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLL 174
+++ WNA++ G+ + G V+ +F M LV Q D T + +A + L
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVF--MDLVSDTDFQPDNFTFPSVIKACGGILDVRLG 165
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+ +H I +G+ DV V N + Y KC + A VF + E +VSWNS+I +
Sbjct: 166 EVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPE--TNLVSWNSMICAFS 223
Query: 235 YGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
DS + M+ +G PDV TVV++L C + G +H + G +V
Sbjct: 224 ENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEV 283
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V N ++ MYSKCG ++ A+ F ++ VSW MIS ++ +GD++EA L M+
Sbjct: 284 MVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQ 343
Query: 354 GE--VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
GE + VT+L+++ C L K Y+ + +V + NA I Y+KCG++
Sbjct: 344 GEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALN 402
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A ++F+ + +KTV SW +I G A NG+ +AL L QM +P+ T ++L AC
Sbjct: 403 SAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACA 462
Query: 472 HAGFLEKG---WGYF---NLMTKVYQVNPELNHY 499
H L+ G GY L T + L+HY
Sbjct: 463 HLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHY 496
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 164/363 (45%), Gaps = 37/363 (10%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T++ WN+ I + KAL L +M + +P+ T + ACA L Y + IH
Sbjct: 415 TVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIH 474
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+++++ +D FV T+++ Y C + A LFD+M D+++ SWNAMI G++Q G
Sbjct: 475 GYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPY 534
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF GIQ+ + ++ + A L L K H + + D V + I
Sbjct: 535 ESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSII 594
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAK +K + VF G+++ + V SWN+II +++ Y M G PD
Sbjct: 595 DMYAKSGCIKESRKVFDGLKD--KNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPD 652
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLF 316
T + +L +C LV+ G+ Y ++ + ++I + Y+
Sbjct: 653 RFTYIGILMAC-GHAGLVE------EGLKYFKEMQNFNLIEPKLEHYA------------ 693
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+I A+ G LD+ALRL M E D S++ C GALE
Sbjct: 694 ------------CLIDMLARAGRLDDALRLVNEMP---EEADNRIWSSLLRSCRTFGALE 738
Query: 377 LGK 379
+G+
Sbjct: 739 IGE 741
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 147/288 (51%), Gaps = 13/288 (4%)
Query: 264 LLSSCVCPEALVQGRLVH---SHGIHYGFDLDVSVINT-LISMYSKCGDIDSARFLFDGM 319
LL +C + + GR +H S HY D V+NT LI MY+ CG +R +FD M
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDY---VLNTRLIKMYAMCGSPLDSRLVFDNM 105
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
+ + W A++SGY + G + +++F + + + PD T S+I CG + LG
Sbjct: 106 ETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLG 165
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ GL +V V NAL+ MY KCG++ +A ++F +PE +VSW +MI + N
Sbjct: 166 EVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSEN 225
Query: 439 GEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G ++ DL +M+ E L P+ VT + +L C G ++ G G L K+ ++ E+
Sbjct: 226 GFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKL-GLSEEVM 284
Query: 498 HYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
+ M + + G L EA + FV++ + W T++ A + ++
Sbjct: 285 VNNAMVYMYSKCGYLNEAQMSFVKNN--NKNVVSWNTMISAFSLEGDV 330
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + WN+ I +++L LFR+ I+ + + + AC++LS +
Sbjct: 513 KDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGK 572
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
HG+++K+ D FV +++DMYAK + + K+FD + D++VASWNA+IV G
Sbjct: 573 EAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHG 632
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSVHSFGI 182
++ + L+ M+ VG D T +G+ A HA + L K + +F +
Sbjct: 633 HGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNL 684
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 320/594 (53%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + + + L LF M + D++ N T + K CA + Q+IH I+
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + + F+ +VDMY+KC A +F + D+ W+A+I Q G E+ +
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ MRL + T+ L AA + +L +S+H+ G + DV+V N ++ Y
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + ++ + + R ++SWN+ + G +D L + HM+ +GF P++ T
Sbjct: 462 KNGCVHDGTKLYESMVD--RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S+L SC C + GR VH+H I D + V LI MY+KC ++ A F+ +
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R +WT +I+ YAQ ++AL F M+ G P+ T+ +SGC +LE G+
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G ++ V +AL+DMY+KCG + +A LF AL + ++W T+I G A NG+
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL F M++ + P+ VTF +L AC+H G +E+G +FN M + + ++P ++H +C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR GK E DF+Q M + +A IW T+L A K+H N+ +GE A +LFEL+P
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y+ ++NI+A GRWD V +R++M VKK PG S V NG+ TF D
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHD 873
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 259/516 (50%), Gaps = 4/516 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I+ V + A+ ++ LF+ M+ I PN T KAC+ + +H
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+FV + +VD+YAKC ++ A K+F MP+++ +WN ++ G+AQ G + VL
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M + ++ + T+ + + ++K+L + +HS I G + + + + Y+
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC A VF+ I++ +V W+++I + ++S+ + M P+ T+
Sbjct: 361 KCGLAIDAIGVFKTIKK--PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTI 418
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
SLLS+ L G+ +H+ YGF+ DV+V N L++MY K G + L++ M D
Sbjct: 419 CSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD 478
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R +SW A +SG G D L +F+ M G +P++ T +S++ C + G+
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ L DN VC ALIDMY+KC + DA F L + + +WT +I A +
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQG 598
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL+ F QM + ++PN T L C+ LE G +++ K V+ ++ S
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS-DMFVGSA 657
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ D+ + G ++EA +++ I+ D W T++C
Sbjct: 658 LVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 208/410 (50%), Gaps = 2/410 (0%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+ CA ++ IHG IVK D + ++V++YAKC A + KMPDRDV
Sbjct: 120 RECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVV 179
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
SW A+I G GF + LF M+ GI + T+ +A L L K +H+
Sbjct: 180 SWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQA 239
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+G+ D+ V + + YAKC ++++A +F G+ E + V+WN ++ G
Sbjct: 240 FKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPE--QNDVTWNVLLNGYAQRGDVTG 297
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
L + M+ + + T+ ++L C + L QG+++HS I G++ + + L+
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKCG A +F + V W+A+I+ Q+G +E+++LF M +P+ T
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ S++S +G L+ G+ G + +V V NAL+ MY K G + D +L+ ++
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
++ ++SW ++G G + L +F+ M+E PN TF+++L +C+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 209/445 (46%), Gaps = 4/445 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K + I W++ I + ++ +++ LF M+ D PN T + A +
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
Y Q IH + K F +D+ V +V MY K + KL++ M DRD+ SWNA + G
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G ++ L +FY+M G + T + + + + + VH+ I +D +
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
VC I YAKC L+ A++ F + +R + +W II ++ + +LN++R M
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRL--SVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQ 610
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G +P+ T+ LS C +L G+ +HS G D+ V + L+ MY+KCG ++
Sbjct: 611 EGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A LF+ + R ++W +I GYAQ G ++AL F M G PD VT ++S C
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 372 SGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWT 429
G +E GK F++ G+ V C ++D+ + G + + + + + W
Sbjct: 731 QGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL 454
T++ ++ V +++ EL
Sbjct: 791 TVLGASKMHNNLVLGEKAANKLFEL 815
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 164/311 (52%), Gaps = 2/311 (0%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ L + K++H + ++ D + + ++ YAKC A LV + + R VVSW +
Sbjct: 126 RSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD--RDVVSWTA 183
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+I G +DS+ ++ M +G P+ T+ + L +C AL G+ +H+ G
Sbjct: 184 LIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
LD+ V + L+ +Y+KCG+I+ A +F GM ++ V+W +++GYAQ+GD+ L+LF
Sbjct: 244 LLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFC 303
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
+M + T+ +++ GC S L+ G+ + G + N + L+DMYSKCG
Sbjct: 304 SMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
DA +F + + +V W+ +I G+ E++ LFH M D PN+ T ++L
Sbjct: 364 LAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLS 423
Query: 469 ACTHAGFLEKG 479
A T+ G L+ G
Sbjct: 424 AATNTGNLQYG 434
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 4/274 (1%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S+L C +L + +H + + D + +L+++Y+KC AR + M DR
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSWTA+I G +G ++++ LF M+ G +P+ T+ + + C AL+LGK
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A GL ++ V +AL+D+Y+KCG I A ++F +PE+ V+W ++ G A G+
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVT 296
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSC 501
L LF MMELD++ N T VL+ C ++ L++G +L+ K Y+ N +
Sbjct: 297 GVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG--CG 354
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ D+ + G +A+ +++ K D +W L+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI 387
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/606 (34%), Positives = 329/606 (54%), Gaps = 10/606 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS WN I +D + L F + EPN T + +AC L
Sbjct: 126 RSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGL 185
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG++++S W+ VQ + + MYA D +DCA LFD+MP++DV SW+AMI G+ Q
Sbjct: 186 QLHGYLIQSGLWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIGGYVQ-- 242
Query: 135 FLEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+LE + L +++ I D V ++ + +A ++ ++++ + VH I G+D+D+
Sbjct: 243 YLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLF 302
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N+ I Y+KC D A VF E R VSWNS++ G K+ ++L M
Sbjct: 303 VKNSLIDMYSKCKDAGSAFEVFS--EMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRT 360
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G D T+V+ L C + VH I G + + V+N+LI Y+KC I+
Sbjct: 361 EGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIEL 420
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F R V W+ MI+G+A G DEA+ +F M EVP+ VT+++++ C
Sbjct: 421 AWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSV 480
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
S L+ W A GL V V A++DMYSKCG I +R+ F +P+K +++W+TM
Sbjct: 481 SAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTM 540
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
IA +NG EAL L QM +++PN +T+L+VL AC+H G +E G F M + +
Sbjct: 541 IAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHG 600
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHRNIEIGEY 549
V+PE HYSCM D+L R GKL +A++ ++ MP ++ A +WG LL AC+ +R+ +GE
Sbjct: 601 VDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEK 660
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
Y++ ELEP + A Y+ +++YA G WD A ++ + + V+ G S+VH++ K
Sbjct: 661 AVYQVLELEPLNLAGYLLASSMYASDGLWDNAARMKLLARERGVRAVAGYSIVHVDSKAH 720
Query: 610 TFTVED 615
F D
Sbjct: 721 KFVAGD 726
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 276/556 (49%), Gaps = 45/556 (8%)
Query: 7 PPRLN-------KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNL---T 56
PP+ + +S + W +I+E + H+ + + + I + L
Sbjct: 8 PPKAQASASMAMRFLSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTL 67
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
FP + KAC+ LS ++ + +H ++K+ F S + ++++ Y KC LD A +FD M
Sbjct: 68 FPPVLKACSYLS-YIDGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMR 126
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSLL 174
RD SWN +I G G L + L F N R+ G + + T++ L QA ++ AK L
Sbjct: 127 SRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGL- 185
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+H + I G+ A SV N+++ YA D+ A ++F + E + V+SW+++IGG
Sbjct: 186 -QLHGYLIQSGLWASWSVQNSFLCMYADV-DMDCARILFDEMPE--KDVISWSAMIGG-- 239
Query: 235 YGDKFDDSLN---FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
Y +D + F + + PD +VS+L +C + GRLVH I G D
Sbjct: 240 YVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDS 299
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
D+ V N+LI MYSKC D SA +F M R VSW +++SG EAL L ++M
Sbjct: 300 DLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMR 359
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDN-YACSG--------GLKDNVMVCNALID 402
G D VT+++ L++ K+F + Y C G + N +V N+LID
Sbjct: 360 TEGIEADEVTLVN---------CLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLID 410
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
Y+KC I A E+F + VV W+TMIAG A G+ EA+ +F +M E PN VT
Sbjct: 411 AYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVT 470
Query: 463 FLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
+ +LQAC+ + L++ W + + + + E+ + + D+ + G+++ +
Sbjct: 471 IINLLQACSVSAELKRSMWAHGAAIRR--GLAAEVAVGTAIVDMYSKCGEIEASRKAFNQ 528
Query: 522 MPIKSDAGIWGTLLCA 537
+P K + W T++ A
Sbjct: 529 IPQK-NIITWSTMIAA 543
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 204/598 (34%), Positives = 320/598 (53%), Gaps = 2/598 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ WN+ V +A+ LF+ M ++ I PN + I ACA L + + IH
Sbjct: 147 NVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIH 206
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G ++K D F +VDMY+K ++ A +F + DV SWNA+I G +
Sbjct: 207 GLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCND 266
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L L M+ G + + T+ +A L + +HS I + +D+ +
Sbjct: 267 LALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC + A + + + + +++WN++I G + D+++ + M + +
Sbjct: 327 DMYSKCEMMDDARRAYDSMPK--KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFN 384
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
TT+ ++L S +A+ + +H+ I G D VIN+L+ Y KC ID A +F+
Sbjct: 385 QTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFE 444
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
V++T+MI+ Y+Q GD +EAL+L+ M+ A PD S+++ C A E
Sbjct: 445 ERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQ 504
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK +A G ++ N+L++MY+KCGSI DA F +P + +VSW+ MI G A
Sbjct: 505 GKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQ 564
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL LF+QM+ + PN +T ++VL AC HAG + +G YF M ++ + P
Sbjct: 565 HGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQE 624
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+CM DLLGR GKL EA++ V S+P ++D +WG LL A +IH+NIE+G+ A LF+L
Sbjct: 625 HYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDL 684
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP + +V +ANIYA G W+ VA +R MK ++VKK PG S + I K TF V D
Sbjct: 685 EPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGD 742
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 239/485 (49%), Gaps = 8/485 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+S + V +ALL+F M ++ N TFP + KAC+ D + +HG V
Sbjct: 50 WSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAV 109
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD FV T+V MYAKC LD + +LF + +R+V SWNA+ + Q + +
Sbjct: 110 VTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVG 169
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI + ++ + A + L + +H + +G+D D N + Y+
Sbjct: 170 LFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYS 229
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K +++ A VF+ I VVSWN+II GC D D +L M G RP++ T+
Sbjct: 230 KAGEIEGAVAVFQDIAH--PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTL 287
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L +C GR +HS I D+ L+ MYSKC +D AR +D M
Sbjct: 288 SSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPK 347
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ ++W A+ISGY+Q GD +A+ LF M + + T+ +++ A+++ K
Sbjct: 348 KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQI 407
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G+ + V N+L+D Y KC I +A ++F + +V++T+MI + G+
Sbjct: 408 HTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDG 467
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY------FNLMTKVYQVNPE 495
EAL L+ QM + D++P+ ++L AC + E+G F M ++ N
Sbjct: 468 EEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSL 527
Query: 496 LNHYS 500
+N Y+
Sbjct: 528 VNMYA 532
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 242/496 (48%), Gaps = 35/496 (7%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H H++K F D ++ +V +Y+KC R A KL D+ + DV SW++++ G+ Q GF
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+E+ L +F M L+G++ + T + +A + L++ + VH + G ++D V NT
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC L + +F GI E R VVSWN++ + +++ ++ M+ G
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVE--RNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ ++ +L++C + GR +H + G DLD N L+ MYSK G+I+ A +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + VSW A+I+G D AL L M+ +G P++ T+ S + C G
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
ELG+ + ++ L+DMYSKC + DAR + ++P+K +++W +I+G
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEKG-WGYF 483
+ G+ ++A+ LF +M D+ N+ T VL++ H ++ G + F
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420
Query: 484 NLMTKVYQVNPELNH------------------YSCMADLLGRKGKLKEALDF---VQSM 522
++ + + NH Y+ M + G +EAL +Q
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480
Query: 523 PIKSDAGIWGTLLCAC 538
IK D I +LL AC
Sbjct: 481 DIKPDPFICSSLLNAC 496
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 323/585 (55%), Gaps = 6/585 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I ++ F M+ +P+ ++ I AC+KL L + H
Sbjct: 425 SWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFS 484
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ F S++ + ++ Y+ C +L ++KLF KMP R+ SWN +I G G +K +
Sbjct: 485 FRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAV 544
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L + M+ ++ D VT++ + A++L ++H + I G DVS+ N IS Y
Sbjct: 545 ALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMY 604
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
C D+ + +F + R++VSWN++I G + ++ + + MI +G +P+ T
Sbjct: 605 FNCGDINAGKFLFEVMP--WRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVT 662
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++LL SC L+QG+ +H+ + G ++ +I +LISMY++ +I+S FLF+
Sbjct: 663 LLNLLPSC---RTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGG 719
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
W A++S Y Q + E++ F + A PD +T LS+IS C Q +L L
Sbjct: 720 KEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNS 779
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y G ++++ NALID++++CG+I A+++F L K VSW+TMI G L+G+
Sbjct: 780 VMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGD 839
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL L QM ++P+ +T+ +VL AC+H GF+++GW FN M + V + HY+
Sbjct: 840 SEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVE-EGVPRRMEHYA 898
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G+L EA DFV+ +P K + +LL AC IH N+++GE ++ LFEL+P
Sbjct: 899 CMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPK 958
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
++ YV + NIYA GRW +R+ M+ Q++K PG SLV N
Sbjct: 959 NSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVEGN 1003
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 239/457 (52%), Gaps = 2/457 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N IR D L ++ + + ++ TFPF+ KAC L ++ +H +++
Sbjct: 124 NLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLR 183
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ F ++ +QT +VD YAK R+ A + DK+ D+ +WNA+I G++ GF ++V +
Sbjct: 184 TSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEV 243
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
+ +G++ + T + K L + KS+H F + G +D + IS YA
Sbjct: 244 LRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAG 303
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
+L +A +F E + VV WNS+I K ++ ++ M+ +P+V T V
Sbjct: 304 GGNLFIARDLFDSAAE--KNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFV 361
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S++ C G+ +H+H + Y D +SV L+SMY+K GD++SA F+F M R
Sbjct: 362 SIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRR 421
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
+SW +MISGY G + ++ F M+ G PD +++++++S C + A+ LGK
Sbjct: 422 NLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAH 481
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
++ N+ + NAL+ YS CG + + +LF +P + +SW T+I+GC NG+
Sbjct: 482 AFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTK 541
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+A+ L H+M + + + VT ++++ C A L +G
Sbjct: 542 KAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQG 578
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 235/461 (50%), Gaps = 3/461 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L+KI + + WN+ I + + R++ + ++PN TF I C ++
Sbjct: 213 LDKISQPDLVT-WNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKC 271
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ IHG +VKS F SD F+ ++ MYA L A LFD +++V WN+MI
Sbjct: 272 LDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISA 331
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+AQ + +F M +Q + VT + + ++ + KS+H+ + +D+
Sbjct: 332 YAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQ 391
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+SV +S YAK DL A+ +F + R ++SWNS+I G + ++ S++ + M
Sbjct: 392 LSVATALLSMYAKLGDLNSADFIFYQMPR--RNLLSWNSMISGYGHNGLWEASMDAFCDM 449
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
++GF PD ++V++LS+C EA++ G+ H+ FD ++++ N L++ YS CG +
Sbjct: 450 QFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKL 509
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
S+ LF M R +SW +ISG GD +A+ L M+ DLVT++S+I C
Sbjct: 510 SSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPIC 569
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ L G YA G +V + NALI MY CG I + LF +P +++VSW
Sbjct: 570 RVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWN 629
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+I G + E + F QM+ +PN VT L +L +C
Sbjct: 630 ALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSC 670
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 210/466 (45%), Gaps = 17/466 (3%)
Query: 84 PFWSDIFVQTTMVDMYAKCDRL---------DCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
P S + V+ M D Y + + + A F+ + V N MI G
Sbjct: 75 PLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHG 134
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E VLC++ R++G +D T + +A + + + VH + + ++ +
Sbjct: 135 LFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQT 194
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ YAK + A LV I + +V+WN++I G + + R + G
Sbjct: 195 ALVDFYAKTGRMVKARLVLDKISQP--DLVTWNALISGYSLNGFDKEVFEVLRQINEMGL 252
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+P+V+T S++ C + L G+ +H + GF D + LISMY+ G++ AR
Sbjct: 253 KPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARD 312
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LFD ++ V W +MIS YAQ EA ++F M A P++VT +S+I C S
Sbjct: 313 LFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSAN 372
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
GK + L + V AL+ MY+K G + A +FY +P + ++SW +MI+G
Sbjct: 373 FWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISG 432
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT--HAGFLEKGWGYFNLMTKVYQV 492
NG + ++D F M P+ ++ + +L AC+ A L K F+ +
Sbjct: 433 YGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRK---EF 489
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ LN + + GKL + Q MP++ +A W TL+ C
Sbjct: 490 DSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISGC 534
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/584 (34%), Positives = 314/584 (53%), Gaps = 3/584 (0%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N+ +A LF +M++ EP+ +TF + C + I+K + S + V
Sbjct: 128 NQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVG 187
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
T+VD Y K +RLD A +LF +MP+ D S+NAMI G+++ G EK + LF M+ G++
Sbjct: 188 NTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
T + A I + L + +HSF I +V V N + Y+K + + A +
Sbjct: 248 PTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 307
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + E + VS+N II G + K + + +R + + F ++LS
Sbjct: 308 FDEMPE--QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTL 365
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
GR +H+ I D ++ V N+L+ MY+KCG + A +F + R+ V WTAMIS
Sbjct: 366 DWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMIS 425
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y QKG +E L+LF M A + D T S++ +L LGK ++ G
Sbjct: 426 AYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMS 485
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
NV +AL+D+Y+KCGSI DA + F +P++ +VSW MI+ A NGE L F +M+
Sbjct: 486 NVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMV 545
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
L+P+ V+FL VL AC+H+G +E+G +FN MT++Y+++P HY+ + D+L R G+
Sbjct: 546 LSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRF 605
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-HSAAPYVEMANI 571
EA + MPI D +W ++L AC+IH+N E+ A +LF +E AAPYV M+NI
Sbjct: 606 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNI 665
Query: 572 YALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YA G+W+ V+ + M+ VKK P S V I +T F+ D
Sbjct: 666 YAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSAND 709
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 222/467 (47%), Gaps = 13/467 (2%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
L+ +M H + V + M+ Y K L A KLFD M +R +W +I G+
Sbjct: 74 LFEKMPHKNTVST---------NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGY 124
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+Q+ ++ LF M+ G + D+VT + L + + + V + I +G D+ +
Sbjct: 125 SQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRL 184
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V NT + +Y K N L +A +F+ + E VS+N++I G + + ++N + M
Sbjct: 185 IVGNTLVDSYCKSNRLDLACQLFKEMPE--IDSVSYNAMITGYSKDGLDEKAVNLFVEMQ 242
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G +P T ++L + + + +V G+ +HS I F +V V N L+ YSK +
Sbjct: 243 NSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 302
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR LFD M ++ VS+ +ISGYA G A LF ++ +M+S
Sbjct: 303 DARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIAS 362
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ E+G+ ++V N+L+DMY+KCG +A +F L ++ V WT
Sbjct: 363 NTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTA 422
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
MI+ G + E L LF++M + + ++ TF ++L+A L G + + K
Sbjct: 423 MISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSG 482
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
++ + S + D+ + G +K+A+ Q MP ++ W ++ A
Sbjct: 483 FMSNVFSG-SALLDVYAKCGSIKDAVQTFQEMPDRNIVS-WNAMISA 527
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL---- 340
+ GFD D S N + + K G++ AR LF+ M + VS MISGY + G+L
Sbjct: 44 VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEAR 103
Query: 341 ---------------------------DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
EA LF M+ G PD VT ++++SGC
Sbjct: 104 KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---N 160
Query: 374 ALELGKWFDNYACS---GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
E+G G ++V N L+D Y K + A +LF +PE VS+
Sbjct: 161 GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNA 220
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
MI G + +G +A++LF +M L+P TF AVL C + G
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL 263
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/606 (33%), Positives = 334/606 (55%), Gaps = 14/606 (2%)
Query: 8 PRLNKIY---RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKA 63
P K++ R+ ++ WN+ IR + ++ AL LF +M + P+N T+PF+ KA
Sbjct: 73 PHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKA 132
Query: 64 CAKLSDFLYSQM---IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
C D+L +M IH V S F SD FVQ +++ MY C ++ A ++FD M +R +
Sbjct: 133 CG---DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTL 189
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SWN MI G+ + G +++ L +F M GI+ D TV+ + + K L + + VH+
Sbjct: 190 VSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHAL 249
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ D+SV N+ + YAKC ++ A+++F +++ R VVSW +++ G
Sbjct: 250 VEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDK--RDVVSWTTMMNGYILNGDAR 307
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+L + M ++ +P+ T+ S+LS+C +L GR +H I + +V V LI
Sbjct: 308 SALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALI 367
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY+KC +++ + +F + W A+ISG G +A+ LF M P+
Sbjct: 368 DMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDA 427
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+ S++ L+ + Y G + V LID+YSKCGS+ A +F +
Sbjct: 428 TLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGI 487
Query: 421 P--EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
P +K +++W+ +IAG ++G A+ LF QM++ ++PN +TF ++L AC+HAG +++
Sbjct: 488 PKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDE 547
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G G F M + Q++ +HY+C+ DLLGR G+L+EA + +++M + + +WG LL +C
Sbjct: 548 GLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSC 607
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
IH N+E+GE A LFELEP + YV +ANIY+ GRW ++R MM ++K P
Sbjct: 608 VIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPA 667
Query: 599 QSLVHI 604
SL+ +
Sbjct: 668 HSLIEV 673
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 237/492 (48%), Gaps = 12/492 (2%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGH-----IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
+ + + C ++ IH H ++ SP+ + +++ YA C A KL
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLL--SSLAAAYAMCGCAPHARKL 78
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKH 170
FD++ + + SWNAMI + G L LF M G + D T + +A
Sbjct: 79 FDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLL 138
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ +H+ + G D+D V N+ ++ Y C ++++A VF + E RT+VSWN++I
Sbjct: 139 PEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRE--RTLVSWNTMI 196
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G ++L + MI G PD TVVS+L C + L GR VH+
Sbjct: 197 NGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLG 256
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+SV N+L+ MY+KCG++D A+ +F M R VSWT M++GY GD AL L M
Sbjct: 257 EDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMM 316
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ P+ VT+ S++S C +L+ G+ +A L+ V+V ALIDMY+KC ++
Sbjct: 317 QFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNV 376
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+ +F ++ W +I+GC NG +A++LF QM+ + PN T ++L A
Sbjct: 377 NLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAY 436
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAG 529
L++ + + ++ + + + D+ + G L+ A + +P K D
Sbjct: 437 AFLTDLQQARNMHGYLIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDII 495
Query: 530 IWGTLLCACKIH 541
W ++ +H
Sbjct: 496 TWSAIIAGYGMH 507
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 320/594 (53%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + + + L LF M + D++ N T + K CA + Q+IH I+
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + + F+ +VDMY+KC A +F + D+ W+A+I Q G E+ +
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ MRL + T+ L AA + +L +S+H+ G + DV+V N ++ Y
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + ++ + + R ++SWN+ + G +D L + HM+ +GF P++ T
Sbjct: 462 KNGCVHDGTKLYESMVD--RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S+L SC C + GR VH+H I D + V LI MY+KC ++ A F+ +
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R +WT +I+ YAQ ++AL F M+ G P+ T+ +SGC +LE G+
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G ++ V +AL+DMY+KCG + +A LF AL + ++W T+I G A NG+
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL F M++ + P+ VTF +L AC+H G +E+G +FN M + + ++P ++H +C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR GK E DF+Q M + +A IW T+L A K+H N+ +GE A +LFEL+P
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y+ ++NI+A GRWD V +R++M VKK PG S V NG+ TF D
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHD 873
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 259/516 (50%), Gaps = 4/516 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I+ V + A+ ++ LF+ M+ I PN T KAC+ + +H
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+FV + +VD+YAKC ++ A K+F MP+++ +WN ++ G+AQ G + VL
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M + ++ + T+ + + ++K+L + +HS I G + + + + Y+
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC A VF+ I++ +V W+++I + ++S+ + M P+ T+
Sbjct: 361 KCGLAIDAIGVFKTIKK--PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTI 418
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
SLLS+ L G+ +H+ YGF+ DV+V N L++MY K G + L++ M D
Sbjct: 419 CSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD 478
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R +SW A +SG G D L +F+ M G +P++ T +S++ C + G+
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ L DN VC ALIDMY+KC + DA F L + + +WT +I A +
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQG 598
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL+ F QM + ++PN T L C+ LE G +++ K V+ ++ S
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS-DMFVGSA 657
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ D+ + G ++EA +++ I+ D W T++C
Sbjct: 658 LVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 208/410 (50%), Gaps = 2/410 (0%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+ CA ++ IHG IVK D + ++V++YAKC A + KMPDRDV
Sbjct: 120 RECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVV 179
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
SW A+I G GF + LF M+ GI + T+ +A L L K +H+
Sbjct: 180 SWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQA 239
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+G+ D+ V + + YAKC ++++A +F G+ E + V+WN ++ G
Sbjct: 240 FKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPE--QNDVTWNVLLNGYAQRGDVTG 297
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
L + M+ + + T+ ++L C + L QG+++HS I G++ + + L+
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKCG A +F + V W+A+I+ Q+G +E+++LF M +P+ T
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ S++S +G L+ G+ G + +V V NAL+ MY K G + D +L+ ++
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
++ ++SW ++G G + L +F+ M+E PN TF+++L +C+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 209/445 (46%), Gaps = 4/445 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K + I W++ I + ++ +++ LF M+ D PN T + A +
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
Y Q IH + K F +D+ V +V MY K + KL++ M DRD+ SWNA + G
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G ++ L +FY+M G + T + + + + + VH+ I +D +
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
VC I YAKC L+ A++ F + +R + +W II ++ + +LN++R M
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRL--SVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQ 610
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G +P+ T+ LS C +L G+ +HS G D+ V + L+ MY+KCG ++
Sbjct: 611 EGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A LF+ + R ++W +I GYAQ G ++AL F M G PD VT ++S C
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 372 SGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWT 429
G +E GK F++ G+ V C ++D+ + G + + + + + W
Sbjct: 731 QGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL 454
T++ ++ V +++ EL
Sbjct: 791 TVLGASKMHNNLVLGEKAANKLFEL 815
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 164/311 (52%), Gaps = 2/311 (0%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ L + K++H + ++ D + + ++ YAKC A LV + + R VVSW +
Sbjct: 126 RSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD--RDVVSWTA 183
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+I G +DS+ ++ M +G P+ T+ + L +C AL G+ +H+ G
Sbjct: 184 LIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
LD+ V + L+ +Y+KCG+I+ A +F GM ++ V+W +++GYAQ+GD+ L+LF
Sbjct: 244 LLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFC 303
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
+M + T+ +++ GC S L+ G+ + G + N + L+DMYSKCG
Sbjct: 304 SMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
DA +F + + +V W+ +I G+ E++ LFH M D PN+ T ++L
Sbjct: 364 LAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLS 423
Query: 469 ACTHAGFLEKG 479
A T+ G L+ G
Sbjct: 424 AATNTGNLQYG 434
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 4/274 (1%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S+L C +L + +H + + D + +L+++Y+KC AR + M DR
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSWTA+I G +G ++++ LF M+ G +P+ T+ + + C AL+LGK
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A GL ++ V +AL+D+Y+KCG I A ++F +PE+ V+W ++ G A G+
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVT 296
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSC 501
L LF MMELD++ N T VL+ C ++ L++G +L+ K Y+ N +
Sbjct: 297 GVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG--CG 354
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ D+ + G +A+ +++ K D +W L+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI 387
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 325/603 (53%), Gaps = 8/603 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
++ +T WN+ IR L ++ +M + + P++ TFPF+ KACA +
Sbjct: 1 MHHRTTAFLWNTLIR-GYSIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRK 59
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +HG +VK F SD+FV T++ Y C L A ++FD+MP++D+ SWN MI F+
Sbjct: 60 GREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSV 119
Query: 133 MGF-LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G+ L +F M G++ + +T+ + + + VH I +G+++D+
Sbjct: 120 NGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIF 179
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMI 250
+ N+ I YAK A VF ++ + VVSWN++I ++F+ ++ R M
Sbjct: 180 IANSLIDMYAKSGHSTEASNVFYKLDA--KNVVSWNAMIANFAQ-NRFELVAVGLVRQMQ 236
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G P+ T ++L +C + G+ +H+ IH G D+ V N L MY+K G +
Sbjct: 237 DYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLK 296
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR +FD R VS+ +I G++Q D E+L LF M+ G D V+ + +S C
Sbjct: 297 LARNVFDTSL-RDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACA 355
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
A++ GK + ++ V N+L+D Y+KCG IG AR +F + K V SW T
Sbjct: 356 NLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNT 415
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
MI G + GE A+DLF M + D+ + V+F+AVL AC+H G LEKG YF+ + K
Sbjct: 416 MILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDEL-KAR 474
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P HY+CM DLLGR G ++EA + ++ +PI DA IWG LL AC+I+ N+E+ +
Sbjct: 475 GIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWA 534
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
A LFEL+P + Y ++N+YA GRWD +R +MK VKK PG S V I +
Sbjct: 535 AEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHA 594
Query: 611 FTV 613
F V
Sbjct: 595 FVV 597
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 324/601 (53%), Gaps = 4/601 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDI-EPNNLTFPFIAKACAKLSDFLYSQM 75
S + WNS + + H L +F+R+ I P++ TFP + KA L +M
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +VKS + D+ V +++V MYAK + + + ++FD+MP+RDVASWN +I F Q G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
EK L LF M G + + V++ A L K +H + G + D V +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y KC+ L++A VF+ + +++V+WNS+I G + MI +G R
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPR--KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P TT+ S+L +C L+ G+ +H + I + D+ V +LI +Y KCG+ + A +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F SW MIS Y G+ +A+ ++ M + G PD+VT S++ C Q AL
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E GK L+ + ++ +AL+DMYSKCG+ +A +F ++P+K VVSWT MI+
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+G+ EAL F +M + L+P+ VT LAVL AC HAG +++G +F+ M Y + P
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPI 546
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HYSCM D+LGR G+L EA + +Q P SD A + TL AC +H +G+ +A L
Sbjct: 547 IEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLL 606
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
E P A+ Y+ + N+YA G WD +R MK ++K PG S + ++ K C F E
Sbjct: 607 VENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAE 666
Query: 615 D 615
D
Sbjct: 667 D 667
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 168/321 (52%), Gaps = 4/321 (1%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L + K L +K VH + +G+ DV +C + I+ Y C D A VF + +
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD--I 67
Query: 221 RT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGR 278
R+ V WNS++ G + F D+L ++ ++ PD T +++ + GR
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
++H+ + G+ DV V ++L+ MY+K +++ +FD M +R SW +IS + Q G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ ++AL LF ME++G P+ V++ IS C + LE GK G + + V +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+DMY KC + ARE+F +P K++V+W +MI G G+ +++ ++M+ RP
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 459 NRVTFLAVLQACTHAGFLEKG 479
++ T ++L AC+ + L G
Sbjct: 308 SQTTLTSILMACSRSRNLLHG 328
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/606 (33%), Positives = 334/606 (55%), Gaps = 14/606 (2%)
Query: 8 PRLNKIY---RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKA 63
P K++ R+ ++ WN+ IR + ++ AL LF +M + P+N T+PF+ KA
Sbjct: 73 PHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKA 132
Query: 64 CAKLSDFLYSQM---IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
C D+L +M IH V S F SD FVQ +++ MY C ++ A ++FD M +R +
Sbjct: 133 CG---DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTL 189
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SWN MI G+ + G +++ L +F M GI+ D TV+ + + K L + + VH+
Sbjct: 190 VSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHAL 249
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ D+SV N+ + YAKC ++ A+++F +++ R VVSW +++ G
Sbjct: 250 VEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDK--RDVVSWTTMMNGYILNGDAR 307
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+L + M ++ +P+ T+ S+LS+C +L GR +H I + +V V LI
Sbjct: 308 SALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALI 367
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY+KC +++ + +F + W A+ISG G +A+ LF M P+
Sbjct: 368 DMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDA 427
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+ S++ L+ + Y G + V LID+YSKCGS+ A +F +
Sbjct: 428 TLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGI 487
Query: 421 P--EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
P +K +++W+ +IAG ++G A+ LF QM++ ++PN +TF ++L AC+HAG +++
Sbjct: 488 PKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDE 547
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G G F M + Q++ +HY+C+ DLLGR G+L+EA + +++M + + +WG LL +C
Sbjct: 548 GLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSC 607
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
IH N+E+GE A LFELEP + YV +ANIY+ GRW ++R MM ++K P
Sbjct: 608 VIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPA 667
Query: 599 QSLVHI 604
SL+ +
Sbjct: 668 HSLIEV 673
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 133/277 (48%), Gaps = 6/277 (2%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDIDSARFLFDGM 319
SLL C +++ + +H+H I G ++++L + Y+ G AR LFD +
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
+ + SW AMI Y G +AL LF M A+G PD T +I CG E+G
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
G + V N+L+ MY CG + AR +F + E+T+VSW TMI G N
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKN 202
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EAL +F M+ + P+ T ++VL C++ LE G + + +V + +++
Sbjct: 203 GCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVG-RRVHALVEVKNLGEDISV 261
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ + D+ + G + EA M K D W T++
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMD-KRDVVSWTTMM 297
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 317/595 (53%), Gaps = 2/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + V ++ A+ +F M + I+P F + AC + + +H +
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMV 228
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + D+F +VDMY K R+D A +F+KMPD DV SWNA+I G G + +
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M+ G+ + T+ + +A A L + +H F I D+D + + Y
Sbjct: 289 ELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK + L A VF + R ++ N++I GC++G + D++L+ + + +G + TT
Sbjct: 349 AKNHFLDDARKVFDWMFH--RDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ ++L S EA R VH+ + GF D V+N LI Y KC + A +F+
Sbjct: 407 LAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECS 466
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ T+MI+ +Q + A++LF M G PD + S+++ C A E GK
Sbjct: 467 SGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + NAL+ Y+KCGSI DA F +LPE+ VVSW+ MI G A +G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL+LF +M++ + PN +T +VL AC HAG +++ YFN M +++ ++ HYS
Sbjct: 587 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYS 646
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR GKL +A++ V SMP +++A IWG LL A ++H++ E+G+ A +LF LEP
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPE 706
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +V +AN YA G W+ VA +R +MK + +KK P S + + K TF V D
Sbjct: 707 KSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGD 761
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 209/420 (49%), Gaps = 4/420 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN+ I V H+A+ L +MK + + PN T I KAC+ F + I
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG ++K+ SD ++ +VDMYAK LD A K+FD M RD+ NA+I G + G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ L LFY +R G+ + T+ + ++ + S + VH+ + IG D V N
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I +Y KC+ L A VF G +++ S+I + D + ++ + M+ G P
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSG--DIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + SLL++C A QG+ VH+H I F D N L+ Y+KCG I+ A F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL- 375
+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++ C +G +
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAG 434
E ++F++ G+ + +ID+ + G + DA EL ++P + S W ++
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 196/394 (49%), Gaps = 6/394 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H ++KS + + ++ Y+KC R CA ++FD++PD SW++++ ++ G
Sbjct: 26 LHASLLKSGSLASF--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ F+ MR G+ + + + + A+ L VH+ + G +DV V N
Sbjct: 84 PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVFVANA 140
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ Y + A VF + R VSWN ++ D+ D++ + M++ G +
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P ++++C + GR VH+ + G+D DV N L+ MY K G +D A +
Sbjct: 200 PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVI 259
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M D VSW A+ISG G A+ L M+ +G VP++ T+ S++ C +GA
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAF 319
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+LG+ + + + L+DMY+K + DAR++F + + ++ +I+GC
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ G EAL LF+++ + L NR T AVL++
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 161/346 (46%), Gaps = 18/346 (5%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
MR G + +T QA + HL SLLKS + S N IS Y+KC
Sbjct: 1 MRSAGTISQQLTRYAAAQALLPGAHLHASLLKS----------GSLASFRNHLISFYSKC 50
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
A VF I + VSW+S++ + ++ + M +G + +
Sbjct: 51 RRPCCARRVFDEIPDPCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF-DGMCDR 322
+L CV P+A + G VH+ + GF DV V N L++MY G +D AR +F + +R
Sbjct: 109 VLK-CV-PDARL-GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSW ++S Y + +A+++F M +G P +++ C S +E G+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
G +V NAL+DMY K G + A +F +P+ VVSW +I+GC LNG
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
A++L QM L PN T ++L+AC+ AG + G M K
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK 331
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 317/595 (53%), Gaps = 2/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + V ++ A+ +F M + I+P F + AC + + +H +
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMV 228
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + D+F +VDMY K R+D A +F+KMPD DV SWNA+I G G + +
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M+ G+ + T+ + +A A L + +H F I D+D + + Y
Sbjct: 289 ELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK + L A VF + R ++ N++I GC++G + D++L+ + + +G + TT
Sbjct: 349 AKNHFLDDARKVFDWMFH--RDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ ++L S EA R VH+ + GF D V+N LI Y KC + A +F+
Sbjct: 407 LAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECS 466
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ T+MI+ +Q + A++LF M G PD + S+++ C A E GK
Sbjct: 467 SGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + NAL+ Y+KCGSI DA F +LPE+ VVSW+ MI G A +G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL+LF +M++ + PN +T +VL AC HAG +++ YFN M +++ ++ HYS
Sbjct: 587 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYS 646
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR GKL +A++ V SMP +++A IWG LL A ++H++ E+G+ A +LF LEP
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPE 706
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +V +AN YA G W+ VA +R +MK + +KK P S + + K TF V D
Sbjct: 707 KSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGD 761
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 209/420 (49%), Gaps = 4/420 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN+ I V H+A+ L +MK + + PN T I KAC+ F + I
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG ++K+ SD ++ +VDMYAK LD A K+FD M RD+ NA+I G + G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ L LFY +R G+ + T+ + ++ + S + VH+ + IG D V N
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I +Y KC+ L A VF G +++ S+I + D + ++ + M+ G P
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSG--DIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + SLL++C A QG+ VH+H I F D N L+ Y+KCG I+ A F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL- 375
+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++ C +G +
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAG 434
E ++F++ G+ + +ID+ + G + DA EL ++P + S W ++
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 195/394 (49%), Gaps = 6/394 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H ++KS + + ++ Y+KC R CA + FD++PD SW++++ ++ G
Sbjct: 26 LHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGL 83
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ F+ MR G+ + + + + A+ L VH+ + G +DV V N
Sbjct: 84 PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVFVANA 140
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ Y + A VF + R VSWN ++ D+ D++ + M++ G +
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P ++++C + GR VH+ + G+D DV N L+ MY K G +D A +
Sbjct: 200 PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVI 259
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M D VSW A+ISG G A+ L M+ +G VP++ T+ S++ C +GA
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAF 319
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+LG+ + + + L+DMY+K + DAR++F + + ++ +I+GC
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ G EAL LF+++ + L NR T AVL++
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 160/346 (46%), Gaps = 18/346 (5%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
MR G + +T QA + HL SLLKS + S N IS Y+KC
Sbjct: 1 MRSAGTISQQLTRYAAAQALLPGAHLHASLLKS----------GSLASFRNHLISFYSKC 50
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
A F I + VSW+S++ + ++ + M +G + +
Sbjct: 51 RRPCCARRFFDEIPDPCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF-DGMCDR 322
+L CV P+A + G VH+ + GF DV V N L++MY G +D AR +F + +R
Sbjct: 109 VLK-CV-PDARL-GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSW ++S Y + +A+++F M +G P +++ C S +E G+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
G +V NAL+DMY K G + A +F +P+ VVSW +I+GC LNG
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
A++L QM L PN T ++L+AC+ AG + G M K
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK 331
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 299/542 (55%), Gaps = 23/542 (4%)
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+L++ M+ + F I + MV+ + R + A +LFDK+ DRDV SWN+MI G
Sbjct: 166 YLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISG 225
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G E+ L ++ M +GI D T++ + ++ LSL K+VHS I +
Sbjct: 226 YVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERR 285
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
++ NT + Y+KC DL A VF + G R VVSW S+I G T + D ++ + M
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKM--GERNVVSWTSMIAGYTRDGRSDGAIRLLQQM 343
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G + DV S+L +C +L G+ VH + + ++ V N L+ MY+KCG +
Sbjct: 344 EKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSM 403
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
D A +F M + +SW MI G+L PD T+ ++ C
Sbjct: 404 DGANSVFSTMVVKDIISWNTMI------GELK---------------PDSRTMACILPAC 442
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MI+G ++G EA+ F++M + + P+ V+F+++L AC+H+G LE+GW +F +M
Sbjct: 503 VMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKND 562
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P+L HY+CM DLL R G L +A +F++++PI DA IWG LLC C+I+ +IE+ E
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEK 622
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA R+FELEP + YV +ANIYA +W+ V +R + + ++K PG S + I GK
Sbjct: 623 VAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVN 682
Query: 610 TF 611
F
Sbjct: 683 LF 684
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 211/478 (44%), Gaps = 85/478 (17%)
Query: 54 NLTFPFIAKACAKLSDFLYSQ---MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
NL F + + +F SQ IH K+ F+S IF + + A R
Sbjct: 7 NLCFSPLTLNQNRKENFFSSQNGCFIHKPTSKATFFSPIFSSCLPIRISATPTR------ 60
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
DR V +NA I+ F Q+G LE + L + ++ T + Q +K
Sbjct: 61 ----TIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKS 114
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG--------------- 215
L+ K VHS V D + +S YA C DLK VF
Sbjct: 115 LTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSE 174
Query: 216 -----------------IEEGL-----------------RTVVSWNSIIGGCTYGDKFDD 241
+E+G+ R V+SWNS+I G +
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTER 234
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
L Y+ M+Y G D+ T++S+L C L G+ VHS I F+ ++ NTL+
Sbjct: 235 GLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLD 294
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKCGD+D A +F+ M +R VSWT+MI+GY + G D A+RL ME G D+V
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVA 354
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S++ C +SG+L+ GK +Y + ++ N+ VCNAL+DMY+KCGS+ A +F +
Sbjct: 355 TTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV 414
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
K ++SW TMI +L+P+ T +L AC LE+G
Sbjct: 415 VKDIISWNTMIG---------------------ELKPDSRTMACILPACASLSALERG 451
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 222/492 (45%), Gaps = 46/492 (9%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V + L ++++M I+ + T + CA + +H
Sbjct: 218 SWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS F I T++DMY+KC LD A ++F+KM +R+V SW +MI G+ + G + +
Sbjct: 278 IKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M G++ D V + A + L K VH + +++++ VCN + Y
Sbjct: 338 RLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC + A VF + ++ ++SWN++IG +PD T
Sbjct: 398 TKCGSMDGANSVFSTMV--VKDIISWNTMIG---------------------ELKPDSRT 434
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +L +C AL +G+ +H + + G+ D V N L+ +Y KCG + AR LFD +
Sbjct: 435 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ VSWT MISGY G +EA+ F M AG PD V+ +S++ C SG LE G +
Sbjct: 495 SKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+F ++ + ++D+ S+ G++ A E LP W ++ GC +
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIY 614
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
+ A + ++ EL+ + GY+ L+ +Y +
Sbjct: 615 HDIELAEKVAERVFELE---------------------PENTGYYVLLANIYAEAEKWEE 653
Query: 499 YSCMADLLGRKG 510
M + +G+KG
Sbjct: 654 VKRMREKIGKKG 665
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 301/542 (55%), Gaps = 23/542 (4%)
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+L++ M+ + F I + MV+ + R + A++LFDK+ DRDV SWN+MI G
Sbjct: 166 YLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISG 225
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G E+ L ++ M +GI D T++ + ++ LSL K+VHS I +
Sbjct: 226 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR 285
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
++ NT + Y+KC DL A VF + G R VVSW S+I G T + D ++ + M
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKM--GERNVVSWTSMIAGYTRDGRSDGAIKLLQQM 343
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G + DV + S+L +C +L G+ VH + + ++ V N L+ MY+KCG +
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSM 403
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
++A +F M + +SW MI G+L PD T+ ++ C
Sbjct: 404 EAANSVFSTMVVKDIISWNTMI------GELK---------------PDSRTMACVLPAC 442
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MIAG ++G EA+ F++M + + P+ V+F+++L AC+H+G LE+GW +F +M
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKND 562
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P+L HY+CM DLL R G L +A +F++++PI DA IWG LLC C+ + +IE+ E
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEK 622
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA R+FELEP + YV +ANIYA +W+ V LR + + ++K PG S + I GK
Sbjct: 623 VAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVN 682
Query: 610 TF 611
F
Sbjct: 683 LF 684
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 212/449 (47%), Gaps = 27/449 (6%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V + L ++++M I+ + T + CA + +H
Sbjct: 218 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS F I T++DMY+KC LD A ++F+KM +R+V SW +MI G+ + G + +
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M G++ D V + + A + L K VH + +++++ VCN + Y
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC ++ A VF + ++ ++SWN++IG +PD T
Sbjct: 398 AKCGSMEAANSVFSTMV--VKDIISWNTMIG---------------------ELKPDSRT 434
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +L +C AL +G+ +H + + G+ D V N L+ +Y KCG + AR LFD +
Sbjct: 435 MACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ VSWT MI+GY G +EA+ F M AG PD V+ +S++ C SG LE G +
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+F ++ + ++D+ S+ G++ A E LP W ++ GC
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNY 614
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ A + ++ EL+ P + +L
Sbjct: 615 HDIELAEKVAERVFELE--PENTGYYVLL 641
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 210/478 (43%), Gaps = 85/478 (17%)
Query: 54 NLTFPFIAKACAKLSDFLYSQ---MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
NL F + + +F SQ IH +K+ +S IF + + A R
Sbjct: 7 NLCFSPLTLNQNRKENFFSSQNGCFIHKPSLKTKIFSPIFSSCIPIRISATPTR------ 60
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
D V +NA I+ F Q+G LE + L + ++ T + Q K
Sbjct: 61 ----TIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKS 114
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG--------------- 215
+ K VHS V D ++ +S YA C DLK VF
Sbjct: 115 FTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSE 174
Query: 216 -----------------IEEGL-----------------RTVVSWNSIIGGCTYGDKFDD 241
+E+G+ R V+SWNS+I G +
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTER 234
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
L Y+ M+Y G D+ T++S+L C L G+ VHS I F+ ++ NTL+
Sbjct: 235 GLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 294
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKCGD+D A +F+ M +R VSWT+MI+GY + G D A++L ME G D+V
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ S++ C +SG+L+ GK +Y + ++ N+ VCNAL+DMY+KCGS+ A +F +
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
K ++SW TMI +L+P+ T VL AC LE+G
Sbjct: 415 VKDIISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERG 451
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 146/332 (43%), Gaps = 57/332 (17%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI------- 309
+ T S+L C ++ G+ VHS +D ++ L+S Y+ CGD+
Sbjct: 98 ETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVF 157
Query: 310 --------------------------------------------DSARFLFDGMCDRTRV 325
+SA LFD +CDR +
Sbjct: 158 DTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVI 217
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SW +MISGY G + L ++ M G DL T++S++ GC SG L LGK + A
Sbjct: 218 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
+ + N L+DMYSKCG + A +F + E+ VVSWT+MIAG +G A+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA-- 503
L QM + ++ + V ++L AC +G L+ G ++ + N E N + C A
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK---DVHDYIKANNMESNLFVCNALM 394
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
D+ + G ++ A +M +K D W T++
Sbjct: 395 DMYAKCGSMEAANSVFSTMVVK-DIISWNTMI 425
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/605 (34%), Positives = 325/605 (53%), Gaps = 6/605 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRM---KKNDIEPNNLTFPFIAKACAKLSDFL 71
R+ + WNS + + + +F+R+ ++ + P+ T + ACA + +
Sbjct: 257 RNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVR 316
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
++HG K ++ V ++VDMY+KC L A LFD ++V SWN +I G++
Sbjct: 317 MGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYS 376
Query: 132 QMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ G V L M R ++ + VTV+ + A L LK +H + G D
Sbjct: 377 KEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDE 436
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N +++AYAKC+ L AE VF G+E +TV SWN++IG SL+ + M+
Sbjct: 437 LVANAFVAAYAKCSSLDCAERVFCGMEG--KTVSSWNALIGAHAQNGFPGKSLDLFLVMM 494
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G PD T+ SLL +C + L G+ +H + G +LD + +L+S+Y +C +
Sbjct: 495 DSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSML 554
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ +FD M +++ V W MI+G++Q EAL F M + G P + V ++ C
Sbjct: 555 LGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACS 614
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
Q AL LGK ++A L ++ V ALIDMY+KCG + ++ +F + EK W
Sbjct: 615 QVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNV 674
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+IAG ++G ++A++LF M RP+ TFL VL AC HAG + +G Y M +Y
Sbjct: 675 IIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLY 734
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
V P+L HY+C+ D+LGR G+L EAL V MP + D+GIW +LL +C+ + ++EIGE V
Sbjct: 735 GVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEV 794
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
+ +L ELEP+ A YV ++N+YA G+WD V +R MK N + K G S + I G
Sbjct: 795 SKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYR 854
Query: 611 FTVED 615
F V D
Sbjct: 855 FLVSD 859
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 253/523 (48%), Gaps = 14/523 (2%)
Query: 40 LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
L + D+ P+N T P +AKACA ++D + +H +K+ +SD FV ++ MY
Sbjct: 181 LFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMY 240
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV---GIQADFV 156
KC ++ A K+F+ M +R++ SWN+++ ++ G + +F + + G+ D
Sbjct: 241 GKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVA 300
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + A + + VH +G+ +V+V N+ + Y+KC L A +F
Sbjct: 301 TMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFD-- 358
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY-DGFRPDVTTVVSLLSSCVCPEALV 275
G + VVSWN+II G + F + M + R + TV+++L +C L+
Sbjct: 359 MNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLL 418
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
+ +H + +GF D V N ++ Y+KC +D A +F GM +T SW A+I +A
Sbjct: 419 SLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHA 478
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q G ++L LF M +G PD T+ S++ C + L GK + GL+ +
Sbjct: 479 QNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEF 538
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +L+ +Y +C S+ + +F + K++V W MI G + N EALD F QM+
Sbjct: 539 IGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGG 598
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC-MADLLGRKGKLKE 514
++P + VL AC+ L G + K + E +C + D+ + G +++
Sbjct: 599 IKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHL--SEDAFVTCALIDMYAKCGCMEQ 656
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
+ + + K +A +W ++ IH + A LFEL
Sbjct: 657 SQNIFDRVNEKDEA-VWNVIIAGYGIHGH----GLKAIELFEL 694
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 209/427 (48%), Gaps = 8/427 (1%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
+ +AC + + +H + S +D+ + T ++ MY+ C + +FD +
Sbjct: 97 ILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+D+ +NA++ G+++ + LF + + D T+ + +A + L ++
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH+ + G +D V N I+ Y KC ++ A VF + R +VSWNS++ C+
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRN--RNLVSWNSVMYACSEN 274
Query: 237 DKFDDSLNFYRHMIY---DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
F + ++ ++ +G PDV T+V+++ +C + G +VH G +V
Sbjct: 275 GGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEV 334
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+V N+L+ MYSKCG + AR LFD + VSW +I GY+++GD L M+
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQRE 394
Query: 354 GEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
+V + VTVL+++ C L K YA G + +V NA + Y+KC S+
Sbjct: 395 EKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDC 454
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A +F + KTV SW +I A NG ++LDLF MM+ + P+R T ++L AC
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR 514
Query: 473 AGFLEKG 479
FL G
Sbjct: 515 LKFLRCG 521
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 11/292 (3%)
Query: 233 CTYGDKFDDSLNFYRHMIYDGF--RPDVT--TVVSLLSSCVCPEALVQGRLVHSH-GIHY 287
C G+ +D+LN +G D++ + LL +C + + GR VH+ +
Sbjct: 64 CDSGN-LNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASH 122
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
DV + +I+MYS CG +R +FD ++ + A++SGY++ +A+ LF
Sbjct: 123 KLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLF 182
Query: 348 FAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
+ +A ++ PD T+ + C +ELG+ A G + V NALI MY K
Sbjct: 183 LELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGK 242
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM---ELDLRPNRVTF 463
CG + A ++F + + +VSW +++ C+ NG F E +F +++ E L P+ T
Sbjct: 243 CGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATM 302
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ V+ AC G + G L K+ + E+ + + D+ + G L EA
Sbjct: 303 VTVIPACAAVGEVRMGMVVHGLAFKL-GITEEVTVNNSLVDMYSKCGYLGEA 353
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 8/207 (3%)
Query: 338 GDLDEALRLFFAMEAAGEVPD----LVTVLSMISGCGQSGALELGKWFDNY-ACSGGLKD 392
G+L++AL L + G V + ++ CG + +G+ + S L++
Sbjct: 67 GNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRN 126
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+V++ +I MYS CGS D+R +F A EK + + +++G + N F +A+ LF +++
Sbjct: 127 DVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELL 186
Query: 453 E-LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
DL P+ T V +AC +E G L K + + +A + G+ G
Sbjct: 187 SATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIA-MYGKCGF 245
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCAC 538
++ A+ ++M ++ W +++ AC
Sbjct: 246 VESAVKVFETMRNRNLVS-WNSVMYAC 271
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/601 (34%), Positives = 323/601 (53%), Gaps = 4/601 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDI-EPNNLTFPFIAKACAKLSDFLYSQM 75
S + WNS + + H L +F+R+ I P++ T+P + KA L +M
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +VKS D+ V +++V MYAK + + + ++FD+MP+RDVASWN +I F Q G
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
EK L LF M + + V++ A L K +H + + D V +
Sbjct: 188 AEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSA 247
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y +C+ L+MA VF+ + +++V+WNS+I G + MI +G R
Sbjct: 248 LVDMYGRCDFLEMAREVFQQMRR--KSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTR 305
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P TT+ S+L +C L+ G+ VH + I D D+ + +LI +Y KCG++ A +
Sbjct: 306 PSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETV 365
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F SW MISGY G+ +A+ ++ M + G PD+VT S++S C Q AL
Sbjct: 366 FLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAAL 425
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E GK L+ + ++ +AL+DMYSKCG++ +A +F ++P+K VVSWT MI+
Sbjct: 426 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAY 485
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+G+ EAL F +M + ++P+ VTFLAVL AC HAG +++G YF+ M Y +
Sbjct: 486 GSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEAS 545
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ YSC+ D+LGR G+L EA +Q P + +A + TL CAC +HR+ +G +A L
Sbjct: 546 IEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLL 605
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
E P A+ Y + N+YA G WD +R MK ++K PG S + +N K C F E
Sbjct: 606 VEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAE 665
Query: 615 D 615
D
Sbjct: 666 D 666
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 228/484 (47%), Gaps = 6/484 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR- 118
+ + C ++++H I+ SD+ + +++++Y C A +F+ + R
Sbjct: 9 LLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRS 68
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI-QADFVTVMGLTQAAIHAKHLSLLKSV 177
DV WN+++ G+++ L +F + I D T + +A L + +
Sbjct: 69 DVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMI 128
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H+ + G DV V ++ + YAK N + + VF + E R V SWN++I
Sbjct: 129 HTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPE--RDVASWNTVISSFYQRG 186
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+ +L + M F P+ ++ +S+C L +G+ +H + F+LD V +
Sbjct: 187 DAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNS 246
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MY +C ++ AR +F M ++ V+W +MI GY +GD + L M G P
Sbjct: 247 ALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRP 306
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
T+ S++ C +S L GK+ Y + ++ + +LID+Y KCG + A +F
Sbjct: 307 SQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVF 366
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ V SW MI+G G + +A+D++ QM+ + ++P+ VTF +VL C+ LE
Sbjct: 367 LKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALE 426
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
KG +L ++ + S + D+ + G +KEA S+P K D W ++ A
Sbjct: 427 KG-KQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIP-KKDVVSWTVMISA 484
Query: 538 CKIH 541
H
Sbjct: 485 YGSH 488
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 168/324 (51%), Gaps = 4/324 (1%)
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ L + + K L K VH + +G+ +DV +C + I+ Y C D A LVF I+
Sbjct: 6 LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65
Query: 218 EGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALV 275
+R+ V WNS++ G + F D+L ++ ++ PD T +++ +
Sbjct: 66 --IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREF 123
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
GR++H+ + G DV V ++L+ MY+K + + +FD M +R SW +IS +
Sbjct: 124 LGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFY 183
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q+GD ++AL LF ME + P+ V++ IS C + LE GK + +
Sbjct: 184 QRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEY 243
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V +AL+DMY +C + ARE+F + K++V+W +MI G G+ ++L ++M+
Sbjct: 244 VNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEG 303
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG 479
RP++ T ++L AC+ + L G
Sbjct: 304 TRPSQTTLTSILMACSRSRNLLHG 327
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 143/283 (50%), Gaps = 8/283 (2%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ + ++SLL C ++L Q +LVH + G DV + +LI++Y C D SAR +F
Sbjct: 2 ESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVF 61
Query: 317 DGMCDRTRVS-WTAMISGYAQKGDLDEALRLF-FAMEAAGEVPDLVTVLSMISGCGQSGA 374
+ + R+ V W +++SGY++ + L++F + VPD T ++I G G
Sbjct: 62 ENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGR 121
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LG+ G +V+V ++L+ MY+K D+ ++F +PE+ V SW T+I+
Sbjct: 122 EFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISS 181
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
G+ +AL+LF +M D PN V+ + AC+ LE+G + K +
Sbjct: 182 FYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGK---EIHRKYLKKEF 238
Query: 495 ELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
EL+ Y S + D+ GR L+ A + Q M KS W +++
Sbjct: 239 ELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVA-WNSMI 280
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 140/299 (46%), Gaps = 3/299 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R ++ WNS IR V + ++ + L RM P+ T I AC++ + L+ +
Sbjct: 269 RRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 328
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG++++S +DI++ +++D+Y KC + A +F K V SWN MI G+ +G
Sbjct: 329 FVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVG 388
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
K + ++ M VG+Q D VT + L K +H ++ D + +
Sbjct: 389 NWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLS 448
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y+KC ++K A +F I + + VVSW +I + ++L + M G
Sbjct: 449 ALLDMYSKCGNVKEASRIFNSIPK--KDVVSWTVMISAYGSHGQPREALYHFDEMQKFGV 506
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+PD T +++LS+C + +G + YG + + + LI + + G + A
Sbjct: 507 KPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEA 565
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 301/540 (55%), Gaps = 5/540 (0%)
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
H ++F ++ YAK + A+ LFD++P D+ S+N +I +A G
Sbjct: 64 HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS 123
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF MR +G+ D T G+ A H+ L++ +HS G D+ VSV N+ ++
Sbjct: 124 ALSLFGEMREMGLVMDGFTFSGVITAC--CNHVGLIRQLHSLAFSSGFDSYVSVKNSLLT 181
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K L+ AE+VF G+ E +R VSWNS+I + +L YR M++ GF D+
Sbjct: 182 YYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM 241
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG-DIDSARFLFD 317
T+ S+L++ C E L G H+ I GF+ + V + LI MY+KCG + +R +F+
Sbjct: 242 FTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFE 301
Query: 318 GMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+C V W MISGY+Q +L EAL F M+ AG PD + + IS C +
Sbjct: 302 EICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPS 361
Query: 377 LGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
GK F A + N + V NAL+ MYSKCG++ DAR+LF +P+ V+ ++IAG
Sbjct: 362 QGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGY 421
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G E+L+LF QM+ + P +T +++L AC H G +E+G YFN+M ++ + PE
Sbjct: 422 AQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPE 481
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
HYSCM DLLGR GKL EA + +MP + W LL AC+ + N+E+ E A +
Sbjct: 482 AEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFL 541
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+LEP +A PY+ +A++Y+ +W+ A +R +M+ ++K PG S + +N + F ED
Sbjct: 542 QLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAED 601
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 210/441 (47%), Gaps = 11/441 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I D+ + AL LF M++ + + TF + AC + + +H
Sbjct: 108 FNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAF 165
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVASWNAMIVGFAQMGFLEKV 139
S F S + V+ +++ Y+K L+ A +F+ M + RD SWN+MIV + Q K
Sbjct: 166 SSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKA 225
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L L+ +M G + D T+ + + LS H+ I G + + V + I
Sbjct: 226 LALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDM 285
Query: 200 YAKCN-DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRPD 257
YAKC + + VF I +V WN++I G + + ++L +R M G+ PD
Sbjct: 286 YAKCGAGMSESRKVFEEICGS--DLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPD 343
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARFLF 316
+ V +S+C + QG+ H+ + + +SV N L++MYSKCG++ AR LF
Sbjct: 344 DCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLF 403
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
M V+ ++I+GYAQ G E+L LF M AA P +T++S++S C +G +E
Sbjct: 404 QRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVE 463
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAG 434
G K+F+ G++ + +ID+ + G + +A L +P +W ++
Sbjct: 464 EGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGA 523
Query: 435 CALNGEFVEALDLFHQMMELD 455
C G A +Q ++L+
Sbjct: 524 CRKYGNMELAEKAANQFLQLE 544
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 157/355 (44%), Gaps = 11/355 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I KAL L+R M E + T + + + D H +
Sbjct: 209 WNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAI 268
Query: 82 KSPFWSDIFVQTTMVDMYAKCDR-LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE-KV 139
K+ F + V + ++DMYAKC + + K+F+++ D+ WN MI G++Q L +
Sbjct: 269 KTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEA 328
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWIS 198
L F M+ G D + + A + S K H+ + + ++ +SV N ++
Sbjct: 329 LECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVT 388
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC +L+ A +F+ + + V+ NSII G +SLN + M+ P
Sbjct: 389 MYSKCGNLQDARKLFQRMPQ--HNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTS 446
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+VS+LS+C + +G+ + +G + + + +I + + G + A L D
Sbjct: 447 ITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLID 506
Query: 318 GMC-DRTRVSWTAMISGYAQKGDL---DEALRLFFAMEAAGEVPDLVTVLSMISG 368
M +W A++ + G++ ++A F +E VP + + SM S
Sbjct: 507 TMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP-YIMLASMYSA 560
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 334/600 (55%), Gaps = 8/600 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I + +A +A+ F M + PN F + +AC+ + ++I G ++
Sbjct: 10 WSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLL 69
Query: 82 KSPFW-SDIFVQTTMVDMYAKCD-RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K+ ++ SD+ V ++DM+ K + L+ AYK+FD+MPDR+V +W MI F Q+GF
Sbjct: 70 KTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDA 129
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF +M L G D T+ G+ A LSL + H + G+D DV V + +
Sbjct: 130 VDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDM 189
Query: 200 YAKC---NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFR 255
YAKC + A VF + + V+SW +II G D +++ + M+ +
Sbjct: 190 YAKCVADGSVDDARKVFDRMP--VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVK 247
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T S+L +C + G V++ + V N+LISMYS+CG++++AR
Sbjct: 248 PNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKA 307
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + ++ VS+ +++ YA+ + +EA LF +E AG + T S++SG GA+
Sbjct: 308 FDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAI 367
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ + G K N+ +CNALI MYS+CG+I A ++F + + V+SWT+MI G
Sbjct: 368 GKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGF 427
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G AL+ FH+M+E + PN VT++AVL AC+H G + +G +F M + + P
Sbjct: 428 AKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPR 487
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HY+C+ DLLGR G L+EA++ V SMP K+DA + T L AC++H N+++G++ A +
Sbjct: 488 MEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMIL 547
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
E +PH A Y+ ++N++A G+W+ VA +R MK + K G S + + K F V D
Sbjct: 548 EQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGD 607
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 201/413 (48%), Gaps = 13/413 (3%)
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
RD+ SW+A+I +A + + F++M G + G+ +A + +++SL K +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 178 HSFGIHIG-VDADVSVCNTWISAYAKCN-DLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
F + G ++DV V I + K N DL+ A VF + + R VV+W +I
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPD--RNVVTWTLMITRFQQ 122
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
D+++ + M+ G+ PD T+ ++S+C L GR H + G DLDV V
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182
Query: 296 INTLISMYSKC---GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAME 351
+L+ MY+KC G +D AR +FD M +SWTA+I+GY Q G D EA+ LF M
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
P+ T S++ C + LG+ L V N+LI MYS+CG++
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNME 302
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+AR+ F L EK +VS+ T++ A + EA +LF+++ N TF ++L +
Sbjct: 303 NARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGAS 362
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA--DLLGRKGKLKEALDFVQSM 522
G + KG + +++ + + N + C A + R G ++ A M
Sbjct: 363 SIGAIGKGE---QIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEM 412
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ +VSW+ +I+ A N + EA+ F M+E PN F V +AC++ + G
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGR-KGKLKEALDFVQSMP 523
F + K ++ + D+ + G L+ A MP
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP 106
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 334/600 (55%), Gaps = 8/600 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRR-MKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
++ + WNS I H A+ F + + ++ ++ TFP + +AC L D
Sbjct: 102 QTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---G 158
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H ++K F D+++ + + Y++ + A LFD M RD+ +WNAMI GF
Sbjct: 159 RKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLN 218
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G + + L +F MR + D VT+ L + + +H + I +G++ D+ VC
Sbjct: 219 GKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVC 278
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ YAK +L+ AE +F ++ +R +VSWNS++ K +L Y M G
Sbjct: 279 NALINMYAKFGELRSAETIFNQMK--VRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIG 336
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSA 312
PD+ T+VSL S + R +H + L D+++ N +I MY+K G IDSA
Sbjct: 337 VVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSA 396
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-AGEVPDLVTVLSMISGCGQ 371
R +F+G+ + +SW ++I+GY+Q G +EA+ ++ +M +G VP+ T +S+++ Q
Sbjct: 397 RKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQ 456
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
GAL+ G L ++ V L+DMY KCG + DA LFY +P ++ VSW +
Sbjct: 457 LGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAI 516
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I+ L+G ++A+ LF +M ++P+ +TF+++L AC+H+G +++G F LM + Y
Sbjct: 517 ISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYG 576
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ P L HY CM DL GR G L++A +FV++MP++ D +WG LL AC+IH N+E+ V+
Sbjct: 577 IRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVS 636
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
L ++E + YV ++NIYA G W+GV +R++ + +KK PG S + ++ K F
Sbjct: 637 DHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVF 696
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 255/499 (51%), Gaps = 23/499 (4%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
E + F I C K+ ++ +H +V S IF+ +++ YA + A
Sbjct: 40 EKREIDFNRIFLYCTKVH---LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARL 96
Query: 111 LFDKMPDRDVASWNAMIVGFAQMG-FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
FD++ +DV +WN+MI +A++G F V C + +Q+D T + +A
Sbjct: 97 TFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRA---CG 153
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+L + VH + +G + DV + ++I Y++ + +A +F + +R + +WN++
Sbjct: 154 NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMM--IRDIGTWNAM 211
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G K ++L + M + D T+ SLL CV + ++ G L+H + I G
Sbjct: 212 ISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGL 271
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ D+ V N LI+MY+K G++ SA +F+ M R VSW ++++ + Q AL ++
Sbjct: 272 EFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNK 331
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDM 403
M + G VPDL+T++S+ S A ELG + + + G + ++ + NA+IDM
Sbjct: 332 MHSIGVVPDLLTLVSL-----ASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDM 386
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRVT 462
Y+K G I AR++F LP K V+SW ++I G + NG EA+D++ M PN+ T
Sbjct: 387 YAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGT 446
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
++++L A + G L++G + K + + ++ +C+ D+ G+ GKL +AL +
Sbjct: 447 WVSILTAHSQLGALKQGMKAHGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADALSLFYEV 505
Query: 523 PIKSDAGIWGTLLCACKIH 541
P +S W ++ +H
Sbjct: 506 PHQSSVS-WNAIISCHGLH 523
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 205/658 (31%), Positives = 333/658 (50%), Gaps = 66/658 (10%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + + + L + M + + TF F+ AC K D +HG I+
Sbjct: 101 WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F + + ++ +Y+KC +L +LF+KM RDV SWN MI + G + L
Sbjct: 161 KCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALD 220
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV--------------- 186
LF M + G+ D +T++ L K L + K +H + + +
Sbjct: 221 LFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYS 280
Query: 187 ------------------DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ DV + T +S Y K N + A +F + E R++VSW +
Sbjct: 281 KCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNE--RSLVSWTT 338
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
++ G G + +SL ++ M ++ PD +V++LS+CV E GR VH+ + YG
Sbjct: 339 MMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYG 398
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLF---------------DGMC-----DRTR---- 324
+D + N L+ +Y+KCG +D A F DG C D+ R
Sbjct: 399 MLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFN 458
Query: 325 -------VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
VSW M++ Y + +E+ +F M+++ PD T++S++S C + GAL
Sbjct: 459 KIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNH 518
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G W + Y + + M+ ALIDMY KCG + A E+F + EK V WT M+A A+
Sbjct: 519 GIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAM 578
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G+ +EA+DL+ +M E ++P+ VTF+A+L AC+H G +++G+ YFN + Y + P ++
Sbjct: 579 EGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIH 638
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY CM DLLGR G L+E + F++ MPI+ D IW +L+ AC+ H N+E+ E +L E+
Sbjct: 639 HYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEI 698
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+P + +V ++NIYA GRWD V+ +RT + V K PG +++ NG F +
Sbjct: 699 DPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASN 756
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/542 (24%), Positives = 248/542 (45%), Gaps = 71/542 (13%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ K+C+ + +F IH H++ + D + + ++ + LDCA+++ + +
Sbjct: 41 LLKSCSNIREF---SPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
WN ++ + G ++VL +Y+M G+ D T L A + L VH
Sbjct: 98 SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+ G + S+ N + Y+KC LK +F + R V+SWN++I +
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTH--RDVISWNTMISCYVLKGMY 215
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
++L+ + M+ G PD T+VSL+S+C + L G+ +H + + + S++N L
Sbjct: 216 REALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCL 275
Query: 300 ISMYSKCG---------------------------------DIDSARFLFDGMCDRTRVS 326
+ MYSKCG ID AR LFD M +R+ VS
Sbjct: 276 VDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVS 335
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
WT M+SGY Q G E+L LF M +PD V +++++S C +LG+ +
Sbjct: 336 WTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIV 395
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGD-------------------------------ARE 415
+ G+ + + NAL+D+Y+KCG + + AR+
Sbjct: 396 TYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARD 455
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
F +PEK +VSW TM+ + F E+ ++F +M +++P++ T +++L +C G
Sbjct: 456 FFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGA 515
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L G + N+ + ++ + + + D+ G+ G ++ A + + I+ + +W ++
Sbjct: 516 LNHGI-WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMM 573
Query: 536 CA 537
A
Sbjct: 574 AA 575
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 148/337 (43%), Gaps = 14/337 (4%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++ LL SC + + +H+H I D + + +++ ++D A +
Sbjct: 38 IIDLLKSC---SNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSH 94
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ + W ++ ++G E L ++ M G + D+ T +I C ++ ++LG
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSE 154
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G N + N L+ +YSKCG + + +LF + + V+SW TMI+ L G
Sbjct: 155 VHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGM 214
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG--WGYFNLMTKVYQVNPELNH 498
+ EALDLF +M+ + P+ +T ++++ C LE G + + K++ LN
Sbjct: 215 YREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLN- 273
Query: 499 YSCMADLLGRKGKLKEALDFVQSM-PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE- 556
C+ D+ + GK+ EA + + D +W TL+ I+ A +LF+
Sbjct: 274 --CLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKID----KARQLFDK 327
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
+ S + M + Y GG + L M+ V
Sbjct: 328 MNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENV 364
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 116/242 (47%), Gaps = 34/242 (14%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
NKI ++ WN+ + V + +++ +F +M+ ++++P+ T + +CAK+
Sbjct: 457 FNKIPEKDIVS-WNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGA 515
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ ++ +I K+ D + T ++DMY KC ++ AY++F ++ +++V W AM+
Sbjct: 516 LNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAA 575
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKS------ 176
+A G + + L+ M G++ D VT + L A H K+ + L+S
Sbjct: 576 YAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIP 635
Query: 177 -VHSFGIHIG-------------------VDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+H +G + ++ DVS+ ++ + A +++++AE F+ +
Sbjct: 636 TIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQL 695
Query: 217 EE 218
E
Sbjct: 696 IE 697
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 205/614 (33%), Positives = 319/614 (51%), Gaps = 71/614 (11%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+Y + +H ++KS F ++IF+Q ++D Y+KC L+ ++FDKMP R++ +WN+++ G
Sbjct: 37 IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96
Query: 131 AQMGFL-------------------------------EKVLCLFYNMRLVGIQADFVTVM 159
++GFL E+ LC F M G + +
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
+ A ++ VHS +DV + + + Y+KC ++ A+ VF E G
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD--EMG 214
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
R VVSWNS+I ++L+ ++ M+ PD T+ S++S+C A+ G+
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 280 VHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM------------------- 319
VH + + D+ + N + MY+KC I ARF+FD M
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 320 ------------CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+R VSW A+I+GY Q G+ +EAL LF ++ P + +++
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 368 GCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDMYSKCGSIGDARELFYALP 421
C L LG + G K D++ V N+LIDMY KCG + + +F +
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
E+ VSW MI G A NG EAL+LF +M+E +P+ +T + VL AC HAGF+E+G
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YF+ MT+ + V P +HY+CM DLLGR G L+EA ++ MP++ D+ IWG+LL ACK+H
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
RNI +G+YVA +L E+EP ++ PYV ++N+YA G+W+ V N+R M++ V K PG S
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 602 VHINGKTCTFTVED 615
+ I G F V+D
Sbjct: 635 IKIQGHDHVFMVKD 648
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 233/475 (49%), Gaps = 44/475 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + +AL F M K N +F + AC+ L+D +H I
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KSPF SD+++ + +VDMY+KC ++ A ++FD+M DR+V SWN++I F Q G + L
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISAY 200
+F M ++ D VT+ + A + + + VH + + + D+ + N ++ Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 201 AKCNDLKMAELVFRGI-----------------------------EEGLRTVVSWNSIIG 231
AKC+ +K A +F + + R VVSWN++I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G T + +++L+ + + + P + ++L +C L G H H + +GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 292 ------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
D+ V N+LI MY KCG ++ +F M +R VSW AMI G+AQ G +EAL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG---LKDNVMVCNALI 401
LF M +GE PD +T++ ++S CG +G +E G+ +F + G L+D+ ++
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY---TCMV 536
Query: 402 DMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
D+ + G + +A+ + +P + V W +++A C ++ + +++E++
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 591
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 9/176 (5%)
Query: 1 MAASSLPPRL--NKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFP 58
MAAS+ RL K+ + ++ WN+ I E +AL LF +K+ + P + +F
Sbjct: 332 MAASTKAARLMFTKMAERNVVS-WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPF------WSDIFVQTTMVDMYAKCDRLDCAYKLF 112
I KACA L++ H H++K F DIFV +++DMY KC ++ Y +F
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
KM +RD SWNAMI+GFAQ G+ + L LF M G + D +T++G+ A HA
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 202/597 (33%), Positives = 327/597 (54%), Gaps = 7/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V+ +++ +AL LF +M+ ++++ + K C ++LY +HG
Sbjct: 83 WTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFS 142
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK+ + +FV + ++DMY K + + K+FD+MP R+ +W A+I G + G+ E L
Sbjct: 143 VKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGL 202
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M ++ D +A+ + L+ +S+H+ + G D + V N+ + Y
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMY 262
Query: 201 AKCNDLKMAELVFRGIEEGLRT--VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
KC L FR +RT VVSW +I+ K D L ++ M P+
Sbjct: 263 NKCGKLDYGLHTFRK----MRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNE 318
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +++S C L G +H+H + GF +SV N+++++YSKCG++ S +F
Sbjct: 319 YTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCS 378
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R ++W+ +I+ Y+Q G +EA M + G P+ + S++S CG LE G
Sbjct: 379 MKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG 438
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K + S GL+ MVC+ALI MY+KCGSI +A ++F + ++SWT MI+G A +
Sbjct: 439 KQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEH 498
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EA++LF + ++ LRP+ VTF+ VL AC+HAG ++ G+ YFN M+K Y + P H
Sbjct: 499 GHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEH 558
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM DLL R G+L +A ++SMPI+ D +W TLL AC+IH +++ G+ A + +L+
Sbjct: 559 YGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLD 618
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P+ A ++ +ANI+A G+W AN+R +MK V K PG S V + F D
Sbjct: 619 PNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGD 675
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 194/432 (44%), Gaps = 10/432 (2%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D+ + + K + L A LFD++P RD SW +I G+ + L LF MR
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 148 LVG-IQAD-FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
L ++ D F+ +GL + +L ++H F + G+ V V + + Y K +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYL-YGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGE 166
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+ + VF E R V+W ++I G + L ++ M D L
Sbjct: 167 IGRSCKVFD--EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
+ AL GR +H+ + GFD + V N+L +MY+KCG +D F M V
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVV 284
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SWT +++ Y Q G D L+ F M A+ +P+ T ++IS C L+ G+ +
Sbjct: 285 SWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHV 344
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
G + + V N+++ +YSKCG + ++F ++ + +++W+T+IA + G EA
Sbjct: 345 LCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAF 404
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
+ +M +PN +VL C LE+G L V V E C A +
Sbjct: 405 EYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG---KQLHAHVLSVGLEQTSMVCSALI 461
Query: 506 L--GRKGKLKEA 515
+ + G + EA
Sbjct: 462 IMYAKCGSIAEA 473
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R+ + W + + + + L F+RM+ +++ PN TF + CA + + +
Sbjct: 279 RTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGE 338
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H H++ F + + V +++ +Y+KC L K+F M RD+ +W+ +I ++Q+G
Sbjct: 339 QLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVG 398
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ E+ MR G + + + + L K +H+ + +G++ VC+
Sbjct: 399 YGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCS 458
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I YAKC + A +F ++ ++SW ++I G +++ + ++ G
Sbjct: 459 ALIIMYAKCGSIAEASKIF--MDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGL 516
Query: 255 RPDVTTVVSLLSSC 268
RPD T + +L++C
Sbjct: 517 RPDSVTFIGVLTAC 530
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 120/270 (44%), Gaps = 7/270 (2%)
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
P L L + H+ +D++ N + + K + AR LFD + R VSWT +
Sbjct: 27 PRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNI 86
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM-ISGCGQSGALELGKWFDNYACSGG 389
ISGY D EALRLF M E+ +LS+ + CG G ++ G
Sbjct: 87 ISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTG 146
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L ++V V +AL+DMY K G IG + ++F +P + V+WT +I G G L F
Sbjct: 147 LVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFS 206
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLG 507
M + + + L+A +G L G ++ T+ + + N + + + +
Sbjct: 207 GMGRSKVEYDSYAYAIALKASADSGALNHG---RSIHTQTLKKGFDENSFVANSLTTMYN 263
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ GKL L + M D W T++ A
Sbjct: 264 KCGKLDYGLHTFRKMRTL-DVVSWTTIVTA 292
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 329/591 (55%), Gaps = 18/591 (3%)
Query: 33 NEA-HKALLLFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
NE+ H +L +F ++K+ D++PN+ T+ F A + D +IHG + S++
Sbjct: 96 NESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELL 155
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLV 149
+ + +V MY K R++ A K+FD+MP++D WN MI G+ + + + +F ++
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
+ D T++ + A + L L +HS G + V +IS Y+KC +KMA
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMA 275
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+FR +V++N++I G T + + SL+ ++ ++ G + +T+VSL+
Sbjct: 276 STLFREFRRP--DIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVP--- 330
Query: 270 CPEALVQGRL-----VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
V G L +H + + F SV L ++YSK +I+SAR LFD +++
Sbjct: 331 -----VSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
SW AMISGY Q G ++A+ LF M+ + P+ VT+ ++S C Q GAL LGKW +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
S + ++ V ALI MY+KCGSI +AR LF +P+K V+W TMI+G L+G EA
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEA 505
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L +F +M+ + P VTFL VL AC+HAG +++G FN M Y P + HY+C+ D
Sbjct: 506 LTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVD 565
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
+LGR G L+ AL F+++MPI+ +W TLL AC+IH++ + V+ +LFEL+P +
Sbjct: 566 ILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+V ++NI++ + A +R K+ ++ K PG +L+ I FT D
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGD 676
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ I A+ LFR M+ ++ PN +T I ACA+L + +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + F S I+V T ++ MYAKC + A +LFD MP ++ +WN MI G+ G +
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQ 503
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L +F M GI VT + + A HA
Sbjct: 504 EALTIFSEMLNSGIAPTPVTFLCVLYACSHA 534
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
H+ + +GF D+S++ L S G I AR +F + + ++ G++
Sbjct: 39 THAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 340 LDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+L +F + + ++ P+ T IS G A G +++ +
Sbjct: 99 PHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGS 158
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLR 457
++ MY K + DAR++F +PEK + W TMI+G N +VE++ +F ++ E R
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+ T L +L A L G +L TK
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 210/623 (33%), Positives = 329/623 (52%), Gaps = 19/623 (3%)
Query: 2 AASSLPPRLN--KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPF 59
++SSLP + Y+ S+IN E + E H+AL + KK IEP+ P
Sbjct: 24 SSSSLPTEKSPSTSYQRSSINTQLDGSLEPIKPLEFHEALCFIKEEKK--IEPS-YYLPL 80
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ + C K + +Q+IH HI+K+ D+ V T++V++YAKC + A K+FD + R+
Sbjct: 81 L-QECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRN 139
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V +W A++ G+ Q + +F +M G T+ A + L K +H+
Sbjct: 140 VVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHA 199
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
F I +D D S+ N S Y+K L + VF+ I G + V+SW ++I C K
Sbjct: 200 FVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSI--GEKNVISWTAVISACGENGKA 257
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
L F+ M+ + +P+ T+ ++LS C ALV GRLVHS I G+ ++ + N++
Sbjct: 258 AMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSI 317
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-----------EALRLFF 348
+ +Y KCG +D A+ LF M V+W AMISG+AQ DL EAL +F
Sbjct: 318 MYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFL 377
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
+ G+ PDL T+ S+++ C + AL G+ G +V+V AL++MYSKCG
Sbjct: 378 ELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCG 437
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
SIG A + F + +T++SWTTMI G A +G +AL LF M +RPN++TF+ VL
Sbjct: 438 SIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLA 497
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC H+G +++ GYF +M K Y++ P ++HY C+ + + +L EA D + M +
Sbjct: 498 ACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSE 557
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM 588
IW L+ C+ E+G Y A +L +L+ YV + N+Y RW V+ +R +M
Sbjct: 558 FIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVSRVRKLM 617
Query: 589 KRNQVKKFPGQSLVHINGKTCTF 611
K ++ KF S + I K +F
Sbjct: 618 KEEKLGKFNDWSWITIKEKIHSF 640
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/559 (35%), Positives = 313/559 (55%), Gaps = 7/559 (1%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMP 116
I + C + D IH H++K+ V +++ A +D A +F ++
Sbjct: 29 LILEQCKTIRDL---NEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQID 85
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+ D ++N MI GF + + LF M +Q D T + + + LS +
Sbjct: 86 EPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQ 145
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+H+ + G + V NT I YA C ++++A VF + E R V +WNS+ G T
Sbjct: 146 IHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSE--RNVRTWNSMFAGYTKS 203
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+++ + + M+ R D T+VS+L++C L G ++ + G + ++I
Sbjct: 204 GNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI 263
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+L+ MY+KCG +D+AR LFD M R V+W+AMISGY+Q EAL LF M+ A
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+ +T++S++S C GALE GKW + +K V + AL+D Y+KCGS+ + E+
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F +P K V+SWT +I G A NG+ +AL+ F+ M+E ++ PN VTF+ VL AC+HAG +
Sbjct: 384 FGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLV 443
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
++G F M++ + + P + HY CM D+LGR G ++EA F+++MPI+ +A IW TLL
Sbjct: 444 DEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLA 503
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
+CK+H+N+EIGE +L LEP + Y+ ++NIYA GRW+ +R MK +KK
Sbjct: 504 SCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKT 563
Query: 597 PGQSLVHINGKTCTFTVED 615
PG SL+ ++G F ED
Sbjct: 564 PGCSLIELDGVIHEFFAED 582
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 223/419 (53%), Gaps = 4/419 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N IR K H+A+LLF+ M +N ++P+ TFP I K C++L + IH I+
Sbjct: 92 YNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIM 151
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S FV+ T++ MYA C ++ A ++FD+M +R+V +WN+M G+ + G E+V+
Sbjct: 152 KCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVK 211
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ M + I+ D VT++ + A L L + ++ + G+ + ++ + + YA
Sbjct: 212 LFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYA 271
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F ++ R VV+W+++I G + + ++L+ + M P+ T+
Sbjct: 272 KCGQVDTARRLFDQMDR--RDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITM 329
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS+LSSC AL G+ VH L V++ L+ Y+KCG ++S+ +F M
Sbjct: 330 VSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPV 389
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-W 380
+ +SWT +I G A G +AL F+ M P+ VT + ++S C +G ++ G+
Sbjct: 390 KNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL 449
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
F + + G++ + ++D+ + G I +A + +P + V W T++A C ++
Sbjct: 450 FVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVH 508
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 174/382 (45%), Gaps = 20/382 (5%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WNS + + LF M + DI + +T + AC +L+D + I+
Sbjct: 190 VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINR 249
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++ + + + T++VDMYAKC ++D A +LFD+M RDV +W+AMI G++Q +
Sbjct: 250 YVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCRE 309
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF+ M+ I + +T++ + + L K VH F + V++ +
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMD 369
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC ++ + VF + ++ V+SW +I G + +L ++ M+ P+
Sbjct: 370 FYAKCGSVESSIEVFGKMP--VKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPND 427
Query: 259 TTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFLF 316
T + +LS+C + +GR L S +G + + ++ + + G I+ A +F+
Sbjct: 428 VTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIK 487
Query: 317 DGMCDRTRVSWTAMISGYAQKGDL---DEALRLFFAMEA--AGEVPDLVTVLSMISGCGQ 371
+ V W +++ ++ +E+L+ +E +G+ L + + +
Sbjct: 488 NMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASV----- 542
Query: 372 SGALELGKWFDNYACSGGLKDN 393
G+W D G +K+
Sbjct: 543 ------GRWEDALKVRGEMKEK 558
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/542 (37%), Positives = 309/542 (57%), Gaps = 5/542 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRL-DCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HGH +K+ F +D+ + T +DMY KC+ L DC+ +LF+ +P+ ++ S+NA+IVG+A+
Sbjct: 233 LHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSD 292
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L +F ++ G+ D V++ G +A A+ L L+ VH + +++ V
Sbjct: 293 KGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVA 351
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N + Y KC L A LVF E R VSWN+II + +L+ + M+ G
Sbjct: 352 NAILDMYGKCGALVEACLVFE--EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG 409
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T S+L +C +AL G +H+ I LD V LI MYSKCG ++ A
Sbjct: 410 MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAE 469
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
L D + ++T VSW A+ISG++ + +EA + F M G PD T +++ C
Sbjct: 470 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 529
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+ELGK L+ + + + L+DMYSKCG++ D + +F P + V+W M+
Sbjct: 530 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 589
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A +G EAL +F M +++PN TFLAVL+AC H G +EKG YF+ M Y ++
Sbjct: 590 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 649
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P+L HYSC+ D++GR G++ +AL+ ++ MP ++DA IW TLL CKIH N+E+ E AY
Sbjct: 650 PQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYS 709
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+ +LEP +A YV ++NIYA G W+ V LR MM+ N +KK PG S + I + F V
Sbjct: 710 ILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLV 769
Query: 614 ED 615
D
Sbjct: 770 GD 771
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 232/460 (50%), Gaps = 7/460 (1%)
Query: 1 MAASSLPPRLNKIYRS---STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTF 57
M ++L N+++ S + +N+ I ++ +AL +FR ++K+ + + ++
Sbjct: 257 MKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 316
Query: 58 PFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
+ACA + L +HG +KS S+I V ++DMY KC L A +F++M
Sbjct: 317 SGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 376
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
RD SWNA+I Q G EK L LF M G++ D T + +A + L+ +
Sbjct: 377 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEI 436
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H+ I + D V I Y+KC ++ AE + + E +TVVSWN+II G +
Sbjct: 437 HNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAE--QTVVSWNAIISGFSLQK 494
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+ +++ + M+ G PD T ++L +C + G+ +H+ I D + +
Sbjct: 495 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 554
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
TL+ MYSKCG++ + +F+ +R V+W AM+ GYAQ G +EAL++F M+ P
Sbjct: 555 TLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKP 614
Query: 358 DLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
+ T L+++ CG G +E G +F + + GL + + ++D+ + G + A EL
Sbjct: 615 NHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL 674
Query: 417 FYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+P E V W T+++ C ++G A + +++L+
Sbjct: 675 IEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLE 714
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 153/579 (26%), Positives = 253/579 (43%), Gaps = 77/579 (13%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TF I + C+ + H ++ + F +FV ++ MY KC L A+K+FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA----DFV-----TVMGLTQAAI 166
P RD SWNAM+ G+A G + LF M G DF TV T A+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 167 HAKHLSLLK------SVHSFGIHIGVDADVSVCNTWISAYAKC----NDLKMAELVFRGI 216
K S L+ +H + +G D DV + + YAKC +DL+ +F+ +
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 217 EE-----------GLRT-------------------------------------VVSWNS 228
++ L+T + S+N+
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
II G DK ++L +R + G D ++ +C + ++G VH +
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
++ V N ++ MY KCG + A +F+ M R VSW A+I+ + Q G+ ++ L LF
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M +G PD T S++ C AL G N + + V ALIDMYSKCG
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCG 463
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ A +L L E+TVVSW +I+G +L + EA F +M+E+ + P+ T+ +L
Sbjct: 464 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 523
Query: 469 ACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
C + +E G + ++ K Q + ++ S + D+ + G +++ + P + D
Sbjct: 524 TCANLVTVELGKQIHAQIIKKELQSDAYIS--STLVDMYSKCGNMQDFQLIFEKAPNR-D 580
Query: 528 AGIWGTLLCACKIH----RNIEIGEYVAYRLFELEPHSA 562
W ++C H ++I EY+ +L ++P+ A
Sbjct: 581 FVTWNAMVCGYAQHGLGEEALKIFEYM--QLENVKPNHA 617
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 216/605 (35%), Positives = 326/605 (53%), Gaps = 23/605 (3%)
Query: 19 INQWNSQIREAVDKNEAHKAL----LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
I WNS I V + H+A+ LF + P+ TFP I KAC L D +
Sbjct: 85 IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H + K F D+FV ++V +Y++ LD A+K+F MP +DV SWNAMI GF Q G
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
L + M+ G++ D +TV + + + +H + G+D+DV V N
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I+ Y+K L+ A++VF +E +R +VSWNSII + +L F++ M G
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQME--VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-------DLDVSVINTLISMYSKCG 307
RPD+ TVVSL S L R+ S GF D DV + N L++MY+K G
Sbjct: 320 RPDLLTVVSLTSIF---SQLSDQRISRSI---LGFVIRREWLDKDVVIGNALVNMYAKLG 373
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VPDLVTVLSMI 366
++ A +FD + + +SW +++GY Q G EA+ + ME + +P+ T +S+I
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
GAL+ G L +V V LID+Y KCG + DA LFY +P T V
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV 493
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
W +IA ++G EAL LF M+ ++ + +TF+++L AC+H+G +++G F++M
Sbjct: 494 PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIM 553
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
K Y + P L HY CM DLLGR G L++A + V++MPI+ DA IWG LL ACKI+ N E+
Sbjct: 554 QKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAEL 613
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
G + RL E++ + YV ++NIYA +W+GV +R++ + ++K PG S V +
Sbjct: 614 GTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGS 673
Query: 607 KTCTF 611
K F
Sbjct: 674 KAEVF 678
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 241/464 (51%), Gaps = 21/464 (4%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG-FLEKVLCLFYNM 146
+I + T ++++Y + + FD + +++ SWN++I + + G + E + C+
Sbjct: 53 NIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLF 112
Query: 147 RLVG---IQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYA 201
+ G ++ DF T + +A + SL+ K VH +G + DV V + + Y+
Sbjct: 113 SMCGGGHLRPDFYTFPPILKACV-----SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYS 167
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ L +A VF ++ ++ V SWN++I G +L M +G + D TV
Sbjct: 168 RYGVLDVAHKVF--VDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITV 225
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L C + ++ G L+H H + +G D DV V N LI+MYSK G + A+ +FD M
Sbjct: 226 ASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW ++I+ Y Q D ALR F M+ G PDL+TV+S+ S Q + +
Sbjct: 286 RDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345
Query: 382 DNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ L +V++ NAL++MY+K G + A +F LP K +SW T++ G NG
Sbjct: 346 LGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGL 405
Query: 441 FVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EA+D ++ M E D PN+ T+++++ A +H G L++G + K+ + + L+ +
Sbjct: 406 ASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG---MKIHAKLIKNSLYLDVF 462
Query: 500 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+C+ DL G+ G+L++A+ +P + + W ++ + IH
Sbjct: 463 VATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIH 505
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+L +SCV A + +H+ + +G ++ + LI++Y GDI +R FD + +
Sbjct: 27 ALFNSCVNVNAT---KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKK 83
Query: 323 TRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
SW ++IS Y + G EA+ F+M G + PD T ++ C +L G
Sbjct: 84 NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDG 140
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K G +D+V V +L+ +YS+ G + A ++F +P K V SW MI+G N
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G AL + ++M ++ + +T ++L C + + G +L + ++ ++
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV-LIHLHVLKHGLDSDVFV 259
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + ++ + G+L++A M ++ D W +++ A
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAA 297
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/598 (33%), Positives = 322/598 (53%), Gaps = 3/598 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN + E ++L LF +M + I P+ + K LS + H
Sbjct: 381 NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAH 440
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+IVK F + V ++ YAK + + A +F++MP +D SWN++I G + G
Sbjct: 441 GYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNS 500
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF M G + D VT++ + A +++ + VH + + G+ + S+ N +
Sbjct: 501 EAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALL 560
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+ C+D + +FR + G + VVSW ++I FD + M+ DG RPD
Sbjct: 561 DMYSNCSDWQSTNQIFRSM--GQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPD 618
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
V V S L + E+L QG+ VH + I G + + V N L+ MY KC +++ AR +FD
Sbjct: 619 VFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFD 678
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ ++ +SW +I GY++ +E+ LF M P+ VT+ ++ +LE
Sbjct: 679 RVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFR-PNAVTMTCILPAAASISSLER 737
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ YA G ++ NAL+DMY KCG++ AR LF L +K ++SWT MIAG +
Sbjct: 738 GREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGM 797
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G A+ LF QM + P+ +F A+L AC H+G +G +F M K Y++ P+L
Sbjct: 798 HGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLK 857
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ DLL R G LKEAL+F++SMPI+ D+ IW +LL C+IH+N+++ E VA ++F+L
Sbjct: 858 HYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKL 917
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP + YV +ANIYA RW+ V L+ + +++ G S + + K F ++
Sbjct: 918 EPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADN 975
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 224/484 (46%), Gaps = 17/484 (3%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
+PP+ ++ + W S + + +A+ LFR+M+ + P+ + K +
Sbjct: 162 MPPQ------AADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVS 215
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
L ++IHG + K V ++ +Y++C R++ A ++FD M RD SWN+
Sbjct: 216 SLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNS 275
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----G 181
MI G G+ + LF M G + VTV+ + A + + K+VH + G
Sbjct: 276 MIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSG 335
Query: 182 IHIGVDA------DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+ G+D+ D ++ + + Y KC D+ A VF + V WN I+GG
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHV-WNLIMGGYAK 394
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+F++SL+ + M G PD + LL C G + H + + GF +V
Sbjct: 395 VGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAV 454
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N LIS Y+K I A +F+ M + +SW ++ISG + G EA+ LF M G+
Sbjct: 455 CNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQ 514
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
D VT+LS++ C QS G+ Y+ GL + NAL+DMYS C +
Sbjct: 515 ELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQ 574
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F ++ +K VVSWT MI G F + L +M+ +RP+ + L A
Sbjct: 575 IFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDES 634
Query: 476 LEKG 479
L++G
Sbjct: 635 LKQG 638
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 33/435 (7%)
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+V Y KC L A +FD MP + DV W +++ +A+ G ++ + LF M+ G+
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D V + + L+ + +H +G+ +V N I+ Y++C ++ A V
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + R +SWNS+IGGC +++ + M G TV+S+L +C
Sbjct: 262 FDSMHP--RDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLG 319
Query: 273 ALVQGRLVHSH----GIHYGFDL------DVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+ G+ VH + G+ +G D D ++ + L+ MY KCGD+ SAR +FD M +
Sbjct: 320 YGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSK 379
Query: 323 TRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPD------LVTVLSMISGCGQSGAL 375
V W ++ GYA+ G+ +E+L LF M G PD L+ ++ +S C + G +
Sbjct: 380 GNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLS-CARDGLV 438
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G Y G VCNALI Y+K IGDA +F +P + +SW ++I+GC
Sbjct: 439 AHG-----YIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGC 493
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---WGY---FNLMTKV 489
+ NG EA++LF +M + VT L+VL AC + + G GY L+ +
Sbjct: 494 SSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGET 553
Query: 490 YQVNPELNHYSCMAD 504
N L+ YS +D
Sbjct: 554 SLANALLDMYSNCSD 568
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 22/214 (10%)
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD-----NYACSGGL 390
Q GDL ALRL + + G V D+ + ++ CG+ +LE K + A + G
Sbjct: 78 QAGDLAGALRL---LGSDGGV-DVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGG 133
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKT--VVSWTTMIAGCALNGEFVEALDLF 448
K +V+ L+ Y KCG +G+AR +F +P + V WT++++ A G+F EA+ LF
Sbjct: 134 KGSVL-GKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLF 192
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL-- 506
QM + P+ VL+ + G L +G L+ K+ L +A+ L
Sbjct: 193 RQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKL-----GLGQACAVANALIA 247
Query: 507 --GRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
R G++++A SM + DA W +++ C
Sbjct: 248 VYSRCGRMEDAARVFDSMHPR-DAISWNSMIGGC 280
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 315/595 (52%), Gaps = 2/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + V ++ A+ +F M + I+P F + AC + + +H +
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 228
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + D+F +VDMY K R+D A +F+KMPD DV SWNA+I G G + +
Sbjct: 229 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M+ G+ + + + +A A L + +H F I D+D + + Y
Sbjct: 289 ELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK + L A VF + R ++ WN++I GC++G + D++ + + + +G + TT
Sbjct: 349 AKNHFLDDAMKVFDWMSH--RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTT 406
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ ++L S EA R VH+ GF D V+N LI Y KC + A +F+
Sbjct: 407 LAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 466
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ T+MI+ +Q + A++LF M G PD + S+++ C A E GK
Sbjct: 467 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + NAL+ Y+KCGSI DA F +LPE+ VVSW+ MI G A +G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL+LF +M++ + PN +T +VL AC HAG +++ YFN M +++ ++ HYS
Sbjct: 587 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYS 646
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR GKL +A++ V SMP +++A +WG LL A ++H++ E+G+ A +LF LEP
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPE 706
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +V +AN YA G W+ VA +R +MK + +KK P S V + K TF V D
Sbjct: 707 KSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGD 761
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 207/420 (49%), Gaps = 4/420 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN+ I V H+A+ L +MK + + PN I KACA F + I
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 325
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG ++K+ SD ++ +VDMYAK LD A K+FD M RD+ WNA+I G + G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 385
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ +FY +R G+ + T+ + ++ + S + VH+ IG D V N
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I +Y KC+ L A VF G +++ S+I + D + ++ + M+ G P
Sbjct: 446 IDSYWKCSCLSDAIRVFEECSSG--DIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + SLL++C A QG+ VH+H I F D N L+ Y+KCG I+ A F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL- 375
+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++ C +G +
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAG 434
E ++F++ G+ + +ID+ + G + DA EL ++P + S W ++
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 683
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 198/395 (50%), Gaps = 8/395 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H +++KS F + + + ++ Y+KC R CA ++FD++PD SW++++ ++ G
Sbjct: 26 LHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ F+ MR G+ + + + + A+ L VH+ + G +DV V N
Sbjct: 84 PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ---LGAQVHAMAMATGFGSDVFVANA 140
Query: 196 WISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
++ Y + A VF E G R VSWN ++ D+ D++ + M++ G
Sbjct: 141 LVAMYGGFGFMDDARRVFD--EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+P ++++C + GR VH+ + G++ DV N L+ MY K G +D A
Sbjct: 199 QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 258
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+ M D VSW A+ISG G A+ L M+++G VP++ + S++ C +GA
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 318
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+LG+ + + + L+DMY+K + DA ++F + + ++ W +I+G
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISG 378
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
C+ G EA +F+ + + L NR T AVL++
Sbjct: 379 CSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 182/398 (45%), Gaps = 24/398 (6%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
MR G + +T QA + HL +LLKS G A S+ N IS Y+KC
Sbjct: 1 MRSAGTISQQLTRYAAAQALLPGAHLHANLLKS--------GFLA--SLRNHLISFYSKC 50
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
A VF I + VSW+S++ + ++ + M +G + +
Sbjct: 51 RRPCCARRVFDEIPDPCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD-GMCDR 322
+L CV P+A + G VH+ + GF DV V N L++MY G +D AR +FD +R
Sbjct: 109 VLK-CV-PDAQL-GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSER 165
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSW ++S Y + +A+++F M +G P +++ C S ++ G+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 225
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
G + +V NAL+DMY K G + A +F +P+ VVSW +I+GC LNG
Sbjct: 226 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--S 500
A++L QM L PN ++L+AC AG + G M K N + + Y
Sbjct: 286 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK---ANADSDDYIGV 342
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ D+ + L +A+ M + D +W L+ C
Sbjct: 343 GLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGC 379
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 325/594 (54%), Gaps = 4/594 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N + E + + L F M ++D+E + +TF + K+ Q +H +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ V ++++MY K + A +FD M +RD+ SWN++I G AQ G + +CL
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIH-AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F + G++ D T+ + +AA + LSL K VH I I +D V I AY+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ +K AE++F E +V+WN+++ G T +L + M G R D T+
Sbjct: 464 RNRCMKEAEILF---ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++ +C A+ QG+ VH++ I G+DLD+ V + ++ MY KCGD+ +A+F FD +
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V+WT MISG + G+ + A +F M G +PD T+ ++ ALE G+
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
A ++ V +L+DMY+KCGSI DA LF + + +W M+ G A +GE
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E L LF QM L ++P++VTF+ VL AC+H+G + + + + M Y + PE+ HYSC
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSC 760
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+AD LGR G +K+A + ++SM +++ A ++ TLL AC++ + E G+ VA +L ELEP
Sbjct: 761 LADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLD 820
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ YV ++N+YA +WD + RTMMK ++VKK PG S + + K F V+D
Sbjct: 821 SSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDD 874
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 235/537 (43%), Gaps = 56/537 (10%)
Query: 22 WNS------QIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
WNS Q E V +N +A LLFR ++++ + + +T + K C S+
Sbjct: 108 WNSILAAYAQSSECVVEN-IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
HG+ K D FV +V++Y K ++ LF++MP RDV WN M+ + +MGF
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ + L G+ + +T+ L + + G D+D
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARIS-------------------GDDSDAG---- 263
Query: 196 WISAYAKCNDL-KMAELVFR--GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ ++A ND ++E++FR G+ E L + ++ L + M+
Sbjct: 264 QVKSFANGNDASSVSEIIFRNKGLSEYL--------------HSGQYSALLKCFADMVES 309
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
D T + +L++ V ++L G+ VH + G DL ++V N+LI+MY K A
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ- 371
R +FD M +R +SW ++I+G AQ G EA+ LF + G PD T+ S++
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
L L K +A + V ALID YS+ + +A E+ + +V+W M
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAM 488
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+AG + + + L LF M + R + T V + C + +G K
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-G 547
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ +L S + D+ + G + A S+P+ D W T++ C IE GE
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC-----IENGE 598
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 194/424 (45%), Gaps = 48/424 (11%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F F+ A SD + + H I+ + F+ ++ MY+KC L A ++FDKMP
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 117 DRDVASWNAMIVGFAQ-----MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
DRD+ SWN+++ +AQ + +++ LF +R + +T+ + + +H+ ++
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+S H + IG+D D V ++ Y K +K +++F E R VV WN +
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFE--EMPYRDVVLWNLM-- 217
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
L Y M GF+ EA+ HS G++ ++
Sbjct: 218 -----------LKAYLEM---GFK---------------EEAIDLSSAFHSSGLNPN-EI 247
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM----ISGYAQKGDLDEALRLF 347
+ ++ + S G + S F D + VS +S Y G L+ F
Sbjct: 248 TLRLLARISGDDSDAGQVKS----FANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCF 303
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M + D VT + M++ + +L LG+ A GL + V N+LI+MY K
Sbjct: 304 ADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL 363
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G AR +F + E+ ++SW ++IAG A NG VEA+ LF Q++ L+P++ T +VL
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 468 QACT 471
+A +
Sbjct: 424 KAAS 427
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 149/328 (45%), Gaps = 6/328 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + ++ HK L LF M K ++ T + K C L + +H + +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + D++V + ++DMY KC + A FD +P D +W MI G + G E+
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MRL+G+ D T+ L +A+ L + +H+ + + D V + + YA
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F+ IE + + +WN+++ G + ++L ++ M G +PD T
Sbjct: 665 KCGSIDDAYCLFKRIE--MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ +LS+C LV H +H YG ++ + L + G + A L + M
Sbjct: 723 IGVLSAC-SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Query: 320 CDRTRVS-WTAMISGYAQKGDLDEALRL 346
S + +++ +GD + R+
Sbjct: 782 SMEASASMYRTLLAACRVQGDTETGKRV 809
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/597 (33%), Positives = 326/597 (54%), Gaps = 7/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V+ +++ +AL LF +M+ ++++ + K C ++LY +HG
Sbjct: 83 WTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFS 142
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK + +FV + ++DMY K + + K+FD+MP R+ +W A+I G + G+ E L
Sbjct: 143 VKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGL 202
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M ++ D +A+ + L+ +S+H+ + G D + V N+ + Y
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMY 262
Query: 201 AKCNDLKMAELVFRGIEEGLRT--VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
KC L FR +RT VVSW +I+ K D L ++ M P+
Sbjct: 263 NKCGKLDYGLHTFRK----MRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNE 318
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +++S C L G +H+H + GF +SV N+++++YSKCG++ S +F
Sbjct: 319 YTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCS 378
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R ++W+ +I+ Y+Q G +EA M + G P+ + S++S CG LE G
Sbjct: 379 MKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG 438
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K + S GL+ MVC+ALI MY+KCGSI +A ++F + ++SWT MI+G A +
Sbjct: 439 KQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEH 498
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EA++LF + ++ LRP+ VTF+ VL AC+HAG ++ G+ YFN M+K Y + P H
Sbjct: 499 GHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEH 558
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM DLL R G+L +A ++SMPI+ D +W TLL AC+IH +++ G+ A + +L+
Sbjct: 559 YGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLD 618
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P+ A ++ +ANI+A G+W AN+R +MK V K PG S V + F D
Sbjct: 619 PNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGD 675
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 194/432 (44%), Gaps = 10/432 (2%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D+ + + K + L A LFD++P RD SW +I G+ + L LF MR
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 148 LVG-IQAD-FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
L ++ D F+ +GL + +L ++H F + G+ V V + + Y K +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYL-YGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGE 166
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+ + VF E R V+W ++I G + L ++ M D L
Sbjct: 167 IGRSCKVFD--EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
+ AL GR +H+ + GFD + V N+L +MY+KCG +D F M V
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVV 284
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SWT +++ Y Q G D L+ F M A+ +P+ T ++IS C L+ G+ +
Sbjct: 285 SWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHV 344
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
G + + V N+++ +YSKCG + ++F ++ + +++W+T+IA + G EA
Sbjct: 345 LCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAF 404
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
+ +M +PN +VL C LE+G L V V E C A +
Sbjct: 405 EYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG---KQLHAHVLSVGLEQTSMVCSALI 461
Query: 506 L--GRKGKLKEA 515
+ + G + EA
Sbjct: 462 IMYAKCGSIAEA 473
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R+ + W + + + + L F+RM+ +++ PN TF + CA + + +
Sbjct: 279 RTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGE 338
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H H++ F + + V +++ +Y+KC L K+F M RD+ +W+ +I ++Q+G
Sbjct: 339 QLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVG 398
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ E+ MR G + + + + L K +H+ + +G++ VC+
Sbjct: 399 YGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCS 458
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I YAKC + A +F ++ ++SW ++I G +++ + ++ G
Sbjct: 459 ALIIMYAKCGSIAEASKIF--MDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGL 516
Query: 255 RPDVTTVVSLLSSC 268
RPD T + +L++C
Sbjct: 517 RPDSVTFIGVLTAC 530
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 120/270 (44%), Gaps = 7/270 (2%)
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
P L L + H+ +D++ N + + K + AR LFD + R VSWT +
Sbjct: 27 PRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNI 86
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM-ISGCGQSGALELGKWFDNYACSGG 389
ISGY D EALRLF M E+ +LS+ + CG G ++ G
Sbjct: 87 ISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXG 146
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L ++V V +AL+DMY K G IG + ++F +P + V+WT +I G G L F
Sbjct: 147 LVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFS 206
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLG 507
M + + + L+A +G L G ++ T+ + + N + + + +
Sbjct: 207 GMGRSKVEYDSYAYAIALKASADSGALNHG---RSIHTQTLKKGFDENSFVANSLTTMYN 263
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ GKL L + M D W T++ A
Sbjct: 264 KCGKLDYGLHTFRKMRTL-DVVSWTTIVTA 292
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 315/595 (52%), Gaps = 2/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + V ++ A+ +F M + I+P F + AC + + +H +
Sbjct: 76 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 135
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + D+F +VDMY K R+D A +F+KMPD DV SWNA+I G G + +
Sbjct: 136 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 195
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M+ G+ + + + +A A L + +H F I D+D + + Y
Sbjct: 196 ELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 255
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK + L A VF + R ++ WN++I GC++G + D++ + + + +G + TT
Sbjct: 256 AKNHFLDDAMKVFDWMSH--RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTT 313
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ ++L S EA R VH+ GF D V+N LI Y KC + A +F+
Sbjct: 314 LAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 373
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ T+MI+ +Q + A++LF M G PD + S+++ C A E GK
Sbjct: 374 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 433
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + NAL+ Y+KCGSI DA F +LPE+ VVSW+ MI G A +G
Sbjct: 434 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 493
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL+LF +M++ + PN +T +VL AC HAG +++ YFN M +++ ++ HYS
Sbjct: 494 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYS 553
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR GKL +A++ V SMP +++A +WG LL A ++H++ E+G+ A +LF LEP
Sbjct: 554 CMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPE 613
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +V +AN YA G W+ VA +R +MK + +KK P S V + K TF V D
Sbjct: 614 KSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGD 668
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 207/419 (49%), Gaps = 4/419 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN+ I V H+A+ L +MK + + PN I KACA F + I
Sbjct: 173 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 232
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG ++K+ SD ++ +VDMYAK LD A K+FD M RD+ WNA+I G + G
Sbjct: 233 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 292
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ +FY +R G+ + T+ + ++ + S + VH+ IG D V N
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I +Y KC+ L A VF G +++ S+I + D + ++ + M+ G P
Sbjct: 353 IDSYWKCSCLSDAIRVFEECSSG--DIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 410
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + SLL++C A QG+ VH+H I F D N L+ Y+KCG I+ A F
Sbjct: 411 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 470
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL- 375
+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++ C +G +
Sbjct: 471 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 530
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIA 433
E ++F++ G+ + +ID+ + G + DA EL ++P + S W ++
Sbjct: 531 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 589
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 189/436 (43%), Gaps = 6/436 (1%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M+ + N P + K + D +H + + F SD+FV +V MY
Sbjct: 1 MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 105 LDCAYKLFDKM-PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+D A ++FD+ +R+ SWN ++ + + + +F M GIQ +
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A ++++ + VH+ + +G + DV N + Y K + +A ++F + + V
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDS--DV 175
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWN++I GC ++ M G P+V + S+L +C A GR +H
Sbjct: 176 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 235
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
I D D + L+ MY+K +D A +FD M R + W A+ISG + G DEA
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+F+ + G + T+ +++ A + A G + V N LID
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y KC + DA +F +++ T+MI + A+ LF +M+ L P+
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 415
Query: 464 LAVLQACTHAGFLEKG 479
++L AC E+G
Sbjct: 416 SSLLNACASLSAYEQG 431
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD-GMCDRTRVS 326
CV P+A + G VH+ + GF DV V N L++MY G +D AR +FD +R VS
Sbjct: 19 CV-PDAQL-GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVS 76
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W ++S Y + +A+++F M +G P +++ C S ++ G+
Sbjct: 77 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVV 136
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
G + +V NAL+DMY K G + A +F +P+ VVSW +I+GC LNG A++
Sbjct: 137 RMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 196
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMAD 504
L QM L PN ++L+AC AG + G M K N + + Y + D
Sbjct: 197 LLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK---ANADSDDYIGVGLVD 253
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ + L +A+ M + D +W L+ C
Sbjct: 254 MYAKNHFLDDAMKVFDWMSHR-DLILWNALISGC 286
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/656 (32%), Positives = 338/656 (51%), Gaps = 64/656 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN +R +++ +A+ + RM + +P++ T P+ KAC +L + HG I
Sbjct: 117 WNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLIC 176
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVASWNAMIVGFAQMGFLEK 138
+ F S++FV +V MY++ L+ A +FD++ + DV SWN+++ +
Sbjct: 177 CNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRT 236
Query: 139 VLCLFYNM------RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L LF M + ++D ++++ + A K L K +HS+ I G AD V
Sbjct: 237 ALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFV 296
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF------------- 239
CN I YAKC +K A VF +E + VVSWN+++ G T KF
Sbjct: 297 CNALIDTYAKCGSMKDAVNVFNVME--FKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKE 354
Query: 240 ----------------------DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
++L+ ++ MI G P+ T++SLLS+C AL QG
Sbjct: 355 NIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQG 414
Query: 278 RLVHSHGIH------------YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR- 324
H++ + G D+ V N LI MYSKC +AR +F+ + R R
Sbjct: 415 METHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERN 474
Query: 325 -VSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V+WT MI GYAQ GD ++AL+LF M + P+ T+ ++ C +L +GK
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQI 534
Query: 382 DNYACSGGLKDNVM--VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
Y ++ + V N LIDMYSKCG + AR +F ++P++ VSWT+M++G ++G
Sbjct: 535 HAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EALD+F +M + P+ ++FL +L AC+H+G +++G YF++M Y V HY
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHY 654
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C+ DLL R G+L +A +Q MP++ A IW LL AC++H N+E+ EY +L ++
Sbjct: 655 ACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKA 714
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y ++NIYA RW VA +R +MK++ +KK PG S V T +F V D
Sbjct: 715 ENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGD 770
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 14/267 (5%)
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
V WN ++ + D ++ M+ G +PD T+ L +C + G H
Sbjct: 115 VWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGL 174
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR---TRVSWTAMISGYAQKGDL 340
GF+ +V V N L++MYS+ G ++ A +FD + + +SW ++++ + + +
Sbjct: 175 ICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNP 234
Query: 341 DEALRLFFAM------EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
AL LF M +A E D++++++++ C AL K +YA G +
Sbjct: 235 RTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADA 294
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
VCNALID Y+KCGS+ DA +F + K VVSW M+ G +G+F A +LF M +
Sbjct: 295 FVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKE 354
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ + +T+ AV+ AG+ ++G+G
Sbjct: 355 NIPLDVITWSAVI-----AGYAQRGYG 376
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
+++ Y CG A + + + V W ++ + ++G LD A+ + M AG PD
Sbjct: 89 VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
T+ + CG+ + G F C G + NV VCNAL+ MYS+ GS+ DA +F
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208
Query: 419 ALPEK---TVVSWTTMIAGCALNGEFVEALDLFHQMMEL------DLRPNRVTFLAVLQA 469
+ K V+SW +++A ALDLF +M + + R + ++ + +L A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPA 268
Query: 470 C 470
C
Sbjct: 269 C 269
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLY 72
R + W I +++ AL LF M K + PN T I ACA LS
Sbjct: 471 RERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRM 530
Query: 73 SQMIHGHIVKSPFW--SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ IH ++ + + S FV ++DMY+KC +D A +FD MP R+ SW +M+ G+
Sbjct: 531 GKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGY 590
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G ++ L +F M+ G D ++ + L A H+
Sbjct: 591 GMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 332/591 (56%), Gaps = 18/591 (3%)
Query: 33 NEA-HKALLLFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
NE+ H +L +F ++K+ D++PN+ T+ F A + D ++IHG V S++
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLV 149
+ + +V MY K R++ A K+FD+MP++D WN MI G+ + + + +F ++
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
+ D T++ + A + L L +HS G + V +IS Y+KC +KM
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+FR + +V++N++I G T + + SL+ ++ ++ G R +T+VSL+
Sbjct: 276 SALFREFRKP--DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP--- 330
Query: 270 CPEALVQGRL-----VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
V G L +H + + F SV L ++YSK +I+SAR LFD +++
Sbjct: 331 -----VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
SW AMISGY Q G ++A+ LF M+ + P+ VT+ ++S C Q GAL LGKW +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
S + ++ V ALI MY+KCGSI +AR LF + +K V+W TMI+G L+G+ EA
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L++F++M+ + P VTFL VL AC+HAG +++G FN M Y P + HY+CM D
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
+LGR G L+ AL F+++M I+ + +W TLL AC+IH++ + V+ +LFEL+P +
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+V ++NI++ + A +R K+ ++ K PG +L+ I FT D
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGD 676
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ I A+ LFR M+K++ PN +T I ACA+L + +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + F S I+V T ++ MYAKC + A +LFD M ++ +WN MI G+ G +
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDADVSVCNTW 196
+ L +FY M GI VT + + A HA + + + IH G + V
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 197 ISAYAKCNDLKMAELVFRG--IEEGLRTVVSWNSIIGGC 233
+ + L+ A IE G W +++G C
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIEPGSSV---WETLLGAC 599
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
H+ I +GF D+S++ L S G I AR +F + + ++ G++
Sbjct: 39 THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 340 LDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+L +F + + ++ P+ T IS G+ A G +++ +
Sbjct: 99 PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLR 457
++ MY K + DAR++F +PEK + W TMI+G N +VE++ +F ++ E R
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+ T L +L A L G +L TK
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 216/606 (35%), Positives = 326/606 (53%), Gaps = 23/606 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKAL----LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
I WNS I V + H+A+ LF + P+ TFP I KAC L D
Sbjct: 84 NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---G 140
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H + K F D+FV ++V +Y++ LD A+K+F MP +DV SWNAMI GF Q
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G L + M+ G++ D +TV + + + +H + G+D+DV V
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVS 260
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ Y+K L+ A++VF +E +R +VSWNSII + +L F++ M G
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQME--VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-------DLDVSVINTLISMYSKC 306
RPD+ TVVSL S L R+ S GF D DV + N L++MY+K
Sbjct: 319 IRPDLLTVVSLTSIF---SQLSDQRISRSI---LGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VPDLVTVLSM 365
G ++ A +FD + + +SW +++GY Q G EA+ + ME + +P+ T +S+
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSI 432
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
I GAL+ G L +V V LID+Y KCG + DA LFY +P T
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
V W +IA ++G EAL LF M+ ++ + +TF+++L AC+H+G +++G F++
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDI 552
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M K Y + P L HY CM DLLGR G L++A + V++MPI+ DA IWG LL ACKI+ N E
Sbjct: 553 MQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAE 612
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+G + RL E++ + YV ++NIYA +W+GV +R++ + ++K PG S V +
Sbjct: 613 LGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVG 672
Query: 606 GKTCTF 611
K F
Sbjct: 673 SKAEVF 678
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 241/464 (51%), Gaps = 21/464 (4%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG-FLEKVLCLFYNM 146
+I + T ++++Y + + FD + +++ SWN++I + + G + E + C+
Sbjct: 53 NIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLF 112
Query: 147 RLVG---IQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYA 201
+ G ++ DF T + +A + SL+ K VH +G + DV V + + Y+
Sbjct: 113 SMCGGGHLRPDFYTFPPILKACV-----SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYS 167
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ L +A VF ++ ++ V SWN++I G +L M +G + D TV
Sbjct: 168 RYGVLDVAHKVF--VDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITV 225
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L C + ++ G L+H H + +G D DV V N LI+MYSK G + A+ +FD M
Sbjct: 226 ASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW ++I+ Y Q D ALR F M+ G PDL+TV+S+ S Q + +
Sbjct: 286 RDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345
Query: 382 DNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ L +V++ NAL++MY+K G + A +F LP K +SW T++ G NG
Sbjct: 346 LGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGL 405
Query: 441 FVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EA+D ++ M E D PN+ T+++++ A +H G L++G + K+ + + L+ +
Sbjct: 406 ASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG---MKIHAKLIKNSLYLDVF 462
Query: 500 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+C+ DL G+ G+L++A+ +P + + W ++ + IH
Sbjct: 463 VATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIH 505
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+L +SCV A + +H+ + +G ++ + LI++Y GDI +R FD + +
Sbjct: 27 ALFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKK 83
Query: 323 TRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
SW ++IS Y + G EA+ F+M G + PD T ++ C +L G
Sbjct: 84 NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDG 140
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K G +D+V V +L+ +YS+ G + A ++F +P K V SW MI+G N
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G AL + ++M ++ + +T ++L C + + G +L + ++ ++
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV-LIHLHVLKHGLDSDVFV 259
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + ++ + G+L++A M ++ D W +++ A
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAA 297
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 314/594 (52%), Gaps = 30/594 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS I + ++AL LF++M + +P+ +T + ACA + + H + +
Sbjct: 320 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI 379
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ SDI V+ +++D+Y KC + A++ F + + Q+ L K
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQ 424
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M++ GI + T + + L + +H+ + G +V V + I YA
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 484
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A +FR ++E VVSW ++I G T DKF ++LN ++ M G + D
Sbjct: 485 KHGKLDHALKIFRRLKEN--DVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGF 542
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S +S+C +AL QGR +H+ G+ D+S+ N L+S+Y++CG + A FD +
Sbjct: 543 ASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYA 602
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW +++SG+AQ G +EAL +F M AG + T S +S + +GK
Sbjct: 603 KDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQI 662
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G V NALI +Y+KCG+I D +SW +MI G + +G
Sbjct: 663 HGMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCG 709
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL LF M +LD+ PN VTF+ VL AC+H G +++G YF M++ + + P+ HY+C
Sbjct: 710 FEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYAC 769
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G L A FV+ MPI+ DA +W TLL AC +H+NI+IGE+ A L ELEP
Sbjct: 770 VVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKD 829
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++N+YA+ G+WD R MMK VKK PG+S V ++ F D
Sbjct: 830 SATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGD 883
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 246/515 (47%), Gaps = 34/515 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA-KLSDFLYSQMIHGHI 80
WN + + + LFRRM ++E + F + + C+ F + + IH
Sbjct: 131 WNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKT 190
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ S F S F+ ++D+Y K L A K+F+ + RD SW AMI G +Q G+ E+ +
Sbjct: 191 ITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAM 250
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF + L A + K +H + G ++ VCN ++ Y
Sbjct: 251 LLFCQIVL--------------SACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLY 296
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++ +L AE +F + + R VS+NS+I G + +L ++ M D +PD T
Sbjct: 297 SRSGNLSSAEQIFHCMSQ--RDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVT 354
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V SLLS+C AL G+ HS+ I G D+ V +L+ +Y KC DI +A F +C
Sbjct: 355 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF--LC 412
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
Y Q +L+++ ++F M+ G VP+ T S++ C GA +LG+
Sbjct: 413 -------------YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQ 459
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G + NV V + LIDMY+K G + A ++F L E VVSWT MIAG + +
Sbjct: 460 IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDK 519
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
F EAL+LF +M + ++ + + F + + AC L++G + + + + +L+ +
Sbjct: 520 FTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGR-QIHAQSCLSGYSDDLSIGN 578
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ L R GK++EA + K + W +L+
Sbjct: 579 ALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSLV 612
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 213/450 (47%), Gaps = 38/450 (8%)
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++D Y L+CA +FD+MP R ++ WN + F + +V LF M ++ D
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162
Query: 155 -FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
+ + L + +A ++ +H+ I G ++ +CN I Y K L A+ VF
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
++ R VSW ++I G + ++++ + ++ LS+C E
Sbjct: 223 ENLKA--RDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LSACTKVEF 266
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
G+ +H + GF + V N L+++YS+ G++ SA +F M R RVS+ ++ISG
Sbjct: 267 FEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISG 326
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
AQ+G ++ AL LF M + PD VTV S++S C GAL GK F +YA G+ +
Sbjct: 327 LAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSD 386
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
++V +L+D+Y KC I A E F + LN F +F QM
Sbjct: 387 IVVEGSLLDLYVKCSDIKTAHEFFLCYGQLD-----------NLNKSF----QIFTQMQI 431
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGK 511
+ PN+ T+ ++L+ CT G + G + T+V + + N Y S + D+ + GK
Sbjct: 432 EGIVPNQFTYPSILKTCTTLGATDLGE---QIHTQVLKTGFQFNVYVSSVLIDMYAKHGK 488
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
L AL + + ++D W ++ H
Sbjct: 489 LDHALKIFRRLK-ENDVVSWTAMIAGYTQH 517
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 12 KIYR---SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
KI+R + + W + I ++ +AL LF+ M+ I+ +N+ F ACA +
Sbjct: 494 KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQ 553
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IH S + D+ + +V +YA+C ++ AY FD++ +D SWN+++
Sbjct: 554 ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVS 613
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GFAQ G+ E+ L +F M G++ + T AA + ++ + K +H G D+
Sbjct: 614 GFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDS 673
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V N I+ YAKC G +SWNS+I G + ++L +
Sbjct: 674 ETEVSNALITLYAKC---------------GTIDDISWNSMITGYSQHGCGFEALKLFED 718
Query: 249 MIYDGFRPDVTTVVSLLSSC 268
M P+ T V +LS+C
Sbjct: 719 MKQLDVLPNHVTFVGVLSAC 738
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 310/581 (53%), Gaps = 5/581 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+ L LF +MK ++ N ++ A A+ D + IHG ++ SDI V T ++
Sbjct: 312 EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLM 371
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MYAKC + A +LF + RD+ +W+A+I Q G+ E+ L LF M+ ++ + V
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+M + A L L KS+H F + +D+D+S +S YAKC A F +
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 217 EEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
R +V+WNS+I G GD ++ FY+ + PD T+V ++ +C L
Sbjct: 492 SS--RDIVTWNSLINGYAQIGDPYNAIDMFYK-LRLSAINPDAGTMVGVVPACALLNDLD 548
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGY 334
QG +H + GF+ D V N LI MY+KCG + SA FLF+ + V+W +I+ Y
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G EA+ F M P+ VT +S++ A G F G N
Sbjct: 609 MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT 668
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+V N+LIDMY+KCG + + +LF + K VSW M++G A++G A+ LF M E
Sbjct: 669 LVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQES 728
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++ + V+F++VL AC HAG +E+G F+ M+ Y + P+L HY+CM DLLGR G E
Sbjct: 729 QVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDE 788
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
L F++ MP++ DAG+WG LL +C++H N+++GE L +LEP + A +V +++IYA
Sbjct: 789 TLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQ 848
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
GRW R+ M +KK PG S V + K F V D
Sbjct: 849 SGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD 889
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 260/542 (47%), Gaps = 7/542 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS IR + ++AL ++ M + +EP+ TF F+ KAC + HG I
Sbjct: 97 WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D+F+ +VDMY+K L A ++FDKMP RDV +WNAMI G +Q + +
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F +M+LVG++ V+++ L ++ L +S+H G D +V N I Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIH--GYVFRRDFSSAVSNGLIDLYS 274
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+ +A VF + + + VSW +++ G + F + L + M R + +
Sbjct: 275 KCGDVDVARRVFDQMVD--QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS + L +G+ +H + D D+ V L+ MY+KCG+ + A+ LF G+
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG 392
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V+W+A+I+ Q G +EAL LF M+ P+ VT++S++ C L+LGK
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ + ++ AL+ MY+KCG A F + + +V+W ++I G A G+
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A+D+F+++ + P+ T + V+ AC L++G L+ K+ + + +
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNA 571
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC--KIHRNIEIGEYVAYRLFELEP 559
+ D+ + G L A D W ++ A H I + RL P
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 631
Query: 560 HS 561
+S
Sbjct: 632 NS 633
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 236/484 (48%), Gaps = 12/484 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
N L +P + +C L+ L IH I+ S F + T ++++Y+ + D A +F
Sbjct: 31 NYLHYPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVF 86
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D P+ WN+MI + + + L ++Y M G++ D T + +A A +L
Sbjct: 87 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
H G++ DV + + Y+K DLK A VF + + R VV+WN++I G
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK--RDVVAWNAMIAG 204
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS-HGIHYGFDL 291
+ + ++++F+R M G P ++++L +C + ++ L S HG + D
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG-ICKLSNIE--LCRSIHGYVFRRDF 261
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V N LI +YSKCGD+D AR +FD M D+ VSW M++GYA G E L LF M+
Sbjct: 262 SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 321
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ V+ +S ++ LE GK A + +++V L+ MY+KCG
Sbjct: 322 LGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETE 381
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A++LF+ L + +V+W+ +IA G EAL LF +M ++PNRVT +++L AC
Sbjct: 382 KAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACA 441
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
L+ G K ++ +L+ + + + + G AL M + D W
Sbjct: 442 DLSLLKLGKSIHCFTVKA-DMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTW 499
Query: 532 GTLL 535
+L+
Sbjct: 500 NSLI 503
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 4/297 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S I WNS I + + A+ +F +++ + I P+ T + ACA L+D
Sbjct: 493 SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTC 552
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFAQMG 134
IHG IVK F SD V+ ++DMYAKC L A LF+K +D +WN +I + Q G
Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ + F+ MRL + VT + + AA + + H+ I +G ++ V N
Sbjct: 613 HAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGN 672
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I YAKC L +E +F ++ + VSWN+++ G D ++ + M
Sbjct: 673 SLIDMYAKCGQLDYSEKLFNEMDH--KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQV 730
Query: 255 RPDVTTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ D + VS+LS+C + +GR + HS Y D+ ++ + + G D
Sbjct: 731 QIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 6/215 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + A +A+ F +M+ + PN++TF + A A L+ F H I+
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F S+ V +++DMYAKC +LD + KLF++M +D SWNAM+ G+A G ++ +
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV-HSFG--IHIGVDADVSVCNTWIS 198
LF M+ +Q D V+ + + A HA + + + HS HI D + C +
Sbjct: 721 LFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLL 780
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
A D + + +E W +++G C
Sbjct: 781 GRAGLFDETLGFIKVMPVEPDAGV---WGALLGSC 812
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/599 (33%), Positives = 320/599 (53%), Gaps = 33/599 (5%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ WN+ I ++ +A +F RM K + P+N TF + C L + +H
Sbjct: 139 NLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVH 198
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++ F D FV ++DMYAKCD + K+FD+M +R+ +WN++I AQ G
Sbjct: 199 SKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFN 258
Query: 138 KVLCLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
L LF M+ GIQ D T L + ++ + + +H+ I + ++ V
Sbjct: 259 DALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETE 318
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y++C L A+ +F + E R SWNS+I G + ++L ++ M +G +
Sbjct: 319 LVHMYSECGRLNYAKEIFNRMAE--RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 376
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD ++ S+LSSCV +GR +H+ + + + + L+ MY+KCG +D A +
Sbjct: 377 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKV 436
Query: 316 FDGMC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+D DR W ++++GYA KG E+ F M + D++T+++++
Sbjct: 437 YDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV------- 489
Query: 374 ALELGKWFDNYACSGGLKDNVMVCN-ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
N++V AL+DMYSKCG+I AR +F + K +VSW MI
Sbjct: 490 -------------------NLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMI 530
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G + +G EAL L+ +M + + PN VTFLA+L AC+H G +E+G F M + Y +
Sbjct: 531 SGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNI 590
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+ HY+CM DLLGR G+L++A +FV+ MPI+ + WG LL AC++H+++++G A
Sbjct: 591 EAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQ 650
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
RLFEL+P + PYV M+NIYA GRW V ++R MMK VKK PG S + IN + F
Sbjct: 651 RLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIF 709
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 240/490 (48%), Gaps = 16/490 (3%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLD- 106
+D+ P L + + + C + F + IH ++ + + D ++ T ++ +YA+ LD
Sbjct: 67 SDVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD 124
Query: 107 -C-AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
C A KLF++MP+R++ +WN MI+ +A++ + +F M +G+ D T +
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRV 184
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ K VHS I G D V N I YAKC+D + VF E G R V
Sbjct: 185 CGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFD--EMGERNQV 242
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHM--IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
+WNSII F+D+L + M DG +PD T +LL+ C QGR +H+
Sbjct: 243 TWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 302
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
H I ++ V L+ MYS+CG ++ A+ +F+ M +R SW +MI GY Q G+ E
Sbjct: 303 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 362
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
ALRLF M+ G PD ++ SM+S C + G+ N+ +++ ++ L+D
Sbjct: 363 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVD 422
Query: 403 MYSKCGSIGDARELFYAL--PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
MY+KCGS+ A +++ ++ W +++AG A G E+ + F +M+E D+ +
Sbjct: 423 MYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDV 482
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN-----HYSCMADLLGRKGKLKEA 515
+T + ++ L + +TK V +N ++ M + G KEA
Sbjct: 483 LTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEA 542
Query: 516 LDFVQSMPIK 525
L + MP K
Sbjct: 543 LILYEEMPKK 552
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 181/381 (47%), Gaps = 9/381 (2%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC---NDLKMAELVFRGIE 217
L Q I + KS+H+ I G + D + + YA+ +DL A +F +
Sbjct: 77 LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E R + +WN++I D + ++ + M+ G PD T S L C + G
Sbjct: 137 E--RNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGG 194
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+ VHS I GF D V N LI MY+KC D +S +FD M +R +V+W ++IS AQ
Sbjct: 195 KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQF 254
Query: 338 GDLDEALRLFFAMEAA--GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
G ++AL LF M+ + G PD T ++++ C G+ + + N++
Sbjct: 255 GHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNII 314
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V L+ MYS+CG + A+E+F + E+ SW +MI G NGE EAL LF QM
Sbjct: 315 VETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG 374
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++P+ + ++L +C +KG N + + + E + D+ + G + A
Sbjct: 375 IKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR-NTMEEEGILQVVLVDMYAKCGSMDYA 433
Query: 516 LD-FVQSMPIKSDAGIWGTLL 535
+ Q++ + +W ++L
Sbjct: 434 WKVYDQTIKKDRNTALWNSIL 454
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 318/590 (53%), Gaps = 15/590 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W IR +E + + RM+ E +N+ F + KAC++ +F + +H IV
Sbjct: 71 WKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIV 130
Query: 82 K--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K +P D FV T +VDMYAKC ++C+ +FD+ DR+V SW++MI G+ Q +
Sbjct: 131 KFGNP---DSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDG 187
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L LF MR I+A+ +T+ L A L K +H + I G++ + +
Sbjct: 188 LVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDL 247
Query: 200 YAKCNDLKMAELVF---RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
YAKC ++ A VF GI+ +VSW ++I G T +++L + P
Sbjct: 248 YAKCGVVRDARSVFDELHGID-----IVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLP 302
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T+ S+ SSC L GR +H I G D V N+L+ Y+KC AR++F
Sbjct: 303 NDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVF 361
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + DR V+W ++IS ++Q G EAL LF M +PD VT++S++S C AL+
Sbjct: 362 ETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQ 421
Query: 377 LGKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+G F YA GL NV V AL+ Y+KCG AR +F + +K+ V+W+ MI+G
Sbjct: 422 VGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGY 481
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ G +L +F M++ +L+PN F ++L AC+H G + +GW F ++ + Y + P
Sbjct: 482 GIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPS 541
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
HY+CM DLL R G+LKEALDF+Q MP++ D ++G L C +H ++GE R+
Sbjct: 542 TKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRML 601
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
EL P A YV M N+YA RW V +R +MK+ + K PG SL+ ++
Sbjct: 602 ELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMD 651
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 162/572 (28%), Positives = 262/572 (45%), Gaps = 58/572 (10%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H ++V D+ T +V +Y RLD A +FD +P D SW +I +
Sbjct: 24 MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + MR+ + D V + +A +++ + VH + G + D V
Sbjct: 84 FRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTG 142
Query: 196 WISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ YAKC +++ + VF +E L R V SW+S+I G + D L + M +
Sbjct: 143 LVDMYAKCGEIECSRSVF---DENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELI 199
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+ T+ L+ +C AL QG+ +H + I G +L ++ L+ +Y+KCG + AR
Sbjct: 200 EANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARS 259
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+FD + VSWTAMI GY Q G +EAL+LF E +P+ VT+ S+ S C Q
Sbjct: 260 VFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLN 319
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L LG+ + G +D + V N+L+D Y+KC DAR +F + ++ VV+W ++I+
Sbjct: 320 LNLGRSIHGLSIKLGSRDPI-VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISA 378
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-------LMT 487
+ NG EAL+LFHQM + P+ VT ++VL AC L+ G + L +
Sbjct: 379 FSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSS 438
Query: 488 KVYQVNPELNHY------------------------SCMADLLGRKGKLKEALDFVQSM- 522
VY L Y S M G +G + +L M
Sbjct: 439 NVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDML 498
Query: 523 --PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL--EPHSAAP----YVEMANIYAL 574
+K + I+ ++L AC H + IGE +RLF + + ++ P Y M ++ A
Sbjct: 499 KAELKPNEEIFTSILSACS-HTGM-IGE--GWRLFTMICQDYNLVPSTKHYTCMVDLLAR 554
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
GR + ++K P Q V + G
Sbjct: 555 AGRLKEALDF--------IQKMPVQPDVSLFG 578
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 156/325 (48%), Gaps = 3/325 (0%)
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+++ L +H++ + G+ D+S +S Y L +A LVF I +SW I
Sbjct: 17 NINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPH--PDFLSWKVI 74
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I +F D + FY M D +L +C +GR VH + +G
Sbjct: 75 IRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG- 133
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ D V L+ MY+KCG+I+ +R +FD DR SW++MI+GY Q + L LF
Sbjct: 134 NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNR 193
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M + +T+ ++ C + GAL GKW Y G++ + AL+D+Y+KCG
Sbjct: 194 MREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGV 253
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ DAR +F L +VSWT MI G NG EAL LF Q ++ + PN VT +V +
Sbjct: 254 VRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSS 313
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNP 494
C+ L G L K+ +P
Sbjct: 314 CSQLLNLNLGRSIHGLSIKLGSRDP 338
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 167/362 (46%), Gaps = 37/362 (10%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + I +AL LF + ++ + PN++T + +C++L + + IHG
Sbjct: 269 IVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHG 328
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+K D V ++VD YAKC A +F+ + DRDV +WN++I F+Q G +
Sbjct: 329 LSIKLGS-RDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYE 387
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 197
L LF+ MR+ + D VT++ + A L + S H++ + G + ++V V +
Sbjct: 388 ALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALL 447
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ YAKC D + A ++F G+++ ++ V+W+++I G SL+ + M+ +P+
Sbjct: 448 TFYAKCGDAESARVIFDGMDQ--KSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPN 505
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
S+LS+C H+ I G+ L + C D +
Sbjct: 506 EEIFTSILSAC-----------SHTGMIGEGWRLFTMI----------CQDYN------- 537
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ T+ +T M+ A+ G L EAL M PD+ + + GCG +L
Sbjct: 538 -LVPSTK-HYTCMVDLLARAGRLKEALDFIQKMPVQ---PDVSLFGAFLHGCGLHSRFDL 592
Query: 378 GK 379
G+
Sbjct: 593 GE 594
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 302/544 (55%), Gaps = 5/544 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK--LFDKMPDRDVASWNAMIVGFAQM 133
I H + S + D V + ++ Y+ D A+ LF ++ +V SWN M +++
Sbjct: 47 ILSHAIASGVFRDPVVSSKLL-YYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYSRS 105
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
F + + L+ M G D + + +A L + +HS + +GV DV V
Sbjct: 106 SFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQ 165
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N ISA++ C ++ A VF + +R VVSWNS+I G +++ +L + ++ DG
Sbjct: 166 NALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDG 225
Query: 254 -FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
PD T+VS LS C L G+ +H GF LDV V ++LI MYSKCG I+ A
Sbjct: 226 SLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDA 285
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R +FD + R V WT+MI+GYAQ EA+ LF M+ G D T+ ++S CG
Sbjct: 286 RKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHW 345
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GAL G+W Y ++ ++ NALI MYSKCG I A E+F+ L + + SW+ +I
Sbjct: 346 GALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVI 405
Query: 433 AGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+G A+NGE +AL LF QM M D+RPN +TFL VL AC H GF++KG YFN MT++Y
Sbjct: 406 SGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYN 465
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ P + HY CM DLLGR L EA F++++PI+ D IW +LL AC+ H NIE+ E+ A
Sbjct: 466 LTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAA 525
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
++ ELEP V ++N+YA RW V +R M ++KK PG S V I+G
Sbjct: 526 KQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHEL 585
Query: 612 TVED 615
V D
Sbjct: 586 FVAD 589
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 216/442 (48%), Gaps = 8/442 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN R + + + L+ M +N P+N +FPF+ KACA+LS + IH +
Sbjct: 95 WNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTL 154
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVASWNAMIVGFAQMGFLEKV 139
K D+FVQ ++ ++ C ++ A +FD +P RDV SWN+MI G+ Q E
Sbjct: 155 KLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELA 214
Query: 140 LCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L +F+ + G + D VT++ L L K +H G DV V ++ I
Sbjct: 215 LKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLID 274
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC ++ A VF I R V W S+I G D F +++ +R M GF D
Sbjct: 275 MYSKCGQIEDARKVFDRIPH--RNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADA 332
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ +LS+C AL QGR +H + ++D++ N LI MYSKCGDI A +F G
Sbjct: 333 ATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHG 392
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALEL 377
+ SW+A+ISG A G+ D+AL LF ME ++ P+ +T L ++ C G ++
Sbjct: 393 LTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDK 452
Query: 378 GKWFDNYACS-GGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G ++ N L + ++D+ + + +A + LP + VV W +++ C
Sbjct: 453 GLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFAC 512
Query: 436 ALNGEFVEALDLFHQMMELDLR 457
+G A Q+ EL+ R
Sbjct: 513 RNHGNIELAEFAAKQIEELEPR 534
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 319/575 (55%), Gaps = 4/575 (0%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
F M ++D+E + +TF + +L Q +H +K + V ++++MY K
Sbjct: 310 FMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 369
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
++ A +F+ M +RD+ SWN++I G AQ + +CLF + G++ D T+ +
Sbjct: 370 LRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSV 429
Query: 162 TQAAIH-AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+AA + LSL K +H I AD V I AY++ +K AE++F L
Sbjct: 430 LKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFDL 489
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
V+WN+++ G T +L + M G R D T+ ++L +C A+ QG+ V
Sbjct: 490 ---VAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQV 546
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H++ I G+DLD+ V + ++ MY KCGD+ +A+F FD + V+WT +ISG + G+
Sbjct: 547 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEE 606
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
+ AL +F M G +PD T+ ++ ALE G+ A + V +L
Sbjct: 607 ERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSL 666
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+DMY+KCGSI DA LF + + +W M+ G A +GE EAL LF QM L ++P++
Sbjct: 667 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDK 726
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VTF+ VL AC+H+G + + + Y M + Y + PE+ HYSC+AD LGR G +KEA + +
Sbjct: 727 VTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLID 786
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
SM +++ A ++ TLL AC++ + E G+ VA +L ELEP ++ YV ++N+YA +WD
Sbjct: 787 SMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDE 846
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ RTMMK ++VKK PG S + + K F V+D
Sbjct: 847 MKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDD 881
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 183/362 (50%), Gaps = 4/362 (1%)
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
++ S N ++ G+ G +L F +M ++ D VT + + A+ L+L + VH
Sbjct: 286 EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVH 345
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ +G+D ++V N+ I+ Y K + +A VF + E R ++SWNS+I G D
Sbjct: 346 CMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE--RDLISWNSVIAGIAQSDL 403
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLL-SSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+++ + ++ G +PD T+ S+L ++ PE L + +H H I D V
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVST 463
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
LI YS+ + A LF G + V+W AM+SGY Q D + L LF M GE
Sbjct: 464 ALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERS 522
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T+ +++ CG A+ GK YA G ++ V + ++DMY KCG + A+ F
Sbjct: 523 DDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 582
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
++P V+WTT+I+GC NGE AL +F QM + + P+ T + +A + LE
Sbjct: 583 DSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 642
Query: 478 KG 479
+G
Sbjct: 643 QG 644
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 234/534 (43%), Gaps = 50/534 (9%)
Query: 22 WNS------QIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
WNS Q E V +N +A LLFR ++++ + + +T + K C S+
Sbjct: 115 WNSILAAYAQSSEGVVEN-VKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASES 173
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
HG+ K D FV +V++Y K ++ LF++MP RDV WN M+ + +MGF
Sbjct: 174 FHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGF 233
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ + L G+ + +T+ L++ + G D++
Sbjct: 234 KEEAIDLSSAFHTSGLHPNEITLRLLSRIS-------------------GDDSEAG---- 270
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ ++ ND + ++S N I+ G + ++ L + M+
Sbjct: 271 QVKSFENGND-----------ASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLE 319
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D T + +L++ V ++L G+ VH + G DL ++V N+LI+MY K I AR +
Sbjct: 320 CDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTV 379
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-SGA 374
F+ M +R +SW ++I+G AQ EA+ LF + G PD T+ S++
Sbjct: 380 FNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEG 439
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L L K +A + V ALID YS+ + +A E+ + +V+W M++G
Sbjct: 440 LSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA-EVLFGRNNFDLVAWNAMMSG 498
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
+ + + L+LF M + R + T VL+ C + +G K +
Sbjct: 499 YTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKS-GYDL 557
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+L S + D+ + G + A S+P+ D W TL+ C IE GE
Sbjct: 558 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTLISGC-----IENGE 605
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 195/420 (46%), Gaps = 40/420 (9%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F F+ A + SD + + H I+ + F+ ++ MY+KC L A ++FDKMP
Sbjct: 50 FGFLRDAIST-SDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMP 108
Query: 117 DRDVASWNAMIVGFAQM--GFLEKV---LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
+RD+ SWN+++ +AQ G +E V LF +R + +T+ + + +H+ ++
Sbjct: 109 ERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 168
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+S H + IG+D D V ++ Y K +K ++F E R VV WN +
Sbjct: 169 CASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFE--EMPYRDVVLWNLM-- 224
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
L Y M GF+ EA+ H+ G+H ++
Sbjct: 225 -----------LKAYLEM---GFK---------------EEAIDLSSAFHTSGLHPN-EI 254
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+ +++ + S+ G + S D +S ++SGY G L+ F M
Sbjct: 255 TLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMV 314
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ D VT + +++ + +L LG+ A GL + V N+LI+MY K IG
Sbjct: 315 ESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIG 374
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
AR +F + E+ ++SW ++IAG A + VEA+ LF Q++ L+P+ T +VL+A +
Sbjct: 375 LARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 6/328 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + ++ HK L LF M K ++ T + K C L + +H + +
Sbjct: 492 WNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAI 551
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + D++V + ++DMY KC + A FD +P D +W +I G + G E+ L
Sbjct: 552 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALH 611
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MRL+G+ D T+ L +A+ L + +H+ + + +D V + + YA
Sbjct: 612 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYA 671
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F+ IE + + +WN+++ G + ++L ++ M G +PD T
Sbjct: 672 KCGSIDDAYCLFKRIE--MMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTF 729
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ +LS+C LV + +H YG ++ + L + G + A L D M
Sbjct: 730 IGVLSAC-SHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSM 788
Query: 320 CDRTRVS-WTAMISGYAQKGDLDEALRL 346
S + +++ +GD + R+
Sbjct: 789 SMEASASMYRTLLAACRVQGDTETGKRV 816
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV-----EALDLFHQ 450
+ N LI MYSKCGS+ AR +F +PE+ +VSW +++A A + E V EA LF
Sbjct: 83 LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRI 142
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
+ + + +R+T +L+ C H+G++ + K+ ++ + + ++ + G
Sbjct: 143 LRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKI-GLDGDDFVAGALVNIYLKFG 201
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCA 537
K+KE + MP + D +W +L A
Sbjct: 202 KVKEGRVLFEEMPYR-DVVLWNLMLKA 227
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 319/596 (53%), Gaps = 4/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + ALL + +M P+ TFP++ KAC L+ +++H I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F D+FV ++++ Y++ + A LFD+MP +D WN M+ G+ + G +
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW--ISA 199
+F MR + VT + ++ +H + G++ D V NT+ I
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDI 294
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC D++MA +F + +V ++I G +++L +R ++ + R +
Sbjct: 295 YFKCRDVEMARKIFD--QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSV 352
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ S+L +C AL G+ +H H + G V + ++ MY+KCG +D A F G+
Sbjct: 353 TLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI 412
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
D+ V W +MI+ +Q G +EA+ LF M AG D V++ + +S C AL GK
Sbjct: 413 SDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGK 472
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ G + ++ +ALIDMYSKCG++ A +F + EK VSW ++IA +G
Sbjct: 473 EIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHG 532
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
++L+LFH M+ ++P+ VTFLA++ AC HAG +++G YF MT+ + + HY
Sbjct: 533 RLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHY 592
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DL GR G+L EA + SMP DAG+WGTLL AC++H N+E+ E + LF+L+P
Sbjct: 593 ACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDP 652
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ YV ++N++A G+W+ V +R++MK V+K PG S + +N T F D
Sbjct: 653 QNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAAD 708
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 101/211 (47%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+VS+L +C P L QGR H+ + G + + L+ MY CG A+ +F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
W MI G+ G D AL +F M G +PD T +I CG ++ LG+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G + +V V ++LI YS+ G I DAR LF +P K V W M+ G NG+
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+ A +F +M + PN VTF VL C
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P LV++L C L G+ G+ N ++ L+ MY CG+ DA+ +
Sbjct: 47 PQLVSILQT---CTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNI 103
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
FY L W MI G + G+F AL + +M+ P++ TF V++AC G
Sbjct: 104 FYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC--GGLN 161
Query: 477 EKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
G + K+ + EL+ + S + G + +A MP K D +W +
Sbjct: 162 SVALGRV-VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK-DGVLWNVM 219
Query: 535 L 535
L
Sbjct: 220 L 220
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 317/597 (53%), Gaps = 8/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I V E+ A+ LF+ M ++ +P+++TF + + Y + +HG +V
Sbjct: 79 WNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVV 138
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S V T+V +Y+K +L A KLFD MP D+ WN MI G+ Q GF++
Sbjct: 139 RSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASM 198
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI+ D +T + + L +K +H + + GV DV + + I Y
Sbjct: 199 LFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYF 258
Query: 202 KCNDLKMAELVFRGIEEGLRT---VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
KC D MA +F L T +V + ++I G D+L +R ++ P+
Sbjct: 259 KCRDAVMACKMFN-----LSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNA 313
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T S+L +C A+ GR +H + I + V + +++MY+KCG +D A +F
Sbjct: 314 LTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGR 373
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + + W ++I+ ++Q G +EA+ LF M G D VTV + +S C AL G
Sbjct: 374 ISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYG 433
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K + G + ++ +ALI+MY+KCG + AR +F + EK V+W ++IA +
Sbjct: 434 KEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYH 493
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G ++L LFH M+E ++P+ +TFL +L +C HAG +E G YF MT+ Y + ++ H
Sbjct: 494 GYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEH 553
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CMADL GR G L EA + + SMP A +WGTLL AC++H N+E+ E + L +LE
Sbjct: 554 YACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLE 613
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P ++ Y+ + ++ A G+W V ++ +MK V+K PG S + +N TC F D
Sbjct: 614 PKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAAD 670
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 252/541 (46%), Gaps = 6/541 (1%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P+ TFP + K C L++ ++I I++ F D+FV ++++ +YA ++ A +
Sbjct: 8 PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
FDKM D+D WN MI G+ Q G + + LF +M + D VT + + +
Sbjct: 68 FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ +H + G+D V NT ++ Y+K L A +F + + +V WN +IG
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQ--IDLVVWNRMIG 185
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G DD+ + MI G +PD T S L S +L Q + +H + + +G L
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
DV + + LI +Y KC D A +F+ V +TAMISGY G +AL +F +
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+P+ +T S++ C A++LG+ Y L++ V +A+++MY+KCG +
Sbjct: 306 QKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLD 365
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A +F + K + W ++I + +G+ EA+ LF QM ++ + VT A L AC
Sbjct: 366 LAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACA 425
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
+ L G M K +L S + ++ + GKL A M K++ W
Sbjct: 426 NIPALHYGKEIHGFMIK-GAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVA-W 483
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFE--LEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
+++ A H + + + + E ++P +++ G DGV R M +
Sbjct: 484 NSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTE 543
Query: 590 R 590
Sbjct: 544 E 544
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 188/387 (48%), Gaps = 6/387 (1%)
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
G+ D T + + ++ L K + + +G D D+ V ++ I YA ++ A
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
F + + + V WN +I G + D ++ ++ M+ +PD T +LS
Sbjct: 65 RRFFDKMID--KDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLS-IS 121
Query: 270 CPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
C EA+V+ GR +H + G D V NTL+++YSK + AR LFD M V W
Sbjct: 122 CSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWN 181
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
MI GY Q G +D+A LF M +AG PD +T S + +S +L+ K Y
Sbjct: 182 RMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRH 241
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
G+ +V + +ALID+Y KC A ++F + +V +T MI+G LNG +AL++F
Sbjct: 242 GVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIF 301
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
+++ + PN +TF ++L AC ++ G + K ++ + S + ++ +
Sbjct: 302 RWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIK-NELEEKCPVGSAIMNMYAK 360
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLL 535
G+L A + IK DA W +++
Sbjct: 361 CGRLDLAHLIFGRISIK-DAICWNSII 386
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%)
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M G PD T +I C + LGK + G ++ V ++LI +Y+ G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
I DAR F + +K V W MI G GE A+ LF MM + +P+ VTF VL
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 470 CTHAGFLEKGWGYFNLMTK 488
+E G L+ +
Sbjct: 121 SCSEAMVEYGRQLHGLVVR 139
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 315/594 (53%), Gaps = 6/594 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V +E L LF+ M+K I + + + ++CA LS +H H +
Sbjct: 245 WSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHAL 304
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA--QMGFLEKV 139
K F SDI V T +DMYAKC L A ++F+ +P + +NA+IVG + GF +
Sbjct: 305 KCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGF--EA 362
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L F + G+ + +++ G A K + +HS + + +++ V N+ +
Sbjct: 363 LQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDM 422
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC L A +F +E R VSWN++I +++LN + M+ PD
Sbjct: 423 YGKCEALSEACCMFDEMER--RDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQF 480
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T S+L +C +AL G +H+ I G LD V LI MY KCG I+ A+ + D +
Sbjct: 481 TYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRI 540
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+T VSW A+I+G+ ++A F+ M PD T ++ C ++ LGK
Sbjct: 541 EQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGK 600
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
L +V + + L+DMYSKCG++ D+ +F P K V+W MI G A +G
Sbjct: 601 QIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHG 660
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EAL F +M ++RPN TF+++L+AC H GF++KG YFN M Y + P++ HY
Sbjct: 661 LGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHY 720
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
SCM D++GR G++ EAL +Q MP ++DA IW TLL CKIH NIEI E + +LEP
Sbjct: 721 SCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEP 780
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
++ + ++NIYA G W V+ +R MM+ N++KK PG S + + + F V
Sbjct: 781 EDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLV 834
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 269/544 (49%), Gaps = 7/544 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS + + E K++ +F M + ++ + TF + KAC+ L D +HG I
Sbjct: 143 WNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLI 202
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ F+ D+ + ++DMYAKC RLD + K+F ++P ++ W+A+I G Q L
Sbjct: 203 VRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGL 262
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M+ VGI + ++ L + +H+ + +D++V + Y
Sbjct: 263 ELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMY 322
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC L A+ +F + + ++ +N+II GC +K ++L F++ ++ G + +
Sbjct: 323 AKCGSLADAQRIFNSLPK--HSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S+C + + GR +HS + ++ V N+++ MY KC + A +FD M
Sbjct: 381 LSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME 440
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R VSW A+I+ + Q G+ +E L LF +M PD T S++ C AL G
Sbjct: 441 RRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGME 500
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
N GL + V ALIDMY KCG I +A+++ + ++T+VSW +IAG L
Sbjct: 501 IHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKH 560
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+A F++M+++ ++P+ T+ VL AC + + G + K+ +++ ++ S
Sbjct: 561 SEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKL-ELHSDVYITS 619
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE--IGEYVAYRLFELE 558
+ D+ + G ++++ + P K D W ++C H E +G + +L +
Sbjct: 620 TLVDMYSKCGNMQDSALVFEKAPNK-DFVTWNAMICGYAQHGLGEEALGYFERMQLENVR 678
Query: 559 PHSA 562
P+ A
Sbjct: 679 PNHA 682
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 210/465 (45%), Gaps = 34/465 (7%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TF I + C+ + + H ++ S F D+++ ++ MY +C L+ AYK+F+KM
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 116 -------------------------------PDRDVASWNAMIVGFAQMGFLEKVLCLFY 144
P RDV SWN+M+ GF Q G K + +F
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 145 NM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
+M R + D T + +A + L VH + +G DV + + YAKC
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
L + +F I ++ V W++II GC D+ L ++ M G + S
Sbjct: 225 KRLDDSLKIFSEIP--VKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYAS 282
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+ SC AL G +H+H + F D++V + MY+KCG + A+ +F+ + +
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHS 342
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+ A+I G + EAL+ F + +G + +++ S C G+ +
Sbjct: 343 LQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHS 402
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
+ L+ N+ V N+++DMY KC ++ +A +F + + VSW +IA NG E
Sbjct: 403 LSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEE 462
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
L+LF M+ L + P++ T+ +VL+AC+ L G N + K
Sbjct: 463 TLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIK 507
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 176/386 (45%), Gaps = 54/386 (13%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ T ++ C +L G+ H+ I GF DV + N L+ MY +C ++ A +F+
Sbjct: 43 IRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFE 102
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP--DLVTVLSMISGCGQSGA- 374
M R +S+ MISGYA G+++ A F+ + P D+V+ SM+SG Q+G
Sbjct: 103 KMSQRDVISYNTMISGYADAGEMNLANEFFY------DTPKRDVVSWNSMLSGFLQNGEC 156
Query: 375 -------LELGK----WFDNY-------ACS----GGLK-------------DNVMVCNA 399
L++G+ FD ACS GGL +V+ +A
Sbjct: 157 RKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSA 216
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+DMY+KC + D+ ++F +P K V W+ +IAGC N E + L+LF +M ++ + +
Sbjct: 217 LLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVS 276
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+ + +V ++C L+ G K ++ + D+ + G L +A
Sbjct: 277 QSIYASVFRSCAGLSALKVGTQLHAHALKC-DFGSDITVGTATLDMYAKCGSLADAQRIF 335
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
S+P K + ++ C RN E G + A + F+L S + E+ +L G +
Sbjct: 336 NSLP-KHSLQCYNAIIVGCV--RN-EKG-FEALQFFQLLLKSGLGFNEI----SLSGAFS 386
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHIN 605
A+++ + Q+ +S + N
Sbjct: 387 ACASIKGDLDGRQLHSLSVKSTLRSN 412
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
T+ WN+ I + A F M K ++P+N T+ + ACA L+ +
Sbjct: 541 EQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGK 600
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG I+K SD+++ +T+VDMY+KC + + +F+K P++D +WNAMI G+AQ G
Sbjct: 601 QIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHG 660
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
E+ L F M+L ++ + T + + +A H + K +H F
Sbjct: 661 LGEEALGYFERMQLENVRPNHATFVSILRACAHMGFID--KGLHYF 704
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 321/594 (54%), Gaps = 4/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + +AL L+ RM I P+ TFP + + C L D + +H H++
Sbjct: 163 WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI 222
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD+ V ++ MY KC + A +FD+MP RD SWNAMI G+ + + L
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ MR + D +T+ + A L + VH + I G A+VSV N+ I ++
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHS 342
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
AE+VF +E + +VSW ++I G + ++ Y M ++G PD T+
Sbjct: 343 SVGCWDEAEMVFSKME--FKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C L +G ++H G V V N+LI MYSKC ID A +F + +
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SWT++I G EAL FF P+ VT++S++S C + GAL GK
Sbjct: 461 KNVISWTSIILGLRLNYRSFEAL-FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+A GL + + NAL+DMY +CG + A F + EK V SW ++ G A G+
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKG 578
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A++LFH+M+E D+ P+ +TF ++L AC+ +G + G YF M + + P L HY+
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYAS 638
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G+L++A +F++ MPI D IWG LL AC+I++N+E+GE A +FE++ S
Sbjct: 639 VVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKS 698
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y+ + N+YA G+WD VA +R +M+ N++ PG S V + G+ F D
Sbjct: 699 VGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGD 752
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 296/616 (48%), Gaps = 38/616 (6%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S T NS I E K + KAL+ M++ + T+ + + C
Sbjct: 56 SITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSR 115
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H ++ K+ + + ++ M+ + L A+ +F KM +RD+ SWN ++ G+A+ G+
Sbjct: 116 VHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGY 175
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ L L++ M VGI+ D T + + L+ + VH I G ++DV V N
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y KC D+ A LVF + R +SWN++I G D + L + M
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPR--RDRISWNAMISGYFENDVCLEGLRLFFMMREFFVD 293
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD+ T+ S++S+C GR VH + I GF +VSV N+LI M+S G D A +
Sbjct: 294 PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMV 353
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F M + VSWTAMISGY + G ++A+ + ME G VPD +T+ S++S C G L
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ G +A GL V+V N+LIDMYSKC I A E+F+ +P K V+SWT++I G
Sbjct: 414 DKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL 473
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEKGWGY-- 482
LN EAL F QM+ L L+PN VT ++VL AC HA L G G+
Sbjct: 474 RLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDG 532
Query: 483 ------FNLMTKVYQVNPELNHY-SCMADL---------LGRKGKLKEALDFVQSM---P 523
++ + ++ P N + SC D+ ++GK A++ M
Sbjct: 533 FLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESD 592
Query: 524 IKSDAGIWGTLLCACKIHRNIEIG-EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
+ D + +LLCAC + G EY + E + H A A++ L GR +
Sbjct: 593 VNPDEITFTSLLCACSRSGMVTDGLEY--FESMEHKFHIAPNLKHYASVVDLLGRAGRLE 650
Query: 583 NLRTMMKRNQVKKFPG 598
+ +K+ + P
Sbjct: 651 DAYEFIKKMPIDPDPA 666
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 215/654 (32%), Positives = 334/654 (51%), Gaps = 62/654 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IRE + + A+ + RM + ++ T P + KAC +L + HG I
Sbjct: 85 WNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLIC 144
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVASWNAMIVGFAQMGFLEK 138
+ F S++F+ +V MY++C L+ A +FD++ R DV SWN+++ +
Sbjct: 145 CNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT 204
Query: 139 VLCLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L LF M L+ ++D ++++ + A K + K VH I G DV V
Sbjct: 205 ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFV 264
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD------------ 240
N I AYAKC ++ A VF +E + VVSWN+++ G + F
Sbjct: 265 GNALIDAYAKCGLMENAVKVFNMME--FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 322
Query: 241 -----------------------DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
++LN +R MI+ G P+ T++S+LS+C A QG
Sbjct: 323 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 382
Query: 278 RLVHSHGIHY----------GFDLDVSVINTLISMYSKCGDIDSARFLFDGMC--DRTRV 325
+H++ + G D D+ V N LI MYSKC +AR +FD + +R V
Sbjct: 383 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 442
Query: 326 SWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+WT MI G+AQ GD ++AL+LF M E G P+ T+ ++ C A+ +GK
Sbjct: 443 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 502
Query: 384 YACSGGLKDN--VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y D+ V N LI+MYSKCG + AR +F ++ +K+ +SWT+M+ G ++G
Sbjct: 503 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 562
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EALD+F +M + P+ +TFL VL AC+H G +++G YF+ M+ Y + P HY+
Sbjct: 563 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAY 622
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
DLL R G+L +A V+ MP++ A +W LL AC++H N+E+ E+ +L E+ +
Sbjct: 623 AIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 682
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y ++NIYA GRW VA +R +MK++ +KK PG S V T +F V D
Sbjct: 683 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGD 736
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 234/515 (45%), Gaps = 58/515 (11%)
Query: 84 PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF 143
PF S + T +V Y C D A + +++ WN +I + G L+ + +
Sbjct: 46 PFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 105
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
M G + D T+ + +A + H G +++V +CN ++ Y++C
Sbjct: 106 CRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 165
Query: 204 NDLKMAELVFRGI-EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY------DGFRP 256
L+ A ++F I + G+ V+SWNSI+ +L+ + M R
Sbjct: 166 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 225
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D+ ++V++L +C +A+ Q + VH + I G LDV V N LI Y+KCG +++A +F
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLD----------------------------------- 341
+ M + VSW AM++GY+Q G+
Sbjct: 286 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS----------GGLK 391
EAL +F M +G +P+ VT++S++S C GA G Y+ GG
Sbjct: 346 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 405
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALNGEFVEALDLFH 449
+++MV NALIDMYSKC S AR +F +P E+ VV+WT MI G A G+ +AL LF
Sbjct: 406 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 465
Query: 450 QMME--LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS-CMADLL 506
+M+ + PN T +L AC H + G + + +Q + + C+ ++
Sbjct: 466 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 525
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ G + A SM KS A W +++ +H
Sbjct: 526 SKCGDVDTARHVFDSMSQKS-AISWTSMMTGYGMH 559
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 316/575 (54%), Gaps = 3/575 (0%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
F M+ + I PN +TF + CA +HG +V S + ++ +++ MY+K
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C R D A KLF M D +WN MI G+ Q G +E+ L FY M G+ D +T L
Sbjct: 287 CGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+ ++L K +H + + + D+ + + I AY KC + MA+ +F
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS--V 404
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VV + ++I G + + DSL +R ++ P+ T+VS+L AL GR +H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
I GFD ++ +I MY+KCG ++ A +F+ + R VSW +MI+ AQ +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
A+ +F M +G D V++ + +S C + GK + L +V + LI
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNR 460
DMY+KCG++ A +F + EK +VSW ++IA C +G+ ++L LFH+M+E +RP++
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+TFL ++ +C H G +++G +F MT+ Y + P+ HY+C+ DL GR G+L EA + V+
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
SMP DAG+WGTLL AC++H+N+E+ E + +L +L+P ++ YV ++N +A W+
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +R++MK +V+K PG S + IN +T F D
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGD 799
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 255/531 (48%), Gaps = 4/531 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R S+I WNS I V ++AL + +M + P+ TFP + KAC L +F
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ + + FV ++++ Y + ++D KLFD++ +D WN M+ G+A+ G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
L+ V+ F MR+ I + VT + + L +H + GVD + S+ N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ +S Y+KC A +FR + V+WN +I G ++SL F+ MI G
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRA--DTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T SLL S E L + +H + + + LD+ + + LI Y KC + A+
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F V +TAMISGY G ++L +F + P+ +T++S++ G A
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LG+ + G + + A+IDMY+KCG + A E+F L ++ +VSW +MI
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
CA + A+D+F QM + + V+ A L AC + G M K + +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLAS 575
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ S + D+ + G LK A++ ++M K+ W +++ AC H ++
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLK 625
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 226/489 (46%), Gaps = 8/489 (1%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P L+ + +AC+ + + +H ++ + D + ++ MYA C K+
Sbjct: 35 PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 112 FDKMPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
F ++ R + WN++I F + G L + L ++ M G+ D T L +A + K
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK 152
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ + + +G+D + V ++ I AY + + + +F + + + V WN +
Sbjct: 153 NFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ--KDCVIWNVM 210
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
+ G D + + M D P+ T +LS C + G +H + G
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D + S+ N+L+SMYSKCG D A LF M V+W MISGY Q G ++E+L F+
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M ++G +PD +T S++ + LE K Y + ++ + +ALID Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ A+ +F VV +T MI+G NG ++++L++F ++++ + PN +T +++L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
L+ G + K + N + D+ + G++ A + + + K D
Sbjct: 451 IGILLALKLGRELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIV 508
Query: 530 IWGTLLCAC 538
W +++ C
Sbjct: 509 SWNSMITRC 517
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I + A+ +FR+M + I + ++ ACA L + + IHG
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K SD++ ++T++DMYAKC L A +F M ++++ SWN++I G L+
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 139 VLCLFYNM-RLVGIQADFVTVMGLTQAAIH 167
LCLF+ M GI+ D +T + + + H
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCH 656
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 321/594 (54%), Gaps = 4/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + +AL L+ RM I P+ TFP + + C L D + +H H++
Sbjct: 163 WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI 222
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD+ V ++ MY KC + A +FD+MP RD SWNAMI G+ + + L
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ MR + D +T+ + A L + VH + I G A+VSV N+ I ++
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHS 342
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
AE+VF +E + +VSW ++I G + ++ Y M ++G PD T+
Sbjct: 343 SVGCWDEAEMVFSKME--FKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C L +G ++H G V V N+LI MYSKC ID A +F + +
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SWT++I G EAL FF P+ VT++S++S C + GAL GK
Sbjct: 461 KNVISWTSIILGLRLNYRSFEAL-FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+A GL + + NAL+DMY +CG + A F + EK V SW ++ G A G+
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKG 578
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A++LFH+M+E D+ P+ +TF ++L AC+ +G + G YF M + + P L HY+
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYAS 638
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G+L++A +F++ MPI D IWG LL AC+I++N+E+GE A +FE++ S
Sbjct: 639 VVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKS 698
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y+ + N+YA G+WD VA +R +M+ N++ PG S V + G+ F D
Sbjct: 699 VGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGD 752
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 296/616 (48%), Gaps = 38/616 (6%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S T NS I E K + KAL+ M++ + T+ + + C
Sbjct: 56 SITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSR 115
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H ++ K+ + + ++ M+ + L A+ +F KM +RD+ SWN ++ G+A+ G+
Sbjct: 116 VHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGY 175
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ L L++ M VGI+ D T + + L+ + VH I G ++DV V N
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y KC D+ A LVF + R +SWN++I G D + L + M
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPR--RDRISWNAMISGYFENDVCLEGLRLFFMMREFFVD 293
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD+ T+ S++S+C GR VH + I GF +VSV N+LI M+S G D A +
Sbjct: 294 PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMV 353
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F M + VSWTAMISGY + G ++A+ + ME G VPD +T+ S++S C G L
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ G +A GL V+V N+LIDMYSKC I A E+F+ +P K V+SWT++I G
Sbjct: 414 DKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL 473
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEKGWGY-- 482
LN EAL F QM+ L L+PN VT ++VL AC HA L G G+
Sbjct: 474 RLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDG 532
Query: 483 ------FNLMTKVYQVNPELNHY-SCMADL---------LGRKGKLKEALDFVQSM---P 523
++ + ++ P N + SC D+ ++GK A++ M
Sbjct: 533 FLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESD 592
Query: 524 IKSDAGIWGTLLCACKIHRNIEIG-EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
+ D + +LLCAC + G EY + E + H A A++ L GR +
Sbjct: 593 VNPDEITFTSLLCACSRSGMVTDGLEY--FESMEHKFHIAPNLKHYASVVDLLGRAGRLE 650
Query: 583 NLRTMMKRNQVKKFPG 598
+ +K+ + P
Sbjct: 651 DAYEFIKKMPIDPDPA 666
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 314/594 (52%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V ++ A+ +F M+ ++I+PN++TF + CA + +HG V
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D V T++ MY+KC L A KLFD P D+ SWN +I G+ Q G + +
Sbjct: 187 SCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEH 246
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI+ D +T L K +H + I V DV + + I Y
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++MA+ + + V ++I G K ++L +R ++ + +P T
Sbjct: 307 KCRDVEMAQKIL--CQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTF 364
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+ + AL G+ +H I D V + ++ MY+KCG +D A +F+ + +
Sbjct: 365 SSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITE 424
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ + W +MI+ +Q G EA+ LF M G D V++ +S C AL GK
Sbjct: 425 KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEI 484
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G L+ ++ ++LIDMY+KCG++ +R +F + E+ VSW ++I+ +G+
Sbjct: 485 HGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDL 544
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E L LFH+M+ ++P+ VTFL ++ AC HAG +++G Y++LMT+ Y + + HY+C
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYAC 604
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+AD+ GR G+L EA + + SMP DAG+WGTLL AC IH N+E+ E + LF+L+P +
Sbjct: 605 VADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLN 664
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV +AN+ A G+W V +R++MK V+K PG S + +N T F D
Sbjct: 665 SGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAAD 718
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 238/524 (45%), Gaps = 4/524 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + + ALL + +M + P+ TFP++ KAC L +++H +
Sbjct: 26 WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVN 85
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D+FV ++++ +YA+ L A LFD +P +D WN M+ G+ + G +
Sbjct: 86 LMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR I+ + VT + L L +H + G++ D V NT ++ Y+
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYS 205
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L+ A +F + +VSWN II G ++ + +R MI G +PD T
Sbjct: 206 KCQCLQAARKLFDTSPQS--DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITF 263
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L +L + +H + I + LDV + + LI +Y KC D++ A+ +
Sbjct: 264 ASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSS 323
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V T MISGY G EAL F + P VT S+ AL LGK
Sbjct: 324 FDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKEL 383
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L + V +A++DMY+KCG + A +F + EK + W +MI C+ NG
Sbjct: 384 HGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRP 443
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA++LF QM R + V+ L AC + L G LM K + +L S
Sbjct: 444 GEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG-PLRSDLYAESS 502
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ D+ + G L + M +++ W +++ A H +++
Sbjct: 503 LIDMYAKCGNLNFSRRVFDRMQERNEVS-WNSIISAYGNHGDLK 545
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 217/456 (47%), Gaps = 5/456 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN I V +A LFR M I+P+++TF +L + + I
Sbjct: 223 SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEI 282
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG+I++ D+F+++ ++D+Y KC ++ A K+ + D MI G+ G
Sbjct: 283 HGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKN 342
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ L F + ++ VT + A L+L K +H I +D V +
Sbjct: 343 KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAI 402
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC L +A VF I E + + WNS+I C+ + +++N +R M +G R
Sbjct: 403 LDMYAKCGRLDLACRVFNRITE--KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D ++ LS+C AL G+ +H I D+ ++LI MY+KCG+++ +R +F
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +R VSW ++IS Y GDL E L LF M G PD VT L +IS CG +G ++
Sbjct: 521 DRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAG 434
G +++ G+ + + DM+ + G + +A E ++P W T++
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGA 640
Query: 435 CALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQA 469
C ++G A + +LD L LA +QA
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQA 676
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 211/453 (46%), Gaps = 6/453 (1%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY + L A LF + ++WN MI GF MG L + M G+ D T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ +A K + + K VH +G+ DV V ++ I YA+ L A+ +F I
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ + V WN ++ G +++ + M + +P+ T +LS C L G
Sbjct: 121 Q--KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H + G +LD V NTL++MYSKC + +AR LFD VSW +ISGY Q
Sbjct: 179 TQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQN 238
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G + EA LF M +AG PD +T S + + +L+ K Y + +V +
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+ALID+Y KC + A+++ V TTMI+G LNG+ EAL+ F +++ ++
Sbjct: 299 SALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
P VTF ++ A L G + K +++ + + S + D+ + G+L A
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ K DA W +++ +C +N GE +
Sbjct: 418 VFNRITEK-DAICWNSMITSCS--QNGRPGEAI 447
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 314/594 (52%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V ++ A+ +F M+ ++I+PN++TF + CA + +HG V
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D V T++ MY+KC L A KLFD +P D+ SWN +I G+ Q G + +
Sbjct: 187 GCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEH 246
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI+ D +T L K +H + I V DV + + I Y
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++MA+ + V ++I G K ++L +R ++ + +P T
Sbjct: 307 KCRDVEMAQKNL--CQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTF 364
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+ + AL G+ +H I D V + ++ MY+KCG +D A +F+ + +
Sbjct: 365 SSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITE 424
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ + W +MI+ +Q G EA+ LF M G D V++ +S C AL GK
Sbjct: 425 KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEI 484
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G L+ ++ ++LIDMY+KCG++ +R +F + EK VSW ++I+ +G+
Sbjct: 485 HGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDL 544
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E L LFH+M+ ++P+ VTFL ++ AC HAG +++G Y++LMT+ Y + + HY+C
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYAC 604
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+AD+ GR G+L EA + + SMP DAG+WGTLL AC IH N+E+ E + LF+L+P +
Sbjct: 605 VADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLN 664
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV +AN+ A G+W V +R++MK V+K PG S + +N T F D
Sbjct: 665 SGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAAD 718
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 241/527 (45%), Gaps = 10/527 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + + ALL + +M + P+ TFP++ KAC L +++H +
Sbjct: 26 WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVN 85
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D+FV ++++ +YA+ L A LFD +P +D WN M+ G+ + G +
Sbjct: 86 LMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR I+ + VT + L L +H + G++ D V NT ++ Y+
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYS 205
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L+ A +F + + +VSWN II G ++ + +R MI G +PD T
Sbjct: 206 KCQCLQAARKLFDTLPQS--DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITF 263
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L +L + +H + I + LDV + + LI +Y KC D++ A+ +C
Sbjct: 264 ASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQ---KNLCQ 320
Query: 322 RTR---VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ V T MISGY G EAL F + P VT S+ AL LG
Sbjct: 321 SSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLG 380
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K L + V +A++DMY+KCG + A +F + EK + W +MI C+ N
Sbjct: 381 KELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQN 440
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EA++LF QM R + V+ L AC + L G LM K + +L
Sbjct: 441 GRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG-PLRSDLYA 499
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
S + D+ + G L + M K++ W +++ A H +++
Sbjct: 500 ESSLIDMYAKCGNLNFSRRVFDRMQEKNEVS-WNSIISAYGNHGDLK 545
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 216/456 (47%), Gaps = 5/456 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN I V +A LFR M I+P+++TF +L + + I
Sbjct: 223 SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEI 282
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG+I++ D+F+++ ++D+Y KC ++ A K + D MI G+ G
Sbjct: 283 HGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKN 342
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ L F + ++ VT + A L+L K +H I +D V +
Sbjct: 343 KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAI 402
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC L +A VF I E + + WNS+I C+ + +++N +R M +G R
Sbjct: 403 LDMYAKCGRLDLACRVFNRITE--KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D ++ LS+C AL G+ +H I D+ ++LI MY+KCG+++ +R +F
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M ++ VSW ++IS Y GDL E L LF M G PD VT L +IS CG +G ++
Sbjct: 521 DRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAG 434
G +++ G+ + + DM+ + G + +A E ++P W T++
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGA 640
Query: 435 CALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQA 469
C ++G A + +LD L LA +QA
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQA 676
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 211/453 (46%), Gaps = 6/453 (1%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY + L A LF + ++WN MI GF MG L + M G+ D T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ +A K + + K VH +G+ DV V ++ I YA+ L A+ +F I
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ + V WN ++ G +++ + M + +P+ T +LS C L G
Sbjct: 121 Q--KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H + G +LD V NTL++MYSKC + +AR LFD + VSW +ISGY Q
Sbjct: 179 TQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQN 238
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G + EA LF M +AG PD +T S + + +L+ K Y + +V +
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+ALID+Y KC + A++ V TTMI+G LNG+ EAL+ F +++ ++
Sbjct: 299 SALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
P VTF ++ A L G + K +++ + + S + D+ + G+L A
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ K DA W +++ +C +N GE +
Sbjct: 418 VFNRITEK-DAICWNSMITSCS--QNGRPGEAI 447
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 218/629 (34%), Positives = 326/629 (51%), Gaps = 73/629 (11%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM- 115
F + C KL ++ +HG ++++PF ++F+Q ++D+Y KC LD A K+FD+M
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 116 ------------------------------PDRDVASWNAMIVGFAQMGFLEKVLCLFYN 145
P++D SWN+MI GFAQ E+ L F
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 146 M-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
M R + D+ GL+ A K L L +H DV + + I Y+KC
Sbjct: 147 MHRDDFVLNDYSFGSGLS-ACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCG 205
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSL 264
+ A VF G+EE + VVSWN +I ++L + M GF+PD T+ S+
Sbjct: 206 LVGCARRVFDGMEE--KNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263
Query: 265 LSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+S+C A +G +H+ + F D+ + N L+ MY+KCG ++ AR +FD M R
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323
Query: 324 RVS-------------------------------WTAMISGYAQKGDLDEALRLFFAMEA 352
VS W A+I+GY Q G+ +EAL LF ++
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDMYSK 406
P T ++++ LELG+ ++ G + ++ V N+LIDMY K
Sbjct: 384 ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
CGS+ + +F + EK VSW TMI G A NG +EAL+LF +M+E +P+ VT +
Sbjct: 444 CGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
L AC+HAG +E+G YF MTK + + P +HY+CM DLLGR G L+EA D ++SMP +
Sbjct: 504 LCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQP 563
Query: 527 DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRT 586
DA +W +LL ACK+HRNI +G+YVA ++FE++P S+ PYV +AN+Y+ GRW ++R
Sbjct: 564 DAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRK 623
Query: 587 MMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+M+R V K PG S + I F V+D
Sbjct: 624 LMRRRGVVKQPGCSWIDIQSNVHVFMVKD 652
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 233/477 (48%), Gaps = 48/477 (10%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + +AL F RM ++D N+ +F AC++L D IHG I
Sbjct: 124 WNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLIS 183
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + D+F+ + ++D Y+KC + CA ++FD M +++V SWN +I + Q G + L
Sbjct: 184 KSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALE 243
Query: 142 LFYNMRLVGIQADFVTVMGLTQA-----------AIHAKHLSLLKSVHSFGIHIGVDADV 190
F M +G + D VT+ + A IHA+ + K + + +
Sbjct: 244 AFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMY 303
Query: 191 SVC---------------------NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ C T +S YAK +K A +F I++ + +VSWN++
Sbjct: 304 AKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQ--KDIVSWNAL 361
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G T + +++L +R + + P T +LL++ L GR HSH + +GF
Sbjct: 362 IAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGF 421
Query: 290 ------DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ D+ V N+LI MY KCG ++ +F+ M ++ VSW MI GYAQ G EA
Sbjct: 422 RFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEA 481
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGL---KDNVMVCNA 399
L LF M +GE PD VT++ + C +G +E G ++F + GL KD+
Sbjct: 482 LELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHY---TC 538
Query: 400 LIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
++D+ + G + +A++L ++P++ V W+++++ C ++ + ++ E+D
Sbjct: 539 MVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEID 595
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 6/160 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ I WN+ I E +AL LFR +K+ + P + TF + A A L+D +
Sbjct: 351 KQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGR 410
Query: 75 MIHGHIVKSPFW------SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
H H+VK F DIFV +++DMY KC ++ ++F+ M ++D SWN MI+
Sbjct: 411 QAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMII 470
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G+AQ G+ + L LF M G + D VT++G A HA
Sbjct: 471 GYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHA 510
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 211/592 (35%), Positives = 311/592 (52%), Gaps = 68/592 (11%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
F T++ YAK +D + + FD++P RD SW MIVG+ +G K + + M
Sbjct: 81 FSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMRE 140
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
GI+ T+ + + + L K VHSF + +G+ +VSV N+ ++ YAKC D MA
Sbjct: 141 GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 210 ELVFRGI-----------------------------EEGLRTVVSWNSIIGGCTYGDKFD 240
++VF + + R +V+WNS+I G Y +
Sbjct: 201 KVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISG--YNQRGY 258
Query: 241 D--SLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
D +L+ + M+ D PD T+ S+LS+C E L G +HSH + GFD+ V+N
Sbjct: 259 DLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLN 318
Query: 298 TLISMYSKCGDIDSARFL---------------------------------FDGMCDRTR 324
LISMYS+CG +++AR L FD + DR
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDV 378
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
V+WTAMI GY Q G EA+ LF +M + P+ T+ +M+S +L GK
Sbjct: 379 VAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGS 438
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVE 443
A G +V V NALI MY+K GSI A F + E+ VSWT+MI A +G E
Sbjct: 439 AVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE 498
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
AL+LF M+ LRP+ +T++ V ACTHAG + +G YF++M V ++ P L+HY+CM
Sbjct: 499 ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMV 558
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAA 563
DL GR G L+EA +F++ MPI+ D WG+LL AC++++NI++G+ A RL LEP ++
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSG 618
Query: 564 PYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y +AN+Y+ G+W+ A +R MK +VKK G S + + K F VED
Sbjct: 619 AYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVED 670
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 217/480 (45%), Gaps = 66/480 (13%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + HKA+ + M + IEP+ T + + A + +H IV
Sbjct: 114 WTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIV 173
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++ V ++++MYAKC A +FD+M +D++SWNAMI Q+G ++ +
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMA 233
Query: 142 LF-----------------YNMRLVGIQA---------------DFVTVMGLTQAAIHAK 169
F YN R ++A D T+ + A + +
Sbjct: 234 QFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLE 293
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--RGIE----EGL--- 220
L + + +HS + G D V N IS Y++C ++ A + RG + EG
Sbjct: 294 KLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 221 ----------------------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
R VV+W ++I G + +++N +R M+ + RP+
Sbjct: 354 LDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNS 413
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ ++LS +L G+ +H + G VSV N LI+MY+K G I SA FD
Sbjct: 414 YTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDL 473
Query: 319 M-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ C+R VSWT+MI AQ G +EAL LF M G PD +T + + S C +G +
Sbjct: 474 IRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQ 533
Query: 378 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G+ +FD + + ++D++ + G + +A+E +P E VV+W ++++ C
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 66/265 (24%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
+LVH I G V ++N L+++YSK G AR LFD M RT SW ++S YA+
Sbjct: 33 AQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAK 92
Query: 337 KGDLD-------------------------------EALRLFFAMEAAGEVPDLVTVLSM 365
+GD+D +A+R+ M G P T+ ++
Sbjct: 93 RGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNV 152
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG----------------- 408
++ + LE GK ++ GL+ NV V N+L++MY+KCG
Sbjct: 153 LASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDI 212
Query: 409 -----------SIGD---ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+G A F + E+ +V+W +MI+G G + ALD+F +M+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRD 272
Query: 455 D-LRPNRVTFLAVLQACTHAGFLEK 478
L P+R T +VL AC + LEK
Sbjct: 273 SMLSPDRFTLASVLSACAN---LEK 294
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 314/570 (55%), Gaps = 14/570 (2%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
FP + + C + ++MIHGHIVK+ F D+FV T +V++Y+KC ++ A+K+FD +P
Sbjct: 68 FPLL-QECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 126
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
R+V +W ++ G+ Q L LF M G T+ + A + + K
Sbjct: 127 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 186
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH++ I +D D S+ N+ S Y+K L+ A F+ I+E + V+SW S+I C
Sbjct: 187 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE--KDVISWTSVISSCCDN 244
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ SL+F+ M+ DG +P+ T+ S+LS+C L G +HS I G+ + +
Sbjct: 245 GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIK 304
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE-----------ALR 345
N+++ +Y KCG + A+ LF+GM V+W AMI+G+A+ DL E AL
Sbjct: 305 NSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALA 364
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
+F + +G PDL T S++S C ALE G+ G+ +V+V AL+ MY+
Sbjct: 365 MFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYN 424
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCGSI A + F +P +T++SWT+MI G A +G +AL LF M + ++PN+VTF+
Sbjct: 425 KCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVG 484
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL AC+HAG ++ YF LM K Y + P ++H++C+ D+ R G+++EA D V M +
Sbjct: 485 VLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFE 544
Query: 526 SDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLR 585
+ IW L+ C+ H ++G Y A +L +L+P YV + N++ GRW V+ +R
Sbjct: 545 PNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVR 604
Query: 586 TMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+MK +V K S + I K +F D
Sbjct: 605 KLMKEEKVGKLKDWSWISIKEKVYSFKPND 634
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 244/520 (46%), Gaps = 46/520 (8%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR N +N W + + V + AL LF +M + P+N T + AC+ L
Sbjct: 126 PRRN-------VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ + +H +++K D + ++ Y+K RL+ A K F + ++DV SW ++I
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G + L F +M G++ + T+ + A L L +HS I +G
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 298
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDD----- 241
+ + + N+ + Y KC L A+ +F G+E +V+WN++I G D +D
Sbjct: 299 SSILIKNSIMYLYLKCGWLIEAQKLFEGMET--LNLVTWNAMIAGHAKMMDLAEDDVAAH 356
Query: 242 -----SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+L ++ + G +PD+ T S+LS C AL QG +H I G DV V
Sbjct: 357 KSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 416
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
L+SMY+KCG ID A F M RT +SWT+MI+G+A+ G +AL+LF M G
Sbjct: 417 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 476
Query: 357 PDLVTVLSMISGCGQSG-ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ VT + ++S C +G A E +F+ +K + LIDMY + G + +A +
Sbjct: 477 PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFD 536
Query: 416 LFYAL---PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV-TFLAVLQACT 471
+ + + P +T+ W+ +IAGC +G+ L + L L+P V T++++L
Sbjct: 537 VVHKMNFEPNETI--WSMLIAGCRSHGK--SDLGFYAAEQLLKLKPKDVETYVSLLNMHI 592
Query: 472 HAGFLE-----------------KGWGYFNLMTKVYQVNP 494
AG + K W + ++ KVY P
Sbjct: 593 SAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKP 632
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%)
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G R + + LL C+ + R++H H + GF D+ V+ L+++YSKCG ++SA
Sbjct: 59 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+FD + R +WT +++GY Q AL+LF M AG P T+ +++ C
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
++E GK Y + + + N+L YSK + A + F + EK V+SWT++I
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+ C NG+ +L F M+ ++PN T +VL AC
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSAC 276
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 305/540 (56%), Gaps = 3/540 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +V S + F+ T +V+ + ++ A KLFD+ DV WNA+I +++
Sbjct: 75 IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNM 134
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ ++ MR G+ D T + +A L +H I G +DV V N
Sbjct: 135 YRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNG 194
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAKC + +A++VF G+ RT+VSW SII G K ++L + M +G +
Sbjct: 195 LVALYAKCGHIGVAKVVFDGLYH--RTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVK 252
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD +VS+L + + L QGR +H I G + + +++ +L + Y+KCG + A+
Sbjct: 253 PDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSF 312
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M + W AMISGYA+ G +EA+ LF M + PD VTV S + Q G+L
Sbjct: 313 FDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSL 372
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
EL +W D+Y ++ V +LIDMY+KCGS+ AR +F +K VV W+ MI G
Sbjct: 373 ELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGY 432
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
L+G+ EA++L+H M + + PN VTF+ +L AC H+G +++GW F+ M K +++ P
Sbjct: 433 GLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPR 491
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
HYSC+ DLLGR G L EA F+ +PI+ +WG LL ACKI+R + +GEY A +LF
Sbjct: 492 NEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLF 551
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P++ YV+++N+YA WD VA++R +M+ + K G S++ INGK F V D
Sbjct: 552 SLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGD 611
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 228/424 (53%), Gaps = 17/424 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR N + ++R M+ + P+ TFP++ KAC +L DF S +IHG I+
Sbjct: 122 WNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQII 181
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F SD+FVQ +V +YAKC + A +FD + R + SW ++I G+AQ G + L
Sbjct: 182 KYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALR 241
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR G++ D++ ++ + +A L +S+H F I +G++ + ++ + + YA
Sbjct: 242 MFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYA 301
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A+ F ++ V+ WN++I G ++++N + +MI +PD TV
Sbjct: 302 KCGLVTVAKSFFDQMKT--TNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTV 359
Query: 262 VS--LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
S L S+ V L Q + +YG D+ V+ +LI MY+KCG ++ AR +FD
Sbjct: 360 RSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNT--SLIDMYAKCGSVEFARRVFDRN 417
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
D+ V W+AMI GY G EA+ L+ M+ AG P+ VT + +++ C SG ++ G
Sbjct: 418 SDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEG- 476
Query: 380 WFDNYACSGGLKDNVMV-----CNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
++ + C +KD +V + ++D+ + G +G+A +P E V W +++
Sbjct: 477 -WELFHC---MKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLS 532
Query: 434 GCAL 437
C +
Sbjct: 533 ACKI 536
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI W S I +A +AL +F +M+ N ++P+ + I +A + D + IH
Sbjct: 219 TIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIH 278
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G ++K + + ++ YAKC + A FD+M +V WNAMI G+A+ G E
Sbjct: 279 GFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAE 338
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF+ M I+ D VTV A+ L L + + + +D+ V + I
Sbjct: 339 EAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLI 398
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC ++ A VF + + VV W+++I G + +++N Y M G P+
Sbjct: 399 DMYAKCGSVEFARRVFDRNSD--KDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPN 456
Query: 258 VTTVVSLLSSC 268
T + LL++C
Sbjct: 457 DVTFIGLLTAC 467
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 89/154 (57%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+++ + WN+ I A +A+ LF M +I+P+++T A A++ +Q
Sbjct: 317 KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQ 376
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ ++ KS + SDIFV T+++DMYAKC ++ A ++FD+ D+DV W+AMI+G+ G
Sbjct: 377 WMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHG 436
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + L++ M+ G+ + VT +GL A H+
Sbjct: 437 QGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHS 470
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 309/581 (53%), Gaps = 5/581 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+ L LF +MK ++ N ++ A A+ D + IHG ++ SDI V T ++
Sbjct: 312 EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLM 371
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MYAKC + A +LF + RD+ +W+A+I Q G+ E+ L LF M+ ++ + V
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+M + A L L KS+H F + +D+D+S +S YAKC A F +
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 217 EEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
R +V+WNS+I G GD ++ FY+ + PD T+V ++ +C L
Sbjct: 492 SS--RDIVTWNSLINGYAQIGDPYNAIDMFYK-LRLSAINPDAGTMVGVVPACALLNDLD 548
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGY 334
QG +H + GF+ D V N LI MY+KCG + SA FLF+ + V+W +I+ Y
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G EA+ F M P+ VT +S++ A G F G N
Sbjct: 609 MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT 668
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+V N+LIDMY+KCG + + +LF + K VSW M++G A++G A+ LF M E
Sbjct: 669 LVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQES 728
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++ + V+F++VL AC H G +E+G F+ M+ Y + P+L HY+CM DLLGR G E
Sbjct: 729 QVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDE 788
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
L F++ MP++ DAG+WG LL +C++H N+++GE L +LEP + A +V +++IYA
Sbjct: 789 TLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQ 848
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
GRW R+ M +KK PG S V + K F V D
Sbjct: 849 SGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD 889
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 260/542 (47%), Gaps = 7/542 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS IR + ++AL ++ M + +EP+ TF F+ KAC + HG I
Sbjct: 97 WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D+F+ +VDMY+K L A ++FDKMP RDV +WNAMI G +Q + +
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F +M+LVG++ V+++ L ++ L +S+H G D +V N I Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIH--GYVFRRDFSSAVSNGLIDLYS 274
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+ +A VF + + + VSW +++ G + F + L + M R + +
Sbjct: 275 KCGDVDVARRVFDQMVD--QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS + L +G+ +H + D D+ V L+ MY+KCG+ + A+ LF G+
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG 392
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V+W+A+I+ Q G +EAL LF M+ P+ VT++S++ C L+LGK
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ + ++ AL+ MY+KCG A F + + +V+W ++I G A G+
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A+D+F+++ + P+ T + V+ AC L++G L+ K+ + + +
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNA 571
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC--KIHRNIEIGEYVAYRLFELEP 559
+ D+ + G L A D W ++ A H I + RL P
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 631
Query: 560 HS 561
+S
Sbjct: 632 NS 633
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 236/484 (48%), Gaps = 12/484 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
N L +P + +C L+ L IH I+ S F + T ++++Y+ + D A +F
Sbjct: 31 NYLHYPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVF 86
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D P+ WN+MI + + + L ++Y M G++ D T + +A A +L
Sbjct: 87 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
H G++ DV + + Y+K DLK A VF + + R VV+WN++I G
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK--RDVVAWNAMIAG 204
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS-HGIHYGFDL 291
+ + ++++F+R M G P ++++L +C + ++ L S HG + D
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG-ICKLSNIE--LCRSIHGYVFRRDF 261
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V N LI +YSKCGD+D AR +FD M D+ VSW M++GYA G E L LF M+
Sbjct: 262 SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 321
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ V+ +S ++ LE GK A + +++V L+ MY+KCG
Sbjct: 322 LGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETE 381
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A++LF+ L + +V+W+ +IA G EAL LF +M ++PNRVT +++L AC
Sbjct: 382 KAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACA 441
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
L+ G K ++ +L+ + + + + G AL M + D W
Sbjct: 442 DLSLLKLGKSIHCFTVKA-DMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTW 499
Query: 532 GTLL 535
+L+
Sbjct: 500 NSLI 503
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 4/297 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S I WNS I + + A+ +F +++ + I P+ T + ACA L+D
Sbjct: 493 SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTC 552
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFAQMG 134
IHG IVK F SD V+ ++DMYAKC L A LF+K +D +WN +I + Q G
Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ + F+ MRL + VT + + AA + + H+ I +G ++ V N
Sbjct: 613 HAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGN 672
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I YAKC L +E +F ++ + VSWN+++ G D ++ + M
Sbjct: 673 SLIDMYAKCGQLXYSEKLFNEMDH--KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQV 730
Query: 255 RPDVTTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ D + VS+LS+C + +GR + HS Y D+ ++ + + G D
Sbjct: 731 QIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + A +A+ F +M+ + PN++TF + A A L+ F H I+
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F S+ V +++DMYAKC +L + KLF++M +D SWNAM+ G+A G ++ +
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV-HSFG--IHIGVDADVSVCNTWIS 198
LF M+ +Q D V+ + + A H + + + HS HI D + C +
Sbjct: 721 LFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLL 780
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
A D + + +E W +++G C
Sbjct: 781 GRAGLFDETLGFIKVMPVEPDAGV---WGALLGSC 812
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 317/563 (56%), Gaps = 6/563 (1%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
P+ TFP + +A S+ +Q+ + +F ++V Y + R+ AYK
Sbjct: 67 RPDGFTFPSLIRAAP--SNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYK 124
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD+M +RDV +WNAM+ G + + + LF M G+ D VTV + +
Sbjct: 125 VFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGD 184
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L +H + + G+D ++ VCN I Y K L+ A+ VF G+E R +V+WNSII
Sbjct: 185 QVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGME--CRDLVTWNSII 242
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
GC + +L ++ M G PDV T+VSL S+ + +H + + G+D
Sbjct: 243 SGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD 302
Query: 291 LD-VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+D + N ++ MY+K +I++A+ +FD M + VSW +I+GY Q G +EA+ +
Sbjct: 303 VDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGH 362
Query: 350 MEAAGEVPDLV-TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M+ + + T +S++ GAL+ G + GL +V V LID+Y+KCG
Sbjct: 363 MQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCG 422
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ +A LF +P ++ W +I+G ++G EAL LF +M + ++P+ VTF+++L
Sbjct: 423 KLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLA 482
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC+HAG +++G +F++M Y + P HY+CMAD+LGR G+L EA +F+Q+MPIK D+
Sbjct: 483 ACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDS 542
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM 588
+WG LL AC+IH N+E+G+ + LFEL+P + YV M+N+YA G+WDGV +R+++
Sbjct: 543 AVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLV 602
Query: 589 KRNQVKKFPGQSLVHINGKTCTF 611
+R ++K PG S + + F
Sbjct: 603 RRQNLQKTPGWSSIEVKRSVNVF 625
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 215/453 (47%), Gaps = 8/453 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ + A +A+ LF RM + + +T + C L D + + ++H
Sbjct: 134 VPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHV 193
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ VK ++FV ++D+Y K L+ A +F M RD+ +WN++I G Q G
Sbjct: 194 YAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAA 253
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA-DVSVCNTWI 197
L +F MR G+ D +T++ L A KS+H + + G D D+ N +
Sbjct: 254 ALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIV 313
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYDGFRP 256
YAK ++++ A+ +F + ++ VSWN++I G ++++ Y HM ++G +
Sbjct: 314 DMYAKLSNIEAAQRMFDSMP--VQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKA 371
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T VS+L + AL QG +H+ I G ++DV V LI +Y+KCG + A LF
Sbjct: 372 IQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLF 431
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ M R+ W A+ISG G EAL LF M+ G PD VT +S+++ C +G ++
Sbjct: 432 EKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVD 491
Query: 377 LGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAG 434
G+ +FD + + + DM + G + +A +P K W ++
Sbjct: 492 QGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGA 551
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
C ++G + ELD P V + ++
Sbjct: 552 CRIHGNVEMGKVASQNLFELD--PENVGYYVLM 582
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/595 (34%), Positives = 327/595 (54%), Gaps = 6/595 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+S I VD E+ + L +FR + D+E +++T IA AC +L ++ +HG I+
Sbjct: 168 WSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCII 227
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + + +V MY++CD A ++F M +R +ASW AMI + + + ++ L
Sbjct: 228 RQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQ 287
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISAY 200
+F M + + VT+M + + L KSVH + + HI +D D S+ I Y
Sbjct: 288 VFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDD-SLGPALIEYY 346
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A+ L E V I G R ++SWN +I F ++L + M G PD +
Sbjct: 347 AQFGKLSYCEKVLHTI--GKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFS 404
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S +S+C L G +H + I LD V N+LI MYSKCG +D A +FD +
Sbjct: 405 LSSSISACANVGLLWLGHQIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQ 463
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ V+W +MI G++Q G+ EA+RLF M + VT L+ I C G LE GKW
Sbjct: 464 SKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKW 523
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + G+K ++ + ALIDMY+KCG + A +F ++ E++VVSW+ MI GC ++G+
Sbjct: 524 LHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGD 583
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
A+ LF +M++ +++PN +TF+ +L AC+H+G++E+G YFN M K ++V P L H++
Sbjct: 584 IDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSM-KNFEVEPNLEHFA 642
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLL R G L EA + SMP ++A IWG LL C+IH+ +++ + L ++
Sbjct: 643 CMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTD 702
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y ++NIYA G WD +R+ MK +KK PG S + ++ K F D
Sbjct: 703 DTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGD 757
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/526 (30%), Positives = 261/526 (49%), Gaps = 9/526 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I+ V N +A+ L+ +M I ++ F + +ACA + + +HG I+
Sbjct: 67 WAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRII 126
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D V+T+++ MY L A K+FD M RD+ SW+++I + G + L
Sbjct: 127 KYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLE 186
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F + ++ D VT++ + A L L KSVH I ++ + + + Y+
Sbjct: 187 MFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYS 246
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C+D AE +F + R++ SW ++I F +L + M+ P+ T+
Sbjct: 247 RCDDFSSAERIFSNMFN--RSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTI 304
Query: 262 VSLLSSCVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++LSSC L +G+ VH + + H D D S+ LI Y++ G + + +
Sbjct: 305 MAVLSSCAGFNLLREGKSVHCYAVKHIDLD-DDSLGPALIEYYAQFGKLSYCEKVLHTIG 363
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R +SW +IS YA +G EAL +F M+ G++PD ++ S IS C G L LG
Sbjct: 364 KRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQ 423
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
YA + D V N+LIDMYSKCG + A +F + K+VV+W +MI G + G
Sbjct: 424 IHGYAIKRHILDE-FVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGN 482
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHY 499
+EA+ LF QM L N VTFL +QAC+H G LEKG W + L+ Y V +L
Sbjct: 483 SLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIA--YGVKKDLFID 540
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ + D+ + G L+ A SM +S W ++ C +H +I+
Sbjct: 541 TALIDMYAKCGDLRIAHRVFDSMSERSVVS-WSAMIGGCGMHGDID 585
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 164/317 (51%), Gaps = 4/317 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN I + +AL +F +M++ P++ + ACA + IH
Sbjct: 366 NIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIH 425
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ +K D FVQ +++DMY+KC +D AY +FD++ + V +WN+MI GF+Q+G
Sbjct: 426 GYAIKRHIL-DEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSL 484
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF M L + + VT + QA H HL K +H I GV D+ + I
Sbjct: 485 EAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALI 544
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC DL++A VF + E R+VVSW+++IGGC D +++ + MI +P+
Sbjct: 545 DMYAKCGDLRIAHRVFDSMSE--RSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPN 602
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T +++LS+C + +G+ + ++ + ++ ++ + S+ GD+D A + +
Sbjct: 603 DITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIIN 662
Query: 318 GMCDRTRVS-WTAMISG 333
M S W A+++G
Sbjct: 663 SMPFPAEASIWGALLNG 679
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 220/499 (44%), Gaps = 20/499 (4%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
++C L ++H H++ + D T +++ Y++ L + +F+ + D
Sbjct: 9 RSCTSLRPL---TLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSF 65
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
W +I F + + L+ M I + +A +L + + VH
Sbjct: 66 MWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRI 125
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
I G+D D V + + Y L A+ VF + R +VSW+SII + +
Sbjct: 126 IKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTT--RDLVSWSSIISCYVDNGESSE 183
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
L +R ++ D T++S+ +C L + VH I + + + L+
Sbjct: 184 GLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVL 243
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYS+C D SA +F M +R+ SWTAMIS Y + +AL++F M P+ VT
Sbjct: 244 MYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVT 303
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++++S C L GK YA D+ + ALI+ Y++ G + ++ + +
Sbjct: 304 IMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIG 363
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ ++SW +I+ A G F EAL +F QM P+ + + + AC + G L G
Sbjct: 364 KRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQ 423
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA---LDFVQSMPIKSDAGIWGTLLCA- 537
K + ++ + + + D+ + G + A D +QS + + W +++C
Sbjct: 424 IHGYAIKRHILDEFVQ--NSLIDMYSKCGHVDLAYLIFDRIQSKSVVA----WNSMICGF 477
Query: 538 CKIHRNIEIGEYVAYRLFE 556
+I ++E A RLF+
Sbjct: 478 SQIGNSLE-----AIRLFD 491
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 5/321 (1%)
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
M L ++ + L+LL HS + G+ D I +Y++ L+ ++LVF +
Sbjct: 5 MPLFRSCTSLRPLTLL---HSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQN 61
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
W +I + + ++++ Y MIY S+L +C L G
Sbjct: 62 P--DSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGE 119
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH I YG D+D V +L+ MY G + +A+ +FD M R VSW+++IS Y G
Sbjct: 120 EVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNG 179
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ E L +F + + D VT+LS+ CG+ G L L K ++ + +
Sbjct: 180 ESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLND 239
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+ MYS+C A +F + +++ SWT MI+ + F +AL +F +M+E + P
Sbjct: 240 ALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAP 299
Query: 459 NRVTFLAVLQACTHAGFLEKG 479
N VT +AVL +C L +G
Sbjct: 300 NAVTIMAVLSSCAGFNLLREG 320
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 3/259 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S ++ WNS I + +A+ LF +M N ++ N +TF +AC+ + +
Sbjct: 463 QSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGK 522
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H ++ D+F+ T ++DMYAKC L A+++FD M +R V SW+AMI G G
Sbjct: 523 WLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHG 582
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ + LF M ++ + +T M + A H+ ++ K + + V+ ++
Sbjct: 583 DIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFA 642
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ ++ DL A + + + W +++ GC + D N R ++
Sbjct: 643 CMVDLLSRAGDLDEAYRIINSMPFPAEASI-WGALLNGCRIHQRMDMIRNIERDLL--DM 699
Query: 255 RPDVTTVVSLLSSCVCPEA 273
R D T +LLS+ E
Sbjct: 700 RTDDTGYYTLLSNIYAEEG 718
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+T + L SC L L+HSH + G D LI YS+ G + S++ +F+
Sbjct: 1 MTLYMPLFRSCTSLRPLT---LLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFE 57
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP--DLVTVLSMISGCGQSGAL 375
+ W +I + EA+ L+ M ++P D + S++ C G L
Sbjct: 58 TFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKM-IYKQIPISDFI-FSSVLRACAGFGNL 115
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
++G+ GL + +V +L+ MY G + +A+++F + + +VSW+++I+
Sbjct: 116 DVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCY 175
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
NGE E L++F ++ D+ + VT L++ AC GFL
Sbjct: 176 VDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLR 217
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 314/570 (55%), Gaps = 14/570 (2%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
FP + + C + ++MIHGHIVK+ F D+FV T +V++Y+KC ++ A+K+FD +P
Sbjct: 62 FPLL-QECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 120
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
R+V +W ++ G+ Q L LF M G T+ + A + + K
Sbjct: 121 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 180
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH++ I +D D S+ N+ S Y+K L+ A F+ I+E + V+SW S+I C
Sbjct: 181 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE--KDVISWTSVISSCCDN 238
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ SL+F+ M+ DG +P+ T+ S+LS+C L G +HS I G+ + +
Sbjct: 239 GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIK 298
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE-----------ALR 345
N+++ +Y KCG + A+ LF+GM V+W AMI+G+A+ DL E AL
Sbjct: 299 NSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALA 358
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
+F + +G PDL T S++S C ALE G+ G+ +V+V AL+ MY+
Sbjct: 359 MFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYN 418
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCGSI A + F +P +T++SWT+MI G A +G +AL LF M + ++PN+VTF+
Sbjct: 419 KCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVG 478
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL AC+HAG ++ YF LM K Y + P ++H++C+ D+ R G+++EA D V M +
Sbjct: 479 VLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFE 538
Query: 526 SDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLR 585
+ IW L+ C+ H ++G Y A +L +L+P YV + N++ GRW V+ +R
Sbjct: 539 PNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVR 598
Query: 586 TMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+MK +V K S + I K +F D
Sbjct: 599 KLMKEEKVGKLKDWSWISIKEKVYSFKPND 628
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 244/520 (46%), Gaps = 46/520 (8%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR N +N W + + V + AL LF +M + P+N T + AC+ L
Sbjct: 120 PRRN-------VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ + +H +++K D + ++ Y+K RL+ A K F + ++DV SW ++I
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G + L F +M G++ + T+ + A L L +HS I +G
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 292
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDD----- 241
+ + + N+ + Y KC L A+ +F G+E +V+WN++I G D +D
Sbjct: 293 SSILIKNSIMYLYLKCGWLIEAQKLFEGMET--LNLVTWNAMIAGHAKMMDLAEDDVAAH 350
Query: 242 -----SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+L ++ + G +PD+ T S+LS C AL QG +H I G DV V
Sbjct: 351 KSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 410
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
L+SMY+KCG ID A F M RT +SWT+MI+G+A+ G +AL+LF M G
Sbjct: 411 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 470
Query: 357 PDLVTVLSMISGCGQSG-ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ VT + ++S C +G A E +F+ +K + LIDMY + G + +A +
Sbjct: 471 PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFD 530
Query: 416 LFYAL---PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV-TFLAVLQACT 471
+ + + P +T+ W+ +IAGC +G+ L + L L+P V T++++L
Sbjct: 531 VVHKMNFEPNETI--WSMLIAGCRSHGK--SDLGFYAAEQLLKLKPKDVETYVSLLNMHI 586
Query: 472 HAGFLE-----------------KGWGYFNLMTKVYQVNP 494
AG + K W + ++ KVY P
Sbjct: 587 SAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKP 626
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%)
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G R + + LL C+ + R++H H + GF D+ V+ L+++YSKCG ++SA
Sbjct: 53 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+FD + R +WT +++GY Q AL+LF M AG P T+ +++ C
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
++E GK Y + + + N+L YSK + A + F + EK V+SWT++I
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+ C NG+ +L F M+ ++PN T +VL AC
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSAC 270
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/594 (33%), Positives = 315/594 (53%), Gaps = 17/594 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + +A+ + RM+ I +N TFPF+ KAC +L + Q +HG ++
Sbjct: 92 WNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLI 151
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F D++V ++DMY K ++ A K+FD+MP RD+ SWN+M+ G+ G L
Sbjct: 152 KIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLM 211
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M +G +AD ++ A L +H I ++ D+ V + I Y
Sbjct: 212 CFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYG 271
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + AE VF I + +V+WN++IGG DK PDV T+
Sbjct: 272 KCGKVDYAERVFNRIYS--KNIVAWNAMIGGMQEDDKV---------------IPDVITM 314
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL SC AL++G+ +H I F + + L+ MY KCG++ A +F+ M +
Sbjct: 315 INLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNE 374
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW M++ Y Q EAL++F + PD +T+ S++ + + GK
Sbjct: 375 KNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQI 434
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+Y GL N + NA++ MY+KCG + ARE F + K VVSW TMI A++G
Sbjct: 435 HSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFG 494
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
++ F +M +PN TF+++L AC+ +G +++GWG+FN M Y ++P + HY C
Sbjct: 495 RTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGC 554
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G L EA F++ MP+ A IWG+LL A + H ++ + E A + L+ +
Sbjct: 555 MLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDN 614
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N+YA GRW+ V ++ +MK + K G S+V ING++ +F +D
Sbjct: 615 TGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQD 668
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 210/434 (48%), Gaps = 19/434 (4%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A +F+KM D WN +I G+ G ++ + +Y M GI++D T + +A
Sbjct: 77 ALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGE 136
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
L + + VH I IG D DV VCN I Y K +++AE VF E +R +VSWN
Sbjct: 137 LLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFD--EMPVRDLVSWN 194
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
S++ G SL ++ M+ G + D ++S L +C L G +H I
Sbjct: 195 SMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRS 254
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
+LD+ V +LI MY KCG +D A +F+ + + V+W AMI G + +
Sbjct: 255 ELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKV------- 307
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
+PD++T+++++ C QSGAL GK +A +++ AL+DMY KC
Sbjct: 308 --------IPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKC 359
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + A +F + EK +VSW TM+A N ++ EAL +F ++ L+P+ +T +VL
Sbjct: 360 GELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVL 419
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
A +G + + K+ + + + + + G L+ A +F M K D
Sbjct: 420 PAVAELASRSEGKQIHSYIMKL-GLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCK-D 477
Query: 528 AGIWGTLLCACKIH 541
W T++ A IH
Sbjct: 478 VVSWNTMIMAYAIH 491
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
+ + G + +A +F+ M W +I GY G EA+ ++ ME G D T
Sbjct: 68 FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+I CG+ AL +G+ G +V VCN LIDMY K G I A ++F +P
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+ +VSW +M++G ++G+ + +L F +M+ L + +R ++ L AC+ L G
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSG--- 244
Query: 483 FNLMTKVYQVNPELN--HYSCMADLLGRKGKLKEA 515
+ +V + EL+ + + D+ G+ GK+ A
Sbjct: 245 MEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYA 279
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/601 (34%), Positives = 327/601 (54%), Gaps = 14/601 (2%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR+N I W+ IR + A KAL L+ +M + + P T+PF+ KACA L
Sbjct: 64 PRINPI-------AWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGL 116
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
++IH H+ S F +D++V T +VD YAKC L+ A K+FD+MP RD+ +WNAMI
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 128 VGFAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
GF+ L V+ LF +MR + G+ + T++G+ A A L K+VH + +G
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D+ V + YAK + A VF + + V+W+++IGG + ++ +
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVFD--LDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 247 RHMIYDGFRPDVTTVVS--LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
M+ + VT V +L C L GR VH + + GF LD++V NT+IS Y+
Sbjct: 295 FQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYA 354
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
K G + A F + + +S+ ++I+G +E+ RLF M +G PD+ T+L
Sbjct: 355 KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+++ C AL G Y G N +CNAL+DMY+KCG + A+ +F + ++
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRD 474
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+VSW TM+ G ++G EAL LF+ M E + P+ VT LA+L AC+H+G +++G FN
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFN 534
Query: 485 LMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
M++ + V P ++HY+CM DLL R G L EA DFV MP + D + GTLL AC ++N
Sbjct: 535 SMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKN 594
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
E+G V+ ++ L + V ++N Y+ RW+ A +R + K+ + K PG S V
Sbjct: 595 AELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Query: 604 I 604
+
Sbjct: 654 V 654
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 239/494 (48%), Gaps = 16/494 (3%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
F + + C + + + Q+IH H++K S V + +YA C+ ++ A +FD++
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 116 PDRDV--ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
P + +W+ MI +A F EK L L+Y M G++ T + +A + +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
K +HS D+ VC + YAKC +L+MA VF + + R +V+WN++I G
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPK--RDMVAWNAMISGF 179
Query: 234 TYGDKFDDSLNFYRHM-IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
+ D + + M DG P+++T+V + + AL +G+ VH + GF D
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ V ++ +Y+K I AR +FD + V+W+AMI GY + + EA +FF M
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 353 AGEVPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
V + V + ++ GC + G L G+ YA G ++ V N +I Y+K GS+
Sbjct: 300 NDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
DA F + K V+S+ ++I GC +N E+ LFH+M +RP+ T L VL AC
Sbjct: 360 CDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 471 THAGFLEKG---WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
+H L G GY + Y VN + + + D+ + GKL A +M K D
Sbjct: 420 SHLAALGHGSSCHGY--CVVHGYAVNTSI--CNALMDMYTKCGKLDVAKRVFDTMH-KRD 474
Query: 528 AGIWGTLLCACKIH 541
W T+L IH
Sbjct: 475 IVSWNTMLFGFGIH 488
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/590 (35%), Positives = 318/590 (53%), Gaps = 64/590 (10%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
F T++ YAK +L+ A+++FD +P RD SW +IVG+ QMG E + +F +M
Sbjct: 42 FSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD 101
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
+ T+ + + + K VHSF + +G+ A V V N+ ++ YAK DLKMA
Sbjct: 102 KVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMA 161
Query: 210 ELVFRGIE---------------------------EGL--RTVVSWNSIIGGCTYGDKFD 240
++VF ++ E L R +VSWNS+I GC +
Sbjct: 162 KVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDN 221
Query: 241 DSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
++L F+ ++ D +PD ++ S LS+C E L G+ +H + + FD +V N L
Sbjct: 222 EALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNAL 281
Query: 300 ISMYSKCG---------------------------------DIDSARFLFDGMCDRTRVS 326
ISMY+K G DI AR +F+ + D V+
Sbjct: 282 ISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVA 341
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
WTAMI GY Q G ++A+ +F M + G P+ T+ +M+S +L GK A
Sbjct: 342 WTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAI 401
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEAL 445
G + V NAL MY+K GSI AR++F L + + VSWT+MI A +G EA+
Sbjct: 402 RSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAI 461
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
+LF QM+ L ++P+ +T++ VL ACTH G +E+G YF+LM V++++P L+HY+CM DL
Sbjct: 462 ELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDL 521
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPY 565
GR G L+EA FV++MP++ D WG+LL +CK+++N+++ + A RL +EP+++ Y
Sbjct: 522 FGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAY 581
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+AN+Y+ G+WD A +R +MK VKK G S V I KT F VED
Sbjct: 582 SALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVED 631
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 210/466 (45%), Gaps = 66/466 (14%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
A+ +F M K+ + P T + +CA + +H +VK + + V ++++
Sbjct: 91 AIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLN 150
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNA-------------------------------M 126
MYAK L A +FD+M R+ +SWNA M
Sbjct: 151 MYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSM 210
Query: 127 IVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
I G Q GF + L F + ++ ++ D ++ A + + LS K +H + +
Sbjct: 211 IAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTM 270
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVF-----------------------------RGI 216
DA +V N IS YAK +++A + R I
Sbjct: 271 FDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQI 330
Query: 217 EEGLR--TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
L+ VV+W ++I G +D++ ++ M+ +G RP+ T+ ++LS+ +L
Sbjct: 331 FNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSL 390
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISG 333
G+ +H+ I G L SV N L +MY+K G I+ AR +F+ + +R VSWT+MI
Sbjct: 391 NHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMA 450
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKD 392
AQ G +EA+ LF M G PD +T + ++S C G +E G+ +FD +
Sbjct: 451 LAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDP 510
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
+ ++D++ + G + +A + +P E V++W ++++ C +
Sbjct: 511 TLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKV 556
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 181/460 (39%), Gaps = 90/460 (19%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRR-MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS I ++AL F +K ++P+ + ACA L + + IH
Sbjct: 204 IVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIH 263
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL-------------------------- 111
G+IV++ F + V ++ MYAK ++ A ++
Sbjct: 264 GYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGD 323
Query: 112 -------FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
F+ + D DV +W AMIVG+ Q G + +F M G + + T+ + A
Sbjct: 324 ITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSA 383
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ L+ K +H+ I G SV N + YAK + A VF + + R V
Sbjct: 384 SSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQN-RDTV 442
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SW S+I ++++ + M+ G +PD T V +LS+C +HG
Sbjct: 443 SWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC-------------THG 489
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-----CDRTRVSWTAMISGYAQKGD 339
G ++ R FD M D T + M+ + + G
Sbjct: 490 ----------------------GLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGL 527
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL---KDNVMV 396
L EA + M PD++ S++S C ++L K A L +N
Sbjct: 528 LQEAYKFVENMPME---PDVIAWGSLLSSCKVYKNVDLAK----VAAERLLLIEPNNSGA 580
Query: 397 CNALIDMYSKCGSIGDA---RELFYA--LPEKTVVSWTTM 431
+AL ++YS CG DA R+L A + ++ +SW +
Sbjct: 581 YSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQI 620
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 66/257 (25%)
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL---- 340
+ G V ++N L+++Y+K G A LF+ M +T SW ++SGYA++G L
Sbjct: 2 VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61
Query: 341 ---------------------------DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
++A+++F M +P T+ ++++ C +G
Sbjct: 62 QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSK--------------------------- 406
+ +GK ++ GL V V N+L++MY+K
Sbjct: 122 SRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMIS 181
Query: 407 ----CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRV 461
CG + A F L E+ +VSW +MIAGC +G EAL F ++ + L+P+R
Sbjct: 182 LHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRF 241
Query: 462 TFLAVLQACTHAGFLEK 478
+ + L AC + LEK
Sbjct: 242 SLASALSACAN---LEK 255
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL +V + N L+++Y+K G DA +LF +P KT SW T+++G A G+ +A
Sbjct: 5 GLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA---- 60
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD--LL 506
HQ+ +L + V++ ++ G E F M K + + + +A
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
G +G K+ FV + + + + +LL
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLL 149
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 307/575 (53%), Gaps = 2/575 (0%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
LF+RM+ + PN TF + A + L D ++ H +K D+FV +++++MY
Sbjct: 95 LFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYC 154
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
K A K+FD MP+R+ SW MI G+A + L LF MR +
Sbjct: 155 KAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTS 214
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ A + ++ K +H + G+ + VSV N ++ YAKC L A F +
Sbjct: 215 VLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSD-- 272
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ ++W+++I G D +L + M G RP T V ++++C A +G+ V
Sbjct: 273 KNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQV 332
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + + GF+ + V+ L+ MY+KC I AR FD + + V WT+MI GY Q G+
Sbjct: 333 HDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGEN 392
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
++AL L+ ME G +P+ +T+ S++ C ALE GK G V + +AL
Sbjct: 393 EDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSAL 452
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
MY+KCG + D +F +P + V+SW MI+G + NG EAL+LF +M +P+
Sbjct: 453 STMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDY 512
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VTF+ +L AC+H G +E+GWGYF +M + ++P + HY+CM D+L R GKLKEA++F +
Sbjct: 513 VTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTE 572
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
S I +W +L AC+ +RN E+G Y +L EL ++ YV +++IY+ GRW+
Sbjct: 573 SATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWED 632
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +R MMK V K PG S + + F V+D
Sbjct: 633 VERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKD 667
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 240/464 (51%), Gaps = 7/464 (1%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H I+KS S +++ ++V++YAKC RL A +F+++ ++DV SWN +I G++Q
Sbjct: 26 KALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQH 84
Query: 134 G--FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G V+ LF MR + T G+ AA + + H+ I + DV
Sbjct: 85 GPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVF 144
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V ++ ++ Y K A VF + E R VSW ++I G ++L +R M
Sbjct: 145 VGSSLMNMYCKAGLTPEARKVFDTMPE--RNSVSWATMISGYASQKLAAEALGLFRLMRR 202
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+ + S+LS+ PE + G+ +H + G VSV N L++MY+KCG +D
Sbjct: 203 EEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDD 262
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A F+ D+ ++W+AMI+GYAQ GD D+AL+LF +M +G P T + +I+ C
Sbjct: 263 ALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSD 322
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
GA GK +Y G + + V AL+DMY+KC SI DAR+ F L E +V WT+M
Sbjct: 323 LGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSM 382
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G NGE +AL L+ +M + PN +T +VL+AC+ LE+G + T Y
Sbjct: 383 IGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQG-KQIHARTVKYG 441
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
E+ S ++ + + G LK+ + MP + D W ++
Sbjct: 442 FGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR-DVISWNAMI 484
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 11/314 (3%)
Query: 5 SLPPRLNKIYRSSTINQ--WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
SL L SS N W++ I ++ KAL LF M + I P+ TF +
Sbjct: 259 SLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVIN 318
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
AC+ L + +H +++K F S I+V T +VDMYAKC + A K FD + + D+
Sbjct: 319 ACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVL 378
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
W +MI G+ Q G E L L+ M + GI + +T+ + +A L K +H+ +
Sbjct: 379 WTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTV 438
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
G +V + + + YAKC LK LVFR + R V+SWN++I G + ++
Sbjct: 439 KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPA--RDVISWNAMISGLSQNGCGKEA 496
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG----RLVHSHGIHYGFDLDVSVINT 298
L + M +G +PD T V++LS+C + +G R++ +G D V
Sbjct: 497 LELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFD---EFGMDPRVEHYAC 553
Query: 299 LISMYSKCGDIDSA 312
++ + S+ G + A
Sbjct: 554 MVDILSRAGKLKEA 567
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/595 (34%), Positives = 324/595 (54%), Gaps = 6/595 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
+N IR N A+ L+ ++K+ +EP+N T+ F+ + L L
Sbjct: 76 YNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS--- 132
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ + F SD+FV + +V Y K R+ A K+FD M +RD WN M+ G + ++ +
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAI 192
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M GI D TV + + L+L + + +G + V Y
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC +++ A L+F I G +VS+N++I G T ++ + S+ ++ ++ G + + ++
Sbjct: 253 SKCGEIETARLLFGQI--GQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSS 310
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+V L+ L R +H G + SV L ++YS+ +I+SAR LFD
Sbjct: 311 IVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESS 370
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+++ SW AMISGYAQ G ++A+ LF M+ P+ VTV S++S C Q GAL LGKW
Sbjct: 371 EKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW 430
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + N+ V ALIDMY+KCGSI +A+ LF +PEK V+W MI+G L+G
Sbjct: 431 VHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGY 490
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL+LF++M+ + P VTFL+VL AC+HAG + +G F M + P HY+
Sbjct: 491 GHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYA 550
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G L +ALDF++ MP++ +WG LL AC IH++ + + +LFEL+P
Sbjct: 551 CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQ 610
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++NIY+ G + A++R ++KR ++ K PG +L+ + FT D
Sbjct: 611 NVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGD 665
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 2 AASSLPPRLNKIYRS---------STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP 52
A +++ RLN+I + ++ WN+ I KA+ LF+ M+K ++ P
Sbjct: 348 ALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRP 407
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
N +T I ACA+L + +H I + F S+IFV T ++DMYAKC + A +LF
Sbjct: 408 NPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLF 467
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
MP+++ +WNAMI G+ G+ + L LF M + VT + + A HA
Sbjct: 468 SMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHA 523
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 318/594 (53%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + K L LF +MK+ + + + T + K CA +++H +
Sbjct: 19 WNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALAL 78
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S D F+ ++VDMY+KC + A K+F K+ + DV +W+AMI G Q G ++
Sbjct: 79 RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAE 138
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ MR G + + T+ L A + L +S+H G ++D V N I Y
Sbjct: 139 LFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYM 198
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K ++ VF + +VSWN+++ G + M+ +GF+P++ T
Sbjct: 199 KSRCVEDGNKVFEAMTN--PDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTF 256
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S+L SC G+ VH+H I D D V L+ MY+K ++ A FD + +
Sbjct: 257 ISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVN 316
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R SWT +ISGYAQ ++A++ F M+ G P+ T+ S +SGC LE G+
Sbjct: 317 RDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL 376
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
A G ++ V +AL+D+Y KCG + A +F L + +VSW T+I+G + +G+
Sbjct: 377 HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQG 436
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL+ F M+ + P+ TF+ VL AC+ G +E+G F+ M+K+Y +NP + HY+C
Sbjct: 437 EKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYAC 496
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+LGR GK E F++ M + + IW T+L ACK+H N++ GE A +LFE+EP
Sbjct: 497 MVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMM 556
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y+ ++NI+A GRWD V N+R +M +KK PG S V ++G+ F +D
Sbjct: 557 DSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQD 610
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 202/428 (47%), Gaps = 6/428 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R+ + W++ I + +A LF M++ PN T + + D Y Q
Sbjct: 113 RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG I K F SD V ++ MY K ++ K+F+ M + D+ SWNA++ GF
Sbjct: 173 SIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQ 232
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ +FY M L G + + T + + ++ K VH+ I D D V
Sbjct: 233 TCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGT 292
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ YAK L+ A + F + R + SW II G D+ + ++ ++R M +G
Sbjct: 293 ALVDMYAKARCLEDAGVAFDRLVN--RDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGI 350
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+P+ T+ S LS C L GR +H+ + G D+ V + L+ +Y KCG ++ A
Sbjct: 351 KPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEA 410
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F G+ R VSW +ISGY+Q G ++AL F M + G +PD T + ++S C G
Sbjct: 411 IFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGL 470
Query: 375 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS--WTTM 431
+E G K FD+ + G+ ++ ++D+ + G + + +F T S W T+
Sbjct: 471 VEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVK-IFIEEMNLTPYSLIWETV 529
Query: 432 IAGCALNG 439
+ C L+G
Sbjct: 530 LGACKLHG 537
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 206/443 (46%), Gaps = 16/443 (3%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
++ A +LF MP+++ SWNA++ G+AQ+G +KVL LF M+ + T+ + +
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ L K +H+ + G + D + + + Y+KC + A VF I VV
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRN--PDVV 118
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
+W+++I G ++ + M G RP+ T+ SL+S+ L G+ +H
Sbjct: 119 AWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCI 178
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
YGF+ D V N LI MY K ++ +F+ M + VSW A++SG+
Sbjct: 179 CKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGP 238
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
R+F+ M G P++ T +S++ C E GK + D+ V AL+DMY
Sbjct: 239 RIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMY 298
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+K + DA F L + + SWT +I+G A + +A+ F QM ++PN T
Sbjct: 299 AKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLA 358
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY------SCMADLLGRKGKLKEALDF 518
+ L C+H LE G +++ V + H+ S + DL G+ G ++ A
Sbjct: 359 SCLSGCSHMATLENG-------RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAI 411
Query: 519 VQSMPIKSDAGIWGTLLCACKIH 541
+ + I D W T++ H
Sbjct: 412 FKGL-ISRDIVSWNTIISGYSQH 433
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 313/576 (54%), Gaps = 39/576 (6%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYA--KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+H ++++ + D F + + A LD A LFD++P ++ +WN +I +A
Sbjct: 44 VHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASS 103
Query: 134 GFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ +F ++ + + F T + +AA K + +VH I + D+
Sbjct: 104 SDPFQSFVIFLDLLDKCEDLPNKF-TFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLY 162
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N+ + Y C DL MAE +F+GI + VVSWNS+I G+ +D+L + M
Sbjct: 163 ILNSLVRFYGACGDLSMAERLFKGI--SCKDVVSWNSMISAFAQGNCPEDALELFLKMER 220
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+ P+ T+V +LS+C L GR V S+ G +D+++ N ++ MY+KCG +D
Sbjct: 221 ENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDD 280
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME----AAGEV----------- 356
A+ LFD M +R SWT M+ GYA+ GD D A +F AM AA V
Sbjct: 281 AQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKP 340
Query: 357 -----------------PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
PD VT++S +S C Q GA++LG W Y G+ N + ++
Sbjct: 341 KEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISS 400
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+DMY+KCGS+ A E+FY++ E+ V W+ MIAG ++G A+DLF +M E ++PN
Sbjct: 401 LVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPN 460
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VTF VL AC+HAG +++G +F+ M VY V PE+ HY+CM D+LGR G L+EA++ +
Sbjct: 461 SVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELI 520
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
M A +WG LL AC +H N+E+GE + +L +LEP + V ++NIYA GRW+
Sbjct: 521 NEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWE 580
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V+ LR +M+ ++KK PG S + NG F V D
Sbjct: 581 KVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGD 616
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 207/450 (46%), Gaps = 33/450 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ IR ++ ++ ++F + K + PN TFPF+ KA ++L +HG
Sbjct: 93 WNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMA 152
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K F D+++ ++V Y C L A +LF + +DV SWN+MI FAQ E L
Sbjct: 153 IKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDAL 212
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M + + VT++G+ A L + V S+ G+ D+++CN + Y
Sbjct: 213 ELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMY 272
Query: 201 AKCNDLKMAELVFRGIEE-----------------------------GLRTVVSWNSIIG 231
KC + A+ +F + E ++ + +WN +I
Sbjct: 273 TKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLIS 332
Query: 232 GCTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
K ++L + + +PD T+VS LS+C A+ G +H + G
Sbjct: 333 AYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIV 392
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
L+ +I++L+ MY+KCG ++ A +F + +R W+AMI+G G A+ LFF M
Sbjct: 393 LNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEM 452
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
+ A P+ VT +++ C +G ++ G+ +F G+ + ++D+ + G
Sbjct: 453 QEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGF 512
Query: 410 IGDARELFYALPEKTVVS-WTTMIAGCALN 438
+ +A EL + S W ++ C+L+
Sbjct: 513 LEEAMELINEMSTTPSASVWGALLGACSLH 542
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 203/426 (47%), Gaps = 42/426 (9%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWI--SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
LK VH+ + G+ D + SA + + L A +F I + + +WN++I
Sbjct: 41 LKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQP--NLYTWNTLIR 98
Query: 232 G-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ D F + F + P+ T ++ + +A G VH I F
Sbjct: 99 AYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFG 158
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+D+ ++N+L+ Y CGD+ A LF G+ + VSW +MIS +AQ ++AL LF M
Sbjct: 159 MDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKM 218
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
E +P+ VT++ ++S C + LE G+W +Y G+K ++ +CNA++DMY+KCGS+
Sbjct: 219 ERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSV 278
Query: 411 GDARELFYALPEKTVVSWTTMIAGCA-------------------------------LNG 439
DA++LF +PE+ V SWT M+ G A NG
Sbjct: 279 DDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNG 338
Query: 440 EFVEALDLFHQMMELDL-RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
+ EAL +F+++ + +P+ VT ++ L AC G ++ G G+ ++ K + +
Sbjct: 339 KPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKREGIVLNCHL 397
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
S + D+ + G L++AL+ S+ + D +W ++ +H G+ FE++
Sbjct: 398 ISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGR---GKAAIDLFFEMQ 453
Query: 559 PHSAAP 564
P
Sbjct: 454 EAKVKP 459
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 161/361 (44%), Gaps = 36/361 (9%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
S+ RL K + WNS I N AL LF +M++ ++ PN++T + AC
Sbjct: 178 SMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSAC 237
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
AK D + + + +I + D+ + M+DMY KC +D A KLFD+MP+RDV SW
Sbjct: 238 AKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWT 297
Query: 125 AMIVGFAQMGFLE-------------------------------KVLCLFYNMRLVGI-Q 152
M+ G+A+MG + + L +F ++L I +
Sbjct: 298 IMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAK 357
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D VT++ A + L +H + G+ + + ++ + YAKC L+ A V
Sbjct: 358 PDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEV 417
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F +EE R V W+++I G + +++ + M +P+ T ++L +C
Sbjct: 418 FYSVEE--RDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAG 475
Query: 273 ALVQGRL-VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WTAM 330
+ +GR+ H YG ++ ++ + + G ++ A L + M S W A+
Sbjct: 476 LVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGAL 535
Query: 331 I 331
+
Sbjct: 536 L 536
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 135/313 (43%), Gaps = 19/313 (6%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI--SMYSKCGDIDSARFLFDG 318
++S + C + L + VH+ + G D + L S S +D AR LFD
Sbjct: 28 ILSTIDKCSSSKQLKE---VHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQ 84
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFF-AMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ +W +I YA D ++ +F ++ ++P+ T +I + A +
Sbjct: 85 IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRV 144
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G A ++ + N+L+ Y CG + A LF + K VVSW +MI+ A
Sbjct: 145 GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQ 204
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPEL 496
+AL+LF +M ++ PN VT + VL AC LE G W + K +V +L
Sbjct: 205 GNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKV--DL 262
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ M D+ + G + +A MP + D W +L ++G+Y A RL
Sbjct: 263 TLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIMLDGYA-----KMGDYDAARLV- 315
Query: 557 LEPHSAAPYVEMA 569
+A P E+A
Sbjct: 316 ---FNAMPVKEIA 325
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 296/543 (54%), Gaps = 23/543 (4%)
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+L++ M+ + F I + MV+ + R + A +LFDK+ DRDV SWN+MI G
Sbjct: 28 YLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISG 87
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G E+ L ++ M +GI D T++ + + LSL K+VHS I +
Sbjct: 88 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERR 147
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
++ NT + Y+KC DL A VF + G R VVSW S+I G T D ++ + M
Sbjct: 148 INFSNTLLDMYSKCGDLDGALRVFEKM--GERNVVSWTSMIAGYTRDGWSDGAIILLQQM 205
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G + DV + S+L +C +L G+ VH + ++ V N L+ MY+KCG +
Sbjct: 206 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSM 265
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ A +F M + +SW M+ G+L PD T+ ++ C
Sbjct: 266 EGANSVFSTMVVKDIISWNTMV------GELK---------------PDSRTMACILPAC 304
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT
Sbjct: 305 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 364
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MIAG ++G EA+ F++M + + P+ V+F+++L AC+H+G LE+GW +F +M
Sbjct: 365 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKND 424
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P+L HY+CM DLL R G L +A F++++PI DA IWG LLC C+I+ +IE+ E
Sbjct: 425 FNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEK 484
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA R+FELEP + YV +ANIYA +W+ V +R + + ++K PG S + I G+
Sbjct: 485 VAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVN 544
Query: 610 TFT 612
F
Sbjct: 545 LFV 547
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 226/492 (45%), Gaps = 46/492 (9%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V + L ++++M I+ + T + CAK + +H
Sbjct: 80 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLA 139
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS F I T++DMY+KC LD A ++F+KM +R+V SW +MI G+ + G+ + +
Sbjct: 140 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 199
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M G++ D V + + A + L K VH + + +++ VCN + Y
Sbjct: 200 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 259
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC ++ A VF + ++ ++SWN+++G +PD T
Sbjct: 260 AKCGSMEGANSVFSTMV--VKDIISWNTMVG---------------------ELKPDSRT 296
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +L +C AL +G+ +H + + G+ D V N L+ +Y KCG + AR LFD +
Sbjct: 297 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 356
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ VSWT MI+GY G +EA+ F M AG PD V+ +S++ C SG LE G +
Sbjct: 357 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+F ++ + ++D+ S+ G++ A + LP W ++ GC +
Sbjct: 417 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
+ A + ++ EL+ P GY+ L+ +Y +
Sbjct: 477 HDIELAEKVAERVFELE--PENT-------------------GYYVLLANIYAEAEKWEE 515
Query: 499 YSCMADLLGRKG 510
M + +G+KG
Sbjct: 516 VKRMREKIGKKG 527
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 143/340 (42%), Gaps = 73/340 (21%)
Query: 299 LISMYSKCGDI------------------------------------------------- 309
L+S Y+ CGD+
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 310 --DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+SA LFD +CDR +SW +MISGY G + L ++ M G DL T++S++
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
GC +SG L LGK + A + + N L+DMYSKCG + A +F + E+ VVS
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT+MIAG +G A+ L QM + ++ + V ++L AC +G L+ G ++
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG---KDVHD 238
Query: 488 KVYQVNPELNHYSCMA--DLLGRKGKLKEALDFVQSM-------------PIKSDAGIWG 532
+ N N + C A D+ + G ++ A +M +K D+
Sbjct: 239 YIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMA 298
Query: 533 TLLCAC----KIHRNIEIGEYVAYRLFELEPHSAAPYVEM 568
+L AC + R EI Y+ + + H A V++
Sbjct: 299 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 338
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 317/580 (54%), Gaps = 4/580 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+ L LF M+ ++E ++ + F KACA D+ I V+ + FV ++M+
Sbjct: 113 ETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMI 172
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
K ++ A ++FD MP++DV WN++I G+ Q G + LF+ M GI+ +
Sbjct: 173 SFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPI 232
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ L QA +L L K +H + + +G+ D+ V +++ Y+K D++ A VF +
Sbjct: 233 TMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKM 292
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R +VSWN++I GC +S + + ++ D+TT+VSLL C +L
Sbjct: 293 PT--RNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLAT 350
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+++H I F+ ++ + ++ +YSKCG + A F+F+ M DR ++WTAM+ G AQ
Sbjct: 351 GKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQ 409
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G ++ALRLF M+ G + VT +S++ C G+L+ G+ + G +++
Sbjct: 410 NGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVN 469
Query: 397 CNALIDMYSKCGSIGDARELF-YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
AL+DMY+KCG I A +F + K VV W +MI G ++G +A+ ++H+M+E
Sbjct: 470 MTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEG 529
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
L+PN+ TFL++L AC+H+ +E+G FN M + + + P HY+C+ DLL R G+ +EA
Sbjct: 530 LKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEA 589
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
++ MP + + LL C+ H+NI +G + +L L+ + Y+ ++NIYA
Sbjct: 590 QALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEA 649
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
RWD V +R +M+ +KK PG SLV TF D
Sbjct: 650 RRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGD 689
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 210/437 (48%), Gaps = 6/437 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I V A LF M + I+P+ +T + +AC + + + +HG+++
Sbjct: 199 WNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL 258
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+DI V T+ VDMY+K ++ A +F KMP R++ SWNAMI G + G + +
Sbjct: 259 GLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFD 318
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ + D T++ L Q L+ K +H I ++++ + + Y+
Sbjct: 319 LFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYS 377
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC LK A VF +++ R V++W +++ G +D+L + M +G + T
Sbjct: 378 KCGSLKQATFVFNRMKD--RNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTF 435
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD-GMC 320
VSL+ SC +L +GR +H H GF D+ + L+ MY+KCG I+ A +F G
Sbjct: 436 VSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSI 495
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ V W +MI+GY G +A+ ++ M G P+ T LS++S C S +E G
Sbjct: 496 SKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGIS 555
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
F++ ++ L+D+ S+ G +A+ L +P + +++GC +
Sbjct: 556 LFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTH 615
Query: 439 GEFVEALDLFHQMMELD 455
+ +++ LD
Sbjct: 616 KNINLGIQTSDKLLALD 632
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 172/350 (49%), Gaps = 8/350 (2%)
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI--EEGLRTVVS 225
+K+L +KS H+ I + D V + AY+ L+ A VF +GL
Sbjct: 42 SKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLC--- 98
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
N+++ G ++ ++L + M D + L +C G + S +
Sbjct: 99 -NAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAV 157
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
G + + V +++IS K G I A+ +FDGM ++ V W ++I GY Q G D A +
Sbjct: 158 EKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQ 217
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LFF M +G P +T+ S+I CG G L+LGK Y GL ++++V + +DMYS
Sbjct: 218 LFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYS 277
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
K G I AR +FY +P + +VSW MI+GC NG E+ DLFH+++ + T ++
Sbjct: 278 KMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVS 337
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+LQ C+ L G + ++ N L+ + + DL + G LK+A
Sbjct: 338 LLQGCSQTASLATGKILHGCAIRSFESNLILS--TAIVDLYSKCGSLKQA 385
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 198/578 (34%), Positives = 318/578 (55%), Gaps = 3/578 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
+L LF +M++ ++ P+ + AC+ L + IH ++++ D+ V ++D
Sbjct: 214 SLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLID 273
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
Y KC+R+ KLFD+M +++ SW MI G+ Q F + + LF M +G + D
Sbjct: 274 FYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFA 333
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + + L + VH++ I +++D V N I YAK N L A+ VF +
Sbjct: 334 CTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMA 393
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E + V+S+N++I G + +K ++L + M F P + T VSLL AL
Sbjct: 394 E--QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELS 451
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+ +H I +G LD+ + LI +YSKC + AR +F+ M ++ V W AM GY Q
Sbjct: 452 KQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQH 511
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
+ +EAL+L+ ++ + + P+ T ++I+ +L G+ F N GL V
Sbjct: 512 LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 571
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NAL+DMY+KCGSI +AR++F + + VV W +MI+ A +GE EAL +F +MM+ ++
Sbjct: 572 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 631
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VTF+AVL AC+HAG +E G +FN M + + P HY+C+ LLGR GKL EA +
Sbjct: 632 PNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKE 690
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F++ MPI+ A +W +LL AC+I N+E+G+Y A +P + Y+ ++NI+A G
Sbjct: 691 FIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGM 750
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W V +R M ++V K PG+S + +N K F D
Sbjct: 751 WADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARD 788
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/494 (30%), Positives = 254/494 (51%), Gaps = 5/494 (1%)
Query: 49 DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
++ P F + + + ++ ++IHG I+ S SD F+ ++++ +K DR+D A
Sbjct: 22 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIH 167
+FDKMP +++ +W++M+ ++Q G+ E+ L +F ++ R G + + + +A
Sbjct: 82 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 141
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ +H F + G D DV V + I Y+K +++ A LVF + E +T V+W
Sbjct: 142 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE--KTAVTWT 199
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+II G T + SL + M PD V S+LS+C E L G+ +H++ +
Sbjct: 200 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 259
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G ++DVSV+N LI Y+KC + + R LFD M + +SWT MISGY Q EA++LF
Sbjct: 260 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 319
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD S+++ CG ALE G+ Y L+ + V N LIDMY+K
Sbjct: 320 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 379
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ DA+++F + E+ V+S+ MI G + + EAL+LFH+M P+ +TF+++L
Sbjct: 380 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 439
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
LE L+ K + V+ +L S + D+ + +K+A + M K D
Sbjct: 440 GVSASLFALELSKQIHGLIIK-FGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-D 497
Query: 528 AGIWGTLLCACKIH 541
+W + H
Sbjct: 498 IVVWNAMFFGYTQH 511
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 261/527 (49%), Gaps = 9/527 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+S + + + +AL++F +++ E PN + +AC +L +HG +
Sbjct: 96 WSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFV 155
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+S F D++V T+++D Y+K ++ A +FD++ ++ +W +I G+ + G L
Sbjct: 156 VRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSL 215
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF MR + D V + A + L K +H++ + G + DVSV N I Y
Sbjct: 216 ELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFY 275
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRPDVT 259
KCN +K +F + ++ ++SW ++I G + FD +++ + M G++PD
Sbjct: 276 TKCNRVKAGRKLFDQMV--VKNIISWTTMISGYMQ-NSFDWEAMKLFGEMNRLGWKPDGF 332
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
S+L+SC EAL QGR VH++ I + D V N LI MY+K + A+ +FD M
Sbjct: 333 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 392
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ +S+ AMI GY+ + L EAL LF M P L+T +S++ ALEL K
Sbjct: 393 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSK 452
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G+ ++ +ALID+YSKC + DAR +F + EK +V W M G +
Sbjct: 453 QIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHL 512
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNH 498
E EAL L+ + +PN TF A++ A ++ L G + N + K+ P + +
Sbjct: 513 ENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN 572
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ D+ + G ++EA S I D W +++ H E
Sbjct: 573 --ALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAE 616
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 210/423 (49%), Gaps = 3/423 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I W + I + + +A+ LF M + +P+ + +C + +H
Sbjct: 295 NIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVH 354
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ +K+ SD FV+ ++DMYAK + L A K+FD M +++V S+NAMI G++ L
Sbjct: 355 AYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLS 414
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF+ MR+ +T + L + L L K +H I GV D+ + I
Sbjct: 415 EALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALI 474
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC+ +K A VF + E + +V WN++ G T + +++L Y + + +P+
Sbjct: 475 DVYSKCSYVKDARHVFEEMNE--KDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPN 532
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T +L+++ +L G+ H+ + G D V N L+ MY+KCG I+ AR +F+
Sbjct: 533 EFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFN 592
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
R V W +MIS +AQ G+ +EAL +F M G P+ VT ++++S C +G +E
Sbjct: 593 SSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVED 652
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCA 436
G N G+K ++ + + G + +A+E +P E + W ++++ C
Sbjct: 653 GLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACR 712
Query: 437 LNG 439
+ G
Sbjct: 713 IAG 715
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 164/372 (44%), Gaps = 36/372 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I + + +AL LF M+ P+ LTF + A L S+ IHG I+
Sbjct: 400 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 459
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+F + ++D+Y+KC + A +F++M ++D+ WNAM G+ Q E+ L
Sbjct: 460 KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 519
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ ++ + + T L AA + L + H+ + +G+D V N + YA
Sbjct: 520 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 579
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F R VV WNS+I + +++L +R M+ +G +P+ T
Sbjct: 580 KCGSIEEARKMFNS--SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTF 637
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V++LS+C H+ + G + N++ K G
Sbjct: 638 VAVLSAC-----------SHAGRVEDGLNH----FNSMPGFGIKPGT------------- 669
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ ++S + G L EA M P + S++S C +G +ELGK+
Sbjct: 670 ---EHYACVVSLLGRSGKLFEAKEFIEKMPIE---PAAIVWRSLLSACRIAGNVELGKYA 723
Query: 382 DNYACSGGLKDN 393
A S KD+
Sbjct: 724 AEMAISTDPKDS 735
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 332/643 (51%), Gaps = 82/643 (12%)
Query: 49 DIEPNNLTFPF--IAKACAKLS-DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRL 105
D+ ++ PF + +C KL + + +H ++KS F +++F+Q ++D YAKC L
Sbjct: 12 DLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSL 71
Query: 106 DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT----VMGL 161
+ +LFDKMP R+V +WN+++ G ++GFL++ LF +M + D T V G
Sbjct: 72 EDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGF 127
Query: 162 TQ-----------AAIHAKHLSLLK--------------------SVHSFGIHIGVDADV 190
Q A +H + L + +HS +DV
Sbjct: 128 AQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDV 187
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+ + + Y+KC ++ A+ VF E G R VVSWNS+I ++L ++ M+
Sbjct: 188 YIGSALVDMYSKCGNVNDAQQVFD--EMGDRNVVSWNSLITCYEQNGPAVEALKVFQVML 245
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDI 309
PD T+ S++S+C A+ G+ VH+ + D+ + N + MY+KC I
Sbjct: 246 ESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRI 305
Query: 310 DSARFLFDGM-------------------------------CDRTRVSWTAMISGYAQKG 338
ARF+FD M +R VSW A+I+GY Q G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------D 392
+ +EAL LF ++ P T +++ C L LG + G K D
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEED 425
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
++ V N+LIDMY KCG + + +F + E+ VSW MI G A NG EAL+LF +M+
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ +P+ +T + VL AC HAGF+E+G YF+ MT+ + V P +HY+CM DLLGR G L
Sbjct: 486 DSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIY 572
+EA ++ MP++ D+ IWG+LL ACK+HRNI +G+YVA +LFE+E ++ PYV ++N+Y
Sbjct: 546 EEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMY 605
Query: 573 ALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A G+W N+R +M++ V K PG S + I G F V+D
Sbjct: 606 AELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKD 648
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 225/458 (49%), Gaps = 44/458 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + +AL F M K N TF AC+ L+D IH I
Sbjct: 120 WNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIA 179
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KSP SD+++ + +VDMY+KC ++ A ++FD+M DR+V SWN++I + Q G + L
Sbjct: 180 KSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALK 239
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAY 200
+F M ++ D VT+ + A + + + VH+ + + + D+ + N ++ Y
Sbjct: 240 VFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMY 299
Query: 201 AKCNDLKMAELVFRGI-----------------------------EEGLRTVVSWNSIIG 231
AKC+ +K A +F + + R VVSWN++I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G T + +++L+ + + + P T ++L +C L G H H + +GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKF 419
Query: 292 ------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
D+ V N+LI MY KCG ++ +F M +R VSW AMI G+AQ G +EAL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG---LKDNVMVCNALI 401
LF M +GE PD +T++ ++S CG +G +E G+ +F + G L+D+ ++
Sbjct: 480 LFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY---TCMV 536
Query: 402 DMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
D+ + G + +A+ + +P + V W +++A C ++
Sbjct: 537 DLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 184/442 (41%), Gaps = 98/442 (22%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I A +AL +F+ M ++ +EP+ +T + ACA LS Q +H +V
Sbjct: 221 WNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVV 280
Query: 82 K-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP------------------------ 116
K +DI + VDMYAKC R+ A +FD MP
Sbjct: 281 KMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAAR 340
Query: 117 -------DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAA---- 165
+R+V SWNA+I G+ Q G E+ L LF ++ + T + +A
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLA 400
Query: 166 -IH---AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+H H+ +LK H F G + D+ V N+ I Y KC ++ LVFR + E R
Sbjct: 401 DLHLGMQAHVHVLK--HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME--R 456
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VSWN++I G +++L +R M+ G +PD T++ +LS+C
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACG------------ 504
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR-----TRVSWTAMISGYAQ 336
H GF ++ R F M R +T M+ +
Sbjct: 505 ----HAGF-------------------VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW-----FDNYACSGGLK 391
G L+EA + M PD V S+++ C + LGK+ F+ + G
Sbjct: 542 AGFLEEAKSIIEEMPVQ---PDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSG-- 596
Query: 392 DNVMVCNALIDMYSKCGSIGDA 413
V++ N MY++ G GDA
Sbjct: 597 PYVLLSN----MYAELGKWGDA 614
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 9/176 (5%)
Query: 1 MAASSLPPRL--NKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFP 58
MAAS+ RL K+ + ++ WN+ I E +AL LF +K+ + P + TF
Sbjct: 332 MAASTKAARLMFTKMAERNVVS-WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFA 390
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPF------WSDIFVQTTMVDMYAKCDRLDCAYKLF 112
I KACA L+D H H++K F DIFV +++DMY KC ++ Y +F
Sbjct: 391 NILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
KM +RD SWNAMI+GFAQ G+ + L LF M G + D +T++G+ A HA
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHA 506
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 329/611 (53%), Gaps = 8/611 (1%)
Query: 11 NKIYRSST---INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
K++ ST I WN+ + V + + + +F+ M++ D+E ++ TF + AC L
Sbjct: 382 KKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINL 441
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +H +K+ +D+FV M+DMY+K +D A LF +P +D SWNA+I
Sbjct: 442 DSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALI 501
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
VG A E+ + + M+ GI D V+ A + + K +H I V
Sbjct: 502 VGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVC 561
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
++ +V ++ I Y+K D++ + V ++ ++V N++I G ++ D+++ ++
Sbjct: 562 SNHAVGSSLIDLYSKFGDVESSRKVLAHVDAS--SMVPINALITGLVQNNREDEAIELFQ 619
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKC 306
++ DGF+P T S+LS C P + V G+ VHS+ + + D S+ +L+ +Y KC
Sbjct: 620 QVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKC 679
Query: 307 GDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
++ A L + D + V WTA ISGYAQ G D++L +F+ M + D T S+
Sbjct: 680 KLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASV 739
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-T 424
+ C + AL GK G +AL+DMYSKCG + + E+F L K
Sbjct: 740 LKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQN 799
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
++ W +MI G A NG EAL LF +M E L+P+ VT L VL AC+HAG + +G F+
Sbjct: 800 IMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFD 859
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
M++VY + P ++HY+C+ DLLGR G L+EA + + +P ++D IW T L AC++H++
Sbjct: 860 SMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDE 919
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
E G+ A +L E+EP ++ YV +++++A G W R M+ V KFPG S + +
Sbjct: 920 ERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITV 979
Query: 605 NGKTCTFTVED 615
KT F V+D
Sbjct: 980 GNKTNLFVVQD 990
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 263/528 (49%), Gaps = 6/528 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L +I ST+ WN+ I + L++ MK+ + P TF + A A ++
Sbjct: 284 LKRIQMPSTV-AWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTA 342
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
F Q IH VK +++FV ++++++Y K + A K+FD ++++ WNAM+ G
Sbjct: 343 FDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYG 402
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F Q E+ + +F MR ++AD T + + A I+ L + + VH I +DAD
Sbjct: 403 FVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDAD 462
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V N + Y+K + +A+ +F I + VSWN++I G + ++ ++++ + M
Sbjct: 463 LFVANAMLDMYSKLGAIDVAKALFSLIPG--KDSVSWNALIVGLAHNEEEEEAVYMLKRM 520
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
G PD + + +++C A G+ +H I Y + +V ++LI +YSK GD+
Sbjct: 521 KCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDV 580
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+S+R + + + V A+I+G Q DEA+ LF + G P T S++SGC
Sbjct: 581 ESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGC 640
Query: 370 GQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVS 427
+ +GK +Y S L + + +L+ +Y KC + DA +L +P+ K +V
Sbjct: 641 TGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVE 700
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT I+G A NG ++L +F +M D+R + TF +VL+AC+ L G L+
Sbjct: 701 WTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLII 760
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K V+ E S + D+ + G + + + + + K + W +++
Sbjct: 761 KSGFVSYE-TAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMI 807
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 200/428 (46%), Gaps = 37/428 (8%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P+ + AC++L + +H ++KS F S F Q +VDMYAKC + A ++
Sbjct: 158 PDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRV 217
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
FD + D W +MI G+ ++G ++ L LF M +G D VT +
Sbjct: 218 FDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYV------------ 265
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
T IS A L A + + I+ + + V+WN++I
Sbjct: 266 -----------------------TIISTLASMGRLSDARTLLKRIQ--MPSTVAWNAVIS 300
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ + Y+ M G P +T S+LS+ A +G+ +H+ + +G D
Sbjct: 301 SYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDA 360
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V V ++LI++Y K G I A+ +FD ++ V W AM+ G+ Q +E +++F M
Sbjct: 361 NVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMR 420
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
A D T +S++ C +L++G+ + ++ V NA++DMYSK G+I
Sbjct: 421 RADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAID 480
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A+ LF +P K VSW +I G A N E EA+ + +M + P+ V+F + AC+
Sbjct: 481 VAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACS 540
Query: 472 HAGFLEKG 479
+ E G
Sbjct: 541 NIRATETG 548
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
F R G PD + +LS+C AL QGR VH + GF L+ MY+
Sbjct: 147 FQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYA 206
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KC ++ AR +FDG+ + W +MI+GY + G +AL LF ME G PD VT ++
Sbjct: 207 KCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVT 266
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+IS + G + DAR L + +
Sbjct: 267 IIS-----------------------------------TLASMGRLSDARTLLKRIQMPS 291
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
V+W +I+ + +G E L+ M L P R TF ++L A ++G
Sbjct: 292 TVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEG 346
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 10/214 (4%)
Query: 271 PEALVQGR---LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFLFDGMCDRTRVS 326
P Q R ++H+ + G L + + L+ +Y + G + A R L G C S
Sbjct: 66 PHRTHQARACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRAL--GCCTGAPAS 123
Query: 327 WTA---MISGYAQKGDLDEALRLFFAMEAA-GEVPDLVTVLSMISGCGQSGALELGKWFD 382
A ++S +A+ G + L F + + G PD + ++S C + GALE G+
Sbjct: 124 GAAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVH 183
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
G + L+DMY+KC + DAR +F + + W +MIAG G +
Sbjct: 184 CDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQ 243
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
+AL LF +M ++ P++VT++ ++ G L
Sbjct: 244 QALALFSRMEKMGSAPDQVTYVTIISTLASMGRL 277
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 210/655 (32%), Positives = 337/655 (51%), Gaps = 62/655 (9%)
Query: 21 QWNSQIRE-AVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
+WNS + E H L +F+ + + ++ + K C ++ D IHG
Sbjct: 640 KWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGC 699
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
++K F D++++ +++ Y +C L+ A ++F +MP+ + WN I+ Q L+K
Sbjct: 700 LIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKG 759
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF M+ ++A+ T++ + QA L+ K +H + G+D+DVS+CN IS
Sbjct: 760 VELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISM 819
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG--------------------------- 232
Y+K L++A VF +E R SWNS+I
Sbjct: 820 YSKNGKLELARRVFDSMEN--RNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIV 877
Query: 233 ---CTYGDKF-----DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
C F ++ LN + M +GF+P+ +++ S+L + L G+ H +
Sbjct: 878 TWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYV 937
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ GFD DV V +LI MY K + SA+ +FD M +R +W +++SGY+ KG ++AL
Sbjct: 938 LRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 997
Query: 345 RLFFAMEAAGEVPDLVTVLSMISG------------------------CGQSGALELGKW 380
RL ME G PDLVT MISG C L+ GK
Sbjct: 998 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKE 1057
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G ++V V ALIDMYSK S+ +A ++F + KT+ SW MI G A+ G
Sbjct: 1058 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGL 1117
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA+ +F++M ++ + P+ +TF A+L AC ++G + +GW YF+ M Y++ P L HY
Sbjct: 1118 GKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYC 1177
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G L EA D + +MP+K DA IWG LL +C+IH+N+ E A LF+LEP+
Sbjct: 1178 CMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPN 1237
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++A Y+ M N+Y++ RW+ + +LR +M V+ S + IN + F+ ++
Sbjct: 1238 NSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDE 1292
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 17/290 (5%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDS-------LNFYRH 248
IS+Y D A +VF GL R + WNS + ++F S L ++
Sbjct: 614 ISSYLGFGDFWSAAMVFY---VGLPRNYLKWNSFV------EEFKSSAGSLHIVLEVFKE 664
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+ G D L +C + G +H I GFDLDV + L++ Y +C
Sbjct: 665 LHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG 724
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
++ A +F M + + W I Q L + + LF M+ + + T++ ++
Sbjct: 725 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 784
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
CG+ GAL K Y GL +V +CN LI MYSK G + AR +F ++ + SW
Sbjct: 785 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 844
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+MI+ A G +A LF+++ D++P+ VT+ +L G+ E+
Sbjct: 845 NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEE 894
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE----------------------- 51
++ I WNS + K AL L +M+K I+
Sbjct: 973 KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAF 1032
Query: 52 -PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
PN+ + + +ACA LS + IH +++ F D+FV T ++DMY+K L A+K
Sbjct: 1033 MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHK 1092
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
+F ++ ++ +ASWN MI+GFA G ++ + +F M+ VG+ D +T L A
Sbjct: 1093 VFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSA 1146
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 15/248 (6%)
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY-AQKGDLDEALRLFFAMEAAGE 355
LIS Y GD SA +F R + W + + + + G L L +F + G
Sbjct: 611 KNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGV 670
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
V D + C + + LG G +V + AL++ Y +C + A +
Sbjct: 671 VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQ 730
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F+ +P + W I + + + ++LF +M L+ T + VLQAC G
Sbjct: 731 VFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGA 790
Query: 476 LEKG---WGY---FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
L GY F L + V NP ++ YS + GKL+ A SM ++ +
Sbjct: 791 LNAAKQIHGYVFRFGLDSDVSLCNPLISMYS-------KNGKLELARRVFDSMENRNTSS 843
Query: 530 IWGTLLCA 537
W +++ +
Sbjct: 844 -WNSMISS 850
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 316/586 (53%), Gaps = 12/586 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + AL +F +M + P T + +C + + IHG +
Sbjct: 122 WNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGI 181
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS D V+ + MYAKC L A LF+++ ++ SWN MI + Q G ++ +
Sbjct: 182 KSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAML 241
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ ++ ++VT++ L A H L S H + I G D SV + + +YA
Sbjct: 242 VFKQMQKERVEVNYVTIISLLSANAH------LDSTHCYVIKTGFATDASVITSLVCSYA 295
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL--NFYRHMIYDGFRPDVT 259
C +++ A L++ + + R +VS ++I G Y +K + L + M+ +PD
Sbjct: 296 GCGNIESAGLLYNLMPQ--RNLVSLTAMISG--YAEKGNMGLVVECFTQMLQLKMKPDAV 351
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+VS+L P + G +H++G+ G D V+N LISMYSK GDI++ LF M
Sbjct: 352 AMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEM 411
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ +SW ++IS Q G +A+ LF M G PD +T+ S+++GC + G L+ G+
Sbjct: 412 GEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGE 471
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
NY L + AL+DMY KCG + A +F ++ E + +W TMI+G L+G
Sbjct: 472 RLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSG 531
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
AL + +M E L+P+R+TFL VL ACTH G + +G YF M + + + P L H
Sbjct: 532 HEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHN 591
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLL R G L+EA+ FV++M ++ D+ IWG LL +C IH+ +++GE +A RL L+
Sbjct: 592 ACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDY 651
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+S YV M+N+YA GRWD VA +R MMK G SL+ ++
Sbjct: 652 YSGGLYVLMSNLYASKGRWDDVARVRKMMKDTGGDGSSGISLIEVS 697
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 261/530 (49%), Gaps = 18/530 (3%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ I H+ KS F +++ T +D Y K + A LF++MP RDV SWNA+I G+++
Sbjct: 72 ANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSR 131
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G+ L +F M G T++GL + + K++H FGI G+D D V
Sbjct: 132 NGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRV 191
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N S YAKC DL+ AE++F I E +T VSWN++IG FD+++ ++ M +
Sbjct: 192 KNALTSMYAKCADLQAAEVLFEEIFE--KTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKE 249
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+ T++SLLS+ ++ H + I GF D SVI +L+ Y+ CG+I+SA
Sbjct: 250 RVEVNYVTIISLLSANAHLDS------THCYVIKTGFATDASVITSLVCSYAGCGNIESA 303
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
L++ M R VS TAMISGYA+KG++ + F M PD V ++S++ G
Sbjct: 304 GLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDP 363
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
+ G Y GL + +V N LI MYSK G I LF + EK ++SW ++I
Sbjct: 364 TFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVI 423
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+ C G +A++LF QM P+ +T ++L C+ GFL+ G L V +
Sbjct: 424 SACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGE---RLHNYVLRN 480
Query: 493 NPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI--HRNIEIGE 548
N ++ + + + D+ + G+L+ A +S+ A W T++ + H + +
Sbjct: 481 NLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLA-TWNTMISGYGLSGHEHRALSC 539
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
Y + L+P ++ G W+G R+M R PG
Sbjct: 540 YSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSM--REDFGMIPG 587
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 100/198 (50%)
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
++ + +H GF+ V + + Y K G I A+ LF+ M R VSW A+I GY
Sbjct: 70 IEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGY 129
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
++ G +AL +F M G P T++ ++ CG+ + GK + GL +
Sbjct: 130 SRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDC 189
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V NAL MY+KC + A LF + EKT VSW TMI NG F EA+ +F QM +
Sbjct: 190 RVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKE 249
Query: 455 DLRPNRVTFLAVLQACTH 472
+ N VT +++L A H
Sbjct: 250 RVEVNYVTIISLLSANAH 267
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 322/591 (54%), Gaps = 7/591 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I +A LF M++ I+P+++T + ++L+ + Q +HG +
Sbjct: 138 WTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELA---HVQCLHGSAI 194
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F SDI + +M+ MY KC ++ + KLFD M RD+ SWN+++ +AQ+G++ +VL
Sbjct: 195 LYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLL 254
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L MR+ G + D T + A L L + +H + D D V + I Y
Sbjct: 255 LLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYL 314
Query: 202 KCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
K ++ +A FR E L + VV W ++I G D +L +R M+ G + T
Sbjct: 315 KGGNIDIA---FRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTAT 371
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S++++C + G VH + + +D++ N+L++M++KCG +D + +FD M
Sbjct: 372 MASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMN 431
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R VSW AMI+GYAQ G + +AL LF M + + PD +T++S++ GC +G L LGKW
Sbjct: 432 KRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKW 491
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
++ GL+ ++V +L+DMY KCG + A+ F +P +VSW+ +I G +G+
Sbjct: 492 IHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGK 551
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL + + +E ++PN V FL+VL +C+H G +E+G + MT+ + + P L H++
Sbjct: 552 GETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHA 611
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R G+++EA + + + G +L AC+ + N E+G+ +A + L+P
Sbjct: 612 CVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPM 671
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
A +V++A+ YA +W+ V T M+ +KK PG S + I+G TF
Sbjct: 672 DAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTF 722
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 236/464 (50%), Gaps = 5/464 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S+TIN +N+ I + + L + M K + + TFP + KAC+ L+ F
Sbjct: 31 SATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLS 90
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H I+ S D ++ +++++ YAK D A K+FD MP+R+V W ++I +++ G
Sbjct: 91 LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGR 150
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + LF MR GIQ VT++ L H+ L H I G +D+++ N+
Sbjct: 151 VPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCL---HGSAILYGFMSDINLSNS 207
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+S Y KC +++ + +F +++ R +VSWNS++ + L + M GF
Sbjct: 208 MLSMYGKCRNIEYSRKLFDYMDQ--RDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFE 265
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD T S+LS L GR +H + FDLD V +LI MY K G+ID A +
Sbjct: 266 PDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRM 325
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ D+ V WTAMISG Q G D+AL +F M G T+ S+I+ C Q G+
Sbjct: 326 FERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSY 385
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
LG Y L ++ N+L+ M++KCG + + +F + ++ +VSW MI G
Sbjct: 386 NLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGY 445
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A NG +AL LF++M P+ +T +++LQ C G L G
Sbjct: 446 AQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLG 489
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 323/596 (54%), Gaps = 3/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V+ AL + MK+ + +F I K A + Q +H +V
Sbjct: 68 WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMV 127
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++F + ++DMYAKC+R++ A+++F + R+ +WNA+I G+AQ+G
Sbjct: 128 KMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFW 187
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M L G++ D T L L VH+ + G+ +D +VCN I+AY+
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C ++ AE VF G E R +V+WNS++ ++ +++ + M GF PD+ T
Sbjct: 248 ECGSIEDAERVFDGAIE-TRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTY 306
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY--SKCGDIDSARFLFDGM 319
S++S+ QG+ +H I G + V + N+LI+MY S +D A +F+ +
Sbjct: 307 TSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL 366
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ VSW ++++G++Q G ++AL+ F M + V D +++ C L+LG+
Sbjct: 367 ENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 426
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G + N V ++LI MYSKCG I DAR+ F A P+ + ++W ++I G A +G
Sbjct: 427 QVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 486
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
ALDLF M + ++ + +TF+AVL AC+H G +E+GW + M Y + P + HY
Sbjct: 487 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 546
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLLGR G+L EA +++MP + DA +W TLL AC+ +IE+ VA L ELEP
Sbjct: 547 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEP 606
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV +++++ RW+ A+++ +MK VKK PG S + + + +F ED
Sbjct: 607 EEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAED 662
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 243/542 (44%), Gaps = 29/542 (5%)
Query: 12 KIYRSSTINQ---WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
++++S I WN+ I + A L M+ +E ++ TF +
Sbjct: 156 EVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPD 215
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD-KMPDRDVASWNAMI 127
+ +H IVK SD V ++ Y++C ++ A ++FD + RD+ +WN+M+
Sbjct: 216 LHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSML 275
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
+ E+ LF M+++G + D T + AA H KS+H I G++
Sbjct: 276 AAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLE 335
Query: 188 ADVSVCNTWISAYAKCNDLKMAEL--VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
V + N+ I+ Y K + M E +F +E + VSWNSI+ G + +D+L F
Sbjct: 336 FLVPISNSLIAMYLKSHSKSMDEALNIFESLEN--KDHVSWNSILTGFSQSGLSEDALKF 393
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ +M D ++L SC L G+ VH + GF+ + V ++LI MYSK
Sbjct: 394 FENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSK 453
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG I+ AR FD + ++W ++I GYAQ G AL LFF M+ D +T +++
Sbjct: 454 CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAV 513
Query: 366 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 423
++ C G +E G + + G+ + +ID+ + G + +A+ L A+P E
Sbjct: 514 LTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEP 573
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL--------------AVLQA 469
+ W T++ C G+ A + ++EL+ + L A ++
Sbjct: 574 DAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKR 633
Query: 470 CTHAGFLEK--GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA---LDFVQSMPI 524
++K GW + + +V N E + ++ R G+L E LD+V + I
Sbjct: 634 LMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYVANSEI 693
Query: 525 KS 526
S
Sbjct: 694 MS 695
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 194/408 (47%), Gaps = 9/408 (2%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +KS + I+ ++ YAKC + A K+F + RD SWN MI GF +G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E L +M+ G D + + + ++ + + VHS + +G + +V +
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH--MIYDGF 254
+ YAKC ++ A VF+ I +R V+WN++I G Y D F+ M +G
Sbjct: 142 LDMYAKCERVEDAFEVFKSI--NIRNSVTWNALISG--YAQVGDRGTAFWLLDCMELEGV 197
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
D T LL+ P+ VH+ + +G D +V N +I+ YS+CG I+ A
Sbjct: 198 EIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAER 257
Query: 315 LFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FDG + R V+W +M++ Y +EA +LF M+ G PD+ T S+IS +
Sbjct: 258 VFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGS 317
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMY--SKCGSIGDARELFYALPEKTVVSWTTM 431
GK GL+ V + N+LI MY S S+ +A +F +L K VSW ++
Sbjct: 318 HQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSI 377
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ G + +G +AL F M + + F AVL++C+ L+ G
Sbjct: 378 LTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLG 425
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 170/361 (47%), Gaps = 7/361 (1%)
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H I G A + N IS YAKC ++++A +F E R VSWN++I G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFG--ETSQRDAVSWNTMIAGFVNLG 79
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
F+ +L F + M GF D + S+L C + G+ VHS + G++ +V +
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGS 139
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MY+KC ++ A +F + R V+W A+ISGYAQ GD A L ME G
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEI 199
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T +++ +L GL + VCNA+I YS+CGSI DA +F
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259
Query: 418 -YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
A+ + +V+W +M+A +N + EA LF +M L P+ T+ +V+ A
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQ 319
Query: 477 EKGWGYFNLMTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+G L+ K + + P N M L + EAL+ +S+ K D W ++
Sbjct: 320 GQGKSLHGLVIKRGLEFLVPISNSLIAMY-LKSHSKSMDEALNIFESLENK-DHVSWNSI 377
Query: 535 L 535
L
Sbjct: 378 L 378
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL + + H I G + N +IS Y+KCG+I A +F R VSW MI+
Sbjct: 14 ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIA 73
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G+ G+ + AL +M+ G D + S++ G G +E+G+ + G +
Sbjct: 74 GFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
NV +AL+DMY+KC + DA E+F ++ + V+W +I+G A G+
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGD 181
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 328/622 (52%), Gaps = 31/622 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V N L +F+ M+K + + + + K+CA L D +H H +
Sbjct: 250 WSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHAL 309
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F D V+T +DMYAKC+ + A +LFD + ++ S+NAMI G++Q + L
Sbjct: 310 KSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALL 369
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF + + D +++ G +A K LS +H ++ V N +I Y
Sbjct: 370 LFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYG 429
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF E G + VSWN+II ++ +LN M+ G PD T
Sbjct: 430 KCEALDEACRVFD--EMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTF 487
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD---- 317
S+L +C ++L G +H+ + G + + ++L+ MYSKCG ID A + +
Sbjct: 488 GSVLKACA-GDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFI 546
Query: 318 -------------------GMCDRTR----VSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
G+ DR VSW A+ISGY + ++A R F M G
Sbjct: 547 GIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMG 606
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
PD T +++ C ++ LGK + L+ +V +C+ L+DMYSKCG++ D+R
Sbjct: 607 ITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSR 666
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F P + V+W MI G A +G EA+ LF M+ +++ PN TF+++L+AC H G
Sbjct: 667 LMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMG 726
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+E+G YF++M K Y ++P L HYS M D+LG+ G++++AL+ +Q MP ++D IW TL
Sbjct: 727 LVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTL 786
Query: 535 LCACKIHR-NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
L ACKI+R N+E E A L L+P ++ Y+ ++NIYA G WD + LRT M+ +++
Sbjct: 787 LSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKL 846
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
KK PG S V I + TF V D
Sbjct: 847 KKEPGCSWVEIRDEFHTFLVGD 868
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 262/564 (46%), Gaps = 40/564 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + E +++ +F M ++ +E +N +F I K C+ L ++ IHG +
Sbjct: 149 WNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIAL 208
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + +D+ + ++DMYAKC RLD ++ +F MP ++ SW+A+I G Q FL+ L
Sbjct: 209 RMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLK 268
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ VG+ + ++ L L +H+ + D V + YA
Sbjct: 269 MFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYA 328
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KCN+++ A+ +F + E L + S+N++I G + D +L +R + D ++
Sbjct: 329 KCNNMQDAQRLF-DMSENL-NLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISL 386
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
L +C + L +G +H F ++ V N I MY KC +D A +FD M
Sbjct: 387 SGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGR 446
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A+I+ + Q + + L + +M +G PD T S++ C +L G
Sbjct: 447 KDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEI 505
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL-------------FYALPE------ 422
G+ N + ++L+DMYSKCG I +A ++ + PE
Sbjct: 506 HTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPK 565
Query: 423 --------KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+ +VSW +I+G + + +A F++MME+ + P++ T+ VL C A
Sbjct: 566 GIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTC--AN 623
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWG 532
G G + V + + + Y C + D+ + G L ++ + PI+ D W
Sbjct: 624 LASIGLGK-QIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIR-DFVTWN 681
Query: 533 TLLCACKIHRNIEIGEYVAYRLFE 556
++C H +GE A +LFE
Sbjct: 682 AMICGYAHH---GMGEE-AIKLFE 701
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 219/457 (47%), Gaps = 28/457 (6%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + + + +N+ I K+ +ALLLFR++ K+ + + ++ +ACA +
Sbjct: 338 RLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVK 397
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+HG KS F +I V +DMY KC+ LD A ++FD+M +D SWNA+I
Sbjct: 398 GLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIA 457
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
Q K L + +M G++ D T G A L+ +H+ + +G+ +
Sbjct: 458 AHEQNEERSKTLNILVSMLRSGMEPDEYT-FGSVLKACAGDSLNHGMEIHTTIVKLGMAS 516
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGL-------------------------RTV 223
+ + ++ + Y+KC + AE + I G+ +
Sbjct: 517 NPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMI 576
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWN+II G + +D+ F+ M+ G PD T ++L +C ++ G+ +H+H
Sbjct: 577 VSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAH 636
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
I DV + +TL+ MYSKCG++ +R +F+ R V+W AMI GYA G +EA
Sbjct: 637 VIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEA 696
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALID 402
++LF +M +P+ T +S++ C G +E G +F GL + + ++D
Sbjct: 697 IKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVD 756
Query: 403 MYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+ K G + A EL +P E V W T+++ C +N
Sbjct: 757 ILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKIN 793
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 217/493 (44%), Gaps = 39/493 (7%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
F F+ K CAK + H H++ S F +FV ++ +Y C L A KLFD M
Sbjct: 51 NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110
Query: 116 PDRDVASWNAMIVGFAQ--------------------------MGFLE-----KVLCLFY 144
P RDV SWNAMI G+A GFL+ + + +F
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170
Query: 145 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
M G++ D + + + ++ L +H + +G D DV + + YAKC
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSL 264
L + VF + + + +SW++II GC + D L ++ M G + S+
Sbjct: 231 RLDESFTVFYAMPQ--KNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASV 288
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
L SC L G +H+H + F D V + MY+KC ++ A+ LFD +
Sbjct: 289 LKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNL 348
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
S+ AMI+GY+QK + AL LF + + D +++ + C L G
Sbjct: 349 QSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGL 408
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A N+ V NA IDMY KC ++ +A +F + K VSW +IA N E +
Sbjct: 409 ATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKT 468
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCM 502
L++ M+ + P+ TF +VL+AC L G + T + ++ N Y S +
Sbjct: 469 LNILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHG---MEIHTTIVKLGMASNPYIGSSL 524
Query: 503 ADLLGRKGKLKEA 515
D+ + G + EA
Sbjct: 525 VDMYSKCGMIDEA 537
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 6/255 (2%)
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E+ +V +++ + C + + HMI GFRP V +S+C+ +
Sbjct: 43 EKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTV-----FVSNCLLQLYINC 97
Query: 277 GRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G L ++ + G L DV N +I Y+ D+ A F+ M R VSW +M+SG+
Sbjct: 98 GNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFL 157
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q G+ E++++F M +G D + ++ C +LG A G +V+
Sbjct: 158 QTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVV 217
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+AL+DMY+KC + ++ +FYA+P+K +SW+ +IAGC N L +F +M ++
Sbjct: 218 SGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVG 277
Query: 456 LRPNRVTFLAVLQAC 470
+ ++ + +VL++C
Sbjct: 278 VGVSQSIYASVLKSC 292
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/598 (35%), Positives = 317/598 (53%), Gaps = 41/598 (6%)
Query: 54 NLTFPFIA--KACAKLSDF--LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
L PF++ + C +S + SQM+ +++ F S + + + D C
Sbjct: 4 QLINPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDY--CTN 61
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHA 168
LF+ + + SWN I GF + + L+ ++ G + D T L +A
Sbjct: 62 ILFNTR-NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARL 120
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ + + +H+G D+D+ V N I C DL A +F + +R +VSWNS
Sbjct: 121 SLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFD--KSCVRDLVSWNS 178
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+I G ++LNFYR M +G +PD T++ ++SSC E L GR H + G
Sbjct: 179 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 238
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD------- 341
L V + N L+ MY KCG+++SAR LFD M ++T VSWT M+ GYAQ G LD
Sbjct: 239 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFD 298
Query: 342 ------------------------EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
EAL LF M+A PD VT++S +S C Q GAL++
Sbjct: 299 EMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDV 358
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G W +Y L NV + ALIDMY+KCG I A ++F LP + ++WT +I+G AL
Sbjct: 359 GIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLAL 418
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G A+ F +M++ + P+ VTFL +L AC H G +E+G YF+ M+ + ++P+L
Sbjct: 419 HGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLK 478
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HYSCM DLLGR G L+EA + ++SMPI++DA +WG L AC+IH N+ +GE A +L ++
Sbjct: 479 HYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQM 538
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+PH + YV +AN+Y W R +M++ V+K PG S + +NG F V D
Sbjct: 539 DPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRD 596
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 233/473 (49%), Gaps = 32/473 (6%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYS 73
R+ WN IR +D +A++L++R+ + D +P+N T+P + KACA+LS
Sbjct: 67 RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 126
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
I GH++ F SDIFV ++ + C LD A K+FDK RD+ SWN+MI G+ +
Sbjct: 127 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 186
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G+ + L + M++ GI+ D VT++G+ + + L L + H + G+ V +
Sbjct: 187 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 246
Query: 194 NTWISAYAKCNDLKMAELVFRGI----------------EEGL-------------RTVV 224
N + Y KC +L+ A +F + + GL + VV
Sbjct: 247 NALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVV 306
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
WN++IGG + ++ ++L + M PD T+VS LS+C AL G +H +
Sbjct: 307 PWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYI 366
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ L+V++ LI MY+KCG I A +F + R ++WTA+ISG A G+ A+
Sbjct: 367 EKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAI 426
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDM 403
F M +PD VT L ++S C G +E G K+F + L + + ++D+
Sbjct: 427 AYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDL 486
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G + +A EL ++P E V W + C ++G + +++++D
Sbjct: 487 LGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMD 539
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 322/587 (54%), Gaps = 7/587 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY---SQMIHG 78
WN IR AL +FR M++ + P+N T + A A + + IH
Sbjct: 86 WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + F SD+FV + +V+ Y ++ A K+F++M +RDV SW +MI AQ G +K
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
VL + M+ GI + VT++ L A + + + V++ G++ADV + N IS
Sbjct: 206 VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALIS 265
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC L A F+ + R SWN++I G + ++L + M+ G PD
Sbjct: 266 MYTKCGCLSDALEAFQAMPA--RYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDG 323
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+VS+LS+C L +G VHS+ G D + N+LI+MY+KCGD+ +A +F
Sbjct: 324 ITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQT 383
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + VSWT M+ GY + A LF M+ A V + ++S++S C Q GAL+ G
Sbjct: 384 MTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG 443
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ +Y + ++ + +AL+DMY+KCG I A E+F + K +SW MI G A N
Sbjct: 444 REIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASN 503
Query: 439 GEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G EA++LF QM+EL D +P+ +T AVL AC H G +++G YF LM+ + V P+
Sbjct: 504 GYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTE 562
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY C+ DLLGR G L EA F++ MPI+ + IWG+LL AC++H +++G+ + + +
Sbjct: 563 HYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNV 622
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
P+ +V ++N++A +WD V ++R +M ++K PG S V +
Sbjct: 623 APNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 230/457 (50%), Gaps = 9/457 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAK-CDRLDCAY--KLFDKMPDRDVASWNAMIVGFAQ 132
+HG +V++ SD FV ++ + A R D Y K+FD M + WN MI G++
Sbjct: 36 LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL---SLLKSVHSFGIHIGVDAD 189
L +F MR G+ D T+ + A+ L S ++H+ IG +D
Sbjct: 96 CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + ++ Y ++ A VF + E R VVSW S+I C +D L M
Sbjct: 156 VFVMSGLVNYYGAFRSVEEASKVFEEMYE--RDVVSWTSMISACAQCGHWDKVLKMLSEM 213
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G P+ T++SLLS+C +A+ +GR V++ +G + DV + N LISMY+KCG +
Sbjct: 214 QAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCL 273
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A F M R SW +I G+ Q + EALR+F M G PD +T++S++S C
Sbjct: 274 SDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSAC 333
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q G L G +Y G+ + ++ N+LI+MY+KCG + A +F + +K VVSWT
Sbjct: 334 AQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWT 393
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
M+ G +F A +LF +M ++ + + +++L AC+ G L+KG + + ++
Sbjct: 394 VMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEM 453
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
V +L S + D+ + G + A + + M K
Sbjct: 454 -NVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQ 489
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 325/598 (54%), Gaps = 8/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + + + +A+ F M + PN F + +AC+ + ++I+G +V
Sbjct: 114 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 173
Query: 82 KSPFW-SDIFVQTTMVDMYAK-CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K+ + +D+ V ++DM+ K L AYK+FDKMP+R++ +W MI FAQ+G
Sbjct: 174 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 233
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF +M L G D T + A L+L K +HS I +G+ DV V + +
Sbjct: 234 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 293
Query: 200 YAKC---NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFR 255
YAKC + + VF + E V+SW +II + D +++ + MI R
Sbjct: 294 YAKCAADGSVDDSRKVFEQMPE--HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 351
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ + S+L +C G V+S+ + G V N+LISMY++ G ++ AR
Sbjct: 352 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 411
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + ++ VS+ A++ GYA+ +EA LF + G T S++SG GA+
Sbjct: 412 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 471
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ GG K N +CNALI MYS+CG+I A ++F + ++ V+SWT+MI G
Sbjct: 472 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 531
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G AL++FH+M+E +PN +T++AVL AC+H G + +G +FN M K + + P
Sbjct: 532 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 591
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HY+CM DLLGR G L EA++F+ SMP+ +DA +W TLL AC++H N E+G + A +
Sbjct: 592 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 651
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
E EP A Y+ ++N++A G+W V +R MK + K G S + + + F V
Sbjct: 652 EQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHV 709
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 232/464 (50%), Gaps = 10/464 (2%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N IR+ +D H A M + + P+ T+ + K+C + +F +++H +++
Sbjct: 14 NRLIRQ-LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQ 72
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKVLC 141
S D V T++ +Y+KC + A +F+ M + RD+ SW+AM+ FA + +
Sbjct: 73 SGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIW 132
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAY 200
F +M +G + + +A +A + + + ++ F + G ++ADV V I +
Sbjct: 133 TFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMF 192
Query: 201 AK-CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
K DL A VF + E R +V+W +I D+++ + M G+ PD
Sbjct: 193 VKGSGDLGSAYKVFDKMPE--RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 250
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---GDIDSARFLF 316
T S+LS+C L G+ +HS I G LDV V +L+ MY+KC G +D +R +F
Sbjct: 251 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 310
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ M + +SWTA+I+ Y Q G+ D EA+ LF M + P+ + S++ CG
Sbjct: 311 EQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 370
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ +YA G+ V N+LI MY++ G + DAR+ F L EK +VS+ ++ G
Sbjct: 371 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 430
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A N + EA LF+++ + + + TF ++L G + KG
Sbjct: 431 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 474
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 36/256 (14%)
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G L A M PDL T ++ C + +LGK GL+ + +V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 398 NALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N LI +YSKCG AR +F + K +VSW+ M++ A N +A+ F M+EL
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 457 RPNRVTFLAVLQACTHA----------------GFLE--------------KGWGYFNLM 486
PN F AV++AC++A G+LE KG G
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 487 TKVYQVNPELN--HYSCMADLLGRKGKLKEALDFVQSMPIKS---DAGIWGTLLCACKIH 541
KV+ PE N ++ M + G ++A+D M + D + ++L AC
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262
Query: 542 RNIEIGEYVAYRLFEL 557
+ +G+ + R+ L
Sbjct: 263 GLLALGKQLHSRVIRL 278
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 325/598 (54%), Gaps = 8/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + + + +A+ F M + PN F + +AC+ + ++I+G +V
Sbjct: 96 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 155
Query: 82 KSPFW-SDIFVQTTMVDMYAK-CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K+ + +D+ V ++DM+ K L AYK+FDKMP+R++ +W MI FAQ+G
Sbjct: 156 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 215
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF +M L G D T + A L+L K +HS I +G+ DV V + +
Sbjct: 216 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 275
Query: 200 YAKC---NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFR 255
YAKC + + VF + E V+SW +II + D +++ + MI R
Sbjct: 276 YAKCAADGSVDDSRKVFEQMPE--HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 333
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ + S+L +C G V+S+ + G V N+LISMY++ G ++ AR
Sbjct: 334 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 393
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + ++ VS+ A++ GYA+ +EA LF + G T S++SG GA+
Sbjct: 394 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 453
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ GG K N +CNALI MYS+CG+I A ++F + ++ V+SWT+MI G
Sbjct: 454 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 513
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G AL++FH+M+E +PN +T++AVL AC+H G + +G +FN M K + + P
Sbjct: 514 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 573
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HY+CM DLLGR G L EA++F+ SMP+ +DA +W TLL AC++H N E+G + A +
Sbjct: 574 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 633
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
E EP A Y+ ++N++A G+W V +R MK + K G S + + + F V
Sbjct: 634 EQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHV 691
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 228/457 (49%), Gaps = 9/457 (1%)
Query: 30 VDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI 89
+D H A M + + P+ T+ + K+C + +F +++H +++S D
Sbjct: 2 LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 61
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKVLCLFYNMRL 148
V T++ +Y+KC + A +F+ M + RD+ SW+AM+ FA + + F +M
Sbjct: 62 VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 121
Query: 149 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAYAK-CNDL 206
+G + + +A +A + + + ++ F + G ++ADV V I + K DL
Sbjct: 122 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 181
Query: 207 KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLS 266
A VF + E R +V+W +I D+++ + M G+ PD T S+LS
Sbjct: 182 GSAYKVFDKMPE--RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 239
Query: 267 SCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---GDIDSARFLFDGMCDRT 323
+C L G+ +HS I G LDV V +L+ MY+KC G +D +R +F+ M +
Sbjct: 240 ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 299
Query: 324 RVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
+SWTA+I+ Y Q G+ D EA+ LF M + P+ + S++ CG G+
Sbjct: 300 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 359
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+YA G+ V N+LI MY++ G + DAR+ F L EK +VS+ ++ G A N +
Sbjct: 360 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 419
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EA LF+++ + + + TF ++L G + KG
Sbjct: 420 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 456
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 36/256 (14%)
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G L A M PDL T ++ C + +LGK GL+ + +V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 398 NALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N LI +YSKCG AR +F + K +VSW+ M++ A N +A+ F M+EL
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 457 RPNRVTFLAVLQACTHA----------------GFLE--------------KGWGYFNLM 486
PN F AV++AC++A G+LE KG G
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 487 TKVYQVNPELN--HYSCMADLLGRKGKLKEALDFVQSMPIKS---DAGIWGTLLCACKIH 541
KV+ PE N ++ M + G ++A+D M + D + ++L AC
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244
Query: 542 RNIEIGEYVAYRLFEL 557
+ +G+ + R+ L
Sbjct: 245 GLLALGKQLHSRVIRL 260
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/596 (33%), Positives = 321/596 (53%), Gaps = 33/596 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ V + +A+ LF M + I+PN + + AC L D ++IHG+++
Sbjct: 226 WNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI 285
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + D F +VDMYAK L A +F+K+ D+ SWNA+I G E+ L
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M+ + +HS + + +++D+ V + Y+
Sbjct: 346 LLGQMK---------------------------RQLHSSLMKMDMESDLFVSVGLVDMYS 378
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD--SLNFYRHMIYDGFRPDVT 259
KC+ L+ A + F + E + +++WN+II G Y ++D +L+ + M +G + T
Sbjct: 379 KCDLLEDARMAFNLLPE--KDLIAWNAIISG--YSQYWEDMEALSLFVEMHKEGIGFNQT 434
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ ++L S + + R VH + GF D+ V+N+LI Y KC ++ A +F+
Sbjct: 435 TLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 494
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
VS+T+MI+ YAQ G +EAL+LF M+ PD S+++ C A E GK
Sbjct: 495 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGK 554
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ G ++ N+L++MY+KCGSI DA F L E+ +VSW+ MI G A +G
Sbjct: 555 QLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHG 614
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+AL LF+QM++ + PN +T ++VL AC HAG + + YF M +++ P HY
Sbjct: 615 HGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHY 674
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLLGR GK+ EA++ V MP +++A +WG LL A +IH+++E+G A LF LEP
Sbjct: 675 ACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEP 734
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +V +ANIYA G+W+ VA +R +M+ ++VKK PG S + + K TF V D
Sbjct: 735 EKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGD 790
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 222/458 (48%), Gaps = 29/458 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I AL+ F M ++ N TF + KAC+ + D + +HG +V
Sbjct: 125 WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVV 184
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F D+FV T+V MYAKCD + +LFD++P+R+V SWNA+ + Q F + +
Sbjct: 185 VSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVG 244
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LFY M L GI+ + ++ + A + S K +H + I +G D D N + YA
Sbjct: 245 LFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA 304
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K DL A VF I++ +VSWN++I GC + + +L M
Sbjct: 305 KVGDLADAISVFEKIKQ--PDIVSWNAVIAGCVLHEHHEQALELLGQM------------ 350
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
R +HS + + D+ V L+ MYSKC ++ AR F+ + +
Sbjct: 351 ---------------KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE 395
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ ++W A+ISGY+Q + EAL LF M G + T+ +++ + + +
Sbjct: 396 KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 455
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G ++ V N+LID Y KC + DA +F +VS+T+MI A G+
Sbjct: 456 HGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQG 515
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EAL LF +M +++L+P+R ++L AC + E+G
Sbjct: 516 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG 553
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 243/542 (44%), Gaps = 68/542 (12%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
+E + + + K + P ++++ + C IH HI KS D ++
Sbjct: 35 SEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIR 94
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
++++Y+KC A KL D+ + D+ SW+A+I G+AQ G L F+ M L+G++
Sbjct: 95 NHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ T + +A K L + K VH + G + DV V NT + YAKC++ ++ +
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F I E R VVSWN++ D +++ + M+ G +P+ ++ S++++C
Sbjct: 215 FDEIPE--RNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLR 272
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+G+++H + I G+D D N L+ MY+K GD+ A +F+ + VSW A+I+
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIA 332
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G ++AL L M+ + + ++
Sbjct: 333 GCVLHEHHEQALELLGQMK---------------------------RQLHSSLMKMDMES 365
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
++ V L+DMYSKC + DAR F LPEK +++W +I+G + E +EAL LF +M
Sbjct: 366 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 425
Query: 453 ELDLRPNRVTF---------LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY---- 499
+ + N+ T L V+ C L G+ + +Y VN ++ Y
Sbjct: 426 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFH---SDIYVVNSLIDSYGKCS 482
Query: 500 --------------------SCMADLLGRKGKLKEALDF---VQSMPIKSDAGIWGTLLC 536
+ M + G+ +EAL +Q M +K D + +LL
Sbjct: 483 HVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLN 542
Query: 537 AC 538
AC
Sbjct: 543 AC 544
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 143/294 (48%), Gaps = 6/294 (2%)
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F P + LLS C ++L G +H+H G D S+ N LI++YSKC AR
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYAR 111
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
L D + VSW+A+ISGYAQ G AL F M G + T S++ C
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L +GK G + +V V N L+ MY+KC D++ LF +PE+ VVSW + +
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231
Query: 434 GCALNGEFV-EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQ 491
C + +F EA+ LF++M+ ++PN + +++ ACT +G + K+ Y
Sbjct: 232 -CYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+P + + D+ + G L +A+ + + + D W ++ C +H + E
Sbjct: 291 WDP--FSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHE 341
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 11 NKIYRSSTIN---QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
+I+ TI + S I + +AL LF M+ +++P+ + ACA L
Sbjct: 488 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 547
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
S F + +H HI+K F DIF ++V+MYAKC +D A + F ++ +R + SW+AMI
Sbjct: 548 SAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMI 607
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G AQ G + L LF M G+ + +T++ + A HA
Sbjct: 608 GGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 648
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 326/600 (54%), Gaps = 10/600 (1%)
Query: 22 WNSQIREAVDKNEAHK----ALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
WNS I A +N + A+ LFRRM + N++ PN T + A + LSD + +
Sbjct: 82 WNSLIN-AFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H VK+ D++V +++++MY K + A KLFD+MP+R+ SW MI G+A
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 137 EKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+K + +F MR IQ +F + + A + + VHS I G+ A VSV N
Sbjct: 201 DKAVEVFELMRREEEIQNEF-ALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANA 259
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAKC L A F G + ++W++++ G G D +L + M G
Sbjct: 260 LVTMYAKCGSLDDAVRTFEF--SGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P T+V ++++C A+V+G+ +HS GF L + V++ ++ MY+KCG + AR
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + V WT++I+GY Q GD + L L+ M+ +P+ +T+ S++ C AL
Sbjct: 378 FECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAAL 437
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ GK G K V + +AL MY+KCGS+ D +F+ +P + V+SW MI+G
Sbjct: 438 DQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGL 497
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ NG +AL+LF +M+ ++P+ VTF+ +L AC+H G +++GW YF +M + + P
Sbjct: 498 SQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPM 557
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HY+CM D+L R GKL EA +F++S + +W LL ACK HRN E+G Y +L
Sbjct: 558 VEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLV 617
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EL ++ YV +++IY G + V +R +MK V K PG S + + G F V D
Sbjct: 618 ELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGD 677
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 243/478 (50%), Gaps = 10/478 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM--PDRDVA 121
C + L + +H I+K+ S I+V T +++YAK + L A LFD + D+D
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 122 SWNAMIVGFAQMGFLEK---VLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
SWN++I F+Q + LF MR + + T+ G+ AA + + K
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
HS + G DV V ++ ++ Y K + A +F + E R VSW ++I G D
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPE--RNTVSWATMISGYASSD 198
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
D ++ + M + + + S+LS+ + GR VHS I G VSV N
Sbjct: 199 IADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVAN 258
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L++MY+KCG +D A F+ D+ ++W+AM++GYAQ GD D+AL+LF M ++G +P
Sbjct: 259 ALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLP 318
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
T++ +I+ C A+ GK ++A G + V +A++DMY+KCGS+ DAR+ F
Sbjct: 319 SEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGF 378
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ + VV WT++I G NG++ L+L+ +M + PN +T +VL+AC+ L+
Sbjct: 379 ECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALD 438
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+G + K Y E+ S ++ + + G L + MP + D W ++
Sbjct: 439 QGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR-DVISWNAMI 494
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 6/241 (2%)
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F P ++ L C + +++GR +H+ + G + V NT +++Y+K + A
Sbjct: 7 FPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHAL 66
Query: 314 FLFDGMCDRTR--VSWTAMISGYAQKGDLDE---ALRLFFAMEAAGEV-PDLVTVLSMIS 367
LFD + D + VSW ++I+ ++Q A+ LF M A V P+ T+ + S
Sbjct: 67 TLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFS 126
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
+ GK + A G +V V ++L++MY K G + DAR+LF +PE+ VS
Sbjct: 127 AASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVS 186
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W TMI+G A + +A+++F M + N +VL A T F+ G +L
Sbjct: 187 WATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAI 246
Query: 488 K 488
K
Sbjct: 247 K 247
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/585 (34%), Positives = 329/585 (56%), Gaps = 12/585 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V K+++ A F+ M+K + NN T + AC + + +H I
Sbjct: 317 WTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIF 376
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKVL 140
K+ F+ D V + +++MY+K +D + ++F +M +++A W MI FAQ G + +
Sbjct: 377 KTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAV 436
Query: 141 CLFYNMRLVGIQADFV---TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
LF M G++ D +V+ + + LSL + +H + + IG+ D+SV ++
Sbjct: 437 ELFQRMLQEGLRPDKFCSSSVLSIIDS------LSLGRLIHCYILKIGLFTDISVGSSLF 490
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y+KC L+ + VF + + + VSW S+I G + D + ++ +R M+ + RPD
Sbjct: 491 TMYSKCGSLEESYTVFEQMPD--KDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPD 548
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ + L++C +L +G+ VH + + +V V L++MYSKCG I AR +FD
Sbjct: 549 QMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFD 608
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + + S ++++SGYAQ G +++AL LF + A D TV S+I +L++
Sbjct: 609 MLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDI 668
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G GL V V ++L+ MYSKCGSI + ++F + + ++SWT MI A
Sbjct: 669 GTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQ 728
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G+ EAL ++ M + +P+ VTF+ VL AC+H G +E+G+ + N M K Y + P
Sbjct: 729 HGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYY 788
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+CM DLLGR G+LKEA F+ +MPI+ DA +WG LL ACK+H +IE+G A R+ EL
Sbjct: 789 HYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIEL 848
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
EP A YV ++NI A G W+ V +R++M+ VKK PG S V
Sbjct: 849 EPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWSSV 893
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 264/520 (50%), Gaps = 6/520 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I AV E AL LF +M PN+ TF I ACA L + + + + G ++
Sbjct: 216 WNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVI 275
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+FV T ++D+YAKC +D A K F +MP R+V SW +I GF Q
Sbjct: 276 KCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFH 335
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F MR VG + + T+ + A + +HS+ G D +V + I+ Y+
Sbjct: 336 FFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYS 395
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + ++E VFR + E + + W +I ++ ++ M+ +G RPD
Sbjct: 396 KIGVVDLSERVFREM-ESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCS 454
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS ++L GRL+H + + G D+SV ++L +MYSKCG ++ + +F+ M D
Sbjct: 455 SSVLS---IIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPD 511
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW +MI+G+++ ++A++LF M PD +T+ + ++ C +LE GK
Sbjct: 512 KDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEV 571
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
YA + V+V AL++MYSKCG+I AR +F LP+K S +++++G A NG
Sbjct: 572 HGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYI 631
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL LFH++ DL + T +V+ A L+ G +TK+ +N E++ S
Sbjct: 632 EDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKM-GLNAEVSVGSS 690
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + + G + E + + K D W ++ + H
Sbjct: 691 LVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMIVSYAQH 729
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 222/442 (50%), Gaps = 12/442 (2%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
F +M+ + +PN T+ + AC L LY ++++ +K+ F+S+ +V+ M+D++AK
Sbjct: 135 FCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAK 194
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
+ A ++F + +V WNA+I G + L LF M + T +
Sbjct: 195 LCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSI 254
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A + L + V + I G DV V I YAKC D+ A F + +R
Sbjct: 255 LTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEF--LRMPIR 312
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSW +II G D + +F++ M G + + T+ S+L++C P + + +H
Sbjct: 313 NVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLH 372
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGYAQKGDL 340
S GF LD +V + LI+MYSK G +D + +F M + W MIS +AQ G
Sbjct: 373 SWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGST 432
Query: 341 DEALRLFFAMEAAGEVPDLV---TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
A+ LF M G PD +VLS+I +L LG+ Y GL ++ V
Sbjct: 433 GRAVELFQRMLQEGLRPDKFCSSSVLSIID------SLSLGRLIHCYILKIGLFTDISVG 486
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
++L MYSKCGS+ ++ +F +P+K VSW +MI G + + +A+ LF +M+ ++R
Sbjct: 487 SSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIR 546
Query: 458 PNRVTFLAVLQACTHAGFLEKG 479
P+++T A L AC+ LEKG
Sbjct: 547 PDQMTLTAALTACSALHSLEKG 568
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 215/478 (44%), Gaps = 15/478 (3%)
Query: 73 SQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
++++H H +K+ S+ F+ +++ Y K + + A +LFDK P +V SWN +I G
Sbjct: 64 TKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCN 123
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q E F MR G + T + A + V+S + G ++
Sbjct: 124 QNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGY 183
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V I +AK + A VF+ + VV WN+II G + +L+ + M
Sbjct: 184 VRAGMIDLFAKLCSFEDALRVFQDVL--CENVVCWNAIISGAVKNRENWVALDLFCQMCC 241
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
F P+ T S+L++C E L GR V I G DV V +I +Y+KC D+D
Sbjct: 242 RFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQ 301
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A F M R VSWT +ISG+ QK D A F M GE + T+ S+++ C +
Sbjct: 302 AVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTE 361
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTT 430
++ ++ G + V +ALI+MYSK G + + +F + K + W
Sbjct: 362 PVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAV 421
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRV---TFLAVLQACTHAGFLEKGWGYFNLMT 487
MI+ A +G A++LF +M++ LRP++ + L+++ + + + L T
Sbjct: 422 MISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKIGLFT 481
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ + YS + G L+E+ + MP K + W +++ H + E
Sbjct: 482 DISVGSSLFTMYS-------KCGSLEESYTVFEQMPDKDNVS-WASMITGFSEHDHAE 531
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 321/587 (54%), Gaps = 7/587 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY---SQMIHG 78
WN IR AL +FR M++ + P+N T + A A + + IH
Sbjct: 86 WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + F SD+FV + +V+ Y + A K+F++M +RDV SW +MI AQ G +K
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
VL + M+ GI + VT++ L A + + + V++ G++ADV + N IS
Sbjct: 206 VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALIS 265
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC L A F+ + R SWN++I G + ++L + M+ G PD
Sbjct: 266 MYTKCGCLSDALEAFQAMPA--RYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDG 323
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+VS+LS+C L +G VHS+ G D + N+LI+MY+KCGD+ +A +F
Sbjct: 324 ITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQT 383
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + VSWT M+ GY + A LF M+ A V + ++S++S C Q GAL+ G
Sbjct: 384 MTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG 443
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ +Y + ++ + +AL+DMY+KCG I A E+F + K +SW MI G A N
Sbjct: 444 REIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASN 503
Query: 439 GEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G EA++LF QM+EL D +P+ +T AVL AC H G +++G YF LM+ + V P+
Sbjct: 504 GYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTE 562
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY C+ DLLGR G L EA F++ MPI+ + IWG+LL AC++H +++G+ + + +
Sbjct: 563 HYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNV 622
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
P+ +V ++N++A +WD V ++R +M ++K PG S V +
Sbjct: 623 APNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 230/457 (50%), Gaps = 9/457 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAK-CDRLDCAY--KLFDKMPDRDVASWNAMIVGFAQ 132
+HG +V++ SD FV ++ + A R D Y K+FD M + WN MI G++
Sbjct: 36 LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL---SLLKSVHSFGIHIGVDAD 189
L +F MR G+ D T+ + A+ L S ++H+ IG +D
Sbjct: 96 CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + ++ Y +K A VF + E R VVSW S+I C +D L M
Sbjct: 156 VFVMSGLVNYYGAFRSVKEASKVFEEMYE--RDVVSWTSMISACAQCGHWDKVLKMLSEM 213
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G P+ T++SLLS+C +A+ +GR V++ +G + DV + N LISMY+KCG +
Sbjct: 214 QAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCL 273
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A F M R SW +I G+ Q + EALR+F M G PD +T++S++S C
Sbjct: 274 SDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSAC 333
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q G L G +Y G+ + ++ N+LI+MY+KCG + A +F + +K VVSWT
Sbjct: 334 AQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWT 393
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
M+ G +F A +LF +M ++ + + +++L AC+ G L+KG + + ++
Sbjct: 394 VMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEM 453
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
V +L S + D+ + G + A + + M K
Sbjct: 454 -NVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQ 489
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 304/559 (54%), Gaps = 7/559 (1%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMP 116
I + C D Q +H H++K+ D + +++ A D +D A +F+ +
Sbjct: 26 LILQQCKTPKDL---QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHID 82
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+ +++N MI G A + L LF M +Q D T + +A K L +
Sbjct: 83 KPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQ 142
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH+ + G ++ V NT I YA C + +A VF G+ E R++V+WNS++ G T
Sbjct: 143 VHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPE--RSIVAWNSMLSGYTKN 200
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+D+ + +R ++ D T++S+L +C L G L+ + + G + ++
Sbjct: 201 GLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLT 260
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+LI MY+KCG +D+AR LFD M R V+W+AMISGYAQ EAL LF M+
Sbjct: 261 TSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVY 320
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+ VT++S++ C GA E GKW Y +K V + LID Y+KCG I + E+
Sbjct: 321 PNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEV 380
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F + K V +WT +I G A NGE AL+ F M+E D++PN VTF+ VL AC+HA +
Sbjct: 381 FKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLV 440
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
++G FN M + + + P + HY CM D+LGR G L+EA F+ +MP +A +W TLL
Sbjct: 441 DQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLA 500
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
+C+ H+NIE+ E + LEP + Y+ ++N YAL GR + +R+++K ++KK
Sbjct: 501 SCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKI 560
Query: 597 PGQSLVHINGKTCTFTVED 615
PG SL+ ++G F ED
Sbjct: 561 PGCSLIELDGVVHEFFSED 579
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 215/416 (51%), Gaps = 4/416 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N IR K ALLLF++M + ++ + TF + KAC+++ + +H I+
Sbjct: 89 YNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALIL 148
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F S+ FV+ T++ MYA C ++ A +FD MP+R + +WN+M+ G+ + G ++V+
Sbjct: 149 KSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVK 208
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF + + I+ D VT++ + A +L + + + + + G+ + ++ + I YA
Sbjct: 209 LFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYA 268
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F +++ R VV+W+++I G D+ ++LN + M P+ T+
Sbjct: 269 KCGQVDTARKLFDEMDK--RDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS+L SC A G+ VH + L V++ LI Y+KCG ID + +F M
Sbjct: 327 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSF 386
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-W 380
+ +WTA+I G A G+ AL F +M P+ VT + ++S C + ++ G+
Sbjct: 387 KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
F++ ++ + ++D+ + G + +A + +P V W T++A C
Sbjct: 447 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASC 502
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 149/303 (49%), Gaps = 3/303 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+I WNS + + + LFR++ + IE +++T + AC +L++ ++I
Sbjct: 186 SIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIG 245
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+IV + + T+++DMYAKC ++D A KLFD+M RDV +W+AMI G+AQ +
Sbjct: 246 EYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCK 305
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF+ M+ + + VT++ + + K VH + + V++ I
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLI 365
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + + VF+ E + V +W ++I G + +L F+ M+ + +P+
Sbjct: 366 DFYAKCGYIDRSVEVFK--EMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPN 423
Query: 258 VTTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T + +LS+C + QGR L +S + + + ++ + + G ++ A
Sbjct: 424 DVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFI 483
Query: 317 DGM 319
D M
Sbjct: 484 DNM 486
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 200/598 (33%), Positives = 327/598 (54%), Gaps = 7/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS + ++ ++ LF+ + D + P+ T + CA+ + + HG
Sbjct: 265 WNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGL 324
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+K ++ V ++++DMY+KC L A LFD +++V SWN+MI G+++
Sbjct: 325 ALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGA 383
Query: 140 LCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 197
L M++ ++ + VT++ + LK +H + + G + +D V N ++
Sbjct: 384 FELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFV 443
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ YAKC L AE VF G+E + V SWN++IGG +L+ Y M G PD
Sbjct: 444 AGYAKCGSLHYAEGVFCGMES--KMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPD 501
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ T+ SLLS+C ++L G+ +H + GF+LD + +L+S+Y +CG I A+ FD
Sbjct: 502 LFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFD 561
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M ++ V W MI+G++Q +AL +F M ++ PD ++++ + C Q AL L
Sbjct: 562 NMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRL 621
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK +A L ++ V +LIDMY+KCG + ++ +F + K V+W +I G +
Sbjct: 622 GKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGI 681
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G +A++LF M RP+ VTF+A+L AC HAG + +G Y M ++ + P+L
Sbjct: 682 HGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLE 741
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ D+LGR G+L EAL+ V +P K D+ IW +LL +C+ +R+++IGE VA +L EL
Sbjct: 742 HYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLEL 801
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P A YV ++N YA G+WD V +R MK ++K G S + I GK F V D
Sbjct: 802 GPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGD 859
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 260/533 (48%), Gaps = 12/533 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYS 73
R + WN+ + + + A+ +F M + P+N T P + KAC + D
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +HG +K+ SD+FV ++ MY K ++ A K+FDKMP R++ SWN+++ +
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275
Query: 134 GFLEKVLCLFYNMRL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G E+ LF + G+ D T++ + + L H + +G+ ++
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELK 335
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-I 250
V ++ + Y+KC L A ++F E + V+SWNS+IGG + F + R M +
Sbjct: 336 VNSSLLDMYSKCGYLCEARVLFDTNE---KNVISWNSMIGGYSKDRDFRGAFELLRKMQM 392
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDI 309
D + + T++++L C ++ + +H + + +GF D V N ++ Y+KCG +
Sbjct: 393 EDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSL 452
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A +F GM + SW A+I G+ Q G +AL L+ M +G PDL T+ S++S C
Sbjct: 453 HYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSAC 512
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ +L GK G + + +C +L+ +Y +CG I A+ F + EK +V W
Sbjct: 513 ARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWN 572
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
TMI G + N +ALD+FHQM+ + P+ ++ + L AC+ L G K
Sbjct: 573 TMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKS 632
Query: 490 YQVNPELNHYSC-MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ E + +C + D+ + G ++++ + + +K + W L+ IH
Sbjct: 633 HLT--EHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEV-TWNVLITGYGIH 682
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 243/507 (47%), Gaps = 20/507 (3%)
Query: 42 FRRMKKNDIEPNNLTFP-----FIAKACAKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTM 95
F + ND+ ++ + P + + C + + + IH I SP F +D+ + T +
Sbjct: 76 FLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRL 135
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQAD 154
V MY+ CD + +F+ +++ WNA++ G+ + + +F M L D
Sbjct: 136 VTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPD 195
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T+ + +A + + L ++VH F + V +DV V N I+ Y K ++ A VF
Sbjct: 196 NFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFD 255
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY--DGFRPDVTTVVSLLSSCVCPE 272
+ + R +VSWNS++ C F++S ++ ++ +G PDV T+V+++ C
Sbjct: 256 KMPQ--RNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQG 313
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+ G + H + G ++ V ++L+ MYSKCG + AR LFD ++ +SW +MI
Sbjct: 314 EVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIG 372
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGG-L 390
GY++ D A L M+ +V + VT+L+++ C + K YA G +
Sbjct: 373 GYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFI 432
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ + +V NA + Y+KCGS+ A +F + K V SW +I G NG +ALDL+
Sbjct: 433 QSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLL 492
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA--DLLGR 508
M L P+ T ++L AC L G M + EL+ + C++ L +
Sbjct: 493 MRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLR---NGFELDEFICISLVSLYVQ 549
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLL 535
GK+ A F +M K + W T++
Sbjct: 550 CGKILLAKLFFDNMEEK-NLVCWNTMI 575
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 173/369 (46%), Gaps = 12/369 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
S ++ WN+ I V KAL L+ M+ + +EP+ T + ACA+L +
Sbjct: 463 ESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGK 522
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG ++++ F D F+ ++V +Y +C ++ A FD M ++++ WN MI GF+Q
Sbjct: 523 EIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNE 582
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
F L +F+ M I D ++++G A L L K +H F + + V
Sbjct: 583 FPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTC 642
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I YAKC ++ ++ +F + L+ V+WN +I G ++ ++ M GF
Sbjct: 643 SLIDMYAKCGCMEQSQNIFDRVH--LKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGF 700
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
RPD T ++LL++C + +G + +G + ++ M + G ++ A
Sbjct: 701 RPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEAL 760
Query: 314 FLFDGMCDR--TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
L + + D+ +R+ W++++S DLD ++ + G PD +IS
Sbjct: 761 ELVNELPDKPDSRI-WSSLLSSCRNYRDLDIGEKVANKLLELG--PDKAENYVLIS---- 813
Query: 372 SGALELGKW 380
+ LGKW
Sbjct: 814 NFYARLGKW 822
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 118/266 (44%), Gaps = 14/266 (5%)
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S H+ +L + IN I +S S F + + + + G+L+
Sbjct: 12 SFSFHHHHNLTLQNINNKIPFHSFTPPKSSHLFSPIISSHKKQQNASKHFHNLCNTGNLN 71
Query: 342 EALRLFFA-----MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY-ACSGGLKDNVM 395
+A + + ++ P + L ++ CG+ +E+G+ N+ + S +++V+
Sbjct: 72 QAFNFLQSNLNDVVSSSNSKPKQLIGL-LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVV 130
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL- 454
+ L+ MYS C S D+ +F A K + W +++G N F +A+ +F +M+ L
Sbjct: 131 LITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLT 190
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGY--FNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ P+ T V++AC + G F L TKV ++ + + + G+ G +
Sbjct: 191 EFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLS---DVFVGNALIAMYGKFGFV 247
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCAC 538
+ A+ MP ++ W +++ AC
Sbjct: 248 ESAVKVFDKMPQRNLVS-WNSVMYAC 272
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 309/574 (53%), Gaps = 32/574 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYA--KCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH I+K+ + F + +++ A L A LF+ + + WN MI G +
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ + M L G++ + T L ++ K +H + +G+++D
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168
Query: 192 VCNTWISAYAKCNDLKMAELVF----------------------------RGIEE-GLRT 222
V + I+ YA+ +L AELVF R EE +R
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VSWN++I G +F+++L F++ M P+ +T+V++LS+C +L G V S
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+G ++ ++N LI MYSKCGD+D AR LF+G+C++ +SW MI GY+ E
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK-DNVMVCNALI 401
AL LF M+ + P+ VT +S++ C GAL+LGKW Y L N + +LI
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLI 408
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY+KCG+I A+++F + K++ SW MI+G A++G AL+LF QM + P+ +
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TF+ VL AC+HAG +E G F+ M + Y ++P+L HY CM DLLGR G EA +++
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKN 528
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
M +K D IWG+LL AC++H N+E+GE+ A LFELEP + YV ++NIYA GRWD V
Sbjct: 529 MEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDV 588
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A +RT + +KK PG S + ++ F V D
Sbjct: 589 ARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGD 622
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 229/454 (50%), Gaps = 40/454 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR + A+ + RM +EPN+ TFPF+ K+CAK+ + IHGH++
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVL 159
Query: 82 KSPFWSDIFVQTTMVDMYAKCDR-------------------------------LDCAYK 110
K SD FV T++++MYA+ LD A +
Sbjct: 160 KLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARR 219
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LF+++P RD SWNAMI G+AQ G E+ L F M+ + + T++ + A +
Sbjct: 220 LFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGS 279
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L V S+ G+ +++ + N I Y+KC DL A +F GI E + ++SWN +I
Sbjct: 280 LELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE--KDIISWNVMI 337
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
GG ++ + + ++L +R M P+ T VS+L +C AL G+ +H++
Sbjct: 338 GGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLG 397
Query: 291 L-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
L + S+ +LI MY+KCG+I++A+ +F GM ++ SW AMISG A G + AL LF
Sbjct: 398 LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQ 457
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCG 408
M G PD +T + ++S C +G +ELG+ F + + + +ID+ + G
Sbjct: 458 MRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAG 517
Query: 409 SIGDARELFYAL---PEKTVVSWTTMIAGCALNG 439
+A L + P+ + W +++ C ++G
Sbjct: 518 LFDEAEALMKNMEMKPDGAI--WGSLLGACRVHG 549
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 201/406 (49%), Gaps = 36/406 (8%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWIS--AYAKCNDLKMAELVFRGIEEGLRTVVSW 226
K LK +HS I G+ + I A + +L A L+F IE+ + + W
Sbjct: 43 KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFI--W 100
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N++I G + +++FY M+ G P+ T LL SC A +G+ +H H +
Sbjct: 101 NTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLK 160
Query: 287 YGFDLDVSVINTLISMYSKCGDI-------------------------------DSARFL 315
G + D V +LI+MY++ G++ D AR L
Sbjct: 161 LGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRL 220
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + R VSW AMI+GYAQ G +EAL F M+ A P+ T+++++S C QSG+L
Sbjct: 221 FEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSL 280
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
ELG W ++ GL N+ + NALIDMYSKCG + AR+LF + EK ++SW MI G
Sbjct: 281 ELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGY 340
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ + EAL LF +M + ++ PN VTF+++L AC + G L+ G + K +
Sbjct: 341 SHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN 400
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ ++ + D+ + G ++ A M KS G W ++ +H
Sbjct: 401 TSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS-LGSWNAMISGLAMH 445
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN I N +AL LFR+M+++++EPN++TF I ACA L + IH
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 79 HIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I K ++ + T+++DMYAKC ++ A ++F M + + SWNAMI G A G
Sbjct: 390 YIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHAN 449
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV----C 193
L LF MR G + D +T +G+ A HA + L + S + D D+S
Sbjct: 450 MALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE---DYDISPKLQHY 506
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
I + AE + + +E + W S++G C
Sbjct: 507 GCMIDLLGRAGLFDEAEALMKNMEMKPDGAI-WGSLLGAC 545
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA-----KLSD 69
+ ++ WN+ I A+ AL LFR+M+ EP+++TF + AC+ +L
Sbjct: 428 KPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGR 487
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMI 127
+S M+ + + SP + M+D+ + D A L M + D A W +++
Sbjct: 488 QCFSSMVEDYDI-SP---KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 209/590 (35%), Positives = 309/590 (52%), Gaps = 64/590 (10%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
F T++ Y+K +D + FD++P RD SW MIVG+ +G K + + +M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
GI+ T+ + + + + K VHSF + +G+ +VSV N+ ++ YAKC D MA
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 210 ELVF-----RGI------------------------EEGLRTVVSWNSIIGGCTYGDKFD 240
+ VF R I + R +V+WNS+I G
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 241 DSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+L+ + M+ D PD T+ S+LS+C E L G+ +HSH + GFD+ V+N L
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 300 ISMYSKCGDIDSARFL---------------------------------FDGMCDRTRVS 326
ISMYS+CG +++AR L F + DR V+
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
WTAMI GY Q G EA+ LF +M G+ P+ T+ +M+S +L GK A
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEAL 445
G +V V NALI MY+K G+I A F + E+ VSWT+MI A +G EAL
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
+LF M+ LRP+ +T++ V ACTHAG + +G YF++M V ++ P L+HY+CM DL
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPY 565
GR G L+EA +F++ MPI+ D WG+LL AC++H+NI++G+ A RL LEP ++ Y
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+AN+Y+ G+W+ A +R MK +VKK G S + + K F VED
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVED 670
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 221/483 (45%), Gaps = 66/483 (13%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + HKA+ + M K IEP T + + A + +H IV
Sbjct: 114 WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV 173
Query: 82 KSPFWSDIFVQTTMVDMYAKC----------DRL---------------------DCAYK 110
K ++ V ++++MYAKC DR+ D A
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAK 169
F++M +RD+ +WN+MI GF Q G+ + L +F M R + D T+ + A + +
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--RGIE----EGL--- 220
L + K +HS + G D V N IS Y++C ++ A + RG + EG
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 221 ----------------------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
R VV+W ++I G + +++N +R M+ G RP+
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS 413
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ ++LS +L G+ +H + G VSV N LI+MY+K G+I SA FD
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDL 473
Query: 319 M-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ C+R VSWT+MI AQ G +EAL LF M G PD +T + + S C +G +
Sbjct: 474 IRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQ 533
Query: 378 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G+ +FD + + ++D++ + G + +A+E +P E VV+W ++++ C
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Query: 436 ALN 438
++
Sbjct: 594 RVH 596
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 66/265 (24%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
+LVH I G V ++N L+++YSK G AR LFD M RT SW ++S Y++
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 337 KGDLD-------------------------------EALRLFFAMEAAGEVPDLVTVLSM 365
+GD+D +A+R+ M G P T+ ++
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG----------------- 408
++ + +E GK ++ GL+ NV V N+L++MY+KCG
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 409 -----------SIGD---ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+G A F + E+ +V+W +MI+G G + ALD+F +M+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 455 D-LRPNRVTFLAVLQACTHAGFLEK 478
L P+R T +VL AC + LEK
Sbjct: 273 SLLSPDRFTLASVLSACAN---LEK 294
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ LFR M PN+ T + + L+ + + IHG VKS + V ++
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 97 DMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
MYAK + A + FD + +RD SW +MI+ AQ G E+ L LF M + G++ D
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
+T +G+ A HA ++ + F + VD + +S YA DL + +
Sbjct: 516 ITYVGVFSACTHAGLVN--QGRQYFDMMKDVDKIIPT----LSHYACMVDLFGRAGLLQE 569
Query: 216 IEEGLRT------VVSWNSIIGGCTYGDKFD 240
+E + VV+W S++ C D
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 205/597 (34%), Positives = 316/597 (52%), Gaps = 4/597 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W S I + AL LF M ++ P+ +ACA+L D + +H
Sbjct: 109 SWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQA 168
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS SD+ VQ +V MY+K + + LF +M ++D SW ++I GFAQ G + L
Sbjct: 169 MKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEAL 228
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+F M G+ G +A L + +HS + +D + +
Sbjct: 229 QIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDM 288
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YA+C L+ A+ VF GI+ +VSWNSII C+ +++ M G RPD
Sbjct: 289 YARCKKLESAKRVFYGIDA--PDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGI 346
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
TV LL +CV +A+ GRL+HS+ + G D DVSV N+L+SMY++C D SA +F
Sbjct: 347 TVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHET 406
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
DR V+W ++++ Q L+ +LF ++ + D +++ +++S + G E+ K
Sbjct: 407 RDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVK 466
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
GL ++ M+ N LID Y+KCGS+ DA +LF + + V SW+++I G A +
Sbjct: 467 QVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQS 526
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +ALDLF +M L +RPN VTF+ VL AC+ G +++G Y+++M + V P H
Sbjct: 527 GYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREH 586
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
SC+ DLL R G+L EA FV MP + D +W TLL K H ++E+G A + ++
Sbjct: 587 CSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNID 646
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P +A YV + NIY+ G W+ A L+ M+ + VKK PG+S V + G+ F VED
Sbjct: 647 PSHSAAYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKSWVKLKGELKVFIVED 703
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 220/476 (46%), Gaps = 7/476 (1%)
Query: 64 CAKLSDFLYSQMIHGHIVKSP---FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
C++L ++H H++ SP + + ++ MY +C + A +FD+MP ++
Sbjct: 48 CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SW ++I AQ L LF +M G D + +A + + + VH+
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ +D+ V N ++ Y+K + L+F + E + +SW SII G
Sbjct: 168 AMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMRE--KDPISWGSIIAGFAQQGCEM 225
Query: 241 DSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
++L +R M+ +G P+ S+ S+C +L G +HS + Y D + +L
Sbjct: 226 EALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSL 285
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
MY++C ++SA+ +F G+ VSW ++I+ + +G L EA+ L M +G PD
Sbjct: 286 SDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDG 345
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+TV ++ C A++ G+ +Y GL +V VCN+L+ MY++C A ++F+
Sbjct: 346 ITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHE 405
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
++ VV+W +++ C + LF+ + +R++ VL A G+ E
Sbjct: 406 TRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMV 465
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
KV VN + + + D + G L +A+ + M SD W +L+
Sbjct: 466 KQVHTCTFKVGLVNDTM-LSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLI 520
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 178/365 (48%), Gaps = 9/365 (2%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ Y +C + A LVF E + VSW S+I + D+L + M+ G
Sbjct: 80 NHLITMYGRCAAPESARLVFD--EMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSG 137
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD + S + +C + GR VH+ + D+ V N L++MYSK G +
Sbjct: 138 TAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGF 197
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGCGQS 372
LF M ++ +SW ++I+G+AQ+G EAL++F M A G P+ S+ S CG
Sbjct: 198 LLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVL 257
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G+LE G+ + + L N +L DMY++C + A+ +FY + +VSW ++I
Sbjct: 258 GSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSII 317
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
C++ G EA+ L +M LRP+ +T +L AC ++ G + + K+ +
Sbjct: 318 NACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKL-GL 376
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+ +++ + + + R A+D + D W ++L AC H+++E V +
Sbjct: 377 DGDVSVCNSLLSMYARCMDFSSAMDVFHETRDR-DVVTWNSILTACVQHQHLE----VVF 431
Query: 553 RLFEL 557
+LF L
Sbjct: 432 KLFNL 436
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 6/277 (2%)
Query: 268 CVCPEALVQGRLVHSHGIHY---GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
C AL G LVH H + + + N LI+MY +C +SAR +FD M +
Sbjct: 48 CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
VSW ++I+ +AQ +AL LF +M +G PD + S + C + G + +G+
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A +++V NAL+ MYSK G + D LF + EK +SW ++IAG A G +EA
Sbjct: 168 AMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEA 227
Query: 445 LDLFHQMMELDL-RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
L +F +M+ + PN F +V AC G LE G +L K Y+++ ++
Sbjct: 228 LQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVK-YRLDHNSYAGCSLS 286
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
D+ R KL+ A + D W +++ AC +
Sbjct: 287 DMYARCKKLESAKRVFYGID-APDLVSWNSIINACSV 322
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WNS + V LF ++++ + ++ + A A+L F +
Sbjct: 407 RDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVK 466
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM-PDRDVASWNAMIVGFAQM 133
+H K +D + ++D YAKC LD A KLF+ M + DV SW+++IVG+AQ
Sbjct: 467 QVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQS 526
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
G+ K L LF MR +G++ + VT +G+ A
Sbjct: 527 GYPRKALDLFARMRNLGVRPNHVTFVGVLTA 557
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+S + W+S I KAL LF RM+ + PN++TF + AC+++ L +
Sbjct: 510 NSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVG--LVDEG 567
Query: 76 IHGHIVKSPFWSDIFVQ---TTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVG 129
+ + + P + + + ++D+ A+ RL A K D+MP + D+ W ++ G
Sbjct: 568 CYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAG 625
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 320/615 (52%), Gaps = 24/615 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V N AL F+ M+K + + + + ++CA LS+ +H H +
Sbjct: 207 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 266
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F +D V+T +DMYAKCD + A LFDK + + S+NAMI G++Q K L
Sbjct: 267 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALL 326
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ + G+ D +++ G+ +A K LS ++ I + DV V N I Y
Sbjct: 327 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYG 386
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + R VSWN+II K ++L + M+ PD T
Sbjct: 387 KCQALAEAFRVFDEMRR--RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 444
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +L G +HS + G + SV +LI MYSKCG I+ A +
Sbjct: 445 GSVLKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 503
Query: 322 RTRVS--------------------WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
RT VS W ++ISGY K ++A LF M G PD T
Sbjct: 504 RTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 563
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++ C + LGK L+ +V + + L+DMYSKCG + D+R +F
Sbjct: 564 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSL 623
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ V+W MI G A +G+ EA+ LF +M+ +++PN VTF+++L+AC H G ++KG
Sbjct: 624 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 683
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YF +M + Y ++P+L HYS M D+LG+ GK+K AL+ ++ MP ++D IW TLL C IH
Sbjct: 684 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 743
Query: 542 R-NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
R N+E+ E L L+P ++ Y ++N+YA G W+ V++LR M+ ++KK PG S
Sbjct: 744 RNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 803
Query: 601 LVHINGKTCTFTVED 615
V + + F V D
Sbjct: 804 WVELKDELHVFLVGD 818
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 254/559 (45%), Gaps = 37/559 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + E K++ +F M + E + TF I K C+ L D IHG +V
Sbjct: 106 WNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVV 165
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D+ + ++DMYAK R + ++F +P+++ SW+A+I G Q L L
Sbjct: 166 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 225
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ V + ++ L L +H+ + AD V + YA
Sbjct: 226 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 285
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC++++ A+++F E R S+N++I G + + +L + ++ G D ++
Sbjct: 286 KCDNMQDAQILFDKSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +C + L +G ++ I LDV V N I MY KC + A +FD M
Sbjct: 344 SGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 403
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ + Q G E L LF +M + PD T S++ C G+L G
Sbjct: 404 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKAC-TGGSLGYGMEI 462
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT----------------- 424
+ G+ N V +LIDMYSKCG I +A ++ ++T
Sbjct: 463 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRL 522
Query: 425 ---VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
VSW ++I+G + + +A LF +MME+ + P++ T+ VL C A G G
Sbjct: 523 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLASAGLG 580
Query: 482 ---YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCA 537
+ ++ K Q + ++ S + D+ + G L ++ L F +S+ + D W ++C
Sbjct: 581 KQIHAQVIKKELQSDVYIS--STLVDMYSKCGDLHDSRLMFEKSL--RRDFVTWNAMICG 636
Query: 538 CKIHRNIEIGEYVAYRLFE 556
H E A +LFE
Sbjct: 637 YAHHGKGE----EAIQLFE 651
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 206/439 (46%), Gaps = 12/439 (2%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
+AH ++L + P + + DF+ + M+ + P D+
Sbjct: 26 KQAHAHMIL------SGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRM---PL-RDVVSW 75
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
M++ YAK + + A F+ MP RDV SWN+M+ G+ Q G K + +F +M G +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T + + + SL +H + +G D DV + + YAK + V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F+GI E + VSW++II GC + +L F++ M + S+L SC
Sbjct: 196 FQGIPE--KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
L G +H+H + F D V + MY+KC ++ A+ LFD + R S+ AMI+
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMIT 313
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY+Q+ +AL LF + ++G D +++ + C L G + A L
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSL 373
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+V V NA IDMY KC ++ +A +F + + VSW +IA NG+ E L LF M+
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433
Query: 453 ELDLRPNRVTFLAVLQACT 471
+ P+ TF +VL+ACT
Sbjct: 434 RSRIEPDEFTFGSVLKACT 452
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 154/353 (43%), Gaps = 12/353 (3%)
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV N I+ YAK N++ A F + +R VVSWNS++ G + S+ +
Sbjct: 71 DVVSWNKMINGYAKSNNMVKASFFFNMMP--VRDVVSWNSMLSGYLQNGETLKSIEVFVD 128
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G D T +L C C E G +H + G D DV + L+ MY+K
Sbjct: 129 MGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKR 188
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ +F G+ ++ VSW+A+I+G Q L AL+ F M+ S++
Sbjct: 189 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 248
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C L LG +A + +V A +DMY+KC ++ DA+ LF S+
Sbjct: 249 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSY 308
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI G + +AL LFH++M L + ++ V +AC L +G ++L K
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIK 368
Query: 489 VYQVNPELNHYSCMA----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
L+ C+A D+ G+ L EA M + DA W ++ A
Sbjct: 369 -----SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 39/247 (15%)
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C AL G+ H+H I GF V+N L+ +Y+ D SA +FD M R VSW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG----ALEL------ 377
MI+GYA+ ++ +A FF M V D+V+ SM+SG Q+G ++E+
Sbjct: 76 NKMINGYAKSNNMVKA-SFFFNMMP---VRDVVSWNSMLSGYLQNGETLKSIEVFVDMGR 131
Query: 378 -GKWFDNYA-------CSG-----------------GLKDNVMVCNALIDMYSKCGSIGD 412
G FD CS G +V+ +AL+DMY+K +
Sbjct: 132 AGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVE 191
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
+ +F +PEK VSW+ +IAGC N AL F +M +++ ++ + +VL++C
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 473 AGFLEKG 479
L G
Sbjct: 252 LSELRLG 258
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 321/600 (53%), Gaps = 9/600 (1%)
Query: 22 WNSQIREAVDK---NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
WNS I + ++ + LFR M+ DI PN T I KA + L + H
Sbjct: 83 WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE- 137
+VK + DI+V T++V MY K ++ K+F MP+R+ +W+ M+ G+A G +E
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 138 --KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
KV LF + G +D+V L+ A ++ L + +H I G+ V++ N
Sbjct: 203 AIKVFNLFLREKEEGSDSDYVFTAVLSSLAA-TIYVGLGRQIHCITIKNGLLGFVALSNA 261
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ Y+KC L A +F G R ++W++++ G + + +++ + M G +
Sbjct: 262 LVTMYSKCESLNEACKMFD--SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P T+V +L++C L +G+ +HS + GF+ + L+ MY+K G + AR
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + +R WT++ISGY Q D +EAL L+ M+ AG +P+ T+ S++ C L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
ELGK + G V + +AL MYSKCGS+ D +F P K VVSW MI+G
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ NG+ EAL+LF +M+ + P+ VTF+ ++ AC+H GF+E+GW YFN+M+ ++P+
Sbjct: 500 SHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPK 559
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
++HY+CM DLL R G+LKEA +F++S I +W LL ACK H E+G Y +L
Sbjct: 560 VDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLM 619
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L ++ YV+++ IY GR V + M+ N V K G S + + + F V D
Sbjct: 620 ALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGD 679
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 226/439 (51%), Gaps = 9/439 (2%)
Query: 47 KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLD 106
+ ++ P+ T ++ + + + +HG I+++ + I +V+ YAKC +L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 107 CAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK---VLCLFYNMRLVGIQADFVTVMGLTQ 163
A+ +F+ + +DV SWN++I G++Q G + V+ LF MR I + T+ G+ +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A + ++ + H+ + + D+ V + + Y K ++ VF + E R
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE--RNT 184
Query: 224 VSWNSIIGGCTYGDKFDDSL---NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+W++++ G + ++++ N + +G D ++LSS + GR +
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQI 243
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H I G V++ N L++MYSKC ++ A +FD DR ++W+AM++GY+Q G+
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
EA++LF M +AG P T++ +++ C LE GK ++ G + ++ AL
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+DMY+K G + DAR+ F L E+ V WT++I+G N + EAL L+ +M + PN
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 461 VTFLAVLQACTHAGFLEKG 479
T +VL+AC+ LE G
Sbjct: 424 PTMASVLKACSSLATLELG 442
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 185/380 (48%), Gaps = 19/380 (5%)
Query: 167 HAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
H++ +L+ ++VH I G + N ++ YAKC L A +F I + VV
Sbjct: 24 HSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII--CKDVV 81
Query: 225 SWNSIIGGCTYGDKFDDS---LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
SWNS+I G + S + +R M P+ T+ + + ++ GR H
Sbjct: 82 SWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAH 141
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ + D+ V +L+ MY K G ++ +F M +R +W+ M+SGYA +G ++
Sbjct: 142 ALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVE 201
Query: 342 EALR---LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
EA++ LF + G D V +++S + + LG+ GL V + N
Sbjct: 202 EAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+ MYSKC S+ +A ++F + ++ ++W+ M+ G + NGE +EA+ LF +M ++P
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKP 320
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA--- 515
+ T + VL AC+ +LE+G + + K+ L + + D+ + G L +A
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKG 379
Query: 516 LDFVQSMPIKSDAGIWGTLL 535
D +Q + D +W +L+
Sbjct: 380 FDCLQ----ERDVALWTSLI 395
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 201/598 (33%), Positives = 328/598 (54%), Gaps = 8/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ +R E+ + LL++++M + P+ T+PF+ ++C+ S+ + + IHG++V
Sbjct: 93 FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152
Query: 82 KSPFWSDIF--VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K F D+F V T + +MY +C + A++LFDK +D+ +++ Q E +
Sbjct: 153 KLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGI 210
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+F M + D T L + + L K VH I + D+ V +S
Sbjct: 211 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y+K L A +F + E R V WN +I K + L ++ M G R D+
Sbjct: 271 YSKLRSLVDARKLFDKMPEKDRVV--WNIMIAAYAREGKPTECLELFKSMARSGIRSDLF 328
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T + ++SS + + G+ H+H + G D VSV N+LI MY +C +DSA +F+ M
Sbjct: 329 TALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWM 388
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
D++ +SW+AMI GY + G AL LF M++ G D V +++++ GALE K
Sbjct: 389 TDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVK 448
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY--ALPEKTVVSWTTMIAGCAL 437
+ Y+ GL + AL+ Y+KCGSI A+ LF + +K ++ W +MI+ A
Sbjct: 449 YLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHAN 508
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G++ + L+++M + +P++VTFL +L AC ++G +EKG +F MT+ Y P
Sbjct: 509 HGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQE 568
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+CM +LLGR G + EA + V++MPIK DA +WG LL ACK+H ++ E+ A +L +
Sbjct: 569 HYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINM 628
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP +A Y+ ++NIYA G+WDGVA +R+ ++ +KK PG S + ING F V D
Sbjct: 629 EPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVAD 686
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 206/452 (45%), Gaps = 20/452 (4%)
Query: 39 LLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS--------QMIHGHIVKSPFWSDIF 90
+L R K P L FP L+S Q IH + F +
Sbjct: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+ + ++D YA L+ + ++F + D ++ +NA++ + G E+ L ++ M
Sbjct: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ D T + ++ ++ +++H + + +G D V Y +C + + A
Sbjct: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
Query: 211 LVF--RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR---HMIYDGFRPDVTTVVSLL 265
+F R +++ + W S + T G + D+ +R MI + PD T +LL
Sbjct: 181 QLFDKRSVKD-----LGWPSSL--TTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLL 233
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
++ ++VH I D+ V ++S+YSK + AR LFD M ++ RV
Sbjct: 234 RFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRV 293
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W MI+ YA++G E L LF +M +G DL T L +IS Q ++ GK +
Sbjct: 294 VWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHI 353
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
G V V N+LIDMY +C + A ++F + +K+V+SW+ MI G NG+ + AL
Sbjct: 354 LRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTAL 413
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
LF +M ++ + V + +L A H G LE
Sbjct: 414 SLFSKMKSDGIQADFVIMINILPAFVHIGALE 445
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W++ I+ V ++ AL LF +MK + I+ + + I A + + +H
Sbjct: 392 SVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLH 451
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF--DKMPDRDVASWNAMIVGFAQMGF 135
G+ +K S + T ++ YAKC ++ A +LF +K+ D+D+ WN+MI A G
Sbjct: 452 GYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGD 511
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L+ M+ + D VT +GL A +++
Sbjct: 512 WSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNS 544
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 115/280 (41%), Gaps = 5/280 (1%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ T+ L S C + L Q +H+ I +GF + ++ + LI Y+ G ++ + +F
Sbjct: 27 LNTLSLLFSRCNSIQHLQQ---IHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFC 83
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ D + A++ + G+ + L ++ M A PD T ++ C +
Sbjct: 84 SVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGF 143
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ Y G +V AL +MY +C +A +LF K + +++
Sbjct: 144 GRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQ 203
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
N +F +M+ L P+ TF +L+ ++ + + V +++ +L
Sbjct: 204 NDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLA-KIVHCIAIVSKLSGDLL 262
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + L + L +A MP K D +W ++ A
Sbjct: 263 VNTAVLSLYSKLRSLVDARKLFDKMPEK-DRVVWNIMIAA 301
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 186/526 (35%), Positives = 296/526 (56%), Gaps = 4/526 (0%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D F +V Y + R+ AY+ FD+M RDV +WNAM+ G + + + LF M
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+ G+ D VTV + + +L ++H + + G+D ++ VCN I Y K L+
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
VF G+ R +V+WNSII G G + ++ + M G PDV T++SL S+
Sbjct: 223 EVRKVFDGMSS--RDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280
Query: 268 CVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS 326
+ GR VH + + G+D+ D+ N ++ MY+K I++A+ +FD M R VS
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEA-AGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W +I+GY Q G EA+ ++ M+ G P T +S++ GAL+ G +
Sbjct: 341 WNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
GL +V V +ID+Y+KCG + +A LF P ++ W +I+G ++G +AL
Sbjct: 401 IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
LF QM + + P+ VTF+++L AC+HAG +++G +FN+M Y + P HY+CM D+
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPY 565
GR G+L +A DF+++MPIK D+ IWG LL AC+IH N+E+G+ + LFEL+P + Y
Sbjct: 521 FGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYY 580
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
V M+N+YA G+WDGV +R++++R ++K PG S + + F
Sbjct: 581 VLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVF 626
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 223/457 (48%), Gaps = 8/457 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WN+ + A +A+ LF RM + + +T + C L D +
Sbjct: 131 RHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALAL 190
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H + VK ++FV M+D+Y K L+ K+FD M RD+ +WN++I G Q G
Sbjct: 191 AMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGG 250
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVC 193
+ + +F MR G+ D +T++ L A + +SVH + + G D D+
Sbjct: 251 QVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAG 310
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYD 252
N + YAK + ++ A+ +F + +R VSWN++I G ++++ Y HM ++
Sbjct: 311 NAIVDMYAKLSKIEAAQRMFDSMP--VRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHE 368
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G +P T VS+L + AL QG +H+ I G +LDV V +I +Y+KCG +D A
Sbjct: 369 GLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEA 428
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
LF+ R+ W A+ISG G +AL LF M+ G PD VT +S+++ C +
Sbjct: 429 MLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHA 488
Query: 373 GALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTT 430
G ++ G+ +F+ + G+K ++DM+ + G + DA + +P K + W
Sbjct: 489 GLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGA 548
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
++ C ++G + ELD P V + ++
Sbjct: 549 LLGACRIHGNVEMGKVASQNLFELD--PKNVGYYVLM 583
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 384 YACS---GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+AC+ G L+ + AL+ Y + G + DA F + + V +W M++G N
Sbjct: 91 HACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNAR 150
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA+ LF +M+ + + VT +VL C G +L + ++ EL +
Sbjct: 151 AAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALA-MHLYAVKHGLDDELFVCN 209
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
M D+ G+ G L+E M + D W +++
Sbjct: 210 AMIDVYGKLGMLEEVRKVFDGMSSR-DLVTWNSII 243
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 331/595 (55%), Gaps = 16/595 (2%)
Query: 22 WNSQIR---EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
WN I A + +E + LF M + + P+ TFP + KAC + D IH
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+K F D++V +++ +Y++ + A LFD+MP RD+ SWNAMI G+ Q G ++
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L L +R + D VTV+ L A A + ++HS+ I G+++++ V N I
Sbjct: 235 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YA+ L+ + VF + +R ++SWNSII ++ +++ ++ M +PD
Sbjct: 291 LYAEFGRLRDCQKVFDRMY--VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFD 317
T++SL S + R V + G+ L D+++ N ++ MY+K G +DSAR +F+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALE 376
+ + +SW +ISGYAQ G EA+ ++ ME GE+ + T +S++ C Q+GAL
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G GL +V V +L DMY KCG + DA LFY +P V W T+IA
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G +A+ LF +M++ ++P+ +TF+ +L AC+H+G +++G F +M Y + P L
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM D+ GR G+L+ AL F++SM ++ DA IWG LL AC++H N+++G+ + LFE
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 648
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+EP +V ++N+YA G+W+GV +R++ ++K PG S + ++ K F
Sbjct: 649 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVF 703
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 239/475 (50%), Gaps = 20/475 (4%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H +V S ++ + +V++Y + A FD + +RDV +WN MI G+ +
Sbjct: 70 AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 133 MGFLEKVL-CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G +V+ C M G+ D+ T + +A + + +H + G DV
Sbjct: 130 AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA---CRTVIDGNKIHCLALKFGFMWDVY 186
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V + I Y++ + A ++F E +R + SWN++I G ++L +
Sbjct: 187 VAASLIHLYSRYKAVGNARILFD--EMPVRDMGSWNAMISGYCQSGNAKEALT-----LS 239
Query: 252 DGFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G R D TVVSLLS+C +G +HS+ I +G + ++ V N LI +Y++ G +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ +FD M R +SW ++I Y A+ LF M + PD +T++S+ S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 371 QSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q G + + + G +++ + NA++ MY+K G + AR +F LP V+SW
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T+I+G A NG EA+++++ M E ++ N+ T+++VL AC+ AG L +G L +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG---MKLHGR 476
Query: 489 VYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + L+ + + +AD+ G+ G+L++AL +P + ++ W TL+ H
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFH 530
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 17/288 (5%)
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+ RLV S I +V + L+++Y G++ AR FD + +R +W MISGY
Sbjct: 73 LHARLVVSKQIQ-----NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 335 AQKGDLDEALRLF-FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
+ G+ E +R F M ++G PD T S++ C + G A G +
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWD 184
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V V +LI +YS+ ++G+AR LF +P + + SW MI+G +G EAL L + +
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
+D VT +++L ACT AG +G + K + + EL + + DL G+L+
Sbjct: 245 MD----SVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLR 299
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNI--EIGEYVAYRLFELEP 559
+ M ++ D W +++ A +++ I + RL ++P
Sbjct: 300 DCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 314/599 (52%), Gaps = 4/599 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMI 76
I W + I+ V N + +A++LF M+ D + P+ + KAC + S+ Y + +
Sbjct: 65 IVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESL 124
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H + VK+ S +FV ++++DMY + +++ + ++F +MP R+ +W A+I G G
Sbjct: 125 HAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 184
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ L F M +D T +A + + K +H+ I G DA V V N+
Sbjct: 185 KEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSL 244
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y +C +++ +F + E R VVSW S+I + ++ + M P
Sbjct: 245 ATMYTECGEMRDGLCLFENMSE--RDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPP 302
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T ++ S+C LV G +H + G + +SV N+++ MYS CG +DSA LF
Sbjct: 303 NEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLF 362
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
GM R +SW+ +I GY+Q G +EA + F M +G P + S++S G LE
Sbjct: 363 QGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLE 422
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ A GL+ N V + LI+MYSKCG+I +A ++F +VS T MI G A
Sbjct: 423 GGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYA 482
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G+ EA+DLF + +++ P+ VTF++VL ACTH+G L+ G+ YFNLM + Y + P
Sbjct: 483 EHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAK 542
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM DLL R G+L EA + M K D +W TLL ACK +IE G A R+ E
Sbjct: 543 EHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 602
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P A V +ANIY+ G + AN+R MK V K PG S + I F D
Sbjct: 603 LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGD 661
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 200/413 (48%), Gaps = 5/413 (1%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV--GIQADFVTVMGLT 162
L A ++FDKMP RD+ SW A+I G+ ++ + LF MR+V + D V +
Sbjct: 50 LRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVL 109
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
+A + +++ +S+H++ + + + V V ++ + Y + ++ + VF E R
Sbjct: 110 KACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFS--EMPFRN 167
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+W +II G + ++ + L ++ M D T L +C + G+ +H+
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHT 227
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
H I GFD V V N+L +MY++CG++ LF+ M +R VSWT++I Y + G ++
Sbjct: 228 HVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEK 287
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A+ F M + P+ T +M S C L G+ S GL D++ V N+++
Sbjct: 288 AVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMK 347
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MYS CG + A LF + + ++SW+T+I G + G EA F M + +P
Sbjct: 348 MYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFA 407
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++L + LE G + + + + S + ++ + G +KEA
Sbjct: 408 LASLLSVSGNMAVLEGG-RQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEA 459
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 8/259 (3%)
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV--PDLVTVLS 364
G++ AR +FD M R VSWTA+I GY + DEA+ LF AM PD V
Sbjct: 48 GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++ CGQS + G+ YA L +V V ++L+DMY + G I + +F +P +
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRN 167
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YF 483
V+WT +I G G + E L F +M + + TF L+AC AG + +G
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKAC--AGLRQVKYGKQI 225
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI--H 541
+ V + + + +A + G++++ L ++M + D W +L+ A H
Sbjct: 226 HTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMS-ERDVVSWTSLIVAYNRIGH 284
Query: 542 RNIEIGEYVAYRLFELEPH 560
+ ++ R ++ P+
Sbjct: 285 EEKAVETFIKMRNSQVPPN 303
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 206/636 (32%), Positives = 329/636 (51%), Gaps = 44/636 (6%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD---FLYSQMIH 77
WN+ I + +A LF M K I+PN T I CA L + + Y + +H
Sbjct: 149 SWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVH 208
Query: 78 GHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H+++ D+ V +++ Y + +++ A LF M RD+ SWNA+I G+A G
Sbjct: 209 CHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEW 268
Query: 137 EKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCN 194
K L LF + L I+ D VT++ + A H +L + K +H + I H G+ D SV N
Sbjct: 269 LKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGN 328
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S YAKCN + A F I + ++SWN+I+ T +N M+ +G
Sbjct: 329 ALLSFYAKCNYTQAALQTFLMISR--KDLISWNAILDAFTESGCETHLVNLLHWMLREGI 386
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDI-- 309
RPD T+++++ + + + HS+ I +G D ++ N ++ Y+KCG++
Sbjct: 387 RPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKY 446
Query: 310 ------------------------------DSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
D A +F+ M + +W M+ YA+
Sbjct: 447 AVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDF 506
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
D+AL LF ++ G PD+VT++S++ C ++ + + Y D V + A
Sbjct: 507 PDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFND-VRLNGA 565
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
IDMYSKCGS+ A +LF + P+K +V +T M+ G A++G EAL +F M+EL ++P+
Sbjct: 566 FIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPD 625
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
V AVL AC+HAG +++GW FN + KV+ P + Y+C+ DLL R G++K+A FV
Sbjct: 626 HVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFV 685
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
MPI+++A IWGTLL AC+ H +E+G VA LF++E + YV M+N+YA RWD
Sbjct: 686 TRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWD 745
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
GV +R +M+ ++KK G S + + + F D
Sbjct: 746 GVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGD 781
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 228/485 (47%), Gaps = 50/485 (10%)
Query: 34 EAHKA--LLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
++H+A + LFR M N+ +PN++T + CA+L + + +H +++KS S
Sbjct: 58 QSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLREDA-GKSVHSYVIKSGLESHTL 116
Query: 91 VQTTMVDMYAKCDRLDC--AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL 148
++ MYAKC L C AY F+++ +DV SWNA+I GF++ F E+ LF+ M
Sbjct: 117 AGNALISMYAKCG-LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLK 175
Query: 149 VGIQADFVTVMGLTQAAIHAKH---LSLLKSVHSFGIH-IGVDADVSVCNTWISAYAKCN 204
IQ ++ T+ + + K VH + + + DVSV N+ +S Y +
Sbjct: 176 GPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIG 235
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVS 263
++ AE +FR ++ R +VSWN+II G ++ +L + I + +PD T+VS
Sbjct: 236 QMEKAEFLFRNMKS--RDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVS 293
Query: 264 LLSSCVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+L +C L + +H + I H G D SV N L+S Y+KC +A F + +
Sbjct: 294 VLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRK 353
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC------------- 369
+SW A++ + + G + L M G PD +T+L++I
Sbjct: 354 DLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETH 413
Query: 370 ----------GQSGALELGKWFDNYACSGGLK------------DNVMVCNALIDMYSKC 407
G +G D YA G +K NV+ CN++I Y
Sbjct: 414 SYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNS 473
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
S DA +F + E + +W M+ A N +AL LFH++ ++P+ VT +++L
Sbjct: 474 SSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSIL 533
Query: 468 QACTH 472
AC H
Sbjct: 534 PACAH 538
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 187/382 (48%), Gaps = 10/382 (2%)
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE-KVLCLFYNMRLVGIQA 153
++++YAK LD KLF +M RD WN ++ G A E +V+ LF M +V
Sbjct: 19 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAK 78
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL-KMAELV 212
+ + KSVHS+ I G+++ N IS YAKC + A
Sbjct: 79 PNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAA 138
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F IE + VVSWN++I G + +++ + M+ +P+ T+ S+L C E
Sbjct: 139 FNRIE--FKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 196
Query: 273 ---ALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
G+ VH H + DVSVIN+L+S Y + G ++ A FLF M R VSW
Sbjct: 197 ENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWN 256
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACS 387
A+I+GYA G+ +AL LF + + PD VT++S++ C L++ K Y
Sbjct: 257 AIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIR 316
Query: 388 -GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
GL+++ V NAL+ Y+KC A + F + K ++SW ++ +G ++
Sbjct: 317 HPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVN 376
Query: 447 LFHQMMELDLRPNRVTFLAVLQ 468
L H M+ +RP+ +T L ++Q
Sbjct: 377 LLHWMLREGIRPDSITILTIIQ 398
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ-KGDLDEALRL 346
G+D S+ L+++Y+K G +D LF M R V W ++SG A + E +RL
Sbjct: 11 GYD---SLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRL 67
Query: 347 FFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
F AM E P+ VT+ ++ C + + GK +Y GL+ + + NALI MY+
Sbjct: 68 FRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYA 126
Query: 406 KCGSI-GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
KCG + DA F + K VVSW +IAG + N EA LFH M++ ++PN T
Sbjct: 127 KCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIA 186
Query: 465 AVLQACTHAGFLEKGWGY 482
++L C LE+ GY
Sbjct: 187 SILPVCAS---LEENAGY 201
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ + WN +R + + +AL LF ++ ++P+ +T I ACA ++ +
Sbjct: 489 TDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQC 548
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG+++++ F +D+ + +DMY+KC + AYKLF P +D+ + AM+ GFA G
Sbjct: 549 HGYVIRACF-NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMG 607
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSF 180
E+ L +F M +G++ D V + + A HA K + ++ VH F
Sbjct: 608 EEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGF 658
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 210/615 (34%), Positives = 319/615 (51%), Gaps = 24/615 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V N AL F+ M+K + + + + ++CA LS+ +H H +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F +D V+T +DMYAKCD + A LFD + + S+NAMI G++Q K L
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ + G+ D +++ G+ +A K LS ++ I + DV V N I Y
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + R VSWN+II K ++L + M+ PD T
Sbjct: 429 KCQALAEAFRVFDEMRR--RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +L G +HS + G + SV +LI MYSKCG I+ A +
Sbjct: 487 GSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 322 RTRVS--------------------WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
R VS W ++ISGY K ++A LF M G PD T
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++ C + LGK L+ +V +C+ L+DMYSKCG + D+R +F
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ V+W MI G A +G+ EA+ LF +M+ +++PN VTF+++L+AC H G ++KG
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YF +M + Y ++P+L HYS M D+LG+ GK+K AL+ ++ MP ++D IW TLL C IH
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 785
Query: 542 R-NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
R N+E+ E L L+P ++ Y ++N+YA G W+ V++LR M+ ++KK PG S
Sbjct: 786 RNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 845
Query: 601 LVHINGKTCTFTVED 615
V + + F V D
Sbjct: 846 WVELKDELHVFLVGD 860
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 256/558 (45%), Gaps = 35/558 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + E+ K++ +F M + IE + TF I K C+ L D IHG +V
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D+ + ++DMYAK R + ++F +P+++ SW+A+I G Q L L
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ V + ++ L L +H+ + AD V + YA
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC++++ A+++F E R S+N++I G + + +L + ++ G D ++
Sbjct: 328 KCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +C + L +G ++ I LDV V N I MY KC + A +FD M
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ + Q G E L LF +M + PD T S++ C G+L G
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEI 504
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL---FYALP----------------- 421
+ G+ N V +LIDMYSKCG I +A ++ F+
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ VSW ++I+G + + +A LF +MME+ + P++ T+ VL C A G G
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLASAGLG 622
Query: 482 YFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCAC 538
+ +V + + + Y C + D+ + G L ++ L F +S+ + D W ++C
Sbjct: 623 K-QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL--RRDFVTWNAMICGY 679
Query: 539 KIHRNIEIGEYVAYRLFE 556
H E A +LFE
Sbjct: 680 AHHGKGE----EAIQLFE 693
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 205/455 (45%), Gaps = 35/455 (7%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQT-------------- 93
N + N F F+ K CAK + H H++ S F FV
Sbjct: 44 NSVSTTN--FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVS 101
Query: 94 -----------------TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
M++ Y+K + + A F+ MP RDV SWN+M+ G+ Q G
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K + +F +M GI+ D T + + + SL +H + +G D DV +
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAK + VF+GI E + VSW++II GC + +L F++ M
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPE--KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ S+L SC L G +H+H + F D V + MY+KC ++ A+ LF
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF 339
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + R S+ AMI+GY+Q+ +AL LF + ++G D +++ + C L
Sbjct: 340 DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G A L +V V NA IDMY KC ++ +A +F + + VSW +IA
Sbjct: 400 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
NG+ E L LF M+ + P+ TF ++L+ACT
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 153/353 (43%), Gaps = 12/353 (3%)
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV N I+ Y+K ND+ A F + +R VVSWNS++ G + S+ +
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMP--VRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +G D T +L C E G +H + G D DV + L+ MY+K
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ +F G+ ++ VSW+A+I+G Q L AL+ F M+ S++
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C L LG +A + +V A +DMY+KC ++ DA+ LF S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI G + +AL LFH++M L + ++ V +AC L +G + L K
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 489 VYQVNPELNHYSCMA----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
L+ C+A D+ G+ L EA M + DA W ++ A
Sbjct: 411 -----SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD----LDVSVINTLIS 301
+ HMI GFRP + LL V +V FD DV N +I+
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV--------FDKMPLRDVVSWNKMIN 122
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
YSK D+ A F+ M R VSW +M+SGY Q G+ +++ +F M G D T
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++ C LG G +V+ +AL+DMY+K ++ +F +P
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP 242
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EK VSW+ +IAGC N AL F +M +++ ++ + +VL++C L G
Sbjct: 243 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 206/636 (32%), Positives = 329/636 (51%), Gaps = 44/636 (6%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD---FLYSQMIH 77
WN+ I + +A LF M K I+PN T I CA L + + Y + +H
Sbjct: 210 SWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVH 269
Query: 78 GHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H+++ D+ V +++ Y + +++ A LF M RD+ SWNA+I G+A G
Sbjct: 270 CHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEW 329
Query: 137 EKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCN 194
K L LF + L I+ D VT++ + A H +L + K +H + I H G+ D SV N
Sbjct: 330 LKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGN 389
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S YAKCN + A F I + ++SWN+I+ T +N M+ +G
Sbjct: 390 ALLSFYAKCNYTQAALQTFLMISR--KDLISWNAILDAFTESGCETHLVNLLHWMLREGI 447
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDI-- 309
RPD T+++++ + + + HS+ I +G D ++ N ++ Y+KCG++
Sbjct: 448 RPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKY 507
Query: 310 ------------------------------DSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
D A +F+ M + +W M+ YA+
Sbjct: 508 AVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDF 567
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
D+AL LF ++ G PD+VT++S++ C ++ + + Y D V + A
Sbjct: 568 PDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFND-VRLNGA 626
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
IDMYSKCGS+ A +LF + P+K +V +T M+ G A++G EAL +F M+EL ++P+
Sbjct: 627 FIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPD 686
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
V AVL AC+HAG +++GW FN + KV+ P + Y+C+ DLL R G++K+A FV
Sbjct: 687 HVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFV 746
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
MPI+++A IWGTLL AC+ H +E+G VA LF++E + YV M+N+YA RWD
Sbjct: 747 TRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWD 806
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
GV +R +M+ ++KK G S + + + F D
Sbjct: 807 GVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGD 842
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 213/442 (48%), Gaps = 12/442 (2%)
Query: 37 KALLLFRRMKKNDI--EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+AL LF + + +PN + K+C +S + ++HG+ +K S +
Sbjct: 20 EALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKG 79
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE-KVLCLFYNMRLVGIQA 153
++++YAK LD KLF +M RD WN ++ G A E +V+ LF M +V
Sbjct: 80 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAK 139
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL-KMAELV 212
+ + KSVHS+ I G+++ N IS YAKC + A
Sbjct: 140 PNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAA 199
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F IE + VVSWN++I G + +++ + M+ +P+ T+ S+L C E
Sbjct: 200 FNRIE--FKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 257
Query: 273 ---ALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
G+ VH H + DVSVIN+L+S Y + G ++ A FLF M R VSW
Sbjct: 258 ENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWN 317
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACS 387
A+I+GYA G+ +AL LF + + PD VT++S++ C L++ K Y
Sbjct: 318 AIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIR 377
Query: 388 -GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
GL+++ V NAL+ Y+KC A + F + K ++SW ++ +G ++
Sbjct: 378 HPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVN 437
Query: 447 LFHQMMELDLRPNRVTFLAVLQ 468
L H M+ +RP+ +T L ++Q
Sbjct: 438 LLHWMLREGIRPDSITILTIIQ 459
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 228/485 (47%), Gaps = 50/485 (10%)
Query: 34 EAHKA--LLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
++H+A + LFR M N+ +PN++T + CA+L + + +H +++KS S
Sbjct: 119 QSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLREDA-GKSVHSYVIKSGLESHTL 177
Query: 91 VQTTMVDMYAKCDRLDC--AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL 148
++ MYAKC L C AY F+++ +DV SWNA+I GF++ F E+ LF+ M
Sbjct: 178 AGNALISMYAKCG-LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLK 236
Query: 149 VGIQADFVTVMGLTQAAIHAKH---LSLLKSVHSFGIH-IGVDADVSVCNTWISAYAKCN 204
IQ ++ T+ + + K VH + + + DVSV N+ +S Y +
Sbjct: 237 GPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIG 296
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVS 263
++ AE +FR ++ R +VSWN+II G ++ +L + I + +PD T+VS
Sbjct: 297 QMEKAEFLFRNMKS--RDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVS 354
Query: 264 LLSSCVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+L +C L + +H + I H G D SV N L+S Y+KC +A F + +
Sbjct: 355 VLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRK 414
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC------------- 369
+SW A++ + + G + L M G PD +T+L++I
Sbjct: 415 DLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETH 474
Query: 370 ----------GQSGALELGKWFDNYACSGGLK------------DNVMVCNALIDMYSKC 407
G +G D YA G +K NV+ CN++I Y
Sbjct: 475 SYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNS 534
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
S DA +F + E + +W M+ A N +AL LFH++ ++P+ VT +++L
Sbjct: 535 SSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSIL 594
Query: 468 QACTH 472
AC H
Sbjct: 595 PACAH 599
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ + WN +R + + +AL LF ++ ++P+ +T I ACA ++ +
Sbjct: 550 TDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQC 609
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG+++++ F +D+ + +DMY+KC + AYKLF P +D+ + AM+ GFA G
Sbjct: 610 HGYVIRACF-NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMG 668
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSF 180
E+ L +F M +G++ D V + + A HA K + ++ VH F
Sbjct: 669 EEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGF 719
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 316/574 (55%), Gaps = 3/574 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
+L LF +M++ ++ P+ + AC+ L + IH ++++ D+ V ++D
Sbjct: 122 SLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLID 181
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
Y KC+R+ KLFD+M +++ SW MI G+ Q F + + LF M +G + D
Sbjct: 182 FYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFA 241
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + + L + VH++ I ++++ V N I YAK N L A+ VF +
Sbjct: 242 CTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMA 301
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E + V+S+N++I G + +K ++L + M F P + T VSLL AL
Sbjct: 302 E--QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELS 359
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+ +H I G LD+ + LI +YSKC + AR +F+ M ++ V W AM GY Q
Sbjct: 360 KQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQH 419
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
+ +EAL+L+ ++ + + P+ T ++I+ +L G+ F N GL V
Sbjct: 420 LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 479
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NAL+DMY+KCGSI +AR++F + + VV W +MI+ A +GE EAL +F +MM+ ++
Sbjct: 480 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 539
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VTF+AVL AC+HAG +E G +FN M + + P HY+C+ LLGR GKL EA +
Sbjct: 540 PNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKE 598
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F++ MPI+ A +W +LL AC+I N+E+G+Y A +P + Y+ ++NI+A G
Sbjct: 599 FIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGM 658
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
W V +R M ++V K PG+S + +N K F
Sbjct: 659 WADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVF 692
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/524 (29%), Positives = 261/524 (49%), Gaps = 9/524 (1%)
Query: 25 QIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKS 83
+ ++ D+ + +AL++F +++ E PN + +AC +L +HG +V+S
Sbjct: 7 KTKDMEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRS 66
Query: 84 PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF 143
F D++V T+++D Y+K ++ A +FD++ ++ +W +I G+ + G L LF
Sbjct: 67 GFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELF 126
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
MR + D V + A + L K +H++ + G + DVSV N I Y KC
Sbjct: 127 AQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKC 186
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRPDVTTVV 262
N +K +F + ++ ++SW ++I G + FD +++ + M G++PD
Sbjct: 187 NRVKAGRKLFDQMV--VKNIISWTTMISGYMQ-NSFDWEAMKLFGEMNRLGWKPDGFACT 243
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S+L+SC EAL QGR VH++ I + + V N LI MY+K + A+ +FD M ++
Sbjct: 244 SVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQ 303
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
+S+ AMI GY+ + L EAL LF M P L+T +S++ ALEL K
Sbjct: 304 NVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIH 363
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
G+ ++ +ALID+YSKC + DAR +F + EK +V W M G + E
Sbjct: 364 GLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENE 423
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSC 501
EAL L+ + +PN TF A++ A ++ L G + N + K+ P + +
Sbjct: 424 EALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--A 481
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ D+ + G ++EA S I D W +++ H E
Sbjct: 482 LVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAE 524
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 211/422 (50%), Gaps = 3/422 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + I + + +A+ LF M + +P+ + +C L + +H
Sbjct: 204 IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHA 263
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ +K+ S+ FV+ ++DMYAK + L A K+FD M +++V S+NAMI G++ L +
Sbjct: 264 YTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSE 323
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF+ MR+ +T + L + L L K +H I GV D+ + I
Sbjct: 324 ALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALID 383
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC+ +K A VF + E + +V WN++ G T + +++L Y + + +P+
Sbjct: 384 VYSKCSYVKDARHVFEEMNE--KDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNE 441
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +L+++ +L G+ H+ + G D V N L+ MY+KCG I+ AR +F+
Sbjct: 442 FTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS 501
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
R V W +MIS +AQ G+ +EAL +F M G P+ VT ++++S C +G +E G
Sbjct: 502 SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDG 561
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
N G+K ++ + + G + +A+E +P E + W ++++ C +
Sbjct: 562 LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRI 621
Query: 438 NG 439
G
Sbjct: 622 AG 623
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 154/322 (47%), Gaps = 5/322 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I + + +AL LF M+ P+ LTF + A L S+ IHG I+
Sbjct: 308 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 367
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+F + ++D+Y+KC + A +F++M ++D+ WNAM G+ Q E+ L
Sbjct: 368 KXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 427
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ ++ + + T L AA + L + H+ + +G+D V N + YA
Sbjct: 428 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 487
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F R VV WNS+I + +++L +R M+ +G +P+ T
Sbjct: 488 KCGSIEEARKMFNS--SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTF 545
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM- 319
V++LS+C V+ L H + + +G ++S+ + G + A+ + M
Sbjct: 546 VAVLSAC-SHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP 604
Query: 320 CDRTRVSWTAMISGYAQKGDLD 341
+ + W +++S G+++
Sbjct: 605 IEPAAIVWRSLLSACRIAGNVE 626
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/570 (34%), Positives = 324/570 (56%), Gaps = 12/570 (2%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M + ++P+ TFP + KAC ++D IH +K F D++V +++ +Y +
Sbjct: 144 MLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGA 200
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
+ A LFD+MP RD+ SWNAMI G+ Q G ++ L L +R + D VTV+ L A
Sbjct: 201 VVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSA 256
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
A + ++HS+ I G+++++ V N I YA+ LK + VF + +R ++
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMY--VRDLI 314
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SWNSII ++ ++ ++ M +PD T++SL S + R V
Sbjct: 315 SWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFT 374
Query: 285 IHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ G+ L D+++ N ++ MY+K G +DSAR +F+ + ++ +SW +ISGYAQ G EA
Sbjct: 375 LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEA 434
Query: 344 LRLFFAMEA-AGEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
+ ++ ME GE+ + T +S++ C Q+GAL G GL +V V +L
Sbjct: 435 IEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLA 494
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY KCG + DA LFY +P V W T+IA +G +A+ LF +M++ ++P+ +
Sbjct: 495 DMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 554
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TF+ +L AC+H+G +++G F +M Y + P L HY CM DL GR G+L+ AL+F++S
Sbjct: 555 TFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKS 614
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MP++ DA IWG LL AC++H N+++G+ + LFE+EP +V ++N+YA G+W+GV
Sbjct: 615 MPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGV 674
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+R++ ++K PG S + ++ K F
Sbjct: 675 DEIRSITSGKGLRKTPGWSSMEVDNKVEVF 704
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 243/480 (50%), Gaps = 21/480 (4%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H +V S ++ + +V++Y + A FD + +RDV +WN MI G+ +
Sbjct: 70 AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGR 129
Query: 133 MGFLEKVL-CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G+ +V+ C M G+Q D+ T + +A ++++ +H + G DV
Sbjct: 130 AGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKA---CRNVTDGNKIHCLALKFGFMWDVY 186
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V + I Y + + A ++F E R + SWN++I G ++L +
Sbjct: 187 VAASLIHLYCRYGAVVNARILFD--EMPTRDMGSWNAMISGYCQSGNAKEALT-----LS 239
Query: 252 DGFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
DG R D TVVSLLS+C +G +HS+ I +G + ++ V N LI +Y++ G +
Sbjct: 240 DGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLK 299
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ +FD M R +SW ++I Y A+ LF M + PD +T++S+ S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILS 359
Query: 371 QSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q G + + + G +++ + NA++ MY+K G + AR +F LP K V+SW
Sbjct: 360 QLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWN 419
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL--DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
T+I+G A NG EA+++++ M E ++ N+ T+++VL AC+ AG L +G L
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG---MKLHG 476
Query: 488 KVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ + L+ + + +AD+ G+ G+L +AL +P + ++ W TL+ H + E
Sbjct: 477 RLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGE 535
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/625 (32%), Positives = 330/625 (52%), Gaps = 74/625 (11%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA-KLSDFLYSQMIHGHIV 81
N+ ++ + +N KA+ +++ M ++++ +N T+P + ++C+ +L++F + I H++
Sbjct: 95 NTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEF-DGKCIQDHVL 153
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F SD+++Q T+++MYA C L A K+FD D+ SWN+M+ G+ +G +E+
Sbjct: 154 KVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKD 213
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
++ M + +V N+ I +
Sbjct: 214 VYDRMP---------------------------------------ERNVIASNSMIVLFG 234
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K +++ A +F +++ + +VSW+++I + ++++L ++ M +G D V
Sbjct: 235 KKGNVEEACKLFNEMKQ--KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVV 292
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS----------------- 304
+S+LS+C ++ G+LVH + G + V++ N LI MYS
Sbjct: 293 LSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCC 352
Query: 305 --------------KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
KCG+I+ AR LFD M D+ VSW+AMISGYAQ+ E L LF M
Sbjct: 353 LDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM 412
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G PD ++S+IS C AL+ GKW Y GLK N+++ LI+MY K G +
Sbjct: 413 QIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCV 472
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
DA E+F L EK V +W +I G A+NG ++L F +M E + PN +TF+AVL AC
Sbjct: 473 EDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGAC 532
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
H G +++G +FN M + +++ P + HY CM DLLGR G LKEA + ++SMP+ D
Sbjct: 533 RHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVST 592
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
WG LL ACK + + E GE + +L EL P V ++NIYA G W V +R MM++
Sbjct: 593 WGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQ 652
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
+ V K PG S++ +G+ F D
Sbjct: 653 HGVVKTPGCSMIEAHGRVHEFLAGD 677
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL-----SDFLYS 73
++ WN+ I K+L F MK++ + PN +TF + AC + ++
Sbjct: 487 VSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFN 546
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMI 127
MI H + +I MVD+ + L A +L + MP DV++W A++
Sbjct: 547 SMIQEHKIG----PNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALL 597
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 206/594 (34%), Positives = 316/594 (53%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V + + A+ F M+ + N++T+ I CA F +HG ++
Sbjct: 214 WNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVI 273
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F D V T+V MY+KC L A KLF+ MP D +WN +I G+ Q GF ++
Sbjct: 274 GSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 333
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G++ D VT + + + L K VHS+ + V DV + + I Y
Sbjct: 334 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYF 393
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K D++MA +F+ + L V ++I G D++N +R +I +G P+ T+
Sbjct: 394 KGGDVEMARKIFQ--QNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTM 451
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C AL G+ +H + + V+V + + MY+KCG +D A F M +
Sbjct: 452 ASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSE 511
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ W +MIS ++Q G + A+ LF M +G D V++ S +S AL GK
Sbjct: 512 TDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEM 571
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y + V +ALIDMYSKCG + AR +F + K VSW ++IA +G
Sbjct: 572 HGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCA 631
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E LDLFH+M+ + P+ VTFL ++ AC HAG + +G YF+ MT+ Y + + HY+C
Sbjct: 632 RECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYAC 691
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DL GR G+L EA D ++SMP DAG+WGTLL AC++H N+E+ + + L EL+P +
Sbjct: 692 MVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKN 751
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++N++A G W V +R +MK V+K PG S + +NG T F+ +
Sbjct: 752 SGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAE 805
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 206/430 (47%), Gaps = 2/430 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR ALL + +M +++ P+ TFP++ KAC L++ ++H
Sbjct: 113 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTAR 172
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F D+FV + ++ +YA + A ++FD++P RD WN M+ G+ + G +
Sbjct: 173 SLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMG 232
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F MR + VT + L VH I G + D V NT ++ Y+
Sbjct: 233 TFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYS 292
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L A +F + + V+WN +I G D++ + MI G +PD T
Sbjct: 293 KCGNLFDARKLFNTMPQ--TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 350
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L S + +L + VHS+ + + DV + + LI +Y K GD++ AR +F
Sbjct: 351 ASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTL 410
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
TAMISGY G +A+ F + G VP+ +T+ S++ C AL+LGK
Sbjct: 411 VDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKEL 470
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L++ V V +A+ DMY+KCG + A E F + E + W +MI+ + NG+
Sbjct: 471 HCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKP 530
Query: 442 VEALDLFHQM 451
A+DLF QM
Sbjct: 531 EMAVDLFRQM 540
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 226/475 (47%), Gaps = 6/475 (1%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+AC+ S ++ +H I+ + + ++ +Y C R+ LF + +
Sbjct: 52 RACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNAL 111
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
WN MI G +G+ + L ++ M + D T + +A ++ L VH+
Sbjct: 112 PWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTA 171
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+G D+ V + I YA + A VF + + R + WN ++ G F++
Sbjct: 172 RSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQ--RDTILWNVMLHGYVKSGDFNN 229
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
++ + M + T +LS C G VH I GF+ D V NTL++
Sbjct: 230 AMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVA 289
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKCG++ AR LF+ M V+W +I+GY Q G DEA LF AM +AG PD VT
Sbjct: 290 MYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 349
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S + +SG+L K +Y + +V + +ALID+Y K G + AR++F
Sbjct: 350 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNT 409
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
V T MI+G L+G ++A++ F +++ + PN +T +VL AC L+ G
Sbjct: 410 LVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKE 469
Query: 482 -YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ +++ K Q+ +N S + D+ + G+L A +F + M ++D+ W +++
Sbjct: 470 LHCDILKK--QLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNSMI 521
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 4/279 (1%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T + SL +C + Q R VH+ I G ++ + ++ +Y CG I LF
Sbjct: 44 TTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFF 103
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
G+ + W MI G G D AL +F M + PD T +I CG + L
Sbjct: 104 GLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL 163
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
N A S G ++ V +ALI +Y+ G I DAR +F LP++ + W M+ G
Sbjct: 164 CMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVK 223
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPEL 496
+G+F A+ F M N VT+ +L C G G L+ ++ +P++
Sbjct: 224 SGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQV 283
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + + + G L +A +MP ++D W L+
Sbjct: 284 A--NTLVAMYSKCGNLFDARKLFNTMP-QTDTVTWNGLI 319
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/606 (32%), Positives = 325/606 (53%), Gaps = 3/606 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+++ + WNS I ++ +AL LF M+K + PN TF +AC S
Sbjct: 274 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 333
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
IH ++KS ++ ++FV ++ MYA+ ++ A +F M D D SWN+M+ G
Sbjct: 334 IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSG 393
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F Q G + L ++ MR G + D V V+ + A+ + + +H++ + G+D+D
Sbjct: 394 FVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSD 453
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V N+ + YAK +K + +F + + + VVSW +II G +L +R +
Sbjct: 454 LQVGNSLVDMYAKFCSMKYMDCIFDKMPD--KDVVSWTTIIAGHAQNGSHSRALELFREV 511
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G DV + S+L +C + + + +HS+ I G D+ + N ++ +Y +CG++
Sbjct: 512 QLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNV 570
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
D A +F+ + + VSWT+MIS Y G +EAL LF M+ G PD ++++S++S
Sbjct: 571 DYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAA 630
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
AL+ GK + G + + L+DMY++CG++ +R +F + K +V WT
Sbjct: 631 ASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWT 690
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+MI ++G A+DLF +M + + P+ + F+AVL AC+H+G + +G + M
Sbjct: 691 SMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 750
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
YQ+ P HY C+ DLLGR L+EA FV+ M ++ A +W LL AC+IH N E+GE
Sbjct: 751 YQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEI 810
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A +L E++P + YV ++N+YA RW V +R MK + +KK PG S + + K
Sbjct: 811 AAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVH 870
Query: 610 TFTVED 615
TF D
Sbjct: 871 TFMARD 876
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 270/526 (51%), Gaps = 8/526 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI WN+ I V E +L L+R M+ + I + TFP I KAC L D +H
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFL 136
G +K + S +FV ++V MY KC+ L+ A +LFD+MP++ DV SWN+MI ++ G
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 299
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L LF M+ + + T + QA + + +H+ + +V V N
Sbjct: 300 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 359
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I+ YA+ + A +F +++ +SWNS++ G + ++L FY M G +P
Sbjct: 360 IAMYARFGKMGEAANIFYNMDDW--DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP 417
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D+ V+S++++ + G +H++ + G D D+ V N+L+ MY+K + +F
Sbjct: 418 DLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIF 477
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M D+ VSWT +I+G+AQ G AL LF ++ G D++ + S++ C +
Sbjct: 478 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLIS 537
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
K +Y GL D V+ N ++D+Y +CG++ A +F + K VVSWT+MI+
Sbjct: 538 SVKEIHSYIIRKGLSDLVLQ-NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYV 596
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-LMTKVYQVNPE 495
NG EAL+LFH M E + P+ ++ +++L A L+KG L+ K + +
Sbjct: 597 HNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGS 656
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
L S + D+ R G L+++ + + K D +W +++ A +H
Sbjct: 657 LA--STLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMH 699
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 223/441 (50%), Gaps = 4/441 (0%)
Query: 33 NEAHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKS-PFWSDIF 90
NEA ++L LF + + + + + C Q +H H++ S ++ +F
Sbjct: 93 NEAFQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVF 151
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+ T +V MY KC L A KLFD MP + + +WNAMI + G L L+ MR+ G
Sbjct: 152 LSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSG 211
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
I D T + +A K VH I G + V V N+ + Y KCNDL A
Sbjct: 212 IPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 271
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
+F + E VVSWNS+I + + ++L + M P+ T V+ L +C
Sbjct: 272 QLFDRMPEK-EDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACED 330
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
+ QG +H+ + + ++V V N LI+MY++ G + A +F M D +SW +M
Sbjct: 331 SSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSM 390
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
+SG+ Q G EAL+ + M AG+ PDLV V+S+I+ +SG G YA GL
Sbjct: 391 LSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGL 450
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
++ V N+L+DMY+K S+ +F +P+K VVSWTT+IAG A NG AL+LF +
Sbjct: 451 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 510
Query: 451 MMELDLRPNRVTFLAVLQACT 471
+ + + + ++L AC+
Sbjct: 511 VQLEGIDLDVMMISSILLACS 531
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 8/229 (3%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ ++ + W S I V A++AL LF MK+ +EP++++ I A A LS
Sbjct: 575 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 634
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IHG +++ F + + +T+VDMYA+C L+ + +F+ + ++D+ W +MI
Sbjct: 635 ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMIN 694
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHI 184
+ G + LF M I D + + + A H+ ++ L+S+ + +
Sbjct: 695 AYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESM-KYEYQL 753
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ VC + + N L+ A +G+E T W +++G C
Sbjct: 754 EPWPEHYVC--LVDLLGRANHLEEAYQFVKGMEVE-PTAEVWCALLGAC 799
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 317/608 (52%), Gaps = 4/608 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
++ R WN + V + A+ LF M + + PN F + AC D
Sbjct: 158 FDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRD 217
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ +H +V++ + D+F +VDMY+K + A +F K+P DV SWNA I G
Sbjct: 218 LEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISG 277
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVD 187
G + L L M+ G+ + T+ + +A A + + +H F I D
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACAD 337
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+D + + YAK L A VF I + ++ WN++I GC++G +SL+ +
Sbjct: 338 SDDYIGVALVDMYAKYGLLDDARKVFEWIPR--KDLLLWNALISGCSHGGCHGESLSLFC 395
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M +G + TT+ ++L S EA+ VH+ GF D V+N LI Y KC
Sbjct: 396 RMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCN 455
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+ A +F+ +++T+MI+ +Q ++A++LF M G PD + S+++
Sbjct: 456 CLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLN 515
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C A E GK + +V NAL+ Y+KCGSI DA F LP+K VVS
Sbjct: 516 ACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVS 575
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W+ MI G A +G ALD+F +M++ + PN +T +VL AC HAG +++ GYF+ M
Sbjct: 576 WSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMK 635
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+++ ++ HYSCM DLLGR GKL +A++ V SMP +++A +WG LL A ++HR+ E+G
Sbjct: 636 EMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELG 695
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
+ A +LF LEP + +V +AN YA G WD VA +R +MK ++VKK P S V + +
Sbjct: 696 KLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDR 755
Query: 608 TCTFTVED 615
TF V D
Sbjct: 756 VHTFIVGD 763
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 204/420 (48%), Gaps = 10/420 (2%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P +++ P + + A S FL + IH H++KS + ++ Y+KC A ++
Sbjct: 4 PESIS-PLLTRYAATQSLFLGAH-IHAHLLKSGLLHAF--RNHLLSFYSKCRLPGSARRV 59
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
FD+ PD SW++++ ++ + L F MR G++ + + + + A A
Sbjct: 60 FDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDA--- 116
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
L VH+ + G+ D+ V N ++ Y + A VF R VSWN ++
Sbjct: 117 GLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARD-RNAVSWNGMMS 175
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
D+ D++ + M++ G RP+ ++++C L GR VH+ + G+D
Sbjct: 176 AFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDK 235
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
DV N L+ MYSK GDI A +F + VSW A ISG G AL L M+
Sbjct: 236 DVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMK 295
Query: 352 AAGEVPDLVTVLSMIS--GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
++G VP++ T+ S++ +GA LG+ + + + AL+DMY+K G
Sbjct: 296 SSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGL 355
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ DAR++F +P K ++ W +I+GC+ G E+L LF +M + NR T AVL++
Sbjct: 356 LDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKS 415
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 210/615 (34%), Positives = 319/615 (51%), Gaps = 24/615 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V N AL F+ M+K + + + + ++CA LS+ +H H +
Sbjct: 207 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 266
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F +D V+T +DMYAKCD + A LFD + + S+NAMI G++Q K L
Sbjct: 267 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 326
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ + G+ D +++ G+ +A K LS ++ I + DV V N I Y
Sbjct: 327 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 386
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + R VSWN+II K ++L + M+ PD T
Sbjct: 387 KCQALAEAFRVFDEMRR--RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 444
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +L G +HS + G + SV +LI MYSKCG I+ A +
Sbjct: 445 GSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 503
Query: 322 RTRVS--------------------WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
R VS W ++ISGY K ++A LF M G PD T
Sbjct: 504 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 563
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++ C + LGK L+ +V +C+ L+DMYSKCG + D+R +F
Sbjct: 564 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 623
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ V+W MI G A +G+ EA+ LF +M+ +++PN VTF+++L+AC H G ++KG
Sbjct: 624 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 683
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YF +M + Y ++P+L HYS M D+LG+ GK+K AL+ ++ MP ++D IW TLL C IH
Sbjct: 684 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 743
Query: 542 R-NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
R N+E+ E L L+P ++ Y ++N+YA G W+ V++LR M+ ++KK PG S
Sbjct: 744 RNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 803
Query: 601 LVHINGKTCTFTVED 615
V + + F V D
Sbjct: 804 WVELKDELHVFLVGD 818
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 256/558 (45%), Gaps = 35/558 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + E+ K++ +F M + IE + TF I K C+ L D IHG +V
Sbjct: 106 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 165
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D+ + ++DMYAK R + ++F +P+++ SW+A+I G Q L L
Sbjct: 166 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 225
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ V + ++ L L +H+ + AD V + YA
Sbjct: 226 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 285
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC++++ A+++F E R S+N++I G + + +L + ++ G D ++
Sbjct: 286 KCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +C + L +G ++ I LDV V N I MY KC + A +FD M
Sbjct: 344 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 403
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ + Q G E L LF +M + PD T S++ C G+L G
Sbjct: 404 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEI 462
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL---FYALP----------------- 421
+ G+ N V +LIDMYSKCG I +A ++ F+
Sbjct: 463 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 522
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ VSW ++I+G + + +A LF +MME+ + P++ T+ VL C A G G
Sbjct: 523 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLASAGLG 580
Query: 482 YFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCAC 538
+ +V + + + Y C + D+ + G L ++ L F +S+ + D W ++C
Sbjct: 581 K-QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL--RRDFVTWNAMICGY 637
Query: 539 KIHRNIEIGEYVAYRLFE 556
H E A +LFE
Sbjct: 638 AHHGKGE----EAIQLFE 651
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 199/420 (47%), Gaps = 6/420 (1%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P + + DF+ + M+ K P D+ M++ Y+K + + A
Sbjct: 39 PTTFVLNCLLQVYTNSRDFVSASMVFD---KMPL-RDVVSWNKMINGYSKSNDMFKANSF 94
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
F+ MP RDV SWN+M+ G+ Q G K + +F +M GI+ D T + + +
Sbjct: 95 FNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDT 154
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
SL +H + +G D DV + + YAK + VF+GI E + VSW++II
Sbjct: 155 SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE--KNSVSWSAIIA 212
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
GC + +L F++ M + S+L SC L G +H+H + F
Sbjct: 213 GCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAA 272
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
D V + MY+KC ++ A+ LFD + R S+ AMI+GY+Q+ +AL LF +
Sbjct: 273 DGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM 332
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
++G D +++ + C L G A L +V V NA IDMY KC ++
Sbjct: 333 SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA 392
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+A +F + + VSW +IA NG+ E L LF M+ + P+ TF ++L+ACT
Sbjct: 393 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 452
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 153/353 (43%), Gaps = 12/353 (3%)
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV N I+ Y+K ND+ A F + +R VVSWNS++ G + S+ +
Sbjct: 71 DVVSWNKMINGYSKSNDMFKANSFFNMMP--VRDVVSWNSMLSGYLQNGESLKSIEVFVD 128
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +G D T +L C E G +H + G D DV + L+ MY+K
Sbjct: 129 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 188
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ +F G+ ++ VSW+A+I+G Q L AL+ F M+ S++
Sbjct: 189 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 248
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C L LG +A + +V A +DMY+KC ++ DA+ LF S+
Sbjct: 249 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 308
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI G + +AL LFH++M L + ++ V +AC L +G + L K
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368
Query: 489 VYQVNPELNHYSCMA----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
L+ C+A D+ G+ L EA M + DA W ++ A
Sbjct: 369 -----SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD----LDVSVINTLIS 301
+ HMI GFRP + LL V +V FD DV N +I+
Sbjct: 29 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV--------FDKMPLRDVVSWNKMIN 80
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
YSK D+ A F+ M R VSW +M+SGY Q G+ +++ +F M G D T
Sbjct: 81 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 140
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++ C LG G +V+ +AL+DMY+K ++ +F +P
Sbjct: 141 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP 200
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EK VSW+ +IAGC N AL F +M +++ ++ + +VL++C L G
Sbjct: 201 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 258
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 33/201 (16%)
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNAL---------------------------- 400
C + GALELGK + G + V N L
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 401 ---IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
I+ YSK + A F +P + VVSW +M++G NGE ++++++F M +
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
+ TF +L+ C+ G ++ +V + ++ S + D+ + + E+L
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-GCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 518 FVQSMPIKSDAGIWGTLLCAC 538
Q +P K+ W ++ C
Sbjct: 195 VFQGIPEKNSVS-WSAIIAGC 214
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 220/651 (33%), Positives = 337/651 (51%), Gaps = 67/651 (10%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S++ WN IR A+ N + AL LFRRMK P++ TFPF+ KAC ++S+F I
Sbjct: 89 SSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASI 148
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---DVASWNAMIVGFAQM 133
HG +++ F S++FV ++ MY KC + A K+FD++ R D +WN+++ ++
Sbjct: 149 HGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHC 208
Query: 134 GFLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ LF M + GI D V V+ + + + VH F + G+ DV V
Sbjct: 209 FVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFV 268
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM--- 249
N + YAKC ++ A VF + + VV+WN+++ G + +F+D+L+ + M
Sbjct: 269 GNALVDMYAKCGKMEDANKVFERMR--FKDVVTWNAMVTGYSQNGRFEDALSLFGKMREE 326
Query: 250 -----------IYDGF---------------------RPDVTTVVSLLSSCVCPEALVQG 277
+ G+ RP+V T++SLLS+C AL+ G
Sbjct: 327 KIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHG 386
Query: 278 RLVHSH-------GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC--DRTRVSWT 328
+ H + G H D++VIN LI MY+KC ++ AR +FD +C DR V+WT
Sbjct: 387 KETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWT 446
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGE--VPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
MI GYAQ GD + AL+LF M VP+ T+ ++ C + AL+ GK Y
Sbjct: 447 VMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVL 506
Query: 387 SGGLKDN--VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
D+ + V N LIDMYSK G + A+ +F ++ ++ VSWT+++ G ++G +A
Sbjct: 507 RRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDA 566
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
+F +M + L + +TFL VL AC+H+G + V+P + HY+CM D
Sbjct: 567 FRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVD 613
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
LLGR G+L EA+ + MPI+ +W LL AC+IH N E+ E+ A +L EL+ +
Sbjct: 614 LLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGT 673
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y ++NIYA RW VA + +MKR +KK PG S V TF V D
Sbjct: 674 YTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGD 724
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 151/291 (51%), Gaps = 12/291 (4%)
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
T+IS+ + N + + E + + +V WN +I + + + +L +R M +
Sbjct: 66 TYISSNSITNAILLLE---KNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHW 122
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T + +C G +H I GF+ +V V N +ISMY KC + AR
Sbjct: 123 TPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARK 182
Query: 315 LFDGMCDR---TRVSWTAMISGYAQKGDLDEALRLFFAMEAA-GEVPDLVTVLSMISGCG 370
+FD +C R V+W +++S Y+ + A+ LF M G +PD V V++++ CG
Sbjct: 183 VFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCG 242
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G G+ + GL ++V V NAL+DMY+KCG + DA ++F + K VV+W
Sbjct: 243 YLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNA 302
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
M+ G + NG F +AL LF +M E + + VT+ +V+ +G+ ++G+G
Sbjct: 303 MVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVI-----SGYAQRGFG 348
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 30/346 (8%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
A SL ++ + S + W+S I + +A+ +FR+M PN +T +
Sbjct: 316 ALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLS 375
Query: 63 ACAKLSDFLYSQMIHGHIVK-------SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
ACA + L+ + H + VK + D+ V ++DMYAKC L+ A +FD++
Sbjct: 376 ACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEI 435
Query: 116 --PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIHAKH 170
DRDV +W MI G+AQ G L LF M + + DF T+ + A
Sbjct: 436 CPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDF-TISCVLMACARLAA 494
Query: 171 LSLLKSVHSFGIHIG-VDADV-SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L K +H++ + +D+DV V N I Y+K D+ A++VF + + R VSW S
Sbjct: 495 LKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK--RNAVSWTS 552
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
++ G + +D+ + M + D T + +L +C HS G+ +G
Sbjct: 553 LLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYAC-----------SHS-GMDFG 600
Query: 289 FDLDVSVINTLISMYSKCGDIDSA-RFLFDGMCDRTRVSWTAMISG 333
D V ++ + + G + A R + D + T V W A++S
Sbjct: 601 VDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSA 646
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/595 (34%), Positives = 318/595 (53%), Gaps = 4/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + +AL L+ RM ++P+ TFP + + C + + + + IH H+
Sbjct: 174 SWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHV 233
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++ F SD+ V ++ MY KC ++ A +FDKMP+RD SWNAMI G+ + G + L
Sbjct: 234 IRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGL 293
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M + D +T+ + A L + +H + + D S+ N+ I Y
Sbjct: 294 RLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMY 353
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+ ++ AE VF E R +VSW ++I G +L Y+ M +G PD T
Sbjct: 354 SSVGLIEEAETVFSRTE--CRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEIT 411
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +LS+C C L G +H G V N+LI MY+KC ID A +F
Sbjct: 412 IAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTL 471
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ VSWT++I G EAL FF P+ VT++ ++S C + GAL GK
Sbjct: 472 EKNIVSWTSIILGLRINNRCFEAL-FFFREMIRRLKPNSVTLVCVLSACARIGALTCGKE 530
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+A G+ + + NA++DMY +CG + A + F+++ + V SW ++ G A G+
Sbjct: 531 IHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGK 589
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
A +LF +M+E ++ PN VTF+++L AC+ +G + +G YFN M Y + P L HY+
Sbjct: 590 GAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYA 649
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR GKL+EA +F+Q MP+K D +WG LL +C+IH ++E+GE A +F+ +
Sbjct: 650 CVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTT 709
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
S Y+ ++N+YA G+WD VA +R MM++N + PG S V + G F D
Sbjct: 710 SVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSD 764
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 202/387 (52%), Gaps = 3/387 (0%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
++ M+ + L A+ +F +M R++ SWN ++ G+A+ G ++ L L++ M VG++
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T + + +L + +H I G ++DV V N I+ Y KC D+ A LV
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + R +SWN++I G + L + MI PD+ T+ S++++C
Sbjct: 265 FDKMPN--RDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
GR +H + + F D S+ N+LI MYS G I+ A +F R VSWTAMIS
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY +AL + MEA G +PD +T+ ++S C L++G A GL
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVS 442
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+V N+LIDMY+KC I A E+F++ EK +VSWT++I G +N EAL F +M+
Sbjct: 443 YSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMI 502
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKG 479
L+PN VT + VL AC G L G
Sbjct: 503 R-RLKPNSVTLVCVLSACARIGALTCG 528
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 110/213 (51%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V+L+ C A +G V+S+ L + + N L+SM+ + G++ A ++F M
Sbjct: 110 VALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEK 169
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R SW ++ GYA+ G DEAL L+ M G PD+ T ++ CG L G+
Sbjct: 170 RNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREI 229
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G + +V V NALI MY KCG + AR +F +P + +SW MI+G NG
Sbjct: 230 HVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVC 289
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+E L LF M++ + P+ +T +V+ AC G
Sbjct: 290 LEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN + ++ + A LF+RM ++++ PN +TF I AC++ S + + +
Sbjct: 574 VTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSR-SGMVAEGLEYF 632
Query: 79 HIVKSPF--WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMI 127
+ +K + ++ +VD+ + +L+ AY+ KMP + D A W A++
Sbjct: 633 NSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALL 684
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/606 (31%), Positives = 326/606 (53%), Gaps = 3/606 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+++ + WNS I ++ +AL LF M+K + PN TF +AC S
Sbjct: 238 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 297
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
IH ++KS ++ ++FV ++ MYA+ ++ A +F M D D SWN+M+ G
Sbjct: 298 IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSG 357
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F Q G + L ++ MR G + D V V+ + A+ + + +H++ + G+D+D
Sbjct: 358 FVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSD 417
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V N+ + YAK +K + +F + + + VVSW +II G +L +R +
Sbjct: 418 LQVGNSLVDMYAKFCSMKYMDCIFDKMPD--KDVVSWTTIIAGHAQNGSHSRALELFREV 475
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G DV + S+L +C + + + +HS+ I G D+ + N ++ +Y +CG++
Sbjct: 476 QLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNV 534
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
D A +F+ + + VSWT+MIS Y G +EAL LF M+ G PD ++++S++S
Sbjct: 535 DYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAA 594
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
AL+ GK + G + + L+DMY++CG++ +R +F + K +V WT
Sbjct: 595 ASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWT 654
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+MI ++G A+DLF +M + + P+ + F+AVL AC+H+G + +G + M
Sbjct: 655 SMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 714
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
YQ+ P HY+C+ DLLGR L+EA FV+ M ++ A +W LL AC+IH N E+GE
Sbjct: 715 YQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEI 774
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A +L E++P + YV ++N+Y+ RW V +R MK + +KK PG S + + K
Sbjct: 775 AAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVH 834
Query: 610 TFTVED 615
TF D
Sbjct: 835 TFMARD 840
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 271/526 (51%), Gaps = 8/526 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI WN+ I V E +L L+R M+ + I + TFP I KAC L D Y +H
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVH 203
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFL 136
G +K + S +FV ++V MY KC+ L+ A +LFD+MP++ DV SWN+MI ++ G
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 263
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L LF M+ + + T + QA + + +H+ + +V V N
Sbjct: 264 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 323
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I+ YA+ + A +F +++ +SWNS++ G + ++L FY M G +P
Sbjct: 324 IAMYARFGKMGEAANIFYNMDDW--DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP 381
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D+ V+S++++ + G +H++ + G D D+ V N+L+ MY+K + +F
Sbjct: 382 DLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIF 441
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M D+ VSWT +I+G+AQ G AL LF ++ G D++ + S++ C +
Sbjct: 442 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLIS 501
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
K +Y GL D V+ N ++D+Y +CG++ A +F + K VVSWT+MI+
Sbjct: 502 SVKEIHSYIIRKGLSDLVLQ-NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYV 560
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-LMTKVYQVNPE 495
NG EAL+LFH M E + P+ ++ +++L A L+KG L+ K + +
Sbjct: 561 HNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGS 620
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
L S + D+ R G L+++ + + K D +W +++ A +H
Sbjct: 621 LA--STLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMH 663
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 223/441 (50%), Gaps = 4/441 (0%)
Query: 33 NEAHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKS-PFWSDIF 90
NEA ++L LF + + + + + C Q +H H++ S ++ +F
Sbjct: 57 NEAFQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVF 115
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+ T +V MY KC L A KLFD MP + + +WNAMI + G L L+ MR+ G
Sbjct: 116 LSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSG 175
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
I D T + +A K VH I G + V V N+ + Y KCNDL A
Sbjct: 176 IPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 235
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
+F + E VVSWNS+I + + ++L + M P+ T V+ L +C
Sbjct: 236 QLFDRMPEK-EDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACED 294
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
+ QG +H+ + + ++V V N LI+MY++ G + A +F M D +SW +M
Sbjct: 295 SSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSM 354
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
+SG+ Q G EAL+ + M AG+ PDLV V+S+I+ +SG G YA GL
Sbjct: 355 LSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGL 414
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
++ V N+L+DMY+K S+ +F +P+K VVSWTT+IAG A NG AL+LF +
Sbjct: 415 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 474
Query: 451 MMELDLRPNRVTFLAVLQACT 471
+ + + + ++L AC+
Sbjct: 475 VQLEGIDLDVMMISSILLACS 495
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 14/232 (6%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ ++ + W S I V A++AL LF MK+ +EP++++ I A A LS
Sbjct: 539 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 598
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IHG +++ F + + +T+VDMYA+C L+ + +F+ + ++D+ W +MI
Sbjct: 599 ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMIN 658
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ G + LF M I D + + + A H+ L+ F + +
Sbjct: 659 AYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS---GLMNEGRRFLESMKYEY 715
Query: 189 DVSVCNTWISAYA-------KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ W YA + N L+ A +G+E T W +++G C
Sbjct: 716 QL---EPWPEHYACLVDLLGRANHLEEAYQFVKGMEVE-PTAEVWCALLGAC 763
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/613 (33%), Positives = 324/613 (52%), Gaps = 31/613 (5%)
Query: 26 IREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPF 85
++ + +AL + + M +N I P++ T+ + + C ++++H H++++ F
Sbjct: 36 VKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQF 95
Query: 86 W-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFY 144
DI + +V +Y K L A ++FD+MP ++V SW AMI +A+ ++ L FY
Sbjct: 96 ECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFY 155
Query: 145 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
M+ VGIQ + T + A L +L H + G +++V V N + YAK
Sbjct: 156 EMQDVGIQPNHFTFASILPACTD---LEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRG 212
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM----------IYDGF 254
++ A +F + + R VVSWN++I G +D+L ++ + + G+
Sbjct: 213 CIEFARELFDKMPQ--RDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGY 270
Query: 255 RP--DVTTVVSLL-----SSCVCPEALVQGRLVHSHGIHYGFDL-------DVSVINTLI 300
DV V L + V ++ G V + + F L +V N +I
Sbjct: 271 AQCGDVENAVELFEKMPEQNLVSWNTMIAG-YVQNGSVKEAFKLFQIMPERNVISWNAVI 329
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
S +++ G ++ A LF M + VSW AMI+GY+Q G + AL+LF M+ P+
Sbjct: 330 SGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTE 389
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T ++ C LE G G + +V+V N L+ MY+KCGSI DAR++F +
Sbjct: 390 TFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRM 449
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
++ S + MI G A+NG E+L+LF QM L+P+RVTF+ VL AC HAG +++G
Sbjct: 450 RQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGR 509
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
YF++MT+ Y + P + HY CM DLLGR G EA D + MPIK DA +WG+LL AC+
Sbjct: 510 QYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRT 569
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H NI++GE VA L L P + APYV ++NIYA GRWD + ++R MK +VKK G S
Sbjct: 570 HNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCS 629
Query: 601 LVHINGKTCTFTV 613
+ I + F V
Sbjct: 630 WIVIKKQVHAFLV 642
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 211/441 (47%), Gaps = 34/441 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I +AL F M+ I+PN+ TF I AC +D H IV
Sbjct: 134 WTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPAC---TDLEVLGEFHDEIV 190
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S++FV +VDMYAK ++ A +LFDKMP RDV SWNAMI G+ Q G +E L
Sbjct: 191 KGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALK 250
Query: 142 LF----------YNMRLVGIQ--ADFVTVMGL-------------TQAAIHAKHLSLLKS 176
LF +N + G D + L T A + ++ S+ ++
Sbjct: 251 LFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEA 310
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
F I + +V N IS +A+ ++ A +F+ + E VVSWN++I G +
Sbjct: 311 FKLF--QIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPEC--NVVSWNAMIAGYSQN 366
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ +++L + M +P+ T +L +C L QG H I GF DV V
Sbjct: 367 GQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVG 426
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
NTL+ MY+KCG I+ AR +FD M + S +AMI GYA G E+L LF M+ G
Sbjct: 427 NTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLK 486
Query: 357 PDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
PD VT + ++S C +G ++ G+ +FD + + +ID+ + G +A +
Sbjct: 487 PDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEAND 546
Query: 416 LFYALPEKTVVS-WTTMIAGC 435
L +P K W ++++ C
Sbjct: 547 LINKMPIKPDADMWGSLLSAC 567
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 89/160 (55%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+L K + WN+ I +A AL LF +M+ D++PN TF + ACA L+
Sbjct: 343 KLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALA 402
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
H +++S F SD+ V T+V MYAKC ++ A K+FD+M +D AS +AMIV
Sbjct: 403 VLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIV 462
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G+A G ++ L LF M+ G++ D VT +G+ A HA
Sbjct: 463 GYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHA 502
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 33/261 (12%)
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
++ ++G L EAL + M G P T S++ GC + +L K +
Sbjct: 34 GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93
Query: 389 GLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
+ ++ + N L+ +Y K GS+ +AR +F +P K VVSWT MIA A + EAL
Sbjct: 94 QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGF 153
Query: 448 FHQMMELDLRPNRVTFLAVLQACT--------HAGFLEKGW-----------------GY 482
F++M ++ ++PN TF ++L ACT H ++ G+ G
Sbjct: 154 FYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGC 213
Query: 483 FNLMTKVYQVNPELNHYSCMADLLG--RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
+++ P+ + S A + G + G +++AL Q +P K D W T++
Sbjct: 214 IEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP-KRDVITWNTMMAGYAQ 272
Query: 541 HRNIEIGEYVAYRLFELEPHS 561
++E A LFE P
Sbjct: 273 CGDVE----NAVELFEKMPEQ 289
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 312/584 (53%), Gaps = 6/584 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
+N I+ + K + +A+ +F M D P+N T+PF+ KAC++L Y +++HG
Sbjct: 89 YNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLT 148
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ S F S +FV +++ MY C ++ A K+FD M ++ V SWN MI G+ + GF L
Sbjct: 149 LVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTAL 208
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M G++ D +V+ + A + K L + + VH + V V N + Y
Sbjct: 209 VVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMY 267
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC + A LVF + E R VVSW S+I G +L+ ++ M +G RP+ T
Sbjct: 268 AKCGSMDEARLVFDNMVE--RDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVT 325
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +L +C L GR +H + +V+V +LI MY+KC + + +F
Sbjct: 326 IALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTS 385
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ V W A++SG EA+ LF M G + T S++ G L+
Sbjct: 386 RKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNN 445
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--KTVVSWTTMIAGCALN 438
++Y G N+ V +LID+YSKCGS+ A ++F +P + + W+ +IAG ++
Sbjct: 446 INSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMH 505
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G A+ LF QM++ ++PN VTF +VLQ+C+HAG ++ G F M K +Q P +H
Sbjct: 506 GHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDH 565
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM DLLGR G++ EA D +++MP +WG LL AC +H N+E+GE A LFELE
Sbjct: 566 YTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELE 625
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
P + YV +A +YA GRW+ N+R M ++K P SL+
Sbjct: 626 PGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 669
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 234/510 (45%), Gaps = 31/510 (6%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+ P + + K ++ +H H++ S S I +++ +V YA C + A
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNAR 75
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ---ADFVTVMGLTQAAI 166
KLFD++ R +N MI + G + + +F + ++G + D T + +A
Sbjct: 76 KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVF--LEMLGSKDCCPDNYTYPFVIKACS 133
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
+ + +H + + + V N+ ++ Y C +++ A VF ++E ++VVSW
Sbjct: 134 ELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKE--KSVVSW 191
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N++I G + +L + M+ G D +VVS+L +C + L GR V HG+
Sbjct: 192 NTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRV--HGLV 249
Query: 287 YGFDLDVSVI-NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
L ++ N L+ MY+KCG +D AR +FD M +R VSWT+MI+GY GD AL
Sbjct: 250 EEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALS 309
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LF M+ G P+ VT+ ++ C L+ G+ + L V V +LIDMY+
Sbjct: 310 LFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYA 369
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KC +G + +F K V W +++GC N EA+ LF +M+ + N T +
Sbjct: 370 KCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNS 429
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY---------SCMADLLGRKGKLKEAL 516
+L A +G + V +N L + + D+ + G L+ A
Sbjct: 430 LLPA----------YGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAH 479
Query: 517 DFVQSMPIK-SDAGIWGTLLCACKIHRNIE 545
++P+ D +W ++ +H + E
Sbjct: 480 KIFNTIPVDVQDIFVWSIIIAGYGMHGHGE 509
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 212/432 (49%), Gaps = 15/432 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ ++ WN+ I A+ AL++F +M + +E + + + AC L + +
Sbjct: 184 KEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGR 243
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG +V+ V +VDMYAKC +D A +FD M +RDV SW +MI G+ G
Sbjct: 244 RVHG-LVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNG 302
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L LF M++ G++ + VT+ + A +L + +H + + + ++V+V
Sbjct: 303 DAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVET 362
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I YAKCN L ++ VF + V WN+++ GC + +++ ++ M+ +G
Sbjct: 363 SLIDMYAKCNCLGLSFSVFTRTSR--KKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGV 420
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+ T SLL + L ++S+ + GF ++ V +LI +YSKCG ++SA
Sbjct: 421 EINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHK 480
Query: 315 LFDGMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F+ + + W+ +I+GY G + A+ LF M +G P+ VT S++ C +
Sbjct: 481 IFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHA 540
Query: 373 GALELGKWFDNYACSGGLKDNVMVCN-----ALIDMYSKCGSIGDARELFYALP-EKTVV 426
G ++ G + + LKD+ + N ++D+ + G + +A +L +P
Sbjct: 541 GMVDDGLYLFKFM----LKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHA 596
Query: 427 SWTTMIAGCALN 438
W ++ C ++
Sbjct: 597 VWGALLGACVMH 608
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/531 (37%), Positives = 296/531 (55%), Gaps = 6/531 (1%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
++F ++ YAK R A++LFD++P+ D+ S+N +I +A G L LF MR
Sbjct: 73 NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+G+ D T+ + A + L+ +HS + G D+ VSV N ++ Y K DL
Sbjct: 133 EMGLDMDXFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF G+ G+R VSWNS+I + +L ++ M+ G D+ T+ S+L++
Sbjct: 191 DAKRVFYGMG-GIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRVS 326
C E L G H I GF + V + LI +YSKCG + R +F+ + + V
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 327 WTAMISGYAQKGD-LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W M+SGY+Q + L++AL F M+ G P+ + + +IS C + GK + A
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369
Query: 386 CSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
+ N + V NALI MYSKCG++ DAR LF + E VS +MIAG A +G +E+
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L LF M+E + P +TF++VL AC H G +E+GW YFN+M + + + PE HYSCM D
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
LLGR GKL EA + + MP + W +LL AC+ H NIE+ A ++ +LEP +AAP
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N+YA GRW+ VA +R M+ VKK PG S + + + F ED
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAED 600
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 160/348 (45%), Gaps = 12/348 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I E KAL LF+ M + + + T + A L D HG ++
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLI 267
Query: 82 KSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMPDRDVASWNAMIVGFAQ-MGFLEK 138
K+ F + V + ++D+Y+KC DC K+F+++ + D+ WN M+ G++Q FLE
Sbjct: 268 KTGFHQNSHVGSGLIDLYSKCGGGMSDCR-KVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 197
L F M+ +G + + + + + A + S K +HS + + ++ +SV N I
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y+KC +L+ A +F + E VS NS+I G +SL+ ++ M+ P
Sbjct: 387 AMYSKCGNLQDARRLFDRMAE--HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPT 444
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T +S+LS+C + +G + + + + + +I + + G + A L
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 317 DGMC-DRTRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGEVPDLV 360
M + + W +++ G+++ A++ +E + P +V
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVV 552
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 296/542 (54%), Gaps = 23/542 (4%)
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+L++ M+ + F I + MV+ + R + A +LFDK+ DRDV SWN+MI G
Sbjct: 166 YLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISG 225
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G E+ L ++ M +GI D T++ + ++ LSL K+VHS I +
Sbjct: 226 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR 285
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
++ NT + Y+KC DL A VF + G R VVSW S+I G T D ++ + M
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKM--GERNVVSWTSMIAGYTRDGWSDGAIILLQQM 343
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G + DV + S+L +C +L G+ VH + ++ V N L+ MY+KCG +
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSM 403
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ A +F M + +SW M+ G+L PD T+ ++ C
Sbjct: 404 EGANSVFSTMVVKDIISWNTMV------GELK---------------PDSRTMACILPAC 442
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MIAG ++G EA+ F++M + + P+ V+F+++L AC+H+G LE+GW +F +M
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKND 562
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P+L HY+CM DLL R G L +A F++++PI DA IWG LLC C+I+ +IE+ E
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEK 622
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA R+FELEP + YV +ANIYA + + V +R + + ++K PG S + I G+
Sbjct: 623 VAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVN 682
Query: 610 TF 611
F
Sbjct: 683 LF 684
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 225/492 (45%), Gaps = 46/492 (9%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I V + L ++++M I+ + T + CA + +H
Sbjct: 218 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS F I T++DMY+KC LD A ++F+KM +R+V SW +MI G+ + G+ + +
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 337
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M G++ D V + + A + L K VH + + +++ VCN + Y
Sbjct: 338 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 397
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC ++ A VF + ++ ++SWN+++G +PD T
Sbjct: 398 AKCGSMEGANSVFSTMV--VKDIISWNTMVG---------------------ELKPDSRT 434
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +L +C AL +G+ +H + + G+ D V N L+ +Y KCG + AR LFD +
Sbjct: 435 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ VSWT MI+GY G +EA+ F M AG PD V+ +S++ C SG LE G +
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+F ++ + ++D+ S+ G++ A + LP W ++ GC +
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 614
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
+ A + ++ EL+ + GY+ L+ +Y +
Sbjct: 615 HDIELAEKVAERVFELE---------------------PENTGYYVLLANIYAEAEKREE 653
Query: 499 YSCMADLLGRKG 510
M + +G+KG
Sbjct: 654 VKRMREKIGKKG 665
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 210/478 (43%), Gaps = 85/478 (17%)
Query: 54 NLTFPFIAKACAKLSDFLYSQ---MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
NL F + + +F SQ IH +K+ F+S IF V + A R
Sbjct: 7 NLCFSPLTLNQNRKENFFSSQNGCFIHKPSLKTTFFSPIFRSCIPVRISATPTR------ 60
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
D V +NA I+ F Q+G LE + L + ++ T + Q K
Sbjct: 61 ----TIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKS 114
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG--------------- 215
L+ K VHS V D ++ +S YA C DLK VF
Sbjct: 115 LTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSE 174
Query: 216 -----------------IEEGL-----------------RTVVSWNSIIGGCTYGDKFDD 241
+E+G+ R V+SWNS+I G +
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTER 234
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
L Y+ M+Y G D+ T++S+L C L G+ VHS I F+ ++ NTL+
Sbjct: 235 GLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 294
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKCGD+D A +F+ M +R VSWT+MI+GY + G D A+ L ME G D+V
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVA 354
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ S++ C +SG+L+ GK +Y + + N+ VCNAL+DMY+KCGS+ A +F +
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMV 414
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
K ++SW TM+ +L+P+ T +L AC LE+G
Sbjct: 415 VKDIISWNTMVG---------------------ELKPDSRTMACILPACASLSALERG 451
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 331/621 (53%), Gaps = 68/621 (10%)
Query: 7 PPRLNKIYRSSTINQ----WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
PP + +ST+N + S +R + K +L++ +M+ + P+ +P + K
Sbjct: 49 PPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIK 108
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDV 120
+ H H++K SD FV+ ++DMYA+ + A K+FD++PD R V
Sbjct: 109 SAGT-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKV 163
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
A WNAM+ G+ + + LF M
Sbjct: 164 ADWNAMVSGYWKWESEGQAQWLFDVM---------------------------------- 189
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ +V ++ YAK DL+ A F + E R+VVSWN+++ G +
Sbjct: 190 -----PERNVITWTAMVTGYAKVKDLEAARRYFDCMPE--RSVVSWNAMLSGYAQNGLAE 242
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCV-----CPEALVQGRLVHSHGIHYGFDLDVSV 295
++L + M+ G PD TT V+++S+C C A + R +H I L+ V
Sbjct: 243 EALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLV-RTLHQKRIQ----LNCFV 297
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
L+ MY+K GD+DSAR LF+ M R V+W +MI+GYAQ G A+ LF M A +
Sbjct: 298 RTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 357
Query: 356 V-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+ PD VT++S+IS CG GALELG W + +K ++ NA+I MYS+CGS+ DA+
Sbjct: 358 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 417
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F + + VVS+ T+I+G A +G VEA++L M E + P+RVTF+ VL AC+HAG
Sbjct: 418 RVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG 477
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
LE+G F + +P ++HY+CM DLLGR G+L++A ++ MP++ AG++G+L
Sbjct: 478 LLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSL 532
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L A +IH+ +E+GE A +LFELEP ++ ++ ++NIYA GRW V +R MK+ VK
Sbjct: 533 LNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVK 592
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K G S V GK F V D
Sbjct: 593 KTTGWSWVEYGGKLHKFIVAD 613
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 218/477 (45%), Gaps = 61/477 (12%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDC----AYKLFDKMPDRDVASWNAM 126
L++Q+IH + +W + + C RL + LF+ + +V + +M
Sbjct: 20 LHAQIIHNSLHHHNYWVALLIN--------HCTRLRAPPHYTHLLFNSTLNPNVFVFTSM 71
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
+ ++ + KV+ ++ M+ G++ D FV + + A H+ + +G
Sbjct: 72 LRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI------GFHAHVLKLG 125
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+D V N I YA+ + A VF I + R V WN+++ G + +
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQA--- 182
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
++D V PE +V +++ Y+K
Sbjct: 183 --QWLFD----------------VMPER------------------NVITWTAMVTGYAK 206
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
D+++AR FD M +R+ VSW AM+SGYAQ G +EALRLF M AG PD T +++
Sbjct: 207 VKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTV 266
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
IS C G L ++ N V AL+DMY+K G + AR+LF +P + V
Sbjct: 267 ISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNV 326
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
V+W +MIAG A NG+ A++LF +M+ L P+ VT ++V+ AC H G LE G
Sbjct: 327 VTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVR 386
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+T+ Q+ ++ ++ M + R G +++A Q M + D + TL+ H
Sbjct: 387 FLTE-NQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLISGFAAH 441
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/614 (32%), Positives = 334/614 (54%), Gaps = 12/614 (1%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
P L + I WN+ I D + KAL LF +M ++++ + +T +ACA+L
Sbjct: 209 PLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAEL 268
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ IH +K F D+++ +++MY+ L+ +++LF+ +P+RD WN+MI
Sbjct: 269 GSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMI 328
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTV-MGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+A G E+ + LF M+ G++ D TV + L+ A L KS+H+ I G+
Sbjct: 329 SAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGM 388
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVF---RGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
D S+ N +S Y + N ++ + +F +G++ ++SWN++I +
Sbjct: 389 RIDASLGNALLSMYTELNCVESVQKIFDRMKGVD-----IISWNTMILALARNTLRAQAC 443
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ M +P+ T++S+L++C L GR +H + + + +++ + L MY
Sbjct: 444 ELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMY 503
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
CGD +AR LF+G DR +SW AMI+ Y + +AL LF M + E P+ VT++
Sbjct: 504 MNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAE-PNSVTII 562
Query: 364 SMISGCGQSGALELGKWFDNYACSGG--LKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++S L G+ Y G L ++ + NA I MY++CGS+ A +F LP
Sbjct: 563 NVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ ++SW MIAG +NG +A+ F QM+E RPN VTF++VL AC+H+GF+E G
Sbjct: 623 KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 682
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
F+ M + + V PEL HYSC+ DLL R G + EA +F+ SMPI+ DA +W LL +C+ +
Sbjct: 683 LFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAY 742
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+ + + + +L +LEP +A YV ++N+YA G W V +RT +K ++K PG S
Sbjct: 743 SDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISW 802
Query: 602 VHINGKTCTFTVED 615
+ + + F+ D
Sbjct: 803 IIVKNQVHCFSAGD 816
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 273/549 (49%), Gaps = 18/549 (3%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I+ + L + +M+ + PNN T P + KACA + + IH I
Sbjct: 20 HWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSI 79
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ D+ V T +VD Y KC ++ A +FD M DRDV WNAM+ G+ G E+ +
Sbjct: 80 QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAM 139
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISA 199
L M ++ + T++ L A A L L + VH + + G+ D++ V I
Sbjct: 140 LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGF 199
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y + D+++ L+F + +R +VSWN++I G GD F +L + M+ D + D
Sbjct: 200 YLRF-DMRVLPLLFDLMV--VRNIVSWNAMISGYYDVGDYF-KALELFVQMLVDEVKFDC 255
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T++ + +C +L G+ +H I + F D+ ++N L++MYS G ++S+ LF+
Sbjct: 256 VTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFES 315
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ--SGALE 376
+ +R W +MIS YA G +EA+ LF M++ G D TV+ M+S C + SG L+
Sbjct: 316 VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK 375
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK + G++ + + NAL+ MY++ + +++F + ++SW TMI A
Sbjct: 376 -GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALA 434
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---WGYFNLMTKVYQVN 493
N +A +LF +M E +++PN T +++L AC L+ G GY +M ++N
Sbjct: 435 RNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGY--VMKHSIEIN 492
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
L + +AD+ G A D + P + D W ++ + + + +R
Sbjct: 493 QPLR--TALADMYMNCGDEATARDLFEGCPDR-DLISWNAMIASYVKNNQAHKALLLFHR 549
Query: 554 LF-ELEPHS 561
+ E EP+S
Sbjct: 550 MISEAEPNS 558
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/600 (33%), Positives = 321/600 (53%), Gaps = 12/600 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + + A++++ +M ++ P+ LTF I KAC D + +HGH++
Sbjct: 226 WTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVI 285
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + + Q ++ MY + ++ A +F + +D+ SW +MI GF Q+G+ + L
Sbjct: 286 KSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 345
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVH----SFGIHIGVDADVSVCNTW 196
LF +M G + G +A + + +H FG+ V A S+C+
Sbjct: 346 LFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDM- 404
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
YAK L A F IE +VSWN+II + ++++ F+ M++ G P
Sbjct: 405 ---YAKFGFLPSAIRAFYQIES--PDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMP 459
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T +SLL +C P + QG +HS+ I G D + +V N+L++MY+KC ++ A +F
Sbjct: 460 DGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVF 519
Query: 317 DGMCDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ + VSW A++S Q E RLF M + PD +T+ +++ C + +L
Sbjct: 520 KDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASL 579
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E+G ++ GL +V V N LIDMY+KCGS+ AR++F + +VSW+++I G
Sbjct: 580 EVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGY 639
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A G EAL+LF M L ++PN VT+L VL AC+H G +E+GW ++N M + P
Sbjct: 640 AQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPT 699
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
H SCM DLL R G L EA +F++ M D +W TLL +CK H N++I E A +
Sbjct: 700 REHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENIL 759
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+L+P ++A V ++NI+A G W VA LR +MK+ V+K PGQS + + + F ED
Sbjct: 760 KLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSED 819
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 235/511 (45%), Gaps = 14/511 (2%)
Query: 27 REAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFW 86
REA+D H K + I+ + T+ + AC + Y + IH HI+KS
Sbjct: 138 REALDTFNFHP--------KNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQ 189
Query: 87 SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM 146
D+ +Q +++MY KC L A K FD M R+V SW MI G++Q G + ++ M
Sbjct: 190 PDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQM 249
Query: 147 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
G D +T + +A A + L + +H I G D + N IS Y + +
Sbjct: 250 LQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQI 309
Query: 207 KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLL 265
A VF I + ++SW S+I G T ++L +R M GF +P+ S+
Sbjct: 310 VHASDVFTMIST--KDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVF 367
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
S+C GR +H +G +V +L MY+K G + SA F + V
Sbjct: 368 SACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLV 427
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SW A+I+ ++ GD++EA+ F M G +PD +T LS++ CG + G +Y
Sbjct: 428 SWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYI 487
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEA 444
GL VCN+L+ MY+KC ++ DA +F + E +VSW +++ C + + E
Sbjct: 488 IKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEV 547
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
LF M+ + +P+ +T +L C LE G K V +++ + + D
Sbjct: 548 FRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLV-VDVSVSNRLID 606
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + G LK A D S D W +L+
Sbjct: 607 MYAKCGSLKHARDVFGSTQ-NPDIVSWSSLI 636
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 213/456 (46%), Gaps = 8/456 (1%)
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D + C + K R++++ + + + Q + E + ++ + IQ + T L
Sbjct: 105 DEIPCQFVCLIKQHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLI 164
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
A + L K +H + D+ + N ++ Y KC LK A F ++ LR
Sbjct: 165 LACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ--LRN 222
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VVSW +I G + + +D++ Y M+ G+ PD T S++ +C + GR +H
Sbjct: 223 VVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHG 282
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
H I G+D + N LISMY++ G I A +F + + +SW +MI+G+ Q G E
Sbjct: 283 HVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIE 342
Query: 343 ALRLFFAMEAAG-EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
AL LF M G P+ S+ S C E G+ GL NV +L
Sbjct: 343 ALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLC 402
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY+K G + A FY + +VSW +IA + +G+ EA+ F QMM L P+ +
Sbjct: 403 DMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGI 462
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TFL++L AC + +G + + K+ ++ E + + + + L +A + +
Sbjct: 463 TFLSLLCACGSPVTINQGTQIHSYIIKI-GLDKEAAVCNSLLTMYTKCSNLHDAFNVFKD 521
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
+ ++ W +L AC H+ + GE +RLF+L
Sbjct: 522 VSENANLVSWNAILSACLQHK--QAGE--VFRLFKL 553
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 152/345 (44%), Gaps = 7/345 (2%)
Query: 6 LPPRLNKIYR--SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
LP + Y+ S + WN+ I D + ++A+ F +M + P+ +TF + A
Sbjct: 411 LPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCA 470
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF-DKMPDRDVAS 122
C IH +I+K + V +++ MY KC L A+ +F D + ++ S
Sbjct: 471 CGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVS 530
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
WNA++ Q +V LF M + D +T+ + L + VH F +
Sbjct: 531 WNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSV 590
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
G+ DVSV N I YAKC LK A VF + +VSW+S+I G ++
Sbjct: 591 KSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQN--PDIVSWSSLIVGYAQFGLGHEA 648
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLIS 301
LN +R M G +P+ T + +LS+C + +G ++ I G ++ ++
Sbjct: 649 LNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVD 708
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVS-WTAMISGYAQKGDLDEALR 345
+ ++ G + A M ++ W +++ G++D A R
Sbjct: 709 LLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAER 753
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 322/599 (53%), Gaps = 9/599 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIE----PNNLTFPFIAKACAKLSDFLYSQMIH 77
WNS IR D + ++ LL M + + + P+ T + CA+ + + +H
Sbjct: 6 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G VK ++ + ++DMY+KC + A +F +++V SWN M+ GF+ G
Sbjct: 66 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125
Query: 138 KVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ M G ++AD VT++ H L LK +H + + + V N
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 185
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++++YAKC L A+ VF GI +TV SWN++IGG + SL+ + M G
Sbjct: 186 FVASYAKCGSLSYAQRVFHGIRS--KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 243
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD TV SLLS+C ++L G+ VH I + D+ V +++S+Y CG++ + + L
Sbjct: 244 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 303
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M D++ VSW +I+GY Q G D AL +F M G ++++ + C +L
Sbjct: 304 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 363
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
LG+ YA L+D+ + +LIDMY+K GSI + ++F L EK+ SW MI G
Sbjct: 364 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 423
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
++G EA+ LF +M P+ +TFL VL AC H+G + +G Y + M + + P
Sbjct: 424 GIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 483
Query: 496 LNHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
L HY+C+ D+LGR G+L +AL V + M ++D GIW +LL +C+IH+N+E+GE VA +L
Sbjct: 484 LKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL 543
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
FELEP YV ++N+YA G+W+ V +R M ++K G S + +N K +F V
Sbjct: 544 FELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 602
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 180/360 (50%), Gaps = 8/360 (2%)
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV----GIQADFVTVMGLTQAAIHAKHLSL 173
R+ SWN+MI F+ GF E+ L M D T++ + + + L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
K VH + + + +D ++ + N + Y+KC + A+++F+ + VVSWN+++GG
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGGF 118
Query: 234 TYGDKFDDSLNFYRHMIYDG--FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ + + R M+ G + D T+++ + C L + +H + + F
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 178
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+ V N ++ Y+KCG + A+ +F G+ +T SW A+I G+AQ D +L M+
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+G +PD TV S++S C + +L LGK + L+ ++ V +++ +Y CG +
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+ LF A+ +K++VSW T+I G NG AL +F QM+ ++ ++ + V AC+
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 177/375 (47%), Gaps = 19/375 (5%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS T+N WN+ I N+ +L +MK + + P++ T + AC+KL +
Sbjct: 207 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 266
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG I+++ D+FV +++ +Y C L LFD M D+ + SWN +I G+ Q G
Sbjct: 267 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG 326
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
F ++ L +F M L GIQ +++M + A L L + H++ + ++ D +
Sbjct: 327 FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIAC 386
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I YAK + + VF G++E ++ SWN++I G +++ + M G
Sbjct: 387 SLIDMYAKNGSITQSSKVFNGLKE--KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 444
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA- 312
PD T + +L++C + +G R + +G ++ +I M + G +D A
Sbjct: 445 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 504
Query: 313 RFLFDGMCDRTRVS-WTAMISG--YAQKGDLDE--ALRLFFAMEAAGEVPDLVTVLSMIS 367
R + + M + V W +++S Q ++ E A +LF E E P+ +LS +
Sbjct: 505 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF---ELEPEKPENYVLLSNLY 561
Query: 368 GCGQSGALELGKWFD 382
LGKW D
Sbjct: 562 A-------GLGKWED 569
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/531 (37%), Positives = 296/531 (55%), Gaps = 6/531 (1%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
++F ++ YAK R A++LFD++P+ D+ S+N +I +A G L LF MR
Sbjct: 73 NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+G+ D T+ + A + L+ +HS + G D+ VSV N ++ Y K DL
Sbjct: 133 EMGLDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF G+ G+R VSWNS+I + +L ++ M+ G D+ T+ S+L++
Sbjct: 191 DAKRVFYGMG-GIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRVS 326
C E L G H I GF + V + LI +YSKCG + R +F+ + + V
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 327 WTAMISGYAQKGD-LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W M+SGY+Q + L++AL F M+ G P+ + + +IS C + GK + A
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369
Query: 386 CSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
+ N + V NALI MYSKCG++ DAR LF + E VS +MIAG A +G +E+
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L LF M+E + P +TF++VL AC H G +E+GW YFN+M + + + PE HYSCM D
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
LLGR GKL EA + + MP + W +LL AC+ H NIE+ A ++ +LEP +AAP
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N+YA GRW+ VA +R M+ VKK PG S + + + F ED
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAED 600
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 160/348 (45%), Gaps = 12/348 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I E KAL LF+ M + + + T + A L D HG ++
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLI 267
Query: 82 KSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMPDRDVASWNAMIVGFAQ-MGFLEK 138
K+ F + V + ++D+Y+KC DC K+F+++ + D+ WN M+ G++Q FLE
Sbjct: 268 KTGFHQNSHVGSGLIDLYSKCGGGMSDCR-KVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 197
L F M+ +G + + + + + A + S K +HS + + ++ +SV N I
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y+KC +L+ A +F + E VS NS+I G +SL+ ++ M+ P
Sbjct: 387 AMYSKCGNLQDARRLFDRMAE--HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPT 444
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T +S+LS+C + +G + + + + + +I + + G + A L
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 317 DGMC-DRTRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGEVPDLV 360
M + + W +++ G+++ A++ +E + P +V
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVV 552
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/632 (31%), Positives = 323/632 (51%), Gaps = 43/632 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS V+ K L +FR M + ++P+ +T I AC+ L D + IHG +
Sbjct: 210 WNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFAL 269
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++FV +V++Y C + A +FD MP R+V +WN++ + GF +K L
Sbjct: 270 KHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLN 329
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M L G++ D + + + A K L K++H F + G+ DV VC ++ YA
Sbjct: 330 VFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYA 389
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIG---GCTYGDKFDDSLNFYRHMIYDGFRPDV 258
C ++ A+ VF + R VV+WNS+ C + K LN +R M+ +G +PD+
Sbjct: 390 NCLCVREAQTVFDLMPH--RNVVTWNSLSSCYVNCGFPQK---GLNVFREMVLNGVKPDL 444
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T++S+L +C + L G+++H + +G DV V N L+S+Y+KC + A+ +FD
Sbjct: 445 VTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDL 504
Query: 319 MCDRT-----------------------------------RVSWTAMISGYAQKGDLDEA 343
+ R ++W+ +I G + ++EA
Sbjct: 505 IPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEA 564
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+ +F M+ G PD T+ S++ C S L +GK Y ++ NAL+DM
Sbjct: 565 MEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDM 624
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y+KCG + +R +F +P K V SW TMI ++G EAL LF +M+ ++P+ TF
Sbjct: 625 YAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATF 684
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
VL AC+H+ +E+G FN M++ + V PE HY+C+ D+ R G L+EA F+Q MP
Sbjct: 685 TCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMP 744
Query: 524 IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVAN 583
++ A W L C++++N+E+ + A +LFE++P+ +A YV + NI W +
Sbjct: 745 MEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASK 804
Query: 584 LRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R +MK + K PG S H+ + TF D
Sbjct: 805 IRKLMKERGITKTPGCSWFHVGNRVHTFVAGD 836
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 272/560 (48%), Gaps = 45/560 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS V+ + L +FR+M N ++ N LT I C+ L D + IHG +V
Sbjct: 109 WNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVV 168
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D+FV + V+ YAKC + A +FD MP RDV +WN++ + GF +K L
Sbjct: 169 RHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLN 228
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M L G++ D VTV + A + L K++H F + G+ +V V N ++ Y
Sbjct: 229 VFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYE 288
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIG---GCTYGDKFDDSLNFYRHMIYDGFRPDV 258
C ++ A+ VF + R V++WNS+ C + K LN +R M +G +PD
Sbjct: 289 SCLCVREAQAVFDLMPH--RNVITWNSLASCYVNCGFPQK---GLNVFREMGLNGVKPDP 343
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+ S+L +C + L G+ +H + +G DV V L+++Y+ C + A+ +FD
Sbjct: 344 MAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDL 403
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R V+W ++ S Y G + L +F M G PDLVT+LS++ C L+ G
Sbjct: 404 MPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG 463
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV------------- 425
K +A G+ ++V VCNAL+ +Y+KC + +A+ +F +P + V
Sbjct: 464 KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTN 523
Query: 426 ----------------------VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
++W+ +I GC N EA+++F +M + +P+ T
Sbjct: 524 KEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTI 583
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
++L+AC+ + L G + + ++ + +L + + D+ + G L + + MP
Sbjct: 584 YSILRACSLSECLRMGKEIHCYVFRHWK-DWDLARTNALVDMYAKCGGLSLSRNVFDMMP 642
Query: 524 IKSDAGIWGTLLCACKIHRN 543
IK D W T++ A +H N
Sbjct: 643 IK-DVFSWNTMIFANGMHGN 661
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 236/448 (52%), Gaps = 10/448 (2%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
++A+ ++ + I+P+ F +AKACA D L + H + SD+ +
Sbjct: 22 NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+ Y KC ++ A ++FD + RDV +WN++ + GF ++ L +F M L ++A+
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
+TV + + L K +H F + G+ DV V + +++ YAKC ++ A+ VF
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 216 IEEGLRTVVSWNSIIG---GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
+ R VV+WNS+ C + K LN +R M+ DG +PD TV +LS+C +
Sbjct: 202 MPH--RDVVTWNSLSSCYVNCGFPQK---GLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
L G+ +H + +G +V V N L+++Y C + A+ +FD M R ++W ++ S
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y G + L +F M G PD + + S++ C Q L+ GK +A G+ +
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE 376
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE-ALDLFHQM 451
+V VC AL+++Y+ C + +A+ +F +P + VV+W ++ + C +N F + L++F +M
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSL-SSCYVNCGFPQKGLNVFREM 435
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ ++P+ VT L++L AC+ L+ G
Sbjct: 436 VLNGVKPDLVTMLSILHACSDLQDLKSG 463
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 175/348 (50%), Gaps = 6/348 (1%)
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G + + ++ + R GI+ D M + +A ++ +K H GV +DVS+
Sbjct: 19 GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF-DDSLNFYRHMIYD 252
N +I AY KC ++ A VF + R VV+WNS+ C F LN +R M +
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVA--RDVVTWNSL-SACYVNCGFPQQGLNVFRKMGLN 135
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+ + TV S+L C + L G+ +H + +G DV V + ++ Y+KC + A
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREA 195
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ +FD M R V+W ++ S Y G + L +F M G PD VTV ++S C
Sbjct: 196 QTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDL 255
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L+ GK +A G+ +NV V NAL+++Y C + +A+ +F +P + V++W ++
Sbjct: 256 QDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSL- 314
Query: 433 AGCALNGEFVE-ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A C +N F + L++F +M ++P+ + ++L AC+ L+ G
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG 362
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/612 (33%), Positives = 326/612 (53%), Gaps = 9/612 (1%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE----PNNLTFPFIAKAC 64
+L I + WNS IR D + ++ LL M + + + P+ T + C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
A+ + + +HG VK ++ + ++DMY+KC + A +F +++V SWN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
M+ GF+ G + M G ++AD VT++ H L LK +H + +
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
+ V N ++++YAKC L A+ VF GI +TV SWN++IGG + S
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS--KTVNSWNALIGGHAQSNDPRLS 480
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L+ + M G PD TV SLLS+C ++L G+ VH I + D+ V +++S+
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y CG++ + + LFD M D++ VSW +I+GY Q G D AL +F M G +++
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ + C +L LG+ YA L+D+ + +LIDMY+K GSI + ++F L E
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
K+ SW MI G ++G EA+ LF +M P+ +TFL VL AC H+G + +G Y
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCACKIH 541
+ M + + P L HY+C+ D+LGR G+L +AL V + M ++D GIW +LL +C+IH
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 780
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+N+E+GE VA +LFELEP YV ++N+YA G+W+ V +R M ++K G S
Sbjct: 781 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 840
Query: 602 VHINGKTCTFTV 613
+ +N K +F V
Sbjct: 841 IELNRKVFSFVV 852
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 259/535 (48%), Gaps = 13/535 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALL--LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
RS + QWN+ I + +NE + +L + D+ P++ T+P + KACA +SD
Sbjct: 147 RSKNLFQWNAVI-SSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+HG +VK+ D+FV +V Y + A +LFD MP+R++ SWN+MI F+
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 133 MGFLEKVLCLFYNMRLV----GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF E+ L M D T++ + + + L K VH + + + +D
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
++ + N + Y+KC + A+++F+ + VVSWN+++GG + + + R
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 249 MIYDG--FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M+ G + D T+++ + C L + +H + + F + V N ++ Y+KC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + A+ +F G+ +T SW A+I G+AQ D +L M+ +G +PD TV S++
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S C + +L LGK + L+ ++ V +++ +Y CG + + LF A+ +K++V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW T+I G NG AL +F QM+ ++ ++ + V AC+ L G
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
K + + + + D+ + G + ++ + KS A W ++ IH
Sbjct: 624 LK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIH 676
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 199/429 (46%), Gaps = 10/429 (2%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
+ +A K D + IH + S +D + T ++ MYA C D + +FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+++ WNA+I +++ ++VL F M + D T + +A + + +
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH + G+ DV V N +S Y + A +F + E R +VSWNS+I +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNSMIRVFSDN 266
Query: 237 DKFDDSLNFYRHMIYD----GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
++S M+ + F PDV T+V++L C + G+ VH + D +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ + N L+ MYSKCG I +A+ +F ++ VSW M+ G++ +GD + M A
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 353 AGE--VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
GE D VT+L+ + C L K Y+ N +V NA + Y+KCGS+
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A+ +F+ + KTV SW +I G A + + +LD QM L P+ T ++L AC
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 471 THAGFLEKG 479
+ L G
Sbjct: 507 SKLKSLRLG 515
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VP 357
+I+MY+ CG D +RF+FD + + W A+IS Y++ DE L F M + + +P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T +I C + +G GL ++V V NAL+ Y G + DA +LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD----LRPNRVTFLAVLQACTHA 473
+PE+ +VSW +MI + NG E+ L +MME + P+ T + VL C
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
+ G G K+ +++ EL + + D+ + G + A + M + W T
Sbjct: 306 REIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNT 363
Query: 534 LL 535
++
Sbjct: 364 MV 365
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS------MISGCGQSGALELGKWFDNY 384
IS + + GDLD++ R E +L ++ G+ +E+G+
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 385 AC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
S L+++ ++C +I MY+ CGS D+R +F AL K + W +I+ + N + E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 444 ALDLFHQMME-LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
L+ F +M+ DL P+ T+ V++AC + G L+ K V ++ + +
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNAL 228
Query: 503 ADLLGRKGKLKEALDFVQSMPIKS 526
G G + +AL MP ++
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERN 252
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 206/612 (33%), Positives = 326/612 (53%), Gaps = 9/612 (1%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE----PNNLTFPFIAKAC 64
+L I + WNS IR D + ++ LL M + + + P+ T + C
Sbjct: 598 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 657
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
A+ + + +HG VK ++ + ++DMY+KC + A +F +++V SWN
Sbjct: 658 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 717
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
M+ GF+ G + M G ++AD VT++ H L LK +H + +
Sbjct: 718 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 777
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
+ V N ++++YAKC L A+ VF GI +TV SWN++IGG + S
Sbjct: 778 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS--KTVNSWNALIGGHAQSNDPRLS 835
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L+ + M G PD TV SLLS+C ++L G+ VH I + D+ V +++S+
Sbjct: 836 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 895
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y CG++ + + LFD M D++ VSW +I+GY Q G D AL +F M G +++
Sbjct: 896 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 955
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ + C +L LG+ YA L+D+ + +LIDMY+K GSI + ++F L E
Sbjct: 956 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 1015
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
K+ SW MI G ++G EA+ LF +M P+ +TFL VL AC H+G + +G Y
Sbjct: 1016 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 1075
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCACKIH 541
+ M + + P L HY+C+ D+LGR G+L +AL V + M ++D GIW +LL +C+IH
Sbjct: 1076 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 1135
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+N+E+GE VA +LFELEP YV ++N+YA G+W+ V +R M ++K G S
Sbjct: 1136 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 1195
Query: 602 VHINGKTCTFTV 613
+ +N K +F V
Sbjct: 1196 IELNRKVFSFVV 1207
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 259/535 (48%), Gaps = 13/535 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALL--LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
RS + QWN+ I + +NE + +L + D+ P++ T+P + KACA +SD
Sbjct: 502 RSKNLFQWNAVI-SSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 560
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+HG +VK+ D+FV +V Y + A +LFD MP+R++ SWN+MI F+
Sbjct: 561 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 620
Query: 133 MGFLEKVLCLFYNMRLV----GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF E+ L M D T++ + + + L K VH + + + +D
Sbjct: 621 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 680
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
++ + N + Y+KC + A+++F+ + VVSWN+++GG + + + R
Sbjct: 681 ELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 738
Query: 249 MIYDG--FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M+ G + D T+++ + C L + +H + + F + V N ++ Y+KC
Sbjct: 739 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 798
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + A+ +F G+ +T SW A+I G+AQ D +L M+ +G +PD TV S++
Sbjct: 799 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 858
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S C + +L LGK + L+ ++ V +++ +Y CG + + LF A+ +K++V
Sbjct: 859 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 918
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW T+I G NG AL +F QM+ ++ ++ + V AC+ L G
Sbjct: 919 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 978
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
K + + + + D+ + G + ++ + KS A W ++ IH
Sbjct: 979 LK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIH 1031
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 199/429 (46%), Gaps = 10/429 (2%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
+ +A K D + IH + S +D + T ++ MYA C D + +FD +
Sbjct: 444 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 503
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+++ WNA+I +++ ++VL F M + D T + +A + + +
Sbjct: 504 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 563
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH + G+ DV V N +S Y + A +F + E R +VSWNS+I +
Sbjct: 564 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNSMIRVFSDN 621
Query: 237 DKFDDSLNFYRHMIYD----GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
++S M+ + F PDV T+V++L C + G+ VH + D +
Sbjct: 622 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 681
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ + N L+ MYSKCG I +A+ +F ++ VSW M+ G++ +GD + M A
Sbjct: 682 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 741
Query: 353 AGE--VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
GE D VT+L+ + C L K Y+ N +V NA + Y+KCGS+
Sbjct: 742 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 801
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A+ +F+ + KTV SW +I G A + + +LD QM L P+ T ++L AC
Sbjct: 802 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 861
Query: 471 THAGFLEKG 479
+ L G
Sbjct: 862 SKLKSLRLG 870
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 6/222 (2%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VP 357
+I+MY+ CG D +RF+FD + + W A+IS Y++ DE L F M + + +P
Sbjct: 481 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 540
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T +I C + +G GL ++V V NAL+ Y G + DA +LF
Sbjct: 541 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 600
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD----LRPNRVTFLAVLQACTHA 473
+PE+ +VSW +MI + NG E+ L +MME + P+ T + VL C
Sbjct: 601 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 660
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ G G K+ +++ EL + + D+ + G + A
Sbjct: 661 REIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGCITNA 701
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS------MISGCGQSGALELGKWFDNY 384
IS + + GDLD++ R E +L ++ G+ +E+G+
Sbjct: 405 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 464
Query: 385 AC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
S L+++ ++C +I MY+ CGS D+R +F AL K + W +I+ + N + E
Sbjct: 465 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 524
Query: 444 ALDLFHQMME-LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
L+ F +M+ DL P+ T+ V++AC + G L+ K V ++ + +
Sbjct: 525 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNAL 583
Query: 503 ADLLGRKGKLKEALDFVQSMPIKS 526
G G + +AL MP ++
Sbjct: 584 VSFYGTHGFVTDALQLFDIMPERN 607
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/598 (32%), Positives = 313/598 (52%), Gaps = 8/598 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE--PNNLTFPFIAKACAKLSDFLYSQ 74
S++ +N IR V H A+ +F RM I+ P+ T+PF+AKA +L
Sbjct: 78 SSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGL 137
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+IHG I++S F D +VQ ++ MY R++ A +FD M +RDV SWN MI G+ + G
Sbjct: 138 VIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNG 197
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ L +F M G+ D T++ + H K L + ++VH + + V N
Sbjct: 198 YMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
++ Y KC + A VF +E R V++W +I G +++L R M ++G
Sbjct: 258 ALVNMYLKCGRMDEARFVFGRMER--RDVITWTCMINGYIEDGDVENALELCRLMQFEGV 315
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
RP+ T+ SL+S+C L G+ +H I D+ + +LISMY+KC ID
Sbjct: 316 RPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFR 375
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F G W+A+I+G Q + +AL LF M P++ T+ S++
Sbjct: 376 VFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLAD 435
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK----TVVSWTT 430
L Y G ++ L+ +YSKCG++ A ++F + EK VV W
Sbjct: 436 LRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I+G ++G+ AL +F +M+ + PN +TF + L AC+H+G +E+G F+ M + Y
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHY 555
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ NHY+C+ DLLGR G+L EA + + ++P + + IWG LL AC H N+++GE
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMA 615
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A +LFELEP + YV +ANIYA GRW + +R MM+ ++K PG S + I +
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIRSNS 673
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 226/474 (47%), Gaps = 9/474 (1%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H H++ S + T V YA C + A KLFD+MP + S+N +I + +
Sbjct: 34 TKALHCHVITGGRVSGHILSTLSVT-YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVR 92
Query: 133 MGFLEKVLCLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
G + +F M GI+ D T + +AA K +SL +H + D
Sbjct: 93 DGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDK 152
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N ++ Y ++MA VF ++ R V+SWN++I G +D+L + M+
Sbjct: 153 YVQNALLAMYMNFGRVEMARNVFDVMKN--RDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G PD T+VS+L C + L GR VH + V N L++MY KCG +D
Sbjct: 211 NEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
ARF+F M R ++WT MI+GY + GD++ AL L M+ G P+ VT+ S++S CG
Sbjct: 271 EARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACG 330
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ L GK +A + ++++ +LI MY+KC I +F W+
Sbjct: 331 DALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSA 390
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+IAGC N +ALDLF +M D+ PN T ++L A L + +TK
Sbjct: 391 IIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTG 450
Query: 491 QVNPELNHYSCMADLLGRKGKLKEA---LDFVQSMPIKSDAGIWGTLLCACKIH 541
++ L+ + + + + G L+ A + +Q D +WG L+ +H
Sbjct: 451 FMS-SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 207/433 (47%), Gaps = 16/433 (3%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ ++ + WN+ I + AL++F M ++P++ T + C L
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEM 236
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H + + I V+ +V+MY KC R+D A +F +M RDV +W MI G+ +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIE 296
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G +E L L M+ G++ + VT+ L A A L+ K +H + I V +D+ +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIII 356
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ IS YAKC + + VF G W++II GC + D+L+ ++ M +
Sbjct: 357 ETSLISMYAKCKHIDLCFRVFSGASRN--HTGPWSAIIAGCVQNELVRDALDLFKRMRRE 414
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
P++ T+ SLL + L Q +H + GF + L+ +YSKCG ++SA
Sbjct: 415 DVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 313 RFLFDGMCDRTR----VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+F+G+ ++ + V W A+ISGY GD AL++F M +G P+ +T S ++
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 369 CGQSGALELGK-----WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-E 422
C SG +E G ++Y + N C ++D+ + G + +A L +P E
Sbjct: 535 CSHSGLVEEGLTLFSFMLEHYKTLA--RSNHYTC--IVDLLGRAGRLDEAYNLITTIPFE 590
Query: 423 KTVVSWTTMIAGC 435
T W ++A C
Sbjct: 591 PTSTIWGALLAAC 603
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 10/288 (3%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL+ +++ + + +H H I G + +++TL Y+ CG I AR LFD M
Sbjct: 20 SLLNHYAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQS 78
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--VPDLVTVLSMISGCGQSGALELGKW 380
+ +S+ +I Y + G +A+ +F M + G VPD T + G+ ++ LG
Sbjct: 79 SLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLV 138
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ V NAL+ MY G + AR +F + + V+SW TMI+G NG
Sbjct: 139 IHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+AL +F M+ + P+ T +++L C H LE G L+ + ++ ++ +
Sbjct: 199 MNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEE-KRLGDKIEVKN 257
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ ++ + G++ EA FV + D W C I+ IE G+
Sbjct: 258 ALVNMYLKCGRMDEA-RFVFGRMERRDVITW-----TCMINGYIEDGD 299
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 318/627 (50%), Gaps = 76/627 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + N H A L++ M N + +N T+P + +AC+ ++ +H H++
Sbjct: 46 WNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVL 105
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F SD++V+ T+++ ++ C + A ++F++ D SWN+++ G+ ++G +E+
Sbjct: 106 KLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKH 165
Query: 142 LFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+++ M R + + + G+ + A L
Sbjct: 166 IYHQMPERSIIASNSMIVLFGMRGLVVEACKL---------------------------- 197
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
F + E + +V+W+++I + +++++ + M G D
Sbjct: 198 -------------FDEMLE--KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEV 242
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI---------- 309
VS LS+C + G+L+HS + G + +++ N LI MYSKCGDI
Sbjct: 243 VAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEA 302
Query: 310 ---------------------DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
D+A+ +FD M ++ VSW++MISGYAQ DE L LF
Sbjct: 303 YLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQ 362
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M+ +G PD T++S+IS C + ALE GKW Y GL NV++ LIDMY KCG
Sbjct: 363 EMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCG 422
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ A E+FY + EK + +W +I G A+NG +LD+F M + + PN +TF+ VL
Sbjct: 423 CVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLG 482
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC H G +++G +F M +++ P + HY CM DLLGR GKL+EA + + MP+ D
Sbjct: 483 ACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDV 542
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM 588
WG LL ACK H + E+G V +L EL+P +V ++NIYA G+WD V +R MM
Sbjct: 543 ATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMM 602
Query: 589 KRNQVKKFPGQSLVHINGKTCTFTVED 615
+++V K PG S++ NG F D
Sbjct: 603 TKHRVLKIPGCSMIEANGVIHEFLAGD 629
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 205/474 (43%), Gaps = 76/474 (16%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+D ++F+ + + + WN MI + Q L+ +M + AD T L Q
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A + K VH+ + +G D+DV V NT I+ ++ C+++ A VF E +
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFN--ESSVLDS 144
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWNSI+ G +++ + Y M P+ + + S
Sbjct: 145 VSWNSILAGYIEIGNVEEAKHIYHQM------PERSIIAS-------------------- 178
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
N++I ++ G + A LFD M ++ V+W+A+I+ + Q +EA
Sbjct: 179 -------------NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEA 225
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+R F M G + D V +S +S C + +GK + + G + + + NALI M
Sbjct: 226 IRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYM 285
Query: 404 YSKCGSIGDAREL-------------------------------FYALPEKTVVSWTTMI 432
YSKCG I AR+L F ++PEK VVSW++MI
Sbjct: 286 YSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMI 345
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQ 491
+G A N F E L LF +M +P+ T ++V+ AC LE+G W + +
Sbjct: 346 SGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLT 405
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+N L + + D+ + G ++ AL+ M I+ W L+ ++ +E
Sbjct: 406 INVILG--TTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILGLAMNGLVE 456
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL-----SDFLYS 73
I+ WN+ I +L +F MKK + PN +TF + AC + +
Sbjct: 439 ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFY 498
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMI 127
MIH H ++ ++ MVD+ + +L A +L ++MP DVA+W A++
Sbjct: 499 SMIHDHKIQ----PNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 549
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 319/595 (53%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V+ +++++AL+LF M + + KACA + + +++HG
Sbjct: 91 WTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFS 150
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VKS +FV + ++DMY K +++ ++F+KM R+V SW A+I G G+ + L
Sbjct: 151 VKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGL 210
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M + D T +A+ + L K++H+ I G D V NT + Y
Sbjct: 211 LYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMY 270
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC +F + + VVSW ++I + + ++ ++ M P+ T
Sbjct: 271 NKCGKPDYVMRLFEKMR--MPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYT 328
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++SSC A G +H H + G +SV N++I++YSKCG + SA +F G+
Sbjct: 329 FAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGIT 388
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SW+ +IS Y+Q G EA M G P+ + S++S CG LE GK
Sbjct: 389 RKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ 448
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G+ MV +A+I MYSKCGS+ +A ++F + ++SWT MI G A +G
Sbjct: 449 VHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGY 508
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA++LF ++ + L+P+ V F+ VL AC HAG ++ G+ YF LMT VY+++P HY
Sbjct: 509 SQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYG 568
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R G+L EA ++SMP +D +W TLL AC++H +++ G + A +L +L+P+
Sbjct: 569 CLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPN 628
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
SA ++ +ANIYA GRW A++R +MK V K G S V++N + F D
Sbjct: 629 SAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGD 683
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 191/425 (44%), Gaps = 4/425 (0%)
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL-VGIQADFVTVM 159
K +L A +FDKM RD SW +I G+ + L LF NM + G Q D +
Sbjct: 69 KQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMIS 128
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
+A ++ + +H F + G+ V V + I Y K ++ VF +
Sbjct: 129 VALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMT- 187
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
R VVSW +II G + + L ++ M D T L + L G+
Sbjct: 188 -RNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKA 246
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
+H+ I GFD VINTL +MY+KCG D LF+ M VSWT +IS Y Q G+
Sbjct: 247 IHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGE 306
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
+ A+ F M + P+ T ++IS C A + G+ + GL + + V N+
Sbjct: 307 EEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANS 366
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
+I +YSKCG + A +F+ + K ++SW+T+I+ + G EA D M +PN
Sbjct: 367 IITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPN 426
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+VL C LE+G + + ++ E +S + + + G ++EA
Sbjct: 427 EFALSSVLSVCGSMALLEQGKQVHAHLLCI-GIDHEAMVHSAIISMYSKCGSVQEASKIF 485
Query: 520 QSMPI 524
M I
Sbjct: 486 NGMKI 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 156/348 (44%), Gaps = 26/348 (7%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + R + W + I V E A+ F+RM+K+ + PN TF + +CA L+
Sbjct: 281 RLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLA 340
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + IHGH+++ + + V +++ +Y+KC L A +F + +D+ SW+ +I
Sbjct: 341 AAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIIS 400
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
++Q G+ ++ MR G + + + + L K VH+ + IG+D
Sbjct: 401 VYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDH 460
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + IS Y+KC ++ A +F G++ + ++SW ++I G +++N +
Sbjct: 461 EAMVHSAIISMYSKCGSVQEASKIFNGMK--INDIISWTAMINGYAEHGYSQEAINLFEK 518
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT---------- 298
+ G +PD + +L++C H+ + GF + + N
Sbjct: 519 ISSVGLKPDYVMFIGVLTAC-----------NHAGMVDLGFYYFMLMTNVYRISPSKEHY 567
Query: 299 --LISMYSKCGDIDSARFLFDGMCDRT-RVSWTAMISGYAQKGDLDEA 343
LI + + G + A + M T V W+ ++ GD+D
Sbjct: 568 GCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRG 615
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-AG 354
+N+ + K G + AR++FD M R +SWT +I+GY D EAL LF M G
Sbjct: 60 LNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPG 119
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D + + C + G+ ++ GL +V V +ALIDMY K G I
Sbjct: 120 PQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGC 179
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F + + VVSWT +IAG G +E L F +M + + TF L+A +
Sbjct: 180 RVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSS 239
Query: 475 FLEKG 479
L G
Sbjct: 240 LLHHG 244
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 322/596 (54%), Gaps = 5/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V+ +++++AL+LF M + ++ + KAC + + +++HG
Sbjct: 124 WTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFS 183
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VKS + +FV + ++DMY K +++ ++F KM R+V SW A+I G G+ + L
Sbjct: 184 VKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEAL 243
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M + + D T +A+ + L K++H+ I G D V NT + Y
Sbjct: 244 LYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMY 303
Query: 201 AKCNDLKMAELVFRGIEE-GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
KC A+ V R E+ + VVSW ++I + + ++ ++ M P+
Sbjct: 304 NKCGK---ADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKY 360
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T +++S+C G +H H + G +SV N+++++YSK G + SA +F G+
Sbjct: 361 TFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGI 420
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ +SW+ +I+ Y+Q G EA M G P+ + S++S CG LE GK
Sbjct: 421 TRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGK 480
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ G+ MV +ALI MYSKCGS+ +A ++F + ++SWT MI G A +G
Sbjct: 481 QVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHG 540
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EA++LF ++ + L+P+ VTF+ VL AC+HAG ++ G+ YF LMT YQ++P HY
Sbjct: 541 YSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHY 600
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
C+ DLL R G+L EA ++SMP +D +W TLL +C++H +++ G + A +L L+P
Sbjct: 601 GCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDP 660
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+SA ++ +ANIYA GRW A++R +MK V K G S V++N K F D
Sbjct: 661 NSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGD 716
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 248/528 (46%), Gaps = 38/528 (7%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ K + W + I V +ALL F M + + ++ TF KA A S
Sbjct: 213 RVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSS 272
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + IH +K F FV T+ MY KC + D +LF+KM DV SW +I
Sbjct: 273 LLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLIT 332
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ Q G E + F MR + + T + A + + +H + +G+
Sbjct: 333 TYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVD 392
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+SV N+ ++ Y+K LK A LVF GI + ++SW++II + G ++ ++
Sbjct: 393 ALSVANSIVTLYSKSGLLKSASLVFHGITR--KDIISWSTIIAVYSQGGYAKEAFDYLSW 450
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +G +P+ + S+LS C L QG+ VH+H + G D + V + LISMYSKCG
Sbjct: 451 MRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGS 510
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
++ A +F+GM +SWTAMI+GYA+ G EA+ LF + + G PD VT + +++
Sbjct: 511 VEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTA 570
Query: 369 CGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
C +G ++LG ++ + Y S + +ID+ + G + +A + ++P
Sbjct: 571 CSHAGMVDLGFYYFMLMTNEYQISPSKEH----YGCIIDLLCRAGRLSEAEHMIRSMPCY 626
Query: 424 T-VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV-TFLAVLQACTHAG------- 474
T V W+T++ C ++G+ Q++ LD PN T +A+ G
Sbjct: 627 TDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLD--PNSAGTHIALANIYAAKGRWKEAAH 684
Query: 475 ----------FLEKGWGYFNLMTKVY------QVNPELNHYSCMADLL 506
E+GW + N+ K+ Q +P+ H + + +LL
Sbjct: 685 IRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELL 732
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 190/417 (45%), Gaps = 4/417 (0%)
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAK 169
+FDKM RD SW +I G+ + L LF NM + G+Q D + +A
Sbjct: 112 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGV 171
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
++ + +H F + G+ V V + I Y K ++ VF+ + + R VVSW +I
Sbjct: 172 NICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTK--RNVVSWTAI 229
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G + ++L ++ M D T L + L G+ +H+ I GF
Sbjct: 230 IAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGF 289
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D VINTL +MY+KCG D LF+ M VSWT +I+ Y QKG+ + A+ F
Sbjct: 290 DESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKR 349
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M + P+ T ++IS C + G+ + GL D + V N+++ +YSK G
Sbjct: 350 MRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGL 409
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ A +F+ + K ++SW+T+IA + G EA D M +PN +VL
Sbjct: 410 LKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSV 469
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
C LE+G + ++ E +S + + + G ++EA M I +
Sbjct: 470 CGSMALLEQG-KQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINN 525
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAG 354
+N+ + K G + +R++FD M R +SWT +I+GY D EAL LF M G
Sbjct: 93 LNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPG 152
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D + + CG + G+ ++ GL ++V V +ALIDMY K G I
Sbjct: 153 LQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGC 212
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F + ++ VVSWT +IAG G +EAL F +M + + TF L+A +
Sbjct: 213 RVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSS 272
Query: 475 FLEKG 479
L G
Sbjct: 273 LLHHG 277
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 192/591 (32%), Positives = 319/591 (53%), Gaps = 7/591 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I +A LF M++ I+P+++T + +S+ + Q +HG +
Sbjct: 130 WTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT---VLSLLFGVSELAHVQCLHGCAI 186
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F SDI + +M+++Y KC ++ + KLFD M RD+ SWN++I +AQ+G + +VL
Sbjct: 187 LYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLL 246
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L MRL G +A T + A L L + +H + G D V + I Y
Sbjct: 247 LLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYL 306
Query: 202 KCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
K + +A FR E + VV W ++I G D +L +R M+ G +P T
Sbjct: 307 KGGKIDIA---FRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTAT 363
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S++++C + G + + + LDV+ N+L++MY+KCG +D + +FD M
Sbjct: 364 MASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMN 423
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R VSW AM++GYAQ G + EAL LF M + + PD +T++S++ GC +G L LGKW
Sbjct: 424 RRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKW 483
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
++ GL+ ++V +L+DMY KCG + A+ F +P +VSW+ +I G +G+
Sbjct: 484 IHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGK 543
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL + + +E ++PN V FL+VL +C+H G +E+G + MTK + + P+L H++
Sbjct: 544 GEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHA 603
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R G+++EA + + + G +L AC+ + N E+G+ +A + L P
Sbjct: 604 CVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPM 663
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
A +V++A+ YA +W+ V T M+ +KK PG S + I+G TF
Sbjct: 664 DAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTF 714
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 230/463 (49%), Gaps = 5/463 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+T N N+ I + H+ L + M K + + TFP + KAC+ L+ F +
Sbjct: 24 ATTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTL 83
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ S D ++ +++++ YAK D A K+FD MP+R+V W +I +++ G +
Sbjct: 84 HQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRV 143
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ LF MR GIQ VTV+ L H+ L H I G +D+++ N+
Sbjct: 144 PEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQCL---HGCAILYGFMSDINLSNSM 200
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++ Y KC +++ + +F ++ R +VSWNS+I + L + M GF
Sbjct: 201 LNVYGKCGNIEYSRKLFDYMDH--RDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEA 258
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T S+LS L GR +H + GF LD V +LI +Y K G ID A +F
Sbjct: 259 GPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMF 318
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ D+ V WTAMISG Q G D+AL +F M G P T+ S+I+ C Q G+
Sbjct: 319 ERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYN 378
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG Y L +V N+L+ MY+KCG + + +F + + +VSW M+ G A
Sbjct: 379 LGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYA 438
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG EAL LF++M + P+ +T +++LQ C G L G
Sbjct: 439 QNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLG 481
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 200/592 (33%), Positives = 315/592 (53%), Gaps = 5/592 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I +A+ LF M ++ PN ++ + CA L D + + IH ++
Sbjct: 76 WNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYV 135
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK+ S + V +VD+Y KC + + ++FD++ +R+ SWNA+I A + + L
Sbjct: 136 VKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDAL 195
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M G++ + VT + + K K +H F + G+++D+ V N I Y
Sbjct: 196 EMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMY 255
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK A VF I E + +VSWN+++ +++ R M DG P+ T
Sbjct: 256 AKSGRSLQASNVFNQIGE--KNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVT 313
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++L +C L G+ +H+ I G +D+ V N L MY+KCG ++ AR +F +
Sbjct: 314 FTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-IS 372
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R VS+ +I GY+Q + E+LRLF M G D+V+ + +IS C AL+ GK
Sbjct: 373 LRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKE 432
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
A L ++ + NAL+D Y KCG I A ++F +P + SW +MI G + GE
Sbjct: 433 VHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGE 492
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
A++LF M E + + V+++AVL AC+H G +E+G YF M +V + P HY+
Sbjct: 493 LTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQMHYA 551
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G ++EA+ ++S+PI+ DA +WG LL AC+IH IE+ + A LF+L+P
Sbjct: 552 CMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQ 611
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+ Y ++N+YA G+WD +R +MK KK PG S V I+ + F
Sbjct: 612 HSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFV 663
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 261/521 (50%), Gaps = 12/521 (2%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TFPF+ KACA + IHG + K F SD+FV T++ Y C L ++FD+M
Sbjct: 9 TFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEM 68
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLL 174
+RDV SWN++I F+ GF + + LF M L G + + V+++ + +
Sbjct: 69 LERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTG 128
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+ +H + + G+D+ V+V N + Y KC +K + VF I E R VSWN+II
Sbjct: 129 RQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISE--RNGVSWNAIITSLA 186
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
Y ++ D+L +R MI G +P+ T S+L V + G+ +H + +G + D+
Sbjct: 187 YLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIF 246
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V N LI MY+K G A +F+ + ++ VSW AM++ +AQ A+ L M+A G
Sbjct: 247 VANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADG 306
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
E+P+ VT +++ C + G L GK A G ++ V NAL DMY+KCG + AR
Sbjct: 307 EIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLAR 366
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F + + VS+ +I G + E+L LF +M ++ + V+++ V+ AC +
Sbjct: 367 RVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLA 425
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
L++G L + + ++ L + + D + G++ A + +P + D W ++
Sbjct: 426 ALKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSR-DTASWNSM 483
Query: 535 LCACKIHRNIEIGEY-VAYRLFELEPHSAAPYVEMANIYAL 574
+ + +GE +A LFE Y ++ I L
Sbjct: 484 ILGYGM-----LGELTIAINLFEAMKEDGVEYDSVSYIAVL 519
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 163/367 (44%), Gaps = 45/367 (12%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN+ + A+ L R+M+ + PN++TF + ACA++ + IH
Sbjct: 275 NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIH 334
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+++ D+FV + DMYAKC L+ A ++F K+ RD S+N +I+G++Q
Sbjct: 335 ARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCS 393
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF M + G++ D V+ MG+ A + L K VH + + + + N +
Sbjct: 394 ESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALL 453
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + +A VFR I R SWNS+I G + ++N + M DG D
Sbjct: 454 DFYIKCGRIDLAGKVFRQIPS--RDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYD 511
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ +++LS+C SHG G ++ + F+
Sbjct: 512 SVSYIAVLSAC-------------SHG----------------------GLVEEGKKYFE 536
Query: 318 GM----CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
M T++ + M+ + G ++EA++L +E+ PD +++ C G
Sbjct: 537 HMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKL---IESLPIEPDANVWGALLGACRIHG 593
Query: 374 ALELGKW 380
+EL W
Sbjct: 594 YIELAHW 600
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 330/595 (55%), Gaps = 5/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I V + +AL LFRRM++ + N TF + S IHG ++
Sbjct: 216 WNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVL 275
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS ++D++V ++ MYAKC R++ A ++F+ M RD SWN ++ G Q L
Sbjct: 276 KSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALN 335
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F +M+ G + D V+V+ L A+ + +L K VH++ I G+D+++ + NT + YA
Sbjct: 336 YFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYA 395
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +K F + E + ++SW +II G + +++N +R + G D +
Sbjct: 396 KCCCVKYMGHAFECMHE--KDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMI 453
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+L +C ++ + + HG + DL D+ + N ++++Y + G ID AR F+ +
Sbjct: 454 GSVLRACSGLKS--RNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIR 511
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ VSWT+MI+ G EAL LF++++ PD + ++S +S +L+ GK
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G + ++L+DMY+ CG++ ++R++F+++ ++ ++ WT+MI ++G
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+A+ LF +M + ++ P+ +TFLA+L AC+H+G + +G +F +M YQ+ P HY+
Sbjct: 632 GNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYA 691
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLL R L+EA FV++MPIK + IW LL AC IH N E+GE A L + +
Sbjct: 692 CMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTE 751
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y ++NI+A GRW+ V +R MK N +KK PG S + ++ K TF D
Sbjct: 752 NSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARD 806
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 239/464 (51%), Gaps = 5/464 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI WN+ + V + +A+ L++ M+ + + TFP + KAC L + IH
Sbjct: 109 TIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAMIVGFAQMGF 135
G VK + +FV ++ MY KC L A LFD M D SWN++I G
Sbjct: 169 GVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGN 228
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M+ VG+ ++ T + Q + L +H + ADV V N
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANA 288
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ YAKC ++ A VF + R VSWN+++ G + + D+LN++R M G +
Sbjct: 289 LIAMYAKCGRMEDAGRVFESML--CRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQK 346
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD +V++L+++ L++G+ VH++ I G D ++ + NTL+ MY+KC +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHA 406
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M ++ +SWT +I+GYAQ EA+ LF ++ G D + + S++ C +
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ Y L D +M+ NA++++Y + G I AR F ++ K +VSWT+MI C
Sbjct: 467 NFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCC 525
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG VEAL+LF+ + + +++P+ + ++ L A + L+KG
Sbjct: 526 VHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 260/539 (48%), Gaps = 25/539 (4%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C Q +H ++KS F+ T +V MY KC L A K+FD+M +R + SW
Sbjct: 56 CVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSW 113
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NA++ F G + + L+ +MR++G+ D T + +A L +H +
Sbjct: 114 NALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G V VCN I+ Y KC DL A ++F GI VSWNSII ++L
Sbjct: 174 CGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEAL 233
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ +R M G + T V+ L P + G +H + DV V N LI+MY
Sbjct: 234 SLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMY 293
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
+KCG ++ A +F+ M R VSW ++SG Q +AL F M+ +G+ PD V+VL
Sbjct: 294 AKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVL 353
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
++I+ G+SG L GK YA GL N+ + N L+DMY+KC + F + EK
Sbjct: 354 NLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEK 413
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFH--QMMELDLRPNRVTFLAVLQACT---HAGFLEK 478
++SWTT+IAG A N +EA++LF Q+ +D+ P + +VL+AC+ F+ +
Sbjct: 414 DLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIG--SVLRACSGLKSRNFIRE 471
Query: 479 GWGYFNLMTKVYQVN-PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
GY V++ + ++ + + ++ G G + A +S+ K D W +++
Sbjct: 472 IHGY------VFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSK-DIVSWTSMITC 524
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
C +H + + A LF + +A I AL ANL ++ K ++ F
Sbjct: 525 C-VHNGLPVE---ALELFYSLKQTNIQPDSIAIISAL----SATANLSSLKKGKEIHGF 575
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 135/280 (48%), Gaps = 18/280 (6%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
LL CV +AL QG+ +H+ + L + L+ MY KCG + A +FD M +RT
Sbjct: 52 LLDLCVAAKALPQGQQLHA--LLLKSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
SW A++ + G EA+ L+ M G D T S++ CG G LG
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKTVVSWTTMIAGCALNGEF 441
A G + V VCNALI MY KCG +G AR LF + ++ VSW ++I+ G
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPE 495
+EAL LF +M E+ + N TF+A LQ F++ G G + K VY N
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ Y+ + G++++A +SM + D W TLL
Sbjct: 290 IAMYA-------KCGRMEDAGRVFESMLCR-DYVSWNTLL 321
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS I W S I V +AL LF +K+ +I+P+++ A A LS +
Sbjct: 511 RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGK 570
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG +++ F+ + + +++VDMYA C ++ + K+F + RD+ W +MI G
Sbjct: 571 EIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHG 630
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
K + LF M + D +T + L A H+
Sbjct: 631 CGNKAIALFKKMTDQNVIPDHITFLALLYACSHS 664
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 200/598 (33%), Positives = 321/598 (53%), Gaps = 9/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN ++ E + + A+ F M +I+ + +T + A A D + +HG V
Sbjct: 872 WNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAV 931
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAY---KLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
KS SD+ V ++V+MY+K + CAY ++F+ M D+ SWN+MI AQ E+
Sbjct: 932 KSGLDSDVSVANSLVNMYSK---MGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEE 988
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF ++ G++ D T+ + +A + L++ + +H + G AD V T I
Sbjct: 989 SVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLI 1048
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+K ++ AE +F+ ++ + WN+++ G G+ +L + + G + D
Sbjct: 1049 DVYSKSGKMEEAEFLFQNKDD--LDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSD 1106
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ + +C C L QG+ +H+H I GFD D+ V + ++ MY KCGD+ +A +F+
Sbjct: 1107 QITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 1166
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ V+WT+MISG G+ D+ALR++ M + +PD T ++I ALE
Sbjct: 1167 YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQ 1226
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ + V +L+DMY+KCG+I DA LF + + + W M+ G A
Sbjct: 1227 GRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQ 1286
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EA++LF M + P+RV+F+ +L AC+HAG + + Y + M Y + PE+
Sbjct: 1287 HGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIE 1346
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HYSC+ D LGR G ++EA +++MP K+ A I LL AC+I ++E G+ VA RLF L
Sbjct: 1347 HYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFAL 1406
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP +A YV ++NIYA RWD V + R MMKR VKK PG S + + F V+D
Sbjct: 1407 EPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDD 1464
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 165/619 (26%), Positives = 280/619 (45%), Gaps = 94/619 (15%)
Query: 29 AVDKNE--AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFW 86
+VD N+ A + L LFR ++ + +T + K C ++ +HG+ +K
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759
Query: 87 SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM 146
D+FV +V++Y+KC R+ A LFD M +RDV WN M+ G+ Q+G ++ LF
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819
Query: 147 RLVGIQADFVTVM----GLT------------QAAIHAKHLSLLKS-------------- 176
G++ D +V G++ Q +A LSL
Sbjct: 820 HRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSEC 879
Query: 177 -------------VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR-GIEEGLRT 222
V+ G++I D D ++A A +DL++ + V ++ GL +
Sbjct: 880 LWAGDNWGAIECFVNMNGLNI--DYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDS 937
Query: 223 VVS-WNSIIG-----GCTY--GDKFDD------------------------SLNFYRHMI 250
VS NS++ GC Y + F+D S+N + ++
Sbjct: 938 DVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLL 997
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQG----RLVHSHGIHYGFDLDVSVINTLISMYSKC 306
++G +PD T+ S+L +C +L+ G R +H H + G D V TLI +YSK
Sbjct: 998 HEGLKPDHFTLASVLRAC---SSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKS 1054
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G ++ A FLF D W AM+ GY D +AL LF + +GE D +T+ +
Sbjct: 1055 GKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAA 1114
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
CG L+ GK +A G ++ V + ++DMY KCG + +A +F + V
Sbjct: 1115 KACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV 1174
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
+WT+MI+GC NG +AL ++H+M + + P+ TF +++A + LE+G +
Sbjct: 1175 AWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV 1234
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
K+ V+ S + D+ + G +++A + M +++ A +W +L H N E
Sbjct: 1235 IKLDCVSDPFVGTS-LVDMYAKCGNIEDAYRLFKKMNVRNIA-LWNAMLVGLAQHGNAE- 1291
Query: 547 GEYVAYRLFE-LEPHSAAP 564
A LF+ ++ H P
Sbjct: 1292 ---EAVNLFKSMKSHGIEP 1307
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 187/408 (45%), Gaps = 32/408 (7%)
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ L + H IV S D F+ ++ MY+KC L A ++FD P+RD+ +WNA++
Sbjct: 636 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 695
Query: 129 GFAQM-----GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
+A G ++ L LF +R +T+ + + +++ L + VH + I
Sbjct: 696 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 755
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
IG++ DV V ++ Y+KC ++ A L+F + E R VV WN ++ G ++
Sbjct: 756 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRE--RDVVLWNMMLKGYVQLGLEKEAF 813
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ G RPD + V L+ + V +G+ + Y L +S N
Sbjct: 814 QLFSEFHRSGLRPDEFS-VQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNP----- 867
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
D C W +S GD A+ F M D VT+L
Sbjct: 868 -------------DVFC------WNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLL 908
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+++ + LELGK A GL +V V N+L++MYSK G ARE+F +
Sbjct: 909 VVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL 968
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
++SW +MI+ CA + E+++LF ++ L+P+ T +VL+AC+
Sbjct: 969 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS 1016
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 5/222 (2%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
LL + + L+ G+ H+ + G D + N L++MYSKCG + SAR +FD +R
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 324 RVSWTAMISGYA-----QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
V+W A++ YA G+ E L LF + A+ +T+ ++ C SG L
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ YA GL+ +V V AL+++YSKCG + DAR LF + E+ VV W M+ G
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
G EA LF + LRP+ + +L + + E W
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 148/356 (41%), Gaps = 42/356 (11%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L + AI +L L K H+ + G D + N ++ Y+KC L A VF E
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPE-- 684
Query: 221 RTVVSWNSIIGGCTYGDKFD-------DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
R +V+WN+I+G Y D + L+ +R + T+ +L C+
Sbjct: 685 RDLVTWNAILGA--YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 742
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
L VH + I G + DV V L+++YSKCG + AR LFD M +R V W M+ G
Sbjct: 743 LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 802
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
Y Q G EA +LF +G PD +V +++G + E GKW L D
Sbjct: 803 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDE-GKW---------LADQ 852
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V Y+ S+ D V W ++ C G+ A++ F M
Sbjct: 853 VQA-------YAAKLSLSD--------DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNG 897
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMA 503
L++ + VT L VL A LE G + K V N +N YS M
Sbjct: 898 LNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 953
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC--AK 66
RL K I WN+ + A +A+ LF+ MK + IEP+ ++F I AC A
Sbjct: 1264 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 1323
Query: 67 LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
L+ Y + +H +I + +VD + + A K+ + MP + AS N
Sbjct: 1324 LTSEAY-EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRA 1382
Query: 127 IVG 129
++G
Sbjct: 1383 LLG 1385
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 304/568 (53%), Gaps = 8/568 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I AL LF +M K P T + +C +L + IHG +
Sbjct: 511 WNALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGI 570
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS D V+ + MYAKC L+ A LF++M D+ V SWN MI + Q GF ++ +
Sbjct: 571 KSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMF 630
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G++ VT+M L A + + S+H + I +G+ D SV + I YA
Sbjct: 631 VFKRMIGAGVEVSQVTIMSLPSANANPE------SIHCYTIKVGLADDASVVTSLICMYA 684
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ AEL++ + + + +VS +II + + M +PD +
Sbjct: 685 RYGSTDHAELLYWSLPQ--KNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAM 742
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S+L P + G + H + I G D V N LISMYSK ++++ LF GM +
Sbjct: 743 LSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHE 802
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SW ++ISG Q G A+ LF M+ G PD +T+ S++SGC Q G L+ G+
Sbjct: 803 KPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERL 862
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+Y L+ V ALI MY+KCGSI A +F ++ + + +W MI+G + G
Sbjct: 863 HSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFE 922
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL + +M E + P+++TFL VL ACTH G + +G YF +MTKVY + P L H +C
Sbjct: 923 HKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCAC 982
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M LL R G +EAL F+++M + D+ +WG L AC IH+ +++GEY+A +L+ L+ +
Sbjct: 983 MVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRN 1042
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMK 589
YV M+N+YA+ GRWD VA +R MMK
Sbjct: 1043 GGLYVLMSNLYAVTGRWDDVARVREMMK 1070
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 213/404 (52%), Gaps = 8/404 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
I H++K ++V T ++D+Y K R+ A+ FD MP RDV SWNA+I G+++ G+
Sbjct: 464 IQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGY 523
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
L LF M +G T++GL + + + KS+H FGI G+ D V N
Sbjct: 524 DFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNA 583
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
S YAKC DL+ AE +F + + ++VVSWN++IG FD+++ ++ MI G
Sbjct: 584 LTSMYAKCGDLEAAEYLFEEMMD--KSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVE 641
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
T++SL S+ PE+ +H + I G D SV+ +LI MY++ G D A L
Sbjct: 642 VSQVTIMSLPSANANPES------IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELL 695
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ + + VS TA+I+ YA+ G+L + F M PD V +LS++ G +
Sbjct: 696 YWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHI 755
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+G F YA GL +V N LI MYSK ++ LF + EK ++SW ++I+GC
Sbjct: 756 CIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGC 815
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
G A++LF QM P+ +T ++L C+ G+L+ G
Sbjct: 816 VQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFG 859
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 160/318 (50%), Gaps = 19/318 (5%)
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
I G+D V V + Y K + A F + +R VVSWN++I G +
Sbjct: 469 IKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMP--IRDVVSWNALICGYSRNGYDFS 526
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+L + M+ GF P TT+V LL SC E + QG+ +H GI G LD V N L S
Sbjct: 527 ALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTS 586
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY+KCGD+++A +LF+ M D++ VSW MI Y Q G DEA+ +F M AG VT
Sbjct: 587 MYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVT 646
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++S+ S ++ Y GL D+ V +LI MY++ GS A L+++LP
Sbjct: 647 IMSLPSANANPESIHC------YTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLP 700
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT---------- 471
+K +VS T +I A G ++ F QM +L+++P+ V L++L
Sbjct: 701 QKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHV 760
Query: 472 -HAGFLEKGWGYFNLMTK 488
H ++ G FNL+T
Sbjct: 761 FHGYAIKSGLDTFNLVTN 778
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 12/443 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ I +A+ +F+RM +E + +T + A A + IH
Sbjct: 608 SVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANAN------PESIH 661
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ +K D V T+++ MYA+ D A L+ +P +++ S A+I +A+ G L
Sbjct: 662 CYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLG 721
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
V+ F M + ++ D V ++ + H+ + H + I G+D V N I
Sbjct: 722 LVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLI 781
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S Y+K N+++ +F G+ E + ++SWNS+I GC + ++ + M G PD
Sbjct: 782 SMYSKFNNVEALFGLFSGMHE--KPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPD 839
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ SLLS C L G +HS+ + +++ V LI MY+KCG I A +F
Sbjct: 840 AITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFK 899
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ +W AMISGY+ G +AL + M+ G PD +T L +++ C G +
Sbjct: 900 SIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHE 959
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS--WTTMIAG 434
G ++F + + C ++ + ++ G +A LF EK S W ++
Sbjct: 960 GRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEAL-LFIKNMEKEPDSAVWGAFLSA 1018
Query: 435 CALNGEFVEALDLFHQMMELDLR 457
C ++ E L ++ LD R
Sbjct: 1019 CCIHQEVKLGEYLAKKLYLLDCR 1041
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 323/593 (54%), Gaps = 12/593 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKN----DIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
W + I V + + L RM ++ PN+ T +AC L + +H
Sbjct: 179 WTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLH 238
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G VK+ V +++ MY KCD + A LF ++P++D+ SW ++I + + G E
Sbjct: 239 GFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAE 298
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
K + LF M G+Q D V + L + + K+ H+ + V + N I
Sbjct: 299 KAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALI 358
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNS-IIGGCTYGDKFDDSLNFYRHMIY---DG 253
S YAKC + +A VFR + + R SW+S ++ C G L YR M + D
Sbjct: 359 SMYAKCKQVDIAATVFRMLHQ--RDTDSWSSMVVAYCKAGLDLK-CLELYREMQFRDKDE 415
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F D +++S++SSC L G+ H + I + + SV N LISMY +CG+ D AR
Sbjct: 416 FEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVAR 475
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F + + V+W+A+IS Y+ G +AL L+ M G P+ T++S+IS C
Sbjct: 476 KIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLA 535
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALE G+ ++ GL+ ++ +C AL+DMY KCG +G AR++F ++ E+ VV+W MI+
Sbjct: 536 ALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMIS 595
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G ++GE ++AL LF M +++PN +TFLA+L AC HAG ++KG F M + Y +
Sbjct: 596 GYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE-YSLE 654
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+CM DLLG+ G L+EA D V +MPI+ D GIWGTLL ACK+H N E+G VA +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKK 714
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
F +P + Y+ M+N Y +W+ + LR MMK + V+K G S + I G
Sbjct: 715 AFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 265/549 (48%), Gaps = 24/549 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS +R ++ L RRM+ + P+ T P +A A A+L +H + V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 82 KSPFWS---DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + V +++V MYA+C + A +LFD+MP+RDV +W A+I G G +
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 139 VLCLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L Y +R+V G + + T+ +A LS+ +H FG+ GV SV
Sbjct: 195 GLS--YLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSV 252
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
++ S Y KC+ + A ++F + E + +VSW S+IG + ++ + M
Sbjct: 253 VSSLFSMYTKCDSTEDARILFPELPE--KDLVSWTSLIGAYCRAGHAEKAVELFLGMEES 310
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G +PD + LL+ + G+ H+ + F V + N LISMY+KC +D A
Sbjct: 311 GLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIA 370
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP---DLVTVLSMISGC 369
+F + R SW++M+ Y + G + L L+ M+ + D +++S+IS C
Sbjct: 371 ATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSC 430
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ G L LG+ Y+ +N V NALI MY +CG+ AR++F + K VV+W+
Sbjct: 431 SRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWS 490
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I+ + G +AL L+ QM+ ++PN T ++V+ +C + LE G + K
Sbjct: 491 ALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE-LIHSHVKD 549
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ +L+ + + D+ + G+L A SM ++ D W ++ +H GE
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH-----GEA 603
Query: 550 V-AYRLFEL 557
+ A +LF +
Sbjct: 604 IQALKLFSM 612
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ ++ + W++ I + ALLL+ +M ++PN+ T + +CA L+ +
Sbjct: 480 MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEH 539
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++IH H+ D+ + T +VDMY KC +L A K+FD M +RDV +WN MI G+
Sbjct: 540 GELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGM 599
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G + L LF M ++ + +T + + A HA + + + + ++ ++
Sbjct: 600 HGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKH 659
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+ K L+ AE V + + W +++G C D F+ L +
Sbjct: 660 YACMVDLLGKSGHLQEAEDVVSAMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAK 713
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/599 (33%), Positives = 313/599 (52%), Gaps = 4/599 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMI 76
I W S I+ V N + +AL+LF M+ D + P+ + KAC + S+ Y + +
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H + VK+ S ++V ++++DMY + ++D + ++F +MP R+ +W A+I G G
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ L F M +D T +A + + K++H+ I G + V N+
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y +C +++ +F + E R VVSW S+I + ++ + M P
Sbjct: 251 ATMYTECGEMQDGLCLFENMSE--RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T S+ S+C LV G +H + + G + +SV N+++ MYS CG++ SA LF
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
GM R +SW+ +I GY Q G +E + F M +G P + S++S G +E
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ A GL+ N V ++LI+MYSKCGSI +A +F +VS T MI G A
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G+ EA+DLF + +++ RP+ VTF++VL ACTH+G L+ G+ YFN+M + Y + P
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAK 548
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM DLL R G+L +A + M K D +W TLL ACK +IE G A R+ E
Sbjct: 549 EHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 608
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P A V +ANIY+ G + AN+R MK V K PG S + I F D
Sbjct: 609 LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGD 667
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 5/413 (1%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV--GIQADFVTVMGLT 162
L A ++FDKMP D+ SW ++I + ++ L LF MR+V + D + +
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
+A + +++ +S+H++ + + + V V ++ + Y + + + VF E R
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFS--EMPFRN 173
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+W +II G + ++ + L ++ M D T L +C + G+ +H+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
H I GF + V N+L +MY++CG++ LF+ M +R VSWT++I Y + G +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A+ F M + P+ T SM S C L G+ S GL D++ V N+++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MYS CG++ A LF + + ++SW+T+I G G E F M + +P
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++L + +E G + + + + S + ++ + G +KEA
Sbjct: 414 LASLLSVSGNMAVIEGG-RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 144/315 (45%), Gaps = 30/315 (9%)
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TT +SLL V E +V+ S+ + FD + S + +LI+ G++ +AR +FD
Sbjct: 16 TTSISLLQKPV-EENIVR----ISNQVMVKFDPN-SHLRSLIN----AGNLRAARQVFDK 65
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV--PDLVTVLSMISGCGQSGALE 376
M VSWT++I Y + DEAL LF AM PD + ++ CGQS +
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ YA L +V V ++L+DMY + G I + +F +P + V+WT +I G
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY-FNLMTKVYQVNPE 495
G + E L F +M + + TF L+AC AG + +G + V
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC--AGLRQVKYGKAIHTHVIVRGFVTT 243
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
L + +A + G++++ L ++M + D W +L+ VAY+
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLI--------------VAYKRI 288
Query: 556 ELEPHSAAPYVEMAN 570
E + +++M N
Sbjct: 289 GQEVKAVETFIKMRN 303
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 319/606 (52%), Gaps = 46/606 (7%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC----- 102
N+ + N T P + CA + +H H++++ + D + ++ C
Sbjct: 24 NEQKSNPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFD---PPSATKLFTACALSSP 77
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMGL 161
LD A K+FD++P ++ +WN +I FA + L +F M + + T +
Sbjct: 78 SSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFV 137
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+AA L +++H + +D+ + N+ I Y+ DL A LVF I E +
Sbjct: 138 IKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVE--K 195
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+VSWNS+I G G +++L ++ M + RP+ T+V +LS+C L GR
Sbjct: 196 DIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWAC 255
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ G D+++ + N ++ MY KCG ++ AR LFD M ++ VSWT MI GYA+ GD D
Sbjct: 256 DYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYD 315
Query: 342 EALRLFFAM----------------------EA----------AGEVPDLVTVLSMISGC 369
A R+F M EA P+ VT+ S ++ C
Sbjct: 316 AARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q GA++LG W Y G+K N + +LIDMYSKCG + A E+FY++ + V W+
Sbjct: 376 AQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWS 435
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MIAG A++G A+DLF +M E ++PN VTF +L AC+H+G +++G +FN M V
Sbjct: 436 AMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV 495
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Y V P HY+CM D+LGR G L+EA++ ++ MPI A +WG LL AC+I+ N+E+ E
Sbjct: 496 YGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEM 555
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
RL E + ++ YV ++NIYA G+WD V+ LR MK + ++K PG S + +NG
Sbjct: 556 ACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIH 615
Query: 610 TFTVED 615
F V D
Sbjct: 616 EFLVGD 621
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 224/473 (47%), Gaps = 45/473 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ IR + + LL+F +M ++ PN+ TFPF+ KA ++S L Q IHG +
Sbjct: 98 WNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMV 157
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K+ F SD+F+ +++ Y+ LD AY +F K+ ++D+ SWN+MI GF Q G E+ L
Sbjct: 158 MKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEAL 217
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M++ + + VT++G+ A L + + G+D ++ + N + Y
Sbjct: 218 QLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMY 277
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGD---------------------- 237
KC L+ A +F +EE + +VSW ++I G GD
Sbjct: 278 VKCGSLEDARRLFDKMEE--KDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNAL 335
Query: 238 --------KFDDSLNFYRHM-IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
K ++L +R + + +P+ T+ S L++C A+ G +H + G
Sbjct: 336 ISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQG 395
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
L+ + +LI MYSKCG ++ A +F + R W+AMI+G A G A+ LF
Sbjct: 396 IKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFS 455
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN-----YACSGGLKDNVMVCNALIDM 403
M+ P+ VT +++ C SG ++ G+ F N Y G K ++D+
Sbjct: 456 KMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYA----CMVDI 511
Query: 404 YSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G + +A EL +P S W ++ C + G A +++E D
Sbjct: 512 LGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETD 564
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I V +AL LF+RMK + PN +T + ACAK D + +
Sbjct: 197 IVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACD 256
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA------- 131
+I ++ ++ + M+DMY KC L+ A +LFDKM ++D+ SW MI G+A
Sbjct: 257 YIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDA 316
Query: 132 ------------------------QMGFLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAI 166
Q G ++ L +F ++L + + VT+ A
Sbjct: 317 ARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACA 376
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
+ L +H + G+ + + + I Y+KC L+ A VF +E R V W
Sbjct: 377 QLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVER--RDVFVW 434
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
+++I G +++ + M +P+ T +LL +C + +GRL
Sbjct: 435 SAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRL 487
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/623 (33%), Positives = 321/623 (51%), Gaps = 62/623 (9%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
++ T P + KAC +L + HG I + F S++F+ +V MY++C L+ A +F
Sbjct: 9 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68
Query: 113 DKMPDR---DVASWNAMIVGFAQMGFLEKVLCLFYNMRLV------GIQADFVTVMGLTQ 163
D++ R DV SWN+++ + L LF M L+ ++D ++++ +
Sbjct: 69 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 128
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A K + K VH I G DV V N I AYAKC ++ A VF +E + V
Sbjct: 129 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME--FKDV 186
Query: 224 VSWNSIIGGCTYGDKFD-----------------------------------DSLNFYRH 248
VSWN+++ G + F ++LN +R
Sbjct: 187 VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQ 246
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY----------GFDLDVSVINT 298
MI+ G P+ T++S+LS+C A QG +H++ + G D D+ V N
Sbjct: 247 MIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 306
Query: 299 LISMYSKCGDIDSARFLFDGMC--DRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAG 354
LI MYSKC +AR +FD + +R V+WT MI G+AQ GD ++AL+LF M E G
Sbjct: 307 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 366
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGD 412
P+ T+ ++ C A+ +GK Y D+ V N LI+MYSKCG +
Sbjct: 367 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDT 426
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
AR +F ++ +K+ +SWT+M+ G ++G EALD+F +M + P+ +TFL VL AC+H
Sbjct: 427 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 486
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 532
G +++G YF+ M+ Y + P HY+ DLL R G+L +A V+ MP++ A +W
Sbjct: 487 CGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWV 546
Query: 533 TLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQ 592
LL AC++H N+E+ E+ +L E+ + Y ++NIYA GRW VA +R +MK++
Sbjct: 547 ALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG 606
Query: 593 VKKFPGQSLVHINGKTCTFTVED 615
+KK PG S V T +F V D
Sbjct: 607 IKKRPGCSWVQGQKGTASFFVGD 629
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 238/493 (48%), Gaps = 59/493 (11%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRM------KKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
WNS + V + A AL LF +M K + + ++ I AC L ++
Sbjct: 81 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTK 140
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG+ +++ + D+FV ++D YAKC ++ A K+F+ M +DV SWNAM+ G++Q G
Sbjct: 141 EVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSG 200
Query: 135 FLEKVLCLFYNMRLVGIQADFVT----VMGLTQAAIHAKHL------------------- 171
+ LF NMR I D VT + G +Q + L
Sbjct: 201 NFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTII 260
Query: 172 SLLKSVHSFG-------IHI---------------GVDADVSVCNTWISAYAKCNDLKMA 209
S+L + S G IH G D D+ V N I Y+KC K A
Sbjct: 261 SVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 320
Query: 210 ELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYD--GFRPDVTTVVSLLS 266
+F I R VV+W +IGG YGD +D+L + MI + G P+ T+ +L
Sbjct: 321 RSIFDDIPLEERNVVTWTVMIGGHAQYGDS-NDALKLFVEMISEPYGVAPNAYTISCILM 379
Query: 267 SCVCPEALVQGRLVHSHGI-HYGFDLDVS-VINTLISMYSKCGDIDSARFLFDGMCDRTR 324
+C A+ G+ +H++ + H+ +D V N LI+MYSKCGD+D+AR +FD M ++
Sbjct: 380 ACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSA 439
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDN 383
+SWT+M++GY G EAL +F M AG VPD +T L ++ C G ++ G +FD+
Sbjct: 440 ISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDS 499
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFV 442
+ GL ID+ ++ G + A + +P E T V W +++ C ++
Sbjct: 500 MSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVE 559
Query: 443 EALDLFHQMMELD 455
A ++++E++
Sbjct: 560 LAEHALNKLVEMN 572
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 9/247 (3%)
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ G R D T+ +L +C + G H GF+ +V + N L++MYS+CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 309 IDSARFLFDGMCDR---TRVSWTAMISGYAQKGDLDEALRLFFAM------EAAGEVPDL 359
++ A +FD + R +SW +++S + + + AL LF M + E D+
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+++++++ CG A+ K A G +V V NALID Y+KCG + +A ++F
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ K VVSW M+AG + +G F A +LF M + ++ + VT+ AV+ + G +
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 480 WGYFNLM 486
F M
Sbjct: 241 LNVFRQM 247
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/594 (31%), Positives = 333/594 (56%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I V + E+ +AL LFRRM++ +E N TF +AC + + IH I+
Sbjct: 219 WNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVIL 278
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS ++D++V ++ MYA C +++ A ++F M +D SWN ++ G Q +
Sbjct: 279 KSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAIN 338
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F +M+ G + D V+V+ + A+ + +L VH++ I G+D+++ + N+ I Y
Sbjct: 339 HFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYG 398
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +K F + E + ++SW +II G + D+LN R + + D +
Sbjct: 399 KCCCVKYMGSAFEYMPE--KDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMI 456
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C ++ + +H + + G D+ + N ++++Y + +D AR +F+ +
Sbjct: 457 GSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINS 515
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSWT+MI+ G EAL LF ++ PDL+T++S++ +L+ GK
Sbjct: 516 KDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEI 575
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G ++ N+L+DMY++CG++ +AR +F + ++ ++ WT+MI ++G
Sbjct: 576 HGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCG 635
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+A+DLF +M + ++ P+ +TFLA+L AC+H+G + +G +F +M Y++ P HY+C
Sbjct: 636 KDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYAC 695
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R L+EA FV++MPI+ A +W LL AC+IH N ++GE A +L +L +
Sbjct: 696 LVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTEN 755
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++N +A GRW+ V +R++MK N++KK PG S + + K TF D
Sbjct: 756 SGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARD 809
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 242/464 (52%), Gaps = 5/464 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI WN+ I V +A+ L++ M+ + + TFP + KAC + IH
Sbjct: 112 TIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIH 171
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAMIVGFAQMGF 135
G VK + +FV ++ MYAKC L A LFD M D SWN++I G
Sbjct: 172 GVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGE 231
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M+ VG++++ T + QA + + + +H+ + DV V N
Sbjct: 232 SLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNA 291
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ YA C ++ AE VF+ + + VSWN+++ G D + D++N ++ M G +
Sbjct: 292 LIAMYANCGQMEDAERVFKSML--FKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD +V++++++ L+ G VH++ I +G D ++ + N+LI MY KC +
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSA 409
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M ++ +SWT +I+GYAQ +AL L ++ D + + S++ C +
Sbjct: 410 FEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSE 469
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+L K Y GGL D +++ NA++++Y + + AR +F ++ K +VSWT+MI C
Sbjct: 470 KLIKEIHGYVLKGGLAD-ILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCC 528
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG +EAL+LF+ ++E ++ P+ +T ++VL A L+KG
Sbjct: 529 VHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKG 572
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 234/480 (48%), Gaps = 25/480 (5%)
Query: 1 MAASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPF- 59
M S+LPP + T+ ++ + + EA ++L F D P FP
Sbjct: 1 MLTSTLPP-------NHTLPTFSHR---PISLKEAFQSLTHFF----TDPLPTTTRFPLQ 46
Query: 60 -----IAKACAKLSDFLYSQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFD 113
+ CA Q +H H +K+ + D +F+ T V MY KC A K+FD
Sbjct: 47 QAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFD 106
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
KM +R + +WNAMI G + + L+ MR++G+ D T + +A K L
Sbjct: 107 KMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRL 166
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+H + G V VCN I+ YAKC DL A ++F VSWNSII
Sbjct: 167 GCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAH 226
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+ ++L+ +R M G + T VS L +C P + GR +H+ + DV
Sbjct: 227 VGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDV 286
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V N LI+MY+ CG ++ A +F M + VSW ++SG Q +A+ F M+ +
Sbjct: 287 YVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDS 346
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G+ PD V+VL+MI+ G+S L G YA G+ N+ + N+LIDMY KC +
Sbjct: 347 GQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYM 406
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH--QMMELDLRPNRVTFLAVLQACT 471
F +PEK ++SWTT+IAG A N ++AL+L Q+ ++D+ P + ++L AC+
Sbjct: 407 GSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIG--SILLACS 464
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 134/280 (47%), Gaps = 17/280 (6%)
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARFLFDGMCDRT 323
L C +AL QG+ +H+H + LD ++T + MY KCG A +FD M +RT
Sbjct: 53 LELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT 112
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+W AMI G EA+ L+ M G D T ++ CG LG
Sbjct: 113 IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHG 172
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA--LPEKTVVSWTTMIAGCALNGEF 441
A G V VCNALI MY+KCG +G AR LF + + + VSW ++I+ GE
Sbjct: 173 VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF------NLMTKVYQVNPE 495
+EAL LF +M E+ + N TF++ LQAC F++ G G N T VY N
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNAL 292
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ Y+ G++++A +SM K D W TLL
Sbjct: 293 IAMYA-------NCGQMEDAERVFKSMLFK-DCVSWNTLL 324
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S I W S I V A +AL LF + + +IEP+ +T + A A LS +
Sbjct: 515 SKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKE 574
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IHG +++ F+ + + ++VDMYA+C ++ A +F+ + RD+ W +MI G
Sbjct: 575 IHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGC 634
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKS 176
+ + LF M + D +T + L A H+ +H ++K+
Sbjct: 635 GKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKN 682
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 323/593 (54%), Gaps = 12/593 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKN----DIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
W + I V + + L RM ++ PN+ T +AC L + +H
Sbjct: 179 WTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLH 238
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G VK+ V +++ MY KCD + A LF ++P++D+ SW ++I + + G E
Sbjct: 239 GFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAE 298
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
K + LF M G+Q D V + L + + K+ H+ + V + N I
Sbjct: 299 KAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALI 358
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNS-IIGGCTYGDKFDDSLNFYRHMIY---DG 253
S YAKC + +A VFR + + R SW+S ++ C G L YR M + D
Sbjct: 359 SMYAKCKQVDIAATVFRMLHQ--RDTDSWSSMVVAYCKAGLDLK-CLELYREMQFRDKDE 415
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F D +++S++SSC L G+ H + I + + SV N LISMY +CG+ D AR
Sbjct: 416 FEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVAR 475
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F + + V+W+A+IS Y+ G +AL L+ M G P+ T++S+IS C
Sbjct: 476 KIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLA 535
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALE G+ ++ GL+ ++ +C AL+DMY KCG +G AR++F ++ E+ VV+W MI+
Sbjct: 536 ALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMIS 595
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G ++GE ++AL LF M +++PN +TFLA+L AC HAG ++KG F M + Y +
Sbjct: 596 GYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE-YSLE 654
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+CM DLLG+ G L+EA D V +MPI+ D GIWGTLL ACK+H N E+G VA +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKK 714
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
F +P + Y+ M+N Y +W+ + LR MMK + V+K G S + I G
Sbjct: 715 AFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 265/549 (48%), Gaps = 24/549 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS +R ++ L RRM+ + P+ T P +A A A+L +H + V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 82 KSPFWS---DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + V +++V MYA+C + A +LFD+MP+RDV +W A+I G G +
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 139 VLCLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L Y +R+V G + + T+ +A LS+ +H FG+ GV SV
Sbjct: 195 GLS--YLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSV 252
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
++ S Y KC+ + A ++F + E + +VSW S+IG + ++ + M
Sbjct: 253 VSSLFSMYTKCDSTEDARILFPELPE--KDLVSWTSLIGAYCRAGHAEKAVELFLGMEES 310
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G +PD + LL+ + G+ H+ + F V + N LISMY+KC +D A
Sbjct: 311 GLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIA 370
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP---DLVTVLSMISGC 369
+F + R SW++M+ Y + G + L L+ M+ + D +++S+IS C
Sbjct: 371 ATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSC 430
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ G L LG+ Y+ +N V NALI MY +CG+ AR++F + K VV+W+
Sbjct: 431 SRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWS 490
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I+ + G +AL L+ QM+ ++PN T ++V+ +C + LE G + K
Sbjct: 491 ALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG-ELIHSHVKD 549
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ +L+ + + D+ + G+L A SM ++ D W ++ +H GE
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH-----GEA 603
Query: 550 V-AYRLFEL 557
+ A +LF +
Sbjct: 604 IQALKLFSM 612
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ ++ + W++ I + ALLL+ +M ++PN+ T + +CA L+ +
Sbjct: 480 MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEH 539
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++IH H+ D+ + T +VDMY KC +L A K+FD M +RDV +WN MI G+
Sbjct: 540 GELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGM 599
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G + L LF M ++ + +T + + A HA + + + + ++ ++
Sbjct: 600 HGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKH 659
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+ K L+ AE V + + W +++G C D F+ L +
Sbjct: 660 YACMVDLLGKSGHLQEAEDVVSAMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAK 713
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 300/559 (53%), Gaps = 5/559 (0%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TF + K CA +D + +H + S+ T + +MY KC R A ++FD+M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR--LVGIQADFVTVMGLTQAAIHAKHLSL 173
P RD +WNA++ G+A+ G + M+ G + D VT++ + A A+ L
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ VH+F + G+D V+V + AY KC ++ A VF + +R VSWN++I G
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP--VRNSVSWNAMIDGY 195
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+++ + M+ +G +V++ L +C L + R VH + G +V
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNV 255
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDR-TRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
SV N LI+ Y+KC D A +F+ + ++ TR+SW AMI G+ Q ++A RLF M+
Sbjct: 256 SVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQL 315
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
PD T++S+I +W Y+ L +V V ALIDMYSKCG +
Sbjct: 316 ENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSI 375
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
AR LF + ++ V++W MI G +G A++LF +M PN TFL+VL AC+H
Sbjct: 376 ARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSH 435
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 532
AG +++G YF M K Y + P + HY M DLLGR GKL EA F+++MPI+ ++G
Sbjct: 436 AGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYG 495
Query: 533 TLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQ 592
+L ACK+H+N+E+ E A +FEL P +V +ANIYA W VA +RT M++
Sbjct: 496 AMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKG 555
Query: 593 VKKFPGQSLVHINGKTCTF 611
++K PG S++ + + TF
Sbjct: 556 LQKTPGWSIIQLKNEVHTF 574
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 245/524 (46%), Gaps = 25/524 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN+ + A+ RM+ + P+++T + ACA + +H
Sbjct: 85 WNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAF 144
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+++ + V T ++D Y KC ++ A +FD MP R+ SWNAMI G+A G +
Sbjct: 145 ALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEA 204
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF+ M G+ +V+ QA +L ++ VH + +G+ ++VSV N I+
Sbjct: 205 MALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITT 264
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC +A VF + +T +SWN++I G T + +D+ + M + RPD
Sbjct: 265 YAKCKRADLAAQVFNELGNK-KTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSF 323
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+VS++ + +Q R +H + I + D DV V+ LI MYSKCG + AR LFD
Sbjct: 324 TLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSA 383
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
DR ++W AMI GY G A+ LF M+ G +P+ T LS+++ C +G ++ G
Sbjct: 384 RDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQ 443
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
K+F + GL+ + ++D+ + G + +A +P E + + M+ C L
Sbjct: 444 KYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKL 503
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTF----------------LAVLQACTHAGFLEK--G 479
+ + VE + Q++ +L P + +A ++ L+K G
Sbjct: 504 H-KNVELAEESAQII-FELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPG 561
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
W L +V+ ++ D+ R KL E + + +P
Sbjct: 562 WSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVP 605
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 2/236 (0%)
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P + T +LL C L GR VH+ G + L +MY KC AR +
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSG 373
FD M R RV+W A+++GYA+ G A+ M E GE PD VT++S++ C +
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
AL + +A GL + V V A++D Y KCG++ AR +F +P + VSW MI
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
G A NG EA+ LF +M++ + + LA LQAC G+L++ L+ +V
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV 249
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N++ T WN+ I A LF RM+ ++ P++ T + A A +SD
Sbjct: 278 FNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISD 337
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
L ++ IHG+ ++ D++V T ++DMY+KC R+ A +LFD DR V +WNAMI G
Sbjct: 338 PLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ GF + + LF M+ G + T + + A HA
Sbjct: 398 YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 312/580 (53%), Gaps = 6/580 (1%)
Query: 30 VDKNEAHKALLLFRRMKKN--DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS 87
VD A+ L R M++ ++ KAC + +DF Y + +H +VK+ +
Sbjct: 97 VDAGSHADAVALHRDMRRRCPAAAQADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GA 155
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D FV ++VDMYAK L+ A K+FD++P+R+V SW +M+ G Q G E+ L LF MR
Sbjct: 156 DGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMR 215
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+ T++ + A L + +H I G+ + + + + YAKC ++
Sbjct: 216 QDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVE 275
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A VF +E +V W ++I G T + D+L + H + P+ T+ +++S+
Sbjct: 276 DARRVFDELE--FVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISA 333
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
L GR VH+ G+ G V N L+ MY+KC + A +F + + V+W
Sbjct: 334 SAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAW 393
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
+M++GY++ G +E+L LF M G PD ++V++ +S C L +GK F YA
Sbjct: 394 NSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIK 453
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
N+ V AL+++YSKC + A+ +F + ++ V+W+ MI G + G+ ++DL
Sbjct: 454 YAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDL 513
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F++M++ ++ PN V F ++L AC+H G + G YF+ M + + + P + HY+CM D++
Sbjct: 514 FNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMA 573
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
R G L+EAL+F+Q+MPIK+ +WG+ L CK+H +E GE ++ L P + YV
Sbjct: 574 RAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVL 633
Query: 568 MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV-HING 606
M+N+Y GRWD +R M+ + K PG S V H NG
Sbjct: 634 MSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCSSVGHENG 673
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/427 (31%), Positives = 232/427 (54%), Gaps = 6/427 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W S + ++ A + L+LF M+++++ P+ T + ACA L + IHG +
Sbjct: 190 SWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSV 249
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K ++ F+ +++DMYAKC++++ A ++FD++ D+ W AMIVG+ Q L
Sbjct: 250 IKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDAL 309
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF + + V I + VT+ + A+ +HL L +SVH+ G+ +G V N + Y
Sbjct: 310 QLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMY 369
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC L A +F I ++ VV+WNS++ G + ++SL + M G PD +
Sbjct: 370 AKCQALPEANSIFGRIL--IKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAIS 427
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VV+ LS+CVC L G+ H++ I Y F ++ V L+++YSKC D+ SA+ +F+ M
Sbjct: 428 VVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMT 487
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK- 379
DR V+W+AMI GY +GD ++ LF M P+ V S++S C +G + GK
Sbjct: 488 DRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKE 547
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
+FD+ A + ++ ++D+ ++ G++ +A E +P K +S W + + GC L+
Sbjct: 548 YFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLH 607
Query: 439 G--EFVE 443
EF E
Sbjct: 608 SRLEFGE 614
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME---AAGE 355
L+S Y+ GD+ SAR + DG ++ M+ G +A+ L M A
Sbjct: 61 LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
D+V L++ C +S G+ G D V N+L+DMY+K G + +AR+
Sbjct: 121 QADVVLSLAL-KACVRSADFRYGRRLHCDVVKAGGADG-FVMNSLVDMYAKAGDLENARK 178
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F +PE+ VVSWT+M++G NG E L LF++M + ++ P+ T ++VL AC G
Sbjct: 179 VFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGG 238
Query: 476 LEKG 479
L +G
Sbjct: 239 LHQG 242
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 311/571 (54%), Gaps = 13/571 (2%)
Query: 52 PNNLTFPFIAKACA-----KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLD 106
P++ +F F A + + + +D ++ +HG V + + +D FV + + +Y K R D
Sbjct: 107 PDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGD 166
Query: 107 CAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAA 165
A K+FD +P D WN ++ G LE F M G ++ D T+ +AA
Sbjct: 167 DARKVFDTVPSPDTILWNTLLAGLPGSEALEA----FVRMVDAGRVRPDSTTLASSLRAA 222
Query: 166 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
A H+++ + VH +G+ G+ V +S Y+KC D+ A+ +F ++ +V+
Sbjct: 223 AEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNP--DLVA 280
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
+N++I G + + S+ ++ + G+RP+ +T+V+++ + R +H+ +
Sbjct: 281 YNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVV 340
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
D D V L ++Y + D++SAR +FD M ++T SW AMISGYAQ G + A+
Sbjct: 341 KARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVA 400
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LF M+ P+ +T+ S +S C GAL LGKW L+ NV V ALIDMY+
Sbjct: 401 LFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYA 460
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCGSI +AR +F + K VVSW MI+G L+G+ EAL L+ M++ + P TFL+
Sbjct: 461 KCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLS 520
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
V+ AC+H G +++G F +MT Y++ P + H +CM DLLGR GKL EAL+ + P
Sbjct: 521 VIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQS 580
Query: 526 S-DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ G+WG LL AC +H+N ++ + + +LFEL+ +A YV ++N+Y + A +
Sbjct: 581 AIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVV 640
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R K ++ K PG +L+ I + F D
Sbjct: 641 RQEAKTRKLVKTPGCTLIEIGDRPHVFMAGD 671
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 16/441 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + +EA +A + R + + P++ T +A A+ S + +HG+ V
Sbjct: 183 WNTLL-AGLPGSEALEAFV--RMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGV 239
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K V T ++ +Y+KC +D A LFD+M + D+ ++NA+I G++ G +E +
Sbjct: 240 KCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVE 299
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF + G + + T++ + H L + +H+F + +DAD V + Y
Sbjct: 300 LFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYC 359
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ ND++ A +F + E +T+ SWN++I G + ++ ++ M +P+ T+
Sbjct: 360 RLNDMESARSIFDAMLE--KTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITI 417
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S LS+C AL G+ VH +L+V V+ LI MY+KCG I AR +FD M +
Sbjct: 418 SSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDN 477
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-- 379
+ VSW AMISGY G EAL+L+ M A +P T LS+I C G ++ G+
Sbjct: 478 KNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKV 537
Query: 380 ---WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS--WTTMIAG 434
+ Y + G++ C ++D+ + G + +A EL P+ + W ++
Sbjct: 538 FRVMTNEYRITPGIEH----CTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGA 593
Query: 435 CALNGEFVEALDLFHQMMELD 455
C ++ A ++ ELD
Sbjct: 594 CMVHKNSDLAKLASQKLFELD 614
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I A+ LF+ M++ +++PN +T ACA L + +H
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVH 437
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I K +++V T ++DMYAKC + A +FD+M +++V SWNAMI G+ G
Sbjct: 438 RIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGA 497
Query: 138 KVLCLFYNM---RLVGIQADFVTVM 159
+ L L+ +M R++ + F++V+
Sbjct: 498 EALKLYKDMLDARILPTSSTFLSVI 522
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/565 (35%), Positives = 297/565 (52%), Gaps = 5/565 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I+ VDK AL +F M P+ TFP + KAC+ +S +IHG
Sbjct: 151 WNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRA 210
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ S F S++FVQ +++ MY C ++ A ++F+ M R V SWN MI G+ Q G E+ L
Sbjct: 211 LVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEAL 270
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M ++ D T++ + H K L L VH + + V N + Y
Sbjct: 271 AVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMY 330
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++C + A LVF +E + V++W S+I G +L M DG P+ T
Sbjct: 331 SRCGGMDEASLVFAETKE--KDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ SLLS+C L QG+ +H+ + D DV V+ LI MY+KC + + +F
Sbjct: 389 LASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTS 448
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ V W A++SG EA+ LF +M + T S+I L+
Sbjct: 449 MKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMN 508
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALN 438
+Y G + V LIDMYSKCGS+ A ++F +P EK ++ W+ +IAG ++
Sbjct: 509 LHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 568
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G A+ LF+QM+ ++PN +TF +VL AC+H G ++ G F M + Y +P NH
Sbjct: 569 GHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNH 628
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ DLLGR G+L EA D ++SMP + + IWG LL AC IH+N+E+GE A RLFELE
Sbjct: 629 YTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELE 688
Query: 559 PHSAAPYVEMANIYALGGRWDGVAN 583
P S Y+ +ANIYA GRW N
Sbjct: 689 PESTGNYILLANIYAAVGRWKDAEN 713
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 233/494 (47%), Gaps = 12/494 (2%)
Query: 73 SQMIHGHIVKSPFWSD---IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
++++HGH + S I + + + YA C + A KLFD + D + WNA+I
Sbjct: 98 TKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKM 157
Query: 130 FAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ GF L +F +M G D T + +A L++ +H + G +
Sbjct: 158 YVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSS 217
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
++ V N+ ++ Y C + +A VF + + R+VVSWN++I G + +++L +
Sbjct: 218 NMFVQNSLLAMYMNCGKVGLARQVFNVMLK--RSVVSWNTMISGWFQNGRPEEALAVFNS 275
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ PD T+VS L SC + L G VH + V N L+ MYS+CG
Sbjct: 276 MMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGG 335
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+D A +F ++ ++WT+MI+GY G+ AL L AM+ G VP+ VT+ S++S
Sbjct: 336 MDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSA 395
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C L+ GK + L +V+V ALIDMY+KC ++ + ++F K V W
Sbjct: 396 CASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPW 455
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+++G N EA+ LF M+ ++ N TF +V+ A L++ + + +
Sbjct: 456 NALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVR 515
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS-DAGIWGTLLCACKIHRNIEIG 547
++ ++ + + D+ + G L A +P K D +W L+ +H + E
Sbjct: 516 SGFIS-KIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE-- 572
Query: 548 EYVAYRLFELEPHS 561
A LF HS
Sbjct: 573 --TAVLLFNQMVHS 584
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 213/445 (47%), Gaps = 25/445 (5%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ I +AL +F M +EP++ T +C L + +H
Sbjct: 249 SVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVH 308
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ K+ I V+ +VDMY++C +D A +F + ++DV +W +MI G+ G +
Sbjct: 309 KLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAK 368
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L L M+L G+ + VT+ L A L KS+H++ + +D+DV V I
Sbjct: 369 SALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALI 428
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKCN + + VF + ++ V WN+++ G + + +++ ++ M+ + +
Sbjct: 429 DMYAKCNAVSYSFQVFA--KTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 486
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T S++ + L Q +HS+ + GF ++VI LI MYSKCG +D A +FD
Sbjct: 487 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 546
Query: 318 GMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG-- 373
+ ++ + + W+ +I+GY G + A+ LF M +G P+ +T S++ C G
Sbjct: 547 EIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLV 606
Query: 374 --ALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWT 429
L L K+ +NY S N C ++D+ + G + +A +L ++P ++ W
Sbjct: 607 DDGLTLFKYMIENYPSSP--LPNHYTC--VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWG 662
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL 454
++ C L HQ +EL
Sbjct: 663 ALLGAC-----------LIHQNVEL 676
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 167/352 (47%), Gaps = 21/352 (5%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC-TYGDKFDDS-----LNFYR 247
N ++ A +MA G E+ +V+ + I G C + + +S L+ +
Sbjct: 18 NAMVAVVALIKKTEMA----NGSEQRHHSVLLLDKIYGDCGDFRNNLSNSNTTKALSKSK 73
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT---LISMYS 304
+I + R D SLL +L + +++H H I G + I+ L Y+
Sbjct: 74 SLIANVHRCD-----SLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYA 128
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVL 363
CG + AR LFD + D + W A+I Y KG +ALR+F +M +G+ PD T
Sbjct: 129 FCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFP 188
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+I C L +G A G N+ V N+L+ MY CG +G AR++F + ++
Sbjct: 189 LVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKR 248
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
+VVSW TMI+G NG EAL +F+ MM+ + P+ T ++ L +C H LE G
Sbjct: 249 SVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVH 308
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L+ K + + ++ + + D+ R G + EA V + + D W +++
Sbjct: 309 KLVQKNH-LQEKIEVRNALVDMYSRCGGMDEA-SLVFAETKEKDVITWTSMI 358
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 307/583 (52%), Gaps = 8/583 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + A+ LF M + + +PN T + +C + IHG +
Sbjct: 125 WNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGI 184
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F D + ++ MYAKCD L+ + LFD+M ++ V SWN MI + Q G +K +
Sbjct: 185 KAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAIL 244
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M G VT+M L A + ++VH + + G D SV + + YA
Sbjct: 245 YFKEMLKEGFHPSSVTIMNLVSAN------AFPENVHCYVVKCGFTNDASVVTSLVCLYA 298
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K A+ +++ + +++ +II + + ++ + I +PD +
Sbjct: 299 KQGFTNTAKQLYKYYPT--KDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVAL 356
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +L P G H +G+ G D V N LIS+YS+ +I++A LF M +
Sbjct: 357 IGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMRE 416
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ ++W +MISG Q G +A+ LF M G+ PD +T+ S++SGC Q G L +G+
Sbjct: 417 KPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETL 476
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+Y ++ + ALIDMYSKCG + A ++FY + + + +W +I+G +L G
Sbjct: 477 HSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLE 536
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A + ++ E L+P+++TFL VL ACTH G + G YFN+MTK Y + P L HY+C
Sbjct: 537 HTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYAC 596
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ LLG++G KEA++F+ M I+ D+ +WG LL AC I R +++GE +A +LF L +
Sbjct: 597 IVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKN 656
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
YV M+N+YA+ GRWD VA +R MMK + G S++ +
Sbjct: 657 GGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCSGVSVIDV 699
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 247/465 (53%), Gaps = 16/465 (3%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF--------LYSQ 74
N + ++ +N AL++FR++ + ++ PN TF + KA F L ++
Sbjct: 17 NLSLFHSLFQNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQAR 76
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
I +K I V T+++D+Y K A +FD+M RDV SWN +I G++Q G
Sbjct: 77 QIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNG 136
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+L + LF +M + + T++ L + + + +S+H FGI G D + N
Sbjct: 137 YLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNN 196
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S YAKC+DL+ ++L+F ++E ++VVSWN++IG FD ++ +++ M+ +GF
Sbjct: 197 ALMSMYAKCDDLEASQLLFDEMDE--KSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGF 254
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P T+++L+S+ PE VH + + GF D SV+ +L+ +Y+K G ++A+
Sbjct: 255 HPSSVTIMNLVSANAFPEN------VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQ 308
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
L+ + ++ TA+IS Y++KGD++ A+ F PD V ++ ++ G
Sbjct: 309 LYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSH 368
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+G F Y GL ++ +V N LI +YS+ I A LFY + EK +++W +MI+G
Sbjct: 369 FAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISG 428
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
C G+ +A++LF +M +P+ +T ++L C G L G
Sbjct: 429 CVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIG 473
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 202/432 (46%), Gaps = 48/432 (11%)
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
GV+ + V + I Y K A +F + R VVSWN +I G + ++
Sbjct: 86 GVNQFIHVHTSLIDLYMKLGFTSHARNMFD--QMSYRDVVSWNVLICGYSQNGYLYHAIQ 143
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+ M+ + F+P+ TT+VSLL SC C E + QGR +H GI GF LD + N L+SMY+
Sbjct: 144 LFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYA 203
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KC D+++++ LFD M +++ VSW MI Y Q G D+A+ F M G P VT+++
Sbjct: 204 KCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMN 263
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++S A + Y G ++ V +L+ +Y+K G A++L+ P K
Sbjct: 264 LVS------ANAFPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKD 317
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ----------ACTHAG 474
+++ T +I+ + G+ A++ F Q ++LD++P+ V + VL CT G
Sbjct: 318 LITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHG 377
Query: 475 FLEKGW---------GYFNLMTKVYQVNPELNHY-----------SCMADLLGRKGKLKE 514
+ K G +L ++ ++ L+ + + M + GK +
Sbjct: 378 YGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSD 437
Query: 515 ALDFVQSMPI---KSDAGIWGTLLCACKIHRNIEIGE----YVAYRLFELEPHSAAPYVE 567
A++ M + K DA +LL C N+ IGE Y+ +E ++
Sbjct: 438 AMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALID 497
Query: 568 MANIYALGGRWD 579
M Y+ GR D
Sbjct: 498 M---YSKCGRLD 506
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 35/322 (10%)
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCV-------CPE-ALVQGRLVHSHGIHYGFDLDV 293
+L +R ++ P+ T L+ + + CP A +Q R + + + G + +
Sbjct: 32 ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKRGVNQFI 91
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V +LI +Y K G AR +FD M R VSW +I GY+Q G L A++LF M
Sbjct: 92 HVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRE 151
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
P+ T++S++ CG + G+ + G + + NAL+ MY+KC + +
Sbjct: 152 NFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEAS 211
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA---- 469
+ LF + EK+VVSW TMI NG F +A+ F +M++ P+ VT + ++ A
Sbjct: 212 QLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFP 271
Query: 470 ------CTHAGF------------LEKGWGYFNLMTKVYQVNP--ELNHYSCMADLLGRK 509
GF L G+ N ++Y+ P +L + + K
Sbjct: 272 ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEK 331
Query: 510 GKLKEALD-FVQS--MPIKSDA 528
G ++ A++ F+Q+ + IK DA
Sbjct: 332 GDIESAVECFIQTIQLDIKPDA 353
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 2/261 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+L K Y + + + I +K + A+ F + + DI+P+ + + S
Sbjct: 308 QLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPS 367
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
F HG+ VKS +D V ++ +Y++ D ++ A LF M ++ + +WN+MI
Sbjct: 368 HFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMIS 427
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G Q G + LF M + G + D +T+ L +L + +++HS+ + V
Sbjct: 428 GCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRV 487
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + I Y+KC L AE VF I++ + +WN+II G + + Y
Sbjct: 488 EDFIGTALIDMYSKCGRLDYAEKVFYNIKD--PCLATWNAIISGYSLYGLEHTAFGCYSK 545
Query: 249 MIYDGFRPDVTTVVSLLSSCV 269
+ G +PD T + +L++C
Sbjct: 546 LQEQGLKPDKITFLGVLAACT 566
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WNS I V ++ A+ LF M +P+ +T + C +L + +
Sbjct: 415 REKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGE 474
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +I+++ + F+ T ++DMY+KC RLD A K+F + D +A+WNA+I G++ G
Sbjct: 475 TLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYG 534
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ ++ G++ D +T +G+ A H
Sbjct: 535 LEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHG 568
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 314/591 (53%), Gaps = 64/591 (10%)
Query: 89 IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL 148
+F ++ YAK RL+ A+++F++MP+ D SW AMIVG+ QMG E + +F M
Sbjct: 79 VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138
Query: 149 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKM 208
+ T+ + + + L + + VHSF + G+ + +SV N+ ++ YAK D
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198
Query: 209 AELVF----------------RGIEEGL-------------RTVVSWNSIIGGCTYGDKF 239
A++VF ++ GL R VVSWN++I G
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFD 258
Query: 240 DDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
++L+ + M+ D +PD T+ S LS+C E L G+ +H+H I FD +V N
Sbjct: 259 REALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNA 318
Query: 299 LISMYSKCG---------------------------------DIDSARFLFDGMCDRTRV 325
LISMYSK G DI+ AR +FD + R V
Sbjct: 319 LISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVV 378
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
+WTAMI GY Q G +A+ LF +M G P+ T+ +M+S +L+ G+ A
Sbjct: 379 AWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASA 438
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEA 444
G +V V NALI MY+K GSI DAR +F + ++ ++WT+MI A +G EA
Sbjct: 439 TRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEA 498
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L LF +M+E ++P+ +T++ VL ACTH G +E+G Y+NLM +++ P +HY+CM D
Sbjct: 499 LTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMID 558
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
L GR G L+EA F+++MPI+ D WG+LL +CK+H+N+E+ E A RL +EP ++
Sbjct: 559 LFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGA 618
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y +AN+Y+ G+W+ AN+R MK VKK G S V I K F V+D
Sbjct: 619 YSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDD 669
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 217/503 (43%), Gaps = 94/503 (18%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + A+ +FR M +D+ P T + +CA + + +H +V
Sbjct: 113 WTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVV 172
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW------------------ 123
K S I V ++++MYAK A +FD+M + +SW
Sbjct: 173 KHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQV 232
Query: 124 -------------NAMIVGFAQMGFLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAK 169
NAMI G+ Q GF + L +F M + + D T+ A + +
Sbjct: 233 QFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLE 292
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE-------------LVFRGI 216
+L L K +H+ I D +V N IS Y+K +++A+ + F +
Sbjct: 293 NLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTAL 352
Query: 217 EEG------------------LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
+G +R VV+W ++I G D++ +R MI +G +P+
Sbjct: 353 LDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNN 412
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ ++LS +L GR +H+ G VSV N LI+MY+K G I+ AR++F+
Sbjct: 413 YTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNL 472
Query: 319 M-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R ++WT+MI AQ G +EAL LF M G PD +T + ++S C G +E
Sbjct: 473 IHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQ 532
Query: 378 GKWFDN--------------YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-E 422
G+ + N YAC +ID++ + G + +A +P E
Sbjct: 533 GRSYYNLMQNAHKIIPTPSHYAC-------------MIDLFGRAGLLQEAHAFIENMPIE 579
Query: 423 KTVVSWTTMIAGCAL--NGEFVE 443
V++W +++A C + N E E
Sbjct: 580 PDVIAWGSLLASCKVHKNVELAE 602
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 175/441 (39%), Gaps = 75/441 (17%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I +AL +F +M + +P+ T ACA L + + IH HI
Sbjct: 245 WNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHI 304
Query: 81 VKSPFWS---------------------------------DIFVQTTMVDMYAKCDRLDC 107
+++ F + D+ T ++D Y K ++
Sbjct: 305 IRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINP 364
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A ++FD + RDV +W AMIVG+ Q GF + + LF +M G + + T+ + +
Sbjct: 365 ARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSS 424
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
L + +H+ G + VSV N I+ YAK + A VF I R ++W
Sbjct: 425 LASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWK-RDTITWT 483
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
S+I +++L + M+ +G +PD T V +LS+C + QGR +Y
Sbjct: 484 SMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRS------YY 537
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
+ I S Y+ MI + + G L EA
Sbjct: 538 NLMQNAHKIIPTPSHYA------------------------CMIDLFGRAGLLQEAHAFI 573
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL---KDNVMVCNALIDMY 404
M PD++ S+++ C +EL + A L +N +AL ++Y
Sbjct: 574 ENMPIE---PDVIAWGSLLASCKVHKNVELAE----VAAERLLLIEPENSGAYSALANVY 626
Query: 405 SKCGSIGDARELFYALPEKTV 425
S CG +A + ++ +K V
Sbjct: 627 SACGQWENAANIRKSMKDKGV 647
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 115/270 (42%), Gaps = 71/270 (26%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ +H+ I G L V ++N L++ Y+K G I A +FD M ++ SW ++SGYA+
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE-------------------- 376
G L+EA R+F M PD V+ +MI G Q G E
Sbjct: 92 GGRLEEAHRVFEEMPE----PDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFT 147
Query: 377 ---------------LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS------------ 409
+G+ ++ GL + V N+L++MY+K G
Sbjct: 148 LTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMK 207
Query: 410 -------------------IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ A+ F + E+ VVSW MI+G +G EALD+F +
Sbjct: 208 LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSK 267
Query: 451 M-MELDLRPNRVTFLAVLQACTHAGFLEKG 479
M M+ +P++ T + L AC + L+ G
Sbjct: 268 MLMDSSSKPDKFTLASALSACANLENLKLG 297
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+V N ++ Y+K G + +A +F +PE VSWT MI G G+F A+ +F +M+
Sbjct: 78 SVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
D+ P + T VL +C L G + + K + ++ ++ + + ++ + G
Sbjct: 138 SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVK-HGLSSYISVANSLLNMYAKSGDP 196
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCA 537
A M +KS + W T++ +
Sbjct: 197 VTAKIVFDRMKLKSTSS-WNTMISS 220
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 319/595 (53%), Gaps = 4/595 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N IR D AL +R M P+ TFP + K CA+L + H ++
Sbjct: 76 NVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIR 135
Query: 83 -SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S+++ +++ YAK + A ++FD MP RD+ +WN+M+ G+ G L
Sbjct: 136 LGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALD 195
Query: 142 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M + +Q D V ++ A L + VH++ I G++ DV V + + Y
Sbjct: 196 CFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMY 255
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC + AE +F + RTVV+WN +IGG +++ + + M +G + +V T
Sbjct: 256 CKCGAIASAEGMFATMPS--RTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVT 313
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++LL++C E+ + GR VH + F V + L+ MYSK G + S+ +F M
Sbjct: 314 AINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMT 373
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++T VSW MI+ Y K +EA+ LF + PD T+ +++ G L +
Sbjct: 374 NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQ 433
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+Y +N +V NA++ MY++CG + +R++F + K V+SW T+I G A++G+
Sbjct: 434 MHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQ 493
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL++F +M L+PN TF++VL AC+ +G ++GW FNLM + Y + P++ HY
Sbjct: 494 GKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYG 553
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G L+E L F++S+PI IWG+LL A + +I+I EY A R+FELE
Sbjct: 554 CMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHD 613
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++++YA GRW+ V +R+ M +++ +S+V ++G +C+F D
Sbjct: 614 NTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGD 668
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 54/348 (15%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ WN+ I + K ++A+ LF + + P+ T + A L +
Sbjct: 374 NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQ 433
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H +IV+ + + V ++ MYA+C + + K+FDKM +DV SWN +I+G+A G
Sbjct: 434 MHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQ 493
Query: 136 LEKVLCLFYNMRLVGIQAD---FVTVM-----------GLTQAAIHAKHLSLLKSVHSFG 181
+ L +F M+ G+Q + FV+V+ G Q + + ++ + +G
Sbjct: 494 GKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYG 553
Query: 182 I-------------------HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
I + + + ++A ND+ +AE I E L
Sbjct: 554 CMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFE-LEH 612
Query: 223 VVSWNSIIGGCTYGD--KFDDSLNFYRHMIYDGF-RPDVTTVVSLL-SSCVCPEALVQGR 278
+ +I Y D +++D M+ G R D ++V L SSC + V G
Sbjct: 613 DNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSC----SFVNGD 668
Query: 279 LVH--SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
+ H S IH D+ + K G+ D R L D + +R
Sbjct: 669 MTHPQSKTIHEVSDV----------LSRKIGETDYPRNLSDPISLTSR 706
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/579 (34%), Positives = 312/579 (53%), Gaps = 41/579 (7%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYA--KCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH ++++ + D F + ++ A LD A ++FD++P ++ +WN +I +A
Sbjct: 52 KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111
Query: 132 QMGFLEKVLCLFYNMRLVGIQADF---VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ L +F +R++ DF T L +AA + L K+ H I + + +
Sbjct: 112 SSSNPHQSLLIF--LRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV + N+ I YAKC +L + VF I R VVSWNS+I G +++L ++
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNIPR--RDVVSWNSMITAFVQGGCPEEALELFQE 227
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +P+ T+V +LS+C GR VHS+ +++ N ++ MY+KCG
Sbjct: 228 METQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGS 287
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD--------------------------- 341
++ A+ LFD M ++ VSWT M+ GYA+ G+ D
Sbjct: 288 VEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQC 347
Query: 342 ----EALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
EAL LF ++ + PD VT++S +S C Q GA++LG W Y G+K N +
Sbjct: 348 GKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHL 407
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
+LIDMY KCG + A +F+++ K V W+ MIAG A++G +A+ LF +M E +
Sbjct: 408 TTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKV 467
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
+PN VTF +L AC+H G +E+G +FN M VY V P + HY+CM D+LGR G L+EA+
Sbjct: 468 KPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAV 527
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
+ ++ MP+ A +WG LL AC IH N+ + E +L ELEP + YV ++NIYA G
Sbjct: 528 ELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAG 587
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+WD V+ LR +M+ +KK PG S + ++G F V D
Sbjct: 588 KWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGD 626
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 231/496 (46%), Gaps = 41/496 (8%)
Query: 1 MAASSLPPRLNKIYRSSTINQ--------WNSQIREAVDKNEAHKALLLFRRMKKNDIE- 51
+ A++L P + Y +Q WN+ IR + H++LL+F RM +
Sbjct: 74 ITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDF 133
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P+ TFPF+ KA ++L + + HG ++K SD+F+ +++ YAKC L Y++
Sbjct: 134 PDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRV 193
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
F +P RDV SWN+MI F Q G E+ L LF M ++ + +T++G+ A
Sbjct: 194 FVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDF 253
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF------------------ 213
+ VHS+ + +++ N + Y KC ++ A+ +F
Sbjct: 254 EFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGY 313
Query: 214 ---------RGIEEGL--RTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYDGFRPDVTTV 261
+GI + + + + +WN++I K ++L + + + +PD T+
Sbjct: 314 AKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTL 373
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS LS+C A+ G +H + G L+ + +LI MY KCGD+ A +F +
Sbjct: 374 VSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVER 433
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-W 380
+ W+AMI+G A G +A+ LF M+ P+ VT +++ C G +E G+ +
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTF 493
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNG 439
F+ G+ V ++D+ + G + +A EL +P S W ++ C ++
Sbjct: 494 FNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHE 553
Query: 440 EFVEALDLFHQMMELD 455
V A Q++EL+
Sbjct: 554 NVVLAEQACSQLIELE 569
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 41/404 (10%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYA--KCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
LK +H+ + G+ D + I+A A L A+ VF I + +WN++I
Sbjct: 51 LKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP--NLYTWNTLIR 108
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFR-PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
SL + M++ PD T L+ + E L G+ H I
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
DV ++N+LI Y+KCG++ +F + R VSW +MI+ + Q G +EAL LF M
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
E P+ +T++ ++S C + E G+W +Y + +++ + NA++DMY+KCGS+
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSV 288
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEF----------------------------- 441
DA+ LF +PEK +VSWTTM+ G A GE+
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCG 348
Query: 442 --VEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFLE-KGWGYFNLMTKVYQVNPELN 497
EAL+LFH++ + +P+ VT ++ L AC G ++ GW + + + ++N L
Sbjct: 349 KPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLT 408
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + D+ + G L++AL S+ + D +W ++ +H
Sbjct: 409 --TSLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMH 449
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 14/305 (4%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARFLFDG 318
+SL+ C + L Q +H+ + G D + LI+ S +D A+ +FD
Sbjct: 38 TLSLIDQCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQ 94
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALEL 377
+ +W +I YA + ++L +F M + + PD T +I + L
Sbjct: 95 IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK F L +V + N+LI Y+KCG +G +F +P + VVSW +MI
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G EAL+LF +M +++PN +T + VL AC E G + + + ++ L
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIER-NRIGESLT 273
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY-VAYRLFE 556
+ M D+ + G +++A MP K D W T+L +IGEY A +F+
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMPEK-DIVSWTTMLVGYA-----KIGEYDAAQGIFD 327
Query: 557 LEPHS 561
P+
Sbjct: 328 AMPNQ 332
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 208/608 (34%), Positives = 321/608 (52%), Gaps = 21/608 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W I + + A++++ +M ++ P+ LTF I KAC D +H
Sbjct: 145 SVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLH 204
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
GH++KS + + Q ++ MY K ++ A +F + +D+ SW +MI GF Q+G+
Sbjct: 205 GHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEI 264
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS---------VHSFGIHIGVDA 188
+ L LF +M G+ + G +A SLLK FG+ V A
Sbjct: 265 EALYLFRDMFRQGVYQPNEFIFGSVFSACR----SLLKPEFGRQIQGMCAKFGLGRNVFA 320
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
S+C+ YAK L A+ F IE +VSWN+II D ++++ F+
Sbjct: 321 GCSLCDM----YAKFGFLPSAKRAFYQIES--PDLVSWNAIIAALANSD-VNEAIYFFCQ 373
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
MI+ G PD T ++LL +C P L QG +HS+ I G D +V N+L++MY+KC +
Sbjct: 374 MIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSN 433
Query: 309 IDSARFLFDGMCDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+ A +F + + VSW A++S +Q EA RLF M + PD +T+ +++
Sbjct: 434 LHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILG 493
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C + +LE+G ++ GL +V V N LIDMY+KCG + AR +F + +VS
Sbjct: 494 TCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVS 553
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W+++I G A G EAL+LF M L ++PN VT+L VL AC+H G +E+GW +N M
Sbjct: 554 WSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTME 613
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ P H SCM DLL R G L EA +F++ D +W TLL +CK H N++I
Sbjct: 614 IELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIA 673
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E A + +L+P ++A V ++NI+A G W VA LR +MK+ V+K PGQS + + +
Sbjct: 674 ERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQ 733
Query: 608 TCTFTVED 615
F ED
Sbjct: 734 IHVFFSED 741
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 212/455 (46%), Gaps = 13/455 (2%)
Query: 27 REAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFW 86
REA+D H +K + I+ T+ + AC + Y + IH HI+KS
Sbjct: 61 REALDTFNFH--------LKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQ 112
Query: 87 SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM 146
D+ +Q +++MY KC L A K FD M R V SW MI G++Q G + ++ M
Sbjct: 113 PDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQM 172
Query: 147 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
G D +T + +A A + L +H I G D + N IS Y K +
Sbjct: 173 LRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQI 232
Query: 207 KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLL 265
A VF I + ++SW S+I G T ++L +R M G ++P+ S+
Sbjct: 233 AHASDVFTMIST--KDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVF 290
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
S+C GR + +G +V +L MY+K G + SA+ F + V
Sbjct: 291 SACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLV 350
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SW A+I+ A D++EA+ F M G +PD +T L+++ CG L G +Y
Sbjct: 351 SWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYI 409
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEA 444
GL VCN+L+ MY+KC ++ DA +F + E +VSW +++ C+ + + EA
Sbjct: 410 IKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEA 469
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
LF M+ + +P+ +T +L C LE G
Sbjct: 470 FRLFKLMLFSENKPDNITITTILGTCAELVSLEVG 504
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 202/431 (46%), Gaps = 17/431 (3%)
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q + E + ++++ IQ + T + L A + + L K +H + D+
Sbjct: 57 QQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLV 116
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N ++ Y KC LK A F ++ LR+VVSW +I G + + +D++ Y M+
Sbjct: 117 LQNHILNMYGKCGSLKDARKAFDTMQ--LRSVVSWTIMISGYSQNGQENDAIIMYIQMLR 174
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G+ PD T S++ +C + G +H H I G+D + N LISMY+K G I
Sbjct: 175 SGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAH 234
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCG 370
A +F + + +SW +MI+G+ Q G EAL LF M G P+ S+ S C
Sbjct: 235 ASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACR 294
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
E G+ GL NV +L DMY+K G + A+ FY + +VSW
Sbjct: 295 SLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNA 354
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+IA A N + EA+ F QM+ + L P+ +TFL +L AC L +G + Y
Sbjct: 355 IIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQG-----MQIHSY 408
Query: 491 QVNPELNHYSCMADLL----GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
+ L+ + + + L + L +A + + + + W +L AC H+ +
Sbjct: 409 IIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHK--QP 466
Query: 547 GEYVAYRLFEL 557
GE A+RLF+L
Sbjct: 467 GE--AFRLFKL 475
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 35/256 (13%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I + + WN+ + + +A LF+ M ++ +P+N+T I CA+L
Sbjct: 444 ISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEV 503
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+H VKS D+ V ++DMYAKC L A +FD + D+ SW+++IVG+AQ
Sbjct: 504 GNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQ 563
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G ++ L LF MR +G+Q + VT +G+ A H+ L++ G H+ ++ +
Sbjct: 564 FGLGQEALNLFRMMRNLGVQPNEVTYLGVLSA---CSHIGLVEE----GWHLYNTMEIEL 616
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ C M +L+ R GC Y ++ NF +
Sbjct: 617 GIPPTREHVSC----MVDLLAR----------------AGCLY-----EAENFIKKT--- 648
Query: 253 GFRPDVTTVVSLLSSC 268
GF PD+T +LL+SC
Sbjct: 649 GFDPDITMWKTLLASC 664
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 323/593 (54%), Gaps = 12/593 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKN----DIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
W + I V + + L RM ++ PN+ T +AC L + +H
Sbjct: 179 WTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLH 238
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G VK+ V +++ MY KCD + A LF ++P++D+ SW ++I + + G E
Sbjct: 239 GFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAE 298
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
K + LF M G+Q D V + L + + K+ H+ + V + N I
Sbjct: 299 KAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALI 358
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNS-IIGGCTYGDKFDDSLNFYRHMIY---DG 253
S YAKC + +A VFR + + R SW+S ++ C G L YR M + D
Sbjct: 359 SMYAKCKQVDIAATVFRMLHQ--RDTDSWSSMVVAYCKAGLDLK-CLELYREMQFRDKDE 415
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F D +++S++SSC L G+ H + I + + SV N LISMY +CG+ D AR
Sbjct: 416 FEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVAR 475
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F + + V+W+A+IS Y+ G +AL L+ M G P+ T++S+IS C
Sbjct: 476 KIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLA 535
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALE G+ ++ GL+ ++ +C AL+DMY KCG +G AR++F ++ E+ VV+W MI+
Sbjct: 536 ALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMIS 595
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G ++GE ++AL LF M +++PN +TFLA+L AC HAG ++KG F M + Y +
Sbjct: 596 GYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE-YSLE 654
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+CM DLLG+ G L+EA D V +MPI+ D GIWGTLL ACK+H N E+G VA +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKK 714
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
F +P + Y+ M+N Y +W+ + LR MMK + V+K G S + I G
Sbjct: 715 AFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 265/549 (48%), Gaps = 24/549 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS +R ++ L RRM+ + P+ T P +A A A+L +H + V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 82 KSPFWS---DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + V +++V MYA+C + A +LFD+MP+RDV +W A+I G G +
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 139 VLCLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L Y +R+V G + + T+ +A LS+ +H FG+ GV SV
Sbjct: 195 GLS--YLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSV 252
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
++ S Y KC+ + A ++F + E + +VSW S+IG + ++ + M
Sbjct: 253 VSSLFSMYTKCDSTEDARILFPELPE--KDLVSWTSLIGAYCRAGHAEKAVELFLGMEES 310
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G +PD + LL+ + G+ H+ + F V + N LISMY+KC +D A
Sbjct: 311 GLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIA 370
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP---DLVTVLSMISGC 369
+F + R SW++M+ Y + G + L L+ M+ + D +++S+IS C
Sbjct: 371 ATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSC 430
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ G L LG+ Y+ +N V NALI MY +CG+ AR++F + K VV+W+
Sbjct: 431 SRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWS 490
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I+ + G +AL L+ QM+ ++PN T ++V+ +C + LE G + K
Sbjct: 491 ALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG-ELIHSHVKD 549
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ +L+ + + D+ + G+L A SM ++ D W ++ +H GE
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH-----GEA 603
Query: 550 V-AYRLFEL 557
+ A +LF +
Sbjct: 604 IQALKLFSM 612
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ ++ + W++ I + ALLL+ +M ++PN+ T + +CA L+ +
Sbjct: 480 MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEH 539
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++IH H+ D+ + T +VDMY KC +L A K+FD M +RDV +WN MI G+
Sbjct: 540 GELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGM 599
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G + L LF M ++ + +T + + A HA + + + + ++ ++
Sbjct: 600 HGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKH 659
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+ K L+ AE V + + W +++G C D F+ L +
Sbjct: 660 YACMVDLLGKSGHLQEAEDVVSAMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAK 713
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 307/580 (52%), Gaps = 39/580 (6%)
Query: 71 LYSQMIHGHIVKSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+++QM+ + + P+ S++F A LD A K+FD++P ++ SWN +I
Sbjct: 158 IHAQMLRTNKLHDPYAASELFTAAAFSSFSA----LDYARKVFDQIPQPNLYSWNILIRA 213
Query: 130 FAQMG-FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
A ++ VL + + T L +A + + K+VH I
Sbjct: 214 LATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGD 273
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV V N+ I YA C L +A LVF IE + +VSWNS++ G G D +L+ +
Sbjct: 274 DVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFER 333
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +G P+ T+VS++S+C L GR V + ++++V N I M+ KCG+
Sbjct: 334 MRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGE 393
Query: 309 IDSARFLFDGMCDRTRVSWTA-------------------------------MISGYAQK 337
++ AR LFD M R VSWT +ISGY Q
Sbjct: 394 VEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453
Query: 338 GDLDEALRLFFAME--AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
G EAL +F ++ +G PD VT+LS +S C Q GA+++G+W Y ++ N
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +LIDMYSK G + A E+F+++ K V W+ MIAG A++G A++LF M E
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++PN VTF +L AC+H+G +++G F+ M +VY V P+ HYSCM D+LGR G L+EA
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEA 633
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
L F++ MP+ A +WG LL AC IH N+E+ E RL E+EP + YV ++N+YA
Sbjct: 634 LKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKT 693
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
G W+GV+ LR M+ + +KK G S + I+G F V D
Sbjct: 694 GDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGD 733
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 233/472 (49%), Gaps = 40/472 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN IR ++ +++L+F RM + PN TFP + KA A+ FL + +HG
Sbjct: 207 WNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMA 266
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP--DRDVASWNAMIVGFAQMGFLEK 138
+K+ F D+FV +++ YA C LD AY +F+ + ++D+ SWN+M+ GF Q G+ +K
Sbjct: 267 IKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDK 326
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF MR G+ + VT++ + A +L+L + V + + +++VCN I
Sbjct: 327 ALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATID 386
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG----CTYG---DKFD----------- 240
+ KC ++++A +F +E+ R VVSW +II G +G D FD
Sbjct: 387 MFVKCGEVEIARGLFDNMEK--RDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWN 444
Query: 241 -------------DSLNFYR--HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
++L +R + G RPD T++S LS+C A+ G +H +
Sbjct: 445 VLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIK 504
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
L+ ++ +LI MYSK GD++ A +F + ++ W+AMI+G A G + A+
Sbjct: 505 KERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIE 564
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMY 404
LF M+ P+ VT +++ C SG ++ GK FD G+ + ++D+
Sbjct: 565 LFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVL 624
Query: 405 SKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G + +A + +P S W ++ C ++G A +++E++
Sbjct: 625 GRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIE 676
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 173/440 (39%), Gaps = 87/440 (19%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS + V KAL LF RM+ + PN +T + ACAK + + +
Sbjct: 308 IVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCD 367
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS---------------- 122
+I ++ ++ V +DM+ KC ++ A LFD M RDV S
Sbjct: 368 YIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGI 427
Query: 123 ---------------WNAMIVGFAQMGFLEKVLCLFYNMRLV--GIQADFVTVMGLTQAA 165
WN +I G+ Q G ++ L +F ++L G + D VT++ A
Sbjct: 428 ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487
Query: 166 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
+ + + +H + + + ++ + I Y+K D++ A VF I G + V
Sbjct: 488 AQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSI--GNKDVFV 545
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
W+++I G + + ++ + M +P+ T +LL +C
Sbjct: 546 WSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCAC----------------- 588
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFD------GMCDRTRVSWTAMISGYAQKGD 339
S G +D + LFD G+ +T+ ++ M+ + G
Sbjct: 589 ------------------SHSGLVDEGKRLFDEMERVYGVVPKTK-HYSCMVDVLGRAGH 629
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK---DNVMV 396
L+EAL+ M A P +++ C G LEL + ACS L+ N
Sbjct: 630 LEEALKFIEGMPLA---PSASVWGALLGACCIHGNLELAE----KACSRLLEIEPGNHGA 682
Query: 397 CNALIDMYSKCGSIGDAREL 416
L ++Y+K G EL
Sbjct: 683 YVLLSNLYAKTGDWEGVSEL 702
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 205/554 (37%), Positives = 305/554 (55%), Gaps = 10/554 (1%)
Query: 70 FLYSQMIHGHIVKSPF----WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
LYS+ H ++ F + ++F T+++ YAK + A ++FD++P D+ S+N
Sbjct: 52 LLYSKCGSLHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNT 111
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
+I +A G L LF +R + + D T+ G+ A + L++ +H F + G
Sbjct: 112 LIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITAC--GDDVGLVRQLHCFVVVCG 169
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLN 244
D SV N ++ Y++ L A VFR + EG R VSWN++I C + +++
Sbjct: 170 HDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVG 229
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+R M+ G + D+ T+ S+L++ C + LV GR H I GF + V + LI +YS
Sbjct: 230 LFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYS 289
Query: 305 KC-GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE-ALRLFFAMEAAGEVPDLVTV 362
KC G + R +F+ + V W MISG++ DL E L F M+ G PD +
Sbjct: 290 KCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSF 349
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALP 421
+ + S C + LGK A + N V V NAL+ MYSKCG++ DAR +F +P
Sbjct: 350 VCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP 409
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
E VS +MIAG A +G VE+L LF M+E D+ PN +TF+AVL AC H G +E+G
Sbjct: 410 EHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQK 469
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YFN+M + + + PE HYSCM DLLGR GKLKEA +++MP + W TLL AC+ H
Sbjct: 470 YFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKH 529
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
N+E+ A LEP++AAPYV ++N+YA RW+ A ++ +M+ VKK PG S
Sbjct: 530 GNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSW 589
Query: 602 VHINGKTCTFTVED 615
+ I+ K F ED
Sbjct: 590 IEIDKKVHVFVAED 603
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 12/345 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I E +A+ LFR M + ++ + T + A + D + + HG ++
Sbjct: 211 WNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMI 270
Query: 82 KSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL-EK 138
KS F + V + ++D+Y+KC ++C K+F+++ D+ WN MI GF+ L E
Sbjct: 271 KSGFHGNSHVGSGLIDLYSKCAGSMVECR-KVFEEITAPDLVLWNTMISGFSLYEDLSED 329
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 197
L F M+ G + D + + +T A + SL K VH+ I V + VSV N +
Sbjct: 330 GLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALV 389
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y+KC ++ A VF + E VS NS+I G +SL + M+ P+
Sbjct: 390 AMYSKCGNVHDARRVFDTMPE--HNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPN 447
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T +++LS+CV + +G + + + + + + +I + + G + A +
Sbjct: 448 SITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 317 DGMC-DRTRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGEVP 357
+ M + + W ++ + G+++ A++ F +E P
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAP 552
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 36/266 (13%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHS---------------------------HGIHYGF 289
+ T +LL +C+ L+ G+++H+ H F
Sbjct: 8 QLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF 67
Query: 290 DL----DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
L +V NTLI+ Y+K I AR +FD + VS+ +I+ YA +G+ LR
Sbjct: 68 HLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLR 127
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LF + D T+ +I+ CG + L + + G V NA++ YS
Sbjct: 128 LFEEVRELRLGLDGFTLSGVITACGDD--VGLVRQLHCFVVVCGHDCYASVNNAVLACYS 185
Query: 406 KCGSIGDARELFYALPE---KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
+ G + +AR +F + E + VSW MI C + E +EA+ LF +M+ L+ + T
Sbjct: 186 RKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFT 245
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTK 488
+VL A T L G + +M K
Sbjct: 246 MASVLTAFTCVKDLVGGRQFHGMMIK 271
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 207/607 (34%), Positives = 320/607 (52%), Gaps = 50/607 (8%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
PN+ F + +C + ++++H I+ + F +IF+Q ++D+Y KCD LD A KL
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 112 FDKMPDR-------------------------------DVASWNAMIVGFAQMGFLEKVL 140
FD+MP R D SWN+M+ GFAQ E+ L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M + + A L++ VH+ DV + + I Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC + AE VF G+ E R +V+WNS+I ++L + M+ G PD T
Sbjct: 193 SKCGSVACAEEVFSGMIE--RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ S++S+C AL +G +H+ + F D+ + N L+ MY+KC ++ AR +FD M
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG----AL 375
R VS T+M+SGYA+ + A +F M ++V+ ++I+G Q+G AL
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQR----NVVSWNALIAGYTQNGENEEAL 366
Query: 376 ELGK-------WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
L + W +Y LK ++ V N+LIDMY KCGSI D +F + E+ VSW
Sbjct: 367 RLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSW 426
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+I G A NG EAL +F +M+ +P+ VT + VL AC+HAG +E+G YF M +
Sbjct: 427 NAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE 486
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ + P +HY+CM DLLGR G L EA + +++MP+ DA +WG+LL ACK+H NIE+G+
Sbjct: 487 -HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGK 545
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
+ A +L E++P ++ PYV ++N+YA GRW V +R +M++ V K PG S + + +
Sbjct: 546 HAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRV 605
Query: 609 CTFTVED 615
F V+D
Sbjct: 606 HVFLVKD 612
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 212/446 (47%), Gaps = 17/446 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + ++L F +M + D N +F ACA L D +H +
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + +D+++ + ++DMY+KC + CA ++F M +R++ +WN++I + Q G + L
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAY 200
+F M G++ D VT+ + A L +H+ + D+ + N + Y
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC+ + A VF + +R VVS S++ G + + M
Sbjct: 295 AKCSKVNEARRVFDRM--SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNAL 352
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGI---HYGF----DLDVSVINTLISMYSKCGDIDSAR 313
+ + EAL RL+ I HY F D+ V N+LI MY KCG I+
Sbjct: 353 IAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGS 412
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F+ M +R VSW A+I GYAQ G EAL++F M GE PD VT++ ++ C +G
Sbjct: 413 RVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAG 472
Query: 374 ALELGK-WFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWT 429
+E G+ +F + G LKD+ ++D+ + G + +A+ L A+P V W
Sbjct: 473 LVEEGRHYFFSMEEHGLIPLKDHY---TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWG 529
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD 455
+++A C ++G +++E+D
Sbjct: 530 SLLAACKVHGNIEMGKHAAEKLLEID 555
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 39/313 (12%)
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
++ D + P+ + LL SC+ + RLVH+ + F +++ + N LI +Y KC
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+D AR LFD M R +W ++IS + G LDEA RLF +M PD + SM+SG
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE----PDQCSWNSMVSG 121
Query: 369 CGQSGALELG-KWF----------DNY-------ACSGGLKDN----------------- 393
Q E ++F + Y AC+G + N
Sbjct: 122 FAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTD 181
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V + +ALIDMYSKCGS+ A E+F + E+ +V+W ++I NG EAL++F +MM+
Sbjct: 182 VYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD 241
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
L P+ VT +V+ AC L++G + K + +L + + D+ + K+
Sbjct: 242 SGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVN 301
Query: 514 EALDFVQSMPIKS 526
EA M I++
Sbjct: 302 EARRVFDRMSIRN 314
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 315/586 (53%), Gaps = 50/586 (8%)
Query: 72 YSQM--IHGHIVKSPFWSDIFVQTTMVDMYA--KCDRLDCAYKLFDKMPDRDVASWNAMI 127
+SQ+ I ++ + D F + ++ A + LD K+ + + + +V SWNA+I
Sbjct: 66 FSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVI 125
Query: 128 VGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI---- 182
G + +K L L+ M G + D T L + +L+ S F I
Sbjct: 126 RGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCA-----NLVLSYMGFEILGQV 180
Query: 183 -HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG-LRTVVSWNSIIGGCTYGDKFD 240
+G D D+ + N I + +A VF +EG +R +VSWNS+I G +
Sbjct: 181 LKMGFDKDMYLYNGIIHMLVSVGESGLAHKVF---DEGCVRDLVSWNSLINGYVRRRQPR 237
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+++ Y+ MI + +PD T++ ++S+C E+L GR +H + G +L +S++N L+
Sbjct: 238 EAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALM 297
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD------------------- 341
MY KCGD+++ + LFD M +T VSWT MI GYA+ G LD
Sbjct: 298 DMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNA 357
Query: 342 ------------EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
EAL LF M+ + PD VT+L +S C Q GAL+ G W NY
Sbjct: 358 MIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHN 417
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L +V + ALIDMY+KCG++ A ++F +P + ++WT +I G AL G +A+ F
Sbjct: 418 LSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFS 477
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M++ L P+ +TFL VL AC H G +E+G YF+ M + ++P+ HYSCM +LLGR
Sbjct: 478 KMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRA 537
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L+EA + +++MP+++DA +WG L AC IHRN+ IGE A +L +L+PH + YV +A
Sbjct: 538 GLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLA 597
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
N+Y G+W+ N+R MM V+K PG S + +NG F V D
Sbjct: 598 NMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRD 643
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 188/410 (45%), Gaps = 38/410 (9%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWIS--AYAKCNDLKMAELVFRGIEEGLRTVVSW 226
K S LK + + I G+ D + IS A ++ +L + ++ V SW
Sbjct: 64 KSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNP--NVFSW 121
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
N++I GC + L Y+ M+ G RPD T L C G + +
Sbjct: 122 NAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVL 181
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
GFD D+ + N +I M G+ A +FD C R VSW ++I+GY ++ EA+
Sbjct: 182 KMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMG 241
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
++ M PD VT++ ++S C Q +L+LG+ Y GL + + NAL+DMY
Sbjct: 242 IYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYV 301
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF------------------------ 441
KCG + + LF + +KTVVSWTTMI G A NG
Sbjct: 302 KCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGS 361
Query: 442 -------VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
EAL+LF +M +++P++VT L L AC+ G L+ G N + K + ++
Sbjct: 362 CVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKK-HNLSL 420
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
++ + + D+ + G + +AL MP + ++ W ++ ++ N+
Sbjct: 421 DVALGTALIDMYAKCGNMTKALQVFNEMP-RRNSLTWTAIIGGLALYGNV 469
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 35/289 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I V + + +A+ ++++M ++P+ +T + ACA+L + IH +I
Sbjct: 223 WNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIE 282
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE---- 137
+S I + ++DMY KC L+ LFD M + V SW MIVG+A+ G L+
Sbjct: 283 ESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGK 342
Query: 138 ---------------------------KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+ L LF M+ ++ D VT++ A
Sbjct: 343 LFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGA 402
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L H++ + DV++ I YAKC ++ A VF E R ++W +II
Sbjct: 403 LDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFN--EMPRRNSLTWTAII 460
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV-QGR 278
GG +D++ ++ MI G PD T + +L++C C LV +GR
Sbjct: 461 GGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTAC-CHGGLVEEGR 508
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARFLFDG 318
++SLL +C ++ Q + + + I G LD + LIS S+ ++D + +
Sbjct: 56 LLSLLENC---KSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNN 112
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + SW A+I G + + + L L+ M AG PD T + C +
Sbjct: 113 LQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYM 172
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G G ++ + N +I M G G A ++F + +VSW ++I G
Sbjct: 173 GFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVR 232
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ EA+ ++ QM+ ++P+ VT + V+ AC L+ G
Sbjct: 233 RRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLG 274
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 314/595 (52%), Gaps = 51/595 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V ++ L LF+ M+K + + TF + ++CA LS +HGH +
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHAL 302
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F +D+ + T +DMY KC+ L A KLF+ +P+ ++ S+NA+IVG+A+
Sbjct: 303 KTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD------- 355
Query: 142 LFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
G+ D V++ G +A A+ L L+ VH + +++ V N + Y
Sbjct: 356 -------KGLGLDEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVANAILDMY 407
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC L A LVF E R VSWN+II + +L+ + H
Sbjct: 408 GKCGALVEACLVFE--EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIH------------ 453
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++ RL G D V + LI MYSKCG ++ A L D +
Sbjct: 454 -----------NRIIKSRL--------GLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLA 492
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++T VSW A+ISG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 493 EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQ 552
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
L+ + + + L+DMYSKCG++ D + +F P + V+W M+ G A +G
Sbjct: 553 IHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGL 612
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL +F M +++PN TFLAVL+AC H G +EKG YF+ M Y ++P+L HYS
Sbjct: 613 GEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYS 672
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ D++GR G++ +AL+ ++ MP ++DA IW TLL CKIH N+E+ E AY + +LEP
Sbjct: 673 CVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPE 732
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++NIYA G W+ V LR MM+ N +KK PG S + I + F V D
Sbjct: 733 DSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGD 787
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 155/603 (25%), Positives = 250/603 (41%), Gaps = 109/603 (18%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TF I + C+ + H ++ + F +FV ++ MY KC L+ A+K+FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 116 PDRDVASWNAMIVGFAQMGFL-------------------------------EKVLCLFY 144
P RD SWNAM+ G+A G + KV+ +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 145 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLK------SVHSFGIHIGVDADVSVCNTWIS 198
M +G TV T A+ K S L+ +H + +G D DV + +
Sbjct: 164 QMGRMG------TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 217
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC L + F + E + VSW++II GC D L ++ M G
Sbjct: 218 MYAKCKKLDCSIQFFHSMPE--KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQ 275
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+T S+ SC AL G +H H + F DV + + MY KC ++ A+ LF+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 319 MCDRTRVSWTAMISGYAQ----------------------KGDLDEALRLFFAMEAAGEV 356
+ + S+ A+I GYA+ KGDL+ +M++ +
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQS 395
Query: 357 PDLV--TVLSMISGCG----------------------------QSGALE--LGKWFDNY 384
V +L M CG Q+G E L + N
Sbjct: 396 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNR 455
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
L + V ALIDMYSKCG + A +L L E+TVVSW +I+G +L + EA
Sbjct: 456 IIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 515
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMA 503
F +M+E+ + P+ T+ +L C + +E G + ++ K Q + ++ S +
Sbjct: 516 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--STLV 573
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH----RNIEIGEYVAYRLFELEP 559
D+ + G +++ + P + D W ++C H ++I EY+ +L ++P
Sbjct: 574 DMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQHGLGEEALKIFEYM--QLENVKP 630
Query: 560 HSA 562
+ A
Sbjct: 631 NHA 633
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 2/226 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+L+ T+ WN+ I + ++ +A F +M + ++P+N T+ I CA L
Sbjct: 486 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 545
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IH I+K SD ++ +T+VDMY+KC + +F+K P+RD +WNAM+
Sbjct: 546 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 605
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVD 187
G+AQ G E+ L +F M+L ++ + T + + +A H + L HS + G+D
Sbjct: 606 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 665
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ + + + + A + G+ V+ W +++ C
Sbjct: 666 PQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVI-WRTLLSIC 710
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 308/584 (52%), Gaps = 6/584 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W +R NE+ + + + + K+ +++ F KAC ++ D + IH IV
Sbjct: 122 WKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIV 181
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K P + ++ V T ++DMYAKC + +YK+F+ + R+V W +MI G+ + E+ L
Sbjct: 182 KVPSFDNV-VLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLV 240
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF MR + + T L A + L K H I G++ + + + Y
Sbjct: 241 LFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYV 300
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+ A VF E +V W ++I G T+ +++L+ ++ M G +P+ T+
Sbjct: 301 KCGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTI 358
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS C L GR +H I G D +V N L+ MY+KC A+++F+ +
Sbjct: 359 ASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESE 417
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W ++ISG++Q G + EAL LF M +P+ VTV S+ S C G+L +G
Sbjct: 418 KDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSL 477
Query: 382 DNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
Y+ G +V V AL+D Y+KCG AR +F + EK ++W+ MI G G
Sbjct: 478 HAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQG 537
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ +L+LF +M++ +PN TF +VL AC+H G + +G YF+ M K Y P HY
Sbjct: 538 DTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHY 597
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM D+L R G+L++ALD ++ MPI+ D +G L C +H ++GE V ++ +L P
Sbjct: 598 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHP 657
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
A+ YV ++N+YA GRW +R +MK+ + K G S++
Sbjct: 658 DDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIME 701
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 197/403 (48%), Gaps = 4/403 (0%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG + + DI + T +V +Y A +FD++P+ D W ++ +
Sbjct: 76 HGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNES 135
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+V+ + + G D + +A + L K +H + + D V
Sbjct: 136 FEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNVVLTGL 194
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC ++K + VF I LR VV W S+I G D +++ L + M +
Sbjct: 195 LDMYAKCGEIKSSYKVFEDIT--LRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLG 252
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T +L+ +C AL QG+ H I G +L ++ +L+ MY KCGDI +AR +F
Sbjct: 253 NEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVF 312
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ V WTAMI GY G ++EAL LF M G P+ VT+ S++SGCG G LE
Sbjct: 313 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLE 372
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG+ + G+ D V NAL+ MY+KC DA+ +F EK +V+W ++I+G +
Sbjct: 373 LGRSIHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 431
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG EAL LFH+M + PN VT ++ AC G L G
Sbjct: 432 QNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIG 474
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 147/316 (46%), Gaps = 3/316 (0%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
L+ H G+ D+S+ +S Y K A LVF I E W I+
Sbjct: 72 LRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPE--PDFYLWKVILRCY 129
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
++ + + FY ++ GF D L +C + L G+ +H + D
Sbjct: 130 CLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDN 188
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V+ L+ MY+KCG+I S+ +F+ + R V WT+MI+GY + +E L LF M
Sbjct: 189 VVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMREN 248
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
+ + T +++ C + AL GKWF G++ + + +L+DMY KCG I +A
Sbjct: 249 SVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNA 308
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
R +F +V WT MI G NG EAL LF +M + ++PN VT +VL C
Sbjct: 309 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLV 368
Query: 474 GFLEKGWGYFNLMTKV 489
G LE G L KV
Sbjct: 369 GNLELGRSIHGLSIKV 384
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 41/322 (12%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARFLFDGMCD 321
LLS C ++L Q +HG+ G L D+S+ L+S+Y G AR +FD + +
Sbjct: 62 LLSKCTNIDSLRQ-----AHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPE 116
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
W ++ Y + E ++ + + G D + + C + L+ GK
Sbjct: 117 PDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKI 176
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
DNV V L+DMY+KCG I + ++F + + VV WT+MIAG N +
Sbjct: 177 HCQIVKVPSFDNV-VLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLY 235
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------------- 488
E L LF++M E + N T+ ++ ACT L +G + + K
Sbjct: 236 EEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSL 295
Query: 489 ------------VYQVNPELNH-----YSCMADLLGRKGKLKEALDFVQSMP---IKSDA 528
+V E +H ++ M G + EAL Q M IK +
Sbjct: 296 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNC 355
Query: 529 GIWGTLLCACKIHRNIEIGEYV 550
++L C + N+E+G +
Sbjct: 356 VTIASVLSGCGLVGNLELGRSI 377
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 205/601 (34%), Positives = 313/601 (52%), Gaps = 7/601 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L ++ + ++ NS +R +AL ++ M+ D +LTFPF AKACA L
Sbjct: 68 LAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD----HLTFPFAAKACAGLRL 123
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H + + F D +VQ ++ MY C + A +F M +R V SWNA+I G
Sbjct: 124 GRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAG 183
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G+ E+ L +F M G+ D TV+ + A AK L+ ++VH G+
Sbjct: 184 CVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDY 243
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V+V N I Y KC L+ A VF + + VVSW ++IG D+ ++++ M
Sbjct: 244 VAVKNALIDMYGKCRSLEDARRVFDHCKHD-KDVVSWTAMIGAYVLNDRAFEAISLGCQM 302
Query: 250 IYDGFR-PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+ G P+ T+V LLS+C + + H+ I G D++V LI Y++CG
Sbjct: 303 LMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGK 362
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ R + R +W A +SGY G +A+ LF M A PD T+ S++
Sbjct: 363 MKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPA 421
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
+S L+ GK + + G + + LID+YSK G + A LF LPEK VV+W
Sbjct: 422 YAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAW 481
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
TT+IAG +++G A+ L+ +M+E +PN VT +L AC+HAG +++G F M
Sbjct: 482 TTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRN 541
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
V+ + P HYSC+ D+LGR G+++EA +Q MP + +WG LL AC +H+N+E GE
Sbjct: 542 VHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGE 601
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A RLF+L+P + YV + NIYA RW V ++R MM + K PG SLV
Sbjct: 602 VAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARSVQ 661
Query: 609 C 609
C
Sbjct: 662 C 662
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 327/595 (54%), Gaps = 5/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I V + + +AL LFRRM++ + N TF + S IHG +
Sbjct: 216 WNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAAL 275
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS ++D++V ++ MYAKC R++ A ++F M RD SWN ++ G Q L
Sbjct: 276 KSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALN 335
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F +M+ + D V+V+ L A+ + +L K VH++ I G+D+++ + NT I YA
Sbjct: 336 YFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYA 395
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +K F + E + ++SW +II G + +++N +R + G D +
Sbjct: 396 KCCCVKHMGYAFECMHE--KDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMI 453
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+L +C ++ + + HG + DL D+ + N ++++Y + G D AR F+ +
Sbjct: 454 GSVLRACSGLKS--RNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIR 511
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ VSWT+MI+ G EAL LF++++ PD + ++S +S +L+ GK
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G + ++L+DMY+ CG++ ++R++F+++ ++ ++ WT+MI ++G
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA+ LF +M + ++ P+ +TFLA+L AC+H+G + +G +F +M YQ+ P HY+
Sbjct: 632 GNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYA 691
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLL R L+EA FV+SMPIK + +W LL AC IH N E+GE A L + +
Sbjct: 692 CMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTK 751
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y ++NI+A GRW+ V +R MK N +KK PG S + ++ K TF D
Sbjct: 752 NSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARD 806
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 238/464 (51%), Gaps = 5/464 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI WN+ + V + +A+ L++ M+ + + TFP + KAC L + IH
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAMIVGFAQMGF 135
G VK F +FV ++ MY KC L A LFD M D SWN++I G
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGK 228
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M+ VG+ ++ T + Q + L +H + ADV V N
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANA 288
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ YAKC ++ AE VF + R VSWN+++ G + + D+LN++R M +
Sbjct: 289 LIAMYAKCGRMEDAERVFASML--CRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQK 346
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD +V++L+++ L+ G+ VH++ I G D ++ + NTLI MY+KC + +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYA 406
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M ++ +SWT +I+GYAQ EA+ LF ++ G D + + S++ C +
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ Y L D +M+ NA++++Y + G AR F ++ K +VSWT+MI C
Sbjct: 467 NFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCC 525
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG VEAL+LF+ + + +++P+ + ++ L A + L+KG
Sbjct: 526 VHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 257/540 (47%), Gaps = 27/540 (5%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C + Q +H ++KS F+ T ++ MY KC L A K+FD+M +R + +W
Sbjct: 56 CVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTW 113
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NAM+ F G + + L+ MR++G+ D T + +A L +H +
Sbjct: 114 NAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G V VCN I+ Y KC DL A ++F GI VSWNSII K ++L
Sbjct: 174 CGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEAL 233
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ +R M G + T V+ L P + G +H + DV V N LI+MY
Sbjct: 234 SLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMY 293
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
+KCG ++ A +F M R VSW ++SG Q +AL F M+ + + PD V+VL
Sbjct: 294 AKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVL 353
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
++I+ G+SG L GK YA GL N+ + N LIDMY+KC + F + EK
Sbjct: 354 NLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEK 413
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFH--QMMELDLRPNRVTFLAVLQACT---HAGFLEK 478
++SWTT+IAG A N +EA++LF Q+ +D+ P + +VL+AC+ F+ +
Sbjct: 414 DLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIG--SVLRACSGLKSRNFIRE 471
Query: 479 GWGYF--NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
GY + + N +N Y +G + + A + ++S I S W +++
Sbjct: 472 IHGYVFKRDLADIMLQNAIVNVYG----EVGHRDYARRAFESIRSKDIVS----WTSMIT 523
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
C +H + + A LF + +A I AL ANL ++ K ++ F
Sbjct: 524 CC-VHNGLPVE---ALELFYSLKQTNIQPDSIAIISAL----SATANLSSLKKGKEIHGF 575
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 134/280 (47%), Gaps = 18/280 (6%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
LL CV +AL QG+ +H+ + L + L+ MY KCG + A +FD M +RT
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+W AM+ + G EA+ L+ M G D T S++ CG G LG
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKTVVSWTTMIAGCALNGEF 441
A G + V VCNALI MY KCG +G AR LF + ++ VSW ++I+ G+
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF------NLMTKVYQVNPE 495
+EAL LF +M E+ + N TF+A LQ F++ G G N VY N
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ Y+ + G++++A SM + D W TLL
Sbjct: 290 IAMYA-------KCGRMEDAERVFASMLCR-DYVSWNTLL 321
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS I W S I V +AL LF +K+ +I+P+++ A A LS +
Sbjct: 511 RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGK 570
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG +++ F+ + + +++VDMYA C ++ + K+F + RD+ W +MI G
Sbjct: 571 EIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHG 630
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + LF M + D +T + L A H+
Sbjct: 631 CGNEAIALFKKMTDENVIPDHITFLALLYACSHS 664
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 197/526 (37%), Positives = 290/526 (55%), Gaps = 20/526 (3%)
Query: 107 CAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAA 165
C LF+ + + SWN I GF + + L+ ++ G + D T L +A
Sbjct: 31 CTNILFNTR-NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKAC 89
Query: 166 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
+ + + +H+G D+D+ V N I C DL A +F + +R +VS
Sbjct: 90 ARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFD--KSCVRDLVS 147
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
WNS+I G ++LNFYR M +G +PD T++ ++SSC E L GR H +
Sbjct: 148 WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIE 207
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT----------------A 329
G L V + N L+ MY KCG+++SAR LFD M ++T VSWT A
Sbjct: 208 ENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNA 267
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
MI GY EAL LF M+A PD VT++S +S C Q GAL++G W +Y
Sbjct: 268 MIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHE 327
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L NV + ALIDMY+KCG I A ++F LP + ++WT +I+G AL+G A+ F
Sbjct: 328 LSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFS 387
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M++ + P+ VTFL +L AC H G +E+G YF+ M+ + ++P+L HYSCM DLLGR
Sbjct: 388 EMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRA 447
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L+EA + ++SMPI++DA +WG L AC+IH N+ +GE A +L +++PH + YV +A
Sbjct: 448 GLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLA 507
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
N+Y W R +M++ V+K PG S + +NG F V D
Sbjct: 508 NMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRD 553
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 231/458 (50%), Gaps = 17/458 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYS 73
R+ WN IR +D +A++L++R+ + D +P+N T+P + KACA+LS
Sbjct: 39 RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 98
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
I GH++ F SDIFV ++ + C LD A K+FDK RD+ SWN+MI G+ +
Sbjct: 99 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 158
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G+ + L + M++ GI+ D VT++G+ + + L L + H + G+ V +
Sbjct: 159 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 218
Query: 194 NTWISAYAKCNDLKMAELVFRGI--------------EEGLRTVVSWNSIIGGCTYGDKF 239
N + Y KC +L+ A +F + E + VV WN++IGG + ++
Sbjct: 219 NALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRG 278
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
++L + M PD T+VS LS+C AL G +H + + L+V++ L
Sbjct: 279 KEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTAL 338
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
I MY+KCG I A +F + R ++WTA+ISG A G+ A+ F M +PD
Sbjct: 339 IDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDE 398
Query: 360 VTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT L ++S C G +E G K+F + L + + ++D+ + G + +A EL
Sbjct: 399 VTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIK 458
Query: 419 ALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
++P E V W + C ++G + +++++D
Sbjct: 459 SMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMD 496
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 206/600 (34%), Positives = 328/600 (54%), Gaps = 12/600 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ--MIHGH 79
WN + L F + + +PN + + +A +L +YSQ HG+
Sbjct: 116 WNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELK--IYSQGFAFHGY 173
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFLEK 138
I +S F + + VQ +++ +YA+ + AYKLF +M R DV SW+ MI GF Q+G E+
Sbjct: 174 IFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQ 232
Query: 139 VLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+F NM GI D VTV+ + +A + K +SL VH I G++ D+ V N+ I
Sbjct: 233 GFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLI 292
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC ++ A F+ I E + ++SWN ++ + ++L M+ +G D
Sbjct: 293 DMYSKCFNVHSAFKAFKEIPE--KNIISWNLMLSAYILNESHLEALALLGTMVREGAEKD 350
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ ++L ++ R VH I G++ + ++N++I Y+KC ++ AR +FD
Sbjct: 351 EVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFD 410
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
GM + V+W+ MI+G+A+ G DEA+ +F M +P+ V++++++ C S L
Sbjct: 411 GMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQ 469
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
KW A GL V + ++IDMYSKCG I + F +P+K VV W+ MI+ +
Sbjct: 470 SKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRI 529
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG EAL LF ++ + +PN VT L++L AC+H G +E+G +F M + + + P L
Sbjct: 530 NGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLE 589
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAG--IWGTLLCACKIHRNIEIGEYVAYRLF 555
HYSC+ D+L R GK EAL+ ++ +P + +AG IWGTLL +C+ + NI +G A R+
Sbjct: 590 HYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVL 649
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+LEP S+A Y+ +N+YA G A +R + K VK G SLVHIN +T F D
Sbjct: 650 QLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAGD 709
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 261/531 (49%), Gaps = 30/531 (5%)
Query: 24 SQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
S+I++A +AL L+ ++ + + + P I KAC+ S F +HG ++K
Sbjct: 17 SKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTS-FNLGTAMHGCLIK 75
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
S + + +D Y K LD A + FD ++D SWN M+ G G + LC
Sbjct: 76 QGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCW 135
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F R Q + +++ + QA K S + H + G A +SV N+ +S YA+
Sbjct: 136 FIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAE 195
Query: 203 CNDLKMAELVFRGIEEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GFRPDVTT 260
+ + A +F E +R VVSW+ +IGG + + +R+M+ + G PD T
Sbjct: 196 VH-MYFAYKLFG--EMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVT 252
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VVS+L +C + + G +VH I G + D+ V N+LI MYSKC ++ SA F +
Sbjct: 253 VVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP 312
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ +SW M+S Y EAL L M G D VT+ + L++ K
Sbjct: 313 EKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTL---------ANVLQIAKH 363
Query: 381 F-DNYACSG--------GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
F D+ C G + N ++ N++ID Y+KC + AR +F + +K VV+W+TM
Sbjct: 364 FLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTM 423
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVY 490
IAG A NG+ EA+ +F QM E ++ PN V+ + +++AC + L + W + + +
Sbjct: 424 IAGFARNGKPDEAISVFKQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRR-- 480
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ E+ + + D+ + G ++ ++ +P K + W ++ A +I+
Sbjct: 481 GLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQK-NVVCWSAMISAFRIN 530
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 158/333 (47%), Gaps = 17/333 (5%)
Query: 18 TINQWNSQIREAVDKNEAH-KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
I WN + A NE+H +AL L M + E + +T + + D L + +
Sbjct: 315 NIISWNLML-SAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSV 373
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG I++ + S+ + +++D YAKC+ ++ A +FD M +DV +W+ MI GFA+ G
Sbjct: 374 HGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKP 433
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ + +F M I + V++M L +A + L K H + G+ ++V++ +
Sbjct: 434 DEAISVFKQMNEEVIPNN-VSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSI 492
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I Y+KC D++ + F I + + VV W+++I ++L + + +G +P
Sbjct: 493 IDMYSKCGDIEASIRAFNQIPQ--KNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKP 550
Query: 257 DVTTVVSLLSSCVCPEALVQG-----RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+ T +SLLS+C + +G +V HGI G + + ++ M S+ G +
Sbjct: 551 NAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEH----YSCIVDMLSRAGKFNE 606
Query: 312 ARFLFDGMCDRTRVS---WTAMISGYAQKGDLD 341
A L + + W ++S G++
Sbjct: 607 ALELIEKLPKEMEAGASIWGTLLSSCRSYGNIS 639
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR-PDVTTVVSLLSSCVCP 271
F + GLR + S I +Y + ++L Y + G + D + S+L +C
Sbjct: 3 FSNFQAGLR-LSDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKAC-SN 60
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+ G +H I G S+ N+ I Y K GD+DSA+ FD ++ VSW M+
Sbjct: 61 TSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMV 120
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
G G + L F A P++ ++L +I + G F Y G
Sbjct: 121 HGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFS 180
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQ 450
+ V N+L+ +Y++ + A +LF + + VVSW+ MI G GE + +F
Sbjct: 181 AILSVQNSLLSLYAEV-HMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRN 239
Query: 451 MM-ELDLRPNRVTFLAVLQACTH 472
M+ E + P+ VT ++VL+ACT+
Sbjct: 240 MVTEAGIPPDGVTVVSVLKACTN 262
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 311/584 (53%), Gaps = 7/584 (1%)
Query: 37 KALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+A LFR+M ++ P+++TF + C +H VK F ++ F+ +
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS 187
Query: 95 MVDMYAKCD--RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
V + + C+ RLD A LF+++P++D ++N +I G+ + G + + LF MR G Q
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
T G+ +A + +L + +H+ + G D SV N + Y+K + + ++
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + E VS+N +I + D+++ SL+F+R M GF ++LS
Sbjct: 308 FDEMPE--LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS 365
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+L GR +H + D + V N+L+ MY+KC + A +F + RT VSWTA+IS
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY QKG L+LF M + D T +++ +L LGK + G +
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
NV + L+DMY+KCGSI DA ++F +P++ VSW +I+ A NG+ A+ F +M+
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
E L+P+ V+ L VL AC+H GF+E+G YF M+ +Y + P+ HY+CM DLLGR G+
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-HSAAPYVEMANI 571
EA + MP + D +W ++L AC+IH+N + E A +LF +E AA YV M+NI
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNI 665
Query: 572 YALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YA G W+ V +++ M+ +KK P S V +N K F+ D
Sbjct: 666 YAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 709
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 216/471 (45%), Gaps = 17/471 (3%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+Y +M H + V + TM+ + K + A LFD MPDR V +W ++ +
Sbjct: 70 VYDEMPHKNTVST---------NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWY 120
Query: 131 AQMGFLEKVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
A+ ++ LF M D VT L A + + VH+F + +G D
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 189 D--VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
+ ++V N + +Y + L +A ++F I E + V++N++I G + +S++ +
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLF 238
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M G +P T +L + V G+ +H+ + GF D SV N ++ YSK
Sbjct: 239 LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
+ R LFD M + VS+ +IS Y+Q + +L F M+ G +M+
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S +L++G+ A + V N+L+DMY+KC +A +F +LP++T V
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SWT +I+G G L LF +M +LR ++ TF VL+A L G +
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI 478
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + + S + D+ + G +K+A+ + MP + +A W L+ A
Sbjct: 479 IRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
P + R V + I GFD D N ++ + G + +AR ++D M + VS M
Sbjct: 26 PATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTM 85
Query: 331 ISGYAQKGDL-------------------------------DEALRLFFAM--EAAGEVP 357
ISG+ + GD+ DEA +LF M ++ +P
Sbjct: 86 ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGDARE 415
D VT +++ GC + +A G N + V N L+ Y + + A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
LF +PEK V++ T+I G +G + E++ LF +M + +P+ TF VL+A
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 323/594 (54%), Gaps = 6/594 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK--NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS IR + +A FR + + + + P+ T + C+ + +IHG
Sbjct: 279 WNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGM 338
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
VK ++ V ++DMY+KC L A LF K+ ++ V SWN+MI +++ GF+ +
Sbjct: 339 AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFET 398
Query: 140 LCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L M + ++ + VT++ L A + L L+++H + + + N +I
Sbjct: 399 FDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFI 458
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+AYAKC L AE VF G+ ++V SWN++IGG +L+FY M G PD
Sbjct: 459 AAYAKCGSLVFAEHVFFGMNT--KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPD 516
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
++VSLL +C L G+ +H + G +++ V +L+S+Y C R F+
Sbjct: 517 DFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE 576
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M D+ V W AM+SGY+Q +EAL LF M + G PD + + S++ C Q AL L
Sbjct: 577 TMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGL 636
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK +A L ++ V +L+DMY+K G +G ++ +F L K V SW MI G +
Sbjct: 637 GKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGV 696
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G+ +A++LF M D +P+R TFL VLQAC HAG + +G Y M +Y++ PEL
Sbjct: 697 HGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELE 756
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ D+LGR G+L EAL+F+ MP + DA IW +LL + + ++E+GE A +L L
Sbjct: 757 HYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLAL 816
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
E + A Y+ ++N+YA G+WD V +R MK ++K G S + + GK +F
Sbjct: 817 EANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSF 870
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 239/464 (51%), Gaps = 7/464 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
QWN+ + V +A+ F + + +P+N TFP + KAC D + +HG
Sbjct: 176 QWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGM 235
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
VK D+FV M+ +Y KC LD A +LFDKMP++++ SWN++I GF++ GF +
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 295
Query: 140 LCLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
F ++ G+ D T++ L ++ + +H + +G+ ++ VCN I
Sbjct: 296 YRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALI 355
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC L A ++FR IE ++VVSWNS+IG + ++ + R M + +
Sbjct: 356 DMYSKCGCLSEAAILFRKIEN--KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELME 413
Query: 258 VT--TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
V T+++LL +C+ L+ R +H + + + F + N I+ Y+KCG + A +
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F GM ++ SW A+I G+AQ GD +AL +F M G +PD +++S++ CG+ G L
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ GK + GL+ N V +L+ +Y C R F + +K V W M++G
Sbjct: 534 QYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGY 593
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ N EAL LF QM+ L P+ + ++L AC+ L G
Sbjct: 594 SQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG 637
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 209/404 (51%), Gaps = 7/404 (1%)
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V S F D + T ++ MY+ C + +FD++ ++++ WNA++ G+ + ++ +
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAI 194
Query: 141 CLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
F + + Q D T L +A + L KSVH + +G+ D+ V N I+
Sbjct: 195 HTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIAL 254
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY--DGFRPD 257
Y KC L A +F + E + ++SWNS+I G + + ++ +R ++ DG PD
Sbjct: 255 YGKCGFLDEAVELFDKMPE--QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPD 312
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
V T+V+LL C + G ++H + G ++ V N LI MYSKCG + A LF
Sbjct: 313 VATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFR 372
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL--VTVLSMISGCGQSGAL 375
+ +++ VSW +MI Y+++G + E L M E+ ++ VT+L+++ C + L
Sbjct: 373 KIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESEL 432
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ Y+ + ++ NA I Y+KCGS+ A +F+ + K+V SW +I G
Sbjct: 433 LSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGH 492
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A NG+ ++ALD + +M L + P+ + +++L AC G L+ G
Sbjct: 493 AQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYG 536
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 295 VINT-LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V+NT LI+MYS CG +R +FD + ++ W A++SGY + DEA+ F + +
Sbjct: 144 VLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISV 203
Query: 354 GEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
E PD T +I C + LGK A GL ++ V NA+I +Y KCG + +
Sbjct: 204 TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDE 263
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL--DLRPNRVTFLAVLQAC 470
A ELF +PE+ ++SW ++I G + NG ++EA F ++E L P+ T + +L C
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVC 323
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+ G ++ G + K+ V+ EL + + D+ + G L EA + + KS
Sbjct: 324 SGEGNVDVGMVIHGMAVKLGLVH-ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS- 381
Query: 531 WGTLLCA 537
W +++ A
Sbjct: 382 WNSMIGA 388
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 5/299 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ +++ WN+ I + KAL + M + I P++ + + AC +L Y +
Sbjct: 479 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IHG ++++ + FV +++ +Y C + F+ M D++ WNAM+ G++Q
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 598
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M G++ D + + + A L L K VH F + + D V +
Sbjct: 599 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 658
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAK L ++ +F + + V SWN +I G + + ++ + M +
Sbjct: 659 LMDMYAKSGFLGHSQRIFNRLNG--KEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQ 716
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSA 312
PD T + +L +C C LV L + + Y + ++ +I M + G ++ A
Sbjct: 717 PDRFTFLGVLQAC-CHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEA 774
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 190/595 (31%), Positives = 315/595 (52%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I N+ +A LF M ++ I+P++++ + + + +H H++
Sbjct: 166 WTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVI 225
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + S + V +++D Y K L A++LF+ +P+RD ++NA++ G+++ GF + +
Sbjct: 226 KLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAIN 285
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ M+ VG + T + A I + + VH F + +V V N + Y+
Sbjct: 286 LFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYS 345
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + + A +F + E +S+N ++ + + +SL ++ + + GF
Sbjct: 346 KHDRVVEASKLFYEMPE--VDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPF 403
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+LLS L GR +HS I ++ V N+L+ MY+KCG+ A +F +
Sbjct: 404 ATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAI 463
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
++ V WTAMIS Y QKG ++ L+LF M+ A D T S++ C +L LGK
Sbjct: 464 QSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQL 523
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
++ G NV +AL+DMY+KCGSI DA ++F +P + VSW +I+ A NG+
Sbjct: 524 HSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDG 583
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
L LF +M+ L+P+ V+ L++L AC+H G +E+G YF+ MT++Y++ P+ HY+
Sbjct: 584 DCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYAS 643
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-H 560
D+L R G+ EA + MP + D +W ++L +C IH+N E+ + A +LF ++
Sbjct: 644 TIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLR 703
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
AAPYV M+NIYA G WD V ++ M+ VKK P S V I KT FT D
Sbjct: 704 DAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTAND 758
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 20/497 (4%)
Query: 47 KNDIEPNNLTFPFIAKACAKLSDF-----LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
K PN F+ K+ + D L+ +M H +IF TM+ Y K
Sbjct: 94 KTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPH---------KNIFSTNTMIMGYIK 144
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
L A LFD M R +W +I G+AQ + LF M GI D V++ L
Sbjct: 145 SGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATL 204
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
++ ++ VHS I +G D+ + V N+ + +Y K L +A +F I E R
Sbjct: 205 LSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPE--R 262
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
V++N+++ G + +++N + M G+RP T ++L++ + + + G+ VH
Sbjct: 263 DSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVH 322
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ F +V V N L+ YSK + A LF M + +S+ +++ YA G +
Sbjct: 323 GFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVK 382
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
E+L LF ++ G +++S S L++G+ + ++V N+L+
Sbjct: 383 ESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLV 442
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY+KCG G+A +F L ++ V WT MI+ G + L LF +M + +
Sbjct: 443 DMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAA 502
Query: 462 TFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
T+ ++++AC L G + +++ Y N + S + D+ + G +K+AL Q
Sbjct: 503 TYASIVRACASLASLTLGKQLHSHIIGSGYISN--VFSGSALVDMYAKCGSIKDALQMFQ 560
Query: 521 SMPIKSDAGIWGTLLCA 537
MP+++ W L+ A
Sbjct: 561 EMPVRNSVS-WNALISA 576
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 142/329 (43%), Gaps = 51/329 (15%)
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSA-------------------------------R 313
I GF+ + N L+ + + GD++ A R
Sbjct: 93 IKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEAR 152
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M RT V+WT +I GYAQ EA LF M G PD V++ +++SG +
Sbjct: 153 TLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFD 212
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
++ + ++ G ++V N+L+D Y K S+G A +LF +PE+ V++ ++
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLT 272
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK----- 488
G + G EA++LF +M E+ RP TF A+L A +E G + K
Sbjct: 273 GYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVW 332
Query: 489 -VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC-----KIHR 542
V+ N L+ YS + ++ EA MP GI +L C ++
Sbjct: 333 NVFVANALLDFYS-------KHDRVVEASKLFYEMP--EVDGISYNVLVTCYAWNGRVKE 383
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANI 571
++E+ + + + F+ A + +A I
Sbjct: 384 SLELFKELQFTGFDRRNFPFATLLSIAAI 412
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 205/601 (34%), Positives = 312/601 (51%), Gaps = 7/601 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L ++ + ++ NS +R +AL ++ M+ D +LTFPF AKACA L
Sbjct: 68 LAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD----HLTFPFAAKACAGLRL 123
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H + + F D +VQ ++ MY C + A +F M +R V SWNA+I G
Sbjct: 124 GRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAG 183
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G+ E+ L +F M G+ D TV+ + A AK L+ ++VH G+
Sbjct: 184 CVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDY 243
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V+V N I Y KC L+ A VF + + VVSW ++IG D+ ++++ M
Sbjct: 244 VAVKNALIDMYGKCRSLEDARRVFDHCKHD-KDVVSWTAMIGAYVLNDRAFEAISLGCQM 302
Query: 250 IYDGFR-PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+ G P+ T+V LLS+C + + H+ I G D++V LI Y++CG
Sbjct: 303 LMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGK 362
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ R + R +W A +SGY G +A+ LF M A PD T+ S++
Sbjct: 363 MKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPA 421
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
+S L+ GK + + G + + LID+YSK G + A LF LPEK VV+W
Sbjct: 422 YAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAW 481
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
TT+IAG ++G A+ L+ +M+E +PN VT +L AC+HAG +++G F M
Sbjct: 482 TTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRN 541
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
V+ + P HYSC+ D+LGR G+++EA +Q MP + +WG LL AC +H+N+E GE
Sbjct: 542 VHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGE 601
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A RLF+L+P + YV + NIYA RW V ++R MM + K PG SLV
Sbjct: 602 VAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARSVQ 661
Query: 609 C 609
C
Sbjct: 662 C 662
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 323/594 (54%), Gaps = 6/594 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK--NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS IR + +A FR + + + + P+ T + C+ + +IHG
Sbjct: 279 WNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGM 338
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
VK ++ V ++DMY+KC L A LF K+ ++ V SWN+MI +++ GF+ +
Sbjct: 339 AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFET 398
Query: 140 LCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L M + ++ + VT++ L A + L L+++H + + + N +I
Sbjct: 399 FDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFI 458
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+AYAKC L AE VF G+ ++V SWN++IGG +L+FY M G PD
Sbjct: 459 AAYAKCGSLVFAEHVFFGMNT--KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPD 516
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
++VSLL +C L G+ +H + G +++ V +L+S+Y C R F+
Sbjct: 517 DFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE 576
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M D+ V W AM+SGY+Q +EAL LF M + G PD + + S++ C Q AL L
Sbjct: 577 RMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGL 636
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK +A L ++ V +L+DMY+K G +G ++ +F L K V SW MI G +
Sbjct: 637 GKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGV 696
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G+ +A++LF M D +P+R TFL VLQAC HAG + +G Y M +Y++ PEL
Sbjct: 697 HGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELE 756
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ D+LGR G+L EAL+F+ MP + DA IW +LL + + ++E+GE A +L L
Sbjct: 757 HYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLAL 816
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
E + A Y+ ++N+YA G+WD V +R MK ++K G S + + GK +F
Sbjct: 817 EANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSF 870
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 239/464 (51%), Gaps = 7/464 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
QWN+ + V +A+ F + + +P+N TFP + KAC D + +HG
Sbjct: 176 QWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGM 235
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
VK D+FV M+ +Y KC LD A +LFDKMP++++ SWN++I GF++ GF +
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 295
Query: 140 LCLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
F ++ G+ D T++ L ++ + +H + +G+ ++ VCN I
Sbjct: 296 YRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALI 355
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC L A ++FR IE ++VVSWNS+IG + ++ + R M + +
Sbjct: 356 DMYSKCGCLSEAAILFRKIEN--KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELME 413
Query: 258 VT--TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
V T+++LL +C+ L+ R +H + + + F + N I+ Y+KCG + A +
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F GM ++ SW A+I G+AQ GD +AL +F M G +PD +++S++ CG+ G L
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ GK + GL+ N V +L+ +Y C R F + +K V W M++G
Sbjct: 534 QYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGY 593
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ N EAL LF QM+ L P+ + ++L AC+ L G
Sbjct: 594 SQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG 637
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 209/404 (51%), Gaps = 7/404 (1%)
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V S F D + T ++ MY+ C + +FD++ ++++ WNA++ G+ + ++ +
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAI 194
Query: 141 CLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
F + + Q D T L +A + L KSVH + +G+ D+ V N I+
Sbjct: 195 HTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIAL 254
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY--DGFRPD 257
Y KC L A +F + E + ++SWNS+I G + + ++ +R ++ DG PD
Sbjct: 255 YGKCGFLDEAVELFDKMPE--QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPD 312
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
V T+V+LL C + G ++H + G ++ V N LI MYSKCG + A LF
Sbjct: 313 VATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFR 372
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL--VTVLSMISGCGQSGAL 375
+ +++ VSW +MI Y+++G + E L M E+ ++ VT+L+++ C + L
Sbjct: 373 KIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESEL 432
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ Y+ + ++ NA I Y+KCGS+ A +F+ + K+V SW +I G
Sbjct: 433 LSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGH 492
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A NG+ ++ALD + +M L + P+ + +++L AC G L+ G
Sbjct: 493 AQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYG 536
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 295 VINT-LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V+NT LI+MYS CG +R +FD + ++ W A++SGY + DEA+ F + +
Sbjct: 144 VLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISV 203
Query: 354 GEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
E PD T +I C + LGK A GL ++ V NA+I +Y KCG + +
Sbjct: 204 TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDE 263
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL--DLRPNRVTFLAVLQAC 470
A ELF +PE+ ++SW ++I G + NG ++EA F ++E L P+ T + +L C
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVC 323
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+ G ++ G + K+ V+ EL + + D+ + G L EA + + KS
Sbjct: 324 SGEGNVDVGMVIHGMAVKLGLVH-ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS- 381
Query: 531 WGTLLCA 537
W +++ A
Sbjct: 382 WNSMIGA 388
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 5/299 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ +++ WN+ I + KAL + M + I P++ + + AC +L Y +
Sbjct: 479 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IHG ++++ + FV +++ +Y C + F++M D++ WNAM+ G++Q
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNEL 598
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M G++ D + + + A L L K VH F + + D V +
Sbjct: 599 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 658
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAK L ++ +F + + V SWN +I G + + ++ + M +
Sbjct: 659 LMDMYAKSGFLGHSQRIFNRLNG--KEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQ 716
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSA 312
PD T + +L +C C LV L + + Y + ++ +I M + G ++ A
Sbjct: 717 PDRFTFLGVLQAC-CHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEA 774
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 307/554 (55%), Gaps = 10/554 (1%)
Query: 70 FLYSQMIHGHIVKSPF----WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
LYS+ H ++ F + ++F T+++ YAK + A ++FD++P D+ S+N
Sbjct: 52 LLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNT 111
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
+I +A G L LF +R + D T+ G+ A + L++ +H F + G
Sbjct: 112 LIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIAC--GDDVGLVRQLHCFVVVCG 169
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLN 244
D SV N ++ Y++ L A VFR + EG R VSWN++I C + +++
Sbjct: 170 YDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVE 229
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+R M+ G + D+ T+ S+L++ C + LV G H I GF + V + LI +YS
Sbjct: 230 LFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYS 289
Query: 305 KC-GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE-ALRLFFAMEAAGEVPDLVTV 362
KC G + R +F+ + V W MISG++Q DL E + F M+ G PD +
Sbjct: 290 KCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSF 349
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALP 421
+ + S C + +GK A + N V V NAL+ MYSKCG++ DAR +F +P
Sbjct: 350 VCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP 409
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
E +VS +MIAG A +G VE+L LF M++ D+ PN +TF+AVL AC H G +E+G
Sbjct: 410 EHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQK 469
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YFN+M + +++ PE HYSCM DLLGR GKLKEA +++MP + W TLL AC+ H
Sbjct: 470 YFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKH 529
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
N+E+ A +LEP++AAPYV ++N+YA RW+ A ++ +M+ VKK PG S
Sbjct: 530 GNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSW 589
Query: 602 VHINGKTCTFTVED 615
+ I+ K F ED
Sbjct: 590 IEIDKKVHVFVAED 603
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 160/345 (46%), Gaps = 12/345 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I E +A+ LFR M + ++ + T + A + D + HG ++
Sbjct: 211 WNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMI 270
Query: 82 KSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL-EK 138
KS F + V + ++D+Y+KC ++C K+F+++ D+ WN MI GF+Q L E
Sbjct: 271 KSGFHGNSHVGSGLIDLYSKCAGGMVECR-KVFEEIAAPDLVLWNTMISGFSQYEDLSED 329
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 197
+ F M+ G D + + +T A + S+ K VH+ I + + VSV N +
Sbjct: 330 GIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALV 389
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y+KC ++ A VF + E +VS NS+I G +SL + M+ P+
Sbjct: 390 AMYSKCGNVHDARRVFDTMPE--HNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPN 447
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T +++LS+CV + +G + + + + + + +I + + G + A +
Sbjct: 448 TITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 317 DGMC-DRTRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGEVP 357
+ M + + W ++ + G+++ A++ F +E P
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAP 552
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS-- 311
F + T +LL +C+ L+ G+ +H+ + N +YSKCG + +
Sbjct: 5 FPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64
Query: 312 -----------------------------ARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
AR +FD + VS+ +I+ YA +G+
Sbjct: 65 TSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRP 124
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
ALRLF + D T+ +I CG + L + + G V NA++
Sbjct: 125 ALRLFAEVRELRFGLDGFTLSGVIIACGDD--VGLVRQLHCFVVVCGYDCYASVNNAVLA 182
Query: 403 MYSKCGSIGDARELFYALPE---KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
YS+ G + +AR +F + E + VSW MI C + E +EA++LF +M+ L+ +
Sbjct: 183 CYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVD 242
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T +VL A T L G + +M K
Sbjct: 243 MFTMASVLTAFTCVKDLVGGMQFHGMMIK 271
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 291/529 (55%), Gaps = 5/529 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH + SD+ V T ++ MYA+C +D A +LF ++ RD+ +W+A+I F Q G+
Sbjct: 10 IHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGY 69
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ L LF +M+ G+QA+ V ++ A L L KS+H + VD D+SV
Sbjct: 70 PQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTA 129
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGF 254
+S YAKC +A +F + + VV+WN++I G G+ F +L + +
Sbjct: 130 LVSMYAKCGFFALALTLFNRMP--CKDVVTWNAMINGYAQIGEPFP-ALEMFHKLQLSEL 186
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P+ T+V LL + L QG +H I GF+ + V LI MY+KCG + A F
Sbjct: 187 NPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEF 246
Query: 315 LFDGM-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LF C + VSW MI+GY G +A F M+ P++VT+++++
Sbjct: 247 LFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLS 306
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
AL G Y G + V N LIDMY+KCG + + ++F+ + K VSW M+A
Sbjct: 307 ALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLA 366
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A++G A++LF +M + ++R + +F+ VL AC HAG + +G F+ M+K +Q+
Sbjct: 367 GYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLE 426
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P+L HY+CMADLLGR G E LD ++SMP++ DAG+WG LL A +H N+++ E+ +
Sbjct: 427 PDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHH 486
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
L +LE + Y ++N YA GRW V N R+ + + ++K PG S V
Sbjct: 487 LDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 212/437 (48%), Gaps = 5/437 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V +AL LFR M+ ++ N + ACA++S + +H V
Sbjct: 57 WSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAV 116
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ DI V T +V MYAKC A LF++MP +DV +WNAMI G+AQ+G L
Sbjct: 117 KANVDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALE 176
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F+ ++L + + T++GL A L +H I G +++ V I YA
Sbjct: 177 MFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYA 236
Query: 202 KCNDLKMAELVFRGIEEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC L AE +F G R VSWN +I G + D+ + + M + +P++ T
Sbjct: 237 KCGSLSGAEFLFH--RTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVT 294
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+V++L + AL G +H++ I GF V N LI MY+KCG +D + +F M
Sbjct: 295 IVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMK 354
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
++ VSW M++GYA G A+ LF M+ + D + ++++S C +G + G K
Sbjct: 355 NKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRK 414
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
FD+ + L+ ++ + D+ + G + +L ++P E W ++ ++
Sbjct: 415 IFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMH 474
Query: 439 GEFVEALDLFHQMMELD 455
A H + +L+
Sbjct: 475 SNVQLAEFALHHLDKLE 491
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
AL +G +H G D DV+V +++MY++CG++D+A+ LF + R V+W+A+I
Sbjct: 2 RALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAII 61
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
+ + Q G EAL LF +M+ G + V +LS + C + +L+LGK A +
Sbjct: 62 AAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVD 121
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
++ V AL+ MY+KCG A LF +P K VV+W MI G A GE AL++FH++
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKL 181
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
+L PN T + +L A L++G + K E + + + D+ + G
Sbjct: 182 QLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKC-GFESECHVKTALIDMYAKCGS 240
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
L A + D W ++ A +H I + A+ +LE
Sbjct: 241 LSGAEFLFHRTGCRKDEVSWNVMI-AGYMHSGHAIDAFSAFCQMKLE 286
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 313/598 (52%), Gaps = 8/598 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE--PNNLTFPFIAKACAKLSDFLYSQ 74
S++ +N IR V + H A+ +F RM ++ P+ T+PF+AKA +L
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++HG I++S F D +VQ ++ MY +++ A +FD M +RDV SWN MI G+ + G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ L +F M + D T++ + H K L + ++VH + + V N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
++ Y KC + A VF +E R V++W +I G T +++L R M ++G
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMER--RDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
RP+ T+ SL+S C + G+ +H + D+ + +LISMY+KC +D
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F G W+A+I+G Q + +AL LF M P++ T+ S++
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK----TVVSWTT 430
L Y G ++ L+ +YSKCG++ A ++F + EK VV W
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I+G ++G+ AL +F +M+ + PN +TF + L AC+H+G +E+G F M + Y
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ NHY+C+ DLLGR G+L EA + + ++P + + +WG LL AC H N+++GE
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A +LFELEP + YV +ANIYA GRW + +R+MM+ ++K PG S + I +
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNS 673
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 224/474 (47%), Gaps = 9/474 (1%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H H++ S + T V YA C + A KLF++MP + S+N +I + +
Sbjct: 34 TKALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVR 92
Query: 133 MGFLEKVLCLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
G + +F M G++ D T + +AA K + L VH + D
Sbjct: 93 EGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK 152
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N ++ Y ++MA VF ++ R V+SWN++I G +D+L + M+
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKN--RDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ D T+VS+L C + L GR VH + V N L++MY KCG +D
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
ARF+FD M R ++WT MI+GY + GD++ AL L M+ G P+ VT+ S++S CG
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ + GK +A + ++++ +LI MY+KC + +F + W+
Sbjct: 331 DALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSA 390
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+IAGC N +AL LF +M D+ PN T ++L A L + +TK
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTG 450
Query: 491 QVNPELNHYSCMADLLGRKGKLKEA---LDFVQSMPIKSDAGIWGTLLCACKIH 541
++ L+ + + + + G L+ A + +Q D +WG L+ +H
Sbjct: 451 FMSS-LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 207/433 (47%), Gaps = 16/433 (3%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ ++ + WN+ I + AL++F M ++ ++ T + C L D
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H + + I V+ +V+MY KC R+D A +FD+M RDV +W MI G+ +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G +E L L M+ G++ + VT+ L A ++ K +H + + V +D+ +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ IS YAKC + + VF G + W++II GC + D+L ++ M +
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASK--YHTGPWSAIIAGCVQNELVSDALGLFKRMRRE 414
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
P++ T+ SLL + L Q +H + GF + L+ +YSKCG ++SA
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 313 RFLFDGMCDRTR----VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+F+G+ ++ + V W A+ISGY GD AL++F M +G P+ +T S ++
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 369 CGQSGALELGK-----WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-E 422
C SG +E G ++Y + N C ++D+ + G + +A L +P E
Sbjct: 535 CSHSGLVEEGLTLFRFMLEHYKTLA--RSNHYTC--IVDLLGRAGRLDEAYNLITTIPFE 590
Query: 423 KTVVSWTTMIAGC 435
T W ++A C
Sbjct: 591 PTSTVWGALLAAC 603
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 5/275 (1%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL+ +++ + + +H H I G + +++TL Y+ CG I AR LF+ M
Sbjct: 20 SLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQS 78
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--VPDLVTVLSMISGCGQSGALELGKW 380
+ +S+ +I Y ++G +A+ +F M + G VPD T + G+ +++LG
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ V NAL+ MY G + AR++F + + V+SW TMI+G NG
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+AL +F M+ + + T +++L C H LE G L+ + ++ ++ +
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE-KRLGDKIEVKN 257
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ ++ + G++ EA FV + D W ++
Sbjct: 258 ALVNMYLKCGRMDEA-RFVFDRMERRDVITWTCMI 291
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 303/593 (51%), Gaps = 2/593 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I AL LF RM + P+ AC+ L + IHG+
Sbjct: 189 WNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAY 248
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S +D V ++D+Y KC RL A KLFD M R++ SW MI G+ Q F + +
Sbjct: 249 RSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAIT 308
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F+NM G Q D + + + + +H+ I ++AD V N I YA
Sbjct: 309 MFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYA 368
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + E +S+N++I G + +++N ++ M + RP + T
Sbjct: 369 KCEHLTEARAVFDALAED--DAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTF 426
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VSLL A+ + +H I G LD+ + LI +YSKC ++ A+ +F+ +
Sbjct: 427 VSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHY 486
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W +MI G+AQ +EA++LF + +G P+ T +++++ ++ G+ F
Sbjct: 487 KDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQF 546
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G+ ++ V NALIDMY+KCG I + R LF + + V+ W +MI A +G
Sbjct: 547 HAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHA 606
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL +F M E ++ PN VTF+ VL AC HAGF+ +G +FN M Y + P + HY+
Sbjct: 607 EEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYAS 666
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ +L GR GKL A +F++ MPIK A +W +LL AC + N EIG Y A +P
Sbjct: 667 VVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTD 726
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
+ PYV ++NIYA G W V NLR M + K G S + + + TF V
Sbjct: 727 SGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVR 779
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/543 (28%), Positives = 260/543 (47%), Gaps = 9/543 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W S I A+ LF +K E PN + +AC + + +HG
Sbjct: 87 WGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIA 146
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK ++++V T ++++YAK +D A +F +P R +WN +I G+AQ+G L
Sbjct: 147 VKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVAL 206
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M + G++ D + A L + +H + + D SV N I Y
Sbjct: 207 ELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLY 266
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC+ L A +F +E R +VSW ++I G +++ + +M G++PD
Sbjct: 267 CKCSRLSAARKLFDCME--YRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFA 324
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+L+SC A+ QGR +H+H I + D V N LI MY+KC + AR +FD +
Sbjct: 325 CTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALA 384
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +S+ AMI GY++ DL EA+ +F M P L+T +S++ A+EL K
Sbjct: 385 EDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQ 444
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G ++ +ALID+YSKC + DA+ +F L K +V W +MI G A N +
Sbjct: 445 IHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQ 504
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA+ LF+Q++ + PN TF+A++ + + G + + K V+ + + +
Sbjct: 505 GEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKA-GVDNDPHVSN 563
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF---EL 557
+ D+ + G +KE +S D W +++ H + E V +RL E+
Sbjct: 564 ALIDMYAKCGFIKEGRMLFES-TCGEDVICWNSMITTYAQHGHAEEALQV-FRLMGEAEV 621
Query: 558 EPH 560
EP+
Sbjct: 622 EPN 624
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 207/394 (52%), Gaps = 5/394 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH + D+F+ ++ Y+ RL A LFD+MP R++ SW ++I + Q G
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99
Query: 136 LEKVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ + LF + + +F+ + + +A +K +SL + VH + + +DA+V V
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFL-LASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVG 158
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
I+ YAK + A LVF + +RT V+WN++I G +L + M +G
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALP--VRTPVTWNTVITGYAQIGCGGVALELFDRMGIEG 216
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
RPD + S +S+C L GR +H + + D SVIN LI +Y KC + +AR
Sbjct: 217 VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAAR 276
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M R VSWT MISGY Q EA+ +F+ M AG PD S+++ CG
Sbjct: 277 KLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLA 336
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
A+ G+ + L+ + V NALIDMY+KC + +AR +F AL E +S+ MI
Sbjct: 337 AIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIE 396
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + N + EA+++F +M LRP+ +TF+++L
Sbjct: 397 GYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL 430
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 181/392 (46%), Gaps = 11/392 (2%)
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L ++H+ G D+ + N + Y+ L+ A +F + R +VSW S+I
Sbjct: 36 LNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPH--RNLVSWGSVISM 93
Query: 233 CTYGDKFDDSLNFYRHMIYDGFR-PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
T + D +++ + P+ + S+L +C +A+ G VH + D
Sbjct: 94 YTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDA 153
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V V LI++Y+K G +D A +F + RT V+W +I+GYAQ G AL LF M
Sbjct: 154 NVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMG 213
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G PD + S +S C G LE G+ YA + + V N LID+Y KC +
Sbjct: 214 IEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLS 273
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
AR+LF + + +VSWTTMI+G N EA+ +F M + +P+ ++L +C
Sbjct: 274 AARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSC- 332
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
G L W + V + + E + Y + + D+ + L EA ++ + DA
Sbjct: 333 --GSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALA-EDDAI 389
Query: 530 IWGTLLCACKIHRNI--EIGEYVAYRLFELEP 559
+ ++ +R++ + + R F L P
Sbjct: 390 SYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRP 421
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 327/598 (54%), Gaps = 8/598 (1%)
Query: 23 NSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
N+ + +N+ +K AL LF ++++ + + + K C L D + + +H +
Sbjct: 60 NNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCI 119
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F D+ V T++VDMY K + ++ ++FD+M ++V SW +++ G+ Q G E+ L
Sbjct: 120 KCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALK 179
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+L GI+ + T + + VH+ I G+D+ + V N+ ++ Y+
Sbjct: 180 LFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYS 239
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
K + A+ VF +E R VSWNS+I G T G + FYR M +G + T
Sbjct: 240 KSLMVSDAKAVFDSMEN--RNAVSWNSMIAGFVTNGLDLEAFELFYR-MRLEGVKLTQTI 296
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++ C + + + +H I G D D+++ L+ YSKC +ID A LF M
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMH 356
Query: 321 D-RTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQ-SGALEL 377
+ VSWTA+ISGY Q G D A+ LF M G P+ T S+++ C + ++E
Sbjct: 357 GVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQ 416
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK F + + G + + V +AL+ MY+K G+I A E+F ++ +VSW +MI+G A
Sbjct: 417 GKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQ 476
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G ++L +F +M +L + +TF+ V+ ACTHAG + +G YF+LM K Y + P +
Sbjct: 477 HGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTME 536
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HYSCM DL R G L++A+D + MP + A IW TLL AC++H N+++GE A +L L
Sbjct: 537 HYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISL 596
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+P +A YV ++NIYA G W A +R +M +VKK G S + + KT +F D
Sbjct: 597 QPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGD 654
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 220/431 (51%), Gaps = 11/431 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W S + +AL LF +M+ I+PN TF + A
Sbjct: 154 RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGV 213
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H ++KS S IFV +MV+MY+K + A +FD M +R+ SWN+MI GF G
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273
Query: 135 FLEKVLCLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ LFY MRL G+ Q F TV+ L + K +S K +H I G D D++
Sbjct: 274 LDLEAFELFYRMRLEGVKLTQTIFATVIKL---CANIKEMSFAKQLHCQVIKNGSDFDLN 330
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ + AY+KC+++ A +F + G++ VVSW +II G + D ++N + M
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLF-CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 252 -DGFRPDVTTVVSLLSSCVCPEALV-QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G P+ T S+L++C P A V QG+ HS I GF + V + L++MY+K G+I
Sbjct: 390 EEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNI 449
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+SA +F DR VSW +MISGYAQ G ++L++F M + D +T + +IS C
Sbjct: 450 ESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISAC 509
Query: 370 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVS 427
+G + G ++FD + + + ++D+YS+ G + A +L +P
Sbjct: 510 THAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATI 569
Query: 428 WTTMIAGCALN 438
W T++A C ++
Sbjct: 570 WRTLLAACRVH 580
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 314/597 (52%), Gaps = 5/597 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + + F M + I P+ + I ++C L +M+H IV
Sbjct: 135 WTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIV 194
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F + IFV T++++MYAK ++ +Y +F+ M + + SWNAMI G G +
Sbjct: 195 MRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFD 254
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ + T++ +++A +++ K V + +G++ +V V I Y+
Sbjct: 255 LFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYS 314
Query: 202 KCNDLKMAELVFRG--IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
KC L A VF I G+ T WN++I G + ++L Y M +G D+
Sbjct: 315 KCGSLHDARSVFDTNFINCGVNT--PWNAMISGYSQSGCSQEALELYVQMCQNGITSDLY 372
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDG 318
T S+ ++ ++L GR+VH + G DL VSV N + YSKCG ++ R +FD
Sbjct: 373 TYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDR 432
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M +R VSWT +++ Y+Q +EAL F M G P+ T S++ C LE G
Sbjct: 433 MEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYG 492
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ C GL + +ALIDMY+KCGSI +A ++F + +VSWT +I+G A +
Sbjct: 493 RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQH 552
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +AL LF +M ++ N VT L VL AC+H G +E+G YF M Y V PE+ H
Sbjct: 553 GLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEH 612
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ DLLGR G+L +A++F++ MP++ + +W TLL C++H N+E+GE A ++ +
Sbjct: 613 YACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIR 672
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P +A YV ++N Y G ++ +LR +MK VKK PG S + + G+ F D
Sbjct: 673 PEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGD 729
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 220/461 (47%), Gaps = 8/461 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFW-SDIFVQ-TTMVDMYAKCDRLDCAYKLFDKMPD 117
+ + CA+ ++ +HG ++KS F D+ V +Y+KC A +FD+MP
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
R+V SW MIVG + G F M GI D + Q+ I L L K V
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H+ + G + V + ++ YAK ++ + VF + E VSWN++I GCT
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE--HNQVSWNAMISGCTSNG 247
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
++ + + M P++ T+VS+ + + G+ V + G + +V V
Sbjct: 248 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 307
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVS--WTAMISGYAQKGDLDEALRLFFAMEAAGE 355
LI MYSKCG + AR +FD V+ W AMISGY+Q G EAL L+ M G
Sbjct: 308 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 367
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDAR 414
DL T S+ + S +L+ G+ GL V+ V NA+ D YSKCG + D R
Sbjct: 368 TSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVR 427
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F + E+ +VSWTT++ + + EAL F M E PN+ TF +VL +C
Sbjct: 428 KVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLC 487
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
FLE G L+ K ++ E S + D+ + G + EA
Sbjct: 488 FLEYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEA 527
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 185/373 (49%), Gaps = 19/373 (5%)
Query: 175 KSVHSFGIHIGV-DADVSVC-NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
K+VH + D D+ V N Y+KC++ + A VF + + R V SW +I G
Sbjct: 84 KAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ--RNVFSWTVMIVG 141
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
T F D F+ M+ G PD +++ SC+ ++L G++VH+ + GF
Sbjct: 142 STEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATH 201
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ V +L++MY+K G I+ + ++F+ M + +VSW AMISG G EA LF M+
Sbjct: 202 IFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKN 261
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
P++ T++S+ G+ + +GK N A G++ NV+V ALIDMYSKCGS+ D
Sbjct: 262 GACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHD 321
Query: 413 ARELFYA--LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
AR +F + W MI+G + +G EAL+L+ QM + + + T+ +V A
Sbjct: 322 ARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAI 381
Query: 471 THAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
+ L+ G ++ K V VN + +AD + G L++ M
Sbjct: 382 AASKSLQFGRVVHGMVLKCGLDLMVVSVN------NAIADAYSKCGFLEDVRKVFDRME- 434
Query: 525 KSDAGIWGTLLCA 537
+ D W TL+ A
Sbjct: 435 ERDIVSWTTLVTA 447
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + + + +AL F M++ PN TF + +CA L Y + +HG
Sbjct: 438 IVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHG 497
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ K+ ++ +++ ++DMYAKC + A K+FDK+ + D+ SW A+I G+AQ G +E
Sbjct: 498 LLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVED 557
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
L LF M L GI+A+ VT++ + A H
Sbjct: 558 ALQLFRRMELSGIKANAVTLLCVLFACSHG 587
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 322/601 (53%), Gaps = 3/601 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ T W + I + +L LF +M++ D+ P+ + AC+ L +
Sbjct: 216 KVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGK 275
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG++++ F D+ V ++D Y KC ++ KLF+++ D+DV SW MI G Q
Sbjct: 276 QIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNS 335
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
F + LF M G + D + + + L + VH++ I + +D D V N
Sbjct: 336 FHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKN 395
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I YAKC+ L A VF + VVS+N++I G + DK ++L+ +R M
Sbjct: 396 GLIDMYAKCDSLTNARKVFDLV--AAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLS 453
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P + T VSLL L +H I +G LD + LI +YSKC + AR
Sbjct: 454 PPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARL 513
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+ + DR V W AM SGY+Q+ + +E+L+L+ ++ + P+ T ++I+ +
Sbjct: 514 VFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIAS 573
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L G+ F N GL D+ V N+L+DMY+KCGSI ++ + F + ++ + W +MI+
Sbjct: 574 LRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMIST 633
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A +G+ +AL++F +M+ ++PN VTF+ +L AC+HAG L+ G+ +F M+K + + P
Sbjct: 634 YAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSK-FGIEP 692
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
++HY+CM LLGR GK+ EA +FV+ MPIK A +W +LL AC++ ++E+G Y A
Sbjct: 693 GIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMA 752
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
+P + Y+ ++NI+A G W V +R M ++V K PG S + +N + F
Sbjct: 753 ISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIAR 812
Query: 615 D 615
D
Sbjct: 813 D 813
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/521 (30%), Positives = 264/521 (50%), Gaps = 5/521 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLF-RRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+S + + +ALLLF R M+ +PN + +AC +L + + +HG +
Sbjct: 121 WSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFV 180
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK F D++V T+++D YAK +D A +FD + + +W A+I G+A++G E L
Sbjct: 181 VKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSL 240
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF MR + D + + A + L K +H + + G D DVSV N I Y
Sbjct: 241 KLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFY 300
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC+ +K +F + + + VVSW ++I GC D+++ + M+ G++PD
Sbjct: 301 LKCHKVKTGRKLFNRLVD--KDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFG 358
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+L+SC +AL +GR VH++ I D D V N LI MY+KC + +AR +FD +
Sbjct: 359 CTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVA 418
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
VS+ AMI GY+++ L EAL LF M + P L+T +S++ LEL
Sbjct: 419 AINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQ 478
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G+ + +ALID+YSKC +GDAR +F + ++ +V W M +G + E
Sbjct: 479 IHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLE 538
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
E+L L+ + L+PN TF AV+ A ++ L G + N + K+ ++ + +
Sbjct: 539 NEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKM-GLDDDPFVTN 597
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ D+ + G ++E+ S + D W +++ H
Sbjct: 598 SLVDMYAKCGSIEESHKAFSSTN-QRDIACWNSMISTYAQH 637
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 208/395 (52%), Gaps = 4/395 (1%)
Query: 72 YSQMIHGHIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
Y + IH HIV F D+F+ T++ Y+K + A KLFD MP R++ +W++M+ +
Sbjct: 69 YYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMY 128
Query: 131 AQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
Q G+ + L LF MR + + + + +A +LS +H F + G D
Sbjct: 129 TQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQD 188
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + I YAK + A L+F G++ ++T V+W +II G + + SL + M
Sbjct: 189 VYVGTSLIDFYAKRGYVDEARLIFDGLK--VKTTVTWTAIIAGYAKLGRSEVSLKLFNQM 246
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
PD + S+LS+C E L G+ +H + + GFD+DVSV+N +I Y KC +
Sbjct: 247 REGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKV 306
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ R LF+ + D+ VSWT MI+G Q +A+ LF M G PD S+++ C
Sbjct: 307 KTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSC 366
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
G AL+ G+ YA + ++ V N LIDMY+KC S+ +AR++F + VVS+
Sbjct: 367 GSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYN 426
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
MI G + + VEALDLF +M P +TF+
Sbjct: 427 AMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFV 461
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Query: 280 VHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H+H + GF DV ++NTL+ YSK A+ LFD M R V+W++M+S Y Q G
Sbjct: 73 IHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHG 132
Query: 339 DLDEALRLFFA-MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
EAL LF M + E P+ + S++ C Q G L + GG +V V
Sbjct: 133 YSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVG 192
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+LID Y+K G + +AR +F L KT V+WT +IAG A G +L LF+QM E D+
Sbjct: 193 TSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVY 252
Query: 458 PNRVTFLAVLQACTHAGFLEKG 479
P+R +VL AC+ FLE G
Sbjct: 253 PDRYVISSVLSACSMLEFLEGG 274
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/656 (30%), Positives = 326/656 (49%), Gaps = 84/656 (12%)
Query: 1 MAASSLPPRLNK----IYRSSTINQWN----SQIREAVDKNEAHKALLLFRRMKKNDIEP 52
MA S +NK + R N W + R + N H A L++ M N +
Sbjct: 152 MAPSRKSRSVNKGFLLLMRYPQANTWKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGA 211
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+N T+P + +AC+ ++ +H H++K F SD++V+ T+++ ++ C + A ++F
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 271
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKH 170
++ D SWN+++ G+ ++G +E+ +++ M R + + + G+ + A
Sbjct: 272 NESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACK 331
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L F + E + +V+W+++I
Sbjct: 332 L-----------------------------------------FDEMLE--KDMVTWSALI 348
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ +++++ + M G D VS LS+C + G+L+HS + G +
Sbjct: 349 ACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTE 408
Query: 291 LDVSVINTLISMYSKCGDI-------------------------------DSARFLFDGM 319
+++ N LI MYSKCGDI D+A+ +FD M
Sbjct: 409 SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSM 468
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ VSW++MISGYAQ DE L LF M+ +G PD T++S+IS C + ALE GK
Sbjct: 469 PEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGK 528
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
W Y GL NV++ LIDMY KCG + A E+FY + EK + +W +I G A+NG
Sbjct: 529 WVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNG 588
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+LD+F M + + PN +TF+ VL AC H G +++G +F M +++ P + HY
Sbjct: 589 LVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHY 648
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
CM DLLGR GKL+EA + + MP+ D WG LL ACK H + E+G V +L EL+P
Sbjct: 649 GCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQP 708
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+V ++NIYA G+WD V +R MM +++V K PG S++ NG F D
Sbjct: 709 DHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGD 764
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/611 (32%), Positives = 328/611 (53%), Gaps = 8/611 (1%)
Query: 11 NKIYRSST---INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
K++ ST I WN+ + V + + +F+ M++ D+E ++ TF + AC L
Sbjct: 379 KKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINL 438
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +H +K+ +D+FV M+DMY+K +D A LF +P +D SWNA+I
Sbjct: 439 YSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALI 498
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
VG A + + + M+ GI D V+ A + + K +HS I V
Sbjct: 499 VGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVC 558
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
++ +V ++ I Y+K D++ + V ++ ++V N++I G ++ D+++ ++
Sbjct: 559 SNHAVGSSLIDLYSKFGDVESSRKVLAHVDAS--SIVPINALITGLVQNNREDEAIELFQ 616
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKC 306
++ DGF+P T S+LS C P + V G+ VH + + + D S+ +L+ +Y KC
Sbjct: 617 QVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKC 676
Query: 307 GDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
++ A L + + D + V WTA ISGYAQ G ++L +F+ M + D T S+
Sbjct: 677 KLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSV 736
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-T 424
+ C + AL GK G +AL+DMYSKCG + + E+F L +
Sbjct: 737 LKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQN 796
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
++ W +MI G A NG EAL LF +M E ++P+ VT L VL AC+HAG + +G +F+
Sbjct: 797 IMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFD 856
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
M++VY + P ++HY+C+ DLLGR G L++A + + +P ++D IW T L AC++H++
Sbjct: 857 SMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDE 916
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
E G+ A +L E+EP S++ YV +++++A G W R M+ V KFPG S + +
Sbjct: 917 ERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITV 976
Query: 605 NGKTCTFTVED 615
K F V+D
Sbjct: 977 GNKQSVFVVQD 987
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/528 (28%), Positives = 269/528 (50%), Gaps = 6/528 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L +I +ST+ WN+ I + L++ MKK + P TF I A A ++
Sbjct: 281 LKRIRMTSTV-AWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTA 339
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
F + IH VK +++FV ++++++Y K + A K+FD ++++ WNA++ G
Sbjct: 340 FDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYG 399
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F Q E+ + +F MR ++AD T + + A I+ L L + VH I G+DAD
Sbjct: 400 FVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDAD 459
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V N + Y+K + +A+ +F I ++ VSWN++I G + ++ +++N + M
Sbjct: 460 LFVANAMLDMYSKLGAIDVAKALFSLIP--VKDSVSWNALIVGLAHNEEEGEAINMLKRM 517
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+ G D + + +++C A+ G+ +HS I Y + +V ++LI +YSK GD+
Sbjct: 518 KFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDV 577
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+S+R + + + V A+I+G Q DEA+ LF + G P T S++SGC
Sbjct: 578 ESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGC 637
Query: 370 GQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVS 427
+ + +GK Y S L + + +L+ +Y KC + DA +L +P+ K +V
Sbjct: 638 TRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVE 697
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT I+G A NG V++L +F +M D+R + TF +VL+AC+ L G L+
Sbjct: 698 WTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIV 757
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K V+ E S + D+ + G + + + + + + + W +++
Sbjct: 758 KSGFVSYE-TATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMI 804
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 204/428 (47%), Gaps = 37/428 (8%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P+ + AC++L + + +H ++KS F S +F Q +VDMYAKC +D A ++
Sbjct: 155 PDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRM 214
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
FD + D W +MI G+ ++G ++ L LF M +G D VT
Sbjct: 215 FDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVT-------------- 260
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
C T IS A L A + + I + + V+WN++I
Sbjct: 261 ---------------------CVTIISTLASMGRLGDARTLLKRIR--MTSTVAWNAVIA 297
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ + Y+ M G P +T S+LS+ A +GR +H+ + +G D
Sbjct: 298 SYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDA 357
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V V ++LI++Y K G I A+ +FD ++ V W A++ G+ Q +E +++F M
Sbjct: 358 NVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMR 417
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
A D T +S++ C +L+LG+ G+ ++ V NA++DMYSK G+I
Sbjct: 418 RADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAID 477
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A+ LF +P K VSW +I G A N E EA+++ +M + + V+F + AC+
Sbjct: 478 VAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACS 537
Query: 472 HAGFLEKG 479
+ +E G
Sbjct: 538 NIWAIETG 545
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 103/235 (43%), Gaps = 35/235 (14%)
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
F R G PD + +LS+C AL GR VH + GF V L+ MY+
Sbjct: 144 FQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYA 203
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCG++D AR +FDG+ + WT+MI+GY + G +AL LF ME G VPD VT
Sbjct: 204 KCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVT--- 260
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
C +I + G +GDAR L + +
Sbjct: 261 --------------------------------CVTIISTLASMGRLGDARTLLKRIRMTS 288
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
V+W +IA + +G E L+ M + L P R TF ++L A + ++G
Sbjct: 289 TVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEG 343
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFLFDGMCD---RTRVSWTAMISGY 334
++H+ + G L + + L+ +Y + G + A R L C + + ++++S +
Sbjct: 74 VLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRAL--ACCTGAPASSAAASSVLSCH 131
Query: 335 AQKGDLDEALRLFFAMEAA-GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
A+ G + L F + + G PD + ++S C + GALE G+ G +
Sbjct: 132 ARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSS 191
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V L+DMY+KCG + DAR +F + + WT+MIAG G + +AL LF +M +
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEK 251
Query: 454 LDLRPNRVTFLAVLQACTHAGFL 476
+ P++VT + ++ G L
Sbjct: 252 MGSVPDQVTCVTIISTLASMGRL 274
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 314/597 (52%), Gaps = 5/597 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + + F M + I P+ + I ++C L +M+H IV
Sbjct: 189 WTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIV 248
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F + IFV T++++MYAK ++ +Y +F+ M + + SWNAMI G G +
Sbjct: 249 MRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFD 308
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ + T++ +++A +++ K V + +G++ +V V I Y+
Sbjct: 309 LFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYS 368
Query: 202 KCNDLKMAELVFRG--IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
KC L A VF I G+ T WN++I G + ++L Y M +G D+
Sbjct: 369 KCGSLHDARSVFDTNFINCGVNT--PWNAMISGYSQSGCSQEALELYVQMCQNGITSDLY 426
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDG 318
T S+ ++ ++L GR+VH + G DL VSV N + YSKCG ++ R +FD
Sbjct: 427 TYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDR 486
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M +R VSWT +++ Y+Q +EAL F M G P+ T S++ C LE G
Sbjct: 487 MEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYG 546
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ C GL + +ALIDMY+KCGSI +A ++F + +VSWT +I+G A +
Sbjct: 547 RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQH 606
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +AL LF +M ++ N VT L VL AC+H G +E+G YF M Y V PE+ H
Sbjct: 607 GLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEH 666
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ DLLGR G+L +A++F++ MP++ + +W TLL C++H N+E+GE A ++ +
Sbjct: 667 YACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIR 726
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P +A YV ++N Y G ++ +LR +MK VKK PG S + + G+ F D
Sbjct: 727 PEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGD 783
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 220/461 (47%), Gaps = 8/461 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFW-SDIFVQ-TTMVDMYAKCDRLDCAYKLFDKMPD 117
+ + CA+ ++ +HG ++KS F D+ V +Y+KC A +FD+MP
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
R+V SW MIVG + G F M GI D + Q+ I L L K V
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H+ + G + V + ++ YAK ++ + VF + E VSWN++I GCT
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE--HNQVSWNAMISGCTSNG 301
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
++ + + M P++ T+VS+ + + G+ V + G + +V V
Sbjct: 302 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 361
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVS--WTAMISGYAQKGDLDEALRLFFAMEAAGE 355
LI MYSKCG + AR +FD V+ W AMISGY+Q G EAL L+ M G
Sbjct: 362 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 421
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDAR 414
DL T S+ + S +L+ G+ GL V+ V NA+ D YSKCG + D R
Sbjct: 422 TSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVR 481
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F + E+ +VSWTT++ + + EAL F M E PN+ TF +VL +C
Sbjct: 482 KVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLC 541
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
FLE G L+ K ++ E S + D+ + G + EA
Sbjct: 542 FLEYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEA 581
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 180/360 (50%), Gaps = 18/360 (5%)
Query: 187 DADVSVC-NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D D+ V N Y+KC++ + A VF + + R V SW +I G T F D F
Sbjct: 151 DKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ--RNVFSWTVMIVGSTEHGLFFDGFKF 208
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M+ G PD +++ SC+ ++L G++VH+ + GF + V +L++MY+K
Sbjct: 209 FCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAK 268
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
G I+ + ++F+ M + +VSW AMISG G EA LF M+ P++ T++S+
Sbjct: 269 LGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSV 328
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA--LPEK 423
G+ + +GK N A G++ NV+V ALIDMYSKCGS+ DAR +F +
Sbjct: 329 SKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 388
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
W MI+G + +G EAL+L+ QM + + + T+ +V A + L+ G
Sbjct: 389 VNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVH 448
Query: 484 NLMTK------VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
++ K V VN + +AD + G L++ M + D W TL+ A
Sbjct: 449 GMVLKCGLDLMVVSVN------NAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA 501
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + + + +AL F M++ PN TF + +CA L Y + +HG
Sbjct: 492 IVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHG 551
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ K+ ++ +++ ++DMYAKC + A K+FDK+ + D+ SW A+I G+AQ G +E
Sbjct: 552 LLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVED 611
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
L LF M L GI+A+ VT++ + A H
Sbjct: 612 ALQLFRRMELSGIKANAVTLLCVLFACSHG 641
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 292/543 (53%), Gaps = 3/543 (0%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H +++ S + ++ +Y L A +F + V +W ++I F
Sbjct: 24 AKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ L F MR G D + ++ L +SVH F + +G+D D+
Sbjct: 83 QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N ++ Y+K + VF + + VVS+N++I G ++D+L R M
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPR--KDVVSYNTVIAGYAQSGMYEDALRMVREMGTS 200
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+PD T+ S+L +++G+ +H + I G D DV + ++L+ MY+K I+ +
Sbjct: 201 DLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 260
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F + R +SW ++++GY Q G +EALRLF M +A P V S+I C
Sbjct: 261 ERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHL 320
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L LGK Y GG N+ + +AL+DMYSKCG+I AR++F + VSWT +I
Sbjct: 321 ATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAII 380
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
G AL+G EA+ LF +M ++PN+V F+AVL AC+H G +++ WGYFN MTKVY +
Sbjct: 381 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 440
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
N EL HY+ +ADLLGR GKL+EA DF+ M ++ +W TLL +C +H+N+E+ E VA
Sbjct: 441 NQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAE 500
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
++F ++ + YV M N+YA GRW +A LR +++ ++K P S + + KT F
Sbjct: 501 KIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFV 560
Query: 613 VED 615
D
Sbjct: 561 SGD 563
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 232/448 (51%), Gaps = 8/448 (1%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K S + W S IR D++ +AL F M+ + P++ FP + K+C + D
Sbjct: 63 KTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ + +HG IV+ D++ +++MY+K +D K+F+ MP +DV S+N +I G+A
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYA 182
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDAD 189
Q G E L + M ++ D T+ + I ++++ +L K +H + I G+D+D
Sbjct: 183 QSGMYEDALRMVREMGTSDLKPDAFTLSSVL--PIFSEYVDVLKGKEIHGYVIRKGIDSD 240
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + ++ + YAK ++ +E VF + R +SWNS++ G +++++L +R M
Sbjct: 241 VYIGSSLVDMYAKSARIEDSERVFSHLYR--RDSISWNSLVAGYVQNGRYNEALRLFRQM 298
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+ RP S++ +C L G+ +H + + GF ++ + + L+ MYSKCG+I
Sbjct: 299 VSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNI 358
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+AR +FD M VSWTA+I G+A G EA+ LF M+ G P+ V +++++ C
Sbjct: 359 QAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 418
Query: 370 GQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVS 427
G + E +F++ GL + A+ D+ + G + +A + + E T
Sbjct: 419 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSV 478
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELD 455
W+T+++ C+++ A + ++ +D
Sbjct: 479 WSTLLSSCSVHKNLELAEKVAEKIFTID 506
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/554 (35%), Positives = 300/554 (54%), Gaps = 32/554 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYA--KCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH I+K+ + F + +++ A L A LF+ + + WN MI G +
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ + M L G++ + T L ++ K +H + +G+++D
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168
Query: 192 VCNTWISAYAKCNDLKMAELVF----------------------------RGIEE-GLRT 222
V + I+ YA+ +L AELVF R EE +R
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VSWN++I G +F+++L F++ M P+ +T+V++LS+C +L G V S
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+G ++ ++N LI MYSKCGD+D AR LF+G+C++ +SW MI GY+ E
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK-DNVMVCNALI 401
AL LF M+ + P+ VT +S++ C GAL+LGKW Y L N + +LI
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLI 408
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY+KCG+I A+++F + K++ SW MI+G A++G AL+LF QM + P+ +
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TF+ VL AC+HAG +E G F+ M + Y ++P+L HY CM DLLGR G EA +++
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKN 528
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
M +K D IWG+LL AC++H N+E+GE+ A LFELEP + YV ++NIYA GRWD V
Sbjct: 529 MEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDV 588
Query: 582 ANLRTMMKRNQVKK 595
A +RT + +KK
Sbjct: 589 ARIRTKLNDKGMKK 602
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 229/454 (50%), Gaps = 40/454 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR + A+ + RM +EPN+ TFPF+ K+CAK+ + IHGH++
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVL 159
Query: 82 KSPFWSDIFVQTTMVDMYAKCDR-------------------------------LDCAYK 110
K SD FV T++++MYA+ LD A +
Sbjct: 160 KLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARR 219
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LF+++P RD SWNAMI G+AQ G E+ L F M+ + + T++ + A +
Sbjct: 220 LFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGS 279
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L V S+ G+ +++ + N I Y+KC DL A +F GI E + ++SWN +I
Sbjct: 280 LELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE--KDIISWNVMI 337
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
GG ++ + + ++L +R M P+ T VS+L +C AL G+ +H++
Sbjct: 338 GGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLG 397
Query: 291 L-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
L + S+ +LI MY+KCG+I++A+ +F GM ++ SW AMISG A G + AL LF
Sbjct: 398 LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQ 457
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCG 408
M G PD +T + ++S C +G +ELG+ F + + + +ID+ + G
Sbjct: 458 MRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAG 517
Query: 409 SIGDARELFYAL---PEKTVVSWTTMIAGCALNG 439
+A L + P+ + W +++ C ++G
Sbjct: 518 LFDEAEALMKNMEMKPDGAI--WGSLLGACRVHG 549
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 201/406 (49%), Gaps = 36/406 (8%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWIS--AYAKCNDLKMAELVFRGIEEGLRTVVSW 226
K LK +HS I G+ + I A + +L A L+F IE+ + + W
Sbjct: 43 KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFI--W 100
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N++I G + +++FY M+ G P+ T LL SC A +G+ +H H +
Sbjct: 101 NTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLK 160
Query: 287 YGFDLDVSVINTLISMYSKCGDI-------------------------------DSARFL 315
G + D V +LI+MY++ G++ D AR L
Sbjct: 161 LGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRL 220
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + R VSW AMI+GYAQ G +EAL F M+ A P+ T+++++S C QSG+L
Sbjct: 221 FEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSL 280
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
ELG W ++ GL N+ + NALIDMYSKCG + AR+LF + EK ++SW MI G
Sbjct: 281 ELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGY 340
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ + EAL LF +M + ++ PN VTF+++L AC + G L+ G + K +
Sbjct: 341 SHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN 400
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ ++ + D+ + G ++ A M KS G W ++ +H
Sbjct: 401 TSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS-LGSWNAMISGLAMH 445
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN I N +AL LFR+M+++++EPN++TF I ACA L + IH
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 79 HIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I K ++ + T+++DMYAKC ++ A ++F M + + SWNAMI G A G
Sbjct: 390 YIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHAN 449
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV----C 193
L LF MR G + D +T +G+ A HA + L + S + D D+S
Sbjct: 450 MALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE---DYDISPKLQHY 506
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
I + AE + + +E + W S++G C
Sbjct: 507 GCMIDLLGRAGLFDEAEALMKNMEMKPDGAI-WGSLLGAC 545
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA-----KLSD 69
+ ++ WN+ I A+ AL LFR+M+ EP+++TF + AC+ +L
Sbjct: 428 KPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGR 487
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMI 127
+S M+ + + SP + M+D+ + D A L M + D A W +++
Sbjct: 488 QCFSSMVEDYDI-SP---KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 301/574 (52%), Gaps = 8/574 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S+ + WN I H AL LF M + PN T + +C + FL +
Sbjct: 106 SADVVSWNVLICGYSQHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRS 165
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H +K+ D + + MYAKCD L+ + LF +M +++V SWN MI + Q GF
Sbjct: 166 VHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGF 225
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+K + F M G Q VT+M L A ++ ++VH + I G D SV +
Sbjct: 226 EDKAVLCFKEMLKEGWQPSPVTMMNLMSAN------AVPETVHCYIIKCGFTGDASVVTS 279
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAK MA+L++ + ++S II + + + ++ + + +
Sbjct: 280 LVCLYAKQGFTDMAKLLYECYPT--KDLISLTGIISSYSEKGEVESAVECFIQTLKLDIK 337
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD ++S+L P G H +G+ G D V N LIS YS+ +I +A L
Sbjct: 338 PDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSL 397
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F ++ ++W +MISG Q G +A+ LF M G+ PD +T+ S++SGC Q G L
Sbjct: 398 FFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYL 457
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+G+ Y +K ALIDMY+KCG + A ++FY++ + +V+W ++I+G
Sbjct: 458 RIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGY 517
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+L G +A F ++ E L P+++TFL VL ACTH G + G YF +M K Y + P
Sbjct: 518 SLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPT 577
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
L HY+C+ LLGR G KEA++ + +M I+ D+ +WG LL AC I + +++GE +A LF
Sbjct: 578 LQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSACWIQQEVKLGECLAKNLF 637
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
L + YV ++N+YA+ GRWD VA +R MM+
Sbjct: 638 LLNYKNGGFYVSLSNLYAIVGRWDDVARVRDMMR 671
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 239/456 (52%), Gaps = 17/456 (3%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL---------SDFLYSQMIHGHIVKS 83
++A ALL+FR++ ++ PN+LTF + KAC + +L I ++K
Sbjct: 13 HDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKR 72
Query: 84 PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF 143
++V T ++D Y K A +LF+ +P DV SWN +I G++Q G L LF
Sbjct: 73 GIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLF 132
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
+M + + T+ L + + +SVH+FGI G+ D + N S YAKC
Sbjct: 133 VHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKC 192
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
+DL+ ++L+F+ E G + V+SWN++IG D ++ ++ M+ +G++P T+++
Sbjct: 193 DDLEASQLLFQ--EMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMN 250
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
L+S+ PE VH + I GF D SV+ +L+ +Y+K G D A+ L++ +
Sbjct: 251 LMSANAVPET------VHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKD 304
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+S T +IS Y++KG+++ A+ F PD V ++S++ G +G F
Sbjct: 305 LISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHG 364
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
Y GL ++ +V N LI YS+ I A LF+ EK +++W +MI+GC G+ +
Sbjct: 365 YGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSD 424
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A++LF QM +P+ +T ++L C G+L G
Sbjct: 425 AMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIG 460
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 318/600 (53%), Gaps = 9/600 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I + A+ LF M + P+ +ACA+L D + +H
Sbjct: 113 SWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQA 172
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS + VQ +V MY+K + + LF+++ D+D+ SW ++I G AQ G L
Sbjct: 173 IKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDAL 232
Query: 141 CLFYNMRLVGI----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+F M G+ + F +V I++ L + +H + +D + +
Sbjct: 233 HIFREMIAEGMHHPNEFHFGSVFRACSVVINS--LEYGEQIHGLCVKYKLDRNSYAGCSL 290
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
YA+CN L A VF IE +VSWNS+I + +++ + M Y +P
Sbjct: 291 GDMYARCNKLDSAMKVFYRIES--PDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKP 348
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TV++LL +CV +AL QGR +HS+ + G DV V N+LISMY++C D SA +F
Sbjct: 349 DGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVF 408
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
DR V+W ++++ Q +++ +LF + ++ D +++ +++S + G E
Sbjct: 409 HETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFE 468
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGC 435
+ K YA GL + ++ NALID Y+KCGS+ DA +LF + + V SW+++I G
Sbjct: 469 MAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGY 528
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A G EALDLF +M L ++PN VTF+ VL AC+ G +++G Y+++M Y + P
Sbjct: 529 AQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPT 588
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
H SC+ DLL R G+L EA FV MP + D +W TLL A + H ++E+G+ A +
Sbjct: 589 KEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVL 648
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++P +A YV + NIYA G W+ A L+ M+ + V+K PG+S + + G+ F VED
Sbjct: 649 NIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVED 708
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 218/479 (45%), Gaps = 10/479 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT-----MVDMYAKCDRLDCAYKLFDKMPDR 118
C++L F +++H H++ S + + T ++ MY +C D A +FD M DR
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+ SW A+I AQ + LF +M +G D + +A L L + VH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ I + V N ++ Y+K + +F I + + + SW SII G +
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRD--KDLFSWGSIIAGLAQQGR 227
Query: 239 FDDSLNFYRHMIYDGF-RPDVTTVVSLLSSC-VCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D+L+ +R MI +G P+ S+ +C V +L G +H + Y D +
Sbjct: 228 EMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAG 287
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+L MY++C +DSA +F + VSW ++I+ ++ G L EA+ LF M +
Sbjct: 288 CSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLK 347
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
PD +TV++++ C AL G+ +Y GL +VMVCN+LI MY++C A ++
Sbjct: 348 PDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDV 407
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F+ ++ VV+W +++ C + + LF + +R++ VL A G+
Sbjct: 408 FHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYF 467
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
E KV V+ + + + D + G L +A + M D W +L+
Sbjct: 468 EMAKQVHAYAFKVGLVSDAILS-NALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLI 525
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 177/389 (45%), Gaps = 33/389 (8%)
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N I+ Y +C A +VF G+ + R VSW ++I + D++ + M+
Sbjct: 82 LSNHLITMYGRCAAPDSARMVFDGMLD--RNPVSWAAVIAAHAQNSRCADAMGLFSSMLR 139
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G PD + S + +C L GR VH+ I + V N L++MYSK G +
Sbjct: 140 LGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGD 199
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGCG 370
LF+ + D+ SW ++I+G AQ+G +AL +F M A G P+ S+ C
Sbjct: 200 GFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACS 259
Query: 371 QS-GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+LE G+ L N +L DMY++C + A ++FY + +VSW
Sbjct: 260 VVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWN 319
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK- 488
++I + +G EA+ LF +M L+P+ +T +A+L AC L +G + + K
Sbjct: 320 SLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKL 379
Query: 489 -----VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI-----KSDAGIWGTLLCAC 538
V N ++ Y+ LDF +M + D W ++L AC
Sbjct: 380 GLGGDVMVCNSLISMYT-------------RCLDFPSAMDVFHETNDRDVVTWNSILTAC 426
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
HR++E ++LF L HS+ P ++
Sbjct: 427 VQHRHMED----VFKLFRL-LHSSMPSLD 450
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 138/278 (49%), Gaps = 11/278 (3%)
Query: 268 CVCPEALVQGRLVHSH------GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
C + QGRLVH H G Y + + N LI+MY +C DSAR +FDGM D
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAY-LARNTILSNHLITMYGRCAAPDSARMVFDGMLD 108
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ +AQ +A+ LF +M G PD + S + C + G L LG+
Sbjct: 109 RNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQV 168
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
A +++V NAL+ MYSK GS+GD LF + +K + SW ++IAG A G
Sbjct: 169 HAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGRE 228
Query: 442 VEALDLFHQMMELDL-RPNRVTFLAVLQACTHA-GFLEKGWGYFNLMTKVYQVNPELNHY 499
++AL +F +M+ + PN F +V +AC+ LE G L K Y+++
Sbjct: 229 MDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVK-YKLDRNSYAG 287
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ D+ R KL A+ + D W +L+ A
Sbjct: 288 CSLGDMYARCNKLDSAMKVFYRIE-SPDLVSWNSLINA 324
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
S + WNS I +A++LF M+ + ++P+ +T + AC +
Sbjct: 311 ESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGR 370
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++VK D+ V +++ MY +C A +F + DRDV +WN+++ Q
Sbjct: 371 SIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHR 430
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+E V LF + D +++ + A+ + + K VH++ +G+ +D + N
Sbjct: 431 HMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSN 490
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I YAKC L A +F + G R V SW+S+I G ++L+ + M G
Sbjct: 491 ALIDTYAKCGSLDDANKLFEIMGTG-RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGV 549
Query: 255 RPDVTTVVSLLSSC 268
+P+ T V +L +C
Sbjct: 550 KPNHVTFVGVLIAC 563
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 318/600 (53%), Gaps = 3/600 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN + + E +A+ FR M K+ + ++LT+ I A L+ + I
Sbjct: 260 SDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI 319
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG +V+ + + V + ++MY K ++ A ++F +M + D+ SWN +I G A+ G
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHIGVDADVSVCNT 195
E L LF ++ G+ D T+ + +A + + + VH+ + G+ D V
Sbjct: 380 ECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTA 439
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I Y+K ++ AEL+F ++G + SWN+++ G T D + ++L + M G +
Sbjct: 440 LIDVYSKGGKMEEAELLFHN-QDGF-DLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D T + + C L QG+ +H+ I F D+ VI+ ++ MY KCG++ SAR +
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + V+WT +ISG + G+ ++AL + M AG PD T +++ C AL
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E GK + V +L+DMY+KCG+I DA LF + ++V W MI G
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL 677
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G EAL+ F++M + P+RVTF+ VL AC+H+G + F+ M K Y V PE
Sbjct: 678 AQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPE 737
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HYSC+ D L R G ++EA V SMP ++ A ++ TLL AC++ + E GE VA +LF
Sbjct: 738 IEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLF 797
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++P +A YV ++NIYA +W+ + R MMKR VKK PG S + + K F D
Sbjct: 798 TMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGD 857
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 210/441 (47%), Gaps = 9/441 (2%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A KLF D DV WN + + Q G + + F +M + D +T + +
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
HL L K +H + G D VSV N+ I+ Y K + A +F ++E ++SWN
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKE--VDLISWN 367
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC-PEALVQGRLVHSHGIH 286
++I GC + SL + ++ G PD T+ S+L +C E+ GR VH+ +
Sbjct: 368 TVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALK 427
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
G LD V LI +YSK G ++ A LF SW AM+ G+ + EALRL
Sbjct: 428 AGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRL 487
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
F M GE D +T + G L+ GK ++ V + ++DMY K
Sbjct: 488 FSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLK 547
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
CG + AR++F +P V+WTT+I+GC NGE +AL +HQM ++P+ TF +
Sbjct: 548 CGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATL 607
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPI 524
++AC+ LE+G + + ++N + + + + D+ + G +++A + M
Sbjct: 608 VKACSLLTALEQGK---QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNT 664
Query: 525 KSDAGIWGTLLCACKIHRNIE 545
+S A +W ++ H N E
Sbjct: 665 RSVA-LWNAMIVGLAQHGNAE 684
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 252/544 (46%), Gaps = 52/544 (9%)
Query: 28 EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS 87
E D + H+A +FR ++++ + T + K C S+ + G+ VK
Sbjct: 96 ELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQW 155
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D+FV +V++YAK R+ A LFD+MP RDV WN M+ + +MG ++VL LF
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFH 215
Query: 148 LVGIQADFVTV----MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
G++ D V+V MG+ + + + L +++ + D+DV+V N +S+Y +
Sbjct: 216 RSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQA 275
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
+ W ++ + +R MI D T +
Sbjct: 276 GE-------------------GWEAV--------------DCFRDMIKSRVPCDSLTYIV 302
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+LS L G+ +H + +G+D VSV N+ I+MY K G ++ AR +F M +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-SGALELGKWFD 382
+SW +ISG A+ G + +LRLF + +G +PD T+ S++ C + +G+
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A G+ + V ALID+YSK G + +A LF+ + SW M+ G ++ +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
EAL LF M E + +++TF +A L++G ++ K+ + + +L S +
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGI 541
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE-------YVAYRLF 555
D+ + G++K A +P D W T++ C +E GE Y RL
Sbjct: 542 LDMYLKCGEMKSARKVFNQIPSPDDVA-WTTVISGC-----VENGEEEQALFTYHQMRLA 595
Query: 556 ELEP 559
++P
Sbjct: 596 GVQP 599
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 192/437 (43%), Gaps = 41/437 (9%)
Query: 46 KKNDIEPNNLT---FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC 102
+K + P++L F + A A SD + + H IV S D +V ++ MYAKC
Sbjct: 3 RKCSVSPSSLLPQWFSILRHAIAD-SDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61
Query: 103 DRLDCAYKLFDKMP--DRDVASWNAMIVGFAQMGFL---EKVLCLFYNMRLVGIQADFVT 157
L A KLFD P DRD+ ++NA++ +A G L EK F+ RL+ T
Sbjct: 62 GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121
Query: 158 VMGLT---QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
L+ + + S +++ + + IG+ DV V ++ YAK ++ A ++F
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ +R VV WN ++ D+ L + G RPD +V ++L
Sbjct: 182 RMP--VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGV------ 233
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G F+ ++ + + C D D W +S Y
Sbjct: 234 ---------GKKTVFERELEQVRAYATKLFVCDD------------DSDVTVWNKTLSSY 272
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G+ EA+ F M + D +T + ++S LELGK G V
Sbjct: 273 LQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFV 332
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V N+ I+MY K GS+ AR +F + E ++SW T+I+GCA +G +L LF ++
Sbjct: 333 SVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRS 392
Query: 455 DLRPNRVTFLAVLQACT 471
L P++ T +VL+AC+
Sbjct: 393 GLLPDQFTITSVLRACS 409
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD--GMC 320
S+L + L+ G+ H+ + G + D V N LI+MY+KCG + SAR LFD
Sbjct: 18 SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77
Query: 321 DRTRVSWTAMISGYAQKGDLD------EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
DR V++ A+++ YA G+L EA +F + + + T+ + C G+
Sbjct: 78 DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGS 137
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ YA GL+ +V V AL+++Y+K I +AR LF +P + VV W M+
Sbjct: 138 PSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKA 197
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
G E L LF LRP+ V+ +L E+
Sbjct: 198 YVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFER 241
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 132/321 (41%), Gaps = 33/321 (10%)
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
AI L L K H+ + G++ D V N I+ YAKC L A +F + R +V
Sbjct: 23 AIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLV 82
Query: 225 SWNSIIGGCTYG------DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
++N+I+ + +K ++ + +R + T+ L C+ +
Sbjct: 83 TYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASE 142
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+ + + G DV V L+++Y+K I AR LFD M R V W M+ Y + G
Sbjct: 143 ALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMG 202
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
DE L LF A +G PD V+V +++ G G+ E + +
Sbjct: 203 AGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE--RELEQ--------------- 245
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+ Y A +LF + V W ++ GE EA+D F M++ +
Sbjct: 246 --VRAY--------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPC 295
Query: 459 NRVTFLAVLQACTHAGFLEKG 479
+ +T++ +L LE G
Sbjct: 296 DSLTYIVILSVVASLNHLELG 316
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/599 (32%), Positives = 310/599 (51%), Gaps = 3/599 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W I N +A LF M ++ + P+++T + + +H
Sbjct: 103 SVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVH 162
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
GH+VK + S + V +++D Y K L A LF M ++D ++NA++ G+++ GF
Sbjct: 163 GHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNH 222
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF+ M+ +G + T + A I + + VHSF + +V V N +
Sbjct: 223 DAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALL 282
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+K + + A +F + E +S+N +I C + + ++SL +R + + F
Sbjct: 283 DFYSKHDRIVEARKLFYEMPE--VDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRR 340
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+LLS L GR +HS I +V V N+L+ MY+KC A +F
Sbjct: 341 QFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFA 400
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ ++ V WTA+ISGY QKG ++ L+LF M A D T S++ C +L L
Sbjct: 401 DLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTL 460
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + G NV +AL+DMY+KCGSI +A ++F +P + VSW +I+ A
Sbjct: 461 GKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQ 520
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG+ AL F QM+ L+PN V+FL++L AC+H G +E+G YFN MT+VY++ P
Sbjct: 521 NGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRRE 580
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+ M D+L R G+ EA + MP + D +W ++L +C+IH+N E+ A +LF +
Sbjct: 581 HYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNM 640
Query: 558 EP-HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ AAPYV M+NIYA G WD V ++ ++ ++K P S V I KT F+ D
Sbjct: 641 KGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSAND 699
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 247/524 (47%), Gaps = 26/524 (4%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDF-----LYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
M K +PN F F + + D L+ +M H +++ + TM+ Y
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVIST---------NTMIMGY 83
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
K L A LFD M R V +W +I G+AQ + LF +M G+ D +T+
Sbjct: 84 LKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLA 143
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
L + ++ + VH + +G D+ + VCN+ + +Y K L +A +F+ + E
Sbjct: 144 TLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE- 202
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
+ V++N+++ G + D++N + M GFRP T ++L++ + + + G+
Sbjct: 203 -KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQ 261
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
VHS + F +V V N L+ YSK I AR LF M + +S+ +I+ A G
Sbjct: 262 VHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGR 321
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
++E+L LF ++ +++S S LE+G+ + A V+V N+
Sbjct: 322 VEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS 381
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+DMY+KC G+A +F L ++ V WT +I+G G + L LF +M + +
Sbjct: 382 LVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGAD 441
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALD 517
T+ ++L+AC + L G L +++ + N + S + D+ + G +KEAL
Sbjct: 442 SATYASILRACANLASLTLGK---QLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQ 498
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
Q MP+++ W L+ A +N + G A R FE HS
Sbjct: 499 MFQEMPVRNSVS-WNALISAYA--QNGDGGH--ALRSFEQMIHS 537
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 204/574 (35%), Positives = 316/574 (55%), Gaps = 11/574 (1%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSD--IFVQTTMVDMYAKCDRL 105
+D P+ L+F + C + + IH I+K+ D + + T + + A+ +
Sbjct: 16 HDFNPHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPI 72
Query: 106 DCAY--KLFDKMPDRDVASWNAMIVGFAQMGFLE-KVLCLFYNMRLVGIQADFVTVMGLT 162
D Y L ++ ++ +NA+I G A + L ++ M GI D T+ +
Sbjct: 73 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 132
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
+A ++ + + VH I +G+ +DV V NT + YA C+ ++ A VF + R
Sbjct: 133 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQ--RD 190
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
+VSW ++I G + + + M + + D T+V +LSSC L GR +H
Sbjct: 191 LVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHR 250
Query: 283 HGI-HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ I + +LDV V N L+ MY KCGD + AR +F M + VSW +MISG AQKG
Sbjct: 251 YIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFK 310
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
E+L +F M+ G PD VT++++++ C G LELGKW Y ++ + + NAL+
Sbjct: 311 ESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALV 370
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY+KCGSI A +F A+ K V S+T MI G A++G+ +ALDLF +M ++ + P+ V
Sbjct: 371 DMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEV 430
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TF+ VL AC+H G +E+G YF M+ +Y + P+L HY CM DLLGR G + EA +F+++
Sbjct: 431 TFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRN 490
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MPI+ DA + G LL ACKIH +E+GE V ++ ++EP YV M+NIY+ RW
Sbjct: 491 MPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDA 550
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
LR MK ++K PG S + ++G F D
Sbjct: 551 LKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGD 584
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 262/532 (49%), Gaps = 49/532 (9%)
Query: 1 MAASSLP--PR----LNKIYRSSTINQWNSQIRE-AVDKNEAHKALLLFRRMKKNDIEPN 53
+ A SLP PR L R+ + +N+ IR A N++ + L+++++M I P+
Sbjct: 65 LCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPD 124
Query: 54 NLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD 113
N T PF+ KACA+ + +HG +K SD++V T++ MYA CD + A K+FD
Sbjct: 125 NYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFD 184
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
P RD+ SW MI G+ +MGF + + LF+ M +QAD +T++ + + L L
Sbjct: 185 TSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRL 244
Query: 174 LKSVHSFGI-HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+ +H + I + V+ DV V N + Y KC D A VF+ E ++ VVSWNS+I G
Sbjct: 245 GRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQ--EMPVKNVVSWNSMISG 302
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
+F +SL +R M G +PD T+V++L+SC L G+ VH++ D
Sbjct: 303 LAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRAD 362
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ N L+ MY+KCG ID A ++F M + S+TAMI G A G +AL LF M
Sbjct: 363 GFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPK 422
Query: 353 AGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G PD VT + +++ C G +E G K+F++ + L+ + ++D+ + G I
Sbjct: 423 MGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLIN 482
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+A E +P + P+ A+L AC
Sbjct: 483 EAEEFIRNMP----------------------------------IEPDAFVLGALLGACK 508
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELN-HYSCMADLLGRKGKLKEALDFVQSM 522
G +E G ++M K+ ++ P + Y M+++ + ++AL ++M
Sbjct: 509 IHGKVELGE---SVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 557
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 211/637 (33%), Positives = 319/637 (50%), Gaps = 89/637 (13%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM- 115
F + C K ++++H I+K+ F S+IF+Q +VD+Y KC L+ A K+FD M
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 116 ------------------------------PDRDVASWNAMIVGFAQMGFLEKVLCLFYN 145
P+RD SWNAM+ GFAQ E+ L +
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 146 MRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
M DFV +A+ A LS+ +H DV + + + Y+
Sbjct: 142 MH----SEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A+ F ++ +R +VSWNS+I +L + M+ G PD T+
Sbjct: 198 KCRVVASAQRAFDDMD--VRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITL 255
Query: 262 VSLLSSCVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARFLFD--- 317
S+ S+C A+ +G +H+ + H + D+ + N L+ MY+KC ++ AR +FD
Sbjct: 256 ASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Query: 318 ----------------------------GMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
M +R VSW A+I+GY Q G+ +EA+RLF
Sbjct: 316 LRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLL 375
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGK-----------WFDNYACSGGLKDNVMVCN 398
++ P T ++++ C L+LG+ WF + G ++ V N
Sbjct: 376 LKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKS-----GEDSDIFVGN 430
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LIDMY KCG + D R +F + E+ VSW MI G A NG EAL++F +M+ RP
Sbjct: 431 SLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERP 490
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ VT + VL AC+HAG +E+G YF MT + + P +HY+CM DLLGR G L EA +
Sbjct: 491 DHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNL 550
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+Q+MP++ DA +WG+LL ACK+H NI +G+YVA RL E++P ++ PYV ++N+YA GRW
Sbjct: 551 IQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRW 610
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +R M++ V K PG S + I F V+D
Sbjct: 611 KDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKD 647
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 232/477 (48%), Gaps = 48/477 (10%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + ++ +AL M D N +F ACA L D IHG I
Sbjct: 119 WNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIA 178
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + D+++ + +VDMY+KC + A + FD M R++ SWN++I + Q G K L
Sbjct: 179 KSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALE 238
Query: 142 LFYNMRLVGIQADFVTVMGLTQA-----------AIHAKHLSLLKSVHSFGI-HIGVD-- 187
+F M GI+ D +T+ + A IHA+ + K + + + VD
Sbjct: 239 VFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMY 298
Query: 188 ------------------ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
DV + +S YAK + +K A L+F + E R VVSWN++
Sbjct: 299 AKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMME--RNVVSWNAL 356
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G T + ++++ + + + P T +LL++C L GR H+H + +GF
Sbjct: 357 IAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGF 416
Query: 290 ------DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
D D+ V N+LI MY KCG ++ R +F+ M +R VSW AMI GYAQ G EA
Sbjct: 417 WFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEA 476
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGL---KDNVMVCNA 399
L +F M +GE PD VT++ ++S C +G +E G+ +F + GL KD+
Sbjct: 477 LEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY---TC 533
Query: 400 LIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
++D+ + G + +A L +P E V W +++A C ++G + +++E+D
Sbjct: 534 MVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEID 590
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 170/402 (42%), Gaps = 75/402 (18%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS I A KAL +F RM IEP+ +T +A ACA LS IH
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH 275
Query: 78 GHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-------------------- 116
++K + +D+ + +VDMYAKC R++ A +FD+MP
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSV 335
Query: 117 -----------DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAA 165
+R+V SWNA+I G+ Q G E+ + LF ++ I T L A
Sbjct: 336 KAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNAC 395
Query: 166 IHAKHLSLLKSVHS------FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
+ L L + H+ F G D+D+ V N+ I Y KC ++ LVF + E
Sbjct: 396 ANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLE- 454
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR- 278
R VSWN++I G ++L +R M+ G RPD T++ +LS+C + +GR
Sbjct: 455 -RDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRC 513
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
S I +G V V + +T M+ + G
Sbjct: 514 YFQSMTIEHGL---VPV----------------------------KDHYTCMVDLLGRAG 542
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
LDEA L M PD V S+++ C G + LGK+
Sbjct: 543 CLDEANNLIQTMPME---PDAVVWGSLLAACKVHGNITLGKY 581
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 136/300 (45%), Gaps = 31/300 (10%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + LL +CV +++ + RLVH+ I F ++ + N L+ +Y KCG ++ AR +F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 317 DGM-----------------------------C--DRTRVSWTAMISGYAQKGDLDEALR 345
D M C +R + SW AM+SG+AQ+ +EALR
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
M + V + + S +S C L +G +V + +AL+DMYS
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KC + A+ F + + +VSW ++I NG +AL++F +MM + P+ +T +
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
V AC + +G + K + +L + + D+ + ++ EA MP++
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/598 (31%), Positives = 314/598 (52%), Gaps = 2/598 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WNS I + +A +F+RM++ + +TF I AC + + +
Sbjct: 225 SVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVR 284
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I ++ F D+FV T ++ MYA+C + A ++F +M ++ +W+A+I FA G
Sbjct: 285 ESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCG 344
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F M+ GI + VT + L L L +H G+D ++ N +
Sbjct: 345 EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALV 404
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y +C A VF +E L ++SWNS+IG ++ DD+L +R M G +PD
Sbjct: 405 NVYGRCESPDDARTVFDQLE--LPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPD 462
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+++L +C +LVH G V +L++MY+K G++D A +
Sbjct: 463 RVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQ 522
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M ++ +W +I+GYA G EAL + ++ D VT +S+++ C S +L
Sbjct: 523 EMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAE 582
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + A GL +V+V NAL +MYSKCGS+ +AR +F ++P ++ VSW M+ A
Sbjct: 583 GKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQ 642
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+GE E L L +M + ++ N +TF++VL +C+HAG + +G YF+ + + +
Sbjct: 643 HGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTE 702
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY C+ DLLGR GKL+EA ++ MP++ W +LL AC++ ++++ G+ A +L EL
Sbjct: 703 HYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLEL 762
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+P +++ V ++NIY+ G W A LR M +VKK PG S + + K F V D
Sbjct: 763 DPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRD 820
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/571 (27%), Positives = 266/571 (46%), Gaps = 32/571 (5%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R+ + WN I +AL LF M + PN +T + +C +
Sbjct: 19 RARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGI 78
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++H ++ F+ + V T +++MY KC L A +F++M +++V +WNAM+ ++ G
Sbjct: 79 LVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQG 138
Query: 135 FLEKVLC-LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
K+ LF M L G++A+ +T + + + + L K +HS DV V
Sbjct: 139 CCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVN 198
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ Y KC L A VF G+ R+V +WNS+I + ++ ++ ++ M +G
Sbjct: 199 TALVNTYTKCGSLTDARKVFDGMP--CRSVGTWNSMISAYSISERSGEAFFIFQRMQQEG 256
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
R D T +S+L +CV PE L G+ V F+LD+ V LI+MY++C + A
Sbjct: 257 ERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAA 316
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F M ++W+A+I+ +A G EALR F M+ G +P+ VT +S+++G
Sbjct: 317 QVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPS 376
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
LE GL D + NAL+++Y +C S DAR +F L ++SW +MI
Sbjct: 377 GLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIG 436
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEKGWGY 482
+AL LF M + ++P+RV F+ +L ACT H E G G
Sbjct: 437 IYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGG 496
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH- 541
L+ + + ++ + G+L A +Q M + W L+ +H
Sbjct: 497 SPLVQ------------TSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLINGYALHG 543
Query: 542 RNIEIGEYVAYRLFELE--PHSAAPYVEMAN 570
R+ E E AY+ +LE P ++ + N
Sbjct: 544 RSREALE--AYQKLQLEAIPVDKVTFISVLN 572
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 245/515 (47%), Gaps = 18/515 (3%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
A+ LF RM ++ N +TF + + + IH + +S D+FV T +V+
Sbjct: 144 AVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVN 203
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
Y KC L A K+FD MP R V +WN+MI ++ + +F M+ G + D VT
Sbjct: 204 TYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVT 263
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + A ++ + L K V + D+ V I+ YA+C + A VF ++
Sbjct: 264 FLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK 323
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ +++W++II ++L ++R M +G P+ T +SLL+ P L +
Sbjct: 324 Q--TNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL 381
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H +G D ++ N L+++Y +C D AR +FD + +SW +MI Y Q
Sbjct: 382 SRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQC 441
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
D+AL+LF M+ G PD V ++++ C K GL + +V
Sbjct: 442 ERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQ 501
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+L++MY+K G + A + + E+ + +W +I G AL+G EAL+ + Q ++L+
Sbjct: 502 TSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAY-QKLQLEAI 560
Query: 458 P-NRVTFLAVLQACTHAGFLEKGWGYFN------LMTKVYQVNPELNHYSCMADLLGRKG 510
P ++VTF++VL ACT + L +G + L + V N N YS + G
Sbjct: 561 PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYS-------KCG 613
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ A SMPI+S A W +L A H E
Sbjct: 614 SMENARRIFDSMPIRS-AVSWNGMLQAYAQHGESE 647
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 200/386 (51%), Gaps = 11/386 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY++C L A F K+ R+V SWN MI ++ ++ L LF+ M L G+ + +T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ + + + L VH+ + G + V ++ Y KC L A+ VF +
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 218 EGLRTVVSWNSIIG-----GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
E + VV+WN+++G GC + ++ + M+ +G + +V T +++L+S V P+
Sbjct: 121 E--KNVVTWNAMLGVYSLQGCCW----KLAVELFTRMLLEGVKANVITFLNVLNSVVDPD 174
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL +G+ +HS LDV V L++ Y+KCG + AR +FDGM R+ +W +MIS
Sbjct: 175 ALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMIS 234
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y+ EA +F M+ GE D VT LS++ C L+ GK +
Sbjct: 235 AYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
++ V ALI MY++C S DA ++F + + +++W+ +I A +G EAL F M
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEK 478
+ + PNRVTF+++L T LE+
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEE 380
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 209/601 (34%), Positives = 319/601 (53%), Gaps = 14/601 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + A K + LF M+ P+ T+ I ACA L + +H I+
Sbjct: 418 WNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII 477
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F ++FV+ T+VDMYAKC L+ A + F+ + +RD SWNA+IVG+ Q ++
Sbjct: 478 KHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFN 537
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M L GI D V++ + + + L + VH F + G+ + ++ I Y
Sbjct: 538 MFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYV 597
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A VF + R+VVS N+II G D ++++ ++ M +G P T
Sbjct: 598 KCGAIEAARYVFSCMPS--RSVVSMNAIIAGYAQND-LVEAIDLFQEMQNEGLNPSEITF 654
Query: 262 VSLLSSCVCPEALVQGRLVH----SHGIHYGFD-LDVSVINTLISMYSKCGDIDSARFLF 316
SLL +C P L GR +H G+ Y D L VS L+ MY A LF
Sbjct: 655 ASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVS----LLVMYMNSQRKTDADILF 710
Query: 317 -DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ ++ + WTA+ISG+ Q G +EAL+L+ M PD T S++ C +L
Sbjct: 711 SEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASL 770
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAG 434
G+ + GL + + +A++DMY+KCG + + ++F + K V+SW +MI G
Sbjct: 771 GDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVG 830
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A NG AL +F +M +RP+ VTFL VL AC+HAG + +G F++M Y++ P
Sbjct: 831 FAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVP 890
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
L+H +CM DLLGR G LKEA +F+ + + +A IW TLL AC+IH + G A +L
Sbjct: 891 RLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKL 950
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
ELEP +++PYV ++NIYA G WD V ++R M+ ++K PG S + + KT F
Sbjct: 951 IELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAG 1010
Query: 615 D 615
D
Sbjct: 1011 D 1011
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 271/523 (51%), Gaps = 8/523 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
++ + WN I V + +A+ F+ M K ++ T + A A L Y +
Sbjct: 311 NTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLL 370
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H +K S+++V +++++MYAKC++++ A K+FD + +R++ WNAM+ G+AQ G+
Sbjct: 371 VHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGY 430
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
KV+ LF MR G D T + A + L + + +HSF I + ++ V NT
Sbjct: 431 ASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENT 490
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC L+ A F I R VSWN+II G + D++ N +R MI DG
Sbjct: 491 LVDMYAKCGALEEARQQFEFIRN--RDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIA 548
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD ++ S+LS C +AL QG VH + G + ++LI MY KCG I++AR++
Sbjct: 549 PDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYV 608
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F M R+ VS A+I+GYAQ DL EA+ LF M+ G P +T S++ C L
Sbjct: 609 FSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKL 667
Query: 376 ELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKTVVSWTTMI 432
LG+ G L D + +L+ MY DA LF + P+ T++ WT +I
Sbjct: 668 NLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTIL-WTAII 726
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G NG EAL L+ +M + RP++ TF +VL+AC+ L G +L+ V
Sbjct: 727 SGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLD 786
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ EL S + D+ + G +K ++ + M K+D W +++
Sbjct: 787 SDELTG-SAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 233/450 (51%), Gaps = 38/450 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V +AL +F M+K + P+ + F + AC L
Sbjct: 251 WTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLG------------- 297
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
RLD A LF +MP+ +V +WN MI G + G + +
Sbjct: 298 ----------------------RLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAID 335
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F NM G+++ T+ + A + L+ VH+ I G++++V V ++ I+ YA
Sbjct: 336 FFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYA 395
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A+ VF ++E R +V WN+++GG + + M GF PD T
Sbjct: 396 KCEKMEAAKKVFDALDE--RNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTY 453
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C C E L GR +HS I + F+ ++ V NTL+ MY+KCG ++ AR F+ + +
Sbjct: 454 TSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRN 513
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I GY Q+ D DEA +F M G PD V++ S++SGC ALE G+
Sbjct: 514 RDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQV 573
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ GL+ + ++LIDMY KCG+I AR +F +P ++VVS +IAG A N +
Sbjct: 574 HCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DL 632
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACT 471
VEA+DLF +M L P+ +TF ++L ACT
Sbjct: 633 VEAIDLFQEMQNEGLNPSEITFASLLDACT 662
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 152/609 (24%), Positives = 268/609 (44%), Gaps = 65/609 (10%)
Query: 13 IYRSSTIN---QWN-SQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
++RS++++ Q N S I+ V++ HK ++ + + PF
Sbjct: 36 LHRSNSLSFHHQSNFSTIQRQVNQTSEHKIFTHLLKICLQQCQRIKIRHPFDETPQRLAQ 95
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
S+ IH +K F S + + +VD+YAKC ++ A K F+++ RD+ +WN+++
Sbjct: 96 ASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLS 155
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+++ G LE+V+ F +++ G+ + T + + + L K VH I +G +
Sbjct: 156 MYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEF 215
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + I Y+KC L A +F + + VSW ++I G +++L +
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDP--DTVSWTAMIAGYVQVGLPEEALKVFED 273
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G PD V+++++CV G
Sbjct: 274 MQKLGLVPDQVAFVTVITACV-----------------------------------GLGR 298
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+D A LF M + V+W MISG+ ++G EA+ F M G T+ S++S
Sbjct: 299 LDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA 358
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
AL G A GL NV V ++LI+MY+KC + A+++F AL E+ +V W
Sbjct: 359 IASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLW 418
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
M+ G A NG + + LF +M P+ T+ ++L AC LE G L +
Sbjct: 419 NAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGR---QLHSF 475
Query: 489 VYQVNPELNHY--SCMADLLGRKGKLKEA---LDFVQSMPIKSDAGIWGTLLCACKIHRN 543
+ + N E N + + + D+ + G L+EA +F+++ D W ++ +
Sbjct: 476 IIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRN----RDNVSWNAIIVG-YVQEE 530
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
E + +R L+ A V +A+I + G ANL+ + + QV F LV
Sbjct: 531 DEDEAFNMFRRMILDG-IAPDEVSLASILS------GCANLQALEQGEQVHCF----LVK 579
Query: 604 INGKTCTFT 612
+TC +
Sbjct: 580 SGLQTCLYA 588
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 306/586 (52%), Gaps = 7/586 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMI---- 76
WN+ I+ VD + +AL + M + + + T+P + KACA L +M+
Sbjct: 109 WNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENV 168
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
+V+ +FVQ +VDM+AKC L A +F+ M +RD+A+W AMI G G
Sbjct: 169 EADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDW 228
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ LF MR G AD V + + A AK L +H + GV D V N
Sbjct: 229 LDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNAL 288
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y KC L MA+ VF I G + VVSW+++I G + K S+N + M+ G +P
Sbjct: 289 VDMYCKCGCLGMADRVFWSI--GFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKP 346
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T+ S+L S + G+ +H + GFD + + I YS+ G I A +
Sbjct: 347 NSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVL 406
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ M R V W +M++GYA G+ D AL F A++ G PD VTV+S++ C L
Sbjct: 407 ELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLI 466
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK Y + V NALIDMY KC + +E+F + ++ ++ T+I+
Sbjct: 467 QGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFG 526
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G EA+ LF M + P++VTF+A+L +C+HAG +EKG ++++M + Y ++P
Sbjct: 527 KHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGK 586
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HYSC+ DL R GKL +A FV S+ +++ + G LL AC++H ++I E VA R+FE
Sbjct: 587 EHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFE 646
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
P ++ ++NIYA G W V +RTM++ +K G SL+
Sbjct: 647 QNPSDPGYHILLSNIYANAGMWSHVTRIRTMIENRSLKNKTGNSLI 692
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 188/390 (48%), Gaps = 7/390 (1%)
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQA 153
+V YA+ A + D MP R+ +WNA I G G + L ++ M R + A
Sbjct: 81 LVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAA 140
Query: 154 DFVTVMGLTQA----AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
D T + +A + + + ++V + + V V V + +AKC L A
Sbjct: 141 DGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEA 200
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
VF + E R + +W ++IGG + + D+++ + M +GF D + +++ +C
Sbjct: 201 RSVFESMLE--RDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACG 258
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
+ L G ++H + G D V N L+ MY KCG + A +F + + VSW+
Sbjct: 259 RAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWST 318
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+I+GY+Q G ++ LF M AG P+ T+ S++ + GK ++ G
Sbjct: 319 LIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNG 378
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ + +A ID YS+ GSI +A + +P++ +V W +M+AG A+NG AL F
Sbjct: 379 FDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFR 438
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ ++ RP+ VT ++VL C H L +G
Sbjct: 439 ALQKVGFRPDHVTVVSVLPVCNHHSRLIQG 468
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 7/216 (3%)
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
CP L + R +H+ + G +V+ L+ Y++ G+ A + DGM R +W
Sbjct: 52 CP-TLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWN 110
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKW----FDN 383
A I G G EAL ++AM G V D T +I C G +E G+ +
Sbjct: 111 AAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEA 170
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
G + +V V AL+DM++KCG +G+AR +F ++ E+ + +WT MI G G++++
Sbjct: 171 DVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLD 230
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A+ LF +M + V V+ AC A L G
Sbjct: 231 AMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTG 266
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/588 (34%), Positives = 309/588 (52%), Gaps = 37/588 (6%)
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY--KLFDKMPDR--DV 120
AK D + IH I+KS + +F Q+ +++ A D +Y LF + + ++
Sbjct: 33 AKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNI 92
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
WN +I + L LF M G+ + T L ++ +K K +H+
Sbjct: 93 FIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAH 152
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG----------------IEEG----- 219
+ + + V + I Y++ +L+ A LVF + EG
Sbjct: 153 ALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDA 212
Query: 220 --------LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
+ VVSWN++I G +F+++L + M P+ +T+VS+LS+C
Sbjct: 213 RRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHL 272
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+L G+ + S GF ++ ++N L+ MYSKCG+I +AR LFDGM D+ + W MI
Sbjct: 273 RSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMI 332
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG--- 388
GY +EAL LF M P+ VT L+++ C GAL+LGKW Y
Sbjct: 333 GGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKG 392
Query: 389 -GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G +NV + ++I MY+KCG + A ++F ++ +++ SW MI+G A+NG AL L
Sbjct: 393 TGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGL 452
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F +M+ +P+ +TF+ VL ACT AGF+E G YF+ M K Y ++P+L HY CM DLL
Sbjct: 453 FEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLA 512
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
R GK EA + +M ++ D IWG+LL AC+IH +E GEYVA RLFELEP ++ YV
Sbjct: 513 RSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVL 572
Query: 568 MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++NIYA GRWD VA +RT + +KK PG + + I+G F V D
Sbjct: 573 LSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGD 620
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 228/466 (48%), Gaps = 43/466 (9%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
++ I WN+ IR +L LF +M + + PN+ TFP + K+CAK +
Sbjct: 87 HQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEA 146
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRL---------------------------- 105
+ +H H +K V T+++ MY++ L
Sbjct: 147 KQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSE 206
Query: 106 ---DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D A +LFD++P +DV SWNAMI G+ Q G E+ L F M+ + + T++ +
Sbjct: 207 GHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVL 266
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
A H + L L K + S+ G ++ + N + Y+KC ++ A +F G+E+ +
Sbjct: 267 SACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMED--KD 324
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+ WN++IGG + ++++L + M+ + P+ T +++L +C AL G+ VH+
Sbjct: 325 VILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHA 384
Query: 283 H------GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
+ G G +VS+ ++I MY+KCG ++ A +F M R+ SW AMISG A
Sbjct: 385 YIDKNLKGT--GNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAM 442
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVM 395
G + AL LF M G PD +T + ++S C Q+G +ELG ++F + G+ +
Sbjct: 443 NGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQ 502
Query: 396 VCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGE 440
+ID+ ++ G +A+ L + E W +++ C ++G+
Sbjct: 503 HYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQ 548
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 306/581 (52%), Gaps = 6/581 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W +R E+ + + L+ + K+ +++ F KAC +L D + IH +V
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K P + ++ V T ++DMYAKC + A+K+F+ + R+V W +MI G+ + E+ L
Sbjct: 170 KVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF MR + + T L A L K H + G++ + + + Y
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+ A VF E +V W ++I G T+ +++L+ ++ M +P+ T+
Sbjct: 289 KCGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS C E L GR VH I G D +V N L+ MY+KC A+++F+ +
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W ++ISG++Q G + EAL LF M + P+ VTV S+ S C G+L +G
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 382 DNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
Y+ G +V V AL+D Y+KCG AR +F + EK ++W+ MI G G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ + +L+LF +M++ +PN TF ++L AC H G + +G YF+ M K Y P HY
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY 585
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM D+L R G+L++ALD ++ MPI+ D +G L C +H ++GE V ++ +L P
Sbjct: 586 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHP 645
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
A+ YV ++N+YA GRW+ +R +MK+ + K G S
Sbjct: 646 DDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 197/403 (48%), Gaps = 4/403 (0%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG + + DI + T +V +Y A +FD++P+ D W M+ +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+V+ L+ + G + D + +A + L K +H + + D V
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGL 182
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC ++K A VF I LR VV W S+I G D ++ L + M +
Sbjct: 183 LDMYAKCGEIKSAHKVFNDIT--LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG 240
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T +L+ +C AL QG+ H + G +L ++ +L+ MY KCGDI +AR +F
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ V WTAMI GY G ++EAL LF M+ P+ VT+ S++SGCG LE
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLE 360
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG+ + G+ D V NAL+ MY+KC DA+ +F EK +V+W ++I+G +
Sbjct: 361 LGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 419
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG EAL LFH+M + PN VT ++ AC G L G
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 146/316 (46%), Gaps = 3/316 (0%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
L+ H G+ D+S+ +S Y K A LVF I E W ++
Sbjct: 60 LRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE--PDFYLWKVMLRCY 117
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+ + + Y ++ GFR D L +C + L G+ +H + D
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDN 176
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V+ L+ MY+KCG+I SA +F+ + R V WT+MI+GY + +E L LF M
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
+ + T ++I C + AL GKWF G++ + + +L+DMY KCG I +A
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
R +F +V WT MI G NG EAL LF +M ++++PN VT +VL C
Sbjct: 297 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 474 GFLEKGWGYFNLMTKV 489
LE G L KV
Sbjct: 357 ENLELGRSVHGLSIKV 372
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 135/322 (41%), Gaps = 41/322 (12%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARFLFDGMCD 321
LLS C ++L Q SHG+ G L D+S+ L+S+Y G AR +FD + +
Sbjct: 50 LLSKCTNIDSLRQ-----SHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE 104
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
W M+ Y + E ++L+ + G D + + C + L+ GK
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
DNV V L+DMY+KCG I A ++F + + VV WT+MIAG N
Sbjct: 165 HCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------------- 488
E L LF++M E ++ N T+ ++ ACT L +G + + K
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 489 ------------VYQVNPELNH-----YSCMADLLGRKGKLKEALDFVQSMP---IKSDA 528
+V E +H ++ M G + EAL Q M IK +
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 529 GIWGTLLCACKIHRNIEIGEYV 550
++L C + N+E+G V
Sbjct: 344 VTIASVLSGCGLIENLELGRSV 365
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 328/600 (54%), Gaps = 12/600 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ--MIHGH 79
WN + L F + + +PN + + +A +L +YSQ HG+
Sbjct: 116 WNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELK--IYSQGFAFHGY 173
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFLEK 138
I +S F + + VQ +++ +YA+ + A+KLF +M R DV SW+ MI GF Q+G E+
Sbjct: 174 IFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQ 232
Query: 139 VLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+F NM GI D VTV+ + +A + K +SL VH I G++ D+ V N+ I
Sbjct: 233 GFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLI 292
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC ++ A F+ I E + ++SWN ++ + ++L M+ +G D
Sbjct: 293 DMYSKCFNVHSAFKAFKEIPE--KNIISWNLMLSAYILNESHLEALALLGTMVREGAEKD 350
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ ++L ++ R VH I G++ + ++N++I Y+KC ++ AR +FD
Sbjct: 351 EVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFD 410
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
GM + V+W+ MI+G+A+ G DEA+ +F M +P+ V++++++ C S L
Sbjct: 411 GMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQ 469
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
KW A GL V + ++IDMYSKCG I + F +P+K VV W+ MI+ +
Sbjct: 470 SKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRI 529
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG EAL LF ++ + +PN VT L++L AC+H G +E+G +F M + + + P L
Sbjct: 530 NGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLE 589
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAG--IWGTLLCACKIHRNIEIGEYVAYRLF 555
HYSC+ D+L R GK EAL+ ++ +P + +AG IWGTLL +C+ + NI +G A R+
Sbjct: 590 HYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVL 649
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+LEP S+A Y+ +N+YA G A +R + K VK G SLVHIN +T F D
Sbjct: 650 QLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAGD 709
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 262/531 (49%), Gaps = 30/531 (5%)
Query: 24 SQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
S+I++A +AL L+ ++ + + + P I KAC+ S F +HG ++K
Sbjct: 17 SKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTS-FNLGTAMHGCLIK 75
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
S + + +D Y K LD A + FD ++D SWN M+ G G + LC
Sbjct: 76 QGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCW 135
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F R Q + +++ + QA K S + H + G A +SV N+ +S YA+
Sbjct: 136 FIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAE 195
Query: 203 CNDLKMAELVFRGIEEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GFRPDVTT 260
+ + A +F E +R VVSW+ +IGG + + +R+M+ + G PD T
Sbjct: 196 VH-MYFAHKLFG--EMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVT 252
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VVS+L +C + + G +VH I G + D+ V N+LI MYSKC ++ SA F +
Sbjct: 253 VVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP 312
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ +SW M+S Y EAL L M G D VT+ + L++ K
Sbjct: 313 EKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTL---------ANVLQIAKH 363
Query: 381 F-DNYACSG--------GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
F D+ C G + N ++ N++ID Y+KC + AR +F + +K VV+W+TM
Sbjct: 364 FLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTM 423
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVY 490
IAG A NG+ EA+ +F QM E ++ PN V+ + +++AC + L + W + + +
Sbjct: 424 IAGFARNGKPDEAISVFKQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRR-- 480
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ E++ + + D+ + G ++ ++ +P K + W ++ A +I+
Sbjct: 481 GLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQK-NVVCWSAMISAFRIN 530
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 157/333 (47%), Gaps = 17/333 (5%)
Query: 18 TINQWNSQIREAVDKNEAH-KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
I WN + A NE+H +AL L M + E + +T + + D L + +
Sbjct: 315 NIISWNLML-SAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSV 373
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG I++ + S+ + +++D YAKC+ ++ A +FD M +DV +W+ MI GFA+ G
Sbjct: 374 HGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKP 433
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ + +F M I + V++M L +A + L K H + G+ ++V + +
Sbjct: 434 DEAISVFKQMNEEVIPNN-VSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSI 492
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I Y+KC D++ + F I + + VV W+++I ++L + + +G +P
Sbjct: 493 IDMYSKCGDIEASIRAFNQIPQ--KNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKP 550
Query: 257 DVTTVVSLLSSCVCPEALVQG-----RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+ T +SLLS+C + +G +V HGI G + + ++ M S+ G +
Sbjct: 551 NAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEH----YSCIVDMLSRAGKFNE 606
Query: 312 ARFLFDGMCDRTRVS---WTAMISGYAQKGDLD 341
A L + + W ++S G++
Sbjct: 607 ALELIEKLPKEMEAGASIWGTLLSSCRSYGNIS 639
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR-PDVTTVVSLLSSCVCP 271
F + GLR + S I +Y + ++L Y + G + D + S+L +C
Sbjct: 3 FSNFQAGLR-LSDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKAC-SN 60
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+ G +H I G S+ N+ I Y K GD+DSA+ FD ++ VSW M+
Sbjct: 61 TSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMV 120
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
G G + L F A P++ ++L +I + G F Y G
Sbjct: 121 HGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFS 180
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQ 450
+ V N+L+ +Y++ + A +LF + + VVSW+ MI G GE + +F
Sbjct: 181 AILSVQNSLLSLYAEV-HMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRN 239
Query: 451 MM-ELDLRPNRVTFLAVLQACTH 472
M+ E + P+ VT ++VL+ACT+
Sbjct: 240 MVTEAGIPPDGVTVVSVLKACTN 262
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/590 (32%), Positives = 322/590 (54%), Gaps = 5/590 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + A +F++M+++ I+P ++T + +KL L + I+
Sbjct: 118 WTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCL---II 174
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F SD+ + +MV+MY KC R+ A +LF+ + RD+ SWN+++ ++++G E++L
Sbjct: 175 LHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQ 234
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M++ I+ D T A+ L L K VH + G++ D V + + Y
Sbjct: 235 LLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYL 294
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L A VF+ E + VV W ++I G D D +L + MI +P T+
Sbjct: 295 RCRCLDPAYKVFKSTTE--KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATL 352
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L++C G +H + + G LD+ N+L++MY+KC + + +F+ M +
Sbjct: 353 ASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVE 412
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A+++G+A+ G L + + F M + PD +TV S++ CG +GAL GKW
Sbjct: 413 KDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWI 472
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N+ L +M AL+DMY KCG++ +A++ F + ++ +V+W+T+I G NG+
Sbjct: 473 HNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKG 532
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL + + + + PN V F++VL AC+H G + KG + MTK ++++P L H +C
Sbjct: 533 EIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRAC 592
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R GK+ EA F + M + + G LL AC+++ +E+G+ +A +FEL+P
Sbjct: 593 VVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVD 652
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+V++AN YA RWDGV T M+ +KK+PG S + ++G T TF
Sbjct: 653 PGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTF 702
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 265/541 (48%), Gaps = 9/541 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS + + H+ L + M+K + + TFP + KAC L+ F + +H +V
Sbjct: 17 FNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVV 76
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D ++ ++++ YAK + K+FD M R+V W +I +++ G ++
Sbjct: 77 VNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFS 136
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR GIQ VT++ L L LL +H I G ++D+++ N+ ++ Y
Sbjct: 137 MFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYG 193
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F I G R +VSWNS++ + ++ L + M + +PD T
Sbjct: 194 KCGRIADARRLFESI--GCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S LS+ L G+LVH + G ++D V + L+ +Y +C +D A +F +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V WTAMISG Q D+AL +F+ M + P T+ S ++ C Q G ++G
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y G+ ++ N+L+ MY+KC + + +F + EK +VSW ++AG A NG
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+ + F++M + LRP+ +T ++LQAC AG L +G N + + + P + +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI-PCIMTETA 490
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG--EYVAYRLFELEP 559
+ D+ + G L+ A M ++ D W TL+ + EI +Y + +EP
Sbjct: 491 LVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEP 549
Query: 560 H 560
+
Sbjct: 550 N 550
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 204/438 (46%), Gaps = 4/438 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS + + L L + MK DI+P+ TF A A D +++HG
Sbjct: 213 IVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHG 272
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K D V++ +V +Y +C LD AYK+F ++DV W AMI G Q +K
Sbjct: 273 LMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADK 332
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L +FY M ++ T+ A + S+H + + G+ D+ N+ ++
Sbjct: 333 ALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVT 392
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKCN L+ + +F + E + +VSWN+I+ G + F+ M RPD
Sbjct: 393 MYAKCNKLQQSCSIFNKMVE--KDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDS 450
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TV SLL +C AL QG+ +H+ + + L+ MY KCG++++A+ FD
Sbjct: 451 ITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDC 510
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R V+W+ +I GY G + ALR + G P+ V +S++S C G + G
Sbjct: 511 MLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKG 570
Query: 379 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCA 436
+++ + N+ ++D+ S+ G + +A + + E ++V ++ C
Sbjct: 571 LSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACR 630
Query: 437 LNGEFVEALDLFHQMMEL 454
+NG + M EL
Sbjct: 631 VNGRVELGKVIARDMFEL 648
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 180/358 (50%), Gaps = 5/358 (1%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
S+N+++ + G +VL + +M+ Q D T L +A + S S+H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+ G+ D + ++ IS YAK + + VF + + R VV W +IIG + D
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLK--RNVVPWTTIIGSYSREGDIDI 133
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ + ++ M G +P T++SLL L +H I +GF+ D+++ N++++
Sbjct: 134 AFSMFKQMRESGIQPTSVTLLSLLPGI---SKLPLLLCLHCLIILHGFESDLALSNSMVN 190
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY KCG I AR LF+ + R VSW +++S Y++ G +E L+L AM+ PD T
Sbjct: 191 MYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQT 250
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S +S G L LGK GL + V +AL+ +Y +C + A ++F +
Sbjct: 251 FCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTT 310
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EK VV WT MI+G N +AL +F+QM+E +++P+ T + L AC G + G
Sbjct: 311 EKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIG 368
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 5/281 (1%)
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
M+ L+ I G S+NS++ +Y L Y M + D T SL +
Sbjct: 1 MSGLIHESIAHGCTK--SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKA 58
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C G +H + G D + ++LIS Y+K G I R +FD M R V W
Sbjct: 59 CTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPW 118
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
T +I Y+++GD+D A +F M +G P VT+LS++ G + L L
Sbjct: 119 TTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIIL 175
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G + ++ + N++++MY KCG I DAR LF ++ + +VSW ++++ + G E L L
Sbjct: 176 HGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQL 235
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
M D++P++ TF + L A G L G LM K
Sbjct: 236 LQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLK 276
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/608 (32%), Positives = 329/608 (54%), Gaps = 10/608 (1%)
Query: 16 SSTINQWNS--QIREAVDKNEAHKALLLFRRMKKN---DIEPNNLTFPFIAKACAKLSDF 70
SST Q++S +I++ + +AL +R + D + + +AC + D
Sbjct: 62 SSTNRQFSSLHEIKKLCESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDI 121
Query: 71 LYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ +H + S F +D + T ++ MY+ C + +FDK+ +++ WNA++
Sbjct: 122 EVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSA 181
Query: 130 FAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ + E + +F + + + D T+ + +A L L + +H + + +
Sbjct: 182 YTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVS 241
Query: 189 DVSVCNTWISAYAKCNDLKMA-ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
DV V N I+ Y KC ++ A + VF ++ +TV SWN+++ G +L+ Y
Sbjct: 242 DVFVGNALIAMYGKCGLVEEAVKRVFDLMDT--KTVSSWNALLCGYAQNSDPRKALDLYL 299
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G PD T+ SLL +C ++L G +H + G +D + +L+S+Y CG
Sbjct: 300 QMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCG 359
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+A+ LFDGM R+ VSW MI+GY+Q G DEA+ LF M + G P + ++ +
Sbjct: 360 KPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCG 419
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C Q AL LGK +A L +++ V +++IDMY+K G IG ++ +F L EK V S
Sbjct: 420 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 479
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W +IAG ++G EAL+LF +M+ L L+P+ TF +L AC+HAG +E G YFN M
Sbjct: 480 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 539
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
++ + P+L HY+C+ D+LGR G++ +AL ++ MP D+ IW +LL +C+IH N+ +G
Sbjct: 540 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 599
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E VA +L ELEP YV ++N++A G+WD V +R MK ++K G S + + GK
Sbjct: 600 EKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGK 659
Query: 608 TCTFTVED 615
F + D
Sbjct: 660 VHNFLIGD 667
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 182/392 (46%), Gaps = 22/392 (5%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ + + T++ WN+ + ++ KAL L+ +M + ++P+ T + AC+++
Sbjct: 265 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 324
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
Y + IHG +++ D F+ +++ +Y C + A LFD M R + SWN MI
Sbjct: 325 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 384
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G++Q G ++ + LF M GIQ + +M + A L L K +H F + +
Sbjct: 385 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 444
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
D+ V ++ I YAK + +++ +F + E + V SWN II G + ++L +
Sbjct: 445 DIFVSSSIIDMYAKGGCIGLSQRIFDRLRE--KDVASWNVIIAGYGIHGRGKEALELFEK 502
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGIHYGFDLDVSVINTLISMY 303
M+ G +PD T +L +C + G ++++ H I + V++ M
Sbjct: 503 MLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVD----ML 558
Query: 304 SKCGDIDSARFLFDGMC-DRTRVSWTAMISGYAQKGDLDEALRLFFA-MEAAGEVPD-LV 360
+ G ID A L + M D W++++S G+L ++ +E E P+ V
Sbjct: 559 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 618
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
+ ++ +G GKW D G +KD
Sbjct: 619 LISNLFAGS--------GKWDDVRRVRGRMKD 642
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L R+ R + WN I +AL LF +M + ++P++ TF I AC+
Sbjct: 464 LSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS 523
Query: 66 K---LSDFL--YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRD 119
+ D L ++QM++ H ++ T +VDM + R+D A +L ++MP D D
Sbjct: 524 HAGLVEDGLEYFNQMLNLHNIEPKLEH----YTCVVDMLGRAGRIDDALRLIEEMPGDPD 579
Query: 120 VASWNAMIVG---FAQMGFLEKV 139
W++++ +G EKV
Sbjct: 580 SRIWSSLLSSCRIHGNLGLGEKV 602
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 296/544 (54%), Gaps = 12/544 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H V S F +D FV + + +Y R + A K+FD +P D WN ++ G +
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEA 204
Query: 136 LEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
LE F M G ++ D T+ + AA + ++ + VH+FG G+ V
Sbjct: 205 LEA----FVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT 260
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
IS YAKC D++ A +F +E +V++N++I G + S+ ++ ++ G
Sbjct: 261 GLISLYAKCGDMECARHLFDRMEG--PDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318
Query: 255 RPDVTTVVSLLS--SCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
RP +T+V+L+ S E L +H+H + G D + V L ++Y + D+DSA
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAG--CLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSA 376
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R FD M ++T SW AMISGYAQ G + A+ LF M+A P+ +T+ S +S C Q
Sbjct: 377 RRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQL 436
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GAL LGKW + L+ NV V ALIDMY KCGSI +AR +F ++ K VVSW MI
Sbjct: 437 GALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMI 496
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G L+G+ EAL L+ MM+ L P TFL+VL AC+H G +++G F MT Y +
Sbjct: 497 SGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGI 556
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS-DAGIWGTLLCACKIHRNIEIGEYVA 551
P + H +CM DLLGR G+LKEA + + P + GIWG LL AC +H++ ++ + +
Sbjct: 557 TPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLAS 616
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+LFELEP + YV ++N+Y ++ A +R K ++ K PG +L+ I + F
Sbjct: 617 QKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVF 676
Query: 612 TVED 615
D
Sbjct: 677 MAGD 680
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 194/403 (48%), Gaps = 6/403 (1%)
Query: 37 KALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+AL F RM + P++ T + A A++++ + +H K V T +
Sbjct: 203 EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGL 262
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+ +YAKC ++CA LFD+M D+ ++NA+I G++ G + + LF + +G++
Sbjct: 263 ISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSS 322
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
T++ L H L +H+ + G+DA+ V + Y + ND+ A F
Sbjct: 323 STLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDA 382
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ E +T+ SWN++I G + ++ ++ M RP+ T+ S LS+C AL
Sbjct: 383 MPE--KTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALS 440
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G+ VH + +L+V V+ LI MY KCG I AR +FD M ++ VSW MISGY
Sbjct: 441 LGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYG 500
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNV 394
G EAL+L+ M A P T LS++ C G ++ G F + G+ +
Sbjct: 501 LHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGI 560
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVS--WTTMIAGC 435
C ++D+ + G + +A EL P+ V W ++ C
Sbjct: 561 EHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGAC 603
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 261 VVSLLSSC----VCPEALVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
SL SSC + P + R +H+ + GF D V + L +Y + AR
Sbjct: 120 ATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARK 179
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSG 373
+FD + V W +++G + EAL F M AG V PD T+ S++ +
Sbjct: 180 VFDAVPSPDTVLWNTLLAGLSG----SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVA 235
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+G+ + GL + V LI +Y+KCG + AR LF + +V++ +I+
Sbjct: 236 NTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALIS 295
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAV-----------LQACTHAGFLEKG 479
G ++NG +++LF +++ + LRP+ T +A+ L C HA ++ G
Sbjct: 296 GYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG 352
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I A+ LF++M+ ++ PN LT ACA+L + +H
Sbjct: 387 TMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVH 446
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I +++V T ++DMY KC + A +FD M +++V SWN MI G+ G
Sbjct: 447 KIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGA 506
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSVHS-FGIHIGVDADVSV 192
+ L L+ +M + T + + A H + ++ +S+ S +GI G++
Sbjct: 507 EALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEH---- 562
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS---WNSIIGGC 233
C + + LK A F I E ++ V W +++G C
Sbjct: 563 CTCMVDLLGRAGQLKEA---FELISEFPKSAVGPGIWGALLGAC 603
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/640 (31%), Positives = 315/640 (49%), Gaps = 72/640 (11%)
Query: 9 RLNKIYRSSTINQWNSQIREAVD-KNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
R+ R+ WN+ +R + +N H+ALL ++ + +P++ T+P + + CA
Sbjct: 59 RIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAAR 118
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +H H V S F D++V+ T++++YA C + A ++F++ P D+ SWN ++
Sbjct: 119 VSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLL 178
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ Q G +E+ +F M +
Sbjct: 179 AGYVQAGEVEEAERVFEGMP---------------------------------------E 199
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+ N+ I+ + + ++ A +F G+ R +VSW++++ + +++L +
Sbjct: 200 RNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFV 259
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G D VVS LS+C + GR VH + G + VS+ N LI +YS CG
Sbjct: 260 EMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCG 319
Query: 308 DIDSARFLFD--------------------------------GMCDRTRVSWTAMISGYA 335
+I AR +FD M ++ VSW+AMISGYA
Sbjct: 320 EIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYA 379
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q EAL LF M+ G PD ++S IS C L+LGKW Y L+ NV+
Sbjct: 380 QHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVI 439
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ LIDMY KCG + +A E+FYA+ EK V +W +I G A+NG ++L++F M +
Sbjct: 440 LSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTG 499
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
PN +TF+ VL AC H G + G YFN M +++ + HY CM DLLGR G LKEA
Sbjct: 500 TVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEA 559
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
+ + SMP+ D WG LL AC+ HR+ E+GE + +L +L+P +V ++NIYA
Sbjct: 560 EELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASK 619
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
G W V +R +M ++ V K PG S++ NG F D
Sbjct: 620 GNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGD 659
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 128/303 (42%), Gaps = 23/303 (7%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF--- 314
V+T+ SLL SC CP Q + S I G D + LI+ S + +
Sbjct: 3 VSTLDSLLQSCKCPRHFKQ---LLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLR 59
Query: 315 LFDGMCDRTRVSWTAMISG--YAQKGDLDEAL--RLFFAMEAAGEVPDLVTVLSMISGCG 370
+F+ + + +W ++ Y Q L +LF A A PD T ++ C
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAK---PDSYTYPILLQCCA 116
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ G+ +A S G +V V N L+++Y+ CGS+G AR +F P +VSW T
Sbjct: 117 ARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNT 176
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
++AG GE EA +F M E N + +++ G +EK FN V
Sbjct: 177 LLAGYVQAGEVEEAERVFEGMPE----RNTIASNSMIALFGRKGCVEKARRIFN---GVR 229
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHRNIEIG 547
++ +S M + +EAL M + D + + L AC N+E+G
Sbjct: 230 GRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMG 289
Query: 548 EYV 550
+V
Sbjct: 290 RWV 292
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 201/596 (33%), Positives = 314/596 (52%), Gaps = 7/596 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
WN+ I +AL FR M K I+P+ +T + CA+ D + ++++H
Sbjct: 205 SWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHC 264
Query: 79 HIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ +K + V +VD+Y KC + K+FD++ +R+V SWNA+I F+ G
Sbjct: 265 YALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYM 324
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L +F M G++ + VT+ + L VH F + + +++DV + N+ I
Sbjct: 325 DALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLI 384
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAK ++A +F + G+R +VSWN++I +++ R M G P+
Sbjct: 385 DMYAKSGSSRIASTIFNKM--GVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPN 442
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L +C L G+ +H+ I G LD+ V N L MYSKCG ++ A+ +F+
Sbjct: 443 NVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN 502
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R VS+ +I GY++ D E+LRLF M G PD+V+ + ++S C +
Sbjct: 503 -ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQ 561
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK ++ V N+L+D+Y++CG I A ++FY + K V SW TMI G +
Sbjct: 562 GKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGM 621
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
GE A++LF M E + + V+F+AVL AC+H G +EKG YF +M + + P
Sbjct: 622 RGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDL-NIEPTHT 680
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+CM DLLGR G ++EA D ++ + I D IWG LL AC+IH NIE+G + A LFEL
Sbjct: 681 HYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFEL 740
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+P Y+ ++N+YA RWD +R +MK KK PG S V + F V
Sbjct: 741 KPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFLV 796
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 220/472 (46%), Gaps = 16/472 (3%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I+ S +N+ S I + KN + F + PN L + ++
Sbjct: 2 IFHSHVVNKLPS-ITTPLTKNTHFSSF--FSTSLQTSNPPNLLQLCTLCDTLSQTKQVHA 58
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP--DRDVASWNAMIVGF 130
++HG + +S + + +++ YA + LF R WN +I
Sbjct: 59 YSLLHGFLPRS-----VSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRAN 113
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ G + + M G++ D T + + + + VH +G D DV
Sbjct: 114 SIAGVFDG-FGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDV 172
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V NT ++ Y C A VF + E R VSWN++IG C+ ++++L F+R M+
Sbjct: 173 FVGNTLLAFYGNCGLFGDAMKVFDEMPE--RDKVSWNTVIGLCSLHGFYEEALGFFRVMV 230
Query: 251 --YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCG 307
G +PD+ TVVS+L C E V R+VH + + G V V N L+ +Y KCG
Sbjct: 231 AAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCG 290
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+++ +FD + +R +SW A+I+ ++ +G +AL +F M G P+ VT+ SM+
Sbjct: 291 SEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLP 350
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
G+ G +LG ++ ++ +V + N+LIDMY+K GS A +F + + +VS
Sbjct: 351 VLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVS 410
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
W MIA A N EA++L QM PN VTF VL AC GFL G
Sbjct: 411 WNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVG 462
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 164/367 (44%), Gaps = 45/367 (12%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN+ I ++A+ L R+M+ PNN+TF + ACA+L + IH
Sbjct: 407 NIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIH 466
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I++ D+FV + DMY+KC L+ A +F+ + RD S+N +I+G+++
Sbjct: 467 ARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSL 525
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF MRL+G++ D V+ MG+ A + + K +H + + V N+ +
Sbjct: 526 ESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLL 585
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y +C + +A VF I+ + V SWN++I G + D ++N + M DG D
Sbjct: 586 DLYTRCGRIDLATKVFYCIQN--KDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYD 643
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ V++LS+C SHG G I+ R F
Sbjct: 644 SVSFVAVLSAC-------------SHG----------------------GLIEKGRKYFK 668
Query: 318 GMCD----RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
MCD T + M+ + G ++EA L + +PD +++ C G
Sbjct: 669 MMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSI---IPDTNIWGALLGACRIHG 725
Query: 374 ALELGKW 380
+ELG W
Sbjct: 726 NIELGLW 732
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 203/597 (34%), Positives = 317/597 (53%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + V A++ + LF MK P++ T+ I ACA L +H I+
Sbjct: 396 WNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVII 455
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F S++FV +VDMYAK L+ A + F+ + +RD SWN +IVG+ Q +
Sbjct: 456 KNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFH 515
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M L+GI D V++ + A + L K VH + G + + ++ I YA
Sbjct: 516 LFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYA 575
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A + + E R+VVS N++I G + + ++N +R M+ +G T
Sbjct: 576 KCGAIDSAHKILACMPE--RSVVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITF 632
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFDGMC 320
SLL +C + L GR +HS + G LD + +L+ MY A LF
Sbjct: 633 ASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFS 692
Query: 321 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ ++ V WTAMISG +Q AL+L+ M + +PD T +S + C +++ G
Sbjct: 693 NPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGT 752
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+ G + + +AL+DMY+KCG + + ++F + +K V+SW +MI G A N
Sbjct: 753 ETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKN 812
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +AL +F +M + + P+ VTFL VL AC+H+G + +G F++M +Y + P +H
Sbjct: 813 GYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADH 872
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+CM DLLGR G LKEA +F+ + + DA +W T+L AC+IH + G+ A +L ELE
Sbjct: 873 CACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELE 932
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P +++PYV ++NIYA G WD V LR M+ VKK PG S + + +T F D
Sbjct: 933 PQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGD 989
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 258/516 (50%), Gaps = 6/516 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I +A+ F+ M+K I+ T + A A L+ + ++H +
Sbjct: 295 WNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEAL 354
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S+++V +++V MYAKC +++ A K+FD + +++V WNAM+ G+ Q G+ +V+
Sbjct: 355 KQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVME 414
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+NM+ G D T + A K+L L +HS I +++ V N + YA
Sbjct: 415 LFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYA 474
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L+ A F I R VSWN II G + ++ + +R M G PD ++
Sbjct: 475 KSGALEDARQQFELIRN--RDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSL 532
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C L QG+ VH + G + + ++LI MY+KCG IDSA + M +
Sbjct: 533 ASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPE 592
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R+ VS A+I+GYAQ +L++A+ LF M G +T S++ C + L LG+
Sbjct: 593 RSVVSMNALIAGYAQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQI 651
Query: 382 DNYACSGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNG 439
+ GL+ D+ + +L+ MY DA LF K+ V WT MI+G + N
Sbjct: 652 HSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQND 711
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
V AL L+ +M ++ P++ TF++ L+AC ++ G +L+ + EL
Sbjct: 712 CSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTS- 770
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
S + D+ + G +K ++ + M K D W +++
Sbjct: 771 SALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMI 806
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 245/518 (47%), Gaps = 38/518 (7%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R K I WNS + + H + F + + + PN TF + +CA+L
Sbjct: 115 RAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLE 174
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ +H ++VK F S + + ++ MYAKC+ L A +FD + D SW +MI
Sbjct: 175 MVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIG 234
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+ ++G E+ + +F M VG + D V +
Sbjct: 235 GYIKVGLPEEAVKVFQEMEKVGQEPDQVAFV----------------------------- 265
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
T I+AY L A +F + R VV+WN +I G G +++ F+++
Sbjct: 266 ------TVINAYVDLGRLDNASDLFSRMPN--RNVVAWNLMISGHAKGGYGVEAIEFFQN 317
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G + +T+ S+LS+ AL G LVH+ + G +V V ++L+SMY+KCG
Sbjct: 318 MRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGK 377
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+++A+ +FD + ++ V W AM+ GY Q G +E + LFF M++ G PD T S++S
Sbjct: 378 MEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSA 437
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C L+LG + N+ V NAL+DMY+K G++ DAR+ F + + VSW
Sbjct: 438 CACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSW 497
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+I G + VEA LF +M L + P+ V+ ++L AC LE+G L K
Sbjct: 498 NVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVK 557
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
Q +L S + D+ + G + A + MP +S
Sbjct: 558 TGQ-ETKLYSGSSLIDMYAKCGAIDSAHKILACMPERS 594
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 234/469 (49%), Gaps = 40/469 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I + +A+ +F+ M+K EP+ + F
Sbjct: 229 WTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAF------------------------ 264
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
T+++ Y RLD A LF +MP+R+V +WN MI G A+ G+ + +
Sbjct: 265 -----------VTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIE 313
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F NMR GI++ T+ + A L VH+ + G+ ++V V ++ +S YA
Sbjct: 314 FFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYA 373
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A+ VF + E + VV WN+++GG ++ + + +M GF PD T
Sbjct: 374 KCGKMEAAKKVFDTLNE--QNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTY 431
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C C + L G +HS I F ++ V N L+ MY+K G ++ AR F+ + +
Sbjct: 432 SSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRN 491
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW +I GY Q+ D EA LF M G +PD V++ S++S C LE GK
Sbjct: 492 RDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQV 551
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA-LNGE 440
+ G + + ++LIDMY+KCG+I A ++ +PE++VVS +IAG A +N E
Sbjct: 552 HCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE 611
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+A++LF M+ + +TF ++L AC L G +L+ K+
Sbjct: 612 --QAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKM 658
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 210/452 (46%), Gaps = 41/452 (9%)
Query: 66 KLSDF-LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
+LS F +++IH +K FWS + +VD+YAKC +D A + F ++ D+D+ +WN
Sbjct: 70 RLSQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWN 129
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
+++ ++ GF V+ F + G+ + T + + + + + VH + +
Sbjct: 130 SILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKM 189
Query: 185 GVDADVSVCN-TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G ++ +S C I YAKCN L A +F G E + VSW S+IGG ++++
Sbjct: 190 GFES-ISYCEGALIGMYAKCNFLTDARSIFDGAVELDK--VSWTSMIGGYIKVGLPEEAV 246
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
++ M G PD V T+I+ Y
Sbjct: 247 KVFQEMEKVGQEPDQVAFV-----------------------------------TVINAY 271
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
G +D+A LF M +R V+W MISG+A+ G EA+ F M AG T+
Sbjct: 272 VDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLG 331
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
S++S AL+ G A GL NV V ++L+ MY+KCG + A+++F L E+
Sbjct: 332 SVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQ 391
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
VV W M+ G NG E ++LF M P+ T+ ++L AC +L+ G
Sbjct: 392 NVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLH 451
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+++ K + L + + D+ + G L++A
Sbjct: 452 SVIIK-NKFASNLFVGNALVDMYAKSGALEDA 482
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/590 (32%), Positives = 321/590 (54%), Gaps = 5/590 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + A +F++M+++ I+P ++T + +KL L + I+
Sbjct: 118 WTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCL---II 174
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F SD+ + +MV+MY KC R+ A +LF + RD+ SWN+++ ++++G E++L
Sbjct: 175 LHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQ 234
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M++ I+ D T A+ L L K VH + G++ D V + + Y
Sbjct: 235 LLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYL 294
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L A VF+ E + VV W ++I G D D +L + MI +P T+
Sbjct: 295 RCRCLDPAYKVFKSTTE--KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATL 352
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L++C G +H + + G LD+ N+L++MY+KC + + +F+ M +
Sbjct: 353 ASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVE 412
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW A+++G+A+ G L + + F M + PD +TV S++ CG +GAL GKW
Sbjct: 413 KDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWI 472
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N+ L +M AL+DMY KCG++ +A++ F + ++ +V+W+T+I G NG+
Sbjct: 473 HNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKG 532
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL + + + + PN V F++VL AC+H G + KG + MTK ++++P L H +C
Sbjct: 533 EIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRAC 592
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R GK+ EA F + M + + G LL AC+++ +E+G+ +A +FEL+P
Sbjct: 593 VVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVD 652
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+V++AN YA RWDGV T M+ +KK+PG S + ++G T TF
Sbjct: 653 PGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTF 702
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 266/541 (49%), Gaps = 9/541 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS + + H+ L + M+K + + TFP + KAC L+ F + +H +V
Sbjct: 17 FNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVV 76
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D ++ ++++ YAK + K+FD M R+V W +I +++ G ++
Sbjct: 77 VNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFS 136
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR GIQ VT++ L L LL +H I G ++D+++ N+ ++ Y
Sbjct: 137 MFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYG 193
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F+ I+ R +VSWNS++ + ++ L + M + +PD T
Sbjct: 194 KCGRIADARRLFQSID--CRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S LS+ L G+LVH + G ++D V + L+ +Y +C +D A +F +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V WTAMISG Q D+AL +F+ M + P T+ S ++ C Q G ++G
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y G+ ++ N+L+ MY+KC + + +F + EK +VSW ++AG A NG
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+ + F++M + LRP+ +T ++LQAC AG L +G N + + + P + +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI-PCIMTETA 490
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG--EYVAYRLFELEP 559
+ D+ + G L+ A M ++ D W TL+ + EI +Y + +EP
Sbjct: 491 LVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEP 549
Query: 560 H 560
+
Sbjct: 550 N 550
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 204/438 (46%), Gaps = 4/438 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS + + L L + MK DI+P+ TF A A D +++HG
Sbjct: 213 IVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHG 272
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K D V++ +V +Y +C LD AYK+F ++DV W AMI G Q +K
Sbjct: 273 LMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADK 332
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L +FY M ++ T+ A + S+H + + G+ D+ N+ ++
Sbjct: 333 ALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVT 392
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKCN L+ + +F + E + +VSWN+I+ G + F+ M RPD
Sbjct: 393 MYAKCNKLQQSCSIFNKMVE--KDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDS 450
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TV SLL +C AL QG+ +H+ + + L+ MY KCG++++A+ FD
Sbjct: 451 ITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDC 510
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R V+W+ +I GY G + ALR + G P+ V +S++S C G + G
Sbjct: 511 MLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKG 570
Query: 379 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCA 436
+++ + N+ ++D+ S+ G + +A + + E ++V ++ C
Sbjct: 571 LSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACR 630
Query: 437 LNGEFVEALDLFHQMMEL 454
+NG + M EL
Sbjct: 631 VNGRVELGKVIARDMFEL 648
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 179/358 (50%), Gaps = 5/358 (1%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
S+N+++ + G +VL + +M+ Q D T L +A + S S+H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+ G+ D + ++ IS YAK + + VF + + R VV W +IIG + D
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLK--RNVVPWTTIIGSYSREGDIDI 133
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ + ++ M G +P T++SLL L +H I +GF+ D+++ N++++
Sbjct: 134 AFSMFKQMRESGIQPTSVTLLSLLPGI---SKLPLLLCLHCLIILHGFESDLALSNSMVN 190
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY KCG I AR LF + R VSW +++S Y++ G +E L+L AM+ PD T
Sbjct: 191 MYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQT 250
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S +S G L LGK GL + V +AL+ +Y +C + A ++F +
Sbjct: 251 FCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTT 310
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EK VV WT MI+G N +AL +F+QM+E +++P+ T + L AC G + G
Sbjct: 311 EKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIG 368
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
S+NS++ +Y L Y M + D T SL +C G +H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ G D + ++LIS Y+K G I R +FD M R V WT +I Y+++GD+D A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
+F M +G P VT+LS++ G + L L G + ++ + N++++MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
KCG I DAR LF ++ + +VSW ++++ + G E L L M D++P++ TF
Sbjct: 193 GKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 465 AVLQACTHAGFLEKGWGYFNLMTK 488
+ L A G L G LM K
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLK 276
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F+ + + S+ +++S + +G + L+ + +M+ D T S+ C
Sbjct: 4 FIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLN 63
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
G GL + + ++LI Y+K G I R++F + ++ VV WTT+I
Sbjct: 64 LFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIG 123
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
+ G+ A +F QM E ++P VT L++L + L + + ++
Sbjct: 124 SYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLC----LHCLIILHGFE 179
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA-CKIHRNIEIGEYV-A 551
+L + M ++ G+ G++ +A QS+ + D W +LL A KI EI + + A
Sbjct: 180 SDLALSNSMVNMYGKCGRIADARRLFQSIDCR-DIVSWNSLLSAYSKIGATEEILQLLQA 238
Query: 552 YRLFELEP 559
++ +++P
Sbjct: 239 MKIEDIKP 246
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 188/572 (32%), Positives = 313/572 (54%), Gaps = 9/572 (1%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCAY 109
P+ TFP + K CA+L + H ++ +D++ +++ YA+ +D A
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHA 168
++FD MP RDV +WN+M+ G+ G L F M + +Q D V ++ A
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L + VH++ I G++ DV V + + Y KC D+ AE VF + RTVV+WN
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPS--RTVVTWNC 282
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+IGG ++ +++ + + M +G + +V T ++LL++C E+ + GR VH +
Sbjct: 283 MIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQ 342
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
F V + L+ MYSK G + S+ +F M +T VSW MI+ Y K EA+ LF
Sbjct: 343 FLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFL 402
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
+ PD T+ +++ G L + +Y G +N ++ NA++ MY++CG
Sbjct: 403 DLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCG 462
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ +RE+F + K V+SW TMI G A++G+ AL++F +M LRPN TF++VL
Sbjct: 463 DVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLT 522
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC+ +G ++GW FN M + Y + P++ HY CM DLLGR G LKE + F+++MPI
Sbjct: 523 ACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTF 582
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEP-----HSAAPYVEMANIYALGGRWDGVAN 583
+WG+LL A + +I+I EY A R+F+LE + YV ++++YA GRW V
Sbjct: 583 RVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVER 642
Query: 584 LRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++++M+ +++ +S+V ++G +C+F D
Sbjct: 643 IKSLMEEKGLRRTDPRSIVELHGISCSFVNGD 674
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 217/452 (48%), Gaps = 10/452 (2%)
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
++V +A R+D A + RD N +I G A G L + M G +
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISAYAKCNDLKMAELV 212
D T + + L ++ HS I +GV ADV N+ ++ YA+ + AE V
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF--RPDVTTVVSLLSSCVC 270
F G+ R VV+WNS++ G +L +R M ++ + D +++ L++C
Sbjct: 167 FDGMPA--RDVVTWNSMVDGYVSNGLGTLALVCFREM-HEALEVQHDGVGIIAALAACCL 223
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
AL+QGR VH++ I +G + DV V +++ MY KCGDI SA +F M RT V+W M
Sbjct: 224 ESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCM 283
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
I GYA +EA F M+A G ++VT +++++ C Q+ + G+ Y
Sbjct: 284 IGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQF 343
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+V++ AL++MYSK G + + ++F + KT+VSW MIA ++EA+ LF
Sbjct: 344 LPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLD 403
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRK 509
++ L P+ T AV+ A G L + + + ++ Y N + + + + R
Sbjct: 404 LLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLI--MNAIMHMYARC 461
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
G + + + M K D W T++ IH
Sbjct: 462 GDVLSSREIFDKMAAK-DVISWNTMIMGYAIH 492
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 152/330 (46%), Gaps = 4/330 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S T+ WN I +A F +MK + +T + ACA+ LY +
Sbjct: 274 SRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRS 333
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+HG+I + F + ++T +++MY+K ++ + K+F +M + + SWN MI +
Sbjct: 334 VHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEM 393
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + LF ++ + D+ T+ + A + L + +HS+ I +G + + N
Sbjct: 394 YMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNA 453
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YA+C D+ + +F + + V+SWN++I G + +L + M +G R
Sbjct: 454 IMHMYARCGDVLSSREIFDKM--AAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLR 511
Query: 256 PDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-R 313
P+ +T VS+L++C +G +S YG + + + + GD+ +
Sbjct: 512 PNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQ 571
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
F+ + D T W ++++ + D+D A
Sbjct: 572 FIENMPIDPTFRVWGSLLTASRNRNDIDIA 601
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 203/593 (34%), Positives = 307/593 (51%), Gaps = 46/593 (7%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK--LFDKMPD 117
+ K C ++ + IH + + S+ V ++ K + D Y +FD MP
Sbjct: 25 LIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPG 81
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
+ WN MI G++++G + ++ M G+ D T L + + + +
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H + +G ++V V N I Y+ ++ +A VF +G VV+WN +I G
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKG--DVVTWNVMISGYNRSK 199
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI- 296
+FD+S+ + M P T+VS+LS+C + L G+ VH Y DL + +
Sbjct: 200 QFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH----RYVKDLKIEPVR 255
Query: 297 ---NTLISMYSKCGDIDSA-------------------------------RFLFDGMCDR 322
N LI MY+ CGD+D+A R FD M +R
Sbjct: 256 VLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPER 315
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSWTAMI GY Q E L LF M+AA PD T++S+++ C GALELG+W
Sbjct: 316 DFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIK 375
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
Y +K + V NALIDMY CG++ A +F A+P + +SWT +I G A+NG
Sbjct: 376 AYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGE 435
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
EALD+F QM++ + P+ VT + VL ACTH+G ++KG +F MT + + P + HY CM
Sbjct: 436 EALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCM 495
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
DLLGR G LKEA + +++MP+K ++ +WG+LL AC++HR+ E+ E A ++ ELEP +
Sbjct: 496 VDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENG 555
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A YV + NIYA RW+ + +R +M +KK PG SL+ +NG F D
Sbjct: 556 AVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGD 608
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 223/467 (47%), Gaps = 35/467 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I+ + A+ ++ M + + P+ T+PF+ K + + + +H HIV
Sbjct: 87 WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIV 146
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S++FVQ ++ +Y+ + A +FD+ DV +WN MI G+ + ++ +
Sbjct: 147 KLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMK 206
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M + + +T++ + A K L++ K VH + + ++ + N I YA
Sbjct: 207 LFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYA 266
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT----------YGDK------------- 238
C D+ A +F ++ R V+SW +I+ G T Y DK
Sbjct: 267 ACGDMDTALGIFDNMKS--RDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMI 324
Query: 239 --------FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
F + L+ +R M +PD T+VS+L++C AL G + ++
Sbjct: 325 DGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIK 384
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+D V N LI MY CG+++ A +F+ M R ++SWTA+I G A G +EAL +F M
Sbjct: 385 IDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQM 444
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
A PD VT + ++ C SG ++ G K+F G++ NV ++D+ + G
Sbjct: 445 LKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGH 504
Query: 410 IGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +A E+ +P K + W +++ C ++ + A Q++EL+
Sbjct: 505 LKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELE 551
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK--CGDIDSARFLF 316
T +SL+ +C +++ Q + +HS I G + V +I+ K GD++ AR +F
Sbjct: 20 TPPLSLIKTC---KSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVF 76
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M W MI GY++ G + A+ ++ M G +PD T ++ + A++
Sbjct: 77 DTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVK 136
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ ++ G NV V NALI +YS G + AR +F + VV+W MI+G
Sbjct: 137 CGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYN 196
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ +F E++ LF +M + + P+ +T ++VL AC+ L G + K ++ P
Sbjct: 197 RSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVG-KRVHRYVKDLKIEPVR 255
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSM 522
+ + D+ G + AL +M
Sbjct: 256 VLENALIDMYAACGDMDTALGIFDNM 281
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 186/600 (31%), Positives = 317/600 (52%), Gaps = 12/600 (2%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLS 68
L K + I WN+ + +A L M+ ++P+++T I CA+L
Sbjct: 233 LFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELM 292
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ +HG ++ D V +++DMY+KC + A +F +P+RD+ SWNAMI
Sbjct: 293 LLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMIS 352
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G++Q G + LF + Q T++ + + ++ L +S+H + + +G
Sbjct: 353 GYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFAN 412
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ N+ + Y C DL + + + +V WN+++ GCT F ++L +
Sbjct: 413 NPLAVNSLMLMYINCGDLVACFSLLQTVSAA-ADIVCWNTVMAGCTQNGHFWEALKAFNL 471
Query: 249 MIYDGFRPDV----TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
M D PDV + +++S+C E L G +H + + D+ V N LI+MY
Sbjct: 472 MRQD---PDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYG 528
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
+CG+I++AR +F C+R SW MIS ++Q D AL LF +E P+ +T++
Sbjct: 529 RCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFE---PNEITIVG 585
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++S C Q G L GK + L+ N V AL DMYS CG + A ++F + PE++
Sbjct: 586 ILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERS 645
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
V +W +MI+ + +A++LFH+M E RP + TF+++L AC+H+G + +G Y++
Sbjct: 646 VAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYS 705
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
M +++ V + H+ CM D+LGR G+L EA +F++ MP + + G+WG LL AC H ++
Sbjct: 706 NMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDL 765
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
++G VA LFELEP + Y+ ++N+Y GRW LR +++ +KK SL+ +
Sbjct: 766 KMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPAAYSLIDV 825
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 249/508 (49%), Gaps = 10/508 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+YR + WN+ I +V+ A+ LF + + ++ T + A + + +
Sbjct: 34 LYRDVIL--WNAMITASVENQCFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQ 91
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+++HG K+ SD F+ ++DMYAKC L + +F M RD+ SWN+M+ G A
Sbjct: 92 GRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRGCAY 151
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD--ADV 190
+ +K L F M QAD V++ A+ LS + +H +GI +G +
Sbjct: 152 NNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHN 211
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
S N+ IS Y++C D++ AE++F+ E + +VSWN+++ G + ++ + M
Sbjct: 212 SFENSLISLYSQCRDIQAAEILFK--EMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQ 269
Query: 251 YDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
G +PD TVV ++ C L +GR VH + LD SV N+LI MYSKC D+
Sbjct: 270 LLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDV 329
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A +F + +R VSW AMISGY+Q G EA LF + + L T+L+++ C
Sbjct: 330 KRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSC 389
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSW 428
S L+ G+ + G +N + N+L+ MY CG + L + +V W
Sbjct: 390 DSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCW 449
Query: 429 TTMIAGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
T++AGC NG F EAL F+ M + D+ + V V+ AC + L G L
Sbjct: 450 NTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLAL 509
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEA 515
K + ++ + + + GR G+++ A
Sbjct: 510 KTL-MESDIRVQNALITMYGRCGEIENA 536
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 156/515 (30%), Positives = 252/515 (48%), Gaps = 21/515 (4%)
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
T+++ Y++ ++ LFD++ RDV WNAMI + + LF + G
Sbjct: 9 TSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEG 68
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ D T++ + A+ H +L+ + +H G+ +D +CN I YAKC +L +E
Sbjct: 69 VGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSE 128
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
VF G+E R ++SWNS++ GC Y + SL +++ M Y + D ++ +S+
Sbjct: 129 CVFGGME--YRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASAL 186
Query: 271 PEALVQGRLVHSHGIHYGFDLDV---SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
L G+++H GI G+ D+ S N+LIS+YS+C DI +A LF M + VSW
Sbjct: 187 LGELSFGQVIHGWGIKLGYK-DISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSW 245
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYAC 386
AM+ G A + EA L M+ G V PD VTV+ +I C + L G+
Sbjct: 246 NAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTL 305
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
+ + V N+LIDMYSKC + A +F A+PE+ +VSW MI+G + NG EA
Sbjct: 306 RREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQH 365
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
LF Q+++ + + T LA+L +C + FL+ G K+ N L S M +
Sbjct: 366 LFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYI 425
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV-AYRLFELEPHSAAPY 565
G L +Q++ +D W T++ C +N E + A+ L +P
Sbjct: 426 -NCGDLVACFSLLQTVSAAADIVCWNTVMAGCT--QNGHFWEALKAFNLMRQDPDVCHDS 482
Query: 566 VEMANIYA---------LGGRWDGVANLRTMMKRN 591
V + N+ + GG G+A L+T+M+ +
Sbjct: 483 VALFNVISACGNLELLFAGGSLHGLA-LKTLMESD 516
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 169/355 (47%), Gaps = 7/355 (1%)
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
+G A + + ++AY++ D + +F I R V+ WN++I F ++
Sbjct: 1 MGALAHLPTSTSLLTAYSRAADFSSSWALFDEIL--YRDVILWNAMITASVENQCFGVAV 58
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
N + ++ +G D TT++ ++S+ L QGR++H G D + N LI MY
Sbjct: 59 NLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMY 118
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
+KCG++ S+ +F GM R +SW +M+ G A ++L F M + E D V++
Sbjct: 119 AKCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLT 178
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKD--NVMVCNALIDMYSKCGSIGDARELFYALP 421
+S G L G+ + G KD + N+LI +YS+C I A LF +
Sbjct: 179 CAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMK 238
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKGW 480
K +VSW M+ G ALN EA DL H+M L ++P+ VT + ++ C L +G
Sbjct: 239 YKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGR 298
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L + ++ + + + + D+ + +K A +++P + D W ++
Sbjct: 299 AVHGLTLR-REMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIP-ERDLVSWNAMI 351
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 305/594 (51%), Gaps = 4/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I AL ++ + + + P+ T + AC L +HG I
Sbjct: 190 WNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+ + ++ MY K +RL A ++F KM +D +WN MI G+AQ+G E +
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M + G D +++ +A + L + K VH + I G + D CN I YA
Sbjct: 310 LFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL A+ VF + + V+WNS+I G T + + L ++ M + +PD T
Sbjct: 369 KCGDLLAAQEVFDTTK--CKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTF 425
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V LLS + QGR +H I +GF+ ++ + N+L+ +Y+KCG++D +F M
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+SW +I+ D ++ M G +PD TVL ++ C GK
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y G + NV + NALI+MYSKCGS+ + ++F + EK VV+WT +I+ + GE
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL F M + P+ V F+A + AC+H+G +++G +F+ M Y + P + HY+C
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R G L +A +F+ SMP+K DA +WG LL AC+ N I + V+ ++ EL
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++NIYA G+WD V +R MK +KK PG S + I + F D
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGD 779
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 261/526 (49%), Gaps = 8/526 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I ++ + WNS IR +AL + M++ ++P+ TFP + +CA++ D
Sbjct: 80 ISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLEL 139
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++H H ++ F SD+++ ++DMY++ LD A +F++M +RD SWN++I G+
Sbjct: 140 GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCS 199
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
GF E L +++ R+ G+ D T+ + A + +VH IG+ DV +
Sbjct: 200 NGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVII 259
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N +S Y K L+ A VF + ++ V+WN++I G + + S+ + MI D
Sbjct: 260 GNGLLSMYFKFERLREARRVFSKM--AVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-D 316
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
GF PD+ ++ S + +C L G+ VH + I GF+ D N LI MY+KCGD+ +A
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ +FD + V+W ++I+GY Q G E L F M+ + PD VT + ++S Q
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQL 435
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
+ G+ G + +++ N+L+D+Y+KCG + D ++F + ++SW T+I
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQ 491
A + + ++M L P+ T L +L C+ +G + K ++
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFE 555
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
N + + + ++ + G L+ + + M K D W L+ A
Sbjct: 556 SNVPIGN--ALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISA 598
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 162/312 (51%), Gaps = 2/312 (0%)
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
AK+ L++VHS I G+ V IS YA+ D + VFR I V WN
Sbjct: 32 AKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP-TNNVYLWN 90
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
SII T+ F +L +Y M +PD T S+++SC L G +VH H +
Sbjct: 91 SIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEM 150
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF+ D+ + N LI MYS+ D+D+AR++F+ M +R VSW ++ISGY G ++AL ++
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
G VPD T+ S++ CG A++ G G+ +V++ N L+ MY K
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ +AR +F + K V+W TMI G A G ++ LF M++ P+ ++ + +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329
Query: 468 QACTHAGFLEKG 479
+AC +G L+ G
Sbjct: 330 RACGQSGDLQVG 341
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 3/276 (1%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL + + Q R VHS I G L V LIS Y++ D S+ +F +
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 323 TRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V W ++I G +AL + M PD T S+I+ C + LELG
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+A G + ++ + NALIDMYS+ + +AR +F + + VSW ++I+G NG +
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+ALD++H+ + P+ T +VL AC +++G ++ K+ + ++ +
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKI-GIAGDVIIGNG 262
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + + +L+EA M +K D+ W T++C
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVK-DSVTWNTMICG 297
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I +V ++ + M+ + P+ T I C+ L+ + IHG
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHG 547
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+I KS F S++ + +++MY+KC L+ K+F M ++DV +W A+I F G +K
Sbjct: 548 YIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKK 607
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
L F +M L G+ D V + A H+
Sbjct: 608 ALKAFQDMELSGVLPDSVAFIAFIFACSHS 637
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 313/594 (52%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + + +++ ++ + E + T P + K C +L Y Q +H ++
Sbjct: 220 WNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVI 279
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K +D + + +V+MY++C + AY++F ++ + DV +AMI F + + L
Sbjct: 280 KRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALD 339
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M +G++ + +G+ A +L +SVH++ + G V + ++ Y
Sbjct: 340 LFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYV 399
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K ++ A + F I E SWN+I+ G + L ++ M +GF + T
Sbjct: 400 KVGAVQDATVTFDLIHEP--DTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTY 457
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS+L C L G VH+ + G D V L+ MY++ G SA +F+ + +
Sbjct: 458 VSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE 517
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R SWT ++SGYA+ + ++ + F +M P T+ +S C +L G
Sbjct: 518 RDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQL 577
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
++A G +V V AL+DMY KCG+I DA LF+ + V+W T+I G + +G
Sbjct: 578 HSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHG 636
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+ALD F QM++ RP+ +TF+ VL AC+HAG L +G YF ++ +Y + P + HY+C
Sbjct: 637 YKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYAC 696
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M D+L + G+L EA + MP+ D+ IW T+L AC+IHRNIEI E A RLFELEPH
Sbjct: 697 MVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHD 756
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A+ + ++NIYA GRW V +R ++ + VKK PG S + ING+ F +D
Sbjct: 757 ASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/523 (23%), Positives = 231/523 (44%), Gaps = 5/523 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + I ++ +AL +F RM + I PN T + KAC+ S ++ +HG
Sbjct: 116 IVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHG 175
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+VK D +V +++V+ Y C LD A + +P+R SWNA++ G+A+ G +
Sbjct: 176 QVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRR 235
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
V+ + + G + T+ + + + +SVH+ I G++ D + + +
Sbjct: 236 VMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVE 295
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y++C + A VF I+E VV +++I D ++L+ + M G +P+
Sbjct: 296 MYSRCLSAEEAYEVFIRIDEP--DVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNH 353
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
V + R VH++ + GF + V + +++MY K G + A FD
Sbjct: 354 YIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDL 413
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + SW ++S + + ++ LR+F M G + T +S++ C L G
Sbjct: 414 IHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFG 473
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
GL+++ V L+DMY++ G A +F L E+ SWT +++G A
Sbjct: 474 TQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKT 533
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
E + ++ F M+ ++RP+ T L C+ L G + K + ++
Sbjct: 534 EEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVS- 592
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ D+ + G + +A + D W T++C H
Sbjct: 593 -GALVDMYVKCGNIADAEMLFHESETR-DQVAWNTIICGYSQH 633
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 185/408 (45%), Gaps = 2/408 (0%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
CA Q +H +++S D F+ ++++MY KC RL A ++FD MP RD+ +W
Sbjct: 60 CAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAW 119
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
AMI G ++ L +F M GI + T+ + +A H VH +
Sbjct: 120 TAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVK 179
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
+ D V ++ + AY C +L AE V G+ E R+ VSWN+++ G + +
Sbjct: 180 LNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPE--RSDVSWNALLNGYARHGDYRRVM 237
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
++ G T+ ++L C+ G+ VH+ I G + D + + L+ MY
Sbjct: 238 IIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMY 297
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
S+C + A +F + + V +AMIS + + EAL LF M G P+ +
Sbjct: 298 SRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFV 357
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ ++G L + Y G V +A+++MY K G++ DA F + E
Sbjct: 358 GIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEP 417
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
SW T+++ + L +F QM N+ T+++VL+ CT
Sbjct: 418 DTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCT 465
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 125/254 (49%), Gaps = 3/254 (1%)
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
L C L +G+ +H+ + D ++++L++MY KCG + AR +FDGM R
Sbjct: 57 LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
V+WTAMIS + GD D+AL +F M G P+ T+ S++ C +
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQ 176
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
D+ V ++L++ Y+ CG + A + LPE++ VSW ++ G A +G++
Sbjct: 177 VVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRV 236
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMA 503
+ + +++ ++ T VL+ C G + G + +++ + + + LN SC+
Sbjct: 237 MIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLN--SCLV 294
Query: 504 DLLGRKGKLKEALD 517
++ R +EA +
Sbjct: 295 EMYSRCLSAEEAYE 308
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 323/599 (53%), Gaps = 14/599 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I+ +A+ + RM ++ + T+PF+ K+ A +S + IH ++
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAY---KLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
K F SD++V +++ +Y K L CA+ K+F++MP+RD+ SWN+MI G+ +G
Sbjct: 158 KLGFVSDVYVCNSLISLYMK---LGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFS 214
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWI 197
L LF M G + D + M A H + K +H + ++ DV V + +
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSIL 274
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS-LNFYRHMIYDGFRP 256
Y+K ++ AE +F G+ + R +V+WN +IG + D+ L F + +G +P
Sbjct: 275 DMYSKYGEVSYAERIFNGMIQ--RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
DV T ++LL + A+++GR +H + + GF + + LI MY +CG + SA +F
Sbjct: 333 DVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIF 388
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M ++ +SW ++I+ Y Q G AL LF + + VPD T+ S++ +S +L
Sbjct: 389 DRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLS 448
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ Y N ++ N+L+ MY+ CG + DAR+ F + K VVSW ++I A
Sbjct: 449 EGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYA 508
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
++G ++ LF +M+ + PN+ TF ++L AC+ +G +++GW YF M + Y ++P +
Sbjct: 509 VHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 568
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM DL+GR G A F++ MP A IWG+LL A + H++I I E+ A ++F+
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFK 628
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+E + YV + N+YA GRW+ V ++ +M+ + + +S V GK+ FT D
Sbjct: 629 MEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGD 687
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 200/384 (52%), Gaps = 10/384 (2%)
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
+A ++ A +LFD+M D WN MI GF G + + + M G++AD T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ ++ L K +H+ I +G +DV VCN+ IS Y K AE VF + E
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 219 GLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
R +VSWNS+I G GD F SL ++ M+ GF+PD + +S L +C + G
Sbjct: 194 --RDIVSWNSMISGYLALGDGF-SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 278 RLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
+ +H H + + DV V+ +++ MYSK G++ A +F+GM R V+W MI YA+
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 337 KGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
G + +A F M E G PD++T ++++ S LE G+ YA G +++
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILE-GRTIHGYAMRRGFLPHMV 366
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ ALIDMY +CG + A +F + EK V+SW ++IA NG+ AL+LF ++ +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG 479
L P+ T ++L A + L +G
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEG 450
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 202/406 (49%), Gaps = 9/406 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I + + +L+LF+ M K +P+ + AC+ + + IH
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 79 HIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
H V+S + D+ V T+++DMY+K + A ++F+ M R++ +WN MI +A+ G +
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 138 KVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
F M G+Q D +T + L A+ + +++H + + G + +
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLETAL 371
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I Y +C LK AE++F + E + V+SWNSII K +L ++ + P
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAE--KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TT+ S+L + +L +GR +H++ + + + ++N+L+ MY+ CGD++ AR F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + + VSW ++I YA G ++ LF M A+ P+ T S+++ C SG ++
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
G ++F++ G+ + ++D+ + G+ A+ +P
Sbjct: 550 EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 314/604 (51%), Gaps = 5/604 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ S I WN ++ E + + A+ F+ + ++ I +++T I A D +
Sbjct: 855 QGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++KS F + V ++++MY+K + A K F P+ D+ SWN MI +AQ
Sbjct: 915 QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQA---AIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ +C F ++ G++ D T+ + +A ++ +L VH + I G+ D
Sbjct: 975 LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V I Y+K + AE + G + + SWN+I+ G +K +L + M
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYD--FDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G D T+ + + + C L QG+ + ++ I GF+ D+ V + ++ MY KCGD+ +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A LF + V+WT MISGY + GD D AL ++ M +G PD T ++I
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
ALE GK + V +L+DMY KCGS+ DA +F + + VV W M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ G A +G EAL+LF M ++P++VTF+ VL AC+H+G + + YF+ M K Y
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ PE+ HYSC+ D LGR G+++EA + + SMP K+ A ++ LL AC+ + E + VA
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+L L+P ++ YV ++NIYA +WD V + R MMK VKK PG S + + K F
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLF 1452
Query: 612 TVED 615
V+D
Sbjct: 1453 VVDD 1456
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 182/404 (45%), Gaps = 36/404 (8%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
S+ +HG+ VK F D+FV +V++Y K + A LFDKMP+RD WN M+ + +
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVT---VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F ++ L F G DF V+G GV++D
Sbjct: 796 NSFQDEALRFFSAFHRSGFXPDFSNLHCVIG------------------------GVNSD 831
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
VS + K +KM ++G + +WN + + + +++ ++ +
Sbjct: 832 VSNNRKRHAEQVKAYAMKMFPF-----DQG-SNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+ D T+V +LS+ V + L G +H+ I F V V N+L++MYSK G +
Sbjct: 886 LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+A F + +SW MIS YAQ EA+ F + G PD T+ S++ C
Sbjct: 946 YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Query: 370 --GQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
G G LG YA G+ ++ V ALID+YSK G + +A L + + +
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
SW ++ G + + +AL+ F M E+ + + +T ++A
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 213/485 (43%), Gaps = 43/485 (8%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
++ ++D + H IV S D ++ ++ MY+KC L A ++FDK DRD+
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 122 SWNAMIVGFAQMG--FLEKVL---CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+WN+++ +AQ E VL LF +R G +T+ L + + + + + ++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH + + IG + D+ V ++ Y K + A L+F + E R V WN ++
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE--RDAVLWNVMLKAYVEN 796
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D++L F+ GF PD + + H + G + DVS
Sbjct: 797 SFQDEALRFFSAFHRSGFXPDFSNL---------------------HCVIGGVNSDVS-- 833
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N + F FD + +W ++ + G + A+ F + +
Sbjct: 834 NNRKRHAEQVKAYAMKMFPFDQGSN--IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
D VT++ ++S + L+LG+ V V N+L++MYSK G + A +
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT 951
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F PE ++SW TMI+ A N +EA+ F ++ L+P++ T +VL+AC+
Sbjct: 952 FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEG 1011
Query: 477 EKGWGYFNLMTK--VYQVNPELNHYS----CMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
E YF L ++ VY + + + S + DL + GK+ EA +F+ D
Sbjct: 1012 E----YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDFDLAS 1066
Query: 531 WGTLL 535
W ++
Sbjct: 1067 WNAIM 1071
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LGK + G + + N LI MYSKCGS+ AR++F ++ +V+W +++A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 435 CALNGE-----FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL---EKGWGYFNLM 486
A + +E LF + E R+T +L+ C +GF+ E GY
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY---- 742
Query: 487 TKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
++ EL+ + + ++ + G + +A MP + DA +W +L A
Sbjct: 743 --AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 314/604 (51%), Gaps = 5/604 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ S I WN ++ E + + A+ F+ + ++ I +++T I A D +
Sbjct: 855 QGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++KS F + V ++++MY+K + A K F P+ D+ SWN MI +AQ
Sbjct: 915 QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQA---AIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ +C F ++ G++ D T+ + +A ++ +L VH + I G+ D
Sbjct: 975 LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V I Y+K + AE + G + + SWN+I+ G +K +L + M
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYD--FDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G D T+ + + + C L QG+ + ++ I GF+ D+ V + ++ MY KCGD+ +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A LF + V+WT MISGY + GD D AL ++ M +G PD T ++I
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
ALE GK + V +L+DMY KCGS+ DA +F + + VV W M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ G A +G EAL+LF M ++P++VTF+ VL AC+H+G + + YF+ M K Y
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ PE+ HYSC+ D LGR G+++EA + + SMP K+ A ++ LL AC+ + E + VA
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+L L+P ++ YV ++NIYA +WD V + R MMK VKK PG S + + K F
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLF 1452
Query: 612 TVED 615
V+D
Sbjct: 1453 VVDD 1456
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 182/404 (45%), Gaps = 36/404 (8%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
S+ +HG+ VK F D+FV +V++Y K + A LFDKMP+RD WN M+ + +
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVT---VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F ++ L F G DF V+G GV++D
Sbjct: 796 NSFQDEALRFFSAFHRSGFFPDFSNLHCVIG------------------------GVNSD 831
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
VS + K +KM ++G + +WN + + + +++ ++ +
Sbjct: 832 VSNNRKRHAEQVKAYAMKMFPF-----DQG-SNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+ D T+V +LS+ V + L G +H+ I F V V N+L++MYSK G +
Sbjct: 886 LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+A F + +SW MIS YAQ EA+ F + G PD T+ S++ C
Sbjct: 946 YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Query: 370 --GQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
G G LG YA G+ ++ V ALID+YSK G + +A L + + +
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
SW ++ G + + +AL+ F M E+ + + +T ++A
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 213/485 (43%), Gaps = 43/485 (8%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
++ ++D + H IV S D ++ ++ MY+KC L A ++FDK DRD+
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 122 SWNAMIVGFAQMG--FLEKVL---CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+WN+++ +AQ E VL LF +R G +T+ L + + + + + ++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH + + IG + D+ V ++ Y K + A L+F + E R V WN ++
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE--RDAVLWNVMLKAYVEN 796
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D++L F+ GF PD + + H + G + DVS
Sbjct: 797 SFQDEALRFFSAFHRSGFFPDFSNL---------------------HCVIGGVNSDVS-- 833
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N + F FD + +W ++ + G + A+ F + +
Sbjct: 834 NNRKRHAEQVKAYAMKMFPFDQGSN--IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
D VT++ ++S + L+LG+ V V N+L++MYSK G + A +
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT 951
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F PE ++SW TMI+ A N +EA+ F ++ L+P++ T +VL+AC+
Sbjct: 952 FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEG 1011
Query: 477 EKGWGYFNLMTK--VYQVNPELNHYS----CMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
E YF L ++ VY + + + S + DL + GK+ EA +F+ D
Sbjct: 1012 E----YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDFDLAS 1066
Query: 531 WGTLL 535
W ++
Sbjct: 1067 WNAIM 1071
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 30/255 (11%)
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LGK + G + + N LI MYSKCGS+ AR++F ++ +V+W +++A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 435 CALNGE-----FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL---EKGWGYFNLM 486
A + +E LF + E R+T +L+ C +GF+ E GY
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY---- 742
Query: 487 TKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
++ EL+ + + ++ + G + +A MP + DA +W +L A + +
Sbjct: 743 --AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKAY-VENSF 798
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIY-ALGGRWDGVANLRT----MMKRNQVKKFP-- 597
+ + F H + + + +N++ +GG V+N R +K +K FP
Sbjct: 799 QDEALRFFSAF----HRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFD 854
Query: 598 -GQSLVHINGKTCTF 611
G ++ N K F
Sbjct: 855 QGSNIFAWNKKLTEF 869
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 316/589 (53%), Gaps = 4/589 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S+I V +N++ A+ LF+ M + PN++T + +A + L ++I G ++
Sbjct: 57 WTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVI 116
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S++ V T ++ Y+ D + +K+F++ P +D+ W+AM+ + G +
Sbjct: 117 KLGFESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFE 175
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ G++ + V+++ + A + L K +H F I +V N+ + YA
Sbjct: 176 IFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYA 235
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + K + LVF I E + ++SW +II GC D ++ + M + F D T V
Sbjct: 236 KCRNFKASMLVFDQILE--KDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIV 293
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
L+ + + + G H + G VS+ L+ MY+K G+++SA +FD +
Sbjct: 294 QDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNK 353
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +SW+AMIS +A AL F M++ E P+ +T +S++ C GA ELG+
Sbjct: 354 KDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESI 413
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+A G N + +ALID+Y K G I R +F +P K +V W++MI G LNG
Sbjct: 414 QAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCG 473
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL+ F M+ ++PN V F++VL AC+H G +GW F+ M + Y + P+L HY+C
Sbjct: 474 DEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYAC 533
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK-IHRNIEIGEYVAYRLFELEPH 560
M DL+ R+G ++ AL FV MP++ D IWG LL C+ H +IEI E VA RL L+P
Sbjct: 534 MVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQ 593
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
+ + YV ++N+YA GRW V LR ++ +KK G S++ C
Sbjct: 594 NTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEAQLDFC 642
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 203/418 (48%), Gaps = 7/418 (1%)
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+V SW + I + E + LF M + + + VTV+ + +A +++ +
Sbjct: 53 NVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVIC 112
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
I +G +++VSV I Y+ D+ + +F + ++ +V W++++ C +
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIFN--QTPIKDLVLWSAMVSACVKSGQ 169
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+ ++ +R M YDG P+ ++VS+L +C AL+ G+ +H I F +V N+
Sbjct: 170 YGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNS 229
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+ MY+KC + ++ +FD + ++ +SWT +I G + EA + F M+ + D
Sbjct: 230 LVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGAD 289
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
V +I Q+ + G F + GL V + AL+ MY+K G + A +F
Sbjct: 290 ETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFD 349
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
L +K +SW+ MI+ A + AL+ F QM D RPN +TF+++LQAC+ G E
Sbjct: 350 QLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQEL 409
Query: 479 GWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
G TK Y N L+ S + DL + G++ + +P K D W +++
Sbjct: 410 GESIQAHATKAGYLSNAFLS--SALIDLYCKFGRINQGRAIFNEIPTK-DLVCWSSMI 464
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 4/223 (1%)
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F G D +SWT+ IS ++ + A+ LF M + P+ VTVLS+I G
Sbjct: 47 FHGEKDNV-ISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLE 105
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
++ + G + V V ALI YS +G ++F P K +V W+ M++ C
Sbjct: 106 DMMRVICGSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSAC 164
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+G++ EA ++F M + PN V+ +++L AC + G L G K +P
Sbjct: 165 VKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIK-KMFHPL 223
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
N ++ + D+ + K ++ V ++ D W T++ C
Sbjct: 224 TNVHNSLVDMYAKCRNFKASM-LVFDQILEKDLISWTTIIRGC 265
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 192/576 (33%), Positives = 314/576 (54%), Gaps = 6/576 (1%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
LF +M+ + PN T + A +H +VK F I V +++ +Y+
Sbjct: 181 LFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYS 240
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
+ L A +FDKM RD +WN+MI G+ + G +V +F M+L G++ +T
Sbjct: 241 RLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFAS 300
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ ++ + L+L+K + + G D V + A +KC ++ A +F +EEG
Sbjct: 301 VIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEG- 359
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ VVSW ++I GC D ++N + M +G +P+ T ++L+ V V +
Sbjct: 360 KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT--VHYPVFVSE--M 415
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+ I ++ SV L+ Y K G+ A +F+ + + ++W+AM++GYAQ G+
Sbjct: 416 HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGET 475
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-SGALELGKWFDNYACSGGLKDNVMVCNA 399
+EA +LF + G P+ T S+I+ C + A E GK F YA L + + V +A
Sbjct: 476 EEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSA 535
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+ MY+K G+I A E+F E+ +VSW +MI+G + +G+ +AL++F +M + ++ +
Sbjct: 536 LVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVD 595
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VTF+ V+ ACTHAG +EKG YFN M + +NP + HYSCM DL R G L++A+ +
Sbjct: 596 AVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGII 655
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
MP A +W TLL A ++HRN+E+GE A +L L+P +A YV ++N+YA G W
Sbjct: 656 NEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQ 715
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
N+R +M + +VKK PG S + + KT +F D
Sbjct: 716 ERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGD 751
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 250/531 (47%), Gaps = 12/531 (2%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
+R +T+ + N + + +AL LF + + ++P+ T + CA D
Sbjct: 53 HRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLG 112
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H VK + V T++VDMY K + ++ ++FD+M +R+V SW +++ G++
Sbjct: 113 RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWN 172
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G V LF M+ G+ + TV + A ++ + + VH+ + G + + V
Sbjct: 173 GLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVF 232
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N+ IS Y++ L+ A VF +E +R V+WNS+I G + + + M G
Sbjct: 233 NSLISLYSRLGMLRDARDVFDKME--IRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAG 290
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+P T S++ SC L +L+ + GF D VI L+ SKC ++D A
Sbjct: 291 VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDAL 350
Query: 314 FLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
LF M + + VSWTAMISG Q G D+A+ LF M G P+ T ++++
Sbjct: 351 SLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV 410
Query: 373 GALELGKWF--DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
E+ NY S V AL+D Y K G+ DA ++F + K +++W+
Sbjct: 411 FVSEMHAEVIKTNYERSSS------VGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSA 464
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
M+AG A GE EA LFHQ+++ ++PN TF +V+ AC + F+
Sbjct: 465 MLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKM 524
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
++N L S + + ++G + A + + + D W +++ H
Sbjct: 525 RLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQH 574
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 185/366 (50%), Gaps = 11/366 (3%)
Query: 108 AYKLFDKMPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT---VMGLT 162
A+ LFDK+P R + N ++ +++ ++ L LF ++ +Q D T V +
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
++ K L + VH + G+ VSV + + Y K ++ VF E G R
Sbjct: 104 AGSLDGK---LGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFD--EMGERN 158
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VVSW S++ G ++ + + M Y+G P+ TV +++++ V + G VH+
Sbjct: 159 VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA 218
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+ +GF+ + V N+LIS+YS+ G + AR +FD M R V+W +MI+GY + G E
Sbjct: 219 MVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLE 278
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
+F M+ AG P +T S+I C L L K A G + +V AL+
Sbjct: 279 VFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMV 338
Query: 403 MYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
SKC + DA LF + E K VVSWT MI+GC NG +A++LF QM ++PN
Sbjct: 339 ALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHF 398
Query: 462 TFLAVL 467
T+ A+L
Sbjct: 399 TYSAIL 404
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 139/263 (52%)
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
+A +F I T+ N ++ + + ++LN + +++ +PD +T+ + +
Sbjct: 43 IAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNI 102
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C GR VH + +G VSV +L+ MY K +++ R +FD M +R VSW
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
T++++GY+ G LF M+ G +P+ TV ++I+ G + +G
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G ++ + V N+LI +YS+ G + DAR++F + + V+W +MIAG NG+ +E ++
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282
Query: 448 FHQMMELDLRPNRVTFLAVLQAC 470
F++M ++P +TF +V+++C
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSC 305
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+I + + W++ + E +A LF ++ K I+PN TF + ACA +
Sbjct: 452 EIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAA 511
Query: 72 -YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ H + +K + + V + +V MYAK +D A+++F + +RD+ SWN+MI G+
Sbjct: 512 EQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGY 571
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+Q G +K L +F M+ + D VT +G+ A HA
Sbjct: 572 SQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHA 609
>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 336/654 (51%), Gaps = 76/654 (11%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC----------------- 64
WNS I ++ +A +F++M K +++PN +TF I C
Sbjct: 515 WNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVM 574
Query: 65 ------------------AKLSD-----FLYSQM----------IHGHIVKS---PFW-- 86
AKL D F++ QM I G+ + S PF+
Sbjct: 575 KYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISGYGIMSMGRPFFWV 634
Query: 87 ---------------SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
S + + ++ Y+ C +L ++KLF KMP R+ SWN +I G
Sbjct: 635 RLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCV 694
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G +K + L + M+ ++ D VT++ + ++L ++H + I G DVS
Sbjct: 695 HNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVS 754
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N IS Y C D+ + +F + R++VSWN++I G + ++ + + MI
Sbjct: 755 LVNALISMYFNCGDINAGKFLFEVMP--WRSIVSWNALITGYRFHYLQNEVMASFCQMIX 812
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G +P+ T+++LL SC L+QG+ +H+ + G ++ +I +LISMY++ +I+S
Sbjct: 813 EGQKPNYVTLLNLLPSCX---TLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINS 869
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
FLF+ W A++S Y Q + E++ F + A PD +T LS+IS C Q
Sbjct: 870 FIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQ 929
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
+L L Y G ++++ NALID++++CG+I A+++F L K VSW+TM
Sbjct: 930 LSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTM 989
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G L+G+ AL L QM ++P+ +T+ +VL AC+H GF+++GW FN M +
Sbjct: 990 INGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVE-EG 1048
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V + HY+CM DLLGR G+L EA DFV+ +P K + +LL AC IH N+++GE +
Sbjct: 1049 VPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHGNVKLGEKIC 1108
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
LFEL+P ++ YV + NIYA GRW +R+ M+ Q++K PG SLV N
Sbjct: 1109 SLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVEGN 1162
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 219/448 (48%), Gaps = 33/448 (7%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N IR D L ++ + + ++ TFPF+ KAC+ L ++ +H +++
Sbjct: 314 NLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLR 373
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ F ++ +QT +VD YAK R+ A + DK+ D+ +WNA+I G++ GF ++V +
Sbjct: 374 TAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEV 433
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
+ +G++ + T + K L + KS+H F + G +D + IS YA
Sbjct: 434 LRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAG 493
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
+L +A +F E + VV WNS+I K ++ ++ M+ +P+V T V
Sbjct: 494 GGNLFIARDLFDSAAE--KNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFV 551
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S++ C G+ +H+H + Y D +SV L+SMY+K GD +SA F+F M +
Sbjct: 552 SIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRK 611
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
T +MISGY + R FF + + A++ GK FD
Sbjct: 612 TSYR-DSMISGYG----IMSMGRPFFWVRLLMHL-----------------AIKTGKEFD 649
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+ + + NAL+ YS CG + + +LF +P + +SW T+I+GC NG+
Sbjct: 650 SX---------LNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTK 700
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQAC 470
+A+ L H+M + + + VT ++++ C
Sbjct: 701 KAVALLHKMQQEKMELDLVTLISIIPIC 728
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 192/464 (41%), Gaps = 44/464 (9%)
Query: 84 PFWSDIFVQTTMVDMYAKCDRL---------DCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
P S + V+ M D Y + + + A F+ + V N MI G
Sbjct: 265 PLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHG 324
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E VLC++ R++G +D T + +A + + + VH + + ++ +
Sbjct: 325 LFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQT 384
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ YAK + A LV I + +V+WN++I G + + R ++ G
Sbjct: 385 ALVDFYAKTGRMVKARLVLDKISQP--DLVTWNALISGYSLNGFDKEVFEVLRQILEMGL 442
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+P+V+T S++ C + L G+ +H + GF D + LISMY+ G++ AR
Sbjct: 443 KPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARD 502
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LFD ++ V W +MIS YAQ EA ++F M A P++VT +S+I C S
Sbjct: 503 LFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSAN 562
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
GK + L + V AL+ MY+K G A +FY +P KT +MI+G
Sbjct: 563 FWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYR-DSMISG 621
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
+ +M + V L L T F +
Sbjct: 622 --------------YGIMSMGRPFFWVRLLMHLAIKTGKEF-----------------DS 650
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
LN + + GKL + Q MP++ +A W TL+ C
Sbjct: 651 XLNISNALLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISGC 693
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 305/594 (51%), Gaps = 4/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I AL ++ + + + P+ T + AC L +HG I
Sbjct: 190 WNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+ + ++ MY K +RL A ++F KM +D +WN MI G+AQ+G E +
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M + G D +++ +A + L + K VH + I G + D CN I YA
Sbjct: 310 LFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL A+ VF + + V+WNS+I G T + + L ++ M + +PD T
Sbjct: 369 KCGDLLAAQEVFDTTK--CKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTF 425
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V LLS + QGR +H I +GF+ ++ + N+L+ +Y+KCG++D +F M
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+SW +I+ D ++ M G +PD TVL ++ C GK
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y G + NV + NALI+MYSKCGS+ + ++F + EK VV+WT +I+ + GE
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL F M + P+ V F+A + AC+H+G +++G +F+ M Y + P + HY+C
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R G L +A +F+ SMP+K DA +WG LL AC+ N I + V+ ++ EL
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++NIYA G+WD V +R MK +KK PG S + I + F D
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGD 779
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 261/526 (49%), Gaps = 8/526 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I ++ + WNS IR +AL + M++ ++P+ TFP + +CA++ D
Sbjct: 80 ISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLEL 139
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++H H ++ F SD+++ ++DMY++ LD A +F++M +RD SWN++I G+
Sbjct: 140 GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCS 199
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
GF E L +++ R+ G+ D T+ + A + +VH IG+ DV +
Sbjct: 200 NGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVII 259
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N +S Y K L+ A VF + ++ V+WN++I G + + S+ + MI D
Sbjct: 260 GNGLLSMYFKFERLREARRVFSKM--AVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-D 316
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
GF PD+ ++ S + +C L G+ VH + I GF+ D N LI MY+KCGD+ +A
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ +FD + V+W ++I+GY Q G E L F M+ + PD VT + ++S Q
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQL 435
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
+ G+ G + +++ N+L+D+Y+KCG + D ++F + ++SW T+I
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQ 491
A + + ++M L P+ T L +L C+ +G + K ++
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFE 555
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
N + + + ++ + G L+ + + M K D W L+ A
Sbjct: 556 SNVPIGN--ALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISA 598
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 162/312 (51%), Gaps = 2/312 (0%)
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
AK+ L++VHS I G+ V IS YA+ D + VFR I V WN
Sbjct: 32 AKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP-TNNVYLWN 90
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
SII T+ F +L +Y M +PD T S+++SC L G +VH H +
Sbjct: 91 SIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEM 150
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF+ D+ + N LI MYS+ D+D+AR++F+ M +R VSW ++ISGY G ++AL ++
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
G VPD T+ S++ CG A++ G G+ +V++ N L+ MY K
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ +AR +F + K V+W TMI G A G ++ LF M++ P+ ++ + +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329
Query: 468 QACTHAGFLEKG 479
+AC +G L+ G
Sbjct: 330 RACGQSGDLQVG 341
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 3/276 (1%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL + + Q R VHS I G L V LIS Y++ D S+ +F +
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 323 TRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V W ++I G +AL + M PD T S+I+ C + LELG
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+A G + ++ + NALIDMYS+ + +AR +F + + VSW ++I+G NG +
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+ALD++H+ + P+ T +VL AC +++G ++ K+ + ++ +
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKI-GIAGDVIIGNG 262
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + + +L+EA M +K D+ W T++C
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVK-DSVTWNTMICG 297
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I +V ++ + M+ + P+ T I C+ L+ + IHG
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHG 547
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+I KS F S++ + +++MY+KC L+ K+F M ++DV +W A+I F G +K
Sbjct: 548 YIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKK 607
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
L F +M L G+ D V + A H+
Sbjct: 608 ALKAFQDMELSGVLPDSVAFIAFIFACSHS 637
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 323/606 (53%), Gaps = 2/606 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
K+ S I WN I + +L + K +++ + +F AC +
Sbjct: 197 FKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEF 256
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H +K F D +V T+++ MY KC ++ A K+F+++PD+++ WNA+I
Sbjct: 257 VSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISA 316
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G+ L ++ M+L + +D T++ + ++ A L + +H+ + + +
Sbjct: 317 YVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSS 376
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+++ + ++ Y+K D A +F ++E R VV+W S+I G K+ ++L+F+R M
Sbjct: 377 ITIQSALLTMYSKFGDSNYANSIFSTMKE--RDVVAWGSVISGFCQNRKYKEALDFFRAM 434
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
D +PD + S++S+C E + G +H I G LDV V ++L+ MYSK G
Sbjct: 435 EADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFP 494
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ A +F M + V+W ++IS Y + D ++ LF + PD V+ S+++
Sbjct: 495 ERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAI 554
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
AL GK Y + ++ V N LIDMY KCG + A+ +F + EK +V+W
Sbjct: 555 SSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWN 614
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+MI G +GE +A++LF +M ++P+ VTFL++L +C H+G +E+G F +M
Sbjct: 615 SMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMK 674
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P + HY + DL GR G L +A FV++MP++ D IW +LLC+CKIH N+E+GE
Sbjct: 675 FGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEM 734
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA +L +EP + YV++ N+Y WD ANLR MK +KK PG S + + K
Sbjct: 735 VANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVD 794
Query: 610 TFTVED 615
F D
Sbjct: 795 VFYSGD 800
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 258/522 (49%), Gaps = 34/522 (6%)
Query: 25 QIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSP 84
+I+ V + + +AL L+ K+ + T+P + KACA LS+ Y + IH I+ +
Sbjct: 27 EIKSLVQQRQYIEALKLY---TKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTG 83
Query: 85 FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-----DVASWNAMIVGFAQMGFLEKV 139
SD ++ ++++++Y KC A K+FD++P DV WN++I G+ + G LE+
Sbjct: 84 LHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEG 143
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ F M+ G + K +HS+ + ++ D + I
Sbjct: 144 MVQFGRMQSSGYKEG--------------------KQIHSYIVRNMLNFDPFLETALIDT 183
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC A +F+ +++ +V+WN +IGG +++SL +Y + + +
Sbjct: 184 YFKCGRPTEARYLFKKLKDR-SNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSS 242
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ LS+C E + G+ VH I GF+ D V +L++MY KC I+SA +F+ +
Sbjct: 243 SFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEV 302
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
D+ W A+IS Y G +ALR++ M+ + D T+L++++ +G +LG+
Sbjct: 303 PDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGR 362
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
L+ ++ + +AL+ MYSK G A +F + E+ VV+W ++I+G N
Sbjct: 363 LIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNR 422
Query: 440 EFVEALDLFHQMMELDL-RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
++ EALD F + ME DL +P+ +++ ACT ++ G + K + ++
Sbjct: 423 KYKEALDFF-RAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKS-GLQLDVFV 480
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL-CACK 539
S + D+ + G + A + MP+K+ W +++ C C+
Sbjct: 481 ASSLLDMYSKFGFPERAGNIFSDMPLKNLVA-WNSIISCYCR 521
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 269/592 (45%), Gaps = 60/592 (10%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + + ++ F RM+ S + + IH +IV
Sbjct: 127 WNSIIDGYFRFGQLEEGMVQFGRMQS--------------------SGYKEGKQIHSYIV 166
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFLEKVL 140
++ D F++T ++D Y KC R A LF K+ DR ++ +WN MI GF + G E L
Sbjct: 167 RNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSL 226
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+ + ++ + A + +S K VH I +G + D V + ++ Y
Sbjct: 227 EYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMY 286
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC ++ AE VF + + + + WN++I D+L Y+ M D T
Sbjct: 287 GKCQMIESAEKVFNEVPD--KEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFT 344
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++++L+S GRL+H+ + +++ + L++MYSK GD + A +F M
Sbjct: 345 ILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMK 404
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R V+W ++ISG+ Q EAL F AMEA PD + S+IS C ++LG
Sbjct: 405 ERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCT 464
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ GL+ +V V ++L+DMYSK G A +F +P K +V+W ++I+ N
Sbjct: 465 IHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNL 524
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG----------WGYFNLMTK-- 488
+++LF Q++ DL P+ V+F +VL A + L KG W F+L +
Sbjct: 525 PDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENT 584
Query: 489 ----------------VYQVNPELN--HYSCMADLLGRKGKLKEAL---DFVQSMPIKSD 527
+++ E N ++ M G G+ +A+ D ++S IK D
Sbjct: 585 LIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPD 644
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRL---FELEPHSAAPYVEMANIYALGG 576
+ +LL +C IE G ++ + F +EP YV + ++Y G
Sbjct: 645 DVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPR-MEHYVNIVDLYGRAG 695
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 307/575 (53%), Gaps = 2/575 (0%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
L M I PN + + ACA L D Y +HG+++K + SD F ++DMYA
Sbjct: 175 LVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYA 234
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
K + A +F ++P D+ SWNA+I G + L L M + T+
Sbjct: 235 KSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSS 294
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+A + L + +HS + + ++ D V I Y+KC L+ A +VF +
Sbjct: 295 ALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX-- 352
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ V+ WNSII G + ++++ + +M +G + TT+ ++L S +A V
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQV 412
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+ I G+ D V N+L+ Y KC ++ A +F+ V++T+MI+ Y+Q G
Sbjct: 413 HTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLG 472
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
+EAL+++ M+ PD S+ + C A E GK + GL +V N+L
Sbjct: 473 EEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSL 532
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
++MY+KCGSI DA +F + + +VSW+ MI G A +G +AL LF+QM++ + PN
Sbjct: 533 VNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNH 592
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+T ++VL AC HAG + + +F LM K++ + P HY+CM D+LGR G+L EA+ V+
Sbjct: 593 ITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVK 652
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
MP ++ A +WG LL A +IH+NIE+G + A L LEP + ++ +ANIYA G WD
Sbjct: 653 EMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDN 712
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA +R MK + VKK PG S + + K TF V D
Sbjct: 713 VAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGD 747
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 213/444 (47%), Gaps = 6/444 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I V + AL L +M + P+ T KACA + + +H
Sbjct: 254 IVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHS 313
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K D FV ++DMY+KC L A +FD MP +DV WN++I G++ G+ +
Sbjct: 314 ALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIE 373
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ LF NM G++ + T+ + ++ ++ + VH+ I G D V N+ +
Sbjct: 374 AMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLD 433
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
+Y KC L+ A VF +V++ S+I + +++L Y M +PD
Sbjct: 434 SYGKCCLLEDAAKVFEVCPA--EDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDA 491
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
SL ++C A QG+ +H H + G DV N+L++MY+KCG ID A +F+
Sbjct: 492 FIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNE 551
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-EL 377
+ R VSW+AMI G AQ G +AL+LF+ M G +P+ +T++S++S C +G + E
Sbjct: 552 ISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEA 611
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCA 436
++F G+ ++D+ + G + +A L +P + + W ++
Sbjct: 612 RRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAAR 671
Query: 437 LNGEFVEALDLFHQMMELDLRPNR 460
++ L M L L P +
Sbjct: 672 IHKNI--ELGRHAAEMLLTLEPEK 693
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 201/451 (44%), Gaps = 48/451 (10%)
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
V++Y+KC A KL + D+ SW+A+I G+ Q G E+ L +Y M L+G + +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 156 VTVMGLTQAAIHAKHLSLLKS--------------------------------------- 176
T + + ++L L K
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 177 -VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
VH + I +G D+D N + YAK + A VF I + +VSWN++I GC
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPK--PDIVSWNAVIAGCVL 266
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+K D +L M P + T+ S L +C + GR +HS + + D V
Sbjct: 267 HEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFV 326
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
LI MYSKCG + AR +FD M + + W ++ISGY+ G EA+ LF M G
Sbjct: 327 GVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGL 386
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
+ T+ +++ S A + + G + + V N+L+D Y KC + DA +
Sbjct: 387 EFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAK 446
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F P + +V++T+MI + G EAL ++ +M + D++P+ F ++ AC +
Sbjct: 447 VFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSA 506
Query: 476 LEKGWGYF------NLMTKVYQVNPELNHYS 500
E+G L++ V+ N +N Y+
Sbjct: 507 YEQGKQIHVHVLKCGLLSDVFAGNSLVNMYA 537
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 42/276 (15%)
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+++YSKC AR L + VSW+A+ISGY Q G +EAL ++ M G +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 360 VTVLSMISGCGQSGALELGKWFDNY-----------------------ACSG-------- 388
T S++ GC + LELGK AC+G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 389 ---------GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G + NAL+DMY+K G A +FY +P+ +VSW +IAGC L+
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ AL L +M + P+ T + L+AC G ++ G + + K+ + P+
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKM-DMEPDSFVG 327
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ D+ + G L++A MP K D +W +++
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSII 362
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 298/552 (53%), Gaps = 13/552 (2%)
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
M+H H++K+ + FV + +V++YAKC + A K+FD +P R+V W ++ G+ Q
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E + +F +M G T+ A + ++L K H+F I + D S+ N
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
S Y+K L + FR E G + V+SW +II C + L + M+++
Sbjct: 121 ALCSLYSKFGSLDSSVKAFR--ETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENV 178
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P+ T+ S+LS C ++ G VHS G + ++ + N+L+ +Y KCG ID A+
Sbjct: 179 EPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKN 238
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDL-----------DEALRLFFAMEAAGEVPDLVTVL 363
LF+ M + ++W AMI+G+AQ DL EAL ++ + +G PDL T+
Sbjct: 239 LFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLS 298
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
S+++ C + ALE G+ G +V+V AL+DMY KCGSI AR+ F + +
Sbjct: 299 SILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
T++SWT+MI A +G+ AL LF M RPN++TF+ VL AC+HAG +++ YF
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYF 418
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
+M K Y++ P ++HY C+ D+ R G+L EA D ++ M ++ + IW L+ C+ H N
Sbjct: 419 EIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN 478
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
E+G Y A +L +L+P S YV + N+Y RW+ V+ +R +MK +V K S +
Sbjct: 479 EELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRIS 538
Query: 604 INGKTCTFTVED 615
I G+ +F +
Sbjct: 539 IKGEVHSFKTNN 550
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 215/473 (45%), Gaps = 24/473 (5%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR N + W + + V ++ A+ +F M ++ P+N T AC+ L
Sbjct: 42 PRRNVVV-------WTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSL 94
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ H I+K D + + +Y+K LD + K F + ++DV SW +I
Sbjct: 95 ESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTII 154
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G L LF M ++ + T+ + + L VHS +G +
Sbjct: 155 SACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHE 214
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG-----DKFD-- 240
+++ + N+ + Y KC + A+ +F +E + +++WN++I G D F
Sbjct: 215 SNLRITNSLVYLYLKCGCIDEAKNLFNRME--YKNLITWNAMIAGHAQAMDLAKDNFSAQ 272
Query: 241 ----DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
++L Y + G +PD+ T+ S+L+ C AL QG +H+ I GF DV V
Sbjct: 273 QTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVG 332
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
L+ MY KCG I+ AR F M RT +SWT+MI+ +A+ G AL+LF M AG
Sbjct: 333 TALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFR 392
Query: 357 PDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ +T + +++ C +G + E ++F+ +K + L+DM+ + G + +A +
Sbjct: 393 PNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFD 452
Query: 416 LFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ + E W +IAGC +G E L + L L+P VL
Sbjct: 453 VIKRMDVEPNEFIWLLLIAGCRNHGN--EELGFYAAEQLLKLKPRSTETYVVL 503
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/517 (36%), Positives = 299/517 (57%), Gaps = 16/517 (3%)
Query: 111 LFDKMPDR-DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LF+K D+ +V SWN++I A+ G + L F +MR + ++ + T ++
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L + H + G + D+ V + + Y+KC +L+ A +F I R +VSW S+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISH--RNIVSWTSM 224
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRP--------DVTTVVSLLSSC--VCPEALVQGRL 279
I G D +L ++ + + D +VS+LS+C V +++ +G
Sbjct: 225 ITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG-- 282
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
VH I GF+ D+ V NTL+ Y+KCG++ +R +FDGM +R +SW ++I+ YAQ G
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGM 342
Query: 340 LDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
E++ +F M GE+ + VT+ +++ C SG+ LGK + GL+ NV V
Sbjct: 343 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGT 402
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
++IDMY KCG + AR+ F + EK V SW+ M+AG ++G EAL++F++M ++P
Sbjct: 403 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 462
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N +TF++VL AC+HAG LE+GW +F M+ + V P + HY CM DLLGR G LKEA D
Sbjct: 463 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDL 522
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
++ M ++ D +WG LL AC++H+N+++GE A +LFEL+P + YV ++NIYA GRW
Sbjct: 523 IKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRW 582
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ V +R +MK + + K PG SLV I G+ F V D
Sbjct: 583 EDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGD 619
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 222/445 (49%), Gaps = 13/445 (2%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+L NK + + WNS I E ++ +AL F M+K ++PN TFP K+C
Sbjct: 103 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 162
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
+ L D + H + F D+FV + +VDMY+KC L A LFD++ R++ SW
Sbjct: 163 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 222
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLV--------GIQADFVTVMGLTQAAIHAKHLSLLKS 176
+MI G+ Q + L LF + + D + ++ + A S+ +
Sbjct: 223 SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH F I G + D+ V NT + AYAKC +L ++ VF G+ E R V+SWNSII
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAE--RDVISWNSIIAVYAQN 340
Query: 237 DKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+S+ + M+ DG + T+ ++L +C + G+ +H I G + +V V
Sbjct: 341 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 400
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
++I MY KCG ++ AR FD M ++ SW+AM++GY G EAL +F+ M AG
Sbjct: 401 GTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGV 460
Query: 356 VPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P+ +T +S+++ C +G LE G WF + ++ V ++D+ + G + +A
Sbjct: 461 KPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAF 520
Query: 415 ELFYALPEKT-VVSWTTMIAGCALN 438
+L + + V W ++ C ++
Sbjct: 521 DLIKGMKLRPDFVVWGALLGACRMH 545
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 312/597 (52%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V ++ +L LF ++ + ++ P+ + AC+ L + IH HI+
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D + ++D Y KC R+ A+KLFD MP++++ SW ++ G+ Q ++ +
Sbjct: 277 RYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAME 336
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M G++ D + + L VH++ I + D V N+ I YA
Sbjct: 337 LFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT-YGDKFD--DSLNFYRHMIYDGFRPDV 258
KC+ L A VF VV +N++I G + G +++ D+LN + M + RP +
Sbjct: 397 KCDCLTEARKVFDIF--AADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSL 454
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T VSLL + +L + +H +G +LD+ + LI++YS C + +R +FD
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDE 514
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + V W +M SGY Q+ + +EAL LF ++ + + PD T + M++ G +L+LG
Sbjct: 515 MKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLG 574
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ F GL+ N + NAL+DMY+KCGS DA + F + + VV W ++I+ A +
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
GE +AL + +MM + PN +TF+ VL AC+HAG +E G F LM + + + PE H
Sbjct: 635 GEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEH 693
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM LLGR G+L EA + ++ MP K A +W +LL C N+E+ EY A +
Sbjct: 694 YVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSD 753
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + + ++NIYA G W +R MK V K PG+S + IN + F +D
Sbjct: 754 PKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKD 810
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 211/406 (51%), Gaps = 8/406 (1%)
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
LY ++HG I+ S D ++ ++++Y++ + A K+F+KMP+R++ +W+ M+
Sbjct: 60 LLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSA 119
Query: 130 FAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGV 186
GF E+ L +F + R + + QA + ++ + SF +
Sbjct: 120 CNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRF 179
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D DV V I Y K ++ A LVF + E ++ V+W ++I GC + SL +
Sbjct: 180 DRDVYVGTLLIDFYLKEGNIDYARLVFDALPE--KSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
++ PD + ++LS+C L G+ +H+H + YG + D S++N LI Y KC
Sbjct: 238 YQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKC 297
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + +A LFDGM ++ +SWT ++SGY Q EA+ LF +M G PD+ S++
Sbjct: 298 GRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSIL 357
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
+ C ALE G Y L ++ V N+LIDMY+KC + +AR++F VV
Sbjct: 358 TSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVV 417
Query: 427 SWTTMIAGCALNG---EFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ MI G + G E +AL++FH M +RP+ +TF+++L+A
Sbjct: 418 LFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 134/273 (49%), Gaps = 9/273 (3%)
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+ L+ +VH I G +LD + N L+++YS+ G + AR +F+ M +R V+W+ M+
Sbjct: 58 DPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMV 117
Query: 332 SGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKW----FDNYAC 386
S G +E+L +F P+ + S I C SG G+W ++
Sbjct: 118 SACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQAC--SGLDGSGRWMVFQLQSFLV 175
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
+V V LID Y K G+I AR +F ALPEK+ V+WTTMI+GC G +L
Sbjct: 176 KSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
LF+Q+ME ++ P+ VL AC+ FLE G + + Y + + + + D
Sbjct: 236 LFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGHEKDASLMNVLIDSY 294
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
+ G+++ A MP K+ W TLL K
Sbjct: 295 VKCGRVRAAHKLFDGMPNKNIIS-WTTLLSGYK 326
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 316/577 (54%), Gaps = 25/577 (4%)
Query: 42 FRRMKKNDIEP-NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
+ M+ ND +N P + KACA+ S + +HG K+ F SD+FV +++MY
Sbjct: 75 YLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYE 134
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
KC L A +FD+MP+RDV SW M+ + + + L L M+ VG++ V ++
Sbjct: 135 KCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALIS 194
Query: 161 LTQAAIHAKHLSLLKSVHSFGI-HIGVDA-DVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
L + + ++VH + + ++G + +VS+ I Y K L A+ +F + +
Sbjct: 195 LIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSK 254
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R+VVSW +I GC + D+ + M+ + P+ T++SL++ C L G+
Sbjct: 255 --RSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGK 312
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
H++ + GF + ++++ LI MY KCG + AR LF+G+ + W+ +IS YA
Sbjct: 313 WFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVS 372
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+D+ LF M P+ VT++S++S C ++GAL+LGKW Y GL+ +V++
Sbjct: 373 CMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILET 432
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
ALI+MY+KCG + AR LF ++ + W TM+AG +++G EAL+LF +M + P
Sbjct: 433 ALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEP 492
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N +TF+++ AC+H+G +E HY C+ DLLGR G L EA +
Sbjct: 493 NDITFVSIFHACSHSGLME--------------------HYGCLVDLLGRAGHLDEAHNI 532
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+++MP++ + IWG LL ACK+H+N+ +GE A ++ EL+P + V +NIYA RW
Sbjct: 533 IENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW 592
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ V ++R M + +KK PG S + ++G F D
Sbjct: 593 NDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGD 629
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 148/333 (44%), Gaps = 26/333 (7%)
Query: 2 AASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA 61
+A L RL+K ++ W I + + F RM + + PN +T +
Sbjct: 244 SAQRLFDRLSK----RSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLI 299
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
C + + H +++++ F + + T ++DMY KC ++ A LF+ + +DV
Sbjct: 300 TECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVK 359
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
W+ +I +A + +++V LF M ++ + VT++ L A L L K H++
Sbjct: 360 IWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYI 419
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
G++ DV + I+ YAKC D+ +A +F E R + WN+++ G + +
Sbjct: 420 NRHGLEVDVILETALINMYAKCGDVTIARSLFN--EAMQRDIRMWNTMMAGFSMHGCGKE 477
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+L + M G P+ T VS+ +C L++ HYG L+
Sbjct: 478 ALELFSEMESHGVEPNDITFVSIFHAC-SHSGLME---------HYG---------CLVD 518
Query: 302 MYSKCGDIDSARFLFDGMCDR-TRVSWTAMISG 333
+ + G +D A + + M R + W A+++
Sbjct: 519 LLGRAGHLDEAHNIIENMPMRPNTIIWGALLAA 551
>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 326/640 (50%), Gaps = 57/640 (8%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC---AKLSDFLYS-- 73
I+ ++S + + ++ A + FRR+ +++++P++LTF + KA A S + S
Sbjct: 113 ISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSPN 172
Query: 74 -----QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
I H+ KS F +++ T +D Y K + A LF++MP RDV SWNA+I
Sbjct: 173 TKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALIC 232
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+++ G+ L +F M G T++GL + + K++H FGI G+D
Sbjct: 233 GYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDL 292
Query: 189 DVSVCNTWISAYAK---------------------------------------------C 203
D V N S YAK C
Sbjct: 293 DCRVKNALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAGC 352
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
+++ A L++ + + R +VS ++I G + + M+ +PD +VS
Sbjct: 353 GNIESAGLLYNLMPQ--RNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVS 410
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+L P + G +H++G+ G D V+N LISMYSK GDI++ LF M ++
Sbjct: 411 ILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQ 470
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
+SW ++IS Q G +A+ LF M G PD +T+ S+++GC + G L+ G+ N
Sbjct: 471 LISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHN 530
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
Y L + AL+DMY KCG + A +F ++ E + +W TMI+G L+G
Sbjct: 531 YVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHR 590
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
AL + +M E L+P+R+TFL VL ACTH G + +G YF M + + + P L H +CM
Sbjct: 591 ALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMV 650
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAA 563
DLL R G L+EA+ FV++M ++ D+ IWG LL +C IH+ +++GE +A RL L+ +S
Sbjct: 651 DLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGG 710
Query: 564 PYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
YV M+N+YA GRWD VA +R MMK G SL+
Sbjct: 711 LYVLMSNLYASKGRWDDVARVRKMMKDTGGDGSSGISLIE 750
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/599 (32%), Positives = 318/599 (53%), Gaps = 9/599 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + A+ LF M ++ P+ AC++L D + +H +
Sbjct: 116 WAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAI 175
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K SD+ VQ +V MY+K + + LF+++ D+D+ SW ++I G AQ G L
Sbjct: 176 KWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQ 235
Query: 142 LFYNMRLVGI----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+F M G+ + F +V +++ L + +H + +D + +
Sbjct: 236 IFREMIAEGVHHPNEFHFGSVFRACSVVVNS--LEYGEQIHGVSVKYQLDRNSYAGCSLS 293
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YA+CN+L A VF IE +VSWNS+I + +++ + M G RPD
Sbjct: 294 DMYARCNELDSARKVFYRIES--PDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPD 351
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
TV++LL +CV +AL QGR +HS+ + G DV V N+L+SMY++C D SA +F
Sbjct: 352 GITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFH 411
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
DR V+W ++++ Q L++ +LF + + D +++ +++S + G E+
Sbjct: 412 ETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEM 471
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCA 436
K YA GL + M+ N LID Y+KCGS+ DA +LF + + V SW+++I G A
Sbjct: 472 VKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYA 531
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
G EALDLF +M L ++PN VTF+ VL AC+ G +++G Y+++M Y + P
Sbjct: 532 QFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTR 591
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
H SC+ DLL R G+L EA FV MP + D +W TLL A + H ++++G+ A +
Sbjct: 592 EHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLN 651
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++P +A YV + NIYA G W+ A L+ M+ + V+K PG+S + + G+ F VED
Sbjct: 652 IDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVED 710
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 217/479 (45%), Gaps = 10/479 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT-----MVDMYAKCDRLDCAYKLFDKMPDR 118
C++L +++H H++ S T ++ MY +C D A +FD M DR
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+ SW A+I AQ + LF +M G D + A L L + VH
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ I +D+ V N ++ Y+K + +F I + + ++SW SII G +
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRD--KDLISWGSIIAGLAQQGR 229
Query: 239 FDDSLNFYRHMIYDGF-RPDVTTVVSLLSSC-VCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D+L +R MI +G P+ S+ +C V +L G +H + Y D +
Sbjct: 230 EMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAG 289
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+L MY++C ++DSAR +F + VSW ++I+ ++ KG L EA+ LF M +G
Sbjct: 290 CSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLR 349
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
PD +TV++++ C AL G+ +Y GL +V+V N+L+ MY++C A ++
Sbjct: 350 PDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDV 409
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F+ ++ VV+W +++ C + + LF + +R++ VL A G+
Sbjct: 410 FHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYF 469
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
E KV V + + + D + G L +A + M D W +L+
Sbjct: 470 EMVKQVHAYAFKVGLVGDAMLS-NGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLI 527
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 182/389 (46%), Gaps = 33/389 (8%)
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N I+ Y +C A +VF G+ + R VSW ++I + D++ + M+
Sbjct: 84 LSNHLITMYGRCGAPDSARVVFDGMLD--RNPVSWAAVIAAHAQNSRCADAMGLFSSMLR 141
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G PD + S + +C L GR VH+ I + D+ V N L++MYSK G +
Sbjct: 142 SGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGD 201
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGCG 370
LF+ + D+ +SW ++I+G AQ+G +AL++F M A G P+ S+ C
Sbjct: 202 GFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACS 261
Query: 371 -QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+LE G+ + L N +L DMY++C + AR++FY + +VSW
Sbjct: 262 VVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWN 321
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK- 488
++I + G EA+ LF +M + LRP+ +T +A+L AC L +G + + K
Sbjct: 322 SLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKL 381
Query: 489 -----VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI-----KSDAGIWGTLLCAC 538
V N L+ Y+ LDF +M + D W ++L AC
Sbjct: 382 GLGGDVIVSNSLLSMYA-------------RCLDFSSAMDVFHETHDRDVVTWNSILTAC 428
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
H+++E ++LF L H + P ++
Sbjct: 429 VQHQHLED----VFKLFSL-LHRSMPSLD 452
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 155/328 (47%), Gaps = 46/328 (14%)
Query: 268 CVCPEALVQGRLVHSHGIHYG-----FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
C +L QGRLVH H + + + N LI+MY +CG DSAR +FDGM DR
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSW A+I+ +AQ +A+ LF +M +G +PD + S I C + G L LG+
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A +++V NAL+ MYSK GS+GD LF + +K ++SW ++IAG A G +
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREM 231
Query: 443 EALDLFHQMMELDL-RPNRVTFLAVLQACT-HAGFLEKGWGYFNLMTKVYQVN------- 493
+AL +F +M+ + PN F +V +AC+ LE G + K YQ++
Sbjct: 232 DALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVK-YQLDRNSYAGC 290
Query: 494 ------------------------PELNHYSCMADLLGRKGKLKEALDFVQSMP---IKS 526
P+L ++ + + KG L EA+ M ++
Sbjct: 291 SLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRP 350
Query: 527 DAGIWGTLLCAC----KIHRNIEIGEYV 550
D LLCAC +H+ I Y+
Sbjct: 351 DGITVMALLCACVGYDALHQGRSIHSYL 378
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
S + WNS I K +A++LF M+ + + P+ +T + AC +
Sbjct: 313 ESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGR 372
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++VK D+ V +++ MYA+C A +F + DRDV +WN+++ Q
Sbjct: 373 SIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQ 432
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
LE V LF + D +++ + A+ + ++K VH++ +G+ D + N
Sbjct: 433 HLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSN 492
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I YAKC L A +F + G R V SW+S+I G ++L+ + M G
Sbjct: 493 GLIDTYAKCGSLDDANKLFEIMGTG-RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGV 551
Query: 255 RPDVTTVVSLLSSC 268
+P+ T V +L++C
Sbjct: 552 KPNHVTFVGVLTAC 565
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/580 (35%), Positives = 307/580 (52%), Gaps = 5/580 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL L+ RM + P+ TFP + + C + D+ + +H H+++ F ++ V +V
Sbjct: 180 EALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALV 239
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MYAKC + A K+FD M D SWNAMI G + E L LF M +Q + +
Sbjct: 240 TMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLM 299
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ +T A+ + K +H F + G DV+ CN+ I Y + A +F +
Sbjct: 300 TITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM 359
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E + +SW ++I G D +L Y M PD T+ S L++C C L
Sbjct: 360 ET--KDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDV 417
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G +H + GF V V N L+ MY+K ID A +F M ++ VSW++MI+G+
Sbjct: 418 GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCF 477
Query: 337 KGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
EAL F M G V P+ VT ++ +S C +GAL GK Y G+
Sbjct: 478 NHRSFEALYYFRYM--LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGY 535
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V NAL+D+Y KCG A F EK VVSW M++G +G AL LF+QM+E+
Sbjct: 536 VPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMG 595
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
P+ VTF+A+L AC+ AG + +GW F++MT+ + + P L HY+CM DLL R GKL EA
Sbjct: 596 EHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEA 655
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
+ + MPIK DA +WG LL C+IHR++E+GE A + ELEP+ A +V + ++Y
Sbjct: 656 YNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDA 715
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
G+W VA +R M+ +++ G S V + G T F +D
Sbjct: 716 GKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDD 755
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 206/387 (53%), Gaps = 3/387 (0%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
M+ M + + A+++F KMP+RDV SWN M+ G+ ++GFLE+ L L+Y M G++
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T + + + + VH+ + G +V V N ++ YAKC D+ A V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F G+ + +SWN++I G + + L + M+ + +P++ T+ S+ +
Sbjct: 255 FDGM--AVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+ + +H + GF +DV+ N+LI MY+ G + A +F M + +SWTAMIS
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY + G D+AL ++ ME PD VT+ S ++ C G L++G A + G
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
V+V NAL++MY+K I A E+F + EK VVSW++MIAG N EAL F M+
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKG 479
++PN VTF+A L AC G L G
Sbjct: 493 G-HVKPNSVTFIAALSACAATGALRSG 518
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 114/232 (49%), Gaps = 7/232 (3%)
Query: 256 PDVTTVVSLLSSCVCPEALVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD V+L C A+ G + H F L + N ++SM + G+I A
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLG--NAMLSMLVRFGEIWHAW 151
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F M +R SW M+ GY + G L+EAL L++ M AG PD+ T ++ CG
Sbjct: 152 RVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIP 211
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+G+ + G D V V NAL+ MY+KCG I AR++F + +SW MIA
Sbjct: 212 DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIA 271
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC---THAGFLEKGWGY 482
G N E L+LF M+E +++PN +T +V A + GF ++ G+
Sbjct: 272 GHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGF 323
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
++ + WN + V AL LF +M + P+ +TF + AC++ +
Sbjct: 559 VHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQ 618
Query: 73 S-QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVG 129
++ H K ++ MVD+ ++ +L AY L ++MP + D A W A++ G
Sbjct: 619 GWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 315/595 (52%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + + + F M+ + I PN +TF + CA +HG +V
Sbjct: 203 WNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 262
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S + ++ +++ MY+KC R D A KLF M D +WN MI G+ Q G +E+ L
Sbjct: 263 VSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLI 322
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
FY M G+ D +T L + ++L + +H + + + D+ + + I AY
Sbjct: 323 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYF 382
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + MA+ +F VV + ++I G + D+L +R ++ P+ T+
Sbjct: 383 KCRGVSMAQKIFSQCNS--VDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITL 440
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS+L AL GR +H I GFD ++ +I MY+KCG ++ A +F +
Sbjct: 441 VSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSK 500
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW +MI+ AQ + A+ +F M +G D V++ + +S C + GK
Sbjct: 501 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAI 560
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ L +V + LIDMY+KCG++ A +F + EK +VSW ++IA +G+
Sbjct: 561 HGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKL 620
Query: 442 VEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
++L LFH+M+E RP+++TFL ++ C H G +++G +F MT+ Y + P+ HY+
Sbjct: 621 KDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYA 680
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DL GR G+L EA + V+SMP DAG+WGTLL A ++H+N+E+ + + RL +L+P
Sbjct: 681 CVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPW 740
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ YV ++N +A G W+ V +R++MK +V+K PG S + IN T F D
Sbjct: 741 NSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGD 795
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 254/531 (47%), Gaps = 4/531 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R S+I WNS I V ++AL + +M + P+ TFP + KAC L +F +
Sbjct: 95 RLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIE 154
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ + + FV ++++ Y + ++D A KLFD++ +D WN M+ G+A+ G
Sbjct: 155 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCG 214
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ V+ F MR+ I + VT + + L +H + G+D + S+ N
Sbjct: 215 ASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKN 274
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ +S Y+KC A +FR + V+WN +I G ++SL F+ MI G
Sbjct: 275 SLLSMYSKCGRFDDAIKLFRMMSRA--DTVTWNCMISGYVQSGLMEESLIFFYEMISSGV 332
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T SLL S E L R +H + + + LD+ + + LI Y KC + A+
Sbjct: 333 LPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQK 392
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F V +TAMISGY G +AL +F + P+ +T++S++ G A
Sbjct: 393 IFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLA 452
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LG+ + G + + A+IDMY+KCG + A E+F L ++ +VSW +MI
Sbjct: 453 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITR 512
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
CA + A+D+F QM + + V+ A L AC + G M K + +
Sbjct: 513 CAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIK-HSLAL 571
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ S + D+ + G LK A++ +M K+ W +++ A H ++
Sbjct: 572 DVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVS-WNSIIAAYGNHGKLK 621
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 228/489 (46%), Gaps = 8/489 (1%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P L+ + + C+ L+ + +H ++ + D + ++ MYA C K+
Sbjct: 31 PRRLSL--LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKM 88
Query: 112 FDKMPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
F ++ R + WN++I F +MG L + L ++ M G+ D T L +A + K
Sbjct: 89 FYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK 148
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ ++ + +G+D + V ++ I AY + + +A +F + + + V WN +
Sbjct: 149 NFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQ--KDCVIWNVM 206
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
+ G D + + M D P+ T +LS C + G +H + G
Sbjct: 207 LNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGL 266
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D + S+ N+L+SMYSKCG D A LF M V+W MISGY Q G ++E+L F+
Sbjct: 267 DFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYE 326
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M ++G +PD +T S++ + LE + Y + ++ + +ALID Y KC
Sbjct: 327 MISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRG 386
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ A+++F VV +T MI+G NG ++AL++F ++++ + PN +T +++L
Sbjct: 387 VSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPV 446
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
L+ G + K + N + D+ + G++ A + + K D
Sbjct: 447 IGGLLALKLGRELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLS-KRDIV 504
Query: 530 IWGTLLCAC 538
W +++ C
Sbjct: 505 SWNSMITRC 513
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I + A+ +FR+M + I + ++ ACA L + + IHG
Sbjct: 503 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHG 562
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K D++ ++T++DMYAKC L A +FD M ++++ SWN++I + G L+
Sbjct: 563 FMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKD 622
Query: 139 VLCLFYNM-RLVGIQADFVTVMGLTQAAIH 167
LCLF+ M G + D +T + + H
Sbjct: 623 SLCLFHEMVEKSGNRPDQITFLEIISLCCH 652
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/531 (36%), Positives = 297/531 (55%), Gaps = 6/531 (1%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
++F T++ YAK ++ A++LFD+MP D S+N +I +A+ G + LF MR
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+ D T+ G+ A ++ L++ +H+ + G+D+ VSV N I++Y+K LK
Sbjct: 133 EAFLDMDGFTLSGIITAC--GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A +F + E R VSWNS++ + +L Y M G D+ T+ S+L++
Sbjct: 191 EARRIFHWLSED-RDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRVS 326
+ L+ G H+ I G+ + V + LI +YSKCG + R +FD + + V
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309
Query: 327 WTAMISGYAQKGDL-DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W MISGY+ DL DEAL F ++ G PD +++ +IS C + G+ A
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369
Query: 386 CSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
+ N + V NALI MYSKCG++ DA+ LF +PE VS+ +MIAG A +G ++
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L LF +M+E+D P +TF++VL AC H G +E G YFN+M + + + PE H+SCM D
Sbjct: 430 LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMID 489
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
LLGR GKL EA ++++P W LL AC+IH N+E+ A RL +L+P +AAP
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP 549
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV +ANIY+ GR A++R +M+ VKK PG S + +N + F ED
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAED 600
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 159/330 (48%), Gaps = 9/330 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + E KAL L+ M + + T + A + D L H ++
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLI 267
Query: 82 KSPFWSDIFVQTTMVDMYAKCD--RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL-EK 138
KS + + V + ++D+Y+KC LDC K+FD++ + D+ WN MI G++ L ++
Sbjct: 268 KSGYHQNSHVGSGLIDLYSKCGGCMLDCR-KVFDEISNPDLVLWNTMISGYSLYEDLSDE 326
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 197
L F ++ VG + D +++ + A + S + VH + + + ++ +SV N I
Sbjct: 327 ALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALI 386
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y+KC +L+ A+ +F + E VS+NS+I G SL+ ++ M+ F P
Sbjct: 387 AMYSKCGNLRDAKTLFDTMPE--HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPT 444
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHS-HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T +S+L++C + G++ + +G + + + +I + + G + A L
Sbjct: 445 NITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLI 504
Query: 317 DGMC-DRTRVSWTAMISGYAQKGDLDEALR 345
+ + D W+A++ G+++ A++
Sbjct: 505 ETIPFDPGFFXWSALLGACRIHGNVELAIK 534
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D +V NTLIS Y+K ++ A LFD M VS+ +I+ YA++GD A +LF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M A D T+ +I+ CG + + L + + GL V V NALI YSK G
Sbjct: 131 MREAFLDMDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 410 IGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ +AR +F+ L E + VSW +M+ + E +AL+L+ +M L + T +VL
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 469 ACTHAGFLEKGWGYF-NLMTKVYQVNPELNHYSCMADLLGRKG----KLKEALDFVQSMP 523
A T+ L G + L+ Y N + S + DL + G ++ D + +
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVG--SGLIDLYSKCGGCMLDCRKVFDEISN-- 304
Query: 524 IKSDAGIWGTLLCACKIHRNI 544
D +W T++ ++ ++
Sbjct: 305 --PDLVLWNTMISGYSLYEDL 323
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/580 (35%), Positives = 307/580 (52%), Gaps = 5/580 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL L+ RM + P+ TFP + + C + D+ + +H H+++ F ++ V +V
Sbjct: 180 EALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALV 239
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MYAKC + A K+FD M D SWNAMI G + E L LF M +Q + +
Sbjct: 240 TMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLM 299
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ +T A+ + K +H F + G DV+ CN+ I Y + A +F +
Sbjct: 300 TITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM 359
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E + +SW ++I G D +L Y M PD T+ S L++C C L
Sbjct: 360 ET--KDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDV 417
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G +H + GF V V N L+ MY+K ID A +F M ++ VSW++MI+G+
Sbjct: 418 GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCF 477
Query: 337 KGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
EAL F M G V P+ VT ++ +S C +GAL GK Y G+
Sbjct: 478 NHRSFEALYYFRYM--LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGY 535
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V NAL+D+Y KCG A F EK VVSW M++G +G AL LF+QM+E+
Sbjct: 536 VPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMG 595
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
P+ VTF+A+L AC+ AG + +GW F++MT+ + + P L HY+CM DLL R GKL EA
Sbjct: 596 EHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEA 655
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
+ + MPIK DA +WG LL C+IHR++E+GE A + ELEP+ A +V + ++Y
Sbjct: 656 YNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDA 715
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
G+W VA +R M+ +++ G S V + G T F +D
Sbjct: 716 GKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDD 755
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 206/387 (53%), Gaps = 3/387 (0%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
M+ M + + A+++F KMP+RDV SWN M+ G+ ++GFLE+ L L+Y M G++
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T + + + + VH+ + G +V V N ++ YAKC D+ A V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F G+ + +SWN++I G + + L + M+ + +P++ T+ S+ +
Sbjct: 255 FDGM--AVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+ + +H + GF +DV+ N+LI MY+ G + A +F M + +SWTAMIS
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY + G D+AL ++ ME PD VT+ S ++ C G L++G A + G
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
V+V NAL++MY+K I A E+F + EK VVSW++MIAG N EAL F M+
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKG 479
++PN VTF+A L AC G L G
Sbjct: 493 G-HVKPNSVTFIAALSACAATGALRSG 518
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 114/232 (49%), Gaps = 7/232 (3%)
Query: 256 PDVTTVVSLLSSCVCPEALVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD V+L C A+ G + H F L + N ++SM + G+I A
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLG--NAMLSMLVRFGEIWHAW 151
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F M +R SW M+ GY + G L+EAL L++ M AG PD+ T ++ CG
Sbjct: 152 RVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIP 211
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+G+ + G D V V NAL+ MY+KCG I AR++F + +SW MIA
Sbjct: 212 DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIA 271
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC---THAGFLEKGWGY 482
G N E L+LF M+E +++PN +T +V A + GF ++ G+
Sbjct: 272 GHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGF 323
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
++ + WN + V AL LF +M + P+ +TF + AC++ +
Sbjct: 559 VHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQ 618
Query: 73 S-QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVG 129
++ H K ++ MVD+ ++ +L AY L ++MP + D A W A++ G
Sbjct: 619 GWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/518 (37%), Positives = 296/518 (57%), Gaps = 17/518 (3%)
Query: 111 LFDKMPDR-DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LF+K DR DV SWN++I A+ G + L F MR + I+ + T ++
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L+ K H + G ++D+ V + I Y+KC L A ++F I R +V+W S+
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPR--RNIVTWTSL 154
Query: 230 IGGCTYGDKFDDSLNFYRHMIYD---------GFRPDVTTVVSLLSSC--VCPEALVQGR 278
I G D ++L ++ +++ G D ++S+LS+C V +A+ +G
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG- 213
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH I G D + V NTL+ Y+KCG++ +R +FD M ++ VSW +MI+ YAQ G
Sbjct: 214 -VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNG 272
Query: 339 DLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
+A +F M +A G + VT+ +++ C GAL +G + G +NV++
Sbjct: 273 LSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMA 332
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
++IDMY KCG AR F + EK V SWT MIAG ++G EALD+F+QM+ ++
Sbjct: 333 TSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVK 392
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN +TF++VL AC+HAGFLE+GW +FN M+ Y V P + HY CM DLLGR G +KEA +
Sbjct: 393 PNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYN 452
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
++SM ++ D +WG+LL AC+IH+++E+ E A LF+L+P + YV +ANIYA GR
Sbjct: 453 LIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGR 512
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W V +R ++K + K PG SLV + G+ F V D
Sbjct: 513 WKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGD 550
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 239/464 (51%), Gaps = 14/464 (3%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
++L NK + + + WNS I E ++ ++L F M+K DI+PN TFP K+
Sbjct: 32 TNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKS 91
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C+ L D + H + F SD+FV + ++DMY+KC +L A LFD++P R++ +W
Sbjct: 92 CSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151
Query: 124 NAMIVGFAQMGFLEKVLCLFY---------NMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
++I G+ Q + L +F N VG D V ++ + A + ++
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+ VH I +G+D + V NT + AYAKC ++ ++ VF + E + VVSWNS+I
Sbjct: 212 EGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE--KDVVSWNSMIAVYA 269
Query: 235 YGDKFDDSLNFYRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
D+ + M+ G + + T+ +LL +C AL G +H I G+ +V
Sbjct: 270 QNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNV 329
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ ++I MY KCG + AR FDGM ++ SWTAMI+GY G EAL +F+ M A
Sbjct: 330 IMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA 389
Query: 354 GEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G P+ +T +S+++ C +G LE G +WF+ + ++ V ++D+ + G I +
Sbjct: 390 GVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKE 449
Query: 413 ARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
A L ++ + V W +++A C ++ + A ++ +LD
Sbjct: 450 AYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLD 493
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 322/608 (52%), Gaps = 5/608 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALL--LFRRMKKNDIEPNNLTFPFIAKACAKL 67
++I+ I+ WN I + + + LF+RM+ ++I PN TF I A + L
Sbjct: 66 FDRIHNKDVIS-WNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNL 124
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
S + Q H +K + D+FV +++++MY K L A ++FD+MP+R+ +W MI
Sbjct: 125 SSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMI 184
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+A + +F MR + + A + + K +H + G+
Sbjct: 185 SGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLL 244
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+S+ N ++ YAKC L + VF + + ++W+++I G +L +
Sbjct: 245 VFLSILNALVTMYAKCGSLDDSLQVFEMSND--KNSITWSAMITGYAQSGDSHKALKLFS 302
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M + G P T+V +L++C A+ +G+ VH++ + GF+ + ++ L+ MY+K G
Sbjct: 303 RMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSG 362
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+ AR F+ + V WT+MI+GY Q G+ ++AL L+ M+ G +P+ +T+ S++
Sbjct: 363 VTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLK 422
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C A + G+ GL V + +AL MY+KCG++ + +F +PE+ ++S
Sbjct: 423 ACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIIS 482
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W MI+G + NG EAL+LF +M + D +P+ VTF+ VL AC+H G ++ GW YF +M
Sbjct: 483 WNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMF 542
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ + P++ HY+CM D+L R GKL EA +F++S I +W LL AC+ +RN E+G
Sbjct: 543 DEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELG 602
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
Y +L EL ++ YV ++ IY GR + V +R+MMK V K PG S + +
Sbjct: 603 AYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSN 662
Query: 608 TCTFTVED 615
F V D
Sbjct: 663 VHVFVVGD 670
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 241/463 (52%), Gaps = 7/463 (1%)
Query: 76 IHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H I+K S I++ ++++ YAKC L A +FD++ ++DV SWN +I G++Q G
Sbjct: 29 LHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQG 88
Query: 135 FLEK--VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
V+ LF MR I + T G+ AA + + + H+ I + DV V
Sbjct: 89 PTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFV 148
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
++ ++ Y K L A VF + E R V+W ++I G ++ + M +
Sbjct: 149 GSSLLNMYCKAGLLFEAREVFDRMPE--RNEVTWATMISGYAIQRLAGEAFEVFELMRRE 206
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+ S+LS+ PE + G+ +H + G + +S++N L++MY+KCG +D +
Sbjct: 207 EEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDS 266
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F+ D+ ++W+AMI+GYAQ GD +AL+LF M AG P T++ +++ C +
Sbjct: 267 LQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDA 326
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
A+E GK NY G + + + AL+DMY+K G DAR+ F L + +V WT+MI
Sbjct: 327 CAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMI 386
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
AG NGE +AL L+ +M + PN +T +VL+AC++ ++G + T Y +
Sbjct: 387 AGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGR-QIHARTIKYGL 445
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
E+ S ++ + + G L+E + MP + D W ++
Sbjct: 446 GLEVTIGSALSTMYAKCGNLEEGNIVFRRMP-ERDIISWNAMI 487
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 314/575 (54%), Gaps = 8/575 (1%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF--VQTTMVDMYAKC 102
M + P+ T+PF+ ++C+ S+ + + IHG++VK F D+F V T + +MY +C
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGF--DLFDVVATALAEMYEEC 58
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
+ A++LFDK +D+ +++ Q E + +F M + D T L
Sbjct: 59 IEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLL 118
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
+ + L K VH I + D+ V +S Y+K L A +F + E R
Sbjct: 119 RFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRV 178
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V WN +I K + L ++ M G R D+ T + ++SS + + G+ H+
Sbjct: 179 V--WNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHA 236
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
H + G D VSV N+LI MY +C +DSA +F+ M D++ +SW+AMI GY + G
Sbjct: 237 HILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLT 296
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
AL LF M++ G D V +++++ GALE K+ Y+ GL + AL+
Sbjct: 297 ALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLI 356
Query: 403 MYSKCGSIGDARELFY--ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
Y+KCGSI A+ LF + +K ++ W +MI+ A +G++ + L+++M + +P++
Sbjct: 357 TYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQ 416
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VTFL +L AC ++G +EKG +F MT+ Y P HY+CM +LLGR G + EA + V+
Sbjct: 417 VTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVK 476
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
+MPIK DA +WG LL ACK+H ++ E+ A +L +EP +A Y+ ++NIYA G+WDG
Sbjct: 477 NMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDG 536
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA +R+ ++ +KK PG S + ING F V D
Sbjct: 537 VAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVAD 571
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 213/422 (50%), Gaps = 7/422 (1%)
Query: 22 WNSQIREAVDKNEAHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W S + +N+ + + +F RM + P++ TF + + A L+ ++++H
Sbjct: 78 WPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIA 137
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ S D+ V T ++ +Y+K L A KLFDKMP++D WN MI +A+ G + L
Sbjct: 138 IVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECL 197
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF +M GI++D T + + + K + K H+ + G D+ VSV N+ I Y
Sbjct: 198 ELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMY 257
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C L A +F + + ++V+SW+++I G + +L+ + M DG + D
Sbjct: 258 CECKILDSACKIFNWMTD--KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVI 315
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF--DG 318
++++L + V AL + +H + + G S+ L+ Y+KCG I+ A+ LF +
Sbjct: 316 MINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEK 375
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ D+ + W +MIS +A GD + +L+ M+ + PD VT L +++ C SG +E G
Sbjct: 376 IDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKG 435
Query: 379 K-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCA 436
K +F S G + + ++++ + G I +A EL +P K W +++ C
Sbjct: 436 KEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACK 495
Query: 437 LN 438
++
Sbjct: 496 MH 497
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W++ I+ V ++ AL LF +MK + I+ + + I A + + +H
Sbjct: 277 SVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLH 336
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF--DKMPDRDVASWNAMIVGFAQMGF 135
G+ +K S + T ++ YAKC ++ A +LF +K+ D+D+ WN+MI A G
Sbjct: 337 GYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGD 396
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L+ M+ + D VT +GL A +++
Sbjct: 397 WSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNS 429
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 324/591 (54%), Gaps = 6/591 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + ++ E KAL +F+ M + +EP+ +T + + CA+L ++ +HG I
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D + +++ MY+KC L + ++F+K+ ++ SW AMI + + F EK L
Sbjct: 230 RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 289
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV-SVCNTWISAY 200
F M GI+ + VT+ + + + KSVH F + +D + S+ + Y
Sbjct: 290 SFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A+C L E V R + + R +V+WNS+I + +L +R M+ +PD T
Sbjct: 350 AECGKLSDCETVLRVVSD--RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S +S+C + G+ +H H I D V N+LI MYSK G +DSA +F+ +
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R+ V+W +M+ G++Q G+ EA+ LF M + + VT L++I C G+LE GKW
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ GLKD + ALIDMY+KCG + A +F A+ +++VSW++MI ++G
Sbjct: 527 VHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGR 585
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
A+ F+QM+E +PN V F+ VL AC H+G +E+G YFNLM K + V+P H++
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFA 644
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C DLL R G LKEA ++ MP +DA +WG+L+ C+IH+ ++I + + L ++
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTD 704
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
Y ++NIYA G W+ LR+ MK + +KK PG S + I+ K F
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRF 755
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 253/488 (51%), Gaps = 9/488 (1%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSPFWSDIFVQTTMV 96
A+ L+ R+ + + FP + +ACA + L +HG I+K D ++T+++
Sbjct: 84 AIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLL 143
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY + L A K+FD MP RD+ +W+ ++ + G + K L +F M G++ D V
Sbjct: 144 CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAV 203
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + + L + +SVH D D ++CN+ ++ Y+KC DL +E +F I
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI 263
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ + VSW ++I G+ + +L + MI G P++ T+ S+LSSC + +
Sbjct: 264 AK--KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIRE 321
Query: 277 GRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G+ VH + D + ++ L+ +Y++CG + + + DR V+W ++IS YA
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+G + +AL LF M PD T+ S IS C +G + LGK + + D
Sbjct: 382 HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-F 440
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V N+LIDMYSK GS+ A +F + ++VV+W +M+ G + NG VEA+ LF M
Sbjct: 441 VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY 500
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
L N VTFLAV+QAC+ G LEKG W + L+ + +L + + D+ + G L
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK---DLFTDTALIDMYAKCGDLNA 557
Query: 515 ALDFVQSM 522
A ++M
Sbjct: 558 AETVFRAM 565
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 251/517 (48%), Gaps = 18/517 (3%)
Query: 62 KACAKLSDFLYSQMIHGHI-VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
++C+ L L SQ+ H H+ V D T +++ YA D + +F+ P D
Sbjct: 9 RSCSSLR--LVSQL-HAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDS 65
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHS 179
+ +I L+ + L++ + Q + FV L A +HLS+ VH
Sbjct: 66 FMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHG 125
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
I GVD D + + + Y + +L AE VF G+ +R +V+W++++ C +
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP--VRDLVAWSTLVSSCLENGEV 183
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+L ++ M+ DG PD T++S++ C L R VH FDLD ++ N+L
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
++MYSKCGD+ S+ +F+ + + VSWTAMIS Y + ++ALR F M +G P+L
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN-ALIDMYSKCGSIGDARELFY 418
VT+ S++S CG G + GK +A L N + AL+++Y++CG + D +
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ ++ +V+W ++I+ A G ++AL LF QM+ ++P+ T + + AC +AG +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G + + V+ E S + D+ + G + A + +S W ++LC
Sbjct: 424 GKQIHGHVIRT-DVSDEFVQNS-LIDMYSKSGSVDSASTVFNQIKHRS-VVTWNSMLCGF 480
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
+ N A LF+ HS Y+EM + L
Sbjct: 481 SQNGN----SVEAISLFDYMYHS---YLEMNEVTFLA 510
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 7/337 (2%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
++ I WNS I + +AL LFR+M I+P+ T AC
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IHGH++++ SD FVQ +++DMY+K +D A +F+++ R V +WN+M+ GF+
Sbjct: 423 LGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q G + + LF M ++ + VT + + QA L K VH I G+ D+
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLF 540
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
I YAKC DL AE VFR + R++VSW+S+I + +++ + M+
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMS--SRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G +P+ +++LS+C ++ +G+ + +G + I + S+ GD+
Sbjct: 599 SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 658
Query: 312 ARFLFDGMCDRTRVS-WTAMISG--YAQKGDLDEALR 345
A M S W ++++G QK D+ +A++
Sbjct: 659 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK 695
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/533 (36%), Positives = 294/533 (55%), Gaps = 8/533 (1%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
++F +V YAK ++ A +LFD+ P D S+N +I G+A + LF MR
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMR 132
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+G + D T+ GL A + L+K +H F + G D+ SV N +++ Y+K L+
Sbjct: 133 ELGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A VF G++ GLR VSWNS+I + +L Y+ MI+ GF+ D+ T+ S+L++
Sbjct: 191 EAVSVFYGMD-GLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS---ARFLFDGMCDRTR 324
+ L+ GR H I GF + V + LI YSKCG D + +F +
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDL 309
Query: 325 VSWTAMISGYAQKGD-LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
V W MISGY+ + +EA++ F M+ G PD + + + S C + GK
Sbjct: 310 VLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHG 369
Query: 384 YACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A + N + V NALI +Y K G++ DAR +F +PE VS+ MI G A +G
Sbjct: 370 LAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
EAL L+ +M++ + PN +TF+A+L AC H G +++G YFN M + +++ PE HYSCM
Sbjct: 430 EALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCM 489
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
DLLGR GKL+EA F+ +MP K + W LL AC+ H+N+ + E A L ++P +A
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAA 549
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
PYV +AN+YA G+W+ +A++R M+ +++K PG S + + K F ED
Sbjct: 550 TPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 201/422 (47%), Gaps = 12/422 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I D E A++LF+RM++ E + T + AC D + + +H V
Sbjct: 108 YNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAV 165
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKVL 140
F S V V Y+K L A +F M RD SWN+MIV + Q K L
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L+ M G + D T+ + A HL + H I G + V + I Y
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFY 285
Query: 201 AKC---NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF-DDSLNFYRHMIYDGFRP 256
+KC + + +E VF+ I +V WN++I G + ++ ++++ +R M G RP
Sbjct: 286 SKCGGRDGMSDSEKVFQEILSP--DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRP 343
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARFL 315
D + V + S+C + QG+ +H I + +SV N LIS+Y K G++ AR +
Sbjct: 344 DDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRV 403
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M + VS+ MI GYAQ G EALRL+ M +G P+ +T ++++S C G +
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKV 463
Query: 376 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIA 433
+ G K+F+ + ++ + +ID+ + G + +A A+P K V+W ++
Sbjct: 464 DEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 434 GC 435
C
Sbjct: 524 AC 525
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 203/502 (40%), Gaps = 80/502 (15%)
Query: 152 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
Q F + L ++ + L KS+H+ + V + + N +++ Y+KC L A
Sbjct: 5 QWKFKSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARA 64
Query: 212 VFRGIEE-----------------------------GLRTVVSWNSIIGGCTYGDKFDDS 242
F EE VS+N++I G + +
Sbjct: 65 AFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAA 124
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
+ ++ M GF D T+ L+++C L+ + +H + GFD SV N ++
Sbjct: 125 MVLFKRMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTY 182
Query: 303 YSKCGDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
YSK G + A +F GM R VSW +MI Y Q + +AL L+ M G D+ T
Sbjct: 183 YSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG---SIGDARELFY 418
+ S+++ L G+ F G N V + LID YSKCG + D+ ++F
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQ 302
Query: 419 ALPEKTVVSWTTMIAGCALNGEFV-EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ +V W TMI+G ++N E EA+ F QM + RP+ +F+ V AC++
Sbjct: 303 EILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 478 KGWGYFNLMTK-----------------------------VYQVNPELN--HYSCMADLL 506
+G L K V+ PELN ++CM
Sbjct: 363 QGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGY 422
Query: 507 GRKGKLKEALDFVQSMPIKSDAGI------WGTLLCACKIHRNIEIGEY---VAYRLFEL 557
+ G EAL Q M D+GI + +L AC ++ G+ F++
Sbjct: 423 AQHGHGTEALRLYQRML---DSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKI 479
Query: 558 EPHSAAPYVEMANIYALGGRWD 579
EP A Y M ++ G+ +
Sbjct: 480 EP-EAEHYSCMIDLLGRAGKLE 500
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 160/360 (44%), Gaps = 13/360 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I E KAL L++ M + + T + A L + + HG ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 82 KSPFWSDIFVQTTMVDMYAKC---DRLDCAYKLFDKMPDRDVASWNAMIVGFA-QMGFLE 137
K+ F + V + ++D Y+KC D + + K+F ++ D+ WN MI G++ E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSE 327
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTW 196
+ + F M+ +G + D + + +T A + S K +H I + ++ +SV N
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNAL 387
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
IS Y K +L A VF + E VS+N +I G ++L Y+ M+ G P
Sbjct: 388 ISLYYKSGNLLDARRVFDRMPE--LNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAP 445
Query: 257 DVTTVVSLLSSCV-CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
+ T V++LS+C C + + ++ + + + + +I + + G ++ A
Sbjct: 446 NNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 316 FDGMCDRT-RVSWTAMISGYAQKGDL---DEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
D M + V+W A++ + ++ + A + M+ P V + +M + G+
Sbjct: 506 IDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATP-YVMLANMYADAGK 564
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/545 (35%), Positives = 301/545 (55%), Gaps = 9/545 (1%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
Q IH ++ + F+ +D+ + A LF ++P + ++N MI G
Sbjct: 48 QQIHTQMIINAIHKPNFLLHRFIDL----KDFNNASLLFSQIPYPNEYAFNIMIRGLTTT 103
Query: 134 -GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ +Y M+ GI+ + T + A + L+ + HS + G+ AD V
Sbjct: 104 WQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHV 163
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
++ I+ Y++C +L A VF I E + +VSWNS+I G + D++ + M
Sbjct: 164 RHSLITMYSRCGELGCARRVFDEISE--KDLVSWNSMISGYSRMGYAGDAVGLFGEMRDA 221
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
GF PD T+VS+L +C L G + + DL+ V + LI MY KCGD+ SA
Sbjct: 222 GFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSA 281
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R +FD M + V+W AMI+GYAQ G DEA+ LF M +G PD +T++ ++S C
Sbjct: 282 RRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASI 341
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GAL+ GKW D YA GL++++ V ALIDMY+KCGS+ DA +F +P+K VSW MI
Sbjct: 342 GALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMI 401
Query: 433 AGCALNGEFVEALDLFHQMMELD--LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+ A +G E+L LF +M + +RPN ++F+ VL AC HAG +++G F+LM+ +
Sbjct: 402 SALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSF 461
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P++ H+SCM DLL R G + EA DF++ MP K D + G LL AC+ RN+++ E V
Sbjct: 462 GLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERV 521
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
+ L E+EP ++ Y+ + I+A RWD A +R +M++ V K PG S + I +
Sbjct: 522 MHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHE 581
Query: 611 FTVED 615
F D
Sbjct: 582 FHAGD 586
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 217/419 (51%), Gaps = 6/419 (1%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
+ +MK I PNN T+PF+ ACA L + Q H ++KS +D V+ +++ MY+
Sbjct: 113 FYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYS 172
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
+C L CA ++FD++ ++D+ SWN+MI G+++MG+ + LF MR G + D +T++
Sbjct: 173 RCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVS 232
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ A L L + F + +D + V + I Y KC DL A VF + +
Sbjct: 233 ILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVK-- 290
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ VV+WN++I G D+++ + M G PD T+V +LS+C AL G+ +
Sbjct: 291 KDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWL 350
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
++ G D+ V LI MY+KCG +D A +F+ M + VSW AMIS A G
Sbjct: 351 DTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRP 410
Query: 341 DEALRLFFAMEAAGEV--PDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVC 397
E+L LF M G P+ ++ + ++S C +G ++ G+ FD + S GL +
Sbjct: 411 QESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHH 470
Query: 398 NALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ ++D+ ++ G + +A + +PEK V ++ C + + H ++E++
Sbjct: 471 SCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEME 529
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 6/329 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I A A+ LF M+ EP+ +T I AC L D I G +V
Sbjct: 195 WNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVV 254
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + FV + ++ MY KC L A ++FD+M +DV +WNAMI G+AQ G ++ +
Sbjct: 255 ENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAII 314
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF MR G+ D +T++G+ A L K + ++ G+ D+ V I YA
Sbjct: 315 LFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYA 374
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDVT 259
KC L A VF + + + VSWN++I + + +SL+ ++ M +G RP+
Sbjct: 375 KCGSLDDALRVFEDMPQ--KNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDI 432
Query: 260 TVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+ + +LS+CV + +GR L +G + + ++ + ++ G + A +
Sbjct: 433 SFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEK 492
Query: 319 MCDRT-RVSWTAMISGYAQKGDLDEALRL 346
M ++ V A++ ++ ++D + R+
Sbjct: 493 MPEKPDEVVLGALLGACQKRRNVDVSERV 521
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 306/573 (53%), Gaps = 31/573 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY--KLFDKMPDRDVASWNAMIVGFA 131
+ IH HI+K+ + +F + +++ A D +Y LF+ + + ++ WN+MI G +
Sbjct: 46 KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
L F M G++ + T L ++ K +H+ + +G +DV
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165
Query: 192 VCNTWISAYAKCNDLKMAELVF---------------------------RGI--EEGLRT 222
+ + I+ YA+ ++ A+LVF R + E ++
Sbjct: 166 IHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKD 225
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VVSWN++I G + ++L + M P+ +T+VS+LS+C AL G + S
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
G ++ ++N LI MYSKCGD+ +AR LFD M +R +SW MI GY E
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKE 345
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
AL LF M A+G P +T LS++ C GA++LGKW Y + + +LID
Sbjct: 346 ALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLID 405
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
+Y+KCG+I AR++F + K++ SW MI G A++G+ +A +LF +M + PN +T
Sbjct: 406 LYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEIT 465
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F+ +L AC HAG ++ G +F+ M + Y+++P+ HY CM DLLGR G +EA +Q+M
Sbjct: 466 FVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM 525
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
+K D IWG+LL AC+ H +E+GE VA RLFELEP + YV ++NIYA G+WD VA
Sbjct: 526 EVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVA 585
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+RT + +KK PG + + ++ F V D
Sbjct: 586 RIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGD 618
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 249/474 (52%), Gaps = 43/474 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS IR AL+ F RM + +EPN+ TFPF+ K+CAKL+ + IH H++
Sbjct: 97 WNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVL 156
Query: 82 KSPFWSDIFVQTTMVDMYAKCDR-------------------------------LDCAYK 110
K F SD+F+ T++++MYA+ +D A +
Sbjct: 157 KLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQ 216
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD+MP +DV SWNAMI G+AQMG ++ L LF +MR + + T++ + A +
Sbjct: 217 LFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNA 276
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L S+ S+ G+ +++ + N I Y+KC DL+ A +F + E R V+SWN +I
Sbjct: 277 LDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLE--RDVISWNVMI 334
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
GG T+ + ++L +R M+ G P T +S+L SC A+ G+ +H++ I+ F+
Sbjct: 335 GGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAY-INKNFN 393
Query: 291 -LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ S+ +LI +Y+KCG+I +AR +FDGM ++ SW AMI G A G D+A LF
Sbjct: 394 SVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSK 453
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M + G P+ +T + ++S C +G ++LG ++F + + +ID+ + G
Sbjct: 454 MSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAG 513
Query: 409 SIGDARELFYAL---PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
+A L + P+ + W +++ C +G VE +L + + +L P+
Sbjct: 514 LFEEAESLLQNMEVKPDGAI--WGSLLGACRDHGR-VELGELVAERL-FELEPD 563
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC--AKLSDF---LY 72
++ WN+ I +A KA LF +M + IEPN +TF I AC A L D +
Sbjct: 427 SLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFF 486
Query: 73 SQMIHGHIV--KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVG 129
S M+ + + KS + M+D+ + + A L M + D A W +++
Sbjct: 487 SSMVQDYKISPKSQHYG------CMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA 540
Query: 130 FAQMGFLE 137
G +E
Sbjct: 541 CRDHGRVE 548
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 302/571 (52%), Gaps = 2/571 (0%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M+ I + ++ + +AC K+ ++ H + ++ F++ +++ MY KC
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
L A K+FD+M +R++ SWN +I +A+ G +K C+F NM + + + T +G ++
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
++ L + K +HS I G+ ++ SV + Y KC L+ AELVF + E + V
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSE--KNAV 178
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
+W I+ G T ++ D+L + M+ +G D +L +C E L GR +H H
Sbjct: 179 AWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHI 238
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ G + +VSV L+ Y KC +++SA F+ + + VSW+A+I+GY Q G+ +EAL
Sbjct: 239 VKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEAL 298
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
+ F ++ + T S+ C G A L +A+I MY
Sbjct: 299 KTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMY 358
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
S+CG + A +F ++ + V+WT +IAG A G EAL LF +M + +RPN VTF+
Sbjct: 359 SRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFI 418
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
AVL AC+H+G + +G Y M+ Y V ++HY CM D+ R G L+EAL+ ++SMP
Sbjct: 419 AVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPF 478
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
DA W LL C +RN+EIGE A LF+L+P A Y+ M N+YA G+W AN+
Sbjct: 479 SPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANV 538
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R MM ++K S + + GK F V D
Sbjct: 539 RKMMAERNLRKELSCSWITVKGKVHRFIVGD 569
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 210/423 (49%), Gaps = 4/423 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WN+ I + K +F M + + +PN T+ ++ S +
Sbjct: 72 RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGK 131
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH H ++S S+ V T + +MY KC L+ A +F+KM +++ +W ++VG+ Q
Sbjct: 132 QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAE 191
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
L LF M G++ D + +A + L+ + +H + +G++++VSV
Sbjct: 192 RQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGT 251
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y KC++L+ A F I E VSW+++I G +F+++L + +
Sbjct: 252 PLVDFYVKCSNLESATKAFEWISEP--NDVSWSALITGYCQMGEFEEALKTFESLRTRSV 309
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+ T S+ +C G H+ I + +I+MYS+CG +D A
Sbjct: 310 DINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATR 369
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG- 373
+F+ + D V+WTA+I+GYA +G+ EAL+LF M+ G P+ VT +++++ C SG
Sbjct: 370 VFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGL 429
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMI 432
+E ++ ++ + + G+ + + ++D+YS+ G + +A EL ++P +SW ++
Sbjct: 430 VIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489
Query: 433 AGC 435
GC
Sbjct: 490 GGC 492
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/598 (31%), Positives = 326/598 (54%), Gaps = 6/598 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WNS I + +AL LFR M++ + N+ T + + C +L+ + +H
Sbjct: 231 VASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHA 290
Query: 79 HIVKSPFWSDIFVQ-TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++KS S++ +Q ++ MY KC R+D A ++F ++ ++D SWN+M+ + Q G
Sbjct: 291 ALLKSG--SEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYA 348
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + M G Q D ++ L+ A H L K VH++ I +D+D V NT +
Sbjct: 349 EAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLM 408
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC ++ + VF + ++ +SW +II + ++L +R +G + D
Sbjct: 409 DMYMKCRYIEYSAHVFDRMR--IKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVD 466
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ S+L +C E ++ + +H + I G LD+ V N +I +Y +CG++ + +F+
Sbjct: 467 PMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFE 525
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + V+WT+MI+ YA G L+EAL LF M++ PD V ++S++ G +L
Sbjct: 526 TVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAK 585
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + + ++L+DMYS CGS+ A ++F A+ K +V WT MI +
Sbjct: 586 GKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGM 645
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G +A+DLF +M++ + P+ V+FLA+L AC+H+ + +G Y ++M Y++ P
Sbjct: 646 HGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQE 705
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ DLLGR G+ +EA +F++SMP+K + +W +LL AC++H+N E+ A RL EL
Sbjct: 706 HYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLEL 765
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP + YV ++N++A G+W+ +R + ++K P S + I TFT D
Sbjct: 766 EPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRD 823
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 262/530 (49%), Gaps = 10/530 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMK---KNDIEPNNLTFPFIAKACAKLSDFLY 72
S T+ WN+ I + A +AL ++R M+ + + P+ T + KA D
Sbjct: 123 SRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRC 182
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFA 131
+HG VK FV ++ MYAKC LD A ++F+ M D RDVASWN+MI G
Sbjct: 183 GCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCL 242
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q G + L LF M+ + + T +G+ Q L+L + +H+ + G + ++
Sbjct: 243 QNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ 302
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
CN + Y KC + A VFR I+E + +SWNS++ + +++ F M+
Sbjct: 303 -CNALLVMYTKCGRVDSALRVFREIDE--KDYISWNSMLSCYVQNGLYAEAIEFISEMLR 359
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
GF+PD +VSL S+ L+ G+ VH++ I D D V NTL+ MY KC I+
Sbjct: 360 GGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEY 419
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ +FD M + +SWT +I+ YAQ EAL +F + G D + + S++ C
Sbjct: 420 SAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSG 479
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
+ L K YA GL D ++V N +ID+Y +CG + + ++F + +K +V+WT+M
Sbjct: 480 LETILLAKQLHCYAIRNGLLD-LVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSM 538
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I A +G EAL LF +M D++P+ V +++L A L KG + +
Sbjct: 539 INCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR-RN 597
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ E S + D+ G L AL ++ K D +W ++ A +H
Sbjct: 598 FHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMH 646
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 197/401 (49%), Gaps = 7/401 (1%)
Query: 76 IHGHIVKSPFWS--DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+H H V + D F+ T ++ MY KC R+ A LFD M R V SWNA+I +
Sbjct: 80 VHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSS 139
Query: 134 GFLEKVLCLFYNMRL---VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
G + L ++ MRL G+ D T+ + +A+ VH + G+D
Sbjct: 140 GSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRST 199
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N I+ YAKC L A VF + +G R V SWNS+I GC F +L+ +R M
Sbjct: 200 FVANALIAMYAKCGILDSAMRVFELMHDG-RDVASWNSMISGCLQNGMFLQALDLFRGMQ 258
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ T V +L C L GR +H+ + G ++++ N L+ MY+KCG +D
Sbjct: 259 RAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVD 317
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA +F + ++ +SW +M+S Y Q G EA+ M G PD ++S+ S G
Sbjct: 318 SALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVG 377
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G L GK YA L + V N L+DMY KC I + +F + K +SWTT
Sbjct: 378 HLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTT 437
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+I A + +EAL++F + + ++ + + ++L+AC+
Sbjct: 438 IITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACS 478
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 123/244 (50%), Gaps = 7/244 (2%)
Query: 272 EALVQGRLVHSHGIHYG-FDLDVSVINT-LISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
+A+ QG VH+H + G + D + T L+ MY KCG + AR LFDGM RT SW A
Sbjct: 72 KAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNA 131
Query: 330 MISGYAQKGDLDEALRLFFAME---AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
+I Y G EAL ++ AM A+G PD T+ S++ G G G A
Sbjct: 132 LIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAV 191
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEAL 445
GL + V NALI MY+KCG + A +F + + + V SW +MI+GC NG F++AL
Sbjct: 192 KHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQAL 251
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMAD 504
DLF M L N T + VLQ CT L G + L+ +VN + N M
Sbjct: 252 DLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYT 311
Query: 505 LLGR 508
GR
Sbjct: 312 KCGR 315
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/597 (32%), Positives = 313/597 (52%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR E+HK + LF MK + ++ TF + CA D H I+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++FV +VDMYAKC L+ A ++F++M DRD +WN +I + Q +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M L GI +D + +A H L K VH + G+D D+ ++ I Y+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +K A VF + E +VVS N++I G + + ++++ ++ M+ G P T
Sbjct: 576 KCGIIKDARKVFSSLPEW--SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITF 632
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFDGMC 320
+++ +C PE+L G H GF + + +L+ MY + A LF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 321 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ V WT M+SG++Q G +EAL+ + M G +PD T ++++ C +L G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
+ + + N LIDMY+KCG + + ++F + ++ VVSW ++I G A N
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +AL +F M + + P+ +TFL VL AC+HAG + G F +M Y + ++H
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+CM DLLGR G L+EA DF+++ +K DA +W +LL AC+IH + GE A +L ELE
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELE 932
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P +++ YV ++NIYA G W+ LR +M+ VKK PG S + + +T F D
Sbjct: 933 PQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGD 989
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 244/505 (48%), Gaps = 38/505 (7%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WNS + + K L F + +N I PN TF + CA+ ++ + + IH
Sbjct: 125 VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHC 184
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K + + +VDMYAKCDR+ A ++F+ + D + W + G+ + G E+
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ +F MR G + D HL+ V+V NT+I
Sbjct: 245 AVLVFERMRDEGHRPD---------------HLAF----------------VTVINTYI- 272
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
+ LK A L+F E VV+WN +I G ++ ++ +M +
Sbjct: 273 ---RLGKLKDARLLFG--EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+T+ S+LS+ L G +VH+ I G ++ V ++L+SMYSKC +++A +F+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ ++ V W AMI GYA G+ + + LF M+++G D T S++S C S LE+G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
F + L N+ V NAL+DMY+KCG++ DAR++F + ++ V+W T+I +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
EA DLF +M + + + L+ACTH L +G L K ++ +L+
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC-GLDRDLHT 566
Query: 499 YSCMADLLGRKGKLKEALDFVQSMP 523
S + D+ + G +K+A S+P
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 216/453 (47%), Gaps = 38/453 (8%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A+L+F RM+ P++L F T+
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAF-----------------------------------VTV 267
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
++ Y + +L A LF +M DV +WN MI G + G + F+NMR +++
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
T+ + A +L L VH+ I +G+ +++ V ++ +S Y+KC ++ A VF
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+EE + V WN++I G + + + + M G+ D T SLLS+C L
Sbjct: 388 LEE--KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G HS I ++ V N L+ MY+KCG ++ AR +F+ MCDR V+W +I Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q + EA LF M G V D + S + C L GK + GL ++
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
++LIDMYSKCG I DAR++F +LPE +VVS +IAG + N EA+ LF +M+
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRG 624
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ P+ +TF +++AC L G + +TK
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 183/431 (42%), Gaps = 71/431 (16%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L + K+VHS + +G+D++ + N + YAKC + AE F +E + V +WNS++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE---KDVTAWNSML 132
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ K L + + + P+ T +LS+C + GR +H I G +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+ L+ MY+KC I AR +F+ + D V WT + SGY + G +EA+ +F M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 351 EAAGEVPD---LVTVLS----------------------------MISGCGQSGA----- 374
G PD VTV++ MISG G+ G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 375 ------------------------------LELGKWFDNYACSGGLKDNVMVCNALIDMY 404
L+LG A GL N+ V ++L+ MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKC + A ++F AL EK V W MI G A NGE + ++LF M + TF
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
++L C + LE G + +++ K ++ L + + D+ + G L++A + M
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIK-KKLAKNLFVGNALVDMYAKCGALEDARQIFERM-C 490
Query: 525 KSDAGIWGTLL 535
D W T++
Sbjct: 491 DRDNVTWNTII 501
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 9/278 (3%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ VHS + G D + + N ++ +Y+KC + A FD + ++ +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y+ G + LR F ++ P+ T ++S C + +E G+ GL+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
N AL+DMY+KC I DAR +F + + V WT + +G G EA+ +F +M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ RP+ + F+ V+ G L+ F M+ +P++ ++ M G++G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCE 308
Query: 513 KEALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIG 547
A+++ +M +KS G++L A I N+++G
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 213/634 (33%), Positives = 321/634 (50%), Gaps = 66/634 (10%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S I +WN +I + K + AL +F M++ S Y+ MI
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRR-------------------STVTYNAMI 98
Query: 77 HGHIVKSPFW-----------SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
G++ + F D+ M+ Y K L A LF++MP++DV SWNA
Sbjct: 99 SGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNA 158
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
M+ GFAQ GF+E+ +F M + + ++ GL A + + + +
Sbjct: 159 MLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRL----FDSK 210
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+D ++ N + Y + L A +F + +R +SWN +I G ++
Sbjct: 211 MDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP--VRDKISWNIMITGYAQNGLLSEARRL 268
Query: 246 YRHM---------------IYDGFRPDVTTVVSLL--SSCVCPEALVQGRLVHSHGIHYG 288
+ + + +G + T + + + V A++ G V S I
Sbjct: 269 FEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAG-YVQSQQIEKA 327
Query: 289 FDL-------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+L + S NT+++ Y++CG+ID A+ LFD M R +SW AMISGYAQ G +
Sbjct: 328 RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EAL LF M+ G + + + +S C + ALELGK G + + NAL+
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
MY KCGSI +A ++F + EK +VSW TMIAG A +G EAL LF + M++ ++P+ V
Sbjct: 448 AMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDV 506
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
T + VL AC+H GF++KG YFN M + Y + HY+CM DLLGR G+L EAL+ ++S
Sbjct: 507 TLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKS 566
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MP DA WG LL A +IH + E+GE A ++FE+EP ++ YV ++N+YA GRW V
Sbjct: 567 MPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREV 626
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R+ M+ VKK PG S V I KT FTV D
Sbjct: 627 REMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 188/452 (41%), Gaps = 51/452 (11%)
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
D D+ WN I + + G E L +F MR + VT + + +
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCARK 112
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
V D D+ N +S Y K +L A +F + E + VVSWN+++ G
Sbjct: 113 V----FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE--KDVVSWNAMLSGFAQN 166
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+++ + M+ + + LLS+ V + R + + D ++
Sbjct: 167 GFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRLFDSKM----DWEIVSW 218
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N L+ Y + +D AR LFD M R ++SW MI+GYAQ G L EA RLF + +
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PI 274
Query: 357 PDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVC------------------ 397
D+ +M+SG Q+G L E + F+ + N M+
Sbjct: 275 RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQM 334
Query: 398 --------NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
N ++ Y++CG+I A+ LF +P++ +SW MI+G A +G+ EAL LF
Sbjct: 335 PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFI 394
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M NR L +C LE G + K + + +A + G+
Sbjct: 395 KMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLA-MYGKC 453
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
G ++EA D + + K D W T++ H
Sbjct: 454 GSIEEAFDVFEDITEK-DIVSWNTMIAGYARH 484
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 181/409 (44%), Gaps = 68/409 (16%)
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
VD+D+ N ISAY + + A VF G+ R+ V++N++I G +KFD +
Sbjct: 56 VDSDIVKWNRKISAYMRKGQCESALSVFNGMRR--RSTVTYNAMISGYLSNNKFDCARKV 113
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M D D+ N ++S Y K
Sbjct: 114 FEKMP---------------------------------------DRDLISWNVMLSGYVK 134
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
G++ +AR LF+ M ++ VSW AM+SG+AQ G ++EA ++F M E ++ +
Sbjct: 135 NGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNE----ISWNGL 190
Query: 366 ISGCGQSGALE-LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+S Q+G +E + FD+ + ++ N L+ Y + + DAR LF +P +
Sbjct: 191 LSAYVQNGRIEDARRLFDS-----KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRD 245
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+SW MI G A NG EA LF ++ P R F +GF++ G +
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMV---SGFVQN--GMLD 294
Query: 485 LMTKVYQVNPELNHYSCMADLLG--RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
T++++ PE N S A + G + ++++A + MP ++ + W T++
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS-WNTMVTGYAQCG 353
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
NI+ + + E+ + M + YA G+ + +L MKR+
Sbjct: 354 NIDQAKIL---FDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRD 399
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 206/669 (30%), Positives = 323/669 (48%), Gaps = 73/669 (10%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFI--------AKACAKLS 68
+ WN+ I D + +A LF +M + D + N++ + KA L
Sbjct: 69 NVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLG 128
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK------------------ 110
+ +HG K F D V+T+++DMY KC +D A K
Sbjct: 129 YLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIY 188
Query: 111 -------------LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
LF KMP+RD SWN MI +Q GF + L F M G + + +T
Sbjct: 189 GYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMT 248
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ A L +H+ + + DV I YAKC L+ A VF G+
Sbjct: 249 YASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLT 308
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E VSW S+IGG +++L + M D T+ ++L C+ + + G
Sbjct: 309 E--HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIG 366
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDI---------------------------- 309
+H+H I G D V V N L++MY+KCGD+
Sbjct: 367 EQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQA 426
Query: 310 ---DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
+ AR FD M +R +SW +M++ Y Q+G +E L+++ M G D +T + I
Sbjct: 427 GDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSI 486
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S C L LG A G NV V N+++ MYS+CG I +A+++F ++ K +V
Sbjct: 487 SACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLV 546
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW M+AG A NG+ + +++F +M+ + P+++++++VL C+H+GF+ +G YF M
Sbjct: 547 SWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSM 606
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
TK + ++P H+ CM DLLGR G+L++A + + MP K +A IWG LL AC+IH N ++
Sbjct: 607 TKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKL 666
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
E L EL+ Y +ANIY+ G+ GV N+R +M+ V+K PG S + ++
Sbjct: 667 AELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDN 726
Query: 607 KTCTFTVED 615
+ FTV+D
Sbjct: 727 RVHVFTVDD 735
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 214/460 (46%), Gaps = 50/460 (10%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
K CA L ++ +H ++ S IF+Q +++MY+ C + AY++F + +V
Sbjct: 12 KECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVY 71
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV---TVM------GLTQAAIHAK--- 169
SWN MI GFA G + + LF M + D V ++M G +A I A
Sbjct: 72 SWNTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATIKASGSL 127
Query: 170 -HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--------------- 213
+L L +H F D V + + Y KC + A+ VF
Sbjct: 128 GYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMI 187
Query: 214 ------RGIEEGL--------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
+++ L R VSWN++I + ++LN + M GFRP+
Sbjct: 188 YGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSM 247
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T S+LS+C L G +H+ + LDV LI MY+KCG ++SAR +FDG+
Sbjct: 248 TYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL 307
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ VSWT++I G AQ G +EAL LF M D T+ +++ C + +G+
Sbjct: 308 TEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGE 367
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ + GL +V V NAL+ MY+KCG + A F +P + ++SWT MI + G
Sbjct: 368 QLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAG 427
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ +A + F +M E N +++ ++L G+ E+G
Sbjct: 428 DVEKAREYFDKMPE----RNVISWNSMLATYMQRGYWEEG 463
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 150/364 (41%), Gaps = 87/364 (23%)
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
+ C ++ R +H+ I G + + N L++MYS CG I A +F G+
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG-------------CGQ 371
SW MISG+A G + EA +LF M D V+ SM+SG G
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHNGELEATIKASGS 126
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC------------------------ 407
G L+L +A + V +++DMY KC
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSM 186
Query: 408 -------GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
GS+ A ELF +PE+ VSW TMI+ + +G E L+ F +M RPN
Sbjct: 187 IYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNS 246
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS-C-MADLLGRKGKLKEA--- 515
+T+ +VL ACT LE WG +L ++ ++ P L+ Y+ C + D+ + G+L+ A
Sbjct: 247 MTYASVLSACTSIYDLE--WGA-HLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQV 303
Query: 516 -------------------------------LDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
+ ++ +P+ SD T+L C ++I
Sbjct: 304 FDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDI 363
Query: 545 EIGE 548
IGE
Sbjct: 364 SIGE 367
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 314/609 (51%), Gaps = 24/609 (3%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W I + A L++RM D EPN +TF + +C + D ++
Sbjct: 393 SRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQ 449
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH H+V S F SD+ +Q +V MY KC +D A+ +F+ + +R V +WN+M+ FA G
Sbjct: 450 IHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGC 509
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ L L+ M L G + D +T + + A + + ++ D++ N
Sbjct: 510 YERSLKLYERMLLEGTKPDKITYLAVLDAC------QSVSEARRYAATFELELDIAARNA 563
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+SAYA+C LK A+ F I+ V+WN++I G + +L + M +G R
Sbjct: 564 AVSAYARCGSLKEAKAAFDAIQWK-NNAVTWNAMISGLAQHGESKQALECFWKMELEGVR 622
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHS----HGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+ T ++ L +C + L +GR +H+ IH + ++ N +I+MY KCG +D
Sbjct: 623 ANSVTYLASLEACSSLKDLTRGRQLHARILLENIH-----EANLSNAVINMYGKCGSLDE 677
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A F M +R +SW MI+ YAQ G +AL F M+ G PD T L I CG
Sbjct: 678 AMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGS 737
Query: 372 SGALELGKWFDNYACSGG--LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+L LGK + + L+ + V AL+ MY++CGS+ DA+ +F+ + +V+W+
Sbjct: 738 VPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWS 797
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY-FNLMTK 488
+IA CA +G EALDLF +M +P+ +TF ++ AC+ G ++ G F+ + +
Sbjct: 798 NLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGR 857
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
VY V+ HY CM ++LGR GKL+EA +Q MP K+ IW LL AC ++E G
Sbjct: 858 VYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGI 917
Query: 549 YVAYRLFELEPHS-AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP-GQSLVHING 606
A R +L+P S AA +A +Y GRW+ A +R ++ ++ P G+S + +N
Sbjct: 918 RAANRAQQLDPGSFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVNN 977
Query: 607 KTCTFTVED 615
+ F +D
Sbjct: 978 RVHEFGEDD 986
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 142/523 (27%), Positives = 256/523 (48%), Gaps = 17/523 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + L FR+M+ + +P+ F + AC+ + IH +V
Sbjct: 95 WTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVV 154
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + + V +V++Y KC R+ A +F+++P+R++ SWNA+I AQ G + +
Sbjct: 155 LAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQ 213
Query: 142 LFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M L G ++ + T + + A + L KS H I G D+ + V N+ ++ Y
Sbjct: 214 VFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMY 273
Query: 201 AKCNDLKMAELVFRGIE-EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
KC + A LVF + + +V SW II + ++ + M +G P+
Sbjct: 274 GKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKV 333
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T V++L +C L Q + + H G +LD ++ +S ++K GD+ +AR +F+ +
Sbjct: 334 TFVTVLRACT---TLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENL 390
Query: 320 -CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
R VSWT MI YAQ+G + A L+ M+ P+ VT ++++ C + L
Sbjct: 391 GSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRA 447
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + + G + +V++ L+ MY KCGS+ A +F L E++VV+W +M++ A N
Sbjct: 448 EQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASN 507
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G + +L L+ +M+ +P+++T+LAVL AC + F L + N ++
Sbjct: 508 GCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARRYAATFELELDIAARNAAVSA 567
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
Y+ R G LKEA ++ K++A W ++ H
Sbjct: 568 YA-------RCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQH 603
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 163/601 (27%), Positives = 275/601 (45%), Gaps = 67/601 (11%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A +LF +M + PN +TF + +AC L+ + I + D + T V
Sbjct: 315 EAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQ---CEKIFARVKHLGLELDTTLGTAFV 371
Query: 97 DMYAKCDRLDCAYKLFDKM-PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+AK L A +F+ + R+V SW MI +AQ GF+ L+ M + +
Sbjct: 372 STFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNA 428
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
VT M + + + + L + +H+ + G ++DV + ++ Y KC + A +F
Sbjct: 429 VTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFEN 488
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
++E R+VV+WNS++ ++ SL Y M+ +G +PD T +++L +C +++
Sbjct: 489 LKE--RSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDAC---QSVS 543
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC-DRTRVSWTAMISGY 334
+ R + + +LD++ N +S Y++CG + A+ FD + V+W AMISG
Sbjct: 544 EAR---RYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGL 600
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
AQ G+ +AL F+ ME G + VT L+ + C L G+ L +N+
Sbjct: 601 AQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARI----LLENI 656
Query: 395 M---VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ NA+I+MY KCGS+ +A + F +PE+ V+SW TMIA A +G +AL+ F QM
Sbjct: 657 HEANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQM 716
Query: 452 MELDLRPNRVTFLAVLQAC-----------------THAGFLEKGWGYFNLMTKVYQVNP 494
P+R T+L + AC T A LE+ G + +Y
Sbjct: 717 DLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCG 776
Query: 495 ELNH---------------YSCMADLLGRKGKLKEALDFVQSMPI---KSDAGIWGTLLC 536
L+ +S + + G+ EALD + M + K DA + TL+
Sbjct: 777 SLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVA 836
Query: 537 ACKIHRNIEIGEYVAYRLFE----LEPHSAAP--YVEMANIYALGGRWDGVANLRTMMKR 590
AC ++ G R+F+ + P SA+ Y M + G+ + L M R
Sbjct: 837 ACSRRGVVKDG---GRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPR 893
Query: 591 N 591
Sbjct: 894 K 894
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 147/500 (29%), Positives = 251/500 (50%), Gaps = 18/500 (3%)
Query: 44 RMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD 103
++KK+ + + + CA+ +++H HI+ S + ++Q ++ MYAKC
Sbjct: 16 QLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCG 75
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
L A ++F+ +P +V SW A+I +A+ G L +VL F M+L G + D +
Sbjct: 76 CLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLT 135
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A A L+ K++H + G++ V V N ++ Y KC + A+ VF + E R +
Sbjct: 136 ACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPE--RNL 192
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VSWN++I D++ ++ M DG RP+ T VS++ +C L +G+ H
Sbjct: 193 VSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHE 252
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR---TRVSWTAMISGYAQKGD 339
I GFD + V N+L++MY KCG +D AR +F+ M R + SWT +I+ +A G
Sbjct: 253 RIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGH 312
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
L EA LF+ M+ G +P+ VT ++++ C E K F GL+ + + A
Sbjct: 313 LLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCE--KIFARVK-HLGLELDTTLGTA 369
Query: 400 LIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+ ++K G + AR++F L + VVSWT MI A G A DL+ +M D P
Sbjct: 370 FVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEP 426
Query: 459 NRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
N VTF+AV+ +C L + + +++ ++ + L C+ + G+ G + A
Sbjct: 427 NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQ--VCLVTMYGKCGSVDSAWS 484
Query: 518 FVQSMPIKSDAGIWGTLLCA 537
+++ +S W ++L A
Sbjct: 485 IFENLKERSVVA-WNSMLSA 503
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 315/608 (51%), Gaps = 18/608 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+L I + WNS IR D + + P+ T + CA+
Sbjct: 243 KLFDIMPERNLVSWNSMIRVFSDNGDDGAFM------------PDVATVVTVLPVCARER 290
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + +HG VK ++ V ++DMY+K + + +F +++V SWN M+
Sbjct: 291 EIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVG 350
Query: 129 GFAQMGFLEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
GF+ G + L M L G ++AD VT++ L LK +H + +
Sbjct: 351 GFSAEGDIHGTFDLLRQM-LAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQE 409
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D + N ++++YAKC L A+ VF GI +T+ SWN++IGG SL+
Sbjct: 410 FVYDELLANAFVASYAKCGSLSYAQRVFHGIRS--KTLNSWNALIGGYAQSSDPRLSLDA 467
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M G PD TV SLLS+C ++L G+ VH I + D+ V +++S+Y
Sbjct: 468 HLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 527
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG++ + + LFD M D + VSW +I+G+ Q G + AL LF M G P ++++++
Sbjct: 528 CGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTV 587
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
C +L LG+ YA L+DN + ++IDMY+K G+I + ++F L EK+
Sbjct: 588 FGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSA 647
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
SW MI G ++G EA+ LF +M P+ +TFL VL AC H+G L +G Y +
Sbjct: 648 ASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQ 707
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M + + P L HY+C+ D+LGR G+L AL M + D GIW +LL C+IH+N+E
Sbjct: 708 MKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLE 767
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+GE VA +LF LEP YV ++N+YA G+WD V +R MK ++K G S + +N
Sbjct: 768 MGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELN 827
Query: 606 GKTCTFTV 613
GK +F V
Sbjct: 828 GKVFSFVV 835
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 229/460 (49%), Gaps = 17/460 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYS 73
RS + QWN+ I H+ L +F +M K + P+N TFP + KACA +SD
Sbjct: 147 RSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIG 206
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+HG +VK+ D+FV +V Y + A KLFD MP+R++ SWN+MI F+
Sbjct: 207 LAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN 266
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G D TV+ + + + + K VH + + + +D ++ V
Sbjct: 267 G------------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVN 314
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI--Y 251
N + Y+K + ++++F+ + VVSWN+++GG + + + R M+
Sbjct: 315 NALMDMYSKWGCIIDSQMIFK--LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGS 372
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+ + D T+++ + C L + +H + + F D + N ++ Y+KCG +
Sbjct: 373 EDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSY 432
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A+ +F G+ +T SW A+I GYAQ D +L M+ +G +PD TV S++S C +
Sbjct: 433 AQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSK 492
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
+L LGK + L+ ++ V +++ +Y CG + + LF A+ + ++VSW T+
Sbjct: 493 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTV 552
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
I G NG AL LF QM+ ++P ++ + V AC+
Sbjct: 553 ITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACS 592
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 195/426 (45%), Gaps = 20/426 (4%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
+ +A K D + IH H+V + SD + T ++ MYA C D + FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALR 147
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
+++ WNA+I +++ +VL +F M + D T + +A + +
Sbjct: 148 SKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGL 207
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+VH + G+ D+ V N +S Y + A +F + E R +VSWNS+I +
Sbjct: 208 AVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPE--RNLVSWNSMIR--VF 263
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
D DD F PDV TVV++L C + G+ VH + D ++ V
Sbjct: 264 SDNGDDG----------AFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVV 313
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N L+ MYSK G I ++ +F ++ VSW M+ G++ +GD+ L M A E
Sbjct: 314 NNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSE 373
Query: 356 --VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
D VT+L+ + C L K Y+ + ++ NA + Y+KCGS+ A
Sbjct: 374 DVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYA 433
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+ +F+ + KT+ SW +I G A + + +LD QM L P+ T ++L AC+
Sbjct: 434 QRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKL 493
Query: 474 GFLEKG 479
L G
Sbjct: 494 KSLRLG 499
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VP 357
+I+MY+ CG D +R FD + + W A+IS Y++ E L +F M + +P
Sbjct: 126 IITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLP 185
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T +I C + +G GL +++ V NAL+ Y G + DA +LF
Sbjct: 186 DNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLF 245
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+PE+ +VSW +MI + NG+ + P+ T + VL C +
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGD------------DGAFMPDVATVVTVLPVCAREREIG 293
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
G G K+ ++ EL + + D+ + G
Sbjct: 294 VGKGVHGWAVKL-SLDKELVVNNALMDMYSKWG 325
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS------MISGCGQSGALELGKWFDNY 384
IS + + GDLD++ R+ E V +L ++ G+ +E+G+ +
Sbjct: 50 ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHL 109
Query: 385 AC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
S L+ + ++C +I MY+ CGS D+R F AL K + W +I+ + N + E
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHE 169
Query: 444 ALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
L++F +M+ + L P+ TF V++AC + G L+ K V +L + +
Sbjct: 170 VLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVE-DLFVGNAL 228
Query: 503 ADLLGRKGKLKEALDFVQSMPIKS 526
G G + +AL MP ++
Sbjct: 229 VSFYGTHGFVSDALKLFDIMPERN 252
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 202/622 (32%), Positives = 317/622 (50%), Gaps = 31/622 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS---DFLYSQMIHG 78
WNS I + +AL FR M+ ++E ++ T +A AC+ L + +HG
Sbjct: 162 WNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHG 221
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ ++ F ++ MYAK R+D + LF+ DRD+ SWN MI F+Q +
Sbjct: 222 YSLRVGD-QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSE 280
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS-VCNTWI 197
L F M L G++ D VT+ + A H + L + K +H++ + + S V + +
Sbjct: 281 ALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALV 340
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRP 256
Y C ++ VF I R + WN++I G + +L + MI G P
Sbjct: 341 DMYCNCRQVESGRRVFDHILG--RRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLP 398
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ TT+ S++ +CV EA +H + + GF D V N L+ MYS+ G +D + +F
Sbjct: 399 NTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIF 458
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-----------------PDL 359
D M R RVSW MI+GY G AL L M+ P+
Sbjct: 459 DSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNA 518
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+T+++++ GC A+ GK YA L ++ V +AL+DMY+KCG + +R +F
Sbjct: 519 ITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNE 578
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL-----DLRPNRVTFLAVLQACTHAG 474
+P K V++W +I C ++G+ EAL+LF M+ + +PN VTF+ V AC+H+G
Sbjct: 579 MPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 638
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWGT 533
+ +G F M + V P +HY+C+ DLLGR G+L+EA + V +MP + D G W +
Sbjct: 639 LISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSS 698
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL AC+IH+N+E+GE A L LEP+ A+ YV ++NIY+ G W+ +R M++ V
Sbjct: 699 LLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGV 758
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
KK PG S + + F D
Sbjct: 759 KKEPGCSWIEFRDEVHKFMAGD 780
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 161/568 (28%), Positives = 269/568 (47%), Gaps = 44/568 (7%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
S PP+ RS+ W +R N+ +A+ + M + P+N FP + KA
Sbjct: 44 SKTPPKPTSPSRSTA--SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKA 101
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
+ L D + IH VK + S + V T+V+MY KC + K+FD++ DRD S
Sbjct: 102 VSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVS 161
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA-----AIHAKHLSLLKSV 177
WN+ I + E+ L F M++ ++ T++ + A +H L L K +
Sbjct: 162 WNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHG--LRLGKQL 219
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H + + +G D N ++ YAK + ++ +F + R +VSWN++I + D
Sbjct: 220 HGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVD--RDMVSWNTMISSFSQSD 276
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+F ++L F+R M+ +G D T+ S+L +C E L G+ +H++ + ++ S +
Sbjct: 277 RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG 336
Query: 298 T-LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGE 355
+ L+ MY C ++S R +FD + R W AMISGYA+ G ++AL LF M + AG
Sbjct: 337 SALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGL 396
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
+P+ T+ S++ C A + YA G K++ V NAL+DMYS+ G + +
Sbjct: 397 LPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-----------------LRP 458
+F ++ + VSW TMI G L+G + AL L H+M ++ +P
Sbjct: 457 IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKP 516
Query: 459 NRVTFLAVLQACTHAGFLEKG-----WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
N +T + VL C + KG + N++ V S + D+ + G L
Sbjct: 517 NAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVG------SALVDMYAKCGCLN 570
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ MP K + W L+ AC +H
Sbjct: 571 LSRRVFNEMPNK-NVITWNVLIMACGMH 597
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/614 (32%), Positives = 320/614 (52%), Gaps = 19/614 (3%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
P N + +S I ++ + +A+ L+ +M + D+ P+ F I KACA
Sbjct: 129 PERNLVSYTSVITGYS-------QNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASS 181
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
SD + +H ++K S + Q ++ MY + +++ A ++F +P +D+ SW+++I
Sbjct: 182 SDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSII 241
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK-----SVHSFGI 182
GF+Q+GF + L M G+ + G + A SLL+ +H I
Sbjct: 242 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS----SLLRPDYGSQIHGLCI 297
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
+ + + YA+C L A VF IE SWN II G D++
Sbjct: 298 KSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP--DTASWNVIIAGLANNGYADEA 355
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
++ + M GF PD ++ SLL + P AL QG +HS+ I +GF D++V N+L++M
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 303 YSKCGDIDSARFLFDGMCDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
Y+ C D+ LF+ + VSW +++ Q E LRLF M + PD +T
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ +++ GC + +L+LG Y+ GL + N LIDMY+KCGS+G AR +F ++
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ VVSW+T+I G A +G EAL LF +M + PN VTF+ VL AC+H G +E+G
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ M + ++P H SC+ DLL R G+L EA F+ M ++ D +W TLL ACK
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 655
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
N+ + + A + +++P ++ +V + +++A G W+ A LR+ MK++ VKK PGQS
Sbjct: 656 GNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSW 715
Query: 602 VHINGKTCTFTVED 615
+ I K F ED
Sbjct: 716 IEIEDKIHIFFAED 729
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 240/519 (46%), Gaps = 13/519 (2%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNL-TFPFIAKACAKLSDFLYSQMIHGHIV 81
N I N +AL F +KN L T+ + AC+ + IH HI+
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S D + ++ MY KC L A ++FD MP+R++ S+ ++I G++Q G + +
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ M + D + +A + + L K +H+ I + + + N I+ Y
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT-YGDKFDDSLNFYRHMIYDG-FRPDVT 259
+ N + A VF GI ++ ++SW+SII G + G +F ++L+ + M+ G F P+
Sbjct: 215 RFNQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEF-EALSHLKEMLSFGVFHPNEY 271
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
S L +C G +H I + +L MY++CG ++SAR +FD +
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
SW +I+G A G DEA+ +F M ++G +PD +++ S++ + AL G
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
+Y G ++ VCN+L+ MY+ C + LF VSW T++ C +
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY--FNLMTKVYQVNPEL 496
+ VE L LF M+ + P+ +T +L+ C L+ G ++L T + PE
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA---PEQ 508
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + D+ + G L +A SM + D W TL+
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 989
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 193/581 (33%), Positives = 317/581 (54%), Gaps = 5/581 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + NE + AL F +M+ ++ P+ T + C + D ++ IH + V
Sbjct: 411 WNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAV 470
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F + V ++ MY C L +YKLF KM R + SWN +I G+A++ LE +
Sbjct: 471 RNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVK 530
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ MR G+Q D VT++GL + A+ ++ +S+HS + G + D+S+ NT I+ Y+
Sbjct: 531 LFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYS 590
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
C ++ + +F + R VS+N ++ G + ++ L +R M+ + P+ TV
Sbjct: 591 NCGSVEACQRLFDNLSS--RNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITV 648
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL C + QG+ VH + I L+ S + I MYS+ ++D + LF+ + +
Sbjct: 649 LNLLPVC---QNHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGE 705
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R + W A++S Q D A F M PD VT++S++S C Q G +LG+
Sbjct: 706 RNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECV 765
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G ++V NALIDM+S+CGS+ ARELF + K V+W+ MI +++G+
Sbjct: 766 TALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHGDC 825
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
AL +F M++ ++P+ +TF+ +L AC+H+GF+E+ F + + + P + HY+C
Sbjct: 826 ESALAIFSMMIDSGVKPDDITFVIILSACSHSGFVEQARALFKSLQIDHGITPRMEHYAC 885
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G L EA D V+SM + + +LL AC+ H N +IGE V L + + +
Sbjct: 886 MVDLLGRSGHLDEAYDVVRSMSFRPSESLLESLLGACRFHGNSKIGEAVGNLLIDSQHGN 945
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
YV ++NIYA G+W+ LR M+ ++K G SLV
Sbjct: 946 PRSYVMLSNIYASVGKWNDYEWLRVDMEAKGLRKDAGVSLV 986
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/474 (30%), Positives = 243/474 (51%), Gaps = 4/474 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R T+ N +R D + L L+R + +N TFP + KACA +S +
Sbjct: 103 RRPTVYSLNLAVRCFSDHGFHRELLDLYRTLCT--FGSDNFTFPPVIKACAAVSCLPLGR 160
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H ++++ ++ VQT ++DMYAK + + +FD M +D+ SWNAMI G++ G
Sbjct: 161 EMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNG 220
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
L + + M+ G++A+ T++ + A A S+H+F + GV D S+
Sbjct: 221 SLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAP 280
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
IS YA +DL + ++F + ++ +VS+NS+I K+ +S + +R M G
Sbjct: 281 ALISLYAALDDLSSSRVLFD--LQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGL 338
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P++ TV+S+L +C + G VH I +G +SV++ L+SMYSK G++DSA+
Sbjct: 339 GPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKH 398
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LFD ++ + W ++ISGY + + AL F M+ PD TV+ +I GC
Sbjct: 399 LFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKD 458
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L + K YA + N V NAL+ MY CG + + +LF + + ++SW T+I+G
Sbjct: 459 LRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISG 518
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
A + ++ LF QM + L+ + VT + ++ + + A G +L K
Sbjct: 519 YAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVK 572
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/547 (27%), Positives = 244/547 (44%), Gaps = 28/547 (5%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
+ PR + +S + S+ ++A+ K+ A +L R + D P L K +
Sbjct: 1 MNPRHKTLPKSFETPNFLSKSKQALAKSFA--SLTPPRALPHPDAFPEFLHATRSLKCLS 58
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR--DVASW 123
KL L + G I + D V T +VD Y R A +F R V S
Sbjct: 59 KLHALL---AVAGAIAR-----DTSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSL 110
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
N + F+ GF ++L L+ + G +D T + +A L L + +H +
Sbjct: 111 NLAVRCFSDHGFHRELLDLYRTLCTFG--SDNFTFPPVIKACAAVSCLPLGREMHCRVLR 168
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G + +V V + YAK + + VF + G + ++SWN++I G + +++
Sbjct: 169 TGHEGNVGVQTALLDMYAKAGWIGASRTVFDFM--GQKDLISWNAMISGYSLNGSLREAV 226
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ M DG R + +T+V + +C G +H+ + G D S+ LIS+Y
Sbjct: 227 EATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLY 286
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
+ D+ S+R LFD + VS+ +MIS Y Q G E+ +F M AG P+LVTV+
Sbjct: 287 AALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVI 346
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
S++ C + LG GL + + V +AL+ MYSK G + A+ LF + EK
Sbjct: 347 SVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEK 406
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
+ W ++I+G +N E+ ALD F +M ++ P+ T + V+ C H L
Sbjct: 407 NNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKS-- 464
Query: 484 NLMTKVYQVNP--ELNHYSCMADLL---GRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
Y V ELN S M LL G G+L + Q M ++ W T++
Sbjct: 465 ---IHAYAVRNRFELNQ-SVMNALLAMYGDCGELSSSYKLFQKMEVRMLIS-WNTIISGY 519
Query: 539 KIHRNIE 545
R++E
Sbjct: 520 AEIRDLE 526
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 326/595 (54%), Gaps = 5/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+S + V +A + L +F +M +EP+++T + +AC++L + +HG++V
Sbjct: 169 WSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVV 228
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ S+ + +++ MY K L A +LF+ +P R A W MI + Q G ++ L
Sbjct: 229 RREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALN 288
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN-TWISAY 200
+F M+ ++ + VT++G+ A + +SVH F I +D ++ + Y
Sbjct: 289 VFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 348
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A +L+ VF I+E +T++SWN++I T + +++L + M G PD +
Sbjct: 349 ADTGNLRDCHKVFETIKE--KTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 406
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S LS+C G +H + I G + + V N LI MY+KCG + SA +F+ +
Sbjct: 407 LASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIK 465
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+++ V+W +MI G++Q G EA+ LF M D +T LS+I C G LE GKW
Sbjct: 466 EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKW 525
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ GL+ + + AL DMYSKCG + A +F + E+++VSW+ MIAG ++G+
Sbjct: 526 VHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQ 585
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+ LF+QM+ ++PN +TF+ +L AC+HAG +E+G YFN M++ + V P+ +H++
Sbjct: 586 INATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFA 644
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLL R G L A + S+P +++ IWG LL C+IH+ I+I + + L +++
Sbjct: 645 CMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTA 704
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y ++NIYA G WD +R+MMK ++K PG S + I+ K F D
Sbjct: 705 DTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGD 759
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/511 (31%), Positives = 268/511 (52%), Gaps = 9/511 (1%)
Query: 37 KALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A+ L+ M D + +N FP + KAC+ D +HG ++K F SD V+T++
Sbjct: 82 EAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSL 141
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+ MY + LD A K FD MP RDV +W+++++ F Q G + L +F M ++ D
Sbjct: 142 LCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDS 201
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
VT++ +T+A L L +SVH + + ++++ S+ N+ I Y K DL AE +F
Sbjct: 202 VTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFEN 261
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ R W +I F ++LN + M P+ T+V +L +C +
Sbjct: 262 VP--CRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319
Query: 276 QGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+GR VH I D ++ + L+ +Y+ G++ +F+ + ++T +SW +IS +
Sbjct: 320 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 379
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
+ G +EAL LF M+ G +PD ++ S +S CG +LG Y G N
Sbjct: 380 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFND 438
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V NALIDMY+KCG + A ++F + EK++V+W +MI G + NG VEA+ LF QM
Sbjct: 439 FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMN 498
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
++ +++TFL+V+QAC+H G+LEKG W + L+ +Y + + + + D+ + G+L+
Sbjct: 499 CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLI--MYGLRKDSYLDTALTDMYSKCGELQ 556
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
A M +S W ++ +H I
Sbjct: 557 MAHGVFDRMSERSIVS-WSVMIAGYGMHGQI 586
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 215/464 (46%), Gaps = 7/464 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H H+ + T +++ YA+ + + ++FD P D W +I + GF
Sbjct: 20 LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 79
Query: 136 LEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E+ + L++ M Q + +A LS+ VH I G ++D V
Sbjct: 80 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET 139
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ + Y + + L A F + +R VV+W+SI+ + + L+ + MI +
Sbjct: 140 SLLCMYGEMSCLDDACKAFDTMP--IRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T++S+ +C +L GR VH + + + + S+ N+LI MY K GD+ SA
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAER 257
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LF+ + R WT MIS Y Q G EAL +F M+ P+ VT++ ++ C + G
Sbjct: 258 LFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGR 317
Query: 375 LELGKWFDNYACSGGLKDNV-MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
++ G+ + + + + AL+++Y+ G++ D ++F + EKT++SW T+I+
Sbjct: 318 VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLIS 377
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
NG+ EAL LF QM L P+ + + L AC F + G + K N
Sbjct: 378 IFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFN 437
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + + D+ + G + A + + KS W +++C
Sbjct: 438 DFVQN--ALIDMYAKCGFVHSANKMFEKIKEKSLV-TWNSMICG 478
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 168/320 (52%), Gaps = 4/320 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ TI WN+ I + +ALLLF +M+ + P++ + AC +S
Sbjct: 365 KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGA 424
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG+I+K+ ++D FVQ ++DMYAKC + A K+F+K+ ++ + +WN+MI GF+Q G
Sbjct: 425 QIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNG 483
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + + LF M + ++ D +T + + QA H +L K VH I G+ D +
Sbjct: 484 YSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDT 543
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
Y+KC +L+MA VF + E R++VSW+ +I G + + +++ + M+ G
Sbjct: 544 ALTDMYSKCGELQMAHGVFDRMSE--RSIVSWSVMIAGYGMHGQINATISLFNQMLGSGI 601
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+P+ T + +LS+C A+ +G+L + +G + ++ + S+ GD++ A
Sbjct: 602 KPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQ 661
Query: 315 LFDGMCDRTRVS-WTAMISG 333
+ + S W A+++G
Sbjct: 662 IITSLPFPANSSIWGALLNG 681
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 11 NKIY---RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
NK++ + ++ WNS I + +A+ LF +M N ++ + LTF + +AC+ L
Sbjct: 458 NKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHL 517
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +H ++ D ++ T + DMY+KC L A+ +FD+M +R + SW+ MI
Sbjct: 518 GYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMI 577
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ G + + LF M GI+ + +T M + A HA + K + GV+
Sbjct: 578 AGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVE 637
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ ++ DL A + + + + W +++ GC + D
Sbjct: 638 PKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSI-WGALLNGCRIHKRID 689
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 307/595 (51%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + N++ +A L+ M++ IEP+ +T + +L IH H++
Sbjct: 108 WTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVI 167
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++ V ++VD Y K L A +LF M ++D ++N+++ G++ G E+ +
Sbjct: 168 KLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIE 227
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF + GI+ T L AA+ + VH F + +V V N + Y+
Sbjct: 228 LFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYS 287
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + + +F + E +S+N +I + +F +S + +R + + F
Sbjct: 288 KHDQVDEVGKLFXEMPE--LDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPF 345
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+LLS L GR +H I G + + V N L+ MY+KC A+ +FD +
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIAC 405
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
++ V WTAMIS Y QKG +E + +F M G D T S++ C ++ LG+
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G NV +AL+D Y+KCG + DA + F +PE+ VSW +I+ A NG
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
L+ F QM++ +P+ V+FL+VL AC+H GF+E+ +FN MT++Y+V P+ HY+
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTS 585
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-H 560
M D+L R G+ EA + MP + +W ++L +C+IH+N E+ + A RLF +E
Sbjct: 586 MVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLR 645
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
AAPY+ M+NIYA+ G+WD VA ++ M+ V+K P S V I +T F+ D
Sbjct: 646 DAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSAND 700
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 140/570 (24%), Positives = 261/570 (45%), Gaps = 43/570 (7%)
Query: 58 PFIAKACAKLSDFL-YSQMIHGHIV--KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK 114
P ++ ++++FL ++H H V + P + I + M+ + K +L A +LFD
Sbjct: 41 PNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISL-NMMISGHLKFGKLSKARELFDG 99
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
M +R SW +I G+ Q ++ L+ +MR GI+ D+VT++ L + +++
Sbjct: 100 MVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI 159
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+H+ I +G + ++ VCN+ + AY K + L +A +F+ + + V++NS++ G +
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN--KDTVTFNSLMTGYS 217
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
++++ + + G +P T +LLS+ V + G+ VH + F +V
Sbjct: 218 NEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V N L+ YSK +D LF M + +S+ +I+ YA G E+ LF ++
Sbjct: 278 VGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTR 337
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+++S S L +G+ A + G V NAL+DMY+KC +A+
Sbjct: 338 FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F + K+ V WT MI+ G+ E +++F M + ++ TF ++L+AC +
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457
Query: 475 FLEKGWGYFNL------MTKVYQVNPELNHYS---CMADLLGRKGKLKE----------- 514
+ G +L M+ VY + L+ Y+ CM D + G++ E
Sbjct: 458 SISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALIS 517
Query: 515 ----------ALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIGEY---VAYRLFELE 558
L+ Q M K D+ + ++L AC +E + +++E+
Sbjct: 518 AYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVT 577
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMM 588
P Y M ++ GR+D L T M
Sbjct: 578 PKREH-YTSMVDVLCRNGRFDEAEKLMTEM 606
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 139/272 (51%), Gaps = 13/272 (4%)
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV-INTLISMYSKC 306
H++ GF P+ + S+ L +G LVH+H + ++ +N +IS + K
Sbjct: 33 HIVKTGFNPN-----TCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKF 87
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + AR LFDGM +RT VSWT +I GY Q EA RL+ M G PD VT+++++
Sbjct: 88 GKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL 147
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
SG G+ + + G + N+MVCN+L+D Y K + A +LF + K V
Sbjct: 148 SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTV 207
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT---HAGFLEKGWGYF 483
++ +++ G + G EA++LF ++ ++P+ TF A+L A F ++ G+
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFV 267
Query: 484 ---NLMTKVYQVNPELNHYSCMADLLGRKGKL 512
N + V+ N L++YS D + GKL
Sbjct: 268 LKTNFVWNVFVGNALLDYYS-KHDQVDEVGKL 298
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 294/523 (56%), Gaps = 7/523 (1%)
Query: 98 MYAKCDRLDCAYK--LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQAD 154
+Y D D AY F + D S+N MI G + + FY+ M+ +G++ +
Sbjct: 67 LYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPN 126
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+T L A + + + H I G+D D V ++ I+ YA+C + A VF
Sbjct: 127 NLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFD 186
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I + + +VSWNS+I G + +++ +R M+ GF+P+ ++VS+L +C L
Sbjct: 187 EISQ--KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDL 244
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G V + L+ + + LI MY KCGD+ SAR +FD M + +V+W AMI+GY
Sbjct: 245 KLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGY 304
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
AQ G +EA++LF M + PD +T++ ++S C GAL+LGK + YA G +D+V
Sbjct: 305 AQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDV 364
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V AL+DMY+KCGS+ +A +FY +P+K VSW MI+ A +G+ EAL LF MM
Sbjct: 365 YVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNE 424
Query: 455 --DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ PN +TF+ VL AC HAG +++G F++M+ + + P++ HYSCM DL R G L
Sbjct: 425 GGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHL 484
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIY 572
+EA DFV +MP K D I G LL AC+ +NI+I E V L ELEP ++ YV + +Y
Sbjct: 485 EEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLY 544
Query: 573 ALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A RWD A +R +MK+ V K PG S + IN + F D
Sbjct: 545 ANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGD 587
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 207/394 (52%), Gaps = 5/394 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N++ AL + RMK ++PNNLT+PF+ AC+ L +M H +++ D V
Sbjct: 106 NKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVS 165
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MYA+C ++ A K+FD++ +D+ SWN+MI G+++M + + LF M G Q
Sbjct: 166 HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ ++++ + A L L V F + + + + + I Y KC DL A +
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRI 285
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F +++ + V+WN++I G ++++ ++ M PD T++ +LS+C
Sbjct: 286 FDSMKK--KDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIG 343
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ V + GF DV V L+ MY+KCG +D+A +F GM + VSW AMIS
Sbjct: 344 ALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMIS 403
Query: 333 GYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGG 389
A G EAL LF +M E P+ +T + ++S C +G ++ G + F + S G
Sbjct: 404 ALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFG 463
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
L + + ++D++S+ G + +A + +PEK
Sbjct: 464 LVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 146/294 (49%), Gaps = 5/294 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I A +A+ LFR M + +PN ++ + AC +L D + +V
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + F+ + ++ MY KC L A ++FD M +D +WNAMI G+AQ G E+ +
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +MR+ D +T++G+ A L L K V + G DV V + YA
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDVT 259
KC L A VF G+ + + VSWN++I + + ++L ++ M+ +G P+
Sbjct: 376 KCGSLDNAFRVFYGMPK--KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDI 433
Query: 260 TVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
T V +LS+CV + +G RL H +G + + ++ ++S+ G ++ A
Sbjct: 434 TFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 305/594 (51%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + +L LF +MK+ + P+ + AC L + IH +++
Sbjct: 210 WTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVL 269
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S D+ + +D Y KC ++ KLFD+M D++V SW +I G Q F L
Sbjct: 270 RSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALD 329
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M +G D + + L + VH++ I + +D D V N I YA
Sbjct: 330 LFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 389
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC+ L A VF + +VS+N++I G + DK ++L+ +R M P +
Sbjct: 390 KCDSLTDARKVFNLM--AAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIF 447
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VSLL L +H I YG LD + LI +YSKC + AR +F+ + D
Sbjct: 448 VSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQD 507
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V WTAM SGY Q+ + +E+L+L+ ++ + P+ T ++I+ +L G+ F
Sbjct: 508 KDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQF 567
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N G D+ V N L+DMY+K GSI +A + F + K W +MIA A +GE
Sbjct: 568 HNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEA 627
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL +F M+ L+PN VTF+ VL AC+H G L+ G+ +F+ M++ + + P + HY C
Sbjct: 628 EKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVC 686
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M LLGR GKL EA +F++ MPIK A +W +LL AC++ N+E+G Y A P
Sbjct: 687 MVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPAD 746
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++NI+A G W V LR M + V K PG S + +N + F +D
Sbjct: 747 SGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKD 800
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 260/526 (49%), Gaps = 7/526 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRR-MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+S + + +AL+LF + M+ + +PN + +AC + + IHG +
Sbjct: 108 WSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLV 167
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK + D++V T+++D Y K +D A LFD + + +W +I G+++ G + L
Sbjct: 168 VKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSL 227
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M+ + D + + A + K L K +H + + G+ DVS+ N +I Y
Sbjct: 228 KLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFY 287
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC+ +++ +F + + + VVSW ++I GC D+L+ + M G+ PD
Sbjct: 288 FKCHKVQLGRKLFDRMVD--KNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFG 345
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+L+SC AL +GR VH++ I D D V N LI MY+KC + AR +F+ M
Sbjct: 346 CTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMA 405
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
VS+ AMI GY+++ L EAL LF M + P L+ +S++ LEL
Sbjct: 406 AIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ 465
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G+ + +ALID+YSKC +GDAR +F + +K +V WT M +G E
Sbjct: 466 IHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSE 525
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHY 499
E+L L+ + L+PN TF AV+ A ++ L G + N + K+ + +P +
Sbjct: 526 NEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVA-- 583
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ + D+ + G ++EA S K D W +++ H E
Sbjct: 584 NTLVDMYAKSGSIEEAHKAFISTNWK-DTACWNSMIATYAQHGEAE 628
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 198/394 (50%), Gaps = 4/394 (1%)
Query: 76 IHGHIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH IV F DIF+ T++ Y+K + ++ A KLFD M +++ +W++M+ +
Sbjct: 60 IHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHS 119
Query: 135 FLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L LF MR + + + + +A L+ +H + G DV VC
Sbjct: 120 HCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVC 179
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ I Y K + A L+F G++ ++T +W +II G + + SL + M
Sbjct: 180 TSLIDFYTKHACIDDARLLFDGLQ--VKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD + S+LS+C+ + L G+ +H + + G +DVS++N I Y KC + R
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGR 297
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M D+ VSWT +I+G Q +AL LF M G PD S+++ CG
Sbjct: 298 KLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLV 357
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALE G+ YA + ++ V N LIDMY+KC S+ DAR++F + +VS+ MI
Sbjct: 358 ALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIE 417
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + + EALDLF +M P + F+++L
Sbjct: 418 GYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLL 451
>gi|147771209|emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
Length = 598
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 327/599 (54%), Gaps = 21/599 (3%)
Query: 19 INQWNSQIRE-AVDKNEAHKALLLFRRMKKNDIE----PNNLTFPFIAKACAKLSDFLYS 73
+++W + IR A D N H A+ F+ + +N E ++ + + KAC +LS
Sbjct: 1 MSKWLTMIRRHASDANPFH-AISFFKAIPRNQRENAPLDDHFVYASLIKACNRLSAIREG 59
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR-LDCAYKLFDKMPDRDVASWNAMIVGF-- 130
+ IH H+++ ++ V +V +Y+ ++ + CA LFDK+P++ + + N MI GF
Sbjct: 60 RSIHCHVLRFGLDYNVNVLNALVYLYSSAEKSMGCACALFDKIPEKTIVTVNCMISGFVK 119
Query: 131 -----AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
A +G +VL +++R ++ ++VT++ L + S+ S+HS+
Sbjct: 120 NKRFHAGVGLFNRVLGGGFDLR---VKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTS 176
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+D V N I YA+ + A +F E +R +VSWN++I G + ++ +
Sbjct: 177 LDLKNEVRNALIHLYAEFEYMDAAAKLFH--ETNVRDLVSWNTMIAGYAKNNDCRNAFSL 234
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+R M D ++VSL+S+C L G+ VH+ G ++ + LI+MYSK
Sbjct: 235 FREMRIGNVECDRVSLVSLISACTNXRDLHMGKAVHAFIKVSGMEMMIHFETALINMYSK 294
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG I+ R +FD + D SW +MI GY + G EAL L+ +++ PD VT+L +
Sbjct: 295 CGSIELGRKVFDELADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGL 354
Query: 366 ISGCGQSGALELGKWFDNY-ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
IS C SG L G ++Y S L + ++CNALIDMY+KCGS+ A +F +P +
Sbjct: 355 ISACRSSGDLHQGIQINSYIESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRD 414
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
V+SWT++I G A+NGE EAL F +M + PN VTFL VL AC HAG ++KG ++
Sbjct: 415 VISWTSIIVGYAINGEGEEALLAFRKMGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYD 474
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
+M K Y + P++ H CM D+ R G L+EA FV+ MP++ +A +W L+ AC++H +
Sbjct: 475 IMCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMPVEPNAVVWRMLINACRVHGDF 534
Query: 545 EIGEYVAYRLFELE-PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+G + L +++ H +V +NI+A GRWD V R++M + K PG+S +
Sbjct: 535 NLGLNLVSGLIDVKTEHGPEDHVISSNIFAEAGRWDDVLQERSLMVAQKAVKLPGKSSI 593
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 307/595 (51%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + N++ +A L+ M++ IEP+ +T + +L IH H++
Sbjct: 108 WTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVI 167
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++ V ++VD Y K L A +LF M ++D ++N+++ G++ G E+ +
Sbjct: 168 KLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIE 227
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF + GI+ T L AA+ + VH F + +V V N + Y+
Sbjct: 228 LFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYS 287
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + + +F + E +S+N +I + +F +S + +R + + F
Sbjct: 288 KHDQVDEVGKLFYEMPE--LDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPF 345
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+LLS L GR +H I G + + V N L+ MY+KC A+ +FD +
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIAC 405
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
++ V WTAMIS Y QKG +E + +F M G D T S++ C ++ LG+
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G NV +AL+D Y+KCG + DA + F +PE+ VSW +I+ A NG
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
L+ F QM++ +P+ V+FL+VL AC+H GF+E+ +FN MT++Y+V P+ HY+
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTS 585
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-H 560
M D+L R G+ EA + MP + +W ++L +C+IH+N E+ + A RLF +E
Sbjct: 586 MVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLR 645
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
AAPY+ M+NIYA+ G+WD VA ++ M+ V+K P S V I +T F+ D
Sbjct: 646 DAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSAND 700
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/570 (24%), Positives = 261/570 (45%), Gaps = 43/570 (7%)
Query: 58 PFIAKACAKLSDFL-YSQMIHGHIV--KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK 114
P ++ ++++FL ++H H V + P + I + M+ + K +L A +LFD
Sbjct: 41 PNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISL-NMMISGHLKFGKLSKARELFDG 99
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
M +R SW +I G+ Q ++ L+ +MR GI+ D+VT++ L + +++
Sbjct: 100 MVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI 159
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+H+ I +G + ++ VCN+ + AY K + L +A +F+ + + V++NS++ G +
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN--KDTVTFNSLMTGYS 217
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
++++ + + G +P T +LLS+ V + G+ VH + F +V
Sbjct: 218 NEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V N L+ YSK +D LF M + +S+ +I+ YA G E+ LF ++
Sbjct: 278 VGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTR 337
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+++S S L +G+ A + G V NAL+DMY+KC +A+
Sbjct: 338 FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F + K+ V WT MI+ G+ E +++F M + ++ TF ++L+AC +
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457
Query: 475 FLEKGWGYFNL------MTKVYQVNPELNHYS---CMADLLGRKGKLKE----------- 514
+ G +L M+ VY + L+ Y+ CM D + G++ E
Sbjct: 458 SISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALIS 517
Query: 515 ----------ALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIGEY---VAYRLFELE 558
L+ Q M K D+ + ++L AC +E + +++E+
Sbjct: 518 AYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVT 577
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMM 588
P Y M ++ GR+D L T M
Sbjct: 578 PKREH-YTSMVDVLCRNGRFDEAEKLMTEM 606
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 139/272 (51%), Gaps = 13/272 (4%)
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV-INTLISMYSKC 306
H++ GF P+ + S+ L +G LVH+H + ++ +N +IS + K
Sbjct: 33 HIVKTGFNPN-----TCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKF 87
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + AR LFDGM +RT VSWT +I GY Q EA RL+ M G PD VT+++++
Sbjct: 88 GKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL 147
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
SG G+ + + G + N+MVCN+L+D Y K + A +LF + K V
Sbjct: 148 SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTV 207
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT---HAGFLEKGWGYF 483
++ +++ G + G EA++LF ++ ++P+ TF A+L A F ++ G+
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFV 267
Query: 484 ---NLMTKVYQVNPELNHYSCMADLLGRKGKL 512
N + V+ N L++YS D + GKL
Sbjct: 268 LKTNFVWNVFVGNALLDYYS-KHDQVDEVGKL 298
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 256/430 (59%), Gaps = 3/430 (0%)
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+D + + N ++ YAKC L A +F E + +V+W ++I G + ++ D+L
Sbjct: 119 LDNHLVLQNIIVNMYAKCGCLDDARRMFD--EMPTKDMVTWTALIAGFSQNNRPRDALLL 176
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M+ GF+P+ T+ SLL + L G +H+ + YG+ V V + L+ MY++
Sbjct: 177 FPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYAR 236
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG +D+A+ FDGM ++ VSW A+ISG+A+KG+ + AL L + M+ P T S+
Sbjct: 237 CGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+S C GALE GKW + GLK + N L+DMY+K GSI DA+ +F L + V
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW TM+ GCA +G E LD F QM+ + + PN ++FL VL AC+H+G L++G YF L
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M K Y+V P++ HY DLLGR G L A F++ MPI+ A +WG LL AC++H+N+E
Sbjct: 417 MKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNME 475
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+G Y A R FEL+PH + P + ++NIYA GRW VA +R MMK + VKK P S V I
Sbjct: 476 LGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIE 535
Query: 606 GKTCTFTVED 615
F D
Sbjct: 536 NAVHLFVAND 545
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 205/413 (49%), Gaps = 4/413 (0%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCD 103
+++ + P+ + + K C +L +++H H+V S F + + +Q +V+MYAKC
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
LD A ++FD+MP +D+ +W A+I GF+Q L LF M +G Q + T+ L +
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A+ L +H+F + G + V V + + YA+C + A+L F G+ ++
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP--TKSE 255
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWN++I G + + +L+ M F+P T S+LS+C AL QG+ VH+H
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAH 315
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
I G L + NTL+ MY+K G ID A+ +FD + VSW M++G AQ G E
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
L F M G P+ ++ L +++ C SG L+ G ++ ++ +V +D+
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDL 435
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G + A +P E T W ++ C ++ + + ELD
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELD 488
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 3/311 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N ALLLF +M + +PN+ T + KA +H +
Sbjct: 157 WTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCL 216
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + S ++V + +VDMYA+C +D A FD MP + SWNA+I G A+ G E L
Sbjct: 217 KYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALH 276
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L + M+ Q T + A L K VH+ I G+ + NT + YA
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYA 336
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + A+ VF + + VVSWN+++ GC ++L+ + M+ G P+ +
Sbjct: 337 KAGSIDDAKRVFDRLVKP--DVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFLFDGMC 320
+ +L++C L +G Y + DV T + + + G +D A RF+ +
Sbjct: 395 LCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPI 454
Query: 321 DRTRVSWTAMI 331
+ T W A++
Sbjct: 455 EPTAAVWGALL 465
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 195/601 (32%), Positives = 313/601 (52%), Gaps = 5/601 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W + N +A LFR+M ++ P+ +TF + C +H
Sbjct: 105 TVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVH 164
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCD--RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
VK F +++F+ V + + C+ RLD A LF+++ D+D ++N +I G+ + G
Sbjct: 165 AFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGL 224
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + LF MR G + T G+ +A + +L + +H + G D SV N
Sbjct: 225 YTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQ 284
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y+K + + +F + E VS+N +I + +++++SLN +R M GF
Sbjct: 285 ILHFYSKHDRVLETRNLFNEMPE--LDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFD 342
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
++LS +L GR VH I D + V N+L+ MY+KC D A +
Sbjct: 343 RRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELI 402
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + R+ VSWTA+ISGY QKG L+LF M A D T +++ +L
Sbjct: 403 FKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASL 462
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
LGK + G +NV + L+DMY+KCGSI DA ++F +P++ VSW +I+
Sbjct: 463 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAY 522
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A NG+ A+ F +M++ L+P+ V+ L VL AC+H GF+E+G +F M+ +Y + P+
Sbjct: 523 ADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPK 582
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
HY+CM DLLGR G+ EA + MP + D +W ++L AC+I++N + E A +LF
Sbjct: 583 KKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLF 642
Query: 556 ELEP-HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
+E AA YV M+NIYA G+W+ V +++ M+ +KK P S V +N K F+
Sbjct: 643 SMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSN 702
Query: 615 D 615
D
Sbjct: 703 D 703
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 21/499 (4%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+Y +M H + V + TM+ Y K L A LFD MPDR V +W ++ +
Sbjct: 66 VYDEMPHKNTVST---------NTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWY 116
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD- 189
A ++ LF M D+VT L A + + VH+F + +G D +
Sbjct: 117 AGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNL 176
Query: 190 -VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
++VCN + +Y + L +A ++F I + + V++N++I G + ++++ +
Sbjct: 177 FLTVCNVLLKSYCEVRRLDLACVLFEEILD--KDSVTFNTLITGYEKDGLYTEAIHLFLK 234
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G +P T +L + V G+ +H + GF D SV N ++ YSK
Sbjct: 235 MRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDR 294
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ R LF+ M + VS+ +IS Y+Q +E+L LF M+ G +M+S
Sbjct: 295 VLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSI 354
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
+L++G+ A + V N+L+DMY+KC +A +F +L +++ VSW
Sbjct: 355 AANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSW 414
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T +I+G G L LF +M +LR ++ TF VL+A AGF G L
Sbjct: 415 TALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKAS--AGFASLLLGK-QLHAF 471
Query: 489 VYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE- 545
+ + N + S + D+ + G +K+A+ + MP + +A W L+ A + + E
Sbjct: 472 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAYADNGDGEA 530
Query: 546 -IGEYVAYRLFELEPHSAA 563
IG + L+P S +
Sbjct: 531 AIGAFTKMIQSGLQPDSVS 549
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R V + I GF+ D N + + G + +A ++D M + VS MISGY +
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 338 GDL-------------------------------DEALRLFFAMEAAGEVPDLVTVLSMI 366
GDL DEA +LF M + +PD VT +++
Sbjct: 89 GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVM--VCNALIDMYSKCGSIGDARELFYALPEKT 424
GC + +A G N+ VCN L+ Y + + A LF + +K
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKD 208
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
V++ T+I G +G + EA+ LF +M + +P+ TF VL+A
Sbjct: 209 SVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 293/523 (56%), Gaps = 7/523 (1%)
Query: 98 MYAKCDRLDCAYK--LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQAD 154
+Y D D AY F + D S+N MI G + + FY+ M+ +G++ +
Sbjct: 67 LYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPN 126
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+T L A + + + H I G+D D V ++ I+ YA+C + A VF
Sbjct: 127 NLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFD 186
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I + + +VSWNS+I G + +++ +R M+ GF+P+ ++VS+L +C L
Sbjct: 187 EISQ--KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDL 244
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G V + L+ + + LI MY KCGD+ SAR +FD M + +V+W AMI+GY
Sbjct: 245 KLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGY 304
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
AQ G +EA++LF M + PD +T++ ++S C GAL+LGK + YA G +D+V
Sbjct: 305 AQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDV 364
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V AL+DMY+KCGS+ +A +FY +P K VSW MI+ A +G+ EAL LF MM
Sbjct: 365 YVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNE 424
Query: 455 --DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ PN +TF+ VL AC HAG +++G F++M+ + + P++ HYSCM DL R G L
Sbjct: 425 GGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHL 484
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIY 572
+EA DFV +MP K D I G LL AC+ +NI+I E V L ELEP ++ YV + +Y
Sbjct: 485 EEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLY 544
Query: 573 ALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A RWD A +R +MK+ V K PG S + IN + F D
Sbjct: 545 ANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGD 587
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 208/394 (52%), Gaps = 5/394 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N++ AL + RMK ++PNNLT+PF+ AC+ L +M H +++ D V
Sbjct: 106 NKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVS 165
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MYA+C ++ A K+FD++ +D+ SWN+MI G+++M + + LF M G Q
Sbjct: 166 HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ ++++ + A L L V F + + + + + I Y KC DL A +
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRI 285
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F +++ + V+WN++I G ++++ ++ M PD T++ +LS+C
Sbjct: 286 FDSMKK--KDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIG 343
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ V + GF DV V L+ MY+KCG +D+A +F GM ++ VSW AMIS
Sbjct: 344 ALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMIS 403
Query: 333 GYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGG 389
A G EAL LF +M E P+ +T + ++S C +G ++ G + F + S G
Sbjct: 404 ALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFG 463
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
L + + ++D++S+ G + +A + +PEK
Sbjct: 464 LVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 145/294 (49%), Gaps = 5/294 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I A +A+ LFR M + +PN ++ + AC +L D + +V
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + F+ + ++ MY KC L A ++FD M +D +WNAMI G+AQ G E+ +
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +MR+ D +T++G+ A L L K V + G DV V + YA
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDVT 259
KC L A VF G+ + VSWN++I + + ++L ++ M+ +G P+
Sbjct: 376 KCGSLDNAFRVFYGMPN--KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDI 433
Query: 260 TVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
T V +LS+CV + +G RL H +G + + ++ ++S+ G ++ A
Sbjct: 434 TFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 214/649 (32%), Positives = 331/649 (51%), Gaps = 92/649 (14%)
Query: 7 PPRLNKIYRSSTINQ----WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
PP + +ST+N + S +R + K +L+F M+ + P+ +P + K
Sbjct: 49 PPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIK 108
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDV 120
+ H H++K SD FV+ ++DMYA+ + A K+FD++PD R V
Sbjct: 109 SAGN-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKV 163
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
A WNAM+ G+ + + LF M
Sbjct: 164 ADWNAMVSGYWKWESEGQAQWLFDVM---------------------------------- 189
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ +V ++ YAK DL+ A F + E R+VVSWN+++ G +
Sbjct: 190 -----PERNVITWTAMVTGYAKVKDLEAARRYFDCMPE--RSVVSWNAMLSGYAQNGLAE 242
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCV-----CPEALVQGRLVHSHGIHYGFDLDVSV 295
+ L + M+ G PD TT V+++S+C C A + R +H I + ++
Sbjct: 243 EVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLV-RTLHQKQIQLNCFVRTAL 301
Query: 296 I----------------------------NTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
+ N +IS Y++ G++DSAR LF+ M R V+W
Sbjct: 302 LDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTW 361
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYAC 386
+MI+GYAQ G A+ LF M A ++ PD VT++S+IS CG GALELG W +
Sbjct: 362 NSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLT 421
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
+K ++ NA+I MYS+CGS+ DA+ +F + + VVS+ T+I+G A +G VEA++
Sbjct: 422 ENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAIN 481
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
L M E + P+RVTF+ VL AC+HAG LE+G F + +P ++HY+CM DLL
Sbjct: 482 LMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLL 536
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYV 566
GR G+L++A ++ MP++ AG++G+LL A +IH+ +E+GE A +LFELEP ++ ++
Sbjct: 537 GRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFI 596
Query: 567 EMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++NIYA GRW V +R MK+ VKK G S V GK F V D
Sbjct: 597 LLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVAD 645
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 221/508 (43%), Gaps = 91/508 (17%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDC----AYKLFDKMPDRDVASWNAM 126
L++Q+IH + +W + + C RL + LF+ + +V + +M
Sbjct: 20 LHAQIIHNSLHHHNYWVALLIN--------HCTRLRAPPHYTHLLFNSTLNPNVFVFTSM 71
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+ ++ + KV+ +F +M+ G++ D L ++A + H+ + +G
Sbjct: 72 LRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGG-----IGFHAHVLKLGH 126
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
+D V N I YA+ + A VF I + R V WN+++ G + +
Sbjct: 127 GSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQA---- 182
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
++D V PE +V +++ Y+K
Sbjct: 183 -QWLFD----------------VMPER------------------NVITWTAMVTGYAKV 207
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
D+++AR FD M +R+ VSW AM+SGYAQ G +E LRLF M AG PD T +++I
Sbjct: 208 KDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVI 267
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG--------------- 411
S C G L ++ N V AL+DMY+KCGSIG
Sbjct: 268 SACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNS 327
Query: 412 -----------------DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
ARELF +P + VV+W +MIAG A NG+ A++LF +M+
Sbjct: 328 VTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 387
Query: 455 -DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
L P+ VT ++V+ AC H G LE G +T+ Q+ ++ ++ M + R G ++
Sbjct: 388 KKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE-NQIKLSISGHNAMIFMYSRCGSME 446
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIH 541
+A Q M + D + TL+ H
Sbjct: 447 DAKRVFQEMATR-DVVSYNTLISGFAAH 473
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 317/595 (53%), Gaps = 6/595 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + + +A+ L+ RM ++P+ TFP + + C + D + +H H+
Sbjct: 163 WNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV 222
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + DI V ++ MY KC + A LFD+MP RD+ SWNAMI G+ + G + L
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL 282
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF+ MR + + D +T+ + A L + +H++ I G D+SVCN+ Y
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+ AE +F +E + +VSW ++I G Y D +++ YR M D +PD T
Sbjct: 343 LNAGSWREAEKLFSRMER--KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V ++LS+C L G +H I V V N LI+MYSKC ID A +F +
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SWT++I+G EAL M+ + P+ +T+ + ++ C + GAL GK
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ-PNAITLTAALAACARIGALMCGKE 519
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G+ + + NAL+DMY +CG + A F + +K V SW ++ G + G+
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQ 578
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
++LF +M++ +RP+ +TF+++L C+ + + +G YF+ M Y V P L HY+
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYA 637
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR G+L+EA F+Q MP+ D +WG LL AC+IH I++GE A +FEL+
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
S Y+ + N+YA G+W VA +R MMK N + G S V + GK F +D
Sbjct: 698 SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD 752
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 220/429 (51%), Gaps = 35/429 (8%)
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLS-----LLKSVHSF 180
G G LE+ + L +M+ + + D FV ++ L + + S L S+ S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
G+ +G N +++ + + +L A VF + E R + SWN ++GG FD
Sbjct: 128 GVELG--------NAFLAMFVRFGNLVDAWYVFGKMSE--RNLFSWNVLVGGYAKQGYFD 177
Query: 241 DSLNFYRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+++ Y M++ G +PDV T +L +C L +G+ VH H + YG++LD+ V+N L
Sbjct: 178 EAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL 237
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
I+MY KCGD+ SAR LFD M R +SW AMISGY + G E L LFFAM PDL
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+T+ S+IS C G LG+ Y + G ++ VCN+L MY GS +A +LF
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ K +VSWTTMI+G N +A+D + M + ++P+ +T AVL AC G L+ G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 480 WGYFNLMTK------VYQVNPELNHYSCMADLLGRKGK-LKEALDFVQSMPIKSDAGIWG 532
L K V N +N YS K K + +ALD ++P K+ W
Sbjct: 418 VELHKLAIKARLISYVIVANNLINMYS--------KCKCIDKALDIFHNIPRKNVIS-WT 468
Query: 533 TLLCACKIH 541
+++ +++
Sbjct: 469 SIIAGLRLN 477
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 224/441 (50%), Gaps = 11/441 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFV 156
M+ + L A+ +F KM +R++ SWN ++ G+A+ G+ ++ +CL++ M V G++ D
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + + L+ K VH + G + D+ V N I+ Y KC D+K A L+F +
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R ++SWN++I G + L + M PD+ T+ S++S+C
Sbjct: 258 PR--RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +H++ I GF +D+SV N+L MY G A LF M + VSWT MISGY
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
D+A+ + M+ PD +TV +++S C G L+ G A L V+V
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N LI+MYSKC I A ++F+ +P K V+SWT++IAG LN EAL +F + M++ L
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTL 494
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKE 514
+PN +T A L AC G L G + V + L+ + + + D+ R G++
Sbjct: 495 QPNAITLTAALAACARIGALMCG---KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 515 ALDFVQSMPIKSDAGIWGTLL 535
A S K D W LL
Sbjct: 552 AWSQFNSQ--KKDVTSWNILL 570
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 197/421 (46%), Gaps = 5/421 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I + H+ L LF M+ ++P+ +T + AC L D + IH
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ + F DI V ++ MY A KLF +M +D+ SW MI G+ +K
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ + M ++ D +TV + A L +H I + + V V N I+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC + A +F I + V+SW SII G ++ ++L F R M +P+
Sbjct: 442 MYSKCKCIDKALDIFHNIPR--KNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNA 498
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ + L++C AL+ G+ +H+H + G LD + N L+ MY +CG +++A F+
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 558
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ SW +++GY+++G + LF M + PD +T +S++ GC +S + G
Sbjct: 559 Q-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
+ + G+ N+ ++D+ + G + +A + +P W ++ C +
Sbjct: 618 LMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 438 N 438
+
Sbjct: 678 H 678
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 307/595 (51%), Gaps = 40/595 (6%)
Query: 56 TFPFIA--KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY--KL 111
T P I+ + C + Q +H +K ++ +Q ++ + D Y +L
Sbjct: 39 THPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 95
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
FD++P+ ++ WN MI G++++ F + + L+ M G++ D T L + L
Sbjct: 96 FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 155
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ +H + G+ +V V + Y C L A VF + V++WN II
Sbjct: 156 EYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA--DVITWNMIIS 213
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
KF++S + M P T+V +LS+C + L G+ VHS+ + +
Sbjct: 214 AYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 273
Query: 292 DVSVINTLISMYSKCGDIDSA-------------------------------RFLFDGMC 320
++ + N +I MY+ CG++DSA R FD M
Sbjct: 274 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP 333
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ VSWTAMI GY + EAL LF M+A PD T++S+++ C GALELG+W
Sbjct: 334 EKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEW 393
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y +K+++ V NALIDMY KCG + A +F + ++ +WT MI G A+NG
Sbjct: 394 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 453
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+ALD+F M++ + P+ +T++ VL ACTH G ++KG YF MT + + P + HY
Sbjct: 454 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 513
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R G+LKEA + +++MPIK+++ +WG LL C+++R ++ E V ++ ELEP
Sbjct: 514 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 573
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ A YV + NIYA RW+ + LR MM +KK PG SL+ +NG+ F D
Sbjct: 574 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGD 628
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 229/467 (49%), Gaps = 35/467 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR + + L+ M + ++P+ TFPF+ K + Y + +HGH++
Sbjct: 107 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 166
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++FV T +V MY C +LD A +FD P DV +WN +I + ++G E+
Sbjct: 167 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 226
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M + VT++ + A K L K VHS+ + V++++ + N I YA
Sbjct: 227 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 286
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT----------YGDK------------- 238
C ++ A +FR + R ++SW +I+ G T Y DK
Sbjct: 287 DCGEMDSALGIFRSMNN--RDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMI 344
Query: 239 --------FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
F ++L +R+M +PD T+VS+L++C AL G + ++
Sbjct: 345 DGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK 404
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+ V N LI MY KCGD+D A +F M R + +WTAMI G A G ++AL +F M
Sbjct: 405 NDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM 464
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
A +PD +T + ++S C +G ++ G K+F G++ N+ L+D+ ++ G
Sbjct: 465 LKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGR 524
Query: 410 IGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +A E+ +P K + W ++AGC + E A + Q++EL+
Sbjct: 525 LKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 571
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 194/574 (33%), Positives = 304/574 (52%), Gaps = 4/574 (0%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
F + ++ I+PN ++ + A L D ++ IH + VK S + +VD Y K
Sbjct: 249 FWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGK 308
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C + +++F++ +++ SWN++I G A G L F M G Q + VT+ +
Sbjct: 309 CGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSI 368
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+ + K +H F + +G + D+ + N+ I YAK A +F ++ R
Sbjct: 369 LPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDR--R 426
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+VSWN++I +++ F M G P+ T ++L +C L G+ +H
Sbjct: 427 NIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIH 486
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ G+ G D+ V N+LI MY+KCG + SAR +F+ + VS+ +I GY++ D
Sbjct: 487 AMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCL 545
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
++L LF M G+ PD+V+ + +IS C AL+ GK A L ++ V N+L+
Sbjct: 546 QSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLL 605
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
D Y+KCG I A LF + K V SW TMI G + GE A+ +F M + ++ + V
Sbjct: 606 DFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLV 665
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
+++AVL AC+H G +E+GW YF+ M ++ P HY+CM DLLGR G ++EA +Q
Sbjct: 666 SYIAVLSACSHGGLVERGWQYFSEML-AQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQ 724
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
+PI DA IWG LL AC+I+ N+E+G A LFEL+P Y+ ++NIYA GRWD
Sbjct: 725 LPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEA 784
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R +MK KK PG S V I + F E+
Sbjct: 785 NKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEE 818
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 242/460 (52%), Gaps = 5/460 (1%)
Query: 22 WNSQIR-EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ IR ++ N + RM + ++ ++ TFPF+ K C+ D +HG +
Sbjct: 126 WNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVV 185
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG-FLEKV 139
K F +D++V T++ +Y C L+ A +LFD+MP+RDV SWN +I + G + E
Sbjct: 186 FKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEAR 245
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
F+ + I+ + V+V+ L + + + + +H + + +G+D+ V+ CN + A
Sbjct: 246 NYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDA 305
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC +K VF E + VSWNSII G + D+LN +R MI G +P+
Sbjct: 306 YGKCGSVKALWQVFNETVE--KNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSV 363
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ S+L V E G+ +H + G + D+ + N+LI MY+K G A +F +
Sbjct: 364 TISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNL 423
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R VSW AMI+ YA EA+R M+ GE P+ VT +++ C + G L GK
Sbjct: 424 DRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGK 483
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
GL ++ V N+LIDMY+KCG + AR +F K VS+ +I G +
Sbjct: 484 EIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETD 542
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ +++L+LF +M L +P+ V+F+ V+ AC + L++G
Sbjct: 543 DCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG 582
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 223/493 (45%), Gaps = 25/493 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I K AL FR M +PN++T I +L F + IHG +
Sbjct: 330 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 389
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +DIF+ +++DMYAK A +F + R++ SWNAMI +A + +
Sbjct: 390 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 449
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
M+ G + VT + A L K +H+ G+ IG+ +D+ V N+ I YA
Sbjct: 450 FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYA 509
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + VS+N +I G + D SLN + M G +PDV +
Sbjct: 510 KCGCLHSARNVF---NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 566
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V ++S+C AL QG+ VH + + V N+L+ Y+KCG ID A LF+ +
Sbjct: 567 VGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILF 626
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ SW MI GY G+L+ A+ +F AM DLV+ ++++S C G +E G +
Sbjct: 627 KDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQY 686
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGE 440
+ + L+ M ++D+ + G + +A +L LP + W ++ C + G
Sbjct: 687 FSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGN 746
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+EL R F Q C GY+ L++ +Y + +
Sbjct: 747 -----------VELGRRAAEHLFELKPQHC----------GYYILLSNIYAETGRWDEAN 785
Query: 501 CMADLLGRKGKLK 513
+ +L+ +G K
Sbjct: 786 KIRELMKSRGAKK 798
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 199/422 (47%), Gaps = 9/422 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDV 120
C+K+ L ++ +H + + F + + +++ YAK LF++ R
Sbjct: 64 CSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTA 123
Query: 121 ASWNAMIVG--FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
WN +I A G + + M G+Q D T + + + + VH
Sbjct: 124 FLWNTLIRAHSIAWNGTFDG-FETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVH 182
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+G D DV V NT + Y C L A +F + E R VVSWN+IIG +
Sbjct: 183 GVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPE--RDVVSWNTIIGLLSVNGD 240
Query: 239 FDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+ ++ N+Y MI +P++ +V+SLL E R +H + + G D V+ N
Sbjct: 241 YTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCN 300
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ Y KCG + + +F+ ++ VSW ++I+G A KG +AL F M AG P
Sbjct: 301 ALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQP 360
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+ VT+ S++ + + GK ++ G + ++ + N+LIDMY+K G +A +F
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIF 420
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ L + +VSW MIA ALN +EA+ QM E PN VTF VL AC GFL
Sbjct: 421 HNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 478 KG 479
G
Sbjct: 481 PG 482
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 163/366 (44%), Gaps = 45/366 (12%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN+ I +A+ +M++ PN +TF + ACA+L + IH
Sbjct: 427 NIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIH 486
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
V+ SD+FV +++DMYAKC L A +F+ +D S+N +I+G+++
Sbjct: 487 AMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCL 545
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF MRL+G + D V+ +G+ A + L K VH + + + + V N+ +
Sbjct: 546 QSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLL 605
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + +A +F I + V SWN++I G + + +++ + M D + D
Sbjct: 606 DFYTKCGRIDIACRLFNQIL--FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYD 663
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ + +++LS+C SHG G ++ F
Sbjct: 664 LVSYIAVLSAC-------------SHG----------------------GLVERGWQYFS 688
Query: 318 GM----CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
M + T + +T M+ + G ++EA +L + A PD +++ C G
Sbjct: 689 EMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIA---PDANIWGALLGACRIYG 745
Query: 374 ALELGK 379
+ELG+
Sbjct: 746 NVELGR 751
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 194/574 (33%), Positives = 304/574 (52%), Gaps = 4/574 (0%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
F + ++ I+PN ++ + A L D ++ IH + VK S + +VD Y K
Sbjct: 100 FWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGK 159
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C + +++F++ +++ SWN++I G A G L F M G Q + VT+ +
Sbjct: 160 CGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSI 219
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+ + K +H F + +G + D+ + N+ I YAK A +F ++ R
Sbjct: 220 LPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDR--R 277
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+VSWN++I +++ F M G P+ T ++L +C L G+ +H
Sbjct: 278 NIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIH 337
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ G+ G D+ V N+LI MY+KCG + SAR +F+ + VS+ +I GY++ D
Sbjct: 338 AMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCL 396
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
++L LF M G+ PD+V+ + +IS C AL+ GK A L ++ V N+L+
Sbjct: 397 QSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLL 456
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
D Y+KCG I A LF + K V SW TMI G + GE A+ +F M + ++ + V
Sbjct: 457 DFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLV 516
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
+++AVL AC+H G +E+GW YF+ M ++ P HY+CM DLLGR G ++EA +Q
Sbjct: 517 SYIAVLSACSHGGLVERGWQYFSEML-AQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQ 575
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
+PI DA IWG LL AC+I+ N+E+G A LFEL+P Y+ ++NIYA GRWD
Sbjct: 576 LPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEA 635
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R +MK KK PG S V I + F E+
Sbjct: 636 NKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEE 669
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 232/436 (53%), Gaps = 4/436 (0%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M + ++ ++ TFPF+ K C+ D +HG + K F +D++V T++ +Y C
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQ 163
L+ A +LFD+MP+RDV SWN +I + G + ++ M L I+ + V+V+ L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
+ + + + +H + + +G+D+ V+ CN + AY KC +K VF E +
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVE--KNE 178
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWNSII G + D+LN +R MI G +P+ T+ S+L V E G+ +H
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ G + D+ + N+LI MY+K G A +F + R VSW AMI+ YA EA
Sbjct: 239 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+R M+ GE P+ VT +++ C + G L GK GL ++ V N+LIDM
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDM 358
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y+KCG + AR +F K VS+ +I G + + +++L+LF +M L +P+ V+F
Sbjct: 359 YAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417
Query: 464 LAVLQACTHAGFLEKG 479
+ V+ AC + L++G
Sbjct: 418 VGVISACANLAALKQG 433
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 223/493 (45%), Gaps = 25/493 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I K AL FR M +PN++T I +L F + IHG +
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +DIF+ +++DMYAK A +F + R++ SWNAMI +A + +
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
M+ G + VT + A L K +H+ G+ IG+ +D+ V N+ I YA
Sbjct: 301 FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYA 360
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + VS+N +I G + D SLN + M G +PDV +
Sbjct: 361 KCGCLHSARNVF---NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V ++S+C AL QG+ VH + + V N+L+ Y+KCG ID A LF+ +
Sbjct: 418 VGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILF 477
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ SW MI GY G+L+ A+ +F AM DLV+ ++++S C G +E G +
Sbjct: 478 KDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQY 537
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGE 440
+ + L+ M ++D+ + G + +A +L LP + W ++ C + G
Sbjct: 538 FSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGN 597
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+EL R F Q C GY+ L++ +Y + +
Sbjct: 598 -----------VELGRRAAEHLFELKPQHC----------GYYILLSNIYAETGRWDEAN 636
Query: 501 CMADLLGRKGKLK 513
+ +L+ +G K
Sbjct: 637 KIRELMKSRGAKK 649
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 163/366 (44%), Gaps = 45/366 (12%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN+ I +A+ +M++ PN +TF + ACA+L + IH
Sbjct: 278 NIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIH 337
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
V+ SD+FV +++DMYAKC L A +F+ +D S+N +I+G+++
Sbjct: 338 AMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCL 396
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF MRL+G + D V+ +G+ A + L K VH + + + + V N+ +
Sbjct: 397 QSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLL 456
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + +A +F I + V SWN++I G + + +++ + M D + D
Sbjct: 457 DFYTKCGRIDIACRLFNQIL--FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYD 514
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ + +++LS+C SHG G ++ F
Sbjct: 515 LVSYIAVLSAC-------------SHG----------------------GLVERGWQYFS 539
Query: 318 GM----CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
M + T + +T M+ + G ++EA +L + A PD +++ C G
Sbjct: 540 EMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIA---PDANIWGALLGACRIYG 596
Query: 374 ALELGK 379
+ELG+
Sbjct: 597 NVELGR 602
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 320/595 (53%), Gaps = 6/595 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + + +A+ L+ RM ++P+ TFP + + C + D + +H H+
Sbjct: 163 WNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHV 222
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + DI V ++ MY KC + A LFD+MP RD+ SWNAMI G+ + G + L
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGL 282
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF+ MR + + D +T+ + A L + +H++ I G D+SVCN+ Y
Sbjct: 283 KLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+ AE +F ++ + +VSW ++I G Y + +++ YR M D +PD T
Sbjct: 343 LYAGSWREAEKLFSRMD--CKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEIT 400
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V ++LS+C L G +H I V V N LI+MYSKC ID A +F +
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SWT++I+G EAL F M+ + P+ +T+ + ++ C + GAL GK
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTLQ-PNAITLTAALAACARIGALMCGKE 519
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G+ + + NAL+DMY +CG + A F + +K V SW ++ G + G+
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQ 578
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
++LF +M++ +RP+ +TF+++L C + + +G YF+ M + Y V P L HY+
Sbjct: 579 GSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEE-YGVTPNLKHYA 637
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR G+L+EA F+Q MP+ D +WG LL AC+IH NI++GE A R+FEL+
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKG 697
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
S Y+ + N+YA G+W VA +R MMK N + G S V + GK F +D
Sbjct: 698 SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD 752
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 214/420 (50%), Gaps = 17/420 (4%)
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G G LE+ + L +M+ + + D + L + + V+S +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
V + N +++ + + +L A VF + E R + SWN ++GG FD+++ Y
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSE--RNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 249 MIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M++ G +PDV T +L +C L +GR VH H + YG++LD+ V+N LI+MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
D+ SAR LFD M R +SW AMISGY + G E L+LFFAM PDL+T+ S+IS
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C G LG+ Y + G ++ VCN+L MY GS +A +LF + K +VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WTTMI+G N +A+D + M + ++P+ +T AVL AC G L+ G L
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 488 K------VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
K V N +N YS + + +ALD ++P K+ W +++ +++
Sbjct: 426 KARLISYVIVANNLINMYS-------KCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLN 477
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 224/441 (50%), Gaps = 11/441 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFV 156
M+ + L A+ +F KM +R++ SWN ++ G+A+ G+ ++ +CL++ M V G++ D
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVY 197
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + + L+ + VH + G + D+ V N I+ Y KC D+K A L+F +
Sbjct: 198 TFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R ++SWN++I G + L + M PD+ T+ S++S+C
Sbjct: 258 PR--RDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +H++ I GF +D+SV N+L MY G A LF M + VSWT MISGY
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEY 375
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
++A+ + M+ PD +TV +++S C G L+ G A L V+V
Sbjct: 376 NFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N LI+MYSKC I A ++F+ +P K V+SWT++IAG LN EAL F Q M++ L
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQ-MKMTL 494
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKE 514
+PN +T A L AC G L G + V + L+ + + + D+ R G++
Sbjct: 495 QPNAITLTAALAACARIGALMCG---KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNI 551
Query: 515 ALDFVQSMPIKSDAGIWGTLL 535
A + S K D W LL
Sbjct: 552 AWNQFNSQ--KKDVSSWNILL 570
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 198/421 (47%), Gaps = 5/421 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I + H+ L LF M+ ++P+ +T + AC L D + IH
Sbjct: 262 IISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ + F DI V ++ MY A KLF +M +D+ SW MI G+ EK
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEK 381
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ + M ++ D +TV + A L +H I + + V V N I+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC + A +F I + V+SW SII G ++ ++L F+R M +P+
Sbjct: 442 MYSKCKCIDKALDIFHNIPR--KNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNA 498
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ + L++C AL+ G+ +H+H + G LD + N L+ MY +CG ++ A F+
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS 558
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ SW +++GY+++G + LF M A PD +T +S++ GCG+S + G
Sbjct: 559 Q-KKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQG 617
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
+ + G+ N+ ++D+ + G + +A + +P W ++ C +
Sbjct: 618 LMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 438 N 438
+
Sbjct: 678 H 678
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/531 (36%), Positives = 296/531 (55%), Gaps = 6/531 (1%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
++F T++ YAK ++ A++LFD+MP D S+N +I +A+ G + LF MR
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+ D T+ G+ A ++ L++ +H+ + G+D+ VSV N I++Y+K LK
Sbjct: 133 EAFLDMDGFTLSGIITAC--GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A +F + E R VSWNS++ + +L Y M G D+ T+ S+L++
Sbjct: 191 EARRIFHWLSED-RDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRVS 326
+ L+ G H+ I G+ + V + LI +YSKCG + R +FD + + V
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309
Query: 327 WTAMISGYAQKGDL-DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W MISGY+ DL DEAL F ++ G PD +++ +IS C + G+ A
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369
Query: 386 CSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
+ N + V NALI MYSKCG++ DA+ LF +PE VS+ +MIAG A +G ++
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L LF +M+E+ P +TF++VL AC H G +E G YFN+M + + + PE H+SCM D
Sbjct: 430 LHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMID 489
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
LLGR GKL EA ++++P W LL AC+IH N+E+ A RL +L+P +AAP
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP 549
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV +ANIY+ GR A++R +M+ VKK PG S + +N + F ED
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAED 600
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 161/330 (48%), Gaps = 9/330 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + E KAL L+ M + + T + A + D L H ++
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLI 267
Query: 82 KSPFWSDIFVQTTMVDMYAKCD--RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL-EK 138
KS + + V + ++D+Y+KC LDC K+FD++ + D+ WN MI G++ L ++
Sbjct: 268 KSGYHQNSHVGSGLIDLYSKCGGCMLDCR-KVFDEISNPDLVLWNTMISGYSLYEDLSDE 326
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 197
L F +++VG + D +++ + A + S + VH + + + ++ +SV N I
Sbjct: 327 ALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALI 386
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y+KC +L+ A+ +F + E VS+NS+I G SL+ ++ M+ GF P
Sbjct: 387 AMYSKCGNLRDAKTLFDTMPE--HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPT 444
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHS-HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T +S+L++C + G++ + +G + + + +I + + G + A L
Sbjct: 445 NITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLI 504
Query: 317 DGMC-DRTRVSWTAMISGYAQKGDLDEALR 345
+ + D W+A++ G+++ A++
Sbjct: 505 ETIPFDPGFFFWSALLGACRIHGNVELAIK 534
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 14/277 (5%)
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D +V NTLIS Y+K ++ A LFD M VS+ +I+ YA++GD A +LF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M A D T+ +I+ CG + + L + + GL V V NALI YSK G
Sbjct: 131 MREAFLDMDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 410 IGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+ +AR +F+ L E + VSW +M+ + E +AL+L+ +M L + T +VL
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 469 ACTHAGFLEKGWGYF-NLMTKVYQVNPELNHYSCMADLLGRKG----KLKEALDFVQSMP 523
A T+ L G + L+ Y N + S + DL + G ++ D + +
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVG--SGLIDLYSKCGGCMLDCRKVFDEISN-- 304
Query: 524 IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
D +W T++ ++ ++ +R ++ H
Sbjct: 305 --PDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGH 339
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 309/573 (53%), Gaps = 21/573 (3%)
Query: 57 FPFIAKACAKL-------SDFLYSQMIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCA 108
+P + C L F Q +H H++ S ++ ++ T + YA C + A
Sbjct: 55 YPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQA 114
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+FD + ++ WN MI G+A G K L L+ M G +AD T + +A
Sbjct: 115 EVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDL 174
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ + + VHS + G+++D+ V N+ ++ YAK D+ A +VF + E R + SWN+
Sbjct: 175 LLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE--RDLTSWNT 232
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYD-----GFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
+I G Y D F +++D G D TT++ LLS+C +A+ +G+++H +
Sbjct: 233 MISG--YAKNADSGTAF---LVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGY 287
Query: 284 GIHYGF-DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+ + + N+LI MY C + AR LF+ + + VSW +MI GYA+ GD E
Sbjct: 288 AVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFE 347
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
+LRLF M G PD VT ++++ C Q AL G +Y G N +V AL+D
Sbjct: 348 SLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVD 407
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MYSKCGS+ +R +F +P+K++VSW+ M+AG L+G EA+ + M + P+
Sbjct: 408 MYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGV 467
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F ++L AC+HAG + +G F M K Y V P L+HYSCM DLLGR G L EA +++M
Sbjct: 468 FTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTM 527
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
IK + IW LL A ++H+NI++ E A ++F++ P + Y+ ++NIYA RWD V
Sbjct: 528 EIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVE 587
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R M++R +KK PG S + ++ F V D
Sbjct: 588 RVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGD 620
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 208/421 (49%), Gaps = 7/421 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR K+L+L+R M +N T+PF+ KAC L + +H +V
Sbjct: 129 WNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVV 188
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
SDI+V +++ MYAK + A +FD+M +RD+ SWN MI G+A+
Sbjct: 189 VCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFL 248
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISAY 200
+F M G+ AD T++GL A K + K +H + + + + + N+ I Y
Sbjct: 249 VFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMY 308
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNS-IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
CN + A +F + + VSWNS I+G GD F +SL +R M DG PD
Sbjct: 309 CNCNCMVDARRLFERVR--WKDTVSWNSMILGYARNGDAF-ESLRLFRRMALDGSGPDQV 365
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T +++L +C AL G +HS+ + GFD + V L+ MYSKCG + +R +FD M
Sbjct: 366 TFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEM 425
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
D++ VSW+AM++GY G EA+ + M+A +PD S++S C +G + GK
Sbjct: 426 PDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGK 485
Query: 380 -WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCAL 437
F +K + + ++D+ + G + +A + + K T W ++ L
Sbjct: 486 EIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRL 545
Query: 438 N 438
+
Sbjct: 546 H 546
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 152/318 (47%), Gaps = 5/318 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ I ++ A L+F M K + + T + ACA L ++IHG
Sbjct: 227 LTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHG 286
Query: 79 HIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ V++ + + F ++++MY C+ + A +LF+++ +D SWN+MI+G+A+ G
Sbjct: 287 YAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAF 346
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF M L G D VT + + A L S+HS+ + G DA+ V +
Sbjct: 347 ESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALV 406
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC L + VF + + +++VSW++++ G + ++++ M + PD
Sbjct: 407 DMYSKCGSLACSRRVFDEMPD--KSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPD 464
Query: 258 VTTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
S+LS+C +V+G+ + + Y +S + ++ + + G +D A +
Sbjct: 465 NGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVII 524
Query: 317 DGM-CDRTRVSWTAMISG 333
M T W A+++
Sbjct: 525 RTMEIKPTSDIWAALLTA 542
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 320/573 (55%), Gaps = 17/573 (2%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL RM + + +T + C+ F++ +H I+K ++FV ++
Sbjct: 160 ALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALIT 219
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF--LEKVLCLFYNMRLVGIQADF 155
MY++C RL A ++FD+M ++D+ SWNAM+ G+AQ G LE +L +F M G++ D
Sbjct: 220 MYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAIL-VFLEMLKEGMKLDH 278
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
V+ G A H K L + +HS + IG D V VCN IS Y+KC D++ A+LVF
Sbjct: 279 VSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFES 338
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
I + R VVSW ++I +D+ + + M DG P+ T V L+ + +
Sbjct: 339 IID--RNVVSWTTMISISE-----EDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVE 391
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
+G+++H + F +++V N+LI+MY+K + + +F+ + R +SW ++ISGYA
Sbjct: 392 EGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYA 451
Query: 336 QKGDLDEALRLFFA--MEAAGEVPDLVTVLSMISGCGQSGALEL--GKWFDNYACSGGLK 391
Q G EAL+ F + ME+ P+ T S++S + A+ + G+ ++ GL
Sbjct: 452 QNGLWQEALQTFLSALMESR---PNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLN 508
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
N +V +AL+DMY+K GSI ++ +F P K V+WT +I+ A +G++ ++LF M
Sbjct: 509 TNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDM 568
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
++P+ +TFLAV+ AC G ++ G+ FN M K + + P HYS M D+LGR G+
Sbjct: 569 EREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGR 628
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANI 571
LKEA +FV +P + + +LL AC+IH N+++ + VA L E+EP + YV M+N+
Sbjct: 629 LKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNL 688
Query: 572 YALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
YA G W+ VA +R M+ V+K G S V +
Sbjct: 689 YAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDV 721
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 258/537 (48%), Gaps = 26/537 (4%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPN--NLTFPFIAKACAKLSDFLYSQ 74
+TI N + A+ +N + +AL LF++ + N +T + KAC D
Sbjct: 41 TTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACC--GDSKLGC 98
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH + S F S + V ++++MY K D A +F+ + + D+ SWN ++ GF +
Sbjct: 99 QIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS- 157
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSV 192
+ L M G+ D VT T A + H + +HS + G+D +V V
Sbjct: 158 --DDALNFALRMNFTGVAFDAVTCT--TVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIY 251
N I+ Y++C L A VF + + +VSWN+++ G G+ +++ + M+
Sbjct: 214 GNALITMYSRCCRLVEARRVFDEMRN--KDLVSWNAMLSGYAQEGNSGLEAILVFLEMLK 271
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G + D + +S+C + GR +HS + G+D V V N LIS YSKC DI+
Sbjct: 272 EGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIED 331
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A+ +F+ + DR VSWT MIS + +A LF M G P+ VT + +I
Sbjct: 332 AKLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRRDGVYPNDVTFVGLIHAITM 386
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
+E G+ + V N+LI MY+K S+ D+ ++F L + ++SW ++
Sbjct: 387 KNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSL 446
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG---YFNLMTK 488
I+G A NG + EAL F + ++ RPN TF +VL + A + G + +++
Sbjct: 447 ISGYAQNGLWQEALQTFLSAL-MESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKL 505
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
NP ++ S + D+ ++G + E+L P+K++ W ++ A H + E
Sbjct: 506 GLNTNPIVS--SALLDMYAKRGSICESLGVFSETPLKNEVA-WTAIISAHARHGDYE 559
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 192/374 (51%), Gaps = 15/374 (4%)
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI--QADFVTVMGLTQAAI 166
++ D+ P +AS N ++ + + L LF G D VTV + +A
Sbjct: 32 HQPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACC 91
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
L +H+F I G + V+V N+ ++ Y K A +VF + +VSW
Sbjct: 92 GDSKLGC--QIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNP--DIVSW 147
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N+++ G + DD+LNF M + G D T ++L+ C E + G +HS +
Sbjct: 148 NTVLSGF---QRSDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILK 204
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-EALR 345
G D +V V N LI+MYS+C + AR +FD M ++ VSW AM+SGYAQ+G+ EA+
Sbjct: 205 CGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAIL 264
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
+F M G D V+ IS CG ELG+ + A G +V VCN LI YS
Sbjct: 265 VFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYS 324
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KC I DA+ +F ++ ++ VVSWTTMI +++ E +A LF++M + PN VTF+
Sbjct: 325 KCEDIEDAKLVFESIIDRNVVSWTTMI---SISEE--DATSLFNEMRRDGVYPNDVTFVG 379
Query: 466 VLQACTHAGFLEKG 479
++ A T +E+G
Sbjct: 380 LIHAITMKNLVEEG 393
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 223/446 (50%), Gaps = 13/446 (2%)
Query: 15 RSSTINQWNSQIRE-AVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
R+ + WN+ + A + N +A+L+F M K ++ ++++F AC +F
Sbjct: 238 RNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELG 297
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH VK + + + V ++ Y+KC+ ++ A +F+ + DR+V SW MI ++
Sbjct: 298 RQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMI-SISE- 355
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
E LF MR G+ + VT +GL A + + +H + ++++V
Sbjct: 356 ---EDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVS 412
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N+ I+ YAK + + VF E R ++SWNS+I G + ++L + + +
Sbjct: 413 NSLITMYAKFESMSDSMKVFE--ELNYREIISWNSLISGYAQNGLWQEALQTFLSALMES 470
Query: 254 FRPDVTTVVSLLSSCVCPEALV--QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
RP+ T S+LSS EA+ G+ HSH + G + + V + L+ MY+K G I
Sbjct: 471 -RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICE 529
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ +F + V+WTA+IS +A+ GD + + LF ME G PD +T L++I+ CG+
Sbjct: 530 SLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGR 589
Query: 372 SGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WT 429
G ++ G + F++ ++ + ++++DM + G + +A E +P +S
Sbjct: 590 KGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQ 649
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD 455
+++ C ++G A + ++E++
Sbjct: 650 SLLGACRIHGNVDMAKRVADDLIEME 675
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/554 (35%), Positives = 304/554 (54%), Gaps = 12/554 (2%)
Query: 71 LYSQMIHGHIVKSPFWS----DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
LYS+ ++ F+S ++F +V YAK ++ A +LFD++P D S+N +
Sbjct: 52 LYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTL 111
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I G+A + LF MR +G + D T+ GL A + L+K +H F + G
Sbjct: 112 ISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGF 169
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D+ SV N +++ Y+K L+ A VF G++E LR VSWNS+I + +L Y
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE-LRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
+ MI+ GF+ D+ T+ S+L++ + L+ GR H I GF + V + LI YSKC
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKC 288
Query: 307 GDIDS---ARFLFDGMCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEVPDLVTV 362
G D + +F + V W MISGY+ +L +EA++ F M+ G PD +
Sbjct: 289 GGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF 348
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALP 421
+ + S C + K A + N + V NALI +Y K G++ DAR +F +P
Sbjct: 349 VCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
E VS+ MI G A +G EAL L+ +M++ + PN++TF+AVL AC H G +++G
Sbjct: 409 ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE 468
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YFN M + +++ PE HYSCM DLLGR GKL+EA F+ +MP K + W LL AC+ H
Sbjct: 469 YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+N+ + E A L ++P +A PYV +AN+YA +W+ +A++R M+ +++K PG S
Sbjct: 529 KNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSW 588
Query: 602 VHINGKTCTFTVED 615
+ + K F ED
Sbjct: 589 IEVKKKKHVFVAED 602
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 208/434 (47%), Gaps = 13/434 (2%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
++I + T++ +N+ I D E A++LF+RM+K E + T + AC D
Sbjct: 97 FDEIPQPDTVS-YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVD 155
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIV 128
+ + +H V F S V V Y+K L A +F M + RD SWN+MIV
Sbjct: 156 LI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ Q K L L+ M G + D T+ + A HL + H I G
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 189 DVSVCNTWISAYAK---CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF-DDSLN 244
+ V + I Y+K C+ + +E VF+ I +V WN++I G + ++ ++++
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP--DLVVWNTMISGYSMNEELSEEAVK 331
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMY 303
+R M G RPD + V + S+C + Q + +H I + +SV N LIS+Y
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLY 391
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
K G++ AR++FD M + VS+ MI GYAQ G EAL L+ M +G P+ +T +
Sbjct: 392 YKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFV 451
Query: 364 SMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+++S C G ++ G+ +F+ + ++ + +ID+ + G + +A A+P
Sbjct: 452 AVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY 511
Query: 423 KT-VVSWTTMIAGC 435
K V+W ++ C
Sbjct: 512 KPGSVAWAALLGAC 525
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 174/403 (43%), Gaps = 36/403 (8%)
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
F T L ++ + L KS+H+ + V + + N +++ Y+KC L A F
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 215 GIEE-----------------------------GLRTVVSWNSIIGGCTYGDKFDDSLNF 245
EE VS+N++I G + ++
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
++ M GF D T+ L+++C L+ + +H + GFD SV N ++ YSK
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 306 CGDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
G + A +F GM + R VSW +MI Y Q + +AL L+ M G D+ T+ S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG---SIGDARELFYALP 421
+++ L G+ F G N V + LID YSKCG + D+ ++F +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 422 EKTVVSWTTMIAGCALNGEFV-EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+V W TMI+G ++N E EA+ F QM + RP+ +F+ V AC++ +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
L K + + ++ + + L + G L++A MP
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 313/597 (52%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V ++ +L LF ++ ++++ P+ + AC+ L + IH HI+
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D + ++D Y KC R+ A+KLF+ MP++++ SW ++ G+ Q ++ +
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M G++ D + + L VH++ I + D V N+ I YA
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT-YGDKFD--DSLNFYRHMIYDGFRPDV 258
KC+ L A VF VV +N++I G + G +++ ++LN +R M + RP +
Sbjct: 397 KCDCLTDARKVFDIFAAA--DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T VSLL + +L + +H YG +LD+ + LI +YS C + +R +FD
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + V W +M +GY Q+ + +EAL LF ++ + E PD T +M++ G +++LG
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ F GL+ N + NAL+DMY+KCGS DA + F + + VV W ++I+ A +
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
GE +AL + +MM + PN +TF+ VL AC+HAG +E G F LM + + + PE H
Sbjct: 635 GEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEH 693
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM LLGR G+L +A + ++ MP K A +W +LL C N+E+ E+ A +
Sbjct: 694 YVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSD 753
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + + ++NIYA G W +R MK V K PG+S + IN + F +D
Sbjct: 754 PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKD 810
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 234/470 (49%), Gaps = 10/470 (2%)
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
Y ++HG I+ D ++ ++++Y++ + A K+F+KMP+R++ SW+ M+
Sbjct: 62 YQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACN 121
Query: 132 QMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGVDA 188
G E+ L +F R + + QA + + ++ + SF + G D
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV V I Y K ++ A LVF + E ++ V+W ++I GC + SL +
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPE--KSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
++ D PD + ++LS+C L G+ +H+H + YG ++D S++N LI Y KCG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ +A LF+GM ++ +SWT ++SGY Q EA+ LF +M G PD+ S+++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C AL G Y L ++ V N+LIDMY+KC + DAR++F VV +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 429 TTMIAGCALNG---EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
MI G + G E EAL++F M +RP+ +TF+++L+A L L
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
M K Y +N ++ S + D+ LK++ M +K D IW ++
Sbjct: 480 MFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMF 527
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 309/600 (51%), Gaps = 5/600 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ + V +A+ +F+ M + ++ + TF I AC LS F + +H
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+K+ +FV +DMY+K + A LF +P +D SWNA+ VG AQ E+
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+C+ MRL GI D V+ A + + K +H I G+ ++ +V ++ I
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 570
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K D++ + +F ++ ++V N++I G + D+++ ++ ++ DG +P
Sbjct: 571 LYSKHGDVESSRKIFAQVDAS--SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 628
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFD 317
T S+LS C G+ VH + + G D +++ +L +Y K ++ A L
Sbjct: 629 VTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLT 688
Query: 318 GMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
M D + WTA+ISGYAQ G D +L F+ M D T S++ C A
Sbjct: 689 EMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFA 748
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
GK G +ALIDMYSKCG + + E F L K ++ W +MI G
Sbjct: 749 DGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGF 808
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A NG EAL LF +M EL ++P+ VTFL VL ACTH+G + +G +F M KVY + P
Sbjct: 809 AKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPR 868
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
L+HY+C DLLGR G L+EA + + +P + D +W T L AC++H++ E G+ A +L
Sbjct: 869 LDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLV 928
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
ELEP ++ YV +++++A G W R M+ V KFPG S + + KT F V+D
Sbjct: 929 ELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQD 988
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 254/528 (48%), Gaps = 6/528 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L K+ ST+ WN+ I L L++ M+ + P TF + A A +
Sbjct: 282 LKKMPTPSTV-AWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 340
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
F+ Q +H V +++FV ++++++YAKC A +FD ++++ WNAM+ G
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F Q E+ + +F M +Q D T + + A + L K VH I +D
Sbjct: 401 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 460
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V N + Y+K + A+ +F I + +SWN++ G + ++++ + M
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQNLEEEEAVCMLKRM 518
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
G PD + + +++C A G+ +H I YG + +V ++LI +YSK GD+
Sbjct: 519 RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDV 578
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+S+R +F + + V A+I+G+ Q + DEA++LF + G P VT S++SGC
Sbjct: 579 ESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 638
Query: 370 GQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVS 427
S +GK Y SG L D+ ++ +L +Y K + DA +L +P+ K +
Sbjct: 639 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 698
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT +I+G A NG +L F +M ++R + TF +VL+AC+ G L+T
Sbjct: 699 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 758
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K + E S + D+ + G + + + + + K D W +++
Sbjct: 759 KSGFGSYE-TATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 218/465 (46%), Gaps = 38/465 (8%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
P+ + AC+++ Y + +H +VKS F S +F + +VDMYAKC + A +
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD + D W++MI + ++G ++ L LF M +G D VT++
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV----------- 263
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
T IS A L A + + + + V+WN++I
Sbjct: 264 ------------------------TIISTLASSGRLDHATALLKKMPT--PSTVAWNAVI 297
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + L Y+ M G P +T S+LS+ +A V+G+ +H+ + +G D
Sbjct: 298 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+V V ++LI++Y+KCG A+ +FD C++ V W AM++G+ Q +EA+R+F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
D T +S++ C + LGK + ++ V NA +DMYSK G+I
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
GDA+ LF +P K +SW + G A N E EA+ + +M + P+ V+F + AC
Sbjct: 478 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++ E G L K Y + S + DL + G ++ +
Sbjct: 538 SNIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESS 581
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 194/384 (50%), Gaps = 2/384 (0%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D T++ A RLD A L KMP +WNA+I G AQ G VL L+ +MR
Sbjct: 258 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 317
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ T + AA + K + +H+ + G+DA+V V ++ I+ YAKC
Sbjct: 318 SWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPS 377
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF E + +V WN+++ G + ++++ +++M+ + D T VS+L +
Sbjct: 378 DAKNVFDLSCE--KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGA 435
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C + G+ VH I D+ + V N + MYSK G I A+ LF + + +SW
Sbjct: 436 CTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISW 495
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
A+ G AQ + +EA+ + M G PD V+ + I+ C A E GK A
Sbjct: 496 NALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIK 555
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G+ N V ++LID+YSK G + +R++F + ++V +IAG N EA+ L
Sbjct: 556 YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQL 615
Query: 448 FHQMMELDLRPNRVTFLAVLQACT 471
F Q+++ L+P+ VTF ++L C+
Sbjct: 616 FQQVLKDGLKPSSVTFSSILSGCS 639
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 171/402 (42%), Gaps = 42/402 (10%)
Query: 74 QMIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ +HG I++ SP + ++V++Y K R+ A+ +R + ++++ A
Sbjct: 76 RALHGRILRGGSPLLGRL--GDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 133
Query: 132 QMGFLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ G VL F +R G + D + + A L+ + VH + G + V
Sbjct: 134 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 193
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+ YAKC D+ A VF GI + W+S+I + ++L + M
Sbjct: 194 FCEAALVDMYAKCGDVPNARRVFDGI--ACPDTICWSSMIACYHRVGCYQEALALFSRMD 251
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G PD T+V T+IS + G +D
Sbjct: 252 KMGSAPDQVTLV-----------------------------------TIISTLASSGRLD 276
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
A L M + V+W A+ISG+AQ G L L+ M + G P T SM+S
Sbjct: 277 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 336
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
A G+ A GL NV V ++LI++Y+KCG DA+ +F EK +V W
Sbjct: 337 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 396
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
M+ G N EA+ +F MM L+ + TF+++L ACT+
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 438
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R +H + G L + ++L+ +Y K G + A +R + ++++S +A+
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 338 GDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G + L F + AG PD + ++S C + G L G+ G +V
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
AL+DMY+KCG + +AR +F + + W++MIA G + EAL LF +M ++
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 457 RPNRVTFLAVLQACTHAGFLE 477
P++VT + ++ +G L+
Sbjct: 256 APDQVTLVTIISTLASSGRLD 276
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 307/595 (51%), Gaps = 40/595 (6%)
Query: 56 TFPFIA--KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY--KL 111
T P I+ + C + Q +H +K ++ +Q ++ + D Y +L
Sbjct: 18 THPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 74
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
FD++P+ ++ WN MI G++++ F + + L+ M G++ D T L + L
Sbjct: 75 FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 134
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ +H + G+ +V V + Y C L A VF + V++WN II
Sbjct: 135 EYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA--DVITWNMIIS 192
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
KF++S + M P T+V +LS+C + L G+ VHS+ + +
Sbjct: 193 AYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 252
Query: 292 DVSVINTLISMYSKCGDIDSA-------------------------------RFLFDGMC 320
++ + N +I MY+ CG++DSA R FD M
Sbjct: 253 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP 312
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ VSWTAMI GY + EAL LF M+A PD T++S+++ C GALELG+W
Sbjct: 313 EKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEW 372
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y +K+++ V NALIDMY KCG + A +F + ++ +WT MI G A+NG
Sbjct: 373 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 432
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+ALD+F M++ + P+ +T++ VL ACTH G ++KG YF MT + + P + HY
Sbjct: 433 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 492
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R G+LKEA + +++MPIK+++ +WG LL C+++R ++ E V ++ ELEP
Sbjct: 493 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 552
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ A YV + NIYA RW+ + LR MM +KK PG SL+ +NG+ F D
Sbjct: 553 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGD 607
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 229/467 (49%), Gaps = 35/467 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR + + L+ M + ++P+ TFPF+ K + Y + +HGH++
Sbjct: 86 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 145
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++FV T +V MY C +LD A +FD P DV +WN +I + ++G E+
Sbjct: 146 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 205
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M + VT++ + A K L K VHS+ + V++++ + N I YA
Sbjct: 206 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 265
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT----------YGDK------------- 238
C ++ A +FR + R ++SW +I+ G T Y DK
Sbjct: 266 DCGEMDSALGIFRSMNN--RDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMI 323
Query: 239 --------FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
F ++L +R+M +PD T+VS+L++C AL G + ++
Sbjct: 324 DGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK 383
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+ V N LI MY KCGD+D A +F M R + +WTAMI G A G ++AL +F M
Sbjct: 384 NDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM 443
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
A +PD +T + ++S C +G ++ G K+F G++ N+ L+D+ ++ G
Sbjct: 444 LKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGR 503
Query: 410 IGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +A E+ +P K + W ++AGC + E A + Q++EL+
Sbjct: 504 LKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 550
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 309/600 (51%), Gaps = 5/600 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ + V +A+ +F+ M + ++ + TF I AC LS F + +H
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+K+ +FV +DMY+K + A LF +P +D SWNA+ VG AQ E+
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+C+ MRL GI D V+ A + + K +H I G+ ++ +V ++ I
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 570
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K D++ + +F ++ ++V N++I G + D+++ ++ ++ DG +P
Sbjct: 571 LYSKHGDVESSRKIFAQVDAS--SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 628
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFD 317
T S+LS C G+ VH + + G D +++ +L +Y K ++ A L
Sbjct: 629 VTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLT 688
Query: 318 GMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
M D + WTA+ISGYAQ G D +L F+ M D T S++ C A
Sbjct: 689 EMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFA 748
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
GK G +ALIDMYSKCG + + E F L K ++ W +MI G
Sbjct: 749 DGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGF 808
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A NG EAL LF +M EL ++P+ VTFL VL ACTH+G + +G +F M KVY + P
Sbjct: 809 AKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPR 868
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
L+HY+C DLLGR G L+EA + + +P + D +W T L AC++H++ E G+ A +L
Sbjct: 869 LDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLV 928
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
ELEP ++ YV +++++A G W R M+ V KFPG S + + KT F V+D
Sbjct: 929 ELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQD 988
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 254/528 (48%), Gaps = 6/528 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L K+ ST+ WN+ I L L++ M+ + P TF + A A +
Sbjct: 282 LKKMPTPSTV-AWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 340
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
F+ Q +H V +++FV ++++++YAKC A +FD ++++ WNAM+ G
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F Q E+ + +F M +Q D T + + A + L K VH I +D
Sbjct: 401 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 460
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V N + Y+K + A+ +F I + +SWN++ G + ++++ + M
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQNLEEEEAVCMLKRM 518
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
G PD + + +++C A G+ +H I YG + +V ++LI +YSK GD+
Sbjct: 519 RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDV 578
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+S+R +F + + V A+I+G+ Q + DEA++LF + G P VT S++SGC
Sbjct: 579 ESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 638
Query: 370 GQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVS 427
S +GK Y SG L D+ ++ +L +Y K + DA +L +P+ K +
Sbjct: 639 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 698
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT +I+G A NG +L F +M ++R + TF +VL+AC+ G L+T
Sbjct: 699 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 758
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K + E S + D+ + G + + + + + K D W +++
Sbjct: 759 KSGFGSYE-TATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 218/465 (46%), Gaps = 38/465 (8%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
P+ + AC+++ Y + +H +VKS F S +F + +VDMYAKC + A +
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD + D W++MI + ++G ++ L LF M +G D VT++
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV----------- 263
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
T IS A L A + + + + V+WN++I
Sbjct: 264 ------------------------TIISTLASSGRLDHATALLKKMPT--PSTVAWNAVI 297
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + L Y+ M G P +T S+LS+ +A V+G+ +H+ + +G D
Sbjct: 298 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+V V ++LI++Y+KCG A+ +FD C++ V W AM++G+ Q +EA+R+F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
D T +S++ C + LGK + ++ V NA +DMYSK G+I
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
GDA+ LF +P K +SW + G A N E EA+ + +M + P+ V+F + AC
Sbjct: 478 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++ E G L K Y + S + DL + G ++ +
Sbjct: 538 SNIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESS 581
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 194/384 (50%), Gaps = 2/384 (0%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D T++ A RLD A L KMP +WNA+I G AQ G VL L+ +MR
Sbjct: 258 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 317
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ T + AA + K + +H+ + G+DA+V V ++ I+ YAKC
Sbjct: 318 SWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPS 377
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF E + +V WN+++ G + ++++ +++M+ + D T VS+L +
Sbjct: 378 DAKNVFDLSCE--KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGA 435
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C + G+ VH I D+ + V N + MYSK G I A+ LF + + +SW
Sbjct: 436 CTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISW 495
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
A+ G AQ + +EA+ + M G PD V+ + I+ C A E GK A
Sbjct: 496 NALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIK 555
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G+ N V ++LID+YSK G + +R++F + ++V +IAG N EA+ L
Sbjct: 556 YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQL 615
Query: 448 FHQMMELDLRPNRVTFLAVLQACT 471
F Q+++ L+P+ VTF ++L C+
Sbjct: 616 FQQVLKDGLKPSSVTFSSILSGCS 639
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 171/402 (42%), Gaps = 42/402 (10%)
Query: 74 QMIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ +HG I++ SP + ++V++Y K R+ A+ +R + ++++ A
Sbjct: 76 RALHGRILRGGSPLLGRL--GDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 133
Query: 132 QMGFLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ G VL F +R G + D + + A L+ + VH + G + V
Sbjct: 134 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 193
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+ YAKC D+ A VF GI + W+S+I + ++L + M
Sbjct: 194 FCEAALVDMYAKCGDVPNARRVFDGI--ACPDTICWSSMIACYHRVGCYQEALALFSRMD 251
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G PD T+V T+IS + G +D
Sbjct: 252 KMGSAPDQVTLV-----------------------------------TIISTLASSGRLD 276
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
A L M + V+W A+ISG+AQ G L L+ M + G P T SM+S
Sbjct: 277 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 336
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
A G+ A GL NV V ++LI++Y+KCG DA+ +F EK +V W
Sbjct: 337 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 396
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
M+ G N EA+ +F MM L+ + TF+++L ACT+
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 438
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R +H + G L + ++L+ +Y K G + A +R + ++++S +A+
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 338 GDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G + L F + AG PD + ++S C + G L G+ G +V
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
AL+DMY+KCG + +AR +F + + W++MIA G + EAL LF +M ++
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 457 RPNRVTFLAVLQACTHAGFLE 477
P++VT + ++ +G L+
Sbjct: 256 APDQVTLVTIISTLASSGRLD 276
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/625 (32%), Positives = 324/625 (51%), Gaps = 24/625 (3%)
Query: 2 AASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA 61
+ SS PP + +I+ S +D EA LLL K+ E L + +
Sbjct: 23 SPSSYPPE-----KGQSISFQKSHRFTHLDFGEA---LLL---NKEGTEEEEKLFYVPLL 71
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+ C + +Q++HGH++K+ + FV + +V++YAKC ++ A ++F+ MP R+V
Sbjct: 72 QQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVV 131
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
+W ++VGF Q + + +F M G T+ + A + L L H++
Sbjct: 132 AWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYI 191
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
I +D D SV + S Y+KC L+ A F I E + V+SW S + C
Sbjct: 192 IKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIRE--KNVISWTSAVSACGDNGAPVK 249
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
L + MI + +P+ T+ S LS C +L G V S I +G++ ++ V N+L+
Sbjct: 250 GLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLY 309
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL-----------DEALRLFFAM 350
+Y K G I A F+ M D + V+W AMI+G+AQ +L EAL++F +
Sbjct: 310 LYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKL 369
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+G PDL T+ S++S C + A+E G+ G +V+V +LI MY+KCGSI
Sbjct: 370 NQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSI 429
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A + F + +T+++WT+MI G + +G +AL +F M +RPN VTF+ VL AC
Sbjct: 430 ERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSAC 489
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+HAG + + YF +M K Y++ P ++HY CM D+ R G+L++AL+F++ M + I
Sbjct: 490 SHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFI 549
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
W + C+ H N+E+G Y + +L L+P YV + N+Y R+D V+ +R MM+
Sbjct: 550 WSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEV 609
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
+V K S + I K +F D
Sbjct: 610 EKVGKLKDWSWISIKDKVYSFKTND 634
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 317/604 (52%), Gaps = 13/604 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + ++ + L RM+++ + P+ +TF +C IH +V
Sbjct: 26 WTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVV 85
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFAQMGFLEKVL 140
S D V +++MY KC L A ++F KM R+V SW+ M A G + + L
Sbjct: 86 DSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEAL 145
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M L+GI+A ++ + A + + +HS G ++++ V N ++ Y
Sbjct: 146 RHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMY 205
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C ++ A VF ++E LR VVSWN ++ + D+ D++ Y+ M RPD T
Sbjct: 206 GRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVT 262
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VSLLS+C E + GR++H ++ + +V V N L+SMY+KCG AR +FD M
Sbjct: 263 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 322
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAM---EAAGEV----PDLVTVLSMISGCGQSG 373
R+ +SWT +IS Y ++ + EA LF M E G PD + +++++ C
Sbjct: 323 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVS 382
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMI 432
ALE GK A S GL + V A++++Y KCG I +AR +F A+ + V W MI
Sbjct: 383 ALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMI 442
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ- 491
A A G+ EAL LF +M +RP+ +F+++L AC+H G ++G YF MT Y+
Sbjct: 443 AVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRN 502
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V + H+ C+ADLLGR G+LKEA +F++ +P+K DA W +LL AC+ HR+++ + VA
Sbjct: 503 VTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVA 562
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+L LEP A YV ++NIYA +W VA +R M VKK G S + I F
Sbjct: 563 NKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDF 622
Query: 612 TVED 615
D
Sbjct: 623 ATGD 626
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 228/447 (51%), Gaps = 14/447 (3%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MYA CD A FD + R++ SW ++ FA G ++ L MR G++ D VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + + L +H + ++ D V N ++ Y KC L A+ VF +E
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
R V+SW+ + G ++L +R M+ G + + +V++LS+C P + G
Sbjct: 121 R-TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR--VSWTAMISGYA 335
R++HS GF+ ++ V N +++MY +CG ++ AR +FD M + R VSW M+S Y
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+A++L+ M+ PD VT +S++S C + + LG+ + L+ NV+
Sbjct: 240 HNDRGKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V NAL+ MY+KCGS +AR +F + +++++SWTT+I+ EA LF QM+EL+
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356
Query: 456 -------LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
++P+ + F+ +L AC LE+G + ++ + + + +L G+
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGK 415
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLL 535
G+++EA ++ + D +W ++
Sbjct: 416 CGEIEEARRIFDAVCSRPDVQLWNAMI 442
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 187/376 (49%), Gaps = 20/376 (5%)
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YA C+ A+ F +E+ R + SW ++ + ++L M DG RPD
Sbjct: 2 YAHCDSPGDAKAAFDALEQ--RNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAV 59
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T ++ L SC PE+L G +H + ++D V N L++MY KCG + A+ +F M
Sbjct: 60 TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 320 CDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+RTR +SW+ M +A G++ EALR F M G +++++S C ++
Sbjct: 120 -ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD 178
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--KTVVSWTTMIAGC 435
G+ + G + ++V NA++ MY +CG++ +AR++F A+ E + VVSW M++
Sbjct: 179 GRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTY 238
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
N +A+ L+ +M LRP++VT++++L AC+ A + G ++ K VN E
Sbjct: 239 VHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSA----EDVGLGRVLHKQI-VNDE 290
Query: 496 LNHY----SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
L + + + + G EA M +S W T++ A R + ++
Sbjct: 291 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIIS-WTTIISAYVRRRLVAEACHLF 349
Query: 552 YRLFELEPHSAAPYVE 567
++ ELE + ++ V+
Sbjct: 350 QQMLELEKNGSSQRVK 365
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY+ C A+ FD + R SWT +++ +A G E LR M G PD VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++ + CG +L G L+ + V NAL++MY KCGS+ A+ +F +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 422 E-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+ V+SW+ M AL+G EAL F M+ L ++ + + +L AC+ ++ G
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM-PIKSDAGIWGTLLCACK 539
+ + + EL + + + GR G ++EA +M D W +L +
Sbjct: 181 MIHSCIA-LSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML-STY 238
Query: 540 IHRNIEIGEYVAYRLFELEP 559
+H + Y+ +L P
Sbjct: 239 VHNDRGKDAIQLYQRMQLRP 258
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/617 (32%), Positives = 335/617 (54%), Gaps = 36/617 (5%)
Query: 5 SLPPRLNKIY-----RSSTINQWNSQIR---EAVDKNEAHKALLLFRRMKKNDIEPNNLT 56
SL P +K++ ++ + WN I A + +E + LF M + + P+ T
Sbjct: 31 SLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRT 88
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
FP + KAC + D IH +K F D++V +++ +Y++ + A LFD+MP
Sbjct: 89 FPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP 145
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
RD+ SWNAMI G+ Q G ++ L L +R + D VTV+ L A A + +
Sbjct: 146 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT 201
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+HS+ I G+++++ L+ + VF + +R ++SWNSII
Sbjct: 202 IHSYSIKHGLESEL---------------LRDCQKVFDRMY--VRDLISWNSIIKAYELN 244
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSV 295
++ +++ ++ M +PD T++SL S + R V + G+ L D+++
Sbjct: 245 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 304
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N ++ MY+K G +DSAR +F+ + + +SW +ISGYAQ G EA+ ++ ME GE
Sbjct: 305 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 364
Query: 356 VP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+ + T +S++ C Q+GAL G GL +V V +L DMY KCG + DA
Sbjct: 365 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 424
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
LFY +P V W T+IA +G +A+ LF +M++ ++P+ +TF+ +L AC+H+G
Sbjct: 425 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 484
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+++G F +M Y + P L HY CM D+ GR G+L+ AL F++SM ++ DA IWG L
Sbjct: 485 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 544
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L AC++H N+++G+ + LFE+EP +V ++N+YA G+W+GV +R++ ++
Sbjct: 545 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR 604
Query: 595 KFPGQSLVHINGKTCTF 611
K PG S + ++ K F
Sbjct: 605 KTPGWSSMEVDNKVEVF 621
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 309/600 (51%), Gaps = 5/600 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ + V +A+ +F+ M + ++ + TF I AC LS F + +H
Sbjct: 401 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 460
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+K+ +FV +DMY+K + A LF +P +D SWNA+ VG AQ E+
Sbjct: 461 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 520
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+C+ MRL GI D V+ A + + K +H I G+ ++ +V ++ I
Sbjct: 521 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 580
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K D++ + +F ++ ++V N++I G + D+++ ++ ++ DG +P
Sbjct: 581 LYSKHGDVESSRKIFAQVDAS--SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 638
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFD 317
T S+LS C G+ VH + + G D +++ +L +Y K ++ A L
Sbjct: 639 VTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLT 698
Query: 318 GMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
M D + WTA+ISGYAQ G D +L F+ M D T S++ C A
Sbjct: 699 EMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFA 758
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
GK G +ALIDMYSKCG + + E F L K ++ W +MI G
Sbjct: 759 DGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGF 818
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A NG EAL LF +M EL ++P+ VTFL VL ACTH+G + +G +F M KVY + P
Sbjct: 819 AKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPR 878
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
L+HY+C DLLGR G L+EA + + +P + D +W T L AC++H++ E G+ A +L
Sbjct: 879 LDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLV 938
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
ELEP ++ YV +++++A G W R M+ V KFPG S + + KT F V+D
Sbjct: 939 ELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQD 998
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 254/528 (48%), Gaps = 6/528 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L K+ ST+ WN+ I L L++ M+ + P TF + A A +
Sbjct: 292 LKKMPTPSTV-AWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 350
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
F+ Q +H V +++FV ++++++YAKC A +FD ++++ WNAM+ G
Sbjct: 351 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 410
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F Q E+ + +F M +Q D T + + A + L K VH I +D
Sbjct: 411 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 470
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V N + Y+K + A+ +F I + +SWN++ G + ++++ + M
Sbjct: 471 LFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQNLEEEEAVCMLKRM 528
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
G PD + + +++C A G+ +H I YG + +V ++LI +YSK GD+
Sbjct: 529 RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDV 588
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+S+R +F + + V A+I+G+ Q + DEA++LF + G P VT S++SGC
Sbjct: 589 ESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 648
Query: 370 GQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVS 427
S +GK Y SG L D+ ++ +L +Y K + DA +L +P+ K +
Sbjct: 649 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 708
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT +I+G A NG +L F +M ++R + TF +VL+AC+ G L+T
Sbjct: 709 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 768
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K + E S + D+ + G + + + + + K D W +++
Sbjct: 769 KSGFGSYE-TATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 815
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 218/465 (46%), Gaps = 38/465 (8%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
P+ + AC+++ Y + +H +VKS F S +F + +VDMYAKC + A +
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD + D W++MI + ++G ++ L LF M +G D VT++
Sbjct: 225 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV----------- 273
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
T IS A L A + + + + V+WN++I
Sbjct: 274 ------------------------TIISTLASSGRLDHATALLKKMPT--PSTVAWNAVI 307
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + L Y+ M G P +T S+LS+ +A V+G+ +H+ + +G D
Sbjct: 308 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 367
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+V V ++LI++Y+KCG A+ +FD C++ V W AM++G+ Q +EA+R+F M
Sbjct: 368 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 427
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
D T +S++ C + LGK + ++ V NA +DMYSK G+I
Sbjct: 428 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 487
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
GDA+ LF +P K +SW + G A N E EA+ + +M + P+ V+F + AC
Sbjct: 488 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 547
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++ E G L K Y + S + DL + G ++ +
Sbjct: 548 SNIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESS 591
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 194/384 (50%), Gaps = 2/384 (0%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D T++ A RLD A L KMP +WNA+I G AQ G VL L+ +MR
Sbjct: 268 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 327
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ T + AA + K + +H+ + G+DA+V V ++ I+ YAKC
Sbjct: 328 SWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPS 387
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF E + +V WN+++ G + ++++ +++M+ + D T VS+L +
Sbjct: 388 DAKNVFDLSCE--KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGA 445
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C + G+ VH I D+ + V N + MYSK G I A+ LF + + +SW
Sbjct: 446 CTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISW 505
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
A+ G AQ + +EA+ + M G PD V+ + I+ C A E GK A
Sbjct: 506 NALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIK 565
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G+ N V ++LID+YSK G + +R++F + ++V +IAG N EA+ L
Sbjct: 566 YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQL 625
Query: 448 FHQMMELDLRPNRVTFLAVLQACT 471
F Q+++ L+P+ VTF ++L C+
Sbjct: 626 FQQVLKDGLKPSSVTFSSILSGCS 649
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 171/402 (42%), Gaps = 42/402 (10%)
Query: 74 QMIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ +HG I++ SP + ++V++Y K R+ A+ +R + ++++ A
Sbjct: 86 RALHGRILRGGSPLLGRL--GDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 143
Query: 132 QMGFLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ G VL F +R G + D + + A L+ + VH + G + V
Sbjct: 144 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 203
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+ YAKC D+ A VF GI + W+S+I + ++L + M
Sbjct: 204 FCEAALVDMYAKCGDVPNARRVFDGI--ACPDTICWSSMIACYHRVGCYQEALALFSRMD 261
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G PD T+V T+IS + G +D
Sbjct: 262 KMGSAPDQVTLV-----------------------------------TIISTLASSGRLD 286
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
A L M + V+W A+ISG+AQ G L L+ M + G P T SM+S
Sbjct: 287 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 346
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
A G+ A GL NV V ++LI++Y+KCG DA+ +F EK +V W
Sbjct: 347 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 406
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
M+ G N EA+ +F MM L+ + TF+++L ACT+
Sbjct: 407 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 448
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R +H + G L + ++L+ +Y K G + A +R + ++++S +A+
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 338 GDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G + L F + AG PD + ++S C + G L G+ G +V
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
AL+DMY+KCG + +AR +F + + W++MIA G + EAL LF +M ++
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 265
Query: 457 RPNRVTFLAVLQACTHAGFLE 477
P++VT + ++ +G L+
Sbjct: 266 APDQVTLVTIISTLASSGRLD 286
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 300/578 (51%), Gaps = 26/578 (4%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL +F M+ + + P+ +T + ACA L D +H ++ K+ SD ++ +++D
Sbjct: 228 ALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLD 287
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+Y KC ++ A +F+ +V WN ++V F Q+ L K LF M+ GI+ + T
Sbjct: 288 LYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFT 347
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ + + L + +HS + G ++D+ V I Y+K L+ A V ++
Sbjct: 348 YPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK 407
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E + VVSW S+I G + D+L ++ M G PD + S +S C +A+ QG
Sbjct: 408 E--KDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQG 465
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H+ G+ DVS+ N L+++Y++CG I A F+ + + ++W ++SG+AQ
Sbjct: 466 LQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G +EAL++F M+ +G ++ T +S +S ++ GK G V
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVG 585
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NALI +Y KCGS DA+ F + E+ VSW T+I C+ +G +EALD F QM
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMK----- 640
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
++G YF M+ Y + P +HY+C+ D+ GR G+L A
Sbjct: 641 -------------------KEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKK 681
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
FV+ MPI +DA +W TLL ACK+H+NIE+GE A L ELEPH +A YV ++N YA+ G+
Sbjct: 682 FVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGK 741
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W +R MM+ V+K PG+S + + F V D
Sbjct: 742 WANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGD 779
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/567 (27%), Positives = 268/567 (47%), Gaps = 17/567 (2%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL L+R+M + + P + +C K F + +H K F S+ FV ++
Sbjct: 126 EALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALI 185
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+Y +C A ++F MP RD ++N +I G AQ E L +F M+ G+ D V
Sbjct: 186 TLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCV 245
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ L A L +HS+ G+ +D + + + Y KC D++ A ++F
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF--- 302
Query: 217 EEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
G RT VV WN I+ + S + M G RP+ T +L +C C +
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G +HS + GF+ D+ V LI MYSK G ++ AR + + + ++ VSWT+MI+GY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q +AL F M+ G PD + + S ISGC A+ G G +V
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVS 482
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ NAL+++Y++CG I +A F + K ++W +++G A +G EAL +F +M +
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKE 514
++ N TF++ L A + +++G + K + E+ + + L G+ G ++
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVG--NALISLYGKCGSFED 600
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIH-RNIEIGEYVAYRLFELEPHSAAPYVEMANIYA 573
A M +++ W T++ +C H R +E ++ +++ + + M++ Y
Sbjct: 601 AKMEFSEMSERNEVS-WNTIITSCSQHGRGLEALDF----FDQMKKEGLSYFKSMSDKYG 655
Query: 574 LGGRWDGVANLRTMMKR----NQVKKF 596
+ R D A + + R ++ KKF
Sbjct: 656 IRPRPDHYACVIDIFGRAGQLDRAKKF 682
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 233/466 (50%), Gaps = 16/466 (3%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH + D V ++D+Y+K + A ++F+++ RD SW AM+ G+AQ G
Sbjct: 64 IHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ L L+ M G+ + + + A+ + +SVH+ G G ++ V N
Sbjct: 124 GEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNA 183
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG---CTYGDKFDDSLNFYRHMIYD 252
I+ Y +C ++AE VF + R V++N++I G C +G+ +L + M
Sbjct: 184 LITLYLRCGSFRLAERVFYDMPH--RDTVTFNTLISGHAQCAHGEH---ALEIFEEMQSS 238
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G PD T+ SLL++C L +G +HS+ G D + +L+ +Y KCGD+++A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETA 298
Query: 313 RFLFDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+F+ + +RT V W ++ + Q DL ++ LF M+ AG P+ T ++ C
Sbjct: 299 LVIFN-LGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTC 357
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
+G ++LG+ + + G + ++ V LIDMYSK G + AR + L EK VVSWT+M
Sbjct: 358 TGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY- 490
IAG + +AL F +M + + P+ + + + C + +G + +VY
Sbjct: 418 IAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQG---LQIHARVYV 474
Query: 491 -QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ +++ ++ + +L R G+++EA + + K D W L+
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLV 519
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 202/428 (47%), Gaps = 28/428 (6%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N+ K+ LF +M+ I PN T+P I + C + + IH VK+ F SD++V
Sbjct: 324 NDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVS 383
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
++DMY+K L+ A ++ + + ++DV SW +MI G+ Q + + L F M+ GI
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIW 443
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D + + K + +H+ G DVS+ N ++ YA+C ++ A
Sbjct: 444 PDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSS 503
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F IE + ++WN ++ G +++L + M G + +V T VS LS+
Sbjct: 504 FEEIEH--KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+ QG+ +H+ I G + V N LIS+Y KCG + A+ F M +R VSW +I+
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIIT 621
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
+Q G EAL F M+ G L SM G + D+YAC
Sbjct: 622 SCSQHGRGLEALDFFDQMKKEG----LSYFKSMSDKYG------IRPRPDHYAC------ 665
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ID++ + G + A++ +P + W T+++ C ++ + +E +L +
Sbjct: 666 -------VIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVH-KNIEVGELAAKH 717
Query: 452 MELDLRPN 459
+ L+L P+
Sbjct: 718 L-LELEPH 724
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 195/428 (45%), Gaps = 5/428 (1%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSL 173
M R AS + GF KVL LF + R G L + + +
Sbjct: 1 MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ +H+ I G+ D V N I Y+K + A VF E R VSW +++ G
Sbjct: 61 VPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFE--ELSARDNVSWVAMLSGY 118
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+++L YR M G P + S+LSSC E QGR VH+ G GF +
Sbjct: 119 AQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSET 178
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V N LI++Y +CG A +F M R V++ +ISG+AQ + AL +F M+++
Sbjct: 179 FVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSS 238
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD VT+ S+++ C G L+ G +Y G+ + ++ +L+D+Y KCG + A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETA 298
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+F VV W ++ + ++ +LF QM +RPN+ T+ +L+ CT
Sbjct: 299 LVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCT 358
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G ++ G +L K ++ + D+ + G L++A ++ + K D W +
Sbjct: 359 GEIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTS 416
Query: 534 LLCACKIH 541
++ H
Sbjct: 417 MIAGYVQH 424
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ ++ + + W S I V AL F+ M+K I P+N+ CA +
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIK 460
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
IH + S + D+ + +V++YA+C R+ A+ F+++ +D +WN ++
Sbjct: 461 AMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GFAQ G E+ L +F M G++ + T + A+ + + K +H+ I G
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V N IS Y KC + A++ F + E R VSWN+II C+ + ++L+F+
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIITSCSQHGRGLEALDFFDQ 638
Query: 249 MIYDGF 254
M +G
Sbjct: 639 MKKEGL 644
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/634 (33%), Positives = 320/634 (50%), Gaps = 66/634 (10%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S I +WN +I + K + AL +F M++ S Y+ MI
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRR-------------------STVTYNAMI 98
Query: 77 HGHIVKSPFW-----------SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
G++ + F D+ M+ Y K L A LF++MP++DV SWNA
Sbjct: 99 SGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNA 158
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
M+ GFAQ GF+E+ +F M + + ++ GL A + + + +
Sbjct: 159 MLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRL----FDSK 210
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+D ++ N + Y + L A +F + +R +SWN +I G ++
Sbjct: 211 MDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP--VRDKISWNIMITGYAQNGLLSEARRL 268
Query: 246 YRHM---------------IYDGFRPDVTTVVSLL--SSCVCPEALVQGRLVHSHGIHYG 288
+ + + +G + T + + + V A++ G V S I
Sbjct: 269 FEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAG-YVQSQQIEKA 327
Query: 289 FDL-------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+L + S NT+++ Y++CG+ID A+ LFD M R +SW AMISGYAQ G +
Sbjct: 328 RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EAL LF M+ G + + + +S C + ALELGK G + + NAL+
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
MY KCGSI +A ++F + EK +VSW TMIAG A +G EAL LF + M++ ++P+ V
Sbjct: 448 AMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDV 506
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
T + VL AC+H G ++KG YFN M + Y + HY+CM DLLGR G+L EAL+ ++S
Sbjct: 507 TLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKS 566
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MP DA WG LL A +IH + E+GE A ++FE+EP ++ YV ++N+YA GRW V
Sbjct: 567 MPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREV 626
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R+ M+ VKK PG S V I KT FTV D
Sbjct: 627 REMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 188/452 (41%), Gaps = 51/452 (11%)
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
D D+ WN I + + G E L +F MR + VT + + +
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCARK 112
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
V D D+ N +S Y K +L A +F + E + VVSWN+++ G
Sbjct: 113 V----FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE--KDVVSWNAMLSGFAQN 166
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+++ + M+ + + LLS+ V + R + + D ++
Sbjct: 167 GFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRLFDSKM----DWEIVSW 218
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N L+ Y + +D AR LFD M R ++SW MI+GYAQ G L EA RLF + +
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PI 274
Query: 357 PDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVC------------------ 397
D+ +M+SG Q+G L E + F+ + N M+
Sbjct: 275 RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQM 334
Query: 398 --------NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
N ++ Y++CG+I A+ LF +P++ +SW MI+G A +G+ EAL LF
Sbjct: 335 PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFI 394
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M NR L +C LE G + K + + +A + G+
Sbjct: 395 KMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLA-MYGKC 453
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
G ++EA D + + K D W T++ H
Sbjct: 454 GSIEEAFDVFEDITEK-DIVSWNTMIAGYARH 484
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 181/409 (44%), Gaps = 68/409 (16%)
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
VD+D+ N ISAY + + A VF G+ R+ V++N++I G +KFD +
Sbjct: 56 VDSDIVKWNRKISAYMRKGQCESALSVFNGMRR--RSTVTYNAMISGYLSNNKFDCARKV 113
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M D D+ N ++S Y K
Sbjct: 114 FEKMP---------------------------------------DRDLISWNVMLSGYVK 134
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
G++ +AR LF+ M ++ VSW AM+SG+AQ G ++EA ++F M E ++ +
Sbjct: 135 NGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNE----ISWNGL 190
Query: 366 ISGCGQSGALE-LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+S Q+G +E + FD+ + ++ N L+ Y + + DAR LF +P +
Sbjct: 191 LSAYVQNGRIEDARRLFDS-----KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRD 245
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+SW MI G A NG EA LF ++ P R F +GF++ G +
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMV---SGFVQN--GMLD 294
Query: 485 LMTKVYQVNPELNHYSCMADLLG--RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
T++++ PE N S A + G + ++++A + MP ++ + W T++
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS-WNTMVTGYAQCG 353
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
NI+ + + E+ + M + YA G+ + +L MKR+
Sbjct: 354 NIDQAKIL---FDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRD 399
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/633 (31%), Positives = 317/633 (50%), Gaps = 81/633 (12%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F + +C + + ++ IH I+K+ F S+IF+Q +VD Y KC + A K+FD+MP
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 117 DR-------------------------------DVASWNAMIVGFAQMGFLEKVLCLFYN 145
R D SWNAM+ GFAQ E+ L F +
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
M + + A L++ +H+ DV + + + Y+KC
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+ A+ F G+ +R +VSWNS+I +L + M+ +G PD T+ S++
Sbjct: 202 VACAQRAFDGM--AVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVV 259
Query: 266 SSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLFD------- 317
S+C A+ +G +H+ + + D+ + N L+ MY+KC ++ AR +FD
Sbjct: 260 SACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNV 319
Query: 318 ------------------------GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
M ++ VSW A+I+GY Q G+ +EA+RLF ++
Sbjct: 320 VSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379
Query: 354 GEVPDLVTVLSMISGCGQSGALELGK-----------WFDNYACSGGLKDNVMVCNALID 402
P T ++++ C L+LG+ WF + G + ++ V N+LID
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQS-----GEESDIFVGNSLID 434
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY KCG + D +F + E+ VVSW MI G A NG AL++F +M+ +P+ VT
Sbjct: 435 MYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVT 494
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
+ VL AC+HAG +E+G YF+ M + P +H++CM DLLGR G L EA D +Q+M
Sbjct: 495 MIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTM 554
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
P++ D +WG+LL ACK+H NIE+G+YVA +L E++P ++ PYV ++N+YA GRW V
Sbjct: 555 PMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVV 614
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R M++ V K PG S + I + F V+D
Sbjct: 615 RVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKD 647
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 223/472 (47%), Gaps = 38/472 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + +AL F M D N +F ACA L+D IH I
Sbjct: 119 WNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALIS 178
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + D+++ + +VDMY+KC + CA + FD M R++ SWN++I + Q G K L
Sbjct: 179 KSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALE 238
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISAY 200
+F M G++ D +T+ + A + +H+ + D+ + N + Y
Sbjct: 239 VFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMY 298
Query: 201 AKCNDLKMAELVF-----RGI--EEGL----------------------RTVVSWNSIIG 231
AKC + A LVF R + E + + VVSWN++I
Sbjct: 299 AKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIA 358
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-- 289
G T + ++++ + + + P T +LL++C L GR H+ + +GF
Sbjct: 359 GYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWF 418
Query: 290 ----DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
+ D+ V N+LI MY KCG ++ +F+ M +R VSW AMI GYAQ G AL
Sbjct: 419 QSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALE 478
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMY 404
+F M +G+ PD VT++ ++S C +G +E G ++F + GL ++D+
Sbjct: 479 IFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLL 538
Query: 405 SKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G + +A +L +P + V W +++A C ++G + ++ME+D
Sbjct: 539 GRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEID 590
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 169/408 (41%), Gaps = 87/408 (21%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS I A KAL +F M N +EP+ +T + ACA S IH
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIH 275
Query: 78 GHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-------------------- 116
+VK + +D+ + +VDMYAKC R++ A +FD+MP
Sbjct: 276 ARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASV 335
Query: 117 -----------DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAA 165
+++V SWNA+I G+ Q G E+ + LF ++ I T L A
Sbjct: 336 KAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNAC 395
Query: 166 IHAKHLSLLKSVHS------FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
+ L L + H+ F G ++D+ V N+ I Y KC ++ LVF + E
Sbjct: 396 ANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVE- 454
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
R VVSWN++I G ++L +R M+ G +PD T++ +LS+C
Sbjct: 455 -RDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSAC----------- 502
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-------WTAMIS 332
S G ++ R F M RT + +T M+
Sbjct: 503 ------------------------SHAGLVEEGRRYFHSM--RTELGLAPMKDHFTCMVD 536
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ G LDEA L M PD V S+++ C G +ELGK+
Sbjct: 537 LLGRAGCLDEANDLIQTMPMQ---PDNVVWGSLLAACKVHGNIELGKY 581
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 31/301 (10%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + LL SCV ++ + R +H+ I F ++ + N L+ Y KCG + AR +F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 317 DGMCDRT-------------------------------RVSWTAMISGYAQKGDLDEALR 345
D M R + SW AM+SG+AQ +EALR
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
F M + V + + S +S C L +G +V + +AL+DMYS
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCG + A+ F + + +VSW ++I NG +AL++F MM+ + P+ +T +
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
V+ AC + +G + K + +L + + D+ + ++ EA MP++
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
Query: 526 S 526
+
Sbjct: 318 N 318
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/511 (36%), Positives = 289/511 (56%), Gaps = 3/511 (0%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
++ A+K F ++ + D+ WNA+I G+ Q ++ + ++ +M++ + + T + + +A
Sbjct: 50 VNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKA 109
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ K +H G ++V V N+ +S YAK + A +VF + + RTVV
Sbjct: 110 CGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD--RTVV 167
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SW SII G ++LN ++ M +PD +VS++++ E L QG+ +H
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G + + ++ +L +MY+K G ++ ARF F+ M + W AMISGYA G +EA+
Sbjct: 228 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 287
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
+LF M D +T+ S + Q G+LEL +W D Y +D+ V LIDMY
Sbjct: 288 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 347
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCGSI AR +F + +K VV W+ MI G L+G EA+ L+++M + + PN TF+
Sbjct: 348 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 407
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
+L AC ++G +++GW F+LM + + P HYSC+ DLLGR G L +A DF+ SMPI
Sbjct: 408 GLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 466
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
K +WG LL ACKIHR + +GE A +LF L+P++ YV+++N+YA W VAN+
Sbjct: 467 KPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 526
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R MM + + K G S + ING TF V D
Sbjct: 527 RLMMTQKGLNKDLGHSSIEINGNLETFQVGD 557
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 210/418 (50%), Gaps = 3/418 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I+ KN + ++ M+ + + PN TF ++ KAC S + IHG
Sbjct: 68 WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 127
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S++FVQ ++V MYAK ++ A +FDK+ DR V SW ++I G+ Q G + L
Sbjct: 128 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 187
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR ++ D++ ++ + A + + L KS+H +G++ + + + + YA
Sbjct: 188 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA 247
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K +++A F +E+ ++ WN++I G ++++ +R MI R D T+
Sbjct: 248 KRGLVEVARFFFNRMEK--PNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITM 305
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S + + +L R + + + D V LI MY+KCG I AR +FD + D
Sbjct: 306 RSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVAD 365
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W+ MI GY G EA+ L+ M+ AG P+ T + +++ C SG ++ G
Sbjct: 366 KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWEL 425
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
+ G++ + + ++D+ + G + A + ++P K VS W +++ C ++
Sbjct: 426 FHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 21/326 (6%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W S I V + +AL +F+ M++ +++P+ + + A + D + IH
Sbjct: 165 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 224
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G + K + + ++ MYAK ++ A F++M ++ WNAMI G+A G+ E
Sbjct: 225 GLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGE 284
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF M I+ D +T+ A+ L L + + + D V I
Sbjct: 285 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 344
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + +A VF + + + VV W+ +I G +++ Y M G P+
Sbjct: 345 DMYAKCGSIYLARCVFDRVAD--KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 402
Query: 258 VTTVVSLLSSCVCPEALVQG----RLVHSHGI-----HYGFDLDVSVINTLISMYSKCGD 308
T + LL++C + +G L+ HGI HY + ++ + + G
Sbjct: 403 DGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHY---------SCVVDLLGRAGY 453
Query: 309 IDSARFLFDGMCDRTRVS-WTAMISG 333
++ A M + VS W A++S
Sbjct: 454 LNQAYDFIMSMPIKPGVSVWGALLSA 479
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/563 (33%), Positives = 301/563 (53%), Gaps = 13/563 (2%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ + C + +Q++HGH++K+ + FV + +V++YAKC ++ A ++FD M R+
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V +W ++VGF Q + + +F M G T+ + A + L L H+
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+ I VD D SV + S Y+KC L+ A F I E + V+SW S + C
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIRE--KNVISWTSAVSACADNGAP 250
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
L + MI +P+ T+ S LS C +L G V+S I +G++ ++ V N+L
Sbjct: 251 VKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSL 310
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL-----------DEALRLFF 348
+ +Y K G I A LF+ M D + V+W AMI+G+AQ +L EAL+LF
Sbjct: 311 LYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFS 370
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
+ +G PDL T+ S++S C + A+E G+ G +V+V +LI MYSKCG
Sbjct: 371 KLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCG 430
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
SI A + F + +T+++WT+MI G + +G +AL +F M +RPN VTF+ VL
Sbjct: 431 SIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLS 490
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC+HAG + + YF +M K Y++ P ++HY CM D+ R G+L++AL+F++ M +
Sbjct: 491 ACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSE 550
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM 588
IW + CK H N+E+G Y A +L L+P YV + N+Y R++ V+ +R MM
Sbjct: 551 FIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMM 610
Query: 589 KRNQVKKFPGQSLVHINGKTCTF 611
+ +V K S + I K +F
Sbjct: 611 EEEKVGKLKDWSWISIKDKVYSF 633
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 211/453 (46%), Gaps = 23/453 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + V ++ A+ +F+ M P+ T + AC+ L H +I+
Sbjct: 136 WTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYII 195
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D V + + +Y+KC RL+ A K F ++ +++V SW + + A G K L
Sbjct: 196 KYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLR 255
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M V I+ + T+ L L V+S I G ++++ V N+ + Y
Sbjct: 256 LFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYL 315
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGG--------------CTYGDKFDDSLNFYR 247
K + A +F +++ ++V+WN++I G C G ++L +
Sbjct: 316 KSGCIVEAHRLFNRMDDA--SMVTWNAMIAGHAQMMELTKDNLSACHRG---SEALKLFS 370
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
+ G +PD+ T+ S+LS C A+ QG +H+ I GF DV V +LISMYSKCG
Sbjct: 371 KLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCG 430
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
I+ A F M RT ++WT+MI+G++Q G +AL +F M AG P+ VT + ++S
Sbjct: 431 SIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLS 490
Query: 368 GCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTV 425
C +G + +F+ +K + ++DM+ + G + A + E +
Sbjct: 491 ACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSE 550
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
W+ IAGC +G L + L L+P
Sbjct: 551 FIWSNFIAGCKSHGNL--ELGFYAAEQLLSLKP 581
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 170/427 (39%), Gaps = 57/427 (13%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W S + D K L LF M DI+PN T C ++
Sbjct: 230 REKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGT 289
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++ +K + S++ V+ +++ +Y K + A++LF++M D + +WNAMI G AQM
Sbjct: 290 QVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMM 349
Query: 135 FLEK-----------VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
L K L LF + L G++ D T+ + + + +H+ I
Sbjct: 350 ELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIK 409
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G +DV V + IS Y+KC ++ A F +E RT+++W S+I G + +L
Sbjct: 410 TGFLSDVIVSTSLISMYSKCGSIERASKAF--LEMSTRTMIAWTSMITGFSQHGMSQQAL 467
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ + M G RP+ T V +LS+C
Sbjct: 468 HIFEDMSLAGVRPNAVTFVGVLSAC----------------------------------- 492
Query: 304 SKCGDIDSARFLFDGMCDRTRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
S G + A F+ M + ++ + M+ + + G L++AL M P
Sbjct: 493 SHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYE---PS 549
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ I+GC G LELG + S KD L++MY D +
Sbjct: 550 EFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYV-LLLNMYLSAERFEDVSRVRK 608
Query: 419 ALPEKTV 425
+ E+ V
Sbjct: 609 MMEEEKV 615
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/511 (36%), Positives = 289/511 (56%), Gaps = 3/511 (0%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
++ A+K F ++ + D+ WNA+I G+ Q ++ + ++ +M++ + + T + + +A
Sbjct: 35 VNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKA 94
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ K +H G ++V V N+ +S YAK + A +VF + + RTVV
Sbjct: 95 CGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD--RTVV 152
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SW SII G ++LN ++ M +PD +VS++++ E L QG+ +H
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G + + ++ +L +MY+K G ++ ARF F+ M + W AMISGYA G +EA+
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 272
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
+LF M D +T+ S + Q G+LEL +W D Y +D+ V LIDMY
Sbjct: 273 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 332
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCGSI AR +F + +K VV W+ MI G L+G EA+ L+++M + + PN TF+
Sbjct: 333 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 392
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
+L AC ++G +++GW F+LM + + P HYSC+ DLLGR G L +A DF+ SMPI
Sbjct: 393 GLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 451
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
K +WG LL ACKIHR + +GE A +LF L+P++ YV+++N+YA W VAN+
Sbjct: 452 KPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 511
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R MM + + K G S + ING TF V D
Sbjct: 512 RLMMTQKGLNKDLGHSSIEINGNLETFQVGD 542
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 210/418 (50%), Gaps = 3/418 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I+ KN + ++ M+ + + PN TF ++ KAC S + IHG
Sbjct: 53 WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 112
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S++FVQ ++V MYAK ++ A +FDK+ DR V SW ++I G+ Q G + L
Sbjct: 113 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 172
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR ++ D++ ++ + A + + L KS+H +G++ + + + + YA
Sbjct: 173 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA 232
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K +++A F +E+ ++ WN++I G ++++ +R MI R D T+
Sbjct: 233 KRGLVEVARFFFNRMEK--PNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITM 290
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S + + +L R + + + D V LI MY+KCG I AR +FD + D
Sbjct: 291 RSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVAD 350
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W+ MI GY G EA+ L+ M+ AG P+ T + +++ C SG ++ G
Sbjct: 351 KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWEL 410
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
+ G++ + + ++D+ + G + A + ++P K VS W +++ C ++
Sbjct: 411 FHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 144/328 (43%), Gaps = 25/328 (7%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W S I V + +AL +F+ M++ +++P+ + + A + D + IH
Sbjct: 150 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 209
Query: 78 GHIVKS--PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
G + K F DI + T MYAK ++ A F++M ++ WNAMI G+A G+
Sbjct: 210 GLVTKLGLEFEPDIVISLTT--MYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGY 267
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ + LF M I+ D +T+ A+ L L + + + D V
Sbjct: 268 GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTG 327
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I YAKC + +A VF + + + VV W+ +I G +++ Y M G
Sbjct: 328 LIDMYAKCGSIYLARCVFDRVAD--KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 385
Query: 256 PDVTTVVSLLSSCVCPEALVQG----RLVHSHGI-----HYGFDLDVSVINTLISMYSKC 306
P+ T + LL++C + +G L+ HGI HY + ++ + +
Sbjct: 386 PNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHY---------SCVVDLLGRA 436
Query: 307 GDIDSARFLFDGMCDRTRVS-WTAMISG 333
G ++ A M + VS W A++S
Sbjct: 437 GYLNQAYDFIMSMPIKPGVSVWGALLSA 464
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 322/614 (52%), Gaps = 19/614 (3%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
P N + +S I ++ +EA +A+ L+ +M + D+ P+ F I KACA
Sbjct: 126 PERNLVSYTSVITGYSQNGQEA-------EAITLYLKMLQADLVPDQFAFGSIIKACACA 178
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
D + + +H ++K S + Q ++ MY + +++ A K+F +P +D+ SW+++I
Sbjct: 179 GDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSII 238
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK-----SVHSFGI 182
GF+Q+GF + L M G+ + G + A SLL+ +H I
Sbjct: 239 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS----SLLRPDYGSQIHGLCI 294
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
+ + + + YA+C L A VF IE SWN II G D++
Sbjct: 295 KLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERP--DTASWNVIIAGLANNGYADEA 352
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
++ + M GF PD ++ SLL + P AL QG +HS I GF D+SV N+L++M
Sbjct: 353 VSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTM 412
Query: 303 YSKCGDIDSARFLFDGMCDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
Y+ C D+ LF+ ++ VSW A+++ Q E LRLF M + PD +T
Sbjct: 413 YTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 472
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ +++ GC + +L+LG Y+ GL + N LIDMY+KCGS+ AR +F ++
Sbjct: 473 MGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMD 532
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
VVSW+T+I G A +G EAL LF +M + PN VTF+ VL AC+H G +E+G
Sbjct: 533 NGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLK 592
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ +M + ++P H SC+ DLL R G L EA F+ M ++ D +W TLL ACK
Sbjct: 593 LYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 652
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
N+++ + A + +++P ++ +V + +++A G W+ A LR+ MK++ VKK PGQS
Sbjct: 653 GNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSW 712
Query: 602 VHINGKTCTFTVED 615
+ + K F ED
Sbjct: 713 IDVEDKIHIFFAED 726
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 241/539 (44%), Gaps = 9/539 (1%)
Query: 1 MAASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNL-TFPF 59
++ S +P + + T N I + +AL F +KN L T+
Sbjct: 10 VSNSQIPATSSVVSTIKTEELMNDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYIS 69
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ AC+ + IH HI+ S D + ++ MY KC L A ++FD MP+R+
Sbjct: 70 LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERN 129
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
+ S+ ++I G++Q G + + L+ M + D + +A A + L K +H+
Sbjct: 130 LVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHA 189
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT-YGDK 238
I + + + N I+ Y + N + A VF GI + ++SW+SII G + G +
Sbjct: 190 QVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPA--KDLISWSSIIAGFSQLGFE 247
Query: 239 FDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
F ++L+ + M+ G F P+ S L +C G +H I +
Sbjct: 248 F-EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGC 306
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
+L MY++CG +DSAR +F+ + SW +I+G A G DEA+ +F M +G +P
Sbjct: 307 SLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIP 366
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D +++ S++ + AL G ++ G ++ VCN+L+ MY+ C + LF
Sbjct: 367 DAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLF 426
Query: 418 YALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
K VSW ++ C + + VE L LF M+ + P+ +T +L+ C L
Sbjct: 427 EDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 486
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ G K V + + D+ + G L++A SM D W TL+
Sbjct: 487 KLGSQVHCYSWKTGLVLEQFIKNG-LIDMYAKCGSLRQARRIFDSMD-NGDVVSWSTLI 543
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/595 (32%), Positives = 315/595 (52%), Gaps = 3/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ + E + K +L+F ++ ++ E + T P + K C +L Q +HG +
Sbjct: 229 SWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLV 288
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K +D + +++MY+KC + AY++F ++ + DV + MI F + +
Sbjct: 289 IKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAF 348
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M +G++ + T +GL A ++L +S+H+ + G VC+ + Y
Sbjct: 349 DIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMY 408
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
K ++ A L F ++ + SWN+++ G G+ + L ++ +I +G + T
Sbjct: 409 VKTGAVQDAILAFDLMQGP--DIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYT 466
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V +L C L G VH+ + GF D V L+ MY + G +AR +FD +
Sbjct: 467 YVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLK 526
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R SWT ++S YA+ + ++A+ F +M + P+ T+ + +S C L G
Sbjct: 527 ERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQ 586
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+Y G +V V +AL+DMY KCG++ DA LF +V W T+I G A +G
Sbjct: 587 LHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGH 645
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+AL+ F +M++ P+ +TF+ VL AC+HAG L++G YF L++ VY + P L HY+
Sbjct: 646 GYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYA 705
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM D+L + GKL EA + MP+ DA +W T+L AC++H NIEI E A +LFE +P
Sbjct: 706 CMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPD 765
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ + ++NIYA RW+ VA LR+M+ VKK PG S + INGK F +D
Sbjct: 766 DISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 130/523 (24%), Positives = 218/523 (41%), Gaps = 11/523 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + +A AL LF M + + PN KAC SD ++ +H V
Sbjct: 129 WTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAV 188
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D +V +++V+ Y C +D A + P R SWNA++ +A+ G KV+
Sbjct: 189 KLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVML 248
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F + G + T+ + + + ++VH I G++ D + N I Y+
Sbjct: 249 VFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYS 308
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A VF I+E VV + +I D ++ + + M G +P+ T
Sbjct: 309 KCLSAEDAYEVFARIDE--PDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTF 366
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V L + R +H+H + GF V + ++ MY K G + A FD M
Sbjct: 367 VGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQG 426
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
SW ++SG+ + + LR+F + G + + T + ++ C L G
Sbjct: 427 PDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQV 486
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G + + V L+DMY + G +AR +F L E+ V SWT +++ A E
Sbjct: 487 HACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEG 546
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH--- 498
+A++ F M+ + RPN T L C+ L G L Y + N
Sbjct: 547 EKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSG-----LQLHSYTIKSGWNSSVV 601
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
S + D+ + G L +A + + D W T++C H
Sbjct: 602 SSALVDMYVKCGNLADA-EMLFDESDTHDLVEWNTIICGYAQH 643
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 182/410 (44%), Gaps = 2/410 (0%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+ CA + +H +++S D F+ ++++MY KC RL A +FD MP RDV
Sbjct: 68 QGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVV 127
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
+W AM+ G L LF M G+ + + +A L VH+
Sbjct: 128 AWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQA 187
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+ + D V ++ + AY C ++ +AE ++ +R+ VSWN+++ +
Sbjct: 188 VKLEGLFDPYVSSSLVEAYVSCGEVDVAERAL--LDSPVRSDVSWNALLNEYARDGDYAK 245
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ + ++ G T+ ++L C+ G+ VH I G + D + N LI
Sbjct: 246 VMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIE 305
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYSKC + A +F + + V + MIS + + EA +F M G P+ T
Sbjct: 306 MYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYT 365
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ + ++G + L + + G VC+A++ MY K G++ DA F +
Sbjct: 366 FVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQ 425
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+ SW T+++G L +F +++ + N+ T++ +L+ CT
Sbjct: 426 GPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCT 475
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 22/243 (9%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
++ + + L C AL +G+ +H+ + G D + ++L++MY KCG + AR +F
Sbjct: 59 ELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVF 118
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG------ 370
DGM R V+WTAM+S GD ALRLF M G VP+ + + + C
Sbjct: 119 DGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLG 178
Query: 371 -----QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ A++L FD Y V ++L++ Y CG + A P ++
Sbjct: 179 FTPQVHAQAVKLEGLFDPY-----------VSSSLVEAYVSCGEVDVAERALLDSPVRSD 227
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW ++ A +G++ + + +F +++E ++ T VL+ C G + G L
Sbjct: 228 VSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGL 287
Query: 486 MTK 488
+ K
Sbjct: 288 VIK 290
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 11/332 (3%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ + N L +F+ + + N T+ I + C L D + +H
Sbjct: 429 IASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHA 488
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++KS F D V ++DMY + A +FD++ +RDV SW ++ +A+ EK
Sbjct: 489 CVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEK 548
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ F +M + + T+ L +HS+ I G ++ V V + +
Sbjct: 549 AIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVD 607
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC +L AE++F E +V WN+II G +L ++ MI +G PD
Sbjct: 608 MYVKCGNLADAEMLFD--ESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDE 665
Query: 259 TTVVSLLSSCVCPEALVQGR----LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
T V +LS+C L +GR L+ S YG + ++ + +K G + A
Sbjct: 666 ITFVGVLSACSHAGLLDEGRRYFKLLSS---VYGITPTLEHYACMVDILAKAGKLAEAES 722
Query: 315 LFDGMCDRTRVS-WTAMISGYAQKGDLDEALR 345
L + M S W ++ G+++ A R
Sbjct: 723 LINEMPLTPDASLWKTILGACRMHGNIEIAER 754
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
DE LRL +L + + + GC S AL GK G + + + ++L
Sbjct: 50 DERLRL--------RAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSL 101
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
++MY KCG + DAR +F +P + VV+WT M++ G+ AL LF +M E + PN
Sbjct: 102 LNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNG 161
Query: 461 VTFLAVLQACT 471
A L+ACT
Sbjct: 162 FALAAALKACT 172
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/597 (34%), Positives = 316/597 (52%), Gaps = 23/597 (3%)
Query: 25 QIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK-----ACAKLSDFLYSQMIHGH 79
Q+ E VD LF R+ + E N F I K CA+L+ YS +H
Sbjct: 21 QLDEVVD---------LFSRVHREGHELNPFVFTTILKLLVSVECAELA---YS--LHAC 66
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
I K S+ FV T ++D YA C ++ A + FD + +D+ SW M+ +A+ +
Sbjct: 67 IYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDS 126
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L LF MR+VG + T G+ +A I + S+ KSVH + + D+ V +
Sbjct: 127 LQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDL 186
Query: 200 YAKCNDLKMAELVFRGIEEGLR-TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y K D A V R EE + V+ W+ +I ++ +++ + M P+
Sbjct: 187 YTKFGD---ANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQ 243
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T S+L SC E L G+ VH H + G D +V V N L+ +Y+KCG +D++ LF
Sbjct: 244 FTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFME 303
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ +R V+W MI GY Q GD D+AL L+ M VT S++ C A+ELG
Sbjct: 304 LPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELG 363
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + +V+V NALIDMY+KCGSI +AR +F L E+ +SW MI+G +++
Sbjct: 364 TQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMH 423
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EAL F M E + PN++TF+++L AC++AG L+ G YF M + Y + P + H
Sbjct: 424 GLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEH 483
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM LLGR G L +A+ ++ +P++ + +W LL AC IH ++++G A ++ +++
Sbjct: 484 YTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQID 543
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P A +V ++NIYA RW+ VA++R MK VKK PG S + G F+V D
Sbjct: 544 PQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGD 600
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 223/436 (51%), Gaps = 4/436 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + + +L LF M+ PN+ TF + KAC L F + +HG ++
Sbjct: 110 WTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVL 169
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ + D++V ++D+Y K + ++F++MP DV W+ MI +AQ + +
Sbjct: 170 KTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVE 229
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF MR + + T + Q+ ++L L K VH + +G+D +V V N + YA
Sbjct: 230 LFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYA 289
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L + +F +E R V+WN++I G D +L+ Y++M+ + T
Sbjct: 290 KCGRLDNSMKLF--MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTY 347
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C A+ G +HS + +D DV V N LI MY+KCG I +AR +FD + +
Sbjct: 348 SSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSE 407
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-W 380
R +SW AMISGY+ G + EAL+ F M+ VP+ +T +S++S C +G L++G+ +
Sbjct: 408 RDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNY 467
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
F + G++ + ++ + + G + A +L +P E V W ++ C ++
Sbjct: 468 FKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHN 527
Query: 440 EFVEALDLFHQMMELD 455
+ + Q++++D
Sbjct: 528 DVDLGIMSAQQILQID 543
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 210/427 (49%), Gaps = 4/427 (0%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
MPDR+ S+ +I G+ Q L++V+ LF + G + + + + + + L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
S+H+ +G +++ V I AYA C + A F I + +VSW ++
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAI--ACKDMVSWTGMVACYA 118
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
D+F DSL + M GF P+ T +L +C+ EA G+ VH + +++D+
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V L+ +Y+K GD + +F+ M + W+ MIS YAQ EA+ LF M A
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+P+ T S++ C L+LGK + GL NV V NAL+D+Y+KCG + ++
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+LF LP + V+W TMI G +G+ +AL L+ M+E ++ + VT+ +VL+AC
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+E G +L K + ++ + + D+ + G +K A V M + D W +
Sbjct: 359 AMELGTQIHSLSLKTI-YDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAM 416
Query: 535 LCACKIH 541
+ +H
Sbjct: 417 ISGYSMH 423
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 310/578 (53%), Gaps = 3/578 (0%)
Query: 39 LLLFRRMKKNDIEPNNLTFPFIAKACA-KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
L LFRRM N+I P+ TFP + A A L ++ +H +K+ D+FV +++V+
Sbjct: 96 LELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVN 155
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
Y K + A KLFD+MP+R++ SW MI G+A ++ L +F MRLV +
Sbjct: 156 FYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFV 215
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ A + + + K VH + GV VSV N ++ YAKC +L + ++F
Sbjct: 216 FTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCS 275
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ + ++W+++I G + +L + M Y GF P T+V +L +C A+ +G
Sbjct: 276 D--KNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEG 333
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+ H + + G++ + L+ MY+K G AR FD + + V WT++I+GY Q
Sbjct: 334 KQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQN 393
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G +EAL ++ M+ +P+ +T+ S++ C ALE GK GL + +
Sbjct: 394 GKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIR 453
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+AL MY+KCGS+ + +F + ++ +VSW MI+G + NG EAL+LF +M +
Sbjct: 454 SALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTK 513
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
P+ +TF+ VL AC+H G +++GW YFN+M + + P + HY+CM D+L R GKL EA +
Sbjct: 514 PDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKE 573
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F++S I +W LL AC+ H N E+G Y +L EL ++ YV +++IY GR
Sbjct: 574 FIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGR 633
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +R MMK V+K G S + + F V D
Sbjct: 634 LADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGD 671
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 153/488 (31%), Positives = 250/488 (51%), Gaps = 8/488 (1%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI-FVQTTMVDMYAKCDRLDCAYK 110
P N +F + A Q++H HI+K P+ S ++ ++ YAKC L A
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEK--VLCLFYNMRLVGIQADFVTVMGL-TQAAIH 167
+F+ + ++V S+N +I G + G VL LF M I D T G+ T AA++
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ VH GI DV V ++ ++ Y K + A +F + E R +VSW
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPE--RNLVSWT 182
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++I G ++L + M + S+LS+ VCPE + G+ VH +
Sbjct: 183 TMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKN 242
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G VSV+N L++MY+KCG+++ + LF+ D+ ++W+A+I+GY+Q GD +AL+LF
Sbjct: 243 GVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLF 302
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M AG VP T++ ++ C A+E GK Y G + + AL+DMY+K
Sbjct: 303 SKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKF 362
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G GDAR+ F L E +V WT++IAG NG+ EAL ++ +M + PN +T +VL
Sbjct: 363 GFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVL 422
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
+AC++ LE+G + T Y + PEL+ S ++ + + G L+E + + M ++ D
Sbjct: 423 KACSNLAALEQG-KQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRM-LQRD 480
Query: 528 AGIWGTLL 535
W ++
Sbjct: 481 IVSWNAMI 488
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 2/247 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I ++HKAL LF +M P+ T + KAC+ ++ + HG+++
Sbjct: 282 WSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLL 341
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + + I+ T +VDMYAK A K FD + + D+ W ++I G+ Q G E+ L
Sbjct: 342 KSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALS 401
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
++ M++ I + +T+ + +A + L K +H+ I G+ ++S+ + + YA
Sbjct: 402 MYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYA 461
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L+ L+FR + + R +VSWN++I G + ++L + M +G +PD T
Sbjct: 462 KCGSLEEGVLIFRRMLQ--RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITF 519
Query: 262 VSLLSSC 268
V++LS+C
Sbjct: 520 VTVLSAC 526
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 76/146 (52%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I V + +AL ++ RM+ I PN LT + KAC+ L+ + IH +
Sbjct: 383 WTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTI 442
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++ +++ + MYAKC L+ +F +M RD+ SWNAMI G +Q G + L
Sbjct: 443 KYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALE 502
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIH 167
LF MRL G + D +T + + A H
Sbjct: 503 LFEEMRLEGTKPDHITFVTVLSACSH 528
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/518 (37%), Positives = 292/518 (56%), Gaps = 15/518 (2%)
Query: 111 LFDKMPDR-DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
+F K D+ V SWN++I FA+ G + L F +MR + + + T ++
Sbjct: 41 MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L K +H G +D+ V + I Y+KC L A +F I E R VVSW S+
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPE--RNVVSWTSM 158
Query: 230 IGGCTYGDKFDDSLNFYRHMI------YDGFRPDVTTVVSLLSSCV---CPEALVQG--R 278
I G ++ +++ ++ + YD V S+L CV C V+
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH + GF+ ++V NTL+ Y+KCG+I +R +FDGM + SW ++I+ YAQ G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 339 DLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
EA LF M GEV + VT+ +++ C SGAL++GK + L+DN++V
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+++DMY KCG + AR+ F L K V SWT M+AG ++G EA+ +F++M+ ++
Sbjct: 339 TSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIK 398
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN +TF++VL AC+HAG L++GW +FN M + V P + HYSCM DLLGR G LKEA
Sbjct: 399 PNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYG 458
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
+Q M +K D +WG+LL AC+IH+N+E+GE A +LF+L+P + YV ++NIYA GR
Sbjct: 459 LIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGR 518
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
WD V +R +MK + + K PG S+V G+ F V D
Sbjct: 519 WDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGD 556
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 247/524 (47%), Gaps = 37/524 (7%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
++L K +++ WNS I + ++ +AL F M+K + PN TFP K+
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C+ L D + IH + SDIFV + ++DMY+KC L+ A KLFD++P+R+V SW
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVG-----------IQADFVTVMGLTQAAIHAKHLS 172
+MI G+ Q + + LF LV + D V + + A S
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+ + VH + G + ++V NT + AYAKC ++ ++ VF G+EE V SWNS+I
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEE--TDVCSWNSLIAV 273
Query: 233 CTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
++ + + M+ G R + T+ ++L +C AL G+ +H + +
Sbjct: 274 YAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELED 333
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
++ V +++ MY KCG ++ AR FD + + SWT M++GY G EA+++F+ M
Sbjct: 334 NLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMI 393
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
G P+ +T +S+++ C +G L+ G WF+ C ++ + + ++D+ + G +
Sbjct: 394 RCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYL 453
Query: 411 GDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+A L + K + W +++ C + H+ +EL R F
Sbjct: 454 KEAYGLIQEMKVKPDFIVWGSLLGACRI-----------HKNVELGEISARKLFKLDPSN 502
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
C GY+ L++ +Y + M L+ G LK
Sbjct: 503 C----------GYYVLLSNIYADAGRWDDVERMRILMKNHGLLK 536
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 312/573 (54%), Gaps = 13/573 (2%)
Query: 51 EPNNLTFPFIA-KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+P NLT + +A A + + IH +++ + F + T++++MY+KC++++ A
Sbjct: 33 QPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFAL 92
Query: 110 KLF-DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+F D + +V ++NA+I GF GF E+ + MR G+ D T +A +
Sbjct: 93 SIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV 152
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ K +H G++ DV + + ++ Y K ++ A++ F E +R VV WN+
Sbjct: 153 LEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE--ELPIRDVVLWNA 207
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
++ G +F+ L +R M + P TV +LS L GR++H + G
Sbjct: 208 MVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMG 267
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
+D V+V N+LI MY KC I+ A +F+ M ++ SW +++S + Q GD D LRL
Sbjct: 268 YDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLD 327
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALID 402
M AG PDLVTV +++ C AL G+ Y GL D+V++ NA+ID
Sbjct: 328 RMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVID 387
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY+KCGS+ DA +F + K V SW MI G ++G EAL++F +M E+ L+P+ VT
Sbjct: 388 MYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVT 447
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F+ VL AC+HAGF+ +G + M Y V P + HY+C+ D+LGR G+L EA + +M
Sbjct: 448 FVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTM 507
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
PI+++ +W LL AC++H++ + E A R+FELEP YV M+N+Y GR++ V
Sbjct: 508 PIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVL 567
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R M++ V+K PG S + + F D
Sbjct: 568 EVRHTMRQQNVRKTPGCSWIELKNGVHVFVSAD 600
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 216/446 (48%), Gaps = 21/446 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I + + +++M+ + P+ TFP KAC D L + IHG +
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLF 163
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+F+ + +V+ Y K ++ A F+++P RDV WNAM+ G+AQ+G E VL
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 223
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + TV G+ L+ + +H F + +G D+ V+V N+ I Y
Sbjct: 224 TFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F + E + + SWNSI+ D +L M+ G +PD+ TV
Sbjct: 284 KCKCIEDALEIFEMMRE--KDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGF-----DL-DVSVINTLISMYSKCGDIDSARFL 315
++L +C AL+ GR +H + I G D+ DV + N +I MY+KCG + A +
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M ++ SW MI GY G +EAL +F M PD VT + ++S C +G +
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 461
Query: 376 ELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWT 429
G+ F Y + ++ V IDM + G + +A EL +P E V W
Sbjct: 462 SQGRNFLVQMKSKYDVAPTIEHYTCV----IDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD 455
++A C L+ V A ++ EL+
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELE 543
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
++ R I WNS + + L L RM I+P+ +T + AC+ L+ +
Sbjct: 296 EMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALM 355
Query: 72 YSQMIHGHIVKSPFWS------DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+ + IHG+++ S D+ ++ ++DMYAKC + A+ +F++M ++DVASWN
Sbjct: 356 HGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNI 415
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
MI+G+ G+ + L +F M V ++ D VT +G+ A HA +S
Sbjct: 416 MIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 462
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 10/190 (5%)
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
A+++ + +L T ++ + L GK +Y G ++ + +LI+MYSKC
Sbjct: 27 AIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCN 86
Query: 409 SIGDARELFY-ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ A +F E V ++ +I+G NG E + + +M + P++ TF +
Sbjct: 87 QMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAI 146
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIK 525
+AC ++K G +++ EL+ + S + + + G ++ A + +PI+
Sbjct: 147 KACLDVLEIKKIHGL------LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR 200
Query: 526 SDAGIWGTLL 535
D +W ++
Sbjct: 201 -DVVLWNAMV 209
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 317/603 (52%), Gaps = 13/603 (2%)
Query: 22 WNSQIREAVDKNEAHKALL----LFRR--MKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
WN I A + +AH L LFR+ M I PN T + A + LSD +
Sbjct: 79 WNCLIN-AFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQ 137
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
H VK+ D+F +++++MY K + A LFD+MP+R+ SW MI G+A
Sbjct: 138 AHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQEL 197
Query: 136 LEKVLCLFYNMR--LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
++ LF MR G + + A ++ + VHS + G+ VSV
Sbjct: 198 ADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVA 257
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYD 252
N ++ Y KC L+ A F G + ++W++++ G +GD D +L + M
Sbjct: 258 NALVTMYVKCGSLEDALKTFE--LSGNKNSITWSAMVTGFAQFGDS-DKALKLFYDMHQS 314
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G P T+V ++++C A+V+GR +H + + G++L + V++ L+ MY+KCG I A
Sbjct: 315 GELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDA 374
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R F+ + V WT++I+GY Q GD + AL L+ M+ G +P+ +T+ S++ C
Sbjct: 375 RKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNL 434
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
AL+ GK + + +AL MY+KCGS+ D +F+ +P + V+SW MI
Sbjct: 435 AALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMI 494
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G + NG E L+LF +M +P+ VTF+ +L AC+H G +++GW YF +M + +
Sbjct: 495 SGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNI 554
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P + HY+CM D+L R GKL EA +F++S + +W LL A K HR+ ++G Y
Sbjct: 555 APTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGE 614
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+L EL ++ YV +++IY G+W+ V +R MMK V K PG S + + T F
Sbjct: 615 KLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFV 674
Query: 613 VED 615
V D
Sbjct: 675 VGD 677
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 243/479 (50%), Gaps = 11/479 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C + + +H I+ + +S + +++++YAKC A +FD + ++DV SW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMR-LVGIQADFV----TVMGLTQAAIHAKHLSLLKSVH 178
N +I F+Q L + + R LV V T+ G+ AA + H
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ + DV ++ ++ Y K + A +F + E R VSW ++I G +
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPE--RNAVSWATMISGYASQEL 197
Query: 239 FDDSLNFYRHMIYD--GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D++ ++ M ++ G + S+LS+ C + GR VHS + G VSV
Sbjct: 198 ADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVA 257
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N L++MY KCG ++ A F+ ++ ++W+AM++G+AQ GD D+AL+LF+ M +GE+
Sbjct: 258 NALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGEL 317
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P T++ +I+ C + A+ G+ Y+ G + + V +AL+DMY+KCGSI DAR+
Sbjct: 318 PSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKG 377
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F + + VV WT++I G NG++ AL+L+ +M + PN +T +VL+AC++ L
Sbjct: 378 FECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAAL 437
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++G + K Y + E+ S ++ + + G L + MP + D W ++
Sbjct: 438 DQGKQMHAGIIK-YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPAR-DVISWNAMI 494
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V+ L C + L +GR +H+ + G + N+LI++Y+KC A +FD +
Sbjct: 13 VLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSIN 72
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLF-----FAMEAAGEVPDLVTVLSMISGCGQSGAL 375
++ VSW +I+ ++Q+ +L + M VP+ T+ + +
Sbjct: 73 NKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDS 132
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ A +V ++L++MY K G + +AR+LF +PE+ VSW TMI+G
Sbjct: 133 RAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGY 192
Query: 436 ALNGEFVEALDLFHQMM--ELDLRPNRVTFLAVLQACT 471
A EA +LF M E N F +VL A T
Sbjct: 193 ASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALT 230
>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
Length = 917
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 323/605 (53%), Gaps = 13/605 (2%)
Query: 6 LPPRLNKIYRSS---TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
+P K++ S+ + WN+ I+ V +AL + R+M+ + +P+ T I
Sbjct: 317 MPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN-QPDVATLVTIVS 375
Query: 63 ACAKLSDFLYSQMIHGHIV-KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
CA + +HG+++ K + + +++D+Y KCD A LF MP RD+
Sbjct: 376 GCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLI 435
Query: 122 SWNAMIVGFAQMGFL-EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SWN MI G+++ G L E+ +F + G T++ + + + LS K++HSF
Sbjct: 436 SWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEELSFGKALHSF 495
Query: 181 GIHIG-VDADVSVCNTWISAYAKCND-LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ G + VS N I Y C D L L+ R I + ++SWN++I GC +
Sbjct: 496 SLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIP--VSDIISWNTVIVGCLQNEL 553
Query: 239 FDDSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
D+L +R M PD T+VS+LS+C L G+ +H + + F ++ V N
Sbjct: 554 HKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVKN 613
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
+L++MY + GD SA +F M D SW MISG+AQ AL+ + ME P
Sbjct: 614 SLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKMEDFE--P 671
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+ ++V+ +I C Q G GK + L +NV + +L+DMY KCG + A +F
Sbjct: 672 NEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRVF 731
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
A EK++ W ++I+ +G ++++DLF +M + ++ + TF+A+L AC+H+G ++
Sbjct: 732 EASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLSACSHSGLVD 791
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+GW Y+ LM++ + + P H+ C+ D+LGR G+L+EA FV+S+P + GIWG LL A
Sbjct: 792 EGWKYYCLMSEKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVESLPSQQTHGIWGALLNA 851
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
C +++GE +A L LEP ++ YV AN+YA W GVA +R++++ + K
Sbjct: 852 CSSRSELKMGESIAKHLLHLEPGNSGYYVTAANLYAYKDMWSGVAQVRSVLQDKGLVKPH 911
Query: 598 GQSLV 602
G+S V
Sbjct: 912 GRSTV 916
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 220/467 (47%), Gaps = 12/467 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + A LFRRM + E ++ T + ++ + +HG
Sbjct: 130 WNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHGMAA 189
Query: 82 KSPFWSDIF-VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
KS + +VDMYAKC A +F MP RD SWN++I G G E
Sbjct: 190 KSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSA 249
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGVD--ADVSVCNTWI 197
C F M Q D V++ + A L S +SVHS + +G + A SV N+ +
Sbjct: 250 CYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLV 309
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y++ + A+ VF R +VSWN++I G ++ ++L R M + +PD
Sbjct: 310 TFYSEFGMPEAAKKVFASNLN--RNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN-QPD 366
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLF 316
V T+V+++S C L +G +H + I G + S+ N+L+ +Y KC + +A LF
Sbjct: 367 VATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLF 426
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFF-AMEAAGEVPDLVTVLSMISGCGQSGAL 375
M R +SW MISGY++ G L E +L F + + G L T+L++I C L
Sbjct: 427 MTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEEL 486
Query: 376 ELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELF-YALPEKTVVSWTTMIA 433
GK +++ G + V NALI MY CG A L +P ++SW T+I
Sbjct: 487 SFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIV 546
Query: 434 GCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKG 479
GC N +AL++F M L + P+ +T ++VL AC L G
Sbjct: 547 GCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALG 593
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 144/317 (45%), Gaps = 6/317 (1%)
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+ WN+ +G T ++DD+ +R M + D TTVV +LS L +G +H
Sbjct: 127 VILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHG 186
Query: 283 HGIHYGFDLD-VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ N L+ MY+KCG+ SA +F M R SW ++ISG G +
Sbjct: 187 MAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAE 246
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNV--MVCN 398
+ F M + PD V++ S++S C + L G+ + A G +D V N
Sbjct: 247 VSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVAN 306
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+L+ YS+ G A+++F + + +VSW MI G N EAL + Q M L+ +P
Sbjct: 307 SLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQ-MRLENQP 365
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ T + ++ C G L +G + + + E + + + DL + + A
Sbjct: 366 DVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLL 425
Query: 519 VQSMPIKSDAGIWGTLL 535
+MP + D W T++
Sbjct: 426 FMTMP-RRDLISWNTMI 441
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 197/581 (33%), Positives = 309/581 (53%), Gaps = 6/581 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAK--ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+A+ LF R++ E N F + K A+ + +S +H + K F SD FV T
Sbjct: 128 EAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFS--VHACVYKLGFDSDAFVGTA 185
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++D Y+ C +CA ++FD + +D+ SW M+ + + E+ L LF MR+VG + +
Sbjct: 186 LIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPN 245
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + +A + + ++ K+VH ++ V I Y K D+ A VF
Sbjct: 246 NFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFE 305
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ + V+ W+ +I ++ ++++ + M P+ T+ SLL +C L
Sbjct: 306 EMPKD--DVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDL 363
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G +H H + G D++V V N L+ MY+KCG ++++ LF + T VSW +I GY
Sbjct: 364 QLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGY 423
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G+ ++AL LF M VT S++ C ALE G + + N
Sbjct: 424 VQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNT 483
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+V NALIDMY+KCG+I DAR +F L E VSW MI+G +++G + EAL F M+E
Sbjct: 484 VVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLET 543
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
+ +P++VTF+ +L AC++AG L++G YF M + Y + P HY+CM LLGR G L +
Sbjct: 544 ECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDK 603
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
A V +P + +W LL AC IH ++E+G A R+ E+EP A +V ++NIYA
Sbjct: 604 AAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYAN 663
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
RW VA++RT MKR ++K PG S + G+ F+V D
Sbjct: 664 ARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGD 704
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 247/506 (48%), Gaps = 12/506 (2%)
Query: 40 LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
L +R + E N + + ++C + D + +H I+K D+F +++ Y
Sbjct: 30 FLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFY 89
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD---FV 156
K D L A KLFD+MPDR+ S+ +I G++Q + + LF ++ G + + F
Sbjct: 90 VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFS 149
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
TV+ L +A AK L SVH+ +G D+D V I Y+ C + A VF I
Sbjct: 150 TVLKLLVSAEWAK---LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI 206
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E + +VSW ++ + F++SL + M GF+P+ T S+L +CV E
Sbjct: 207 E--YKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNV 264
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ VH + ++ V LI +Y K GD+D A +F+ M + W+ MI+ YAQ
Sbjct: 265 GKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQ 324
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+EA+ +F M +P+ T+ S++ C L+LG + GL NV V
Sbjct: 325 SEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFV 384
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
NAL+DMY+KCG + ++ +LF P T VSW T+I G G +AL LF M+E +
Sbjct: 385 SNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQV 444
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK-VYQVNPELNHYSCMADLLGRKGKLKEA 515
+ VT+ +VL+AC LE G +L K +Y N + + + D+ + G +K+A
Sbjct: 445 QGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVG--NALIDMYAKCGNIKDA 502
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIH 541
V M + D W ++ +H
Sbjct: 503 -RLVFDMLREHDQVSWNAMISGYSVH 527
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 213/421 (50%), Gaps = 4/421 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + V+ ++L LF RM+ +PNN TF + KAC L F + +HG
Sbjct: 214 WTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAF 273
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ + ++FV ++D+Y K +D A ++F++MP DV W+ MI +AQ E+ +
Sbjct: 274 KTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIE 333
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR + + T+ L QA L L +H + +G+D +V V N + YA
Sbjct: 334 MFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYA 393
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ + +F E T VSWN++I G + +L ++ M+ + T
Sbjct: 394 KCGRMENSLQLFS--ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTY 451
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C AL G +HS + +D + V N LI MY+KCG+I AR +FD + +
Sbjct: 452 SSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLRE 511
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-W 380
+VSW AMISGY+ G EAL+ F +M PD VT + ++S C +G L+ G+ +
Sbjct: 512 HDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAY 571
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
F + ++ ++ + + G + A +L + +P E +V+ W +++ C ++
Sbjct: 572 FKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHN 631
Query: 440 E 440
+
Sbjct: 632 D 632
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 161/363 (44%), Gaps = 45/363 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+ I ++ +A+ +F RM++ + PN T + +ACA L D IH H+V
Sbjct: 315 WSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVV 374
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++FV ++DMYAKC R++ + +LF + P+ SWN +IVG+ Q G EK L
Sbjct: 375 KVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALI 434
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M +Q VT + +A L +HS + D + V N I YA
Sbjct: 435 LFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYA 494
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++K A LVF + E VSWN++I G + + ++L + M+ +PD T
Sbjct: 495 KCGNIKDARLVFDMLRE--HDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTF 552
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V +LS+C S G +D + F M +
Sbjct: 553 VGILSAC-----------------------------------SNAGLLDRGQAYFKSMVE 577
Query: 322 RTRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ +T M+ + G LD+A +L + P ++ +++S C +E
Sbjct: 578 EYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFE---PSVMVWRALLSACVIHNDVE 634
Query: 377 LGK 379
LG+
Sbjct: 635 LGR 637
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 202/599 (33%), Positives = 311/599 (51%), Gaps = 46/599 (7%)
Query: 60 IAKACAKLSDFLYSQMIHGH-IVKSPFWS----------DIFVQTTMVDMYAKCDRLDCA 108
I +A FLY+ ++H + ++KS ++ ++F ++ Y+K +
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF--VTVMGLTQAAI 166
F+K+PDRD +WN +I G++ G + + YN + A+ VT+M + + +
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA-YNTMMRDFSANLTRVTLMTMLKLSS 150
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
H+SL K +H I +G ++ + V + + YA + A+ VF G+++ R V +
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD--RNTVMY 208
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYD------------------------------GFRP 256
NS++GG +D+L +R M D G +
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D S+L +C A+ +G+ +H+ I F + V + LI MY KC + A+ +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M + VSWTAM+ GY Q G +EA+++F M+ +G PD T+ IS C +LE
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G F A + GL V V N+L+ +Y KCG I D+ LF + + VSWT M++ A
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
G VE + LF +M++ L+P+ VT V+ AC+ AG +EKG YF LMT Y + P +
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSI 508
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HYSCM DL R G+L+EA+ F+ MP DA W TLL AC+ N+EIG++ A L E
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+PH A Y +++IYA G+WD VA LR M+ VKK PGQS + GK +F+ +D
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADD 627
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 153/322 (47%), Gaps = 4/322 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I+ A +A+ FR MK ++ + F + AC L + IH I+
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F I+V + ++DMY KC L A +FD+M ++V SW AM+VG+ Q G E+ +
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F +M+ GI D T+ A + L H I G+ V+V N+ ++ Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+ + +F E +R VSW +++ + +++ + M+ G +PD T+
Sbjct: 418 KCGDIDDSTRLFN--EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 262 VSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++S+C + +G R YG + + +I ++S+ G ++ A +GM
Sbjct: 476 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 321 -DRTRVSWTAMISGYAQKGDLD 341
+ WT ++S KG+L+
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLE 557
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + W + + A +A+ +F M+++ I+P++ T ACA +S
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
HG + S + V ++V +Y KC +D + +LF++M RD SW AM+ +AQ G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + LF M G++ D VT+ G+ A A
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
Length = 992
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 313/583 (53%), Gaps = 9/583 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + N+ + + RRM+ ++P+ LT + C D + IH + V
Sbjct: 413 WNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAV 472
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + V ++ MYA C +L KLF M R + SWN +I GFA+ G + V C
Sbjct: 473 RSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENG--DSVAC 530
Query: 142 L--FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L F MRL +Q D VT++ L + + +++ +SVHS I G + DVSV N I+
Sbjct: 531 LRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITM 590
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y C ++ E +F + +S+N+++ G + F++ L + HMI + +P++
Sbjct: 591 YTNCGIIQAGEKLFDSLSS--VNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNII 648
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+++LL C + +QG+ VHS+ I L+ S+ + I MYS+ +++ LF +
Sbjct: 649 TLLNLLPIC---HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLV 705
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+R + W A++S Q A F ++ D VT+L++IS C Q G +L +
Sbjct: 706 GERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAE 765
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
A G ++V NALIDM+S+CGSI AR++F EK VSW+TMI +++G
Sbjct: 766 CVTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHG 825
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ ALDLF M+ ++P+ +TF++VL AC+ +GFLE+G F M + + P + HY
Sbjct: 826 DGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHY 885
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLLGR G L EA D V +MP + + +LL AC+ H N ++GE V L E +
Sbjct: 886 ACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDH 945
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ YV ++NIYA G+W LR+ M+ + K G SL+
Sbjct: 946 GNPRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVSLI 988
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 233/435 (53%), Gaps = 5/435 (1%)
Query: 36 HKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
H+ LL L+R + +N TFP + +ACA +S + +H +V++ ++ VQT
Sbjct: 125 HRELLGLYREVCA--FGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTA 182
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++DMYAK ++D + ++FD M RD+ SWNAMI G++ G L + M+ G + +
Sbjct: 183 LLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPN 242
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+++G+ +H+F + GV D S+ +IS YA L + +F
Sbjct: 243 ASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFH 302
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ + +VS NS+I C ++ + +R M G P++ TVVS+L C +
Sbjct: 303 --QSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGI 360
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G VH I +G VSV++ L+SMYSK GD+DSA FLF + +++++ W ++ISGY
Sbjct: 361 NHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGY 420
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
+ + M+ G PD +TV+S+IS C + L +GK YA L+ N
Sbjct: 421 LVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNE 480
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V NAL+ MY+ CG + +LF+ + +T++SW T+I+G A NG+ V L F QM
Sbjct: 481 SVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLA 540
Query: 455 DLRPNRVTFLAVLQA 469
D++ + VT +A++ +
Sbjct: 541 DMQFDLVTLIALISS 555
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 163/626 (26%), Positives = 286/626 (45%), Gaps = 48/626 (7%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
NS I + KA +FR M+ + PN +T I C+ + + +HG ++K
Sbjct: 313 NSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIK 372
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ V + +V MY+K LD A LF + ++ WN++I G+ V+
Sbjct: 373 FGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGS 432
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
M++ G+ D +TV+ + H + L + KS+H++ + ++ + SV N ++ YA
Sbjct: 433 VRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYAD 492
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
C L + +F +E +RT++SWN+II G L F+ M + D+ T++
Sbjct: 493 CGQLSICCKLFHTME--VRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLI 550
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+L+SS E + G VHS I G +LDVSV N LI+MY+ CG I + LFD +
Sbjct: 551 ALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSV 610
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
+S+ A+++GY + +E L LF+ M + P+++T+L+++ C L+ GK
Sbjct: 611 NTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPICHSQ--LQ-GKTVH 667
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+YA K + + I MYS+ ++ LF + E+ + W +++ C +
Sbjct: 668 SYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAG 727
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAG-----------FLEKGW----------- 480
A D F Q+ L+++ + VT LA++ AC+ G L+KG+
Sbjct: 728 VAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALI 787
Query: 481 ------GYFNLMTKVYQVNPELN--HYSCMADLLGRKGKLKEALDF---VQSMPIKSDAG 529
G + K++ ++ E + +S M + G ALD + S IK D
Sbjct: 788 DMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDI 847
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE----MANIYALGGRWDGVANLR 585
+ ++L AC +E G + + L H P +E M ++ G D ++
Sbjct: 848 TFVSVLSACSRSGFLEQGRTLFRSM--LADHGITPRMEHYACMVDLLGRTGHLDEAYDIV 905
Query: 586 TMM----KRNQVKKFPGQSLVHINGK 607
T M ++ ++ G H N K
Sbjct: 906 TTMPFRPSKSLLESLLGACRFHGNSK 931
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 212/425 (49%), Gaps = 7/425 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I + ++ L F +M+ D++ + +T + + + + D + +H
Sbjct: 510 TLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVH 569
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++S D+ V ++ MY C + KLFD + + S+NA++ G+ + E
Sbjct: 570 SLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFE 629
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
++L LFY+M + + +T++ L H++ K+VHS+ I + S+ + I
Sbjct: 630 EILPLFYHMIKNDQKPNIITLLNLLPIC-HSQLQG--KTVHSYAIRNFSKLETSLFTSAI 686
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y++ N+L+ +F + E R + WN+I+ C + + +++R + + + D
Sbjct: 687 CMYSRFNNLEYCHNLFCLVGE--RNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTD 744
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+++L+S+C V + + GFD + V+N LI M+S+CG I AR +FD
Sbjct: 745 AVTMLALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFD 804
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
++ VSW+ MI+ Y+ GD AL LF M ++G PD +T +S++S C +SG LE
Sbjct: 805 ISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQ 864
Query: 378 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
G+ F + G+ + ++D+ + G + +A ++ +P + S +++ C
Sbjct: 865 GRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGAC 924
Query: 436 ALNGE 440
+G
Sbjct: 925 RFHGN 929
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 171/361 (47%), Gaps = 4/361 (1%)
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+V N + F+ GF ++L L+ + G +D T + +A L L K VH
Sbjct: 108 EVYDLNIAVRCFSDHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVH 165
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ G +V V + YAK + ++ VF G++ R ++SWN++I G +
Sbjct: 166 CRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKS--RDLISWNAMISGYSLNGC 223
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
++ + M DGFRP+ +++V ++S G +H+ + G D S+
Sbjct: 224 LLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPA 283
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
ISMY+ G + S+ LF VS +MIS Q G ++A +F M G VP+
Sbjct: 284 FISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPN 343
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
LVTV+S++ C + G+ GL + V V +AL+ MYSK G + A LF
Sbjct: 344 LVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFS 403
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
++ EK+ + W ++I+G +N ++ + +M + P+ +T ++V+ C H L
Sbjct: 404 SVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHV 463
Query: 479 G 479
G
Sbjct: 464 G 464
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 167/378 (44%), Gaps = 12/378 (3%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L +A AK LS L + + + D SV + Y A VF G G
Sbjct: 49 LLRATRSAKCLSKLHA--RLAVTGALREDASVVAGAVERYLFFGKPASAAAVFAGFYRGR 106
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
V N + + + L YR + F D T ++ +C L G+ V
Sbjct: 107 AEVYDLNIAVRCFSDHGFHRELLGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEV 164
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + G +V V L+ MY+K G +D +R +FDGM R +SW AMISGY+ G L
Sbjct: 165 HCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCL 224
Query: 341 DEALRLFFAMEAAGEVPD---LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
EA M+ G P+ LV ++SM+SG G A G +A G+ + +
Sbjct: 225 LEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDA---GDPLHAFALKSGVLGDESLT 281
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
A I MY+ G + + LF+ +VS +MI+ C +G + +A +F M L
Sbjct: 282 PAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLV 341
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VT +++L C++ + G ++ K + + +++ S + + + G L A+
Sbjct: 342 PNLVTVVSILPCCSNFFGINHGESVHGMVIK-FGLAEQVSVVSALVSMYSKLGDLDSAVF 400
Query: 518 FVQSMPIKSDAGIWGTLL 535
S+ KS +W +L+
Sbjct: 401 LFSSVTEKSQL-LWNSLI 417
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/597 (32%), Positives = 312/597 (52%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR E+HK + LF MK + ++ TF + CA D H I+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++FV +VDMYAKC L+ A ++F+ M DRD SWN +I G+ Q +
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFD 515
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI +D + +A + L K VH + G+D + ++ I Y+
Sbjct: 516 LFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYS 575
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A VF + E +VVS N++I G + + ++++ ++ M+ G P T
Sbjct: 576 KCGIIEDARKVFSSMPEW--SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTKGVNPSEITF 632
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFDGMC 320
+++ +C PE+L G H I +GF + + +L+ +Y + A LF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELS 692
Query: 321 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ V WT M+SG++Q G +EAL+ + M G +PD T ++++ C +L G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGR 752
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
+ + + N LIDMY+KCG + + ++F + ++ VVSW ++I G A N
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +AL +F M + + P+ +TFL VL AC+HAG + G F +M Y + ++H
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+CM DLLGR G L+EA DF+++ +K DA +W +LL AC+IH + GE A RL ELE
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELE 932
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P +++ YV ++NIYA GRW+ LR M+ VKK PG S + + + F D
Sbjct: 933 PQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGD 989
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 201/396 (50%), Gaps = 3/396 (0%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
T+++ Y +L A LF +MP DV +WN MI G + G + F NMR ++
Sbjct: 265 VTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVK 324
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ T+ + A +L L VH+ I +G+ +++ V ++ +S Y+KC ++ A V
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F +EE R V WN++I G + + + + M G+ D T SLLS+C
Sbjct: 385 FEALEE--RNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSH 442
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
L G HS I ++ V N L+ MY+KCG ++ AR +F+ MCDR VSW +I
Sbjct: 443 DLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIG 502
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY Q + EA LF M + G V D + S + C L GK + GL
Sbjct: 503 GYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDR 562
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+ ++LIDMYSKCG I DAR++F ++PE +VVS +IAG + N EA+ LF +M+
Sbjct: 563 VLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEML 621
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ P+ +TF +++AC L G + + K
Sbjct: 622 TKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIK 657
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/507 (29%), Positives = 247/507 (48%), Gaps = 42/507 (8%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WNS + + K L F + +N I PN TF + A+ ++ + + IH
Sbjct: 125 VTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHC 184
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K + + +VDMYAKCDRL A ++FD + D + W + G+ + G E+
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ +F MR G + D HL+ V+V NT+IS
Sbjct: 245 AVIVFERMRGEGHRPD---------------HLAF----------------VTVINTYIS 273
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD--SLNFYRHMIYDGFRP 256
LK A L+F E VV+WN +I G +G + + ++ ++ +M +
Sbjct: 274 ----LGKLKDARLLFG--EMPSPDVVAWNVMISG--HGKRGCEIVAIEYFLNMRKSSVKS 325
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+T+ S+LS+ L G +VH+ I G ++ V ++L+SMYSKC +++A +F
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + +R V W AMI GYA G+ + + LF M+++G D T S++S C S LE
Sbjct: 386 EALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLE 445
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+G F + L N+ V NAL+DMY+KCG++ DAR++F + ++ VSW T+I G
Sbjct: 446 MGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYV 505
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ EA DLF +M + + + L+ACT+ L +G L K ++ L
Sbjct: 506 QDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKC-GLDRVL 564
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMP 523
+ S + D+ + G +++A SMP
Sbjct: 565 HTGSSLIDMYSKCGIIEDARKVFSSMP 591
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 238/544 (43%), Gaps = 63/544 (11%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAV--DKNEAHKALL--------LFRRMKKNDIEP 52
+SS+ + + R S+ + ++ V + ++ H+ LL LF+ K D P
Sbjct: 10 SSSMFDSFSLVRRLSSSTELGRRVYGHVLPNHDQIHQGLLEICLEQCKLFKSRKVFDEMP 69
Query: 53 NNLTFPF-IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
+ L I KA +H + S+ + +VD+YAKC ++ A K
Sbjct: 70 HRLALALRIGKA------------VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
F+ + ++DV +WN+M+ ++ +G KVL F ++ I + T + + ++
Sbjct: 118 FNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNV 176
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ +H I +G++ + + YAKC+ L A+ VF GI + V W +
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVD--PNTVCWTCLFS 234
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G ++++ + M +G RPD H F
Sbjct: 235 GYVKAGLPEEAVIVFERMRGEGHRPD----------------------------HLAF-- 264
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
V+VINT IS+ G + AR LF M V+W MISG+ ++G A+ F M
Sbjct: 265 -VTVINTYISL----GKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMR 319
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ T+ S++S G L+LG A GL N+ V ++L+ MYSKC +
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A ++F AL E+ V W MI G A NGE + ++LF M + TF ++L C
Sbjct: 380 AAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
+ LE G + +++ K ++ L + + D+ + G L++A + M + + W
Sbjct: 440 VSHDLEMGSQFHSIIIK-KKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVS-W 497
Query: 532 GTLL 535
T++
Sbjct: 498 NTII 501
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 9/278 (3%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ VHS + G D + + N ++ +Y+KC + A F+ + ++ +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y+ G + LR F ++ P+ T ++S + +E G+ GL+
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
N AL+DMY+KC +GDA+ +F + + V WT + +G G EA+ +F +M
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
RP+ + F+ V+ G L+ F M +P++ ++ M G++G
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMP-----SPDVVAWNVMISGHGKRGCE 308
Query: 513 KEALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIG 547
A+++ +M +KS G++L A I N+++G
Sbjct: 309 IVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/586 (32%), Positives = 313/586 (53%), Gaps = 6/586 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W + N+A AL +F+ M+ + +E NN T + AC + S + +H
Sbjct: 315 SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW-NAMIVGFAQMGFL 136
+ KS F+ D V ++ MY+K +D + ++F+ + D + N MI F+Q
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKP 434
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K + LF M G++ D +V L L+L K VH + + G+ D++V ++
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSL 491
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+KC L+ + +F+GI + W S+I G +++ + M+ DG P
Sbjct: 492 FTLYSKCGSLEESYKLFQGIP--FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSP 549
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D +T+ ++L+ C +L +G+ +H + + G D + + + L++MYSKCG + AR ++
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + + VS +++ISGY+Q G + + LF M +G D + S++ S
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG Y GL V ++L+ MYSK GSI D + F + +++WT +IA A
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G+ EAL +++ M E +P++VTF+ VL AC+H G +E+ + + N M K Y + PE
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPEN 789
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM D LGR G+L+EA F+ +M IK DA +WGTLL ACKIH +E+G+ A + E
Sbjct: 790 RHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIE 849
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
LEP A Y+ ++NI A G WD V R +MK V+K PG S V
Sbjct: 850 LEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 239/462 (51%), Gaps = 10/462 (2%)
Query: 12 KIYR---SSTINQWNSQIREAVDKNEAHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKL 67
K++R S+ + WN+ I A+ +N+ + A+ LF M +P++ T+ + ACA L
Sbjct: 206 KVFRDSLSANVYCWNTIIAGAL-RNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL 264
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +++ ++K D+FV T +VD+YAKC + A ++F ++P+ V SW M+
Sbjct: 265 EKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ + L +F MR G++ + TV + A + VH++ G
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 383
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
D SV IS Y+K D+ ++E VF +++ R + N +I + K ++ +
Sbjct: 384 LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFT 442
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +G R D +V SLLS C L G+ VH + + G LD++V ++L ++YSKCG
Sbjct: 443 RMLQEGLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG 499
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++ + LF G+ + W +MISG+ + G L EA+ LF M G PD T+ ++++
Sbjct: 500 SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C +L GK Y G+ + + +AL++MYSKCGS+ AR+++ LPE VS
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+++I+G + +G + LF M+ + ++L+A
Sbjct: 620 CSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 238/493 (48%), Gaps = 16/493 (3%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
++L F +M E N +++ + AC+ L L+S+++ H +K ++ V++ +
Sbjct: 132 EESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESAL 191
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-AD 154
+D+++K R + AYK+F +V WN +I G + V LF+ M VG Q D
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPD 250
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + A + L K V + I G + DV VC + YAKC + A VF
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I +VVSW ++ G T + +L ++ M + G + TV S++S+C P +
Sbjct: 310 RIPN--PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW-TAMISG 333
+ VH+ GF LD SV LISMYSK GDID + +F+ + D R + MI+
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS 427
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
++Q +A+RLF M G D +V S++S L LGK Y GL +
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLD 484
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ V ++L +YSKCGS+ ++ +LF +P K W +MI+G G EA+ LF +M++
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKG---WGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
P+ T AVL C+ L +G GY T ++ ++ S + ++ + G
Sbjct: 545 DGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY----TLRAGIDKGMDLGSALVNMYSKCG 600
Query: 511 KLKEALDFVQSMP 523
LK A +P
Sbjct: 601 SLKLARQVYDRLP 613
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 227/485 (46%), Gaps = 22/485 (4%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKS---PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
F ++ ++L + ++++ H+++ PF D+F+ +++ Y+ + A KLFD +
Sbjct: 53 FNDQSNSRLCNLRTTKILQAHLLRRYLLPF--DVFLTKSLLSWYSNSGSMADAAKLFDTI 110
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSL 173
P DV S N MI G+ Q E+ L F M +G +A+ ++ + A A+ A S
Sbjct: 111 PQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE 170
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
L H+ I +G V + I ++K + A VFR + V WN+II G
Sbjct: 171 LVCCHT--IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR--DSLSANVYCWNTIIAGA 226
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+ + + M +PD T S+L++C E L G++V + I G + DV
Sbjct: 227 LRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DV 285
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V ++ +Y+KCG + A +F + + + VSWT M+SGY + D AL +F M +
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHS 345
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G + TV S+IS CG+ + + G + V ALI MYSK G I +
Sbjct: 346 GVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLS 405
Query: 414 RELFYALPE---KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
++F L + + +V+ MI + + + +A+ LF +M++ LR + + ++L
Sbjct: 406 EQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL 463
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
++ GY T + +L S + L + G L+E+ Q +P K D
Sbjct: 464 DCLNLGKQVHGY----TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNAC 518
Query: 531 WGTLL 535
W +++
Sbjct: 519 WASMI 523
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 301/563 (53%), Gaps = 14/563 (2%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF-DKMPDRDV 120
++CA + + +H ++ F T++++MY+KC ++ A +F D +R+V
Sbjct: 19 QSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNV 78
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
++NA+I GF G K + MRL G+ D T + + + K +H
Sbjct: 79 FAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGC 135
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ +G++ DV V + ++ Y K ++ A+ VF E +R VV WN++I G D
Sbjct: 136 LLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFG--ELSIRDVVLWNAMINGYAKIGCLD 193
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++L +R M G P T+ +LS L G+ VH + G+D VSV N LI
Sbjct: 194 EALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALI 253
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY KC I A +F+ + ++ SW ++IS + Q GD D LRLF M +G +PDLV
Sbjct: 254 DMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLV 313
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLK--------DNVMVCNALIDMYSKCGSIGD 412
T+ +++ C AL G+ Y GL DN++V NA++DMY+KCGS+ +
Sbjct: 314 TITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNN 373
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A ++F ++ +K V SW MI G ++G +EAL +F QM E + +PN VT + VL AC H
Sbjct: 374 ALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNH 433
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 532
AGF+ G + M + V P + HY+C+ D+LGR G L++A + VQ MPI+++ +W
Sbjct: 434 AGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWR 493
Query: 533 TLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQ 592
LL AC++H N E+ E A ++ +LEP YV M+N+Y + GR++ V +R MK
Sbjct: 494 ALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQN 553
Query: 593 VKKFPGQSLVHINGKTCTFTVED 615
VKK PG S + + F D
Sbjct: 554 VKKTPGCSWIELKDGVHVFRTGD 576
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 221/444 (49%), Gaps = 15/444 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I V A K +++M+ + P+ TFP + + C ++ + + IHG ++
Sbjct: 81 YNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGCLL 137
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+FV + +V+ Y K ++ A K+F ++ RDV WNAMI G+A++G L++ L
Sbjct: 138 KMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALE 197
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M + G+ T+ G+ L K+VH + +G D+ VSV N I Y
Sbjct: 198 VFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYG 257
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A ++F I E + + SWNSII D +L + M+ G PD+ T+
Sbjct: 258 KCKHIGDALIIFEMINE--KDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTI 315
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLD--------VSVINTLISMYSKCGDIDSAR 313
++L +C AL+ GR +H + I G D + V N ++ MY+KCG +++A
Sbjct: 316 TTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNAL 375
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD M + SW MI GY G EAL +F M A P+ VT++ ++S C +G
Sbjct: 376 KIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAG 435
Query: 374 ALELGKWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
+ G+ F + G+ + +IDM + G + DA E+ +P + V W +
Sbjct: 436 FVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRAL 495
Query: 432 IAGCALNGEFVEALDLFHQMMELD 455
+ C L+G A Q+++L+
Sbjct: 496 LGACRLHGNAELAEIAARQVLQLE 519
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+VT V+ L SC + L +G+ +HS I YGF I +LI+MYSKCG + A +F
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 317 DGMC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
C +R ++ A+ISG+ G + + + M G +PD T ++ C + +
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE--VM 127
Query: 376 ELGKWFDNYAC--SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
E+ K + C GL+ +V V +AL++ Y K GS+ DA+++F L + VV W MI
Sbjct: 128 EVKKI---HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMIN 184
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A G EAL++F +M + P+R T +L G L+ G ++ K+ +
Sbjct: 185 GYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKM-GYD 243
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ + + D+ G+ + +AL + M + D W +++
Sbjct: 244 SGVSVSNALIDMYGKCKHIGDAL-IIFEMINEKDIFSWNSII 284
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I + L LF +M + I P+ +T + AC+ L+ ++ + IHG
Sbjct: 277 IFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHG 336
Query: 79 HIVKSPFWSD--------IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+++ + D + V ++DMYAKC ++ A K+FD M +DVASWN MI+G+
Sbjct: 337 YMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGY 396
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS-----LLKSVHSFGIHIG 185
G+ + L +F M + + VT++G+ A HA +S L + +FG+
Sbjct: 397 GMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPT 456
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
++ V I + L+ A + + + VV W +++G C
Sbjct: 457 IEHYTCV----IDMLGRAGHLEDAYEIVQKMPIQANPVV-WRALLGAC 499
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 299/558 (53%), Gaps = 6/558 (1%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
K AKL + +H H++K + + +Q ++ +Y KC + K+FD+MP ++V
Sbjct: 81 KISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVV 140
Query: 122 SWNAMIVGFAQ----MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
SWN +I G + + F M L + + +T+ GL +A+I + + + +
Sbjct: 141 SWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQL 200
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H F + G D++ V + + +YAK + A+ F + R +V WN ++
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSS--RDLVLWNVMVSCYALNG 258
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+ ++ M +G + D T S+++SC + G+ VH I FDLDV V +
Sbjct: 259 VQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVAS 318
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MYSK +I+ AR FDGM + VSWT MI GY Q GD EA+RL M P
Sbjct: 319 ALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYP 378
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D + + S++S CG A Y G + + + NAL+ YSKCGSIG A + F
Sbjct: 379 DELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSF 438
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
++ E ++SWT+++ A +G E +++F +M+ ++RP++V FL VL AC H GF+
Sbjct: 439 SSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVL 498
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+G YFNLM VYQ+ P+ HY+C+ DLLGR G L EA++ + SMP++ + G L A
Sbjct: 499 EGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGA 558
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
CK+HRN+ + + + +LF +EP+ A Y M+N+YA G W VA +R +M+ K P
Sbjct: 559 CKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVP 618
Query: 598 GQSLVHINGKTCTFTVED 615
G S + I G+ TF D
Sbjct: 619 GCSWMEIAGEVHTFVSRD 636
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 197/408 (48%), Gaps = 11/408 (2%)
Query: 21 QWNSQIREAVDKNEAHKALLL----FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
WN+ I V+ N + L FR+M + PN +T + +A +L+D + +
Sbjct: 141 SWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQL 200
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+KS F S+ FV + +VD YAK +D A FD++ RD+ WN M+ +A G
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQ 260
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K +F MRL G++ D T + + L K VH I + D DV V +
Sbjct: 261 GKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASAL 320
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD--DSLNFYRHMIYDGF 254
+ Y+K +++ A F G+ ++ +VSW ++I G YG D +++ + MI
Sbjct: 321 VDMYSKNENIEDARKAFDGMI--VKNIVSWTTMIVG--YGQHGDGKEAMRLLQEMIRVYT 376
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD + S+LSSC A + VH++ + GF+ +S+ N L+S YSKCG I SA
Sbjct: 377 YPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQ 436
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG- 373
F + + +SWT+++ YA G E + +F M + PD V L ++S C G
Sbjct: 437 SFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGF 496
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
LE +F+ + + +ID+ + G + +A L ++P
Sbjct: 497 VLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMP 544
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 159/359 (44%), Gaps = 35/359 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + KA +F+ M+ ++ +N TF + +C L + +HG I+
Sbjct: 247 WNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLII 306
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+ V + +VDMY+K + ++ A K FD M +++ SW MIVG+ Q G ++ +
Sbjct: 307 RLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMR 366
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M V D + + + + + S + VH++ + G +A +S+ N +SAY+
Sbjct: 367 LLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYS 426
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A F + E ++SW S++G + + + + M++ RPD
Sbjct: 427 KCGSIGSAFQSFSSVAE--PDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAF 484
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +LS+C G V G+HY N +I++Y D +
Sbjct: 485 LGVLSAC------AHGGFV-LEGLHY--------FNLMINVYQIMPDSE----------- 518
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+T +I + G LDEA+ L +M P T+ + + C + L +W
Sbjct: 519 ----HYTCIIDLLGRAGFLDEAINLLTSMPVE---PRSDTLGAFLGACKVHRNVGLARW 570
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I W + I + +A+ L + M + P+ L I +C LS +H
Sbjct: 344 NIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVH 403
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++V++ F + + + +V Y+KC + A++ F + + D+ SW +++ +A G +
Sbjct: 404 AYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSK 463
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+ + +F M ++ D V +G+ A H +L+ +H F + I V
Sbjct: 464 EGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGF--VLEGLHYFNLMINV 510
>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
Length = 992
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 312/583 (53%), Gaps = 9/583 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + N+ + + RRM+ ++P+ LT + C D + IH + V
Sbjct: 413 WNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAV 472
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + V ++ MYA C +L KLF M R + SWN +I GFA+ G + V C
Sbjct: 473 RSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENG--DSVAC 530
Query: 142 L--FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L F MRL +Q D VT++ L + + +++ +SVHS I G + DVSV N I+
Sbjct: 531 LRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITM 590
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y C ++ E +F + +S+N+++ G + F + L + HMI + +P++
Sbjct: 591 YTNCGIIQAGEKLFDSLSS--VNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNII 648
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+++LL C + +QG+ VHS+ I L+ S+ + I MYS+ +++ LF +
Sbjct: 649 TLLNLLPIC---HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLV 705
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+R + W A++S Q A F ++ D VT+L++IS C Q G +L +
Sbjct: 706 GERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAE 765
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
A G ++V NALIDM+S+CGSI AR++F EK VSW+TMI +++G
Sbjct: 766 CVTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHG 825
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ ALDLF M+ ++P+ +TF++VL AC+ +GFLE+G F M + + P + HY
Sbjct: 826 DGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHY 885
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLLGR G L EA D V +MP + + +LL AC+ H N ++GE V L E +
Sbjct: 886 ACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDH 945
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ YV ++NIYA G+W LR+ M+ + K G SL+
Sbjct: 946 GNPRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVSLI 988
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 233/435 (53%), Gaps = 5/435 (1%)
Query: 36 HKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
H+ LL L+R + +N TFP + +ACA +S + +H +V++ ++ VQT
Sbjct: 125 HRELLGLYREVCA--FGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTA 182
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++DMYAK ++D + ++FD M RD+ SWNAMI G++ G L + M+ G + +
Sbjct: 183 LLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPN 242
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+++G+ +H+F + GV D SV +IS YA L + +F
Sbjct: 243 ASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFH 302
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ + +VS NS+I C ++ + +R M G P++ TVVS+L C +
Sbjct: 303 --QSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGI 360
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G VH I +G VSV++ L+SMYSK GD+DSA FLF + +++++ W ++ISGY
Sbjct: 361 NHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGY 420
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
+ + M+ G PD +TV+S+IS C + L +GK YA L+ N
Sbjct: 421 LVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNE 480
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V NAL+ MY+ CG + +LF+ + +T++SW T+I+G A NG+ V L F QM
Sbjct: 481 SVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLA 540
Query: 455 DLRPNRVTFLAVLQA 469
D++ + VT +A++ +
Sbjct: 541 DMQFDLVTLIALISS 555
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/626 (26%), Positives = 285/626 (45%), Gaps = 48/626 (7%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
NS I + KA +FR M+ + PN +T I C+ + + +HG ++K
Sbjct: 313 NSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIK 372
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ V + +V MY+K LD A LF + ++ WN++I G+ V+
Sbjct: 373 FGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGS 432
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
M++ G+ D +TV+ + H + L + KS+H++ + ++ + SV N ++ YA
Sbjct: 433 VRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYAD 492
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
C L + +F +E +RT++SWN+II G L F+ M + D+ T++
Sbjct: 493 CGQLSICCKLFHTME--VRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLI 550
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+L+SS E + G VHS I G +LDVSV N LI+MY+ CG I + LFD +
Sbjct: 551 ALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSV 610
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
+S+ A+++GY + E L LF+ M + P+++T+L+++ C L+ GK
Sbjct: 611 NTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPICHSQ--LQ-GKTVH 667
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+YA K + + I MYS+ ++ LF + E+ + W +++ C +
Sbjct: 668 SYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAG 727
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAG-----------FLEKGW----------- 480
A D F Q+ L+++ + VT LA++ AC+ G L+KG+
Sbjct: 728 VAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALI 787
Query: 481 ------GYFNLMTKVYQVNPELN--HYSCMADLLGRKGKLKEALDF---VQSMPIKSDAG 529
G + K++ ++ E + +S M + G ALD + S IK D
Sbjct: 788 DMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDI 847
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE----MANIYALGGRWDGVANLR 585
+ ++L AC +E G + + L H P +E M ++ G D ++
Sbjct: 848 TFVSVLSACSRSGFLEQGRTLFRSM--LADHGITPRMEHYACMVDLLGRTGHLDEAYDIV 905
Query: 586 TMM----KRNQVKKFPGQSLVHINGK 607
T M ++ ++ G H N K
Sbjct: 906 TTMPFRPSKSLLESLLGACRFHGNSK 931
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 211/425 (49%), Gaps = 7/425 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I + ++ L F +M+ D++ + +T + + + + D + +H
Sbjct: 510 TLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVH 569
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++S D+ V ++ MY C + KLFD + + S+NA++ G+ + +
Sbjct: 570 SLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFK 629
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
++L LFY+M + + +T++ L H++ K+VHS+ I + S+ + I
Sbjct: 630 EILPLFYHMIKNDQKPNIITLLNLLPIC-HSQLQG--KTVHSYAIRNFSKLETSLFTSAI 686
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y++ N+L+ +F + E R + WN+I+ C + + +++R + + + D
Sbjct: 687 CMYSRFNNLEYCHNLFCLVGE--RNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTD 744
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+++L+S+C V + + GFD + V+N LI M+S+CG I AR +FD
Sbjct: 745 AVTMLALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFD 804
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
++ VSW+ MI+ Y+ GD AL LF M + G PD +T +S++S C +SG LE
Sbjct: 805 ISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQ 864
Query: 378 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
G+ F + G+ + ++D+ + G + +A ++ +P + S +++ C
Sbjct: 865 GRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGAC 924
Query: 436 ALNGE 440
+G
Sbjct: 925 RFHGN 929
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 171/361 (47%), Gaps = 4/361 (1%)
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+V N + F+ GF ++L L+ + G +D T + +A L L K VH
Sbjct: 108 EVYDLNIAVRCFSDHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVH 165
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ G +V V + YAK + ++ VF G++ R ++SWN++I G +
Sbjct: 166 CRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKS--RDLISWNAMISGYSLNGC 223
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
++ + M DGFRP+ +++V ++S G +H+ + G D SV
Sbjct: 224 LLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPA 283
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
ISMY+ G + S+ LF VS +MIS Q G ++A +F M G VP+
Sbjct: 284 FISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPN 343
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
LVTV+S++ C + G+ GL + V V +AL+ MYSK G + A LF
Sbjct: 344 LVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFS 403
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
++ EK+ + W ++I+G +N ++ + +M + P+ +T ++V+ C H L
Sbjct: 404 SVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHV 463
Query: 479 G 479
G
Sbjct: 464 G 464
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 167/378 (44%), Gaps = 12/378 (3%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L +A AK LS L + + + D SV + Y A VF G G
Sbjct: 49 LLRATRSAKCLSKLHA--RLAVTGALREDASVVAGAVERYLFFGKPASAAAVFAGFYRGR 106
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
V N + + + L YR + F D T ++ +C L G+ V
Sbjct: 107 AEVYDLNIAVRCFSDHGFHRELLGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEV 164
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + G +V V L+ MY+K G +D +R +FDGM R +SW AMISGY+ G L
Sbjct: 165 HCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCL 224
Query: 341 DEALRLFFAMEAAGEVPD---LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
EA M+ G P+ LV ++SM+SG G A G +A G+ + V
Sbjct: 225 LEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDA---GDPLHAFALKSGVLGDESVT 281
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
A I MY+ G + + LF+ +VS +MI+ C +G + +A +F M L
Sbjct: 282 PAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLV 341
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN VT +++L C++ + G ++ K + + +++ S + + + G L A+
Sbjct: 342 PNLVTVVSILPCCSNFFGINHGESVHGMVIK-FGLAEQVSVVSALVSMYSKLGDLDSAVF 400
Query: 518 FVQSMPIKSDAGIWGTLL 535
S+ KS +W +L+
Sbjct: 401 LFSSVTEKSQL-LWNSLI 417
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 191/609 (31%), Positives = 333/609 (54%), Gaps = 7/609 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N++ TI+ WNS I ++ F M+ E N T + C +
Sbjct: 218 FNEMNERDTIS-WNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDY 276
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +HG VK S+I + T++ +Y+ R A +F +MP+RD+ SWN+M+
Sbjct: 277 LKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLAC 336
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ Q G L +F M + + ++VT A + + + K +H F + +G+ +
Sbjct: 337 YVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDE 396
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ + NT I+ Y KC+ + A+ VF+ + + + V+WN++IGG + ++++ ++ +
Sbjct: 397 LIIGNTLITFYGKCHKMAEAKKVFQRMPKLDK--VTWNALIGGFANNAELNEAVAAFK-L 453
Query: 250 IYDGFRP--DVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
+ +G D T+V++L SC+ E L++ G +H+H + GFDLD V ++LI+MY+KC
Sbjct: 454 MREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKC 513
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
GD+ S+ ++FD + +T W A+I+ A+ G +EAL+L M +AG D + +
Sbjct: 514 GDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTAL 573
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S LE G+ G + + + NA +DMY KCG + DA + +++ +
Sbjct: 574 SVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRL 633
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW T+I+ A +G+F +A + FH M++L ++PN V+F+ +L AC+H G +++G Y+ M
Sbjct: 634 SWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASM 693
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
T VY + P + H CM DLLGR G+L EA F+ MPI + +W +LL +C+I+RN+++
Sbjct: 694 TSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDL 753
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
G A L EL+P + YV +N++A GRW+ V ++R M ++++K P S V G
Sbjct: 754 GRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKG 813
Query: 607 KTCTFTVED 615
F + D
Sbjct: 814 NISIFGMGD 822
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 244/524 (46%), Gaps = 10/524 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + D + + ++RM+ I N + +C L D + + GH +
Sbjct: 128 WTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHAL 187
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + + +++ M+ C ++ A +F++M +RD SWN++I AQ E+
Sbjct: 188 KFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFR 247
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F+ MRLV + ++ T+ L +L K VH + G+++++ +CNT +S Y+
Sbjct: 248 YFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYS 307
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K AEL+FR + E R ++SWNS++ + +L + M++ + T
Sbjct: 308 DAGRSKDAELIFRRMPE--RDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTF 365
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L++C+ PE G+++H + G ++ + NTLI+ Y KC + A+ +F M
Sbjct: 366 TSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPK 425
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGC-GQSGALELGK 379
+V+W A+I G+A +L+EA+ F M E + D +T+++++ C ++ G
Sbjct: 426 LDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGI 485
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ G + V ++LI MY+KCG + + +F L KT W +IA A G
Sbjct: 486 PIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYG 545
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EAL L +M + ++ F L LE+G L ++ EL+H+
Sbjct: 546 FGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQ---QLHGSTIKLGFELDHF 602
Query: 500 SCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
A D+ G+ G+L +AL + P W TL+ H
Sbjct: 603 IINAAMDMYGKCGELDDALRILPQ-PTDRSRLSWNTLISISARH 645
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 232/476 (48%), Gaps = 8/476 (1%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY+K R++ A +FD+M +R+ ASWN M+ G+ ++G + + F ++ +GI+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 158 VMGLTQAAIHAKHLSLLK-SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+ L A + ++ H F I G+ DV V +++ YA + A+ +F +
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ R VVSW S++ + + +N Y+ M ++G + + ++SSC ++
Sbjct: 121 PD--RNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIIL 178
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G + H + +G + VS N+LI M+ CGDI+ A +F+ M +R +SW ++IS AQ
Sbjct: 179 GHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+E+ R F M E + T+ ++S CG L+ GK A GL+ N+ +
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
CN L+ +YS G DA +F +PE+ ++SW +M+A +G + AL +F +M+ +
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
N VTF + L AC F G + V + EL + + G+ K+ EA
Sbjct: 359 EINYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK 417
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV-AYRLFELEPHSAAPYVEMANI 571
Q MP K D W L+ N E+ E V A++L S Y+ + NI
Sbjct: 418 KVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNI 470
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 217/461 (47%), Gaps = 5/461 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM-IHGHI 80
WN + V +A+L FR + I+P+ + AC K S HG
Sbjct: 26 WNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSSIMAKEGFQFHGFA 85
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K D+FV T+ V YA + A K+F++MPDR+V SW +++V ++ G ++V+
Sbjct: 86 IKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVI 145
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+ MR GI + + + + + L + + G++ VS N+ I +
Sbjct: 146 NTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMF 205
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
C D+ A +F + E R +SWNSII ++S ++ M + TT
Sbjct: 206 GGCGDINEACSIFNEMNE--RDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTT 263
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ LLS C + L G+ VH + YG + ++ + NTL+S+YS G A +F M
Sbjct: 264 LSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP 323
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R +SW +M++ Y Q G AL++F M + + VT S ++ C GK
Sbjct: 324 ERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKI 383
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ GL+D +++ N LI Y KC + +A+++F +P+ V+W +I G A N E
Sbjct: 384 LHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAE 443
Query: 441 FVEALDLFHQMMELDLRP-NRVTFLAVLQAC-THAGFLEKG 479
EA+ F M E + +T + +L +C TH ++ G
Sbjct: 444 LNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYG 484
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 194/591 (32%), Positives = 322/591 (54%), Gaps = 6/591 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + ++ E KAL +F+ M + +EP+ +T + + CA+L ++ +HG I
Sbjct: 728 WSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 787
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D + +++ MY+KC L + K+F+K+ ++ SW AMI + + F EK L
Sbjct: 788 RKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 847
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV-SVCNTWISAY 200
F M GI+ + VT+ + + + KSVH F I +D + S+ + Y
Sbjct: 848 SFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELY 907
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A+C L E + + G R +V WNS I + ++L +R M+ +PD T
Sbjct: 908 AECGRLGDCETILHVV--GDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFT 965
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S++S+C + G+ +H H I D V N++I MYSK G ++ A +FD +
Sbjct: 966 LASIISACENTGLVRLGKQIHGHVIRTDVS-DEFVQNSVIDMYSKSGFVNLACTVFDQIK 1024
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R+ V+W +M+ G++Q G+ EA+ LF M + + VT L++I C G+LE G+W
Sbjct: 1025 HRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRW 1084
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G+KD + ALIDMY+KCG + A +F A+ +++VSW++MI ++G
Sbjct: 1085 VHHKLIVCGIKD-LFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGR 1143
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
A+ F+QM+E +PN V F+ VL AC H+G +E+G YFNLM K++ V+P H++
Sbjct: 1144 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KLFGVSPNSEHFA 1202
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C DLL R G LKEA ++ MP +DA +WG+L+ C+IH+ ++I + + + ++
Sbjct: 1203 CFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDIVTD 1262
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
Y ++NIYA G W+ +R+ MK +KK PG S + I+ K F
Sbjct: 1263 DTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYSAIEIDKKVFRF 1313
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 164/560 (29%), Positives = 276/560 (49%), Gaps = 39/560 (6%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSPFWSDIFVQTTMV 96
A+ L+ R+ + + FP + +ACA + L + +HG I+KS D ++T+++
Sbjct: 642 AIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLL 701
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY + L A K+FD MP RD+ +W+ ++ + + K L +F M G++ D V
Sbjct: 702 CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAV 761
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + + L + +SVH D D ++CN+ ++ Y+KC DL +E +F I
Sbjct: 762 TMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKI 821
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ + VSW ++I G+ + +L + M+ G P++ T+ S+LSSC + +
Sbjct: 822 AK--KNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIRE 879
Query: 277 GRLVHSHGIHYGFDLDV-SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G+ VH I D + S+ L+ +Y++CG + + + DR V W + IS YA
Sbjct: 880 GKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYA 939
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+G + EAL LF M PD T+ S+IS C +G + LGK + + D
Sbjct: 940 HRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDE-F 998
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V N++IDMYSK G + A +F + +++V+W +M+ G + NG +EA++LF M
Sbjct: 999 VQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSC 1058
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG-W--------------------------GYFNLMTK 488
L N+VTFLAV+QAC+ G LEKG W G N
Sbjct: 1059 LEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGIKDLFTDTALIDMYAKCGDLNTAET 1118
Query: 489 VYQV--NPELNHYSCMADLLGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCACKIHRN 543
V++ N + +S M + G G++ A+ M K + ++ +L AC +
Sbjct: 1119 VFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGS 1178
Query: 544 IEIGEYV--AYRLFELEPHS 561
+E G+Y +LF + P+S
Sbjct: 1179 VEEGKYYFNLMKLFGVSPNS 1198
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 217/421 (51%), Gaps = 8/421 (1%)
Query: 62 KACAKLSDFLYSQMIHGHI-VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
++C+ L L SQ+ H H+ V D T +++ YA D + +F+ P D
Sbjct: 567 RSCSSLR--LVSQL-HAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDS 623
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHS 179
+ +I L+ + L++ + Q + FV L A +HLS+ + VH
Sbjct: 624 FMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHG 683
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
I GVD D + + + Y + +L AE VF G+ +R +V+W++++ C +
Sbjct: 684 RIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP--VRDLVAWSTLVSSCLENCEV 741
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+L ++ M+ DG PD T++S++ C L R VH FD D ++ N+L
Sbjct: 742 LKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSL 801
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
++MYSKCGD+ S+ +F+ + + VSWTAMIS Y + ++ALR F M +G P+L
Sbjct: 802 LTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNL 861
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV-MVCNALIDMYSKCGSIGDARELFY 418
VT+ S++S CG +G + GK +A L N + AL+++Y++CG +GD + +
Sbjct: 862 VTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILH 921
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ ++ +V W + I+ A G +EAL LF QM+ ++P+ T +++ AC + G +
Sbjct: 922 VVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRL 981
Query: 479 G 479
G
Sbjct: 982 G 982
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 15/251 (5%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ +I WNS + + +A+ LF M + +E N +TF + +AC+ + +
Sbjct: 1024 KHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGR 1083
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H ++ D+F T ++DMYAKC L+ A +F M +R + SW++MI + G
Sbjct: 1084 WVHHKLIVCGI-KDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHG 1142
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + F M G + + V M + A H+ + K + GV +
Sbjct: 1143 RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFA 1202
Query: 195 TWISAYAKCNDLKMAELVFRGIEEG--LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+I ++ DLK A +R I+E L W S++ GC K D I
Sbjct: 1203 CFIDLLSRSGDLKEA---YRTIKEMPFLADASVWGSLVNGCRIHQKMD---------IIK 1250
Query: 253 GFRPDVTTVVS 263
+ D++ +V+
Sbjct: 1251 AIKNDISDIVT 1261
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 311/641 (48%), Gaps = 93/641 (14%)
Query: 55 LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC------------ 102
LT K+C+ L Q IH + KS S+IFV+ +++ Y KC
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 103 -------------------DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF 143
LD A LF+KMP + S+ M++G AQ + + +F
Sbjct: 113 CSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVF 172
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
+MR G+ + VT+ + A H + + +H+ +G++A V + Y C
Sbjct: 173 KDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVC 232
Query: 204 NDLKMAELVFRGIEE----------------GL-------------RTVVSWNSIIGGCT 234
+ L A ++F I E GL + VVSW +II G
Sbjct: 233 SSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYV 292
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
++ ++L YR M+ G P+ +V L+S+C A+ +G+ H + GFD
Sbjct: 293 QIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDF 352
Query: 295 VINTLISMYSKCGD-------------------------------IDSARFLFDGMCDRT 323
+ T+I Y+ CG+ I+ AR LFD M +R
Sbjct: 353 IQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERD 412
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
SW++MISGY+Q D AL+LF M A G P+ +T++S+ S G L G+W
Sbjct: 413 VFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHE 472
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK--TVVSWTTMIAGCALNGEF 441
Y S + N + ALIDMY+KCGSI A +LFY + ++ +V W +I G A++G
Sbjct: 473 YILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHA 532
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+L LF Q+ + ++PN +TF+ VL AC HAG ++ G YF M +Y + P + HY C
Sbjct: 533 NVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGC 592
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G+LKEA + ++ MP+K+D IWGTLL AC+ H N+EIGE A L +L+
Sbjct: 593 MIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISH 652
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
A V ++NIYA GRWD +R M+ ++KK PG S V
Sbjct: 653 GAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 693
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 210/467 (44%), Gaps = 64/467 (13%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ +F+ M+ + PN +T + A + + L +M+H K + V T +V
Sbjct: 167 EAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLV 226
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE------------------- 137
MY C L A LFD++P+R+V +WN M+ G+++ G ++
Sbjct: 227 HMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGT 286
Query: 138 ------------KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
+ L ++ +M G+ + V ++ L A +S + H + G
Sbjct: 287 IIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTG 346
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFR----------------GIEEGL--------- 220
D + T I YA C ++ +A L F + G+
Sbjct: 347 FDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFD 406
Query: 221 ----RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R V SW+S+I G + ++ D +L + M+ G +P+ T+VS+ S+ L++
Sbjct: 407 EMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLME 466
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR-TRVS-WTAMISGY 334
GR H + + L+ ++ LI MY+KCG I A LF + DR + VS W A+I G
Sbjct: 467 GRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGL 526
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 393
A G + +L+LF ++ P+ +T + ++S C +G ++ G K+F ++ N
Sbjct: 527 AMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPN 586
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNG 439
+ +ID+ + G + +A E+ +P K VV W T++A C +G
Sbjct: 587 IKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHG 633
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 149/358 (41%), Gaps = 35/358 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V +AL ++R M + + PN + + AC + Q HG IV
Sbjct: 284 WGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIV 343
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK--- 138
++ F F+Q T++ YA C ++ A+ F+ V+SWNA+I GF + G +E+
Sbjct: 344 RTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQ 403
Query: 139 ----------------------------VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
L LF+ M G+Q + +T++ + A
Sbjct: 404 LFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGT 463
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L + H + + + + ++ I YAKC + +A +F I++ + +V WN+II
Sbjct: 464 LMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAII 523
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH--YG 288
G + SL + + +P+ T + +LS+C C LV + G+ Y
Sbjct: 524 CGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSAC-CHAGLVDTGEKYFKGMKNLYN 582
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WTAMISGYAQKGDLDEALR 345
+ ++ +I + + G + A + M + V W +++ G+++ R
Sbjct: 583 IEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGER 640
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC--AKLSDFLY 72
R S+++ WN+ I A+ +L LF ++++ I+PN++TF + AC A L D
Sbjct: 512 RVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVD-TG 570
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFA 131
+ G +I M+D+ + RL A ++ KMP + DV W ++
Sbjct: 571 EKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACR 630
Query: 132 QMGFLE 137
G +E
Sbjct: 631 THGNVE 636
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/575 (33%), Positives = 309/575 (53%), Gaps = 19/575 (3%)
Query: 52 PNNLTFPFIAKACAKL-------SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
P++ +F F A + A L + ++ +H V + + +D FV + + +Y R
Sbjct: 105 PDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSR 164
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQ 163
+D A K+FD +P D WN ++ G + +E F M G ++ D T+ +
Sbjct: 165 VDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVES----FARMVCDGSVRPDATTLASVLP 220
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
AA +++ + VHSF G+ V IS Y+KC D++ A +F +E+ +
Sbjct: 221 AAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKP--DL 278
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLS--SCVCPEALVQGRLVH 281
V++N++I G + S+N + ++ G P+ +T+V+L+ S + L Q +H
Sbjct: 279 VAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQ--CLH 336
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ GF + V + +++ + D++SAR FD M ++T SW AMISGYAQ G +
Sbjct: 337 GFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTE 396
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
A+ LF M P+ +T+ S +S C Q GAL LGKW L+ NV V ALI
Sbjct: 397 MAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALI 456
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY+KCGSI +AR +F + K VVSW MIAG L+G+ EAL L+ M++ L P
Sbjct: 457 DMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSA 516
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TFL+VL AC+H G +E+GW F MT Y +NP + H +CM DLLGR G+LKEA + +
Sbjct: 517 TFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISE 576
Query: 522 MPIKS-DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
P + G+WG LL AC +H++ ++ + + +LFEL+P ++ YV ++N++ ++
Sbjct: 577 FPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSE 636
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A +R K ++ K PG +L+ I K F D
Sbjct: 637 AAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGD 671
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 203/422 (48%), Gaps = 14/422 (3%)
Query: 42 FRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
F RM + P+ T + A A+++D + +H K V T ++ +Y+
Sbjct: 199 FARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYS 258
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
KC ++ A LFD M D+ ++NA+I G++ G + + LF + +G+ + T++
Sbjct: 259 KCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVA 318
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L H L + +H F + G A+ V + + + ND++ A F + E
Sbjct: 319 LIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPE-- 376
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+T+ SWN++I G + ++ + M+ RP+ T+ S LS+C AL G+ +
Sbjct: 377 KTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWL 436
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + +V V+ LI MY+KCG I AR +F+ M ++ VSW AMI+GY G
Sbjct: 437 HRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQG 496
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWF----DNYACSGGLKDNVM 395
EAL+L+ M A +P T LS++ C G +E G K F D+YA + G++
Sbjct: 497 AEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEH--- 553
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVS--WTTMIAGCALNGEFVEALDLFHQMME 453
C ++D+ + G + +A EL P+ V W ++ C ++ + A ++ E
Sbjct: 554 -CTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFE 612
Query: 454 LD 455
LD
Sbjct: 613 LD 614
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 3/273 (1%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
LF + + PN+ T + + L +Q +HG ++KS F ++ V T + ++
Sbjct: 300 LFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHC 359
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
+ + ++ A K FD MP++ + SWNAMI G+AQ G E + LF M + ++ + +T+
Sbjct: 360 RLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISS 419
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
A LSL K +H ++ +V V I YAKC + A +F ++
Sbjct: 420 TLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDN-- 477
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RL 279
+ VVSWN++I G + ++L Y+ M+ P T +S+L +C + +G ++
Sbjct: 478 KNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKV 537
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
S Y + + ++ + + G + A
Sbjct: 538 FRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEA 570
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I A+ LF +M K ++ PN +T ACA+L + +H
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLH 437
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I + +++V T ++DMYAKC + A ++F+ M +++V SWNAMI G+ G
Sbjct: 438 RIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGA 497
Query: 138 KVLCLFYNM---RLVGIQADFVTVM-GLTQAAIHAKHLSLLKSV-HSFGIHIGVDADVSV 192
+ L L+ +M L+ A F++V+ + + + + +S+ + I+ G++
Sbjct: 498 EALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEH---- 553
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS---WNSIIGGC 233
C + + LK A F I E ++ V W +++G C
Sbjct: 554 CTCMVDLLGRAGQLKEA---FELISEFPKSAVGPGVWGALLGAC 594
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 308/576 (53%), Gaps = 36/576 (6%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYA--KCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ I +V + + F + +V A + LD ++ ++ + +V SWNA I G+
Sbjct: 74 KQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYV 133
Query: 132 QMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ G +E L+ M L G ++ D T L + L V + G + D+
Sbjct: 134 ESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDI 193
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N I+ C +L +A VF + +R +V+WNS+I GC +++ Y+ M
Sbjct: 194 FVHNASITMLLSCGELSVAYDVFN--KSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEME 251
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ RP+ T++ ++SSC + L G+ H + +G + + + N L+ MY KCG++
Sbjct: 252 AEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELL 311
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLD----------------------------- 341
+AR LFD M +T VSWT M+ GYA+ G LD
Sbjct: 312 TARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQ 371
Query: 342 --EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
EAL LF M+ PD VT+++ +S C Q GAL++G W +Y L +V + A
Sbjct: 372 GKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTA 431
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+DMY+KCG+I A ++F +P++ ++WT +I G AL+G +AL F +M+ + + P+
Sbjct: 432 LVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPD 491
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TFL VL AC H G +E+G YF+ M+ + V+P+L HYSCM DLLGR G L+EA + V
Sbjct: 492 EITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELV 551
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
++MP+ +DA + G L AC+++ N++IGE A++L E++P + YV +A++Y+ W
Sbjct: 552 KNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ R +M V+K PG SLV ING F V D
Sbjct: 612 EARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRD 647
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 209/442 (47%), Gaps = 33/442 (7%)
Query: 13 IYRSSTIN--QWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSD 69
+YR +N WN+ IR V+ + +L++RM ++P+N T+P + K C
Sbjct: 114 LYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYS 173
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ GH++K F DIFV + M C L AY +F+K RD+ +WN+MI G
Sbjct: 174 SCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITG 233
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G + + ++ M ++ + +T++G+ + + L+L K H + G++
Sbjct: 234 CVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFT 293
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGL----------------------------- 220
+ + N + Y KC +L A ++F + +
Sbjct: 294 IPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPE 353
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
++VV WN+II GC + ++L + M PD T+V+ LS+C AL G +
Sbjct: 354 KSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWI 413
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + + +DV++ L+ MY+KCG+I A +F+ + R ++WTA+I G A G+
Sbjct: 414 HHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNA 473
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNA 399
+AL F M G VPD +T L ++S C G +E G K+F + + + +
Sbjct: 474 QDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSC 533
Query: 400 LIDMYSKCGSIGDARELFYALP 421
++D+ + G + +A EL +P
Sbjct: 534 MVDLLGRAGHLEEAEELVKNMP 555
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L KI S + WN+ I V + +AL LF M+ IEP+ +T AC++L
Sbjct: 348 LYKIPEKSVV-PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGA 406
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
IH +I + D+ + T +VDMYAKC + A ++F+++P R+ +W A+I G
Sbjct: 407 LDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICG 466
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
A G + L F M +GI D +T +G+ A H
Sbjct: 467 LALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHG 505
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/600 (32%), Positives = 317/600 (52%), Gaps = 2/600 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K+ S I WN I V+ K+L L+ K + + + +F AC+
Sbjct: 607 KLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLD 666
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ + +H ++K F D +V T+++ MYAK ++ A K+FD++ D++V NAMI F
Sbjct: 667 FGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFI 726
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G L L+ M+ D T+ L ++VH+ I + ++V+
Sbjct: 727 GNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVA 786
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ + ++ Y KC + A+ VF ++E R VV+W S+I G +F D+L+ +R M
Sbjct: 787 IQSALLTMYYKCGSTEDADSVFYTMKE--RDVVAWGSMIAGFCQNRRFKDALDLFRAMEK 844
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G + D + S++S+ + E + G L+H I G + DV V +L+ MYSK G +S
Sbjct: 845 EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAES 904
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F M ++ V+W +MIS Y+ G + ++ L + G D V++ +++
Sbjct: 905 AEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSS 964
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
AL GK Y + ++ V NALIDMY KCG + A+ +F +P + +V+W +M
Sbjct: 965 VAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSM 1024
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
IAG +G EA+ LF +M + P+ VTFLA++ +C+H+G +E+G F LM Y
Sbjct: 1025 IAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYG 1084
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V P + HY+ + DLLGR G+L +A F++ MPI +D +W LL AC+ HRN+E+GE VA
Sbjct: 1085 VEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVA 1144
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
L ++EP + YV + N+Y WD ANLR MK +KK PG S + + + F
Sbjct: 1145 DNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVF 1204
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 264/548 (48%), Gaps = 10/548 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN I + L F RM++ I P+ + + C +LS ++ + IHG
Sbjct: 512 ITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHG 571
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFLE 137
+I+++ F D +++T ++ MY+ C R A+ LF K+ +R ++ +WN MI GF + G E
Sbjct: 572 YIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWE 631
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
K L L+ + + + G A H + L + VH I + D VC + +
Sbjct: 632 KSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLL 691
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ YAK ++ A+ VF + + + V N++I + D+L Y M D
Sbjct: 692 TMYAKSGSVEDAKKVFDQVLD--KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVD 749
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ SLLS C + GR VH+ I +V++ + L++MY KCG + A +F
Sbjct: 750 SFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFY 809
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M +R V+W +MI+G+ Q +AL LF AME G D + S+IS +EL
Sbjct: 810 TMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVEL 869
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G +A GL+ +V V +L+DMYSK G A +F ++P K +V+W +MI+ +
Sbjct: 870 GHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSW 929
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG +++L Q+++ + V+ VL A + L KG ++ Q+ +L
Sbjct: 930 NGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRL-QIPSDLQ 988
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF-E 556
+ + D+ + G LK A ++MP + + W +++ H N E A RLF E
Sbjct: 989 VENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCE----EAVRLFKE 1043
Query: 557 LEPHSAAP 564
++ AP
Sbjct: 1044 MKRSETAP 1051
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 222/451 (49%), Gaps = 8/451 (1%)
Query: 25 QIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSP 84
+I+ V + + +AL L + + + TFP + K CA LS+ + + IH IV
Sbjct: 412 EIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471
Query: 85 FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-----DVASWNAMIVGFAQMGFLEKV 139
SD ++ T++++MY KC L A ++FDKM + D+ WN +I G+ + G E+
Sbjct: 472 LQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEG 531
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L F M+ +GI+ D ++ + + +H + I + D + I
Sbjct: 532 LAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGM 591
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y+ C+ A +F G E +V+WN +IGG ++ SL Y + +
Sbjct: 592 YSSCSRPMEAWSLF-GKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSA 650
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ ++C E L GR VH I F D V +L++MY+K G ++ A+ +FD +
Sbjct: 651 SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV 710
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELG 378
D+ AMIS + G +AL L+ M+ AGE P D T+ S++SGC G+ + G
Sbjct: 711 LDKEVELRNAMISAFIGNGRAYDALGLYNKMK-AGETPVDSFTISSLLSGCSVVGSYDFG 769
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ ++ NV + +AL+ MY KCGS DA +FY + E+ VV+W +MIAG N
Sbjct: 770 RTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQN 829
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
F +ALDLF M + ++ + +V+ A
Sbjct: 830 RRFKDALDLFRAMEKEGVKADSDVMTSVISA 860
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 315/596 (52%), Gaps = 3/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V+ A + MK+ + + TF I K A Q +H IV
Sbjct: 70 WNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIV 129
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++ + ++DMYAKC+R++ AY +F MP R+ SWNA+I GF Q+G +
Sbjct: 130 KIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFW 189
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M+ G++ + T L K L +H I G++ ++CN ++AY+
Sbjct: 190 LLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYS 249
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L+ A+ VF G G R +V+WNS++ DK +D+ N + M GF PD+ T
Sbjct: 250 ECGLLEDAKRVFDG-AVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTY 308
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARFLFDGM 319
++S+C G+ H+ I G + V++ N LI+MY K + +++A LF M
Sbjct: 309 TCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSM 368
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ RVSW ++++G++Q G ++AL+LF M ++ E D +++ C L+LG+
Sbjct: 369 KSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQ 428
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G N V ++LI MYSKCG I DA + F +++ ++W +++ A +G
Sbjct: 429 QIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHG 488
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ ALDLF M E +++ + VTF+AVL AC+H G +E+G M Y + P + HY
Sbjct: 489 QGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHY 548
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C DL GR G L+EA + SMP + +A + TLL AC+ NIE+ VA +L E+EP
Sbjct: 549 ACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEP 608
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N+Y RWD A++ +M+ +VKK PG S + + + F ED
Sbjct: 609 EEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAED 664
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 7/410 (1%)
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ H KS S I+V ++ Y+KC L+ A KLFD+MP +D +WN MI G+ +
Sbjct: 20 LTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVE 79
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G L +M+ G QAD T + + HA L + VHS + IG + V
Sbjct: 80 SGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYA 139
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ + YAKC ++ A VF+G+ +R VSWN++I G D + M +
Sbjct: 140 GSALLDMYAKCERVEDAYDVFQGMP--VRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKE 197
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G R + T LL+ + +H I +G + ++ N ++ YS+CG ++ A
Sbjct: 198 GVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDA 257
Query: 313 RFLFDGMC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ +FDG R V+W +M+ Y ++A LF M+ G PD+ T +IS C
Sbjct: 258 KRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFA 317
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG--SIGDARELFYALPEKTVVSWT 429
+ GK F GL+++V +CNALI MY K S+ A LF+++ K VSW
Sbjct: 318 AAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWN 377
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+++ G + G +AL LF M + + AVL++C+ L+ G
Sbjct: 378 SILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLG 427
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 125/293 (42%), Gaps = 9/293 (3%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARFLFDGMCDRTRVSWTAM 330
AL L H G + V N ++ YSKC GD++ A LFD M + V+W M
Sbjct: 14 ALYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTM 73
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
I+GY + G+L A +M+ G D T S++ G + +LG+ + G
Sbjct: 74 ITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGY 133
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ +V +AL+DMY+KC + DA ++F +P + VSW +I G G+ A L
Sbjct: 134 EQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDC 193
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK- 509
M + +R TF +L F + L K+ + E + C A L
Sbjct: 194 MQKEGVRVEDGTFAPLLTLLDGDKFYKLT---MQLHCKIIKHGLEFYNALCNATLTAYSE 250
Query: 510 -GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE--IGEYVAYRLFELEP 559
G L++A D W ++L A +H E ++ + F EP
Sbjct: 251 CGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEP 303
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/600 (32%), Positives = 317/600 (52%), Gaps = 2/600 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K+ S I WN I V+ K+L L+ K + + + +F AC+
Sbjct: 202 KLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLD 261
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ + +H ++K F D +V T+++ MYAK ++ A K+FD++ D++V NAMI F
Sbjct: 262 FGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFI 321
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G L L+ M+ D T+ L ++VH+ I + ++V+
Sbjct: 322 GNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVA 381
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ + ++ Y KC + A+ VF ++E R VV+W S+I G +F D+L+ +R M
Sbjct: 382 IQSALLTMYYKCGSTEDADSVFYTMKE--RDVVAWGSMIAGFCQNRRFKDALDLFRAMEK 439
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G + D + S++S+ + E + G L+H I G + DV V +L+ MYSK G +S
Sbjct: 440 EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAES 499
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F M ++ V+W +MIS Y+ G + ++ L + G D V++ +++
Sbjct: 500 AEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSS 559
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
AL GK Y + ++ V NALIDMY KCG + A+ +F +P + +V+W +M
Sbjct: 560 VAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSM 619
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
IAG +G EA+ LF +M + P+ VTFLA++ +C+H+G +E+G F LM Y
Sbjct: 620 IAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYG 679
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V P + HY+ + DLLGR G+L +A F++ MPI +D +W LL AC+ HRN+E+GE VA
Sbjct: 680 VEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVA 739
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
L ++EP + YV + N+Y WD ANLR MK +KK PG S + + + F
Sbjct: 740 DNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVF 799
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 218/453 (48%), Gaps = 27/453 (5%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
NS+I+ V + + +AL L + + + TFP + K CA LS+ + + IH IV
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-----DVASWNAMIVGFAQMGFLE 137
SD ++ T++++MY KC L A ++FDKM + D+ WN +I G+ + G E
Sbjct: 84 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F M+ + M Q +H + I + D + I
Sbjct: 144 EGLAQFCRMQ------ELSWYMAGRQ-------------IHGYIIRNMFEGDPYLETALI 184
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+ C+ A +F G E +V+WN +IGG ++ SL Y + +
Sbjct: 185 GMYSSCSRPMEAWSLF-GKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLV 243
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ ++C E L GR VH I F D V +L++MY+K G ++ A+ +FD
Sbjct: 244 SASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFD 303
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALE 376
+ D+ AMIS + G +AL L+ M+ AGE P D T+ S++SGC G+ +
Sbjct: 304 QVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK-AGETPVDSFTISSLLSGCSVVGSYD 362
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ ++ NV + +AL+ MY KCGS DA +FY + E+ VV+W +MIAG
Sbjct: 363 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 422
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
N F +ALDLF M + ++ + +V+ A
Sbjct: 423 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISA 455
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 30/299 (10%)
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
S NS I K+ +L + + T SLL +C L GR +H+
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-----WTAMISGYAQKGD 339
+ G D + +LI+MY KCG + SA +FD M + + W +I GY + G
Sbjct: 82 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
+E L F M+ +L ++ G+ Y + + + A
Sbjct: 142 FEEGLAQFCRMQ------ELSWYMA-------------GRQIHGYIIRNMFEGDPYLETA 182
Query: 400 LIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
LI MYS C +A LF L ++ +V+W MI G NG + ++L+L+ + +
Sbjct: 183 LIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKL 242
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA--DLLGRKGKLKEA 515
+F AC+H L+ G + V ++N + + Y C + + + G +++A
Sbjct: 243 VSASFTGAFTACSHGEVLDFGR---QVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDA 298
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 312/573 (54%), Gaps = 13/573 (2%)
Query: 51 EPNNLTFPFIA-KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+P NLT + +A A + + IH +++ + F + T++++MY+KC++++ A
Sbjct: 33 QPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFAL 92
Query: 110 KLF-DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+F D + +V ++NA+I GF GF E+ + MR G+ D T +A +
Sbjct: 93 SIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV 152
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ K +H G++ DV + + ++ Y K ++ A++ F E +R VV WN+
Sbjct: 153 LEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE--ELPIRDVVLWNA 207
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
++ G +F+ L +R M + P TV +LS L GR++H + G
Sbjct: 208 MVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMG 267
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
+D V+V N+LI MY KC I+ A +F+ M ++ SW +++S + Q GD D LRL
Sbjct: 268 YDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLD 327
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALID 402
M AG PDLVTV +++ C AL G+ Y GL D+V++ NA+ID
Sbjct: 328 RMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVID 387
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY+KCGS+ DA +F + K V SW MI G ++G EAL++F +M E+ L+P+ VT
Sbjct: 388 MYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVT 447
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F+ VL AC+HAGF+ +G + M Y V P + HY+C+ D+LGR G+L EA + +M
Sbjct: 448 FVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTM 507
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
PI+++ +W LL AC++H++ + E A R+FELEP YV M+N+Y GR++ V
Sbjct: 508 PIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVL 567
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R M++ V+K PG S + + F D
Sbjct: 568 EVRHTMRQQNVRKTPGCSWIELKNGVHVFVSAD 600
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 216/446 (48%), Gaps = 21/446 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I + + +++M+ + P+ TFP KAC D L + IHG +
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLF 163
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+F+ + +V+ Y K ++ A F+++P RDV WNAM+ G+AQ+G E VL
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 223
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + TV G+ L+ + +H F + +G D+ V+V N+ I Y
Sbjct: 224 TFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F + E + + SWNSI+ D +L M+ G +PD+ TV
Sbjct: 284 KCKCIEDALEIFEMMRE--KDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGF-----DL-DVSVINTLISMYSKCGDIDSARFL 315
++L +C AL+ GR +H + I G D+ DV + N +I MY+KCG + A +
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M ++ SW MI GY G +EAL +F M PD VT + ++S C +G +
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 461
Query: 376 ELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWT 429
G+ F Y + ++ V IDM + G + +A EL +P E V W
Sbjct: 462 SQGRNFLVQMKSKYDVAPTIEHYTCV----IDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD 455
++A C L+ V A ++ EL+
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELE 543
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
++ R I WNS + + L L RM I+P+ +T + AC+ L+ +
Sbjct: 296 EMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALM 355
Query: 72 YSQMIHGHIVKSPFWS------DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+ + IHG+++ S D+ ++ ++DMYAKC + A+ +F++M ++DVASWN
Sbjct: 356 HGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNI 415
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
MI+G+ G+ + L +F M V ++ D VT +G+ A HA +S
Sbjct: 416 MIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 462
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 10/190 (5%)
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
A+++ + +L T ++ + L GK +Y G ++ + +LI+MYSKC
Sbjct: 27 AIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCN 86
Query: 409 SIGDARELFY-ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ A +F E V ++ +I+G NG E + + +M + P++ TF +
Sbjct: 87 QMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAI 146
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIK 525
+AC ++K G +++ EL+ + S + + + G ++ A + +PI+
Sbjct: 147 KACLDVLEIKKIHGL------LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR 200
Query: 526 SDAGIWGTLL 535
D +W ++
Sbjct: 201 -DVVLWNAMV 209
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 312/601 (51%), Gaps = 9/601 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKN--DIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN+ I + K+L++FRRM K N + +CA + + IHG
Sbjct: 108 WNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGF 167
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-----RDVASWNAMIVGFAQMG 134
+VK SD F+ + +++MY KC + A +F+++ D R++A WN MI+G+
Sbjct: 168 LVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNE 227
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
L L LF M +GI D TV+ + L++ K +H + +G+D DV V
Sbjct: 228 CLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGT 287
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y KC D + + +F+ + +V W S++ C +++L F+ + D
Sbjct: 288 ALMEMYFKCGDPETSLQIFKRSQN--HNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCG 345
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD +++ L +C +G +H I GFD DV V L+ Y KCGD++ A+
Sbjct: 346 FPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQ 405
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F G+ R VSW A+ISG+AQ DEAL+ F M++ P+ VT+ ++S C
Sbjct: 406 VFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSV 465
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ L K Y + N +V N+LI Y+KCG I +R +F LP + V+W +++ G
Sbjct: 466 MILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLG 525
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
++G E F +M E +++P+ TF ++L +C+H+G ++ GW YFN M + Y + P
Sbjct: 526 FGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEP 585
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ Y+CM DLLGR G L +A D + SMP D IWG+LL +CK H N ++ E VA +
Sbjct: 586 RVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHI 645
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
FEL+ S V +AN+Y G + V +RT +K+ +KK PG S + ++ F
Sbjct: 646 FELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAG 705
Query: 615 D 615
D
Sbjct: 706 D 706
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 247/551 (44%), Gaps = 44/551 (7%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
FP + KA L D + IHGH++K F DIFV+ +++ MY KC A +F++M
Sbjct: 42 FPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERME 101
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLL 174
+RD SWN MI GF Q G K L +F M G + V + + K L+
Sbjct: 102 ERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHG 161
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL---RTVVSWNSIIG 231
+H F + GVD+D + + I Y KC D+K AE VF I + R + WN +I
Sbjct: 162 LEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMIL 221
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + +L + M+ G PD +TVV +L C L G+ +H + G D
Sbjct: 222 GYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDD 281
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
DV V L+ MY KCGD +++ +F + V W +++ AQ G +EAL F
Sbjct: 282 DVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFM 341
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
PD V +L+ + C G +A G +V V AL+D Y KCG +
Sbjct: 342 LDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDME 401
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A+++FY L + +VSW +I+G A N EAL F M ++PN VT +L CT
Sbjct: 402 YAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCT 461
Query: 472 HAG----------FLEKGWGYFNLMTK------------------VYQVNPELNHYSCMA 503
H +L + W N + V++ P N + +
Sbjct: 462 HLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNS 521
Query: 504 DLL-----GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE-- 556
LL GR ++ + ++ IK D G + +LL +C ++ G ++ F
Sbjct: 522 ILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAG----WKYFNSM 577
Query: 557 LEPHSAAPYVE 567
+E ++ P VE
Sbjct: 578 MEDYNLEPRVE 588
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 8/254 (3%)
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFR-PDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
N +I CT F+D++ Y I GF + L+ + + +G+ +H H +
Sbjct: 7 NRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLL 66
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
+GF D+ V N+L+ MY KCG +A +F+ M +R VSW MISG+ Q GD ++L
Sbjct: 67 KFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLV 126
Query: 346 LFFAM--EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+F M E G + V L+ +S C L G + G+ + + +ALI+M
Sbjct: 127 MFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEM 186
Query: 404 YSKCGSIGDARELFYALPEKTVVS-----WTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
Y KCG I +A +F + + +V W MI G N AL+LF +M+EL + P
Sbjct: 187 YMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISP 246
Query: 459 NRVTFLAVLQACTH 472
+ T + VL C+
Sbjct: 247 DSSTVVVVLVLCSQ 260
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 303/552 (54%), Gaps = 17/552 (3%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+Q IH HIVK+ D F+ T +V++YAKC ++ A K+FD++P R+V SW ++ G+
Sbjct: 88 AQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVH 147
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAA--IHAKHLSLLKSVHSFGIHIGVDADV 190
E + +F M G T+ A+ +H+K L K +H + I ++ D
Sbjct: 148 DSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELG--KQIHGYSIKYRIEFDA 205
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
S+ N+ S Y+KC L+ A FR I + + V+SW ++I + L F+ M+
Sbjct: 206 SIGNSLCSLYSKCGSLECAVKAFRRIRD--KNVISWTTVISAWGDNGEAATGLQFFVEML 263
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ P+ T+ S LS C ++L G +HS I GF+ ++ + N+++ +Y KCG I
Sbjct: 264 SECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIH 323
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQ-----KGDL------DEALRLFFAMEAAGEVPDL 359
A+ LFD M + V+W AMI+G+A+ K DL EAL +F + +G PDL
Sbjct: 324 EAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDL 383
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T S++S C ALE G+ G +V+V AL++MY+KCGSI A + F
Sbjct: 384 FTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVE 443
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ +T++SWT+MI G A NG+ +AL LF M +RPN++TF+ VL AC+HAG +++
Sbjct: 444 MSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEA 503
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
YF +M Y++ P ++HY+C+ D+ R G+L EA DF++ M ++ + IW L+ C+
Sbjct: 504 LDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCR 563
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
+E+G Y A +L L+P Y + N+Y G+W V+ +R MMK ++ +
Sbjct: 564 SQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDW 623
Query: 600 SLVHINGKTCTF 611
S + I K +F
Sbjct: 624 SWISIKDKIYSF 635
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 219/478 (45%), Gaps = 50/478 (10%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR N + W + + V ++ A+ +FR M + P N T A + L
Sbjct: 131 PRRNVV-------SWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDL 183
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ IHG+ +K D + ++ +Y+KC L+CA K F ++ D++V SW +I
Sbjct: 184 HSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVI 243
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
+ G L F M ++ + T+ + L + +HS I +G +
Sbjct: 244 SAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFE 303
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF--DD---- 241
+++ + N+ + Y KC + A+ +F +E ++V+WN++I G F DD
Sbjct: 304 SNLPIKNSIMYLYLKCGWIHEAKKLFDEMET--ISLVTWNAMIAGHARMMDFAKDDLAAH 361
Query: 242 -----SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+L+ + + G +PD+ T S+LS C AL QG VH+ I GF DV V
Sbjct: 362 QCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVG 421
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
L++MY+KCG I+ A F M RT +SWT+MI+GYAQ G +AL LF M AG
Sbjct: 422 TALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVR 481
Query: 357 PDLVTVLSMISGCGQSGALE--------------LGKWFDNYACSGGLKDNVMVCNALID 402
P+ +T + ++S C +G ++ + D+YAC LID
Sbjct: 482 PNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYAC-------------LID 528
Query: 403 MYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
M+ + G + +A + + E W+ +IAGC G+ L + L+L+P
Sbjct: 529 MFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKL--ELGFYAAEQLLNLKPK 584
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 170/341 (49%), Gaps = 13/341 (3%)
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
G + + + + Q I K +S + +H+ + G D + ++ YAKC ++ A
Sbjct: 64 GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETA 123
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
VF + R VVSW +++ G + K + ++ +R M+ G P T+ + LS+
Sbjct: 124 RKVFDELPR--RNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASS 181
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
+ G+ +H + I Y + D S+ N+L S+YSKCG ++ A F + D+ +SWT
Sbjct: 182 DLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTT 241
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+IS + G+ L+ F M + P+ T+ S +S C +L++G + G
Sbjct: 242 VISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLG 301
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF-------- 441
+ N+ + N+++ +Y KCG I +A++LF + ++V+W MIAG A +F
Sbjct: 302 FESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAH 361
Query: 442 ---VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EAL +F ++ ++P+ TF +VL C+ LE+G
Sbjct: 362 QCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQG 402
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 130/251 (51%), Gaps = 4/251 (1%)
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
F ++L+F R +G + + V +L C+ + + + +H+H + G D ++
Sbjct: 54 FREALSFIR----EGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTF 109
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+++Y+KCG +++AR +FD + R VSWT +++GY + A+++F M AG P
Sbjct: 110 LVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPT 169
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
T+ + +S + ELGK Y+ ++ + + N+L +YSKCGS+ A + F
Sbjct: 170 NYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFR 229
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ +K V+SWTT+I+ NGE L F +M+ + PN T + L C L+
Sbjct: 230 RIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDI 289
Query: 479 GWGYFNLMTKV 489
G +L K+
Sbjct: 290 GTQIHSLTIKL 300
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 302/599 (50%), Gaps = 30/599 (5%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+N WN I V AL +F RM +PN +T I AC L + IH
Sbjct: 318 TVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIH 377
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
K +++V+ +++DMY+KC D A K+F K +++ A WN MI + G +E
Sbjct: 378 XIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVE 437
Query: 138 KVLCLFYNMRLVGIQADFVT----VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
L L +M+ G + D +T + G + + + LL + + +G+ +V
Sbjct: 438 DALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEM----VQMGLKPNVVSF 493
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N IS + + A VFR ++ S GC + + S+
Sbjct: 494 NVLISGFQQSGLSYEALKVFRIMQ----------SPSDGCNPNEVLNLSM---------- 533
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
RP+ T+ L +C QG+ +H + + GF+ ++ V + L+ MY+KC D+DSA
Sbjct: 534 -RPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSAN 592
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F + R VSW A+++GY +EAL+LF M G P +T + + CG
Sbjct: 593 KVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIA 652
Query: 374 ALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
A+ G+ YA L + + +ALIDMY+KCGSI DA+ +F + EK V W MI
Sbjct: 653 AIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMI 712
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+ +++G A +F QM L + P+ +TF+++L AC G +E+GW YFN M Y V
Sbjct: 713 SAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGV 772
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
L HY+CM +LG G L EALDF++ MP DA +W TLL AC++H N EIGE A
Sbjct: 773 AATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAK 832
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
LFELEP +A Y+ ++NIY G WD NLR+ M+ ++ S + + CTF
Sbjct: 833 ALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTF 891
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 207/455 (45%), Gaps = 56/455 (12%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ + + IR + + FR M + P+ P I KAC+ + +M+H
Sbjct: 147 TVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVH 206
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G +++ SD+FV ++ Y+ C L + +F M +RDV SW A+I + + G +
Sbjct: 207 GFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXD 266
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ +F+ M+L G++ D ++ L +
Sbjct: 267 EAKHIFHLMQLDGVKPDLISWSAL-----------------------------------L 291
Query: 198 SAYAKCNDLKMA-ELVFRGIEEGLR-TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
S +A+ ++ +A E + E GL+ TV SWN II GC +D+L+ + M++
Sbjct: 292 SGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPED 351
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P++ T+ S+L +C +AL G+ +H +G +V V ++I MYSKCG D A +
Sbjct: 352 PNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKV 411
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F ++ W MI+ Y +G +++AL L +M+ G PD++T +++SG ++G
Sbjct: 412 FXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLK 471
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ GLK NV+ N LI + + G +A ++F + + GC
Sbjct: 472 TQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPS--------DGC 523
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
N +++ L +RPN +T L AC
Sbjct: 524 NPN-----------EVLNLSMRPNPITITGALPAC 547
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 209/472 (44%), Gaps = 49/472 (10%)
Query: 64 CAKLSDFLYSQMIHGHIVK--SPFWSDIFVQTTMVDMYAKCD-RLDCAYKLFDKMPDRDV 120
C+ LS+F + IH +VK + W + +V +Y K L+ A KL D++P+R V
Sbjct: 93 CSTLSEF---RQIHARVVKLNALKWKSS-IGNKLVVLYCKNQWSLEDARKLLDEIPNRTV 148
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
++ A+I + + +++ F M G+ D V + +A + K VH F
Sbjct: 149 PAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGF 208
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
I V++DV V N I Y+ C DL + VF ++E R VVSW ++I D
Sbjct: 209 VIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQE--RDVVSWTALISAYMEEGLXD 266
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++ + + M DG +PD+ + +LLS
Sbjct: 267 EAKHIFHLMQLDGVKPDLISWSALLSG--------------------------------- 293
Query: 301 SMYSKCGDIDSARFLFDGMCDR----TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+++ G+ID A + M +R T SW +ISG Q G L++AL +F M E
Sbjct: 294 --FARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPED 351
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+++T+ S++ C AL LGK A G+ NV V ++IDMYSKCGS A ++
Sbjct: 352 PNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKV 411
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F K W MIA G+ +AL L M + +P+ +T+ +L G
Sbjct: 412 FXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLK 471
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
+ + M ++ + P + ++ + + G EAL + M SD
Sbjct: 472 TQAXELLSEMVQM-GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDG 522
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 145/300 (48%), Gaps = 11/300 (3%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHY-GFDLDVSVINTLISMYSKCG-DIDSARF 314
+++ +SLL+ C L + R +H+ + S+ N L+ +Y K ++ AR
Sbjct: 82 EISDSISLLNRC---STLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARK 138
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
L D + +RT ++ A+I Y + DE F M G +PD V +++ C
Sbjct: 139 LLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLL 198
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+GK + ++ +V V NALI YS CG +G +R +F+++ E+ VVSWT +I+
Sbjct: 199 XRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISA 258
Query: 435 CALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G EA +FH +M+LD ++P+ +++ A+L G ++ M + +
Sbjct: 259 YMEEGLXDEAKHIFH-LMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPE-RGLQ 316
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIGEYV 550
P +N ++ + + G L++ALD M P + ++L AC + + +G+ +
Sbjct: 317 PTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAI 376
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 254/430 (59%), Gaps = 3/430 (0%)
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+D + + N ++ YAKC L A +F E + +V+W ++I G + ++ D+L
Sbjct: 119 LDNHLVLQNIIVNMYAKCGCLDDARRMFD--EMPTKDMVTWTALIAGFSQNNRPRDALLL 176
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M+ G +P+ T+ SLL + L G +H+ + YG+ V V + L+ MY++
Sbjct: 177 FPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYAR 236
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG +D+A+ FDGM ++ VSW A+ISG+A+KG+ + AL L + M+ P T S+
Sbjct: 237 CGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
S C GALE GKW + GLK + N L+DMY+K GSI DA+ +F L + V
Sbjct: 297 FSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW TM+ GCA +G E LD F QM+ + + PN ++FL VL AC+H+G L++G YF L
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M K Y+V P++ HY DLLGR G L A F++ MPI+ A +WG LL AC++H+N+E
Sbjct: 417 MKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNME 475
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+G Y A R FEL+PH + P + ++NIYA GRW VA +R MMK + VKK P S V I
Sbjct: 476 LGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIE 535
Query: 606 GKTCTFTVED 615
F D
Sbjct: 536 NAVHLFVAND 545
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 205/413 (49%), Gaps = 4/413 (0%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCD 103
+++ + P+ + + K C +L +++H H+V S F + + +Q +V+MYAKC
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
LD A ++FD+MP +D+ +W A+I GF+Q L LF M +G+Q + T+ L +
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A+ L +H+F + G + V V + + YA+C + A+L F G+ ++
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPT--KSE 255
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWN++I G + + +L+ M F+P T S+ S+C AL QG+ VH+H
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAH 315
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
I G L + NTL+ MY+K G ID A+ +FD + VSW M++G AQ G E
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
L F M G P+ ++ L +++ C SG L+ G ++ ++ +V +D+
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDL 435
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G + A +P E T W ++ C ++ + + ELD
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELD 488
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 141/311 (45%), Gaps = 3/311 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N ALLLF +M + ++PN+ T + KA +H +
Sbjct: 157 WTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCL 216
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + S ++V + +VDMYA+C +D A FD MP + SWNA+I G A+ G E L
Sbjct: 217 KYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALH 276
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L + M+ Q T + A L K VH+ I G+ + NT + YA
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYA 336
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + A+ VF + + VVSWN+++ GC ++L+ + M+ G P+ +
Sbjct: 337 KAGSIDDAKRVFDRLVKP--DVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFLFDGMC 320
+ +L++C L +G Y + DV T + + + G +D A RF+ +
Sbjct: 395 LCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPI 454
Query: 321 DRTRVSWTAMI 331
+ T W A++
Sbjct: 455 EPTAAVWGALL 465
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 311/582 (53%), Gaps = 7/582 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I + +AL L+++M + I+P+++TF AC KL D + IH IV
Sbjct: 215 WTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIV 271
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S SD FV + +++MYA+C + A + F+K+ ++ V W +++ + Q + L
Sbjct: 272 SSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALD 330
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ M G+ AD VT + A L K++HS G + V V ++ YA
Sbjct: 331 LYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLV-VHTALLTMYA 389
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L A VF + + R V W ++I ++L Y M+ +G RP+ T
Sbjct: 390 KCGELDAARAVFNRVRQK-RNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTF 448
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++L++C L G +H H + +V+V N L++MY+KCG ++ A+ F+
Sbjct: 449 SNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGR 508
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW AMI YAQ G EAL L+ M + G +PD VT+ S +S C SG+L+LG+
Sbjct: 509 KDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREI 568
Query: 382 DNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + ++MV AL++MY +CG + AR +F + ++ V+SWT M + A G
Sbjct: 569 HSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGH 628
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+ LDL+ +M+ +RPN +TF ++L C+HAG L +G F M ++V P H+
Sbjct: 629 ADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFL 688
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G+L++A V+SMP + D+ W T+L +CK H + + + A R+ EL+P
Sbjct: 689 CMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPE 748
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ + Y +++I+ G ++ MK +KK PGQSL+
Sbjct: 749 NTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLI 790
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 258/490 (52%), Gaps = 10/490 (2%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSP--FWSDIFVQT 93
++AL L+ RM + EP+ +T+ + +C+ + ++ IH I+++P ++ +Q
Sbjct: 126 NRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQN 185
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
+V+MY KC ++ A K+FD + +RD SW +MI +A GF ++ L L+ M GIQ
Sbjct: 186 ALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQP 245
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D +T T A + L K++H+ + +++D V + I+ YA+C D+ A F
Sbjct: 246 DSIT---FTSALLACTKLVDGKAIHARIVSSNMESDF-VGSALINMYARCGDVSSARQAF 301
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
I+ + VV W S++ + ++L+ Y M ++G D T V+ L +C A
Sbjct: 302 EKIQN--KHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGA 359
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV-SWTAMIS 332
L +G+ +HS GF + V L++MY+KCG++D+AR +F+ + + V WTAMIS
Sbjct: 360 LKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMIS 418
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
YAQ G EAL L+ M A G P+ T ++++ C SG LE G + + L
Sbjct: 419 AYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELAS 478
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
NV V NAL+ MY+KCGS+ A+ F A K +VSW MI A +G EALDL+ M
Sbjct: 479 NVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMT 538
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ P+ VT + L AC +G L+ G + + K L + + ++ GR G+L
Sbjct: 539 SQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRL 598
Query: 513 KEALDFVQSM 522
+ A + M
Sbjct: 599 ETARSMFEDM 608
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 262/557 (47%), Gaps = 46/557 (8%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDV 120
+ C +L +++H H++++ + F+ ++ MY C + A F + V
Sbjct: 50 QQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAV 109
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
A +N M+ + + G + L L++ M G + D +T + + L + +H+
Sbjct: 110 ACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHAS 169
Query: 181 GIHIG--VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
I + ++S+ N ++ Y KC ++ A VF GI+ R VSW S+I
Sbjct: 170 IIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKN--RDAVSWTSMISSYANNGF 227
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
D++L+ Y+ M DG +PD T S L +C LV G+ +H+ + + D V +
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSALLACT---KLVDGKAIHARIVSSNMESDF-VGSA 283
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
LI+MY++CGD+ SAR F+ + ++ V WT++++ Y Q EAL L+ M+ G D
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHAD 343
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT ++ + C GAL+ GK + G + +++V AL+ MY+KCG + AR +F
Sbjct: 344 GVTYVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVFN 402
Query: 419 ALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ +K V WT MI+ A G EAL+L+ QM+ RPN TF VL AC+ +G LE
Sbjct: 403 RVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLE 462
Query: 478 KGW----------------------------GYFNLMTKVYQVN--PELNHYSCMADLLG 507
G G L ++ + +L ++ M
Sbjct: 463 AGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYA 522
Query: 508 RKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
+ G +EALD Q+M + D + L AC I ++++G + R+ + + ++
Sbjct: 523 QHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSL 582
Query: 565 YVEMA--NIYALGGRWD 579
V+ A N+Y GR +
Sbjct: 583 MVQTALVNMYGRCGRLE 599
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 163/362 (45%), Gaps = 34/362 (9%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
LL C +L +G+LVH H + G + + N LI MY CG+I AR F
Sbjct: 48 LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107
Query: 324 RVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
V+ + M+S Y + G + AL L+ M G PD +T ++ C G+L +
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167
Query: 383 NYACSGG--LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
++DN+ + NAL++MY KCGS+ +AR++F + + VSWT+MI+ A NG
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACT--------HAGFLEK-------GWGYFNL 485
EALDL+ QM ++P+ +TF + L ACT HA + G N+
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSNMESDFVGSALINM 287
Query: 486 MTKVYQVNP--------ELNHYSCMADLLG---RKGKLKEALDFVQSMP---IKSDAGIW 531
+ V+ + H C L+ + +EALD M + +D +
Sbjct: 288 YARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTY 347
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL--RTMMK 589
T L AC ++ G+ + R+FE S + + +YA G D + R K
Sbjct: 348 VTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVFNRVRQK 407
Query: 590 RN 591
RN
Sbjct: 408 RN 409
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N++ + + W + I +AL L+ +M PN TF + AC+ D
Sbjct: 401 FNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGD 460
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
IHGH+ S S++ VQ +V MYAKC L+ A F+ +D+ SWNAMI
Sbjct: 461 LEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGA 520
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDA 188
+AQ G + L L+ M G+ D VT+ A + L L + +HS + + +
Sbjct: 521 YAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRS 580
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V ++ Y +C L+ A +F + G R V+SW ++ D L+ Y
Sbjct: 581 SLMVQTALVNMYGRCGRLETARSMFEDM--GQRDVLSWTAMTSAYAQQGHADQVLDLYLE 638
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
M+ G RP+ T S+L C L +G
Sbjct: 639 MVLHGIRPNEITFTSILVGCSHAGLLARG 667
>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
Length = 570
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 287/536 (53%), Gaps = 9/536 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI-------- 127
IH + +++ T+++ A L A ++FD P RD WN ++
Sbjct: 35 IHARAIVLGVSANLAFATSLIAGAAPAS-LAYARRVFDAAPVRDAYMWNTLLRAHAHSHS 93
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
+ L L+ MR G+ D T + A A+ L ++VH + +D
Sbjct: 94 HSQSSHSHAVDALALYKRMRAAGVAPDHYTYPIVLPACAAARQPRLGRAVHGDAVRFALD 153
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
D V T I+ Y + ++ AELVF RTVVSW +++ G F ++L +
Sbjct: 154 GDGFVRCTLIAMYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYVQNYFFGEALALFS 213
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +G P+ T++S L E L G +VH I GFD ++ + N LI+MY KCG
Sbjct: 214 TMVAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRSGFDANIPLANALIAMYGKCG 273
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
I A LF+GM R+ VSW M++ Y Q GD+ EA++ F M D VT++S++S
Sbjct: 274 SIPMAEALFEGMAVRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLS 333
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
CG+SGALE GKW +A S GL + + N L+DMY+KCG I DAR++F L + VVS
Sbjct: 334 ACGRSGALETGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVVS 393
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W+ MI+ A +G+ EAL LF M +RPN TF AVL AC H+G + +G +FN +
Sbjct: 394 WSAMISAYANHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSIL 453
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
YQ++P L HY+C+ D+LGR G+L EA + ++ M + D +WG L CK+H N+E+
Sbjct: 454 SDYQMSPTLEHYACIVDMLGRAGRLVEAYEIIRGMSLCPDKCVWGAFLGGCKLHSNLELA 513
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
E+VA LF+ + YV M+N+Y G + +R MK ++KK G S V+
Sbjct: 514 EFVAKDLFQSGSNDVTFYVLMSNMYFEAGMLEDAERIRRAMKEMELKKTAGHSAVN 569
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 228/452 (50%), Gaps = 23/452 (5%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL L++RM+ + P++ T+P + ACA + +HG V+ D FV+ T++
Sbjct: 105 ALALYKRMRAAGVAPDHYTYPIVLPACAAARQPRLGRAVHGDAVRFALDGDGFVRCTLIA 164
Query: 98 MYAKCDRLDCAYKLFDKM--PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
MY + + A +F + R V SW AM+ G+ Q F + L LF M G+ +
Sbjct: 165 MYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNE 224
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
+T++ + L + VH F I G DA++ + N I+ Y KC + MAE +F G
Sbjct: 225 ITLISFLPCLQGQEWLDAGEMVHGFVIRSGFDANIPLANALIAMYGKCGSIPMAEALFEG 284
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ +R++VSWN+++ +++ F+ M+ + D T+VS+LS+C AL
Sbjct: 285 M--AVRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALE 342
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G+ VH +G D D + N L+ MY+KCG+I AR +FD + R VSW+AMIS YA
Sbjct: 343 TGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVVSWSAMISAYA 402
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 394
GD +EAL+LF M++ G P+ T +++ CG SG + G K F++ + +
Sbjct: 403 NHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTL 462
Query: 395 MVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIAGCALN-----GEFVEALD 446
++DM + G + +A E+ + P+K V W + GC L+ EFV A D
Sbjct: 463 EHYACIVDMLGRAGRLVEAYEIIRGMSLCPDKCV--WGAFLGGCKLHSNLELAEFV-AKD 519
Query: 447 LFHQMMELDLRPNRVTFLAVLQACT-HAGFLE 477
LF N VTF ++ AG LE
Sbjct: 520 LFQS------GSNDVTFYVLMSNMYFEAGMLE 545
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 14/335 (4%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTF-PFIAKACAKLSDFL-YS 73
S T+ W + + V +AL LF M + PN +T F+ C + ++L
Sbjct: 186 SRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNEITLISFLP--CLQGQEWLDAG 243
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+M+HG +++S F ++I + ++ MY KC + A LF+ M R + SWN M+ + Q
Sbjct: 244 EMVHGFVIRSGFDANIPLANALIAMYGKCGSIPMAEALFEGMAVRSLVSWNTMVAIYEQH 303
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G + + + F+ M + D VT++ + A + L K VH F G+DAD +
Sbjct: 304 GDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDADARIG 363
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYD 252
N + YAKC ++ A VF + +R VVSW+++I +GD +++L + M +
Sbjct: 364 NVLVDMYAKCGEIADARKVFDCLH--VRGVVSWSAMISAYANHGDS-EEALKLFCLMKSE 420
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN--TLISMYSKCGDID 310
G RP+ T ++L +C LV L H + I + + ++ + ++ M + G +
Sbjct: 421 GVRPNSFTFTAVLVAC-GHSGLVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAGRLV 479
Query: 311 SARFLFDGM--CDRTRVSWTAMISGYAQKGDLDEA 343
A + GM C + W A + G +L+ A
Sbjct: 480 EAYEIIRGMSLCP-DKCVWGAFLGGCKLHSNLELA 513
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 303/599 (50%), Gaps = 30/599 (5%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+N WN I V AL +F RM +PN +T I AC L + IH
Sbjct: 9 TVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIH 68
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+K +++V+ +++DMY+KC D A K+F K +++ A WN MI + G +E
Sbjct: 69 AIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVE 128
Query: 138 KVLCLFYNMRLVGIQADFVT----VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
L L +M+ G + D +T + G + + + LL + + +G+ +V
Sbjct: 129 DALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEM----VQMGLKPNVVSF 184
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N IS + + A VFR ++ S GC + + S+
Sbjct: 185 NVLISGFQQSGLSYEALKVFRIMQ----------SPSDGCNPNEVLNLSM---------- 224
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
RP+ T+ L +C QG+ +H + + GF+ ++ V + L+ MY+KC D+DSA
Sbjct: 225 -RPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSAN 283
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F + R VSW A+++GY +EAL+LF M G P +T + + CG
Sbjct: 284 KVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIA 343
Query: 374 ALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
A+ G+ YA L + + +ALIDMY+KCGSI DA+ +F + EK V W MI
Sbjct: 344 AIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMI 403
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+ +++G A +F QM L + P+ +TF+++L AC G +E+GW YFN M Y V
Sbjct: 404 SAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGV 463
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
L HY+CM +LG G L EALDF++ MP DA +W TLL AC++H N EIGE A
Sbjct: 464 AATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAK 523
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
LFELEP +A Y+ ++NIY G WD NLR+ M+ ++ S + + CTF
Sbjct: 524 ALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHICTF 582
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 20/256 (7%)
Query: 217 EEGLR-TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
E GL+ TV SWN II GC +D+L+ + M++ P++ T+ S+L +C +AL
Sbjct: 3 ERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALR 62
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G+ +H+ + +G +V V ++I MYSKCG D A +F ++ W MI+ Y
Sbjct: 63 LGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYV 122
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+G +++AL L +M+ G PD++T +++SG ++G + GLK NV+
Sbjct: 123 NEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVV 182
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
N LI + + G +A ++F + + GC N +++ L
Sbjct: 183 SFNVLISGFQQSGLSYEALKVFRIMQSPS--------DGCNPN-----------EVLNLS 223
Query: 456 LRPNRVTFLAVLQACT 471
+RPN +T L AC
Sbjct: 224 MRPNPITITGALPACA 239
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 420 LPEK----TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+PE+ TV SW +I+GC NG +ALD+F +M+ PN +T ++L ACT
Sbjct: 1 MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 60
Query: 476 LEKG 479
L G
Sbjct: 61 LRLG 64
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 295/542 (54%), Gaps = 2/542 (0%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH +++ D ++ ++ + ++++ D+ + ++ +N MI G
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
++ + ++++MR G+ D T + +A L +HS + G +AD V
Sbjct: 87 DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ I+ Y KC + A VF I + + SW + I G K ++++ +R ++ G
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPD--KNFASWTATISGYVGVGKCREAIDMFRRLLEMG 204
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
RPD ++V +LS+C L G + + G +V V L+ Y KCG+++ AR
Sbjct: 205 LRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERAR 264
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FDGM ++ VSW++MI GYA G EAL LFF M G PD ++ ++ C + G
Sbjct: 265 SVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLG 324
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALELG W N DN ++ ALIDMY+KCG + A E+F + +K V W I+
Sbjct: 325 ALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAIS 384
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A++G +AL LF QM + ++P+R TF+ +L ACTHAG +E+G YFN M V+ +
Sbjct: 385 GLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLT 444
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
PE+ HY CM DLLGR G L EA ++SMP++++A +WG LL C++HR+ ++ E V +
Sbjct: 445 PEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKK 504
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
L LEP + YV ++NIYA +W+ A +R++M VKK PG S + ++G F V
Sbjct: 505 LIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLV 564
Query: 614 ED 615
D
Sbjct: 565 GD 566
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 230/427 (53%), Gaps = 6/427 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ I +N+ IR V + +++ ++ M+K + P++ TFPF+ KACA++ D
Sbjct: 69 KEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGV 128
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +VK+ +D FV+ +++++Y KC +D A+K+FD +PD++ ASW A I G+ +G
Sbjct: 129 KMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVG 188
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + +F + +G++ D +++ + A L + + + G+ +V V
Sbjct: 189 KCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVAT 248
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y KC +++ A VF G+ E + +VSW+S+I G ++L+ + M+ +G
Sbjct: 249 ALVDFYGKCGNMERARSVFDGMLE--KNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGL 306
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSAR 313
+PD +V +L SC AL G S+ I+ LD SV+ T LI MY+KCG +D A
Sbjct: 307 KPDCYAMVGVLCSCARLGALELGDWA-SNLINGNEFLDNSVLGTALIDMYAKCGRMDRAW 365
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F GM + RV W A ISG A G + +AL LF ME +G PD T + ++ C +G
Sbjct: 366 EVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAG 425
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
+E G ++F++ C L + ++D+ + G + +A +L ++P E + W +
Sbjct: 426 LVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGAL 485
Query: 432 IAGCALN 438
+ GC L+
Sbjct: 486 LGGCRLH 492
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 183/362 (50%), Gaps = 6/362 (1%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L LK +H+ + +G+D D + N + + + + +E + +N++I
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKE--PNIFLFNTMI 80
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G D F +S+ Y M +G PD T +L +C G +HS + G +
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCE 140
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D V +LI++Y+KCG ID+A +FD + D+ SWTA ISGY G EA+ +F +
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
G PD +++ ++S C ++G L G+W D Y G+ NV V AL+D Y KCG++
Sbjct: 201 LEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNM 260
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
AR +F + EK +VSW++MI G A NG EALDLF +M+ L+P+ + VL +C
Sbjct: 261 ERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSC 320
Query: 471 THAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
G LE G W + + N L + + D+ + G++ A + + M K D
Sbjct: 321 ARLGALELGDWASNLINGNEFLDNSVLG--TALIDMYAKCGRMDRAWEVFRGMR-KKDRV 377
Query: 530 IW 531
+W
Sbjct: 378 VW 379
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 203/593 (34%), Positives = 315/593 (53%), Gaps = 12/593 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK----NDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
W + + V E K + +M + + PN+ T +AC L + + +H
Sbjct: 185 WTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLH 244
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ VK V + + MY+KCD + A LF ++ ++DV SW +I + + G
Sbjct: 245 GYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAR 304
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF M G+Q D V V + + +++ K+ H+ I V + N+ I
Sbjct: 305 EAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLI 364
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI---YDGF 254
S Y K + +A VF + + R SW+ ++ G L YR M +D F
Sbjct: 365 SMYGKFELVDVAGTVFGMLHQ--RDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEF 422
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
D+T++VS +SSC L G+ VH + I D + S+ N+LI MY +CG+ + A
Sbjct: 423 LCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLD-ENSITNSLIGMYGRCGNFELACK 481
Query: 315 LFD-GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F R V+W A+IS Y+ G ++AL L+ M P+ T++++IS C
Sbjct: 482 IFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLA 541
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALE G+ +Y + GL+ +V + AL+DMY+KCG +G AR +F ++ ++ VV+W MI+
Sbjct: 542 ALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMIS 601
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G ++GE +AL LF +M ++PN +TFLA+L AC HAG +++G F M Y++
Sbjct: 602 GYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLFIRMGG-YRLE 660
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+CM DLLG+ G L+EA D V +MPIK D G+WGTLL ACK+H N E+G VA +
Sbjct: 661 PNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKK 720
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
F +P + Y+ M+N Y +WD + LR MK V+K G S V + G
Sbjct: 721 AFSSDPRNDGYYILMSNSYGSAEKWDEIEKLRDTMKNYGVEKGVGWSAVDVWG 773
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 265/555 (47%), Gaps = 21/555 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS +R ++ AL RRM+ + P+ T P A A A+L+ +H + V
Sbjct: 81 WNSLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSV 140
Query: 82 KSPFWS---DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
K + + V +++V MYA+C L A KLFD+M +RDV +W A++ G + G K
Sbjct: 141 KFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGK 200
Query: 139 VLCLFYNM-RLV---GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+C M RL G + + T+ +A LS + +H + + G+ V +
Sbjct: 201 GICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVS 260
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
S Y+KC+ + A ++F + E + VVSW +IG +++ ++ M G
Sbjct: 261 ALFSMYSKCDMTEDACILFPELTE--KDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGL 318
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD V +LS + +G+ H+ I F V + N+LISMY K +D A
Sbjct: 319 QPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGT 378
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE---VPDLVTVLSMISGCGQ 371
+F + R SW+ M++GY + G + L L+ M+ + D+ +++S IS C +
Sbjct: 379 VFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSR 438
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKTVVSWTT 430
G L LG+ Y+ L +N + N+LI MY +CG+ A ++F A + VV+W
Sbjct: 439 LGRLRLGQSVHCYSIKCLLDENS-ITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNA 497
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I+ + G +AL L+ QM+ D++PN T + V+ AC + LE G + K
Sbjct: 498 LISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGE-LLHSYVKNM 556
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ +++ + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 557 GLESDVSISTALVDMYTKCGQLGTARGIFDSM-LQRDVVTWNVMISGYGMHGEAN----Q 611
Query: 551 AYRLF-ELEPHSAAP 564
A +LF E+E S P
Sbjct: 612 ALKLFSEMEAGSIKP 626
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 7/216 (3%)
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
P L+ +H+ G L+S YS G A F W ++
Sbjct: 25 PPPLIALLRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSL 84
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
+ + D D AL M A+G P T S + AL +G +Y+ GL
Sbjct: 85 LRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGL 144
Query: 391 ---KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
+V V ++L+ MY++CGS+GDA +LF + E+ VV+WT +++GC NGE + +
Sbjct: 145 LAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICY 204
Query: 448 FHQMMEL----DLRPNRVTFLAVLQACTHAGFLEKG 479
QM+ L RPN T + L+AC G L G
Sbjct: 205 LVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAG 240
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 301/543 (55%), Gaps = 38/543 (6%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A K+F+ + D + +N M+ +A+ G L KVL LF +R G+ D T + +A
Sbjct: 150 AEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGC 209
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + + V F + G+D D V N+ I Y + ++++ A+ +F E R VSWN
Sbjct: 210 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFD--EMTTRDSVSWN 267
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
+I G +F+D++N +R M +G +PD TVVS LS+C + L G +H++ +
Sbjct: 268 VMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VR 326
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL------ 340
+ N L+ MY+KCG ++ AR +FD M + + WT+MISGY GDL
Sbjct: 327 KELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDL 386
Query: 341 -------------------------DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
D+A+ LF M+ PD TV+++++GC Q GAL
Sbjct: 387 FDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGAL 446
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E GKW Y + +V+V ALI+MYSKCG + + E+FY L +K SWT++I G
Sbjct: 447 EQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGL 506
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A+NG+ EAL LF +M + +P+ +TF+ VL AC+H G +E+G +FN M KV+++ P+
Sbjct: 507 AMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK 566
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKS---DAGIWGTLLCACKIHRNIEIGEYVAY 552
+ HY C+ DLLGR G L EA + +Q +PI++ ++G LL AC+IH N+++GE +A
Sbjct: 567 VEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAK 626
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+L +E ++ + +ANIYA RW+ +R MK VKK PG SL+ ++G F
Sbjct: 627 KLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFL 686
Query: 613 VED 615
V D
Sbjct: 687 VGD 689
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 218/453 (48%), Gaps = 38/453 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N ++ + K LLLF++++++ + P+ T+PF+ KA L D + + G IV
Sbjct: 165 YNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 224
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D +V +++DMY + ++ A KLFD+M RD SWN MI G+ + E +
Sbjct: 225 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 284
Query: 142 LFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSF-----GIHIGVD-------- 187
F M+ G + D TV+ A K+L L +H++ G +D
Sbjct: 285 TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYA 344
Query: 188 -----------------ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+V + IS Y C DL+ A +F + +R VV W ++I
Sbjct: 345 KCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD--KSPVRDVVLWTAMI 402
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G FDD++ +R M +PD TVV+LL+ C AL QG+ +H +
Sbjct: 403 NGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRIT 462
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+DV V LI MYSKCG +D + +F + D+ SWT++I G A G EALRLF M
Sbjct: 463 MDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEM 522
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
E G PD +T + ++S C G +E G ++F++ ++ V +ID+ + G
Sbjct: 523 ERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGL 582
Query: 410 IGDARELFYALP----EKTVVSWTTMIAGCALN 438
+ +A EL +P E V + +++ C ++
Sbjct: 583 LDEAEELIQEIPIENCEIVVPLYGALLSACRIH 615
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 200/436 (45%), Gaps = 50/436 (11%)
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS--AYAKCNDLKMAELVFRGIEEGLRTVV 224
+ K + LK + S IG++ D N ++ A + +L+ AE +F +++ ++
Sbjct: 106 NCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP--SLF 163
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
+N ++ L ++ + DG PD T +L + C + QG V
Sbjct: 164 VYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFI 223
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ G DLD V N+LI MY + ++++A+ LFD M R VSW MISGY + ++A+
Sbjct: 224 VKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAI 283
Query: 345 RLFFAMEAAG-EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
F M+ G E PD TV+S +S C LELG NY L + NAL+DM
Sbjct: 284 NTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDM 342
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD----------------- 446
Y+KCG + AR +F + K V+ WT+MI+G G+ EA D
Sbjct: 343 YAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMI 402
Query: 447 --------------LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-W--GYFNLMTKV 489
LF +M ++P++ T + +L C G LE+G W GY +
Sbjct: 403 NGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLD----E 458
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
++ ++ + + ++ + G + ++L+ + K D W +++C + N + E
Sbjct: 459 NRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDK-DTASWTSIICGLAM--NGKTSE- 514
Query: 550 VAYRLF-ELEPHSAAP 564
A RLF E+E A P
Sbjct: 515 -ALRLFSEMERVGAKP 529
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 146/367 (39%), Gaps = 40/367 (10%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN I V A+ FR M++ E P+ T AC L + IH ++
Sbjct: 266 WNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 325
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM------------------------- 115
K ++ + ++DMYAKC L+ A +FD+M
Sbjct: 326 RKELGFT-TRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREAR 384
Query: 116 ------PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
P RDV W AMI G+ Q + + LF M++ I+ D TV+ L
Sbjct: 385 DLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLG 444
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L K +H + + DV V I Y+KC + + +F +E+ + SW SI
Sbjct: 445 ALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELED--KDTASWTSI 502
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYG 288
I G K ++L + M G +PD T + +LS+C + +G R +S +
Sbjct: 503 ICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHR 562
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGM----CDRTRVSWTAMISGYAQKGDLDEAL 344
+ V +I + + G +D A L + C+ + A++S ++D
Sbjct: 563 IEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGE 622
Query: 345 RLFFAME 351
RL +E
Sbjct: 623 RLAKKLE 629
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 301/543 (55%), Gaps = 38/543 (6%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A K+F+ + D + +N M+ +A+ G L KVL LF +R G+ D T + +A
Sbjct: 196 AEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGC 255
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + + V F + G+D D V N+ I Y + ++++ A+ +F E R VSWN
Sbjct: 256 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFD--EMTTRDSVSWN 313
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
+I G +F+D++N +R M +G +PD TVVS LS+C + L G +H++ +
Sbjct: 314 VMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VR 372
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL------ 340
+ N L+ MY+KCG ++ AR +FD M + + WT+MISGY GDL
Sbjct: 373 KELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDL 432
Query: 341 -------------------------DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
D+A+ LF M+ PD TV+++++GC Q GAL
Sbjct: 433 FDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGAL 492
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E GKW Y + +V+V ALI+MYSKCG + + E+FY L +K SWT++I G
Sbjct: 493 EQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGL 552
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A+NG+ EAL LF +M + +P+ +TF+ VL AC+H G +E+G +FN M KV+++ P+
Sbjct: 553 AMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK 612
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKS---DAGIWGTLLCACKIHRNIEIGEYVAY 552
+ HY C+ DLLGR G L EA + +Q +PI++ ++G LL AC+IH N+++GE +A
Sbjct: 613 VEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAK 672
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+L +E ++ + +ANIYA RW+ +R MK VKK PG SL+ ++G F
Sbjct: 673 KLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFL 732
Query: 613 VED 615
V D
Sbjct: 733 VGD 735
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 218/453 (48%), Gaps = 38/453 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N ++ + K LLLF++++++ + P+ T+PF+ KA L D + + G IV
Sbjct: 211 YNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 270
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D +V +++DMY + ++ A KLFD+M RD SWN MI G+ + E +
Sbjct: 271 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 330
Query: 142 LFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSF-----GIHIGVD-------- 187
F M+ G + D TV+ A K+L L +H++ G +D
Sbjct: 331 TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYA 390
Query: 188 -----------------ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+V + IS Y C DL+ A +F + +R VV W ++I
Sbjct: 391 KCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD--KSPVRDVVLWTAMI 448
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G FDD++ +R M +PD TVV+LL+ C AL QG+ +H +
Sbjct: 449 NGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRIT 508
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+DV V LI MYSKCG +D + +F + D+ SWT++I G A G EALRLF M
Sbjct: 509 MDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEM 568
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
E G PD +T + ++S C G +E G ++F++ ++ V +ID+ + G
Sbjct: 569 ERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGL 628
Query: 410 IGDARELFYALP----EKTVVSWTTMIAGCALN 438
+ +A EL +P E V + +++ C ++
Sbjct: 629 LDEAEELIQEIPIENCEIVVPLYGALLSACRIH 661
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 200/436 (45%), Gaps = 50/436 (11%)
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS--AYAKCNDLKMAELVFRGIEEGLRTVV 224
+ K + LK + S IG++ D N ++ A + +L+ AE +F +++ ++
Sbjct: 152 NCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP--SLF 209
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
+N ++ L ++ + DG PD T +L + C + QG V
Sbjct: 210 VYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFI 269
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ G DLD V N+LI MY + ++++A+ LFD M R VSW MISGY + ++A+
Sbjct: 270 VKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAI 329
Query: 345 RLFFAMEAAG-EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
F M+ G E PD TV+S +S C LELG NY L + NAL+DM
Sbjct: 330 NTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDM 388
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD----------------- 446
Y+KCG + AR +F + K V+ WT+MI+G G+ EA D
Sbjct: 389 YAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMI 448
Query: 447 --------------LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-W--GYFNLMTKV 489
LF +M ++P++ T + +L C G LE+G W GY +
Sbjct: 449 NGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLD----E 504
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
++ ++ + + ++ + G + ++L+ + K D W +++C + N + E
Sbjct: 505 NRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDK-DTASWTSIICGLAM--NGKTSE- 560
Query: 550 VAYRLF-ELEPHSAAP 564
A RLF E+E A P
Sbjct: 561 -ALRLFSEMERVGAKP 575
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 189/491 (38%), Gaps = 100/491 (20%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN I V A+ FR M++ E P+ T AC L + IH ++
Sbjct: 312 WNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 371
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM------------------------- 115
K ++ + ++DMYAKC L+ A +FD+M
Sbjct: 372 RKELGFT-TRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREAR 430
Query: 116 ------PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
P RDV W AMI G+ Q + + LF M++ ++ D TV+ L
Sbjct: 431 DLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLG 490
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L K +H + + DV V I Y+KC + + +F +E+ + SW SI
Sbjct: 491 ALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELED--KDTASWTSI 548
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G K ++L + M G +PD T + +LS+C SHG
Sbjct: 549 ICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSAC-------------SHG----- 590
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-----WTAMISGYAQKGDLDEAL 344
G ++ R F+ M R+ + +I + G LDEA
Sbjct: 591 -----------------GLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAE 633
Query: 345 RLFFAMEAAGEVPDLVTVL--SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA--- 399
L E E ++V L +++S C +++G+ +N+ C++
Sbjct: 634 ELI--QEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKL------ENIESCDSSIH 685
Query: 400 --LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL---NG---EFVEALDLFHQM 451
L ++Y+ DA+++ + E V + GC+L +G EF+ +M
Sbjct: 686 TLLANIYASVDRWEDAKKVRRKMKELGV----KKMPGCSLIEVDGIVHEFLVGDPSHPEM 741
Query: 452 MELDLRPNRVT 462
ME+ NRVT
Sbjct: 742 MEICSMLNRVT 752
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 313/584 (53%), Gaps = 4/584 (0%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
++ H+AL R+ K E N F + K + +H + K +D FV
Sbjct: 115 HQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVG 174
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
T ++D Y+ +D A +FD + +D+ SW M+ +A+ F E+ L LF MR++G +
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ T+ G ++ + + ++ KSVH + D D+ V + YAK ++ A+ +
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRL 294
Query: 213 FRGIEEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
F EE +T ++ W+ +I D+ ++L+ + M P+ T S+L +C
Sbjct: 295 F---EEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASS 351
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+L G+ +HS + +G + +V V N ++ +Y+KCG+I+++ LF+ + DR V+W +I
Sbjct: 352 VSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTII 411
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
GY Q GD + A+ LF M P VT S++ ALE G +
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ +V N+LIDMY+KCG I DAR F + ++ VSW MI G +++G +EAL+LF M
Sbjct: 472 KDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMM 531
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
D +PN++TF+ VL AC++AG L KG +F M+K Y + P + HY+CM LLGR G+
Sbjct: 532 QHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGR 591
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANI 571
EA+ + + + +W LL AC IH+ +++G A + E+EPH A +V ++N+
Sbjct: 592 FDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNM 651
Query: 572 YALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YA GRWD VA +R M++ +V+K PG S V G F+V D
Sbjct: 652 YATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGD 695
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 256/534 (47%), Gaps = 16/534 (2%)
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+D + + +H HI+K D+F Q +++ Y + + L A KLFD+MP + S+ +
Sbjct: 49 ADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLA 108
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+++ + L + G + + L + + L ++H+ +G
Sbjct: 109 QGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHH 168
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
AD V I AY+ ++ +A VF I + +VSW ++ +++SL +
Sbjct: 169 ADAFVGTALIDAYSVRGNVDVARHVFDDI--CCKDMVSWTGMVACYAENCFYEESLQLFN 226
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G++P+ T+ L SC+ EA G+ VH + +D D+ V L+ +Y+K G
Sbjct: 227 QMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSG 286
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+I A+ LF+ M + W+ MI+ YAQ EAL LF M VP+ T S++
Sbjct: 287 EIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQ 346
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C S +L+LGK + GL NV V NA++D+Y+KCG I ++ +LF LP++ V+
Sbjct: 347 ACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVT 406
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W T+I G G+ A++LF M+E D++P VT+ +VL+A LE G +L
Sbjct: 407 WNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTI 466
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIEI 546
K N + + + D+ + G++ +A M K D W ++C +H ++E
Sbjct: 467 KT-MYNKDTVVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHGMSME- 523
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYAL------GGRWDGVANLRTMMKRNQVK 594
A LF++ H+ ++ + L G + G A+ +M K +K
Sbjct: 524 ----ALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIK 573
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 156/315 (49%), Gaps = 6/315 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+ I + + +AL LF RM++ + PNN TF + +ACA + IH ++
Sbjct: 306 WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL 365
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S++FV ++D+YAKC ++ + KLF+++PDR+ +WN +IVG+ Q+G E+ +
Sbjct: 366 KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMN 425
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M +Q VT + +A+ L +HS I + D V N+ I YA
Sbjct: 426 LFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYA 485
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A L F + + R VSWN++I G + ++LN + M + +P+ T
Sbjct: 486 KCGRINDARLTFDKMNK--RDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTF 543
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLD--VSVINTLISMYSKCGDIDSARFLFDGM 319
V +LS+C L +G+ H + +D+ + ++ + + G D A L +
Sbjct: 544 VGVLSACSNAGLLYKGQ-AHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEI 602
Query: 320 CDRTRV-SWTAMISG 333
+ V W A++
Sbjct: 603 AYQPSVMVWRALLGA 617
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 282/530 (53%), Gaps = 13/530 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I + AL + +M ++ + P+ TF I KAC+ L D + +H H++
Sbjct: 132 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F + I Q ++ MY K + + A +F +M RD+ SW +MI GF+Q+G+ + LC
Sbjct: 192 KSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 251
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-----KSVHSFGIHIGVDADVSVCNTW 196
F M G+ + G +A SLL + +H I G+ DV +
Sbjct: 252 YFKEMLHQGVYLPNEFIFGSVFSACS----SLLQPEYGRQLHGMSIKFGLGRDVFAGCSL 307
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
YAKC L A +VF I G +V+WN+II G YG +++ F+ M + G P
Sbjct: 308 CDMYAKCGLLSCARVVFYQI--GRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIP 365
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TV SLL +C P L QG VH + G DLDV V NTL++MY+KC ++ A F F
Sbjct: 366 DEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFF 425
Query: 317 DGM-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ M C+ VSW A+++ +E L M + PD +T+ +++ ++ ++
Sbjct: 426 EEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSI 485
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E+G YA GL ++ V N LID+Y+KCGS+ AR++F ++ VVSW+++I G
Sbjct: 486 EIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGY 545
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A G EAL LF M LD++PN VTF+ VL AC+H G +E+GW + M K + + P
Sbjct: 546 AQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPT 605
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK-IHRNI 544
H SCM DLL R G L EA F+ M D +W TLL ACK +H+ +
Sbjct: 606 REHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACKSVHQAL 655
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 247/528 (46%), Gaps = 8/528 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L+K+ + N++ + + + NEA KA + KK T+ ++ AC+ L
Sbjct: 21 LSKLRAEQSSNEYITTLCKQKLFNEAIKAFEFLQ--KKTGFCLTLSTYAYLISACSYLRS 78
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + IH H++KS D+ +Q +++MY KC L A K+FD MP+R+V SW ++I G
Sbjct: 79 LEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAG 138
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
++Q G L ++ M G+ D T + +A + L + +H+ + A
Sbjct: 139 YSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAH 198
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ N IS Y K N + A VF + R ++SW S+I G + ++L +++ M
Sbjct: 199 IIAQNALISMYTKSNVIIDALDVFSRM--ATRDLISWGSMIAGFSQLGYELEALCYFKEM 256
Query: 250 IYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
++ G + P+ S+ S+C GR +H I +G DV +L MY+KCG
Sbjct: 257 LHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGL 316
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ AR +F + V+W A+I+G+A GD EA+ F M G +PD +TV S++
Sbjct: 317 LSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCA 376
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVS 427
C L G Y GL +V VCN L+ MY+KC + DA F + +VS
Sbjct: 377 CTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVS 436
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W ++ C + + E L M RP+ +T VL A +E G
Sbjct: 437 WNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYAL 496
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K +N +++ + + DL + G LK A S+ I D W +L+
Sbjct: 497 KT-GLNCDISVTNGLIDLYAKCGSLKTARKIFDSV-INPDVVSWSSLI 542
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 194/418 (46%), Gaps = 10/418 (2%)
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q F E + + + G T L A + + L + +H + D++
Sbjct: 40 QKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLT 99
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N ++ Y KC LK A+ VF + E R VVSW S+I G + + ++L FY M+
Sbjct: 100 LQNHILNMYGKCGSLKDAQKVFDAMPE--RNVVSWTSVIAGYSQNGQGGNALEFYFQMLQ 157
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G PD T S++ +C + GR +H+H + F + N LISMY+K I
Sbjct: 158 SGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIID 217
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGCG 370
A +F M R +SW +MI+G++Q G EAL F M G +P+ S+ S C
Sbjct: 218 ALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS 277
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
E G+ + GL +V +L DMY+KCG + AR +FY + +V+W
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNA 337
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW---GYFNLMT 487
+IAG A G+ EA+ F QM L P+ +T ++L ACT L +G GY N M
Sbjct: 338 IIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMG 397
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
V P N + + + +L++A+ F + M +D W +L AC H E
Sbjct: 398 LDLDV-PVCN---TLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAE 451
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 316/606 (52%), Gaps = 3/606 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+++Y + + WNS I +AL LF M K + N TF +AC S
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
IH I+KS D++V +V MY + ++ A +F + +D+ +WN+M+ G
Sbjct: 176 IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTG 235
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F Q G + L FY+++ ++ D V+++ + A+ +L K +H++ I G D++
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V NT I YAKC + F + + ++SW + G + +L R +
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAH--KDLISWTTAAAGYAQNKCYLQALELLRQL 353
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G D T + S+L +C L + + +H + I G D + NT+I +Y +CG I
Sbjct: 354 QMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGII 412
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
D A +F+ + + VSWT+MIS Y G ++AL +F +M+ G PD VT++S++S
Sbjct: 413 DYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAV 472
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
L+ GK + G + N L+DMY++CGS+ DA ++F + ++ WT
Sbjct: 473 CSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWT 532
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MI+ ++G A++LF +M + + P+ +TFLA+L AC+H+G + +G + +M
Sbjct: 533 AMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCE 592
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
YQ+ P HY+C+ DLLGR+ L+EA V+SM + +W LL AC+IH N EIGE
Sbjct: 593 YQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEV 652
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A +L EL+ + YV ++N++A GRW V +R MK + + K PG S + + K
Sbjct: 653 AAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIH 712
Query: 610 TFTVED 615
F D
Sbjct: 713 AFLSRD 718
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 238/463 (51%), Gaps = 4/463 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+I WN+ + V EA AL ++R M+ + ++ TFP + KAC + D IH
Sbjct: 22 SIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIH 81
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFL 136
G +K S +FV ++V +YAKC+ ++ A KLFD+M R DV SWN++I ++ G
Sbjct: 82 GLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMC 141
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ LCLF M G+ + T QA + + L +H+ + G DV V N
Sbjct: 142 TEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANAL 201
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++ Y + + A ++F +E + +V+WNS++ G + ++L F+ + +P
Sbjct: 202 VAMYVRFGKMPEAAVIFGNLEG--KDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKP 259
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D +++S++ + L+ G+ +H++ I GFD ++ V NTLI MY+KC + F
Sbjct: 260 DQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAF 319
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M + +SWT +GYAQ +AL L ++ G D + S++ C L
Sbjct: 320 DLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLG 379
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
K Y GGL D V+ N +ID+Y +CG I A +F ++ K VVSWT+MI+
Sbjct: 380 KIKEIHGYTIRGGLSDPVLQ-NTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYV 438
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG +AL++F M E L P+ VT +++L A L+KG
Sbjct: 439 HNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKG 481
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 241/503 (47%), Gaps = 20/503 (3%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY KC + A +FDKM +R + +WNAM+ G+ G L ++ MR +G+ D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
L +A + L +H I G D+ V V N+ ++ YAKCND+ A +F +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 218 EGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+R VVSWNSII + ++L + M+ G + T + L +C +
Sbjct: 121 --VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKL 178
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G +H+ + G LDV V N L++MY + G + A +F + + V+W +M++G+ Q
Sbjct: 179 GMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ 238
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G EAL F+ ++ A PD V+++S+I G+ G L GK YA G N++V
Sbjct: 239 NGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILV 298
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N LIDMY+KC + F + K ++SWTT AG A N +++AL+L Q+ +
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGM 358
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
+ ++L AC L K + +P L + + D+ G G + A+
Sbjct: 359 DVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAV 416
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHR---NIEIGEYVAYRLFELEPHSAAPYVEMANIYA 573
+S+ K D W +++ +C +H N + + + + LEP YV + +I +
Sbjct: 417 RIFESIECK-DVVSWTSMI-SCYVHNGLANKALEVFSSMKETGLEP----DYVTLVSILS 470
Query: 574 LGGRWDGVANLRTMMKRNQVKKF 596
V +L T+ K ++ F
Sbjct: 471 ------AVCSLSTLKKGKEIHGF 487
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 305/571 (53%), Gaps = 37/571 (6%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK--SPFWSDIFVQTTMVDM 98
+ RM+ + E +N+ F I KAC++L + + + +H IVK P D FV T ++DM
Sbjct: 1205 FYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGP---DSFVMTGLIDM 1261
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
Y KC +++C+ +F+++ D++V SW +MI G+ Q E+ L LF MR ++++ T+
Sbjct: 1262 YGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTL 1321
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ A + L K VH + I + + T++ Y KC + A +++ +
Sbjct: 1322 GSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIY----D 1377
Query: 219 GLRTV--VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
L T+ VSW +I G T + +D L + D R D+ +LL
Sbjct: 1378 ELPTIDLVSWTVMIVGYTQARQPNDGLRLF----ADEIRSDLLPNSALLQV--------- 1424
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
F V +N LI MY+KC I A +F G+ ++ ++W +MISGYAQ
Sbjct: 1425 ------------FFQRVRFLNALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQ 1472
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL-KDNVM 395
G +ALRLF M + PD +T++S +S GA+++G Y+ GGL N+
Sbjct: 1473 NGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLY 1532
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ AL++ Y+KCG AR +F ++ K +++W+ MI G + G+ +L +F M++ D
Sbjct: 1533 IGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKED 1592
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
L+PN V F VL AC+++G +E+G YF M + Y P + HY+CM DLL R GKL EA
Sbjct: 1593 LKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQDYNFVPSMKHYACMVDLLARSGKLDEA 1652
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
LDF++ MP++ D ++G L C ++ ++GE V + +L + A YV ++N+YA
Sbjct: 1653 LDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYASD 1712
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
G+W V +R +M + + K PG SLV N
Sbjct: 1713 GKWGQVNEVRDLMLQRGLNKVPGYSLVETNA 1743
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 202/436 (46%), Gaps = 30/436 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I V N A + L+LF RM+ +E N T I A KL + +HG+ +
Sbjct: 1286 WTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTKLRALHQGKWVHGYAI 1345
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F+ TT +DMY KC + A ++D++P D+ SW MIVG+ Q L
Sbjct: 1346 KNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLR 1405
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF + I++D + L Q V N I YA
Sbjct: 1406 LFAD----EIRSDLLPNSALLQVFFQR---------------------VRFLNALIDMYA 1440
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC+ + A +F G+ E + V++WNS+I G D+L + M PD T+
Sbjct: 1441 KCHTISDAYAIFHGVLE--KDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITL 1498
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VS LS+ A+ G +H++ + G F ++ + L++ Y+KCGD SAR +FD M
Sbjct: 1499 VSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMG 1558
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL-GK 379
+ ++W+AMI GY +GD +L +F M P+ V +++S C SG +E G+
Sbjct: 1559 VKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGMVEEGGR 1618
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+F + ++ ++D+ ++ G + +A + +P ++ V + + GC L
Sbjct: 1619 YFKSMIQDYNFVPSMKHYACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHGCGLY 1678
Query: 439 GEFVEALDLFHQMMEL 454
F + +M++L
Sbjct: 1679 SRFDLGEVVVREMLQL 1694
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL N++ L+ +Y G + AR +F +P +W MI LN FV+ + F
Sbjct: 1147 GLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIP-F 1205
Query: 449 HQMMELDLRP-NRVTFLAVLQACTH 472
+ M + R + + F +L+AC+
Sbjct: 1206 YNRMRMSFRECDNIIFSIILKACSE 1230
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/625 (32%), Positives = 316/625 (50%), Gaps = 42/625 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I V ++ +A +F +M + P+ F + A L D + +
Sbjct: 329 WMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAI 388
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ + D+ V + +++ Y + LD A F+ MP+R+ SW MI FAQ G L+ +
Sbjct: 389 KTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQ 448
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ + + + Q K + + ++ +V N I+ Y
Sbjct: 449 LYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEI--------LNPNVVAWNAIIAGYT 500
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ LK A+ +F+ + ++ SW ++I G ++ ++L + G P ++
Sbjct: 501 QNGMLKEAKDLFQKMP--VKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI------------ 309
S LS+C + GR++HS I G + V+N LISMY+KCG++
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618
Query: 310 -------------------DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D AR +F+ M R VSWTA+IS Y Q G + AL LF M
Sbjct: 619 KDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDM 678
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
A G P+ +TV S++S CG GA++LG+ F G + V N+LI MY KCG
Sbjct: 679 LARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-Y 737
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
D +F +PE +++W ++ GCA NG EA+ +F QM + P++++FL VL AC
Sbjct: 738 EDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCAC 797
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+HAG +++GW +FN MT+ Y + P + HY+CM DLLGR G L EA +++MP+K D+ I
Sbjct: 798 SHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVI 857
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
W LL AC+IHRN+E+G+ VA RLF++ +A YV ++N++A G WD VA +R +MK
Sbjct: 858 WEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKD 917
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
+ K PG S + + K F D
Sbjct: 918 QGLTKEPGISWIQVKNKLHCFVTGD 942
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 146/588 (24%), Positives = 252/588 (42%), Gaps = 89/588 (15%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
I W + + +A +F M ++N + N + ++ K + L+ +M
Sbjct: 232 NIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMP 291
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
++ W+ + V Y C R+ A +LFD+MP+R+ SW MI G+ +
Sbjct: 292 EKNVAS---WNSV------VTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDY 342
Query: 137 EKVLCLFYNM-RLVGI--QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ +F M R V Q+ FV V+ A L L+ S+ I G + DV V
Sbjct: 343 WEAWDVFVKMCRTVARPDQSIFVVVLS---AITGLDDLELIGSLRPIAIKTGYEGDVVVG 399
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ ++AY + L +A F + E R SW ++I + DD++ Y +
Sbjct: 400 SAILNAYTRNGSLDLAMHFFETMPE--RNEYSWTTMIAAFAQCGRLDDAIQLYERVP--- 454
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
V T +++++ + + RL+ + + +V N +I+ Y++ G + A+
Sbjct: 455 -EQTVATKTAMMTAYAQVGRIQKARLIFDEIL----NPNVVAWNAIIAGYTQNGMLKEAK 509
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LF M + SW AMI+G+ Q + EAL L + +G VP + S +S C G
Sbjct: 510 DLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIG 569
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI----------------------- 410
+E+G+ + A G + N V N LI MY+KCG++
Sbjct: 570 DVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLIS 629
Query: 411 --------GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
DAR +F +P++ VVSWT +I+ G ALDLF M+ ++PN++T
Sbjct: 630 GLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLT 689
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTK---------------------------VYQVNPE 495
++L AC + G ++ G + L+ K V++ PE
Sbjct: 690 VTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYEDGFCVFEEMPE 749
Query: 496 LNHYSCMADLLG--RKGKLKEALDFVQSMPIKS---DAGIWGTLLCAC 538
+ + A L+G + G KEA+ + M ++ D + +LCAC
Sbjct: 750 HDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCAC 797
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 236/531 (44%), Gaps = 71/531 (13%)
Query: 11 NKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKACAKLSD 69
NK + + Q N++I+E +A +F M + D+ N++ + +
Sbjct: 163 NKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEAR 222
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
L+ + +I T ++ YAK R++ A ++F+ M +R+V SWNAMI G
Sbjct: 223 LLFDAFVG---------KNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISG 273
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ Q G L+ LF M + +
Sbjct: 274 YVQNGDLKNARKLFDEMP---------------------------------------EKN 294
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V+ N+ ++ Y C + A +F + E R VSW +I G + + ++ + + M
Sbjct: 295 VASWNSVVTGYCHCYRMSEARELFDQMPE--RNSVSWMVMISGYVHISDYWEAWDVFVKM 352
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
RPD + V +LS+ + L + I G++ DV V + +++ Y++ G +
Sbjct: 353 CRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSL 412
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD--LVTVLSMIS 367
D A F+ M +R SWT MI+ +AQ G LD+A++L+ VP+ + T +M++
Sbjct: 413 DLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLY------ERVPEQTVATKTAMMT 466
Query: 368 GCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
Q G ++ + FD L NV+ NA+I Y++ G + +A++LF +P K
Sbjct: 467 AYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSA 521
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW MIAG N E EAL+L ++ P+ +F + L AC + G +E G +L
Sbjct: 522 SWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLA 581
Query: 487 TKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K + N Y + + + + G +++ +++ +K D W +L+
Sbjct: 582 IK---TGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK-DTVSWNSLI 628
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 145/311 (46%), Gaps = 42/311 (13%)
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA------- 349
NT I + G ++ AR +F+ M R VSW +MI+GY+Q G +DEA LF A
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 350 --------------MEAAGEV------PDLVTVLSMISGCGQSGALELG-KWFDNYACSG 388
+E A EV ++V+ +MISG Q+G L+ K FD
Sbjct: 235 TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMP--- 291
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
+ NV N+++ Y C + +ARELF +PE+ VSW MI+G ++ EA D+F
Sbjct: 292 --EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVF 349
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLG 507
+M RP++ F+ VL A T LE + K Y+ + + S + +
Sbjct: 350 VKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVG--SAILNAYT 407
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-HSAAPYV 566
R G L A+ F ++MP +++ W T++ A ++ A +L+E P + A
Sbjct: 408 RNGSLDLAMHFFETMPERNEYS-WTTMIAAFAQCGRLDD----AIQLYERVPEQTVATKT 462
Query: 567 EMANIYALGGR 577
M YA GR
Sbjct: 463 AMMTAYAQVGR 473
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
CN I + G + +AR +F + ++ VVSW +MI G + NG+ EA LF + ++
Sbjct: 174 CNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI 233
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
R T+ +L G +E+ F MT+ V+ ++ M + G LK A
Sbjct: 234 R----TWTILLTGYAKEGRIEEAREVFESMTERNVVS-----WNAMISGYVQNGDLKNAR 284
Query: 517 DFVQSMPIKSDAGIWGTLLCA-CKIHRNIEIGEYVAYRLFELEPH 560
MP K+ A W +++ C +R E A LF+ P
Sbjct: 285 KLFDEMPEKNVAS-WNSVVTGYCHCYRMSE-----ARELFDQMPE 323
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/628 (32%), Positives = 320/628 (50%), Gaps = 39/628 (6%)
Query: 20 NQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
N +++QI++ + + ++ + + P I A A + +Y++ +
Sbjct: 4 NYYSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDG 63
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
I + ++F ++ Y+K L + F+K+PDRD +WN +I G++ G +
Sbjct: 64 IPQP----NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 119
Query: 140 LCLFYNMRLVGIQADF--VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ YN + ++ VT+M + + + H+SL K +H I +G ++ + V + +
Sbjct: 120 VKA-YNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL 178
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD----- 252
Y+K + A+ VF G+++ R V +N+++GG +D+L +R M D
Sbjct: 179 DMYSKVGCISDAKKVFYGLDD--RNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWS 236
Query: 253 -------------------------GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
G + D S+L +C A+ GR +H+ I
Sbjct: 237 AMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRT 296
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
+ V + LI MY KC + A+ +FD M + VSWTAM+ GY Q G EA+++F
Sbjct: 297 NLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIF 356
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M+ +G PD T+ IS C +LE G F A + GL + V N+L+ +Y KC
Sbjct: 357 LDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKC 416
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G I D+ LF + + VSWT M++ A G VEA+ LF +M++L L+P+ VT V+
Sbjct: 417 GDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVI 476
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC+ AG +EKG YF LM Y + P HYSCM DL R G+++EA+ F+ MP + D
Sbjct: 477 SACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPD 536
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTM 587
A W TLL AC+ N+EIG++ A L EL+PH A Y +++IYA G+WD VA LR
Sbjct: 537 AIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRG 596
Query: 588 MKRNQVKKFPGQSLVHINGKTCTFTVED 615
MK V+K PGQS + GK +F+ +D
Sbjct: 597 MKEKNVRKEPGQSWIKWKGKLHSFSADD 624
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + W + + A +A+ +F M+++ I+P++ T ACA +S
Sbjct: 329 KQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGS 388
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
HG + + I V ++V +Y KC +D + +LF++M RD SW AM+ +AQ G
Sbjct: 389 QFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFG 448
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + LF M +G++ D VT+ G+ A A
Sbjct: 449 RAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRA 482
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/591 (33%), Positives = 311/591 (52%), Gaps = 66/591 (11%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
F T++ YAK + + +L +MPD D SW A+IVG+ Q G + + +F M
Sbjct: 77 FSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISE 136
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
+ TV + + + L + + +HSF + +G+ + V V + ++ YAKC D +A
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIA 196
Query: 210 ELVFRGI----------------EEGL-------------RTVVSWNSIIGGCTYGDKFD 240
++VF + + G R +VSWNS+I G +
Sbjct: 197 KVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNL 256
Query: 241 DSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
++L + M+ + +PD T+ S+LS+C E L G+ +H++ + + +V N L
Sbjct: 257 EALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316
Query: 300 ISMYSKCGDIDSARFL---------------------------------FDGMCDRTRVS 326
ISMY+K G ++ AR + F+ + DR V+
Sbjct: 317 ISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA 376
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
WTAMI GY Q G ++AL LF M G P+ T+ +M+S LE GK A
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALNGEFVEA 444
G V NALI MY+K G+I A+ +F LP +K +VSWT+MI A +G EA
Sbjct: 437 KAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEA 495
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
++LF +M+ + ++P+ +T++ VL ACTH G +E+G Y+N+MT+V+++ P L+HY+CM D
Sbjct: 496 INLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMID 555
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
L GR G L+EA F++SMPI+ D WG+LL +CKIH+N ++ + A RL ++P ++
Sbjct: 556 LYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGA 615
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y+ +AN+Y+ G+W+ A R +MK V+K G S +HI + F VED
Sbjct: 616 YLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVED 666
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 219/467 (46%), Gaps = 66/467 (14%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
A+ +F +M + P+ T + +CA + IH +VK S + V T++++
Sbjct: 126 AIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLN 185
Query: 98 MYAKC----------DRL---------------------DCAYKLFDKMPDRDVASWNAM 126
MYAKC DR+ + A F+KMPDRD+ SWN+M
Sbjct: 186 MYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSM 245
Query: 127 IVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
I G++Q G+ + L +F M ++ D T+ + A + + L++ K +H++ +
Sbjct: 246 ISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAE 305
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELV-------------FRGIEEGL------------ 220
+ +V N IS YAK +++A L+ F + +G
Sbjct: 306 TETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365
Query: 221 ------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
R VV+W ++I G ++D+L +R M+ +G P+ T+ ++LS L
Sbjct: 366 FNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTIL 425
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR-VSWTAMISG 333
G+ +H+ I G SV N LI+MY+K G+I+ A+ +FD + VSWT+MI
Sbjct: 426 EHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMA 485
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKD 392
AQ G EA+ LF M + G PD +T + ++S C G +E G K+++ ++
Sbjct: 486 LAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEP 545
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+ +ID+Y + G + +A ++P E ++W +++A C ++
Sbjct: 546 TLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 169/391 (43%), Gaps = 39/391 (9%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS I + +AL +F +M + ++P+N T I ACA L + IH
Sbjct: 239 IVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIH 298
Query: 78 GHIVKSPFWS---------------------------------DIFVQTTMVDMYAKCDR 104
+I+++ + +I T+++D Y K
Sbjct: 299 AYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGN 358
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
+ A ++F+K+ DRDV +W AMIVG+ Q G L LF M G + + T+ +
Sbjct: 359 VKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSV 418
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ L K +H+ I G + SV N I+ YAK ++ +A+ VF + G + +V
Sbjct: 419 SSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIV 477
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SW S+I +++N + M+ G +PD T V +LS+C + QGR ++
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537
Query: 285 IH-YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISG--YAQKGDL 340
+ + +S +I +Y + G + A + M + ++W ++++ + DL
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADL 597
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ + G + + ++ S CG+
Sbjct: 598 AKVAAERLLLIDPGNSGAYLALANVYSACGK 628
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 63/266 (23%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR VH I G L V ++N L++ Y+K G + A +FD M ++ SW +ISGYA+
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 337 KGDLDEALRLFFAMEAAGEV-------------------------------PDLVTVLSM 365
+G+ + + RL + M V P TV ++
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR----------- 414
+S C + L++G+ ++ GL V V +L++MY+KCG A+
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208
Query: 415 ----------------EL----FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-E 453
EL F +P++ +VSW +MI+G + G +EAL +F +M+ E
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNE 268
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKG 479
L+P+ T ++L AC + L G
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIG 294
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 7 PPR--LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
P R NK+ R + W + I V + AL LFR M EPN+ T +
Sbjct: 361 PAREIFNKL-RDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVS 419
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVAS 122
+ L+ + + IH +K+ S V ++ MYAK ++ A ++FD +P+ +++ S
Sbjct: 420 SSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVS 478
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLK 175
W +MI+ AQ G ++ + LF M VG++ D +T +G+ A H K+ +++
Sbjct: 479 WTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMT 538
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
VH ++ +S I Y + L+ A L + ++W S++ C
Sbjct: 539 EVHE------IEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDN-IAWGSLLASC 589
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 305/596 (51%), Gaps = 3/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I ++ + + R M+ E + TF + K A F Q +H I+
Sbjct: 67 WNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + +++ + ++DMYAKC++L+ AY F + + SWNAMI G+AQ G E
Sbjct: 127 KMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFW 186
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G + D T L A +L +H I G++ ++CN I++Y+
Sbjct: 187 LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYS 246
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A+ +F G+R +V+WNS++ + D + M GF PD+ +
Sbjct: 247 KCGSLDDAKRIFDS-SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSY 305
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARFLFDGM 319
S++S+C GR +H I GF+ V + N LISMY K G + A +F+ +
Sbjct: 306 TSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESL 365
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ RVSW ++++G +Q G ++A++ F M +A D + +++ C +LG+
Sbjct: 366 EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQ 425
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
A GL+ N V ++LI MYSKCG I DAR F + + ++W ++ G A +G
Sbjct: 426 QIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHG 485
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ ALDLF M E ++ + +TF+AVL AC+H G +E+G + M Y V P + HY
Sbjct: 486 QCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHY 545
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C DL GR G+L+EA ++ MP K D +W T L AC+ NIE+ VA L E+EP
Sbjct: 546 ACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEP 605
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N+Y RWD A ++ +MK VKK PG S + +N F +D
Sbjct: 606 EEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQD 661
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 186/406 (45%), Gaps = 5/406 (1%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H VK +D++ +++ Y KC L A LFD+MP RD SWN MI G G L
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E + MR G + D T + + A L + VHS I +G +V +
Sbjct: 81 EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC L+ A L F I + VSWN++I G + + M +G +
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISK--HNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T LL + +H I +G +L ++ N LI+ YSKCG +D A+ +F
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 317 DGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
D R V+W ++++ Y + D A +L M+ G PDL + S+IS C
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKC--GSIGDARELFYALPEKTVVSWTTMIA 433
G+ G + +V + NALI MY K GS+ +A +F +L K VSW +++
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
G + G +A+ F M + + +F AVL++C+ + G
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLG 424
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 166/361 (45%), Gaps = 7/361 (1%)
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
HS + +G ADV CN ++ Y KC +L+ A+++F E +R VSWN++I G
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFD--EMPMRDSVSWNTMIAGHINCG 78
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+ S + R M GF D T S+L G+ VHS I G+ +V +
Sbjct: 79 NLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MY+KC ++ A F + VSW AMI+GYAQ GD + A L ME GE
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T ++ + L GL+ +CNALI YSKCGS+ DA+ +F
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 418 YALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
+ + +V+W +++A L + A L M E P+ ++ +++ AC +
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318
Query: 477 EKGWGYFNLMTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
G L+ K Q P N M L G +KEAL +S+ K D W ++
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMY-LKSDYGSMKEALCIFESLEFK-DRVSWNSI 376
Query: 535 L 535
L
Sbjct: 377 L 377
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 130/295 (44%), Gaps = 10/295 (3%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL L HS + G DV N +++ Y KC ++ SA LFD M R VSW MI+
Sbjct: 13 ALANLLLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIA 72
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G+ G+L+ + + M + G D T SM+ G +G LG+ + G +
Sbjct: 73 GHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAE 132
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
NV +AL+DMY+KC + DA F ++ + VSW MI G A G+ A L M
Sbjct: 133 NVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCME 192
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL--GRKG 510
+ + + T+ +L A F L K+ + EL + C A + + G
Sbjct: 193 QEGEKVDDGTYAPLLPLLDDADFCNLT---SQLHGKIIKHGLELVNTMCNALITSYSKCG 249
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF-ELEPHSAAP 564
L +A S D W +LL A + E +A++L +++ H P
Sbjct: 250 SLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQ----EDLAFKLLIDMQEHGFEP 300
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 297/586 (50%), Gaps = 33/586 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I+ VDK AL +F M P+ TFP + KAC+ +S +IHG
Sbjct: 151 WNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRA 210
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ S F S++FVQ +++ MY C ++ A ++F+ M R V SWN MI G+ Q G E+ L
Sbjct: 211 LVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEAL 270
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M ++ D T++ + + K L L VH + + V N + Y
Sbjct: 271 AVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMY 330
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++C + A LVF +E + V++W S+I G +L M DG P+ T
Sbjct: 331 SRCGGIDEASLVFAETKE--KDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ SLLS+C +L MY+KC + + +F
Sbjct: 389 LASLLSACA----------------------------SLCYMYAKCNAVSYSFQVFAKTS 420
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ V W A++SG EA+ LF +M + T S+I L+
Sbjct: 421 KKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMN 480
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALN 438
+Y G + V LIDMYSKCGS+ A ++F +P EK ++ W+ +IAG ++
Sbjct: 481 LHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 540
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G A+ LF+QM+ ++PN +TF +VL AC+H G ++ G F M + Y +P NH
Sbjct: 541 GHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNH 600
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ DLLGR G+L EA D ++SMP + + IWG LL AC IH+N+E+GE A RLFELE
Sbjct: 601 YTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELE 660
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
P S Y+ +ANIYA GRW N+R +M + ++K P QS V +
Sbjct: 661 PESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSVGV 706
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 222/494 (44%), Gaps = 40/494 (8%)
Query: 73 SQMIHGHIVKSPFWSD---IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
++++HGH + S I + + + YA C + A KLFD + D + WNA+I
Sbjct: 98 TKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKM 157
Query: 130 FAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ GF L +F +M G D T + +A L++ +H + G +
Sbjct: 158 YVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSS 217
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
++ V N+ ++ Y C + +A VF + + R+VVSWN++I G + +++L +
Sbjct: 218 NMFVQNSLLAMYMNCGKVGLARQVFNVMLK--RSVVSWNTMISGWFQNGRPEEALAVFNS 275
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ PD T+VS L SC + L G VH + V N L+ MYS+CG
Sbjct: 276 MMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGG 335
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
ID A +F ++ ++WT+MI+GY G+ AL L AM+ G VP+ VT+ S++S
Sbjct: 336 IDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSA 395
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C +L MY+KC ++ + ++F +K V W
Sbjct: 396 CA----------------------------SLCYMYAKCNAVSYSFQVFAKTSKKRTVPW 427
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+++G N EA+ LF M+ ++ N TF +V+ A L++ + + +
Sbjct: 428 NALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVR 487
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS-DAGIWGTLLCACKIHRNIEIG 547
++ ++ + + D+ + G L A +P K D +W L+ +H + E
Sbjct: 488 SGFIS-KIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE-- 544
Query: 548 EYVAYRLFELEPHS 561
A LF HS
Sbjct: 545 --TAVLLFNQMVHS 556
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 200/445 (44%), Gaps = 53/445 (11%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ I +AL +F M +EP++ T +C L + +H
Sbjct: 249 SVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVH 308
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ K+ I V+ +VDMY++C +D A +F + ++DV +W +MI G+ G +
Sbjct: 309 KLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAK 368
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L L M+L G+ + VT+ L +S C +
Sbjct: 369 SALALCPAMQLDGVVPNAVTLASL----------------------------LSACASLC 400
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKCN + + VF + + V WN+++ G + + +++ ++ M+ + +
Sbjct: 401 YMYAKCNAVSYSFQVFAKTSK--KRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 458
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T S++ + L Q +HS+ + GF ++VI LI MYSKCG +D A +FD
Sbjct: 459 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 518
Query: 318 GMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG-- 373
+ ++ + + W+ +I+GY G + A+ LF M +G P+ +T S++ C G
Sbjct: 519 EIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLV 578
Query: 374 --ALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWT 429
L L K+ +NY S N C ++D+ + G + +A +L ++P ++ W
Sbjct: 579 DDGLTLFKYMIENYPSSP--LPNHYTC--VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWG 634
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL 454
++ C L HQ +EL
Sbjct: 635 ALLGAC-----------LIHQNVEL 648
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 167/352 (47%), Gaps = 21/352 (5%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC-TYGDKFDDS-----LNFYR 247
N ++ A +MA G E+ +V+ + I G C + + +S L+ +
Sbjct: 18 NAMVAVVALIKKTEMAN----GSEQRHHSVLLLDKIYGDCGDFRNNLSNSNTTKALSKSK 73
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT---LISMYS 304
+I + R D SLL +L + +++H H I G + I+ L Y+
Sbjct: 74 SLIANVHRCD-----SLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYA 128
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVL 363
CG + AR LFD + D + W A+I Y KG +ALR+F +M +G+ PD T
Sbjct: 129 FCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFP 188
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+I C L +G A G N+ V N+L+ MY CG +G AR++F + ++
Sbjct: 189 LVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKR 248
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
+VVSW TMI+G NG EAL +F+ MM+ + P+ T ++ L +C + LE G
Sbjct: 249 SVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVH 308
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L+ K + + ++ + + D+ R G + EA V + + D W +++
Sbjct: 309 KLVQKNH-LQEKIEVRNALVDMYSRCGGIDEA-SLVFAETKEKDVITWTSMI 358
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 318/598 (53%), Gaps = 5/598 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + A LF MK++ + + +F + K A + F + +HG ++
Sbjct: 69 WNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + +++V +++VDMYAKC+R++ A++ F ++ + + SWNA+I GF Q+ ++
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188
Query: 142 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M + + D T L +LLK VH+ + +G+ ++++CN IS+Y
Sbjct: 189 LLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSY 248
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A C + A+ VF G+ G + ++SWNS+I G + + + + + M D+ T
Sbjct: 249 ADCGSVSDAKRVFDGLG-GSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK--CGDIDSARFLFDG 318
LLS+C E + G+ +H I G + S N LISMY + G ++ A LF+
Sbjct: 308 YTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES 367
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + +SW ++I+G+AQKG ++A++ F + ++ D +++ C L+LG
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCAL 437
+ A G N V ++LI MYSKCG I AR+ F + K + V+W MI G A
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G +LDLF QM +++ + VTF A+L AC+H G +++G NLM VY++ P +
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRME 547
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+ DLLGR G + +A + ++SMP+ D + T L C+ IE+ VA L E+
Sbjct: 548 HYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEI 607
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP YV ++++Y+ +W+ A+++ MMK VKK PG S + I + F ED
Sbjct: 608 EPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAED 665
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 211/471 (44%), Gaps = 7/471 (1%)
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ H + +K SDI+V ++D Y K L A LFD+MP RD SWN MI G+ G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
LE CLF M+ G D + L + K L + VH I G + +V V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYDG 253
+ + YAKC ++ A F+ I E VSWN++I G + M +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISE--PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D T LL+ P + VH+ + G ++++ N +IS Y+ CG + A+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 314 FLFDGM-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+FDG+ + +SW +MI+G+++ + A LF M+ D+ T ++S C
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSK--CGSIGDARELFYALPEKTVVSWTT 430
GK GL+ NALI MY + G++ DA LF +L K ++SW +
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I G A G +A+ F + +++ + F A+L++C+ L+ G L TK
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
V+ E S + + + G ++ A Q + K W ++ H
Sbjct: 439 FVSNEFV-ISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 3/255 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + WNS I A LF +M+++ +E + T+ + AC+ ++ +
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAK--CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+HG ++K ++ MY + ++ A LF+ + +D+ SWN++I GFAQ
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G E + F +R I+ D L ++ L L + +H+ G ++ V
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ I Y+KC ++ A F+ I + V+WN++I G SL+ + M
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSK-HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQN 505
Query: 254 FRPDVTTVVSLLSSC 268
+ D T ++L++C
Sbjct: 506 VKLDHVTFTAILTAC 520
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S + WNS I K + A+ F ++ ++I+ ++ F + ++C+ L+ Q
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQM 133
IH KS F S+ FV ++++ MY+KC ++ A K F ++ + +WNAMI+G+AQ
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
G + L LF M ++ D VT + A H
Sbjct: 489 GLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSH 522
>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 298/582 (51%), Gaps = 9/582 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I A LF M + P+ T + C + + +HG
Sbjct: 9 WNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGIAA 68
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS D V+ ++ Y+KC LD A LF +M D+ SWN MI ++Q G +E+ +
Sbjct: 69 KSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSGLMEEAIT 128
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F NM ++ VT++ L A H H + +H + G+ D+SV + + AY+
Sbjct: 129 VFKNMFEKSVEISPVTIINLLSA--HVSH----EPLHCLVVKSGMVNDISVVTSLVCAYS 182
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L AE ++ + ++V SI+ D ++ ++ M + D +
Sbjct: 183 RCGYLDSAERLYASANQ--DSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMKIDAVAL 240
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V +L C + G +H + I G V+N LI+MYSK D+++ FLF + +
Sbjct: 241 VGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFLFQQLQE 300
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKW 380
+SW ++ISG Q G A +F M+ + G +PD +T+ S+++GC Q L LGK
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGKE 360
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y ++ VC ALIDMY+KCG+ A +F ++ +W +MI+G +L+G
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL + +M E L+P+++TFL VL ACTH GF+++G YF M K + ++P L HY+
Sbjct: 421 QNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEFGISPCLQHYA 480
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
M LLGR EAL + M IK D+ +WG LL AC IHR +E+GEY+A ++F L+
Sbjct: 481 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYIAKKMFMLDYK 540
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ YV M+N+YA WD V +R MMK N + G S +
Sbjct: 541 NGGLYVLMSNLYATEAMWDDVVRVRKMMKDNGYDGYLGVSQI 582
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 240/506 (47%), Gaps = 21/506 (4%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
MP+RD WNA+I G+++ G+ LF M G T++ L +S
Sbjct: 1 MPERDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+SVH G++ D V N IS Y+KC +L AE++FR +++ ++ VSWN++IG +
Sbjct: 61 RSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKD--KSTVSWNTMIGAYS 118
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
++++ +++M T+++LLS+ V E L H + G D+S
Sbjct: 119 QSGLMEEAITVFKNMFEKSVEISPVTIINLLSAHVSHEPL------HCLVVKSGMVNDIS 172
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V+ +L+ YS+CG +DSA L+ + V T+++S YA+KGD+D A+ F M
Sbjct: 173 VVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLC 232
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D V ++ ++ GC S +++G YA GL +V N LI MYSK +
Sbjct: 233 MKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVL 292
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHA 473
LF L E ++SW ++I+GC +G A ++FHQM + L P+ +T ++L C+
Sbjct: 293 FLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQL 352
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIW 531
L G L + N E ++ C A D+ + G +A +S+ A W
Sbjct: 353 CCLNLGK---ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TW 408
Query: 532 GTLLCACKIH--RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD-GVANLRTMM 588
+++ + +N + Y+ R L+P ++ + + GG D G R M+
Sbjct: 409 NSMISGYSLSGLQNRALSCYLEMREKGLKPDKIT-FLGVLSACTHGGFVDEGKIYFRAMI 467
Query: 589 KRNQVKKFPGQS--LVHINGKTCTFT 612
K + +V + G+ C FT
Sbjct: 468 KEFGISPCLQHYALMVGLLGRACLFT 493
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/602 (32%), Positives = 310/602 (51%), Gaps = 17/602 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + AL LF+RM+ + P +T CAK+ ++ IH +
Sbjct: 196 WNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVR 252
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + V T + YA+ LD A ++FD+ +RDV SWNAM+ +AQ G + +
Sbjct: 253 ESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAAL 312
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI VT L A+ L + +H+ + G+D D+ + N + Y
Sbjct: 313 LFARMLHEGIPPSKVT---LVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYT 369
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C + A +F GI VSWN++I G + + +L ++ M +G P T
Sbjct: 370 RCGSPEEARHLFEGIPG---NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATY 426
Query: 262 VSLLSSCVC-PE---ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID--SARFL 315
++LL + PE A+ +GR +HS + G+ + ++ ++ MY+ CG ID +A F
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486
Query: 316 FDGMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
M DR V SW A+IS +Q G AL F M+ G P+ +T ++++ C + A
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAA 546
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
L G ++ G++ NV V AL MY +CGS+ ARE+F + E+ VV + MIA
Sbjct: 547 LTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIA 606
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
+ NG EAL LF +M + RP+ +F++VL AC+H G ++GW F M + Y +
Sbjct: 607 AYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIA 666
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P +HY+C D+LGR G L +A + ++ M +K +W TLL AC+ +R+++ G
Sbjct: 667 PSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSM 726
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+ EL+P + YV ++NI A G+WD A +RT M+ ++K G+S + I + F
Sbjct: 727 VRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVA 786
Query: 614 ED 615
D
Sbjct: 787 GD 788
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 266/525 (50%), Gaps = 22/525 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + +A +A+ +F RM++ + + +TF + KACA+L D + IH IV
Sbjct: 96 WTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIV 155
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + ++ +Y C + A LF++M +RD+ SWNA I AQ G L+ L
Sbjct: 156 ESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALE 214
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+L G++ +T+ + ++ AK + +++HS G++ + V SAYA
Sbjct: 215 LFQRMQLEGVRPARITL--VITLSVCAK-IRQARAIHSIVRESGLEQTLVVSTALASAYA 271
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ L A+ VF E R VVSWN+++G ++ + M+++G P T+
Sbjct: 272 RLGHLDQAKEVFDRAAE--RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL 329
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V+ + C +L GR++H+ + G D D+ + N L+ MY++CG + AR LF+G+
Sbjct: 330 VNASTGC---SSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG 386
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG----QSGALEL 377
VSW MI+G +QKG + AL LF M+ G P T L+++ ++ A+
Sbjct: 387 NA-VSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY--ALPEK-TVVSWTTMIAG 434
G+ + S G + A++ MY+ CG+I +A F A+ ++ VVSW +I+
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
+ +G AL F +M + PN++T +AVL AC A L +G + +
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG---VIVHDHLRHSGM 562
Query: 495 ELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
E N + + +A + GR G L+ A + + + ++ D I+ ++ A
Sbjct: 563 ESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 208/403 (51%), Gaps = 14/403 (3%)
Query: 69 DFLYSQ--MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
D L SQ IH IV ++ ++ +Y KC+ L ++F ++ RD ASW +
Sbjct: 42 DRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTI 99
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I + + G ++ + +F+ M+ G++ D VT + + +A LS +S+H++ + G+
Sbjct: 100 ITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGL 159
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
+ + N + Y C + A L+F +E R +VSWN+ I D +L +
Sbjct: 160 EGKSVLANLLLHIYGSCGCVASAMLLFERME---RDLVSWNAAIAANAQSGDLDMALELF 216
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
+ M +G RP T+V LS C + Q R +HS G + + V L S Y++
Sbjct: 217 QRMQLEGVRPARITLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALASAYARL 273
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G +D A+ +FD +R VSW AM+ YAQ G + EA LF M G P VT+++
Sbjct: 274 GHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNAS 333
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
+GC +L G+ A GL ++++ NAL+DMY++CGS +AR LF +P V
Sbjct: 334 TGC---SSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAV 389
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
SW TMIAG + G+ AL+LF +M + P R T+L +L+A
Sbjct: 390 SWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
RP +V LL + L QGR +H+ + G + ++ N L+ +Y KC +
Sbjct: 28 RP--AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEE 83
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F + R SWT +I+ Y + G A+ +F M+ G D VT L+++ C + G
Sbjct: 84 VFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGD 143
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L G+ + GL+ ++ N L+ +Y CG + A LF + E+ +VSW IA
Sbjct: 144 LSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAA 202
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A +G+ AL+LF +M +RP R+T + L C
Sbjct: 203 NAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCA 239
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++ ++ G L G+ S GL++ + N L+ +Y KC S+GD E+F L
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ SWTT+I +G+ A+ +FH+M + +R + VTFLAVL+AC G L +G
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 482 YFNLMTKVYQVNPELNHYSCMADLL 506
+ V L S +A+LL
Sbjct: 150 IH-----AWIVESGLEGKSVLANLL 169
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 196/591 (33%), Positives = 311/591 (52%), Gaps = 66/591 (11%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
F T++ YAK + + +L +MPD D SW A+IVG+ Q G + + +F M
Sbjct: 77 FSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISE 136
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
+ TV + + + L + + +HSF + +G+ + V V + ++ YAKC D +A
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIA 196
Query: 210 ELVFRGI----------------EEGL-------------RTVVSWNSIIGGCTYGDKFD 240
++VF + + G R +VSWNS+I G +
Sbjct: 197 KVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNL 256
Query: 241 DSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
++L + M+ + +PD T+ S+LS+C E L G+ +H++ + + +V N L
Sbjct: 257 EALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316
Query: 300 ISMYSKCGDIDSARFL---------------------------------FDGMCDRTRVS 326
ISMY+K G ++ AR + F+ + DR V+
Sbjct: 317 ISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA 376
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
WTAMI GY Q G ++AL LF M G P+ T+ +M+S LE GK A
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALNGEFVEA 444
G V NALI MY+K G+I A+ +F LP +K +VSWT+MI A +G EA
Sbjct: 437 KAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEA 495
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
++LF +M+ + ++P+ +T++ VL ACTH G +E+G Y+N+MT+V+++ P L+HY+CM D
Sbjct: 496 INLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMID 555
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
L GR G L+EA F++SMPI+ D WG+LL +CKIH+N ++ + A RL ++P ++
Sbjct: 556 LYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGA 615
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y+ +AN+Y+ G+W+ A R +MK V+K G S +HI + F VED
Sbjct: 616 YLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVED 666
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 219/467 (46%), Gaps = 66/467 (14%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
A+ +F +M + P+ T + +CA + IH +VK S + V T++++
Sbjct: 126 AIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLN 185
Query: 98 MYAKC----------DRL---------------------DCAYKLFDKMPDRDVASWNAM 126
MYAKC DR+ + A F+KMPDRD+ SWN+M
Sbjct: 186 MYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSM 245
Query: 127 IVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
I G++Q G+ + L +F M ++ D T+ + A + + L++ K +H++ +
Sbjct: 246 ISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAE 305
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELV-------------FRGIEEGL------------ 220
+ +V N IS YAK +++A L+ F + +G
Sbjct: 306 TETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365
Query: 221 ------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
R VV+W ++I G ++D+L +R M+ +G P+ T+ ++LS L
Sbjct: 366 FNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTIL 425
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR-VSWTAMISG 333
G+ +H+ I G SV N LI+MY+K G+I+ A+ +FD + VSWT+MI
Sbjct: 426 EHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMA 485
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKD 392
AQ G EA+ LF M + G PD +T + ++S C G +E G K+++ ++
Sbjct: 486 LAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEP 545
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+ +ID+Y + G + +A ++P E ++W +++A C ++
Sbjct: 546 TLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 169/391 (43%), Gaps = 39/391 (9%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS I + +AL++F +M + ++P+N T I ACA L + IH
Sbjct: 239 IVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIH 298
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDC------------------------------ 107
+I+++ + V ++ MYAK ++
Sbjct: 299 AYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGN 358
Query: 108 ---AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
A ++F+K+ DRDV +W AMIVG+ Q G L LF M G + + T+ +
Sbjct: 359 VKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSV 418
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ L K +H+ I G + SV N I+ YAK ++ +A+ VF + G + +V
Sbjct: 419 SSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIV 477
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SW S+I +++N + M+ G +PD T V +LS+C + QGR ++
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537
Query: 285 IH-YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISG--YAQKGDL 340
+ + +S +I +Y + G + A + M + ++W ++++ + DL
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADL 597
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ + G + + ++ S CG+
Sbjct: 598 AKVAAERLLLIDPGNSGAYLALANVYSACGK 628
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 63/266 (23%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR VH I G L V ++N L++ Y+K G + A +FD M ++ SW +ISGYA+
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 337 KGDLDEALRLFFAMEAAGEV-------------------------------PDLVTVLSM 365
+G+ + + RL + M V P TV ++
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR----------- 414
+S C + L++G+ ++ GL V V +L++MY+KCG A+
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208
Query: 415 ----------------EL----FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-E 453
EL F +P++ +VSW +MI+G + G +EAL +F +M+ E
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNE 268
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKG 479
L+P+ T ++L AC + L G
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIG 294
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 7 PPR--LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
P R NK+ R + W + I V + AL LFR M EPN+ T +
Sbjct: 361 PAREIFNKL-RDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVS 419
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVAS 122
+ L+ + + IH +K+ S V ++ MYAK ++ A ++FD +P+ +++ S
Sbjct: 420 SSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVS 478
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLK 175
W +MI+ AQ G ++ + LF M VG++ D +T +G+ A H K+ +++
Sbjct: 479 WTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMT 538
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
VH ++ +S I Y + L+ A L + ++W S++ C
Sbjct: 539 EVHE------IEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDN-IAWGSLLASC 589
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/525 (35%), Positives = 290/525 (55%), Gaps = 6/525 (1%)
Query: 95 MVDMYAKC--DRLDCAYK--LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+++M +C D D Y LF ++ ++ WN MI G + + + MR G
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ T + +A L L +H+ + G D DV V + + YAKC L+ A
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAH 167
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
VF I + + VVSW +II G KF ++++ +R ++ PD T+V +LS+C
Sbjct: 168 KVFDDIPD--KNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
L G +H + G +V V +L+ MY+KCG+++ AR +FDGM ++ VSW AM
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 285
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
I GYA G EA+ LF M+ PD TV+ ++S C + GALELG+W
Sbjct: 286 IQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEF 345
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
N ++ ALID+Y+KCGS+ A E+F + EK V W +I+G A+NG + LF Q
Sbjct: 346 LYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQ 405
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
+ +L ++P+ TF+ +L CTHAG +++G YFN M + + + P + HY CM DLLGR G
Sbjct: 406 VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAG 465
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMAN 570
L EA +++MP++++A +WG LL AC+IHR+ ++ E +L ELEP ++ YV ++N
Sbjct: 466 LLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSN 525
Query: 571 IYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
IY+ +WD A +R M +++K PG S + ++G F V D
Sbjct: 526 IYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGD 570
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 229/443 (51%), Gaps = 4/443 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ I WN+ IR V + A+ + M+ PNN TFPF+ KACA+L D
Sbjct: 73 KQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGV 132
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH +VK F D+FV+T++V +YAKC L+ A+K+FD +PD++V SW A+I G+ +G
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVG 192
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + +F + + + D T++ + A L+ + +H + +G+ +V V
Sbjct: 193 KFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGT 252
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ + YAKC +++ A VF G+ E + +VSW ++I G ++++ + M +
Sbjct: 253 SLVDMYAKCGNMEKARSVFDGMPE--KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENV 310
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD TVV +LS+C AL G V F + + LI +Y+KCG + A
Sbjct: 311 KPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWE 370
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F GM ++ RV W A+ISG A G + + LF +E G PD T + ++ GC +G
Sbjct: 371 VFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGL 430
Query: 375 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMI 432
++ G ++F++ L ++ ++D+ + G + +A +L +P E + W ++
Sbjct: 431 VDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
Query: 433 AGCALNGEFVEALDLFHQMMELD 455
C ++ + A Q++EL+
Sbjct: 491 GACRIHRDTQLAELALKQLIELE 513
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 310/576 (53%), Gaps = 37/576 (6%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDM--YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH H +K SD Q ++ + ++ A ++FD +P + WN MI G++
Sbjct: 24 KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
++ + + ++ M I+ D T L + L K + + + G D+++
Sbjct: 84 RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V +I ++ C + +A VF + VV+WN ++ G +F S + M
Sbjct: 144 VQKAFIHMFSLCRLVDLARKVFDMGDAW--EVVTWNIMLSGYNRVKQFKKSKMLFIEMEK 201
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDID 310
G P+ T+V +LS+C + L G+ ++ + I+ G + ++ + N LI M++ CG++D
Sbjct: 202 RGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY-INGGIVERNLILENVLIDMFAACGEMD 260
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLD----------------------------- 341
A+ +FD M +R +SWT++++G+A G +D
Sbjct: 261 EAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNR 320
Query: 342 --EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
EAL LF M+ + PD T++S+++ C GALELG+W Y +K++ V NA
Sbjct: 321 FIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNA 380
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY KCG++G A+++F + K +WT MI G A+NG EAL +F M+E + P+
Sbjct: 381 LIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPD 440
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+T++ VL ACTHAG +EKG +F MT + + P + HY CM DLLGR G+L+EA + +
Sbjct: 441 EITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVI 500
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
+MP+K ++ +WG+LL AC++H+N+++ E A ++ ELEP + A YV + NIYA RW+
Sbjct: 501 VNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWE 560
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +R +M +KK PG SL+ +NG F D
Sbjct: 561 NLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGD 596
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 224/471 (47%), Gaps = 35/471 (7%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I+ N + ++ M ++I+P+ TFPF+ K + Y +++
Sbjct: 71 TLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLL 130
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
H VK F S++FVQ + M++ C +D A K+FD +V +WN M+ G+ ++ +
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFK 190
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
K LF M G+ + VT++ + A K L K ++ + V+ ++ + N I
Sbjct: 191 KSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLI 250
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT----------YGD---------- 237
+A C ++ A+ VF ++ R V+SW SI+ G Y D
Sbjct: 251 DMFAACGEMDEAQSVFDNMKN--RDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSW 308
Query: 238 -----------KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
+F ++L +R M +PD T+VS+L++C AL G V ++
Sbjct: 309 TAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 368
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
D V N LI MY KCG++ A+ +F M + + +WTAMI G A G +EAL +
Sbjct: 369 NSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAM 428
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYS 405
F M A PD +T + ++ C +G +E G+ +F + G+K NV ++D+
Sbjct: 429 FSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLG 488
Query: 406 KCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G + +A E+ +P K + W +++ C ++ A Q++EL+
Sbjct: 489 RAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELE 539
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 310/594 (52%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I+ + N+ + R M E N T I +AC L + + + IHG ++
Sbjct: 147 WTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVI 206
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F D+FV T+++ MY++C L A K++ + +DV N MI + + G EK +
Sbjct: 207 KRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIG 266
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F ++ G++ + T + A + +L+ +H I G ++SV N +S Y
Sbjct: 267 VFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYV 326
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L+ AE F G+ E R +VSW +++ G +L + ++ G D
Sbjct: 327 KHGMLEEAEKSFCGMGE--RNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCF 384
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+LL C + L G +H + G+ DVSV LI +Y+KC + SAR +F + D
Sbjct: 385 ATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLD 444
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VS+ A++SGY D ++A+ LF + A PD VT ++S L GK
Sbjct: 445 KNIVSFNAILSGYI-GADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCL 503
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y G + N V NA+I MY+KCGSIGDA +LFY++ +SW +I+ AL+G+
Sbjct: 504 HAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQG 563
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL LF +M + + P+ +T L+VLQAC+++G LE+G+ FN M Y + PE+ H++C
Sbjct: 564 RKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFAC 623
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G L EA+ F+ P +W TL+ CK+H ++ G+ + L +L P
Sbjct: 624 MVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEE 683
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A Y+ ++N+YA GG + A +RT+M +V K G S + I+ K F D
Sbjct: 684 AGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASD 737
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 235/475 (49%), Gaps = 9/475 (1%)
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
D + Q IH + K + +D F +V++Y K ++L A +FD+M R+ +W +I
Sbjct: 93 DLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIK 152
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G Q+ +E V + M VG + + T + QA ++L + +H F I G D
Sbjct: 153 GHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDE 212
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIE-EGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
DV V + IS Y++C DL AE V+ + + +R + S G G+K ++ +
Sbjct: 213 DVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEK---AIGVFL 269
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
H++ G P+ T +++S+C + R++H I G ++SV N ++S+Y K G
Sbjct: 270 HLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHG 329
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++ A F GM +R VSWTA++SGY + G+ +AL F + G D +++
Sbjct: 330 MLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLD 389
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
GC + L LG + G +V V ALID+Y+KC + AR +F++L +K +VS
Sbjct: 390 GCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVS 449
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
+ +++G + + +A+ LF Q+ D++P+ VTF +L L KG +
Sbjct: 450 FNAILSG-YIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYII 508
Query: 488 KV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
K ++ NP + + + + + G + +A SM D+ W ++ A +H
Sbjct: 509 KTGFEANPSVGN--AVITMYAKCGSIGDACQLFYSMNYL-DSISWNAVISAYALH 560
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 175/355 (49%), Gaps = 3/355 (0%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L Q +I + L L +++H+F +G D N ++ Y K N L A+ VF E +
Sbjct: 84 LLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFD--EMLV 141
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R ++W ++I G + + R M + G + T +L +C E LV+G +
Sbjct: 142 RNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQI 201
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H I GFD DV V +LISMYS+CGD+ +A ++ + + MIS Y + G
Sbjct: 202 HGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCG 261
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
++A+ +F + +G P+ T ++IS C +E+ + G D + V NA+
Sbjct: 262 EKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAI 321
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+ +Y K G + +A + F + E+ +VSWT +++G NG +AL+ F Q++EL + +
Sbjct: 322 VSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDS 381
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
F +L C+ L G + K+ V+ +++ + + DL + KL+ A
Sbjct: 382 CCFATLLDGCSECKNLGLGLQIHGFVVKLGYVH-DVSVGTALIDLYAKCRKLRSA 435
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 217/640 (33%), Positives = 321/640 (50%), Gaps = 63/640 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I+ KA + +M+ ++ PN T P I CA+L + IHG +
Sbjct: 98 WNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVS 157
Query: 82 KSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
KS F + V ++ V MYAKC ++ A +FD++ RDV SW A+++G+ EK L
Sbjct: 158 KSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGL 217
Query: 141 CLFYNMRLVGIQADFV---TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
MR +G + V T+ G QA + + + +H + G+ V ++ +
Sbjct: 218 ECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLL 277
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD----- 252
S Y+KC +++ A F + + + V SW S+IG C ++ LN + M D
Sbjct: 278 SMYSKCGNVEEAHNSFCQVVD--KDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPD 335
Query: 253 ---------GFRPDVT--------------------TVVSLLSSCVC-------PEALVQ 276
GF + TV + L S C E L
Sbjct: 336 GIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFD 395
Query: 277 G--------------RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
G VH + I D DVS+ N+LI MY K G++ A +F R
Sbjct: 396 GVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMF-CRTQR 454
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
V+W +IS Y G EA+ LF M + P+ T++ ++S C +LE GK
Sbjct: 455 DVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVH 514
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
Y GG + NV + AL+DMY+KCG + +RELF ++ EK V+SW MI+G L+G+
Sbjct: 515 QYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDAN 574
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
A+++F QM + +++PN +TFL++L ACTHAG++++G F+ M + Y + P L H++CM
Sbjct: 575 SAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRM-QYYSIKPNLKHFACM 633
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
ADLLGR G L+EA D VQSMPI D G+WGTLL ACKIH IEIG VA E +P +
Sbjct: 634 ADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPEND 693
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
Y+ ++N+Y G+WD R +MK + K G S V
Sbjct: 694 GYYIMLSNMYGSMGKWDEAERARELMKERGIGKRAGWSAV 733
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 231/525 (44%), Gaps = 66/525 (12%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ + +++F+ + ++ +YA + + +FD +D WN++I G
Sbjct: 52 HALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNY 111
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS-VCNT 195
K + MR + T+ + L K +H G+ A+ S V ++
Sbjct: 112 FKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSS 171
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY---RHMIYD 252
++ YAKC ++ A L+F I +R VVSW +++ G + D + L R + D
Sbjct: 172 FVYMYAKCGVMEDASLMFDEIV--VRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGD 229
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G + + T+ +C A++ GR +H + G V ++L+SMYSKCG+++ A
Sbjct: 230 GEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEA 289
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
F + D+ SWT++I A+ G ++E L LF+ M+ PD + V ++ G G S
Sbjct: 290 HNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNS 349
Query: 373 GALELGKWFD------NYA-------------CSGGLKD-----------------NVMV 396
+ GK F NY C G + N MV
Sbjct: 350 MMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMV 409
Query: 397 -------------------CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
N+LIDMY K G++ A ++F ++ VV+W T+I+
Sbjct: 410 FGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMF-CRTQRDVVTWNTLISSYTH 468
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK-VYQVNPEL 496
+G + EA+ LF +M+ L PN T + VL AC H LEKG + + +++N L
Sbjct: 469 SGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSL 528
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + D+ + G+L+++ + SM K D W ++ +H
Sbjct: 529 G--TALVDMYAKCGQLEQSRELFNSMKEK-DVISWNVMISGYGLH 570
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 6/326 (1%)
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
+ L L H+ I G +V + + IS YA + VF + + W
Sbjct: 41 QTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQ--KDTFLW 98
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
NSII + + +FY M YD P+ T+ ++++C L +G+ +H
Sbjct: 99 NSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSK 158
Query: 287 YG-FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
G F + +V ++ + MY+KCG ++ A +FD + R VSWTA++ GY D ++ L
Sbjct: 159 SGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLE 218
Query: 346 LFFAMEAAGEVPDLVTVLSMISG---CGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
M G + V ++ G CG GA+ G+ A GL + +V ++L+
Sbjct: 219 CLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLS 278
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MYSKCG++ +A F + +K V SWT++I CA G E L+LF M D+ P+ +
Sbjct: 279 MYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIV 338
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTK 488
+L ++ + +G + L+ +
Sbjct: 339 VSCILLGFGNSMMVREGKAFHGLIVR 364
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 307/574 (53%), Gaps = 36/574 (6%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYA--KCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ I +V + + F + +V A + LD ++ ++ + +V SWNA I G+
Sbjct: 74 KQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYV 133
Query: 132 QMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ G +E L+ M L G ++ D T L + L V + G + D+
Sbjct: 134 ESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDI 193
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N I+ C +L +A VF + +R +V+WNS+I GC +++ Y+ M
Sbjct: 194 FVHNASITMLLSCGELSVAYDVFN--KSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEME 251
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ RP+ T++ ++SSC + L G+ H + +G + + + N L+ MY KCG++
Sbjct: 252 AEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELL 311
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLD----------------------------- 341
+AR LFD M +T VSWT M+ GYA+ G LD
Sbjct: 312 TARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQ 371
Query: 342 --EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
EAL LF M+ PD VT+++ +S C Q GAL++G W +Y L +V + A
Sbjct: 372 GKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTA 431
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+DMY+KCG+I A ++F +P++ ++WT +I G AL+G +AL F +M+ + + P+
Sbjct: 432 LVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPD 491
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TFL VL AC H G +E+G YF+ M+ + V+P+L HYSCM DLLGR G L+EA + V
Sbjct: 492 EITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELV 551
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
++MP+ +DA + G L AC+++ N++IGE A++L E++P + YV +A++Y+ W
Sbjct: 552 KNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+ R +M V+K PG SLV ING F +
Sbjct: 612 EARSARKLMNDKGVEKTPGCSLVEINGIVHEFVL 645
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 209/442 (47%), Gaps = 33/442 (7%)
Query: 13 IYRSSTIN--QWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSD 69
+YR +N WN+ IR V+ + +L++RM ++P+N T+P + K C
Sbjct: 114 LYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYS 173
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ GH++K F DIFV + M C L AY +F+K RD+ +WN+MI G
Sbjct: 174 SCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITG 233
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G + + ++ M ++ + +T++G+ + + L+L K H + G++
Sbjct: 234 CVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFT 293
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGL----------------------------- 220
+ + N + Y KC +L A ++F + +
Sbjct: 294 IPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPE 353
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
++VV WN+II GC + ++L + M PD T+V+ LS+C AL G +
Sbjct: 354 KSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWI 413
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + + +DV++ L+ MY+KCG+I A +F+ + R ++WTA+I G A G+
Sbjct: 414 HHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNA 473
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNA 399
+AL F M G VPD +T L ++S C G +E G K+F + + + +
Sbjct: 474 QDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSC 533
Query: 400 LIDMYSKCGSIGDARELFYALP 421
++D+ + G + +A EL +P
Sbjct: 534 MVDLLGRAGHLEEAEELVKNMP 555
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L KI S + WN+ I V + +AL LF M+ IEP+ +T AC++L
Sbjct: 348 LYKIPEKSVV-PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGA 406
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
IH +I + D+ + T +VDMYAKC + A ++F+++P R+ +W A+I G
Sbjct: 407 LDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICG 466
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
A G + L F M +GI D +T +G+ A H
Sbjct: 467 LALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHG 505
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/490 (35%), Positives = 274/490 (55%), Gaps = 20/490 (4%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
MR + I+ D + + +A + K +H F + G+ +DV V N + Y++C
Sbjct: 100 MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGS 159
Query: 206 LKMAELVFRGIEE--------------------GLRTVVSWNSIIGGCTYGDKFDDSLNF 245
L A L+F + E R++VSW ++I G + ++
Sbjct: 160 LVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERL 219
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ MI + P+ T++SL+ SC A+ G+ +H++ + GF + +++ L+ MY K
Sbjct: 220 FVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGK 279
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG+I SAR +FD M ++ ++WTAMIS YAQ +D A +LF M G P+ +T++S+
Sbjct: 280 CGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSL 339
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+S C +GAL++GKWF Y G++ +V++ ALIDMY+KCG I A+ LF ++ +
Sbjct: 340 LSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDI 399
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
+W M+AG ++G +AL LF +M L ++PN +TF+ L AC+HAG + +G G F
Sbjct: 400 CTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEK 459
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M + + P++ HY CM DLLGR G L EA ++SMP+ + IWG +L ACKIH+N
Sbjct: 460 MIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSN 519
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+GE A L LEP + V M+NIYA RW+ VA +R +K +KK PG S + +N
Sbjct: 520 MGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVN 579
Query: 606 GKTCTFTVED 615
G F + D
Sbjct: 580 GLVHDFKMGD 589
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 221/456 (48%), Gaps = 28/456 (6%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHK--ALLLFRRMKKNDIEPNNLTFPFIAKACAK 66
+ +++ T +N + + E+H AL + M+K DIE ++ P + KAC++
Sbjct: 62 QTQQLHAHITRTHFNHAQQVSFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQ 121
Query: 67 LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN-- 124
+S + IHG VK+ SD+FV ++ MY++C L A LFDKM +RDV SW+
Sbjct: 122 ISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTM 181
Query: 125 --------------------AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
AMI G+ + LE+ LF M + + +T++ L +
Sbjct: 182 IRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIIS 241
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ L K +H++ + G +++ + Y KC +++ A +F ++ + V+
Sbjct: 242 CGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKN--KDVM 299
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
+W ++I + D + + M +G RP+ T+VSLLS C AL G+ H++
Sbjct: 300 TWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYI 359
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G ++DV + LI MY+KCGDI A+ LF DR +W M++GY G ++AL
Sbjct: 360 DKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKAL 419
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDM 403
+LF ME G P+ +T + + C +G + GK F+ GL V ++D+
Sbjct: 420 KLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDL 479
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+ G + +A ++ ++P + W M+A C ++
Sbjct: 480 LGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 293/529 (55%), Gaps = 13/529 (2%)
Query: 51 EPNNLTFPFIAKACA-----KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRL 105
P++ +F F A + + + D ++ +HG V + + +D FV + + +Y K ++
Sbjct: 106 SPDSFSFAFAATSLSSSCSSRGRDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSKV 165
Query: 106 DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQA 164
D A K+FD +P D WN ++ G LE F M VG ++ D T+ +A
Sbjct: 166 DDARKVFDAVPSPDTILWNTLLAGLPGSVALEA----FVRMVEVGRVRPDSTTLASSLRA 221
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
A A H+++ + VH +G+ G+ V +S Y+KC D+ A +F +E+ +V
Sbjct: 222 AAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDP--DLV 279
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
++N++I G + + S+ ++ + +RP+ +T+V+++ + R +H+
Sbjct: 280 AYNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFV 339
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ D D V L ++Y + D++SAR +FD M ++T SW AMISGYAQ G + A+
Sbjct: 340 VKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAV 399
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
LF M+ P+ T+ S +S C Q GAL LG W L+ NV V ALIDMY
Sbjct: 400 ELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMY 459
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCGSI +AR +F + K VVSW MI+G L+G EAL L+ M++ + P TFL
Sbjct: 460 AKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFL 519
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
+VL AC+H G +++G F +MT Y+++P + H +CM DLLGR GKL EALD + P
Sbjct: 520 SVLYACSHGGLVDEGQKVFRVMTNEYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQ 579
Query: 525 KS-DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIY 572
+ G+WG LL AC +H+N ++ + + +LFEL+ +A YV ++N+Y
Sbjct: 580 SAIGPGVWGALLSACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLY 628
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 212/426 (49%), Gaps = 14/426 (3%)
Query: 38 ALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
AL F RM + + P++ T +A A+ S + +HG+ VK V T ++
Sbjct: 195 ALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLM 254
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+Y+KC +DCA LFD+M D D+ ++NA+I G++ G +E + LF + + +
Sbjct: 255 SLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSS 314
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + H L + +H+F + +DAD V + Y + ND++ A +F +
Sbjct: 315 TLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAM 374
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E +T+ SWN++I G + ++ ++ M +P+ TT+ S LS+C AL
Sbjct: 375 PE--KTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSL 432
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G VH +L+V V+ LI MY+KCG I AR +FD M ++ VSW AMISGY
Sbjct: 433 GTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGL 492
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-----WFDNYACSGGLK 391
G EAL+L+ +M A +P T LS++ C G ++ G+ + Y S G++
Sbjct: 493 HGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGIE 552
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS--WTTMIAGCALNGEFVEALDLFH 449
C ++D+ + G + +A +L P+ + W +++ C ++ A
Sbjct: 553 H----CTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNSDLAKLASQ 608
Query: 450 QMMELD 455
++ ELD
Sbjct: 609 KLFELD 614
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I A+ LF+ M++ +++PN T ACA+L +H
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVH 437
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I K +++V T ++DMYAKC + A +FD+M +++V SWNAMI G+ G
Sbjct: 438 RIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGA 497
Query: 138 KVLCLFYNM 146
+ L L+ +M
Sbjct: 498 EALKLYKSM 506
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 281/511 (54%), Gaps = 14/511 (2%)
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD++ + WN +I GF+ + VL + +R G+ D T L +A
Sbjct: 60 LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKA------ 113
Query: 171 LSLLKSVHSFG-----IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
S L++ + F + G+D D V N+ +SA+A C + + +F IE + VVS
Sbjct: 114 FSKLRNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLF--IETAKKDVVS 171
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
W ++I GC + ++L + M G D T+VS+L + + GR VH +
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 286 HYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G + DV V + L+ MYSKCG D A +F+ M R VSW A+I+GY Q EAL
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEAL 291
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
++F M G P+ TV S ++ C Q G+L+ G+W Y L N + AL+DMY
Sbjct: 292 KVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMY 351
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKCG + +A +F LP K V WT MI G A+ G+ + +L+LF QM+ ++PN VTFL
Sbjct: 352 SKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFL 411
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
VL AC H G +++G F LM Y++ P ++HY CM DLLGR G+L+EA+ F++SMP+
Sbjct: 412 GVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPM 471
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ G+WG L C IH+ E+GE++ L +L+PH + Y+ +AN+Y+ +W+ AN+
Sbjct: 472 EPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANV 531
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R +MK V K PG S + +NG F D
Sbjct: 532 RRLMKGKGVDKSPGCSWIEVNGVIHEFIAFD 562
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 218/423 (51%), Gaps = 6/423 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR ++ L+ + R++ + + P+ TFP + KA +KL + Q + HIV
Sbjct: 72 WNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQF-YAHIV 130
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D FVQ ++V +A C +DC+ +LF + +DV SW A+I G + G + L
Sbjct: 131 KFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALE 190
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAY 200
F MR G++ D VT++ + AA + + + VH F + G V DV V + + Y
Sbjct: 191 CFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC A VF E R +VSW ++I G +++ ++L ++ MI +G P+ +T
Sbjct: 251 SKCGYCDDAVKVFN--EMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQST 308
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V S L++C +L QGR +H + L+ + L+ MYSKCG +D A +F+ +
Sbjct: 309 VTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLP 368
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ WTAMI+G A +GD +L LF M + P+ VT L ++S C G ++ G +
Sbjct: 369 AKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLE 428
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
F C L+ NV ++D+ + G + +A + ++P E T W + +GC ++
Sbjct: 429 LFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIH 488
Query: 439 GEF 441
F
Sbjct: 489 KAF 491
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 24/291 (8%)
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
+ S D+ LFD + W +I G++ L + + G +PD T
Sbjct: 47 LRSATKDLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHT 106
Query: 362 VLSMISGCGQSGALELGKWFDNYA--CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
++ + L F YA GL + V N+L+ ++ CG + +R LF
Sbjct: 107 FPLLLKAFSK---LRNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIE 163
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+K VVSWT +I GC NG VEAL+ F +M + + VT ++VL A A L
Sbjct: 164 TAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCA---AAMLRDV 220
Query: 480 W------GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
W G++ + +V ++ S + D+ + G +A+ MP ++ WG
Sbjct: 221 WFGRWVHGFY---VESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVS-WGA 276
Query: 534 LLCA-CKIHRNIEIGEYVAYRLFE-LEPHSAAPYVEMANIYALG----GRW 578
L+ + +R E + + E +EP+ + + LG GRW
Sbjct: 277 LIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRW 327
>gi|357156964|ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Brachypodium distachyon]
Length = 710
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 286/529 (54%), Gaps = 3/529 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM--IVGFAQM 133
IH V ++ T+++ + A C L A ++FD P RDV WN + + +
Sbjct: 171 IHARAVVLGIATNPAFATSLLAVAAPCS-LAYARRVFDAAPHRDVYMWNTLLRVHAHSHA 229
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
L L+ MR G+ D T + A A+ L ++ H + + D V
Sbjct: 230 EPQSSALSLYKRMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALAGDCFVH 289
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ I+ Y + D+ AE VF G RTVVSW +++ G F +++ + ++ +G
Sbjct: 290 SALIAMYCQDGDVADAEQVFLGTAGASRTVVSWTAMVAGYVQNCFFGEAIAVFGAVVAEG 349
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P+ T++S L E L G +VH + FD +V ++N L++MY KCG + SA+
Sbjct: 350 VLPNEITLISFLPCLQGQEWLTAGEMVHGFALKLRFDANVPLLNALVAMYGKCGSVLSAK 409
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFDGM RT VSW M++ Y Q D +A++ F M D VT++S++S C +SG
Sbjct: 410 GLFDGMATRTLVSWNTMVAMYEQNSDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSG 469
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALE GKW A S GL ++ + N L+DMY+KCG I ARE+F +L E VVSW+ MI+
Sbjct: 470 ALETGKWVHELARSHGLDNDARIGNVLVDMYAKCGEIAYAREVFDSLREPGVVSWSAMIS 529
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
A +GE EAL LF M ++PN T AVL AC H+G +++G +FN + YQ++
Sbjct: 530 AYANHGEHQEALKLFSLMKGEGVKPNSFTVTAVLVACGHSGLVDEGLKHFNSIAMEYQMS 589
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+CM D+LGR G+L EA + ++ M ++ D +WG L C++H N+E+ E+VA
Sbjct: 590 PTLEHYACMLDMLGRAGRLVEAYEIIRGMSVQPDKCVWGAFLGGCRLHCNLELAEFVAND 649
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
LF+ + YV MAN+Y G + +R MK ++KK G S V
Sbjct: 650 LFQSGSNDVTFYVLMANMYFEAGMLEDAERMRRAMKEMELKKTAGHSSV 698
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 235/471 (49%), Gaps = 27/471 (5%)
Query: 22 WNSQIREAVDKNEAHK--ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN+ +R + + AL L++RM+ + P++ T+P + ACA + HG
Sbjct: 217 WNTLLRVHAHSHAEPQSSALSLYKRMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGD 276
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF--DKMPDRDVASWNAMIVGFAQMGFLE 137
V+ D FV + ++ MY + + A ++F R V SW AM+ G+ Q F
Sbjct: 277 AVRFALAGDCFVHSALIAMYCQDGDVADAEQVFLGTAGASRTVVSWTAMVAGYVQNCFFG 336
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + +F + G+ + +T++ + L+ + VH F + + DA+V + N +
Sbjct: 337 EAIAVFGAVVAEGVLPNEITLISFLPCLQGQEWLTAGEMVHGFALKLRFDANVPLLNALV 396
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y KC + A+ +F G+ RT+VSWN+++ ++ F+R M+ + D
Sbjct: 397 AMYGKCGSVLSAKGLFDGM--ATRTLVSWNTMVAMYEQNSDGVQAIKFFRRMLTEKVGFD 454
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+VS+LS+C AL G+ VH +G D D + N L+ MY+KCG+I AR +FD
Sbjct: 455 CVTLVSVLSACARSGALETGKWVHELARSHGLDNDARIGNVLVDMYAKCGEIAYAREVFD 514
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + VSW+AMIS YA G+ EAL+LF M+ G P+ TV +++ CG SG ++
Sbjct: 515 SLREPGVVSWSAMISAYANHGEHQEALKLFSLMKGEGVKPNSFTVTAVLVACGHSGLVDE 574
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIA 433
G K F++ A + + ++DM + G + +A E+ + P+K V W +
Sbjct: 575 GLKHFNSIAMEYQMSPTLEHYACMLDMLGRAGRLVEAYEIIRGMSVQPDKCV--WGAFLG 632
Query: 434 GCALN-----GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH--AGFLE 477
GC L+ EFV A DLF N VTF VL A + AG LE
Sbjct: 633 GCRLHCNLELAEFV-ANDLFQS------GSNDVTFY-VLMANMYFEAGMLE 675
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 169/409 (41%), Gaps = 40/409 (9%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTF-PFIAKACAKLSDFLYS- 73
S T+ W + + V +A+ +F + + PN +T F+ C + ++L +
Sbjct: 316 SRTVVSWTAMVAGYVQNCFFGEAIAVFGAVVAEGVLPNEITLISFLP--CLQGQEWLTAG 373
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+M+HG +K F +++ + +V MY KC + A LFD M R + SWN M+ + Q
Sbjct: 374 EMVHGFALKLRFDANVPLLNALVAMYGKCGSVLSAKGLFDGMATRTLVSWNTMVAMYEQN 433
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ + F M + D VT++ + A + L K VH G+D D +
Sbjct: 434 SDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALETGKWVHELARSHGLDNDARIG 493
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N + YAKC ++ A VF + E VVSW+++I + ++L + M +G
Sbjct: 494 NVLVDMYAKCGEIAYAREVFDSLREP--GVVSWSAMISAYANHGEHQEALKLFSLMKGEG 551
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+P+ TV ++L +C LV L H + I + + ++ +
Sbjct: 552 VKPNSFTVTAVLVAC-GHSGLVDEGLKHFNSIAMEYQMSPTLEH---------------- 594
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+ M+ + G L EA + M PD + + GC
Sbjct: 595 -------------YACMLDMLGRAGRLVEAYEIIRGMSVQ---PDKCVWGAFLGGCRLHC 638
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
LEL ++ N G D V + +MY + G + DA + A+ E
Sbjct: 639 NLELAEFVANDLFQSGSND-VTFYVLMANMYFEAGMLEDAERMRRAMKE 686
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 281/543 (51%), Gaps = 34/543 (6%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
LD A LF +P+ N ++ F++ E L L+ ++R G D + L +A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 165 AIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
L+L +H G AD + + I+ YA C + A +F + R V
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSH--RDV 182
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
V+WN +I G + +D L Y M G PD + ++LS+C L G+ +H
Sbjct: 183 VTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQF 242
Query: 284 GIHYGFDLDVSVINTLISMYSKCGD-------------------------------IDSA 312
GF + + +L++MY+ CG + A
Sbjct: 243 IKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDA 302
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
RF+FD M ++ V W+AMISGYA+ EAL+LF M+ VPD +T+LS+IS C
Sbjct: 303 RFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANV 362
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GAL KW YA G + + NALIDMY+KCG++ ARE+F +P K V+SW++MI
Sbjct: 363 GALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMI 422
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
A++G+ A+ LFH+M E ++ PN VTF+ VL AC+HAG +E+G +F+ M +++
Sbjct: 423 NAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRI 482
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+P+ HY CM DL R L++A++ +++MP + IWG+L+ AC+ H IE+GE+ A
Sbjct: 483 SPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAAT 542
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
RL ELEP V ++NIYA RWD V +R +MK V K S + +N + F
Sbjct: 543 RLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFM 602
Query: 613 VED 615
+ D
Sbjct: 603 MAD 605
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 241/504 (47%), Gaps = 43/504 (8%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N +R+ L L+ +++N + +FP + KA +KLS IHG K
Sbjct: 84 NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASK 143
Query: 83 SPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F+ +D F+Q+ ++ MYA C R+ A LFDKM RDV +WN MI G++Q + VL
Sbjct: 144 FGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----GIHIGVDADVSVCNTW- 196
L+ M+ G + D + + + A HA +LS K++H F G +G S+ N +
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263
Query: 197 --------------------------ISAYAKCNDLKMAELVF-RGIEEGLRTVVSWNSI 229
+S YAK ++ A +F R +E+ L V W+++
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDL---VCWSAM 320
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G + ++L + M PD T++S++S+C ALVQ + +H++ GF
Sbjct: 321 ISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGF 380
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ + N LI MY+KCG++ AR +F+ M + +SW++MI+ +A GD D A+ LF
Sbjct: 381 GRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHR 440
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M+ P+ VT + ++ C +G +E G K+F + + ++D+Y +
Sbjct: 441 MKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRAN 500
Query: 409 SIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ A EL +P V+ W ++++ C +GE L F L+L P+ L VL
Sbjct: 501 HLRKAMELIETMPFPPNVIIWGSLMSACQNHGEI--ELGEFAATRLLELEPDHDGALVVL 558
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQ 491
++ EK W L+ K+ +
Sbjct: 559 ---SNIYAKEKRWDDVGLVRKLMK 579
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 154/395 (38%), Gaps = 76/395 (19%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I L L+ MK + EP+ + + ACA + Y + IH I
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP------------------------- 116
+ F +QT++V+MYA C + A +++D++P
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304
Query: 117 ------DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
++D+ W+AMI G+A+ + L LF M+ I D +T++ + A +
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L K +H++ G + + N I YAKC +L A VF + + V+SW+S+I
Sbjct: 365 LVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPR--KNVISWSSMI 422
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
D ++ + M P+ T + +L +C
Sbjct: 423 NAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYAC---------------------- 460
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-----WTAMISGYAQKGDLDEALR 345
S G ++ + F M + R+S + M+ Y + L +A+
Sbjct: 461 -------------SHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAME 507
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
L M P+++ S++S C G +ELG++
Sbjct: 508 LIETMPFP---PNVIIWGSLMSACQNHGEIELGEF 539
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 197/548 (35%), Positives = 307/548 (56%), Gaps = 15/548 (2%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK--LFDKMPDRDVASWNAMIVGFA 131
+ IH ++ + F+ + ++D+ D AY +F+++ ++ ++N M+ G A
Sbjct: 50 KQIHAQMLINSIPKPNFLLSKIIDLK------DLAYASLVFNQLTKPNIYAFNVMLRGLA 103
Query: 132 QMGFLEKVLC--LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ + C L+Y ++ +G++A+ T L A + + L K H G+D D
Sbjct: 104 TT-WKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGD 162
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V ++ I+ YA+C ++ A VF E G R +VSWNS+I G + +++ + M
Sbjct: 163 EYVNHSLITMYARCGEMGFARKVFD--EMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEM 220
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+GF PD T+VS+L +C L GR V + +++ + + LI MY KCGD+
Sbjct: 221 REEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDL 280
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
SAR +FD M ++ V+W A+I+GYAQ G +EA+ LF M AG PD VT++ ++S C
Sbjct: 281 ISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSAC 340
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
GAL+LGKW + +A GL+ +V V +ALIDMY+KCGS+ DA +F ++P K VSW
Sbjct: 341 STIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWN 400
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD--LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
MI+ A +G+ EAL LF +M + + ++PN +TF+ VL AC HAG +++G F M
Sbjct: 401 AMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMN 460
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ + P++ HYSCM DL R G L EA D ++ MP K D + G+LL AC+ RN ++G
Sbjct: 461 LSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVG 520
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E V E+E ++ YV + IYA RWD A +R +M++ V K PG S + I
Sbjct: 521 ERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAH 580
Query: 608 TCTFTVED 615
F D
Sbjct: 581 VHEFHAGD 588
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 208/386 (53%), Gaps = 5/386 (1%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
L+ ++K ++ NN T+PF+ AC + ++ ++ H + K+ D +V +++ MYA
Sbjct: 115 LYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYA 174
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
+C + A K+FD+M DRD+ SWN+MI G+++MGF ++ + LF MR G + D +T++
Sbjct: 175 RCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVS 234
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ A L L + V F + ++ + + + I Y KC DL A VF +
Sbjct: 235 VLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPN-- 292
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ VV+WN+II G ++++ + M G PD T++ +LS+C AL G+ V
Sbjct: 293 KDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWV 352
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
+H G DV V + LI MY+KCG +D A +F+ M + VSW AMIS A G
Sbjct: 353 ETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQA 412
Query: 341 DEALRLFFAMEA-AGEV-PDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVC 397
EAL LF M G V P+ +T + ++S C +G ++ G+ F++ S GL V
Sbjct: 413 QEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHY 472
Query: 398 NALIDMYSKCGSIGDARELFYALPEK 423
+ ++D+ ++ G + +A +L +P K
Sbjct: 473 SCMVDLCARAGLLYEAWDLIKKMPGK 498
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 9/337 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I +A+ LF M++ EP+ +T + AC L D + + G ++
Sbjct: 197 WNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVL 256
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + ++ + ++DMY KC L A ++FD MP++DV +WNA+I G+AQ G + +
Sbjct: 257 EKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIV 316
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF MR G D VT++ + A L L K V + G+ DV V + I YA
Sbjct: 317 LFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYA 376
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDVT 259
KC L A VF + + VSWN++I + + ++L+ +R M D +P+
Sbjct: 377 KCGSLDDAVRVFESMPH--KNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDI 434
Query: 260 TVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T + +LS+CV + +GR L S + +G V + ++ + ++ G + A L
Sbjct: 435 TFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKK 494
Query: 319 MCDRTRVSWTAMISGYAQK---GDLDE-ALRLFFAME 351
M + + G Q+ D+ E ++LF ME
Sbjct: 495 MPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEME 531
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 314/604 (51%), Gaps = 13/604 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + ++ + L RM+++ + P+ +TF +C IH +V
Sbjct: 113 WTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVV 172
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFAQMGFLEKVL 140
S D V +++MY KC L A ++F KM R+V SW+ M A G + + L
Sbjct: 173 DSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEAL 232
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M L+GI+A ++ + A + + +HS G ++++ V N ++ Y
Sbjct: 233 RHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMY 292
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C ++ A VF ++E LR VVSWN ++ + D+ D++ Y+ M R D T
Sbjct: 293 GRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVT 349
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VSLLS+C E + GR++H ++ + +V V N L+SMY+KCG AR +FD M
Sbjct: 350 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 409
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAM---EAAGEV----PDLVTVLSMISGCGQSG 373
R+ +SWT +IS Y ++ + EA LF M E G PD + +++++ C
Sbjct: 410 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVS 469
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMI 432
ALE GK A S GL + V A++++Y KCG I + R +F + + V W MI
Sbjct: 470 ALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMI 529
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ- 491
A A G+ EAL LF +M +RP+ +F+++L AC+H G ++G YF MT Y+
Sbjct: 530 AVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRN 589
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V + H+ C+ADLLGR G+LKEA +F++ +P+K DA W +LL AC+ HR+++ + VA
Sbjct: 590 VTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVA 649
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+L LEP A YV ++NIYA +W VA +R M VKK G S + I F
Sbjct: 650 NKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDF 709
Query: 612 TVED 615
D
Sbjct: 710 ATGD 713
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 256/517 (49%), Gaps = 18/517 (3%)
Query: 29 AVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFW-S 87
++D+++ A+L ++K + N T+ + + CA+ + IH VK
Sbjct: 21 SLDRSDIASAVL---DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPG 77
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
++ + +V MYA CD A FD + R++ SW ++ FA G ++ L MR
Sbjct: 78 NLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR 137
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G++ D VT + + + L +H + ++ D V N ++ Y KC L
Sbjct: 138 QDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLS 197
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF +E R V+SW+ + G ++L +R M+ G + + +V++LS+
Sbjct: 198 HAKRVFAKMER-TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSA 256
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR--V 325
C P + GRL+HS GF+ ++ V N +++MY +CG ++ AR +FD M + R V
Sbjct: 257 CSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SW M+S Y +A++L+ M+ D VT +S++S C + + LG+
Sbjct: 317 SWNIMLSAYVHNDRGKDAIQLYQRMQLRA---DKVTYVSLLSACSSAEDVGLGRVLHKQI 373
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
+ L+ NV+V NAL+ MY+KCGS +AR +F + +++++SWTT+I+ EA
Sbjct: 374 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 433
Query: 446 DLFHQMMELD-------LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
LF QM+EL+ ++P+ + F+ +L AC LE+G + ++ +
Sbjct: 434 HLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAV 492
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + +L G+ G+++E + + D +W ++
Sbjct: 493 GTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMI 529
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 209/427 (48%), Gaps = 21/427 (4%)
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISAYAKCNDLKM 208
++A+ T L Q A+ L + +HS + H + ++ + N +S YA C+
Sbjct: 38 AVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGD 97
Query: 209 AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
A+ F +E+ R + SW ++ + ++L M DG RPD T ++ L SC
Sbjct: 98 AKAAFDALEQ--RNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSC 155
Query: 269 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR--VS 326
PE+L G +H + ++D V N L++MY KCG + A+ +F M +RTR +S
Sbjct: 156 GDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM-ERTRNVIS 214
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W+ M +A G++ EALR F M G +++++S C ++ G+ +
Sbjct: 215 WSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIA 274
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--KTVVSWTTMIAGCALNGEFVEA 444
G + ++V NA++ MY +CG++ +AR++F A+ E + VVSW M++ N +A
Sbjct: 275 LSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDA 334
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY----S 500
+ L+ +M LR ++VT++++L AC+ A + G ++ K VN EL +
Sbjct: 335 IQLYQRM---QLRADKVTYVSLLSACSSA----EDVGLGRVLHKQI-VNDELEKNVIVGN 386
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
+ + + G EA M +S W T++ A R + ++ ++ ELE +
Sbjct: 387 ALVSMYAKCGSHTEARAVFDKMEQRSIIS-WTTIISAYVRRRLVAEACHLFQQMLELEKN 445
Query: 561 SAAPYVE 567
++ V+
Sbjct: 446 GSSQRVK 452
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 215/631 (34%), Positives = 318/631 (50%), Gaps = 59/631 (9%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S I +WN I + +AL +F+RM + + + N + ++ +L+ L+ +M
Sbjct: 57 SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
D+ M+ Y + L A +LF++MP+RDV SWN ++ G+AQ G
Sbjct: 117 PE---------RDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIGVDADVS 191
++ +F M + + V+ L A + L L S ++ + VS
Sbjct: 168 VDDARRVFDRM----PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL-------VS 216
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
N + + K + A F ++ +R VVSWN+II G + D++ R +
Sbjct: 217 -WNCLLGGFVKKKKIVEARQFFDSMK--VRDVVSWNTIITGYAQNGEIDEA----RQLFD 269
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGR--------------------LVHSHGIHYGFDL 291
+ DV T +++S + + + R V + +L
Sbjct: 270 ESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKEL 329
Query: 292 -------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+VS NT+I+ Y++CG I A+ LFD M R VSW AMI+GY+Q G EAL
Sbjct: 330 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEAL 389
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
RLF ME G + + S +S C ALELGK GG + V NAL+ MY
Sbjct: 390 RLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 449
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
KCGSI +A +LF + K +VSW TMIAG + +G EAL F M L+P+ T +
Sbjct: 450 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMV 509
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
AVL AC+H G ++KG YF+ MT+ Y V P HY+CM DLLGR G L+EA + +++MP
Sbjct: 510 AVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPF 569
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ DA IWGTLL A ++H N E+ E A ++F +EP ++ YV ++N+YA GRW V L
Sbjct: 570 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 629
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R M+ VKK PG S + I KT TF+V D
Sbjct: 630 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 660
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 54/284 (19%)
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D D+ N IS Y + G A +F M + VS+ AMISGY + G+ + A LF
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLF-- 113
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
E+P+ +L W N +I Y + +
Sbjct: 114 ----DEMPE----------------RDLVSW-----------------NVMIKGYVRNRN 136
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+G ARELF +PE+ V SW T+++G A NG +A +F +M E N V++ A+L A
Sbjct: 137 LGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPE----KNDVSWNALLSA 192
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
LE+ F + N L ++C+ +K K+ EA F SM ++ D
Sbjct: 193 YVQNSKLEEACVLFG-----SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVR-DVV 246
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEP-HSAAPYVEMANIY 572
W T++ +N EI E A +LF+ P H + M + Y
Sbjct: 247 SWNTIITG--YAQNGEIDE--ARQLFDESPVHDVFTWTAMVSGY 286
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/600 (31%), Positives = 323/600 (53%), Gaps = 9/600 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRM---KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
W++ I + + +ALL F M +N I PN F + ++C+ F I
Sbjct: 109 SWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIF 168
Query: 78 GHIVKSPFW-SDIFVQTTMVDMYAKCD-RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
++K+ ++ S + V ++DM+ K + A +FDKM +++ +W MI ++Q+G
Sbjct: 169 AFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGL 228
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
L+ + LF + + D T+ L A + + SL K +HS+ I G+ +DV V T
Sbjct: 229 LDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCT 288
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAK ++ + +F + V+SW ++I G + +++ + +M++
Sbjct: 289 LVDMYAKSAAVENSRKIFNTMLH--HNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVT 346
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T S+L +C G+ +H I G V N+LI+MY++ G ++ AR
Sbjct: 347 PNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKA 406
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + ++ +S+ A+ D DE+ G P T ++SG G +
Sbjct: 407 FNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASP--FTYACLLSGAACIGTI 464
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ G N+ + NALI MYSKCG+ A ++F + + V++WT++I+G
Sbjct: 465 VKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGF 524
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G +AL+LF++M+E+ ++PN VT++AVL AC+H G +++ W +FN M + ++P
Sbjct: 525 AKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPR 584
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HY+CM DLLGR G L EA++F+ SMP +DA +W T L +C++HRN ++GE+ A ++
Sbjct: 585 MEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKIL 644
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
E EPH A Y+ ++N+YA GRWD VA LR MK+ ++ K G S + ++ + F V D
Sbjct: 645 EREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGD 704
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 166/315 (52%), Gaps = 5/315 (1%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L +A I + +L L K +H I G+ D + N+ I+ Y+KC D + A +FR +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY---DGFRPDVTTVVSLLSSCVCPEALVQG 277
R +VSW++II +L + HM+ + P+ +LL SC P G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 278 RLVHSHGIHYG-FDLDVSVINTLISMYSKCG-DIDSARFLFDGMCDRTRVSWTAMISGYA 335
+ + + G FD V V LI M++K G DI SAR +FD M + V+WT MI+ Y+
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q G LD+A+ LF + + PD T+ S++S C + LGK ++ GL +V
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V L+DMY+K ++ ++R++F + V+SWT +I+G + + EA+ LF M+
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344
Query: 456 LRPNRVTFLAVLQAC 470
+ PN TF +VL+AC
Sbjct: 345 VTPNCFTFSSVLKAC 359
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 204/437 (46%), Gaps = 11/437 (2%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM--P 116
+ KAC + + +++H ++ S D + +++ +Y+KC + A +F M
Sbjct: 44 LLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHH 103
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSL 173
RD+ SW+A+I FA + L F +M I + L ++ + +
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 174 LKSVHSFGIHIG-VDADVSVCNTWISAYAKCN-DLKMAELVFRGIEEGLRTVVSWNSIIG 231
++ +F + G D+ V V I + K D++ A +VF ++ + +V+W +I
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQH--KNLVTWTLMIT 221
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ DD+++ + ++ + PD T+ SLLS+CV E G+ +HS I G
Sbjct: 222 RYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLAS 281
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
DV V TL+ MY+K ++++R +F+ M +SWTA+ISGY Q EA++LF M
Sbjct: 282 DVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNML 341
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
P+ T S++ C +GK GL V N+LI+MY++ G++
Sbjct: 342 HGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTME 401
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
AR+ F L EK ++S+ T A + E+ + H++ + + T+ +L
Sbjct: 402 CARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAA 459
Query: 472 HAGFLEKGWGYFNLMTK 488
G + KG L+ K
Sbjct: 460 CIGTIVKGEQIHALIVK 476
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ W + I V + +A+ LF M + PN TF + KACA L DF + +HG
Sbjct: 314 VMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+K + V ++++MYA+ ++CA K F+ + ++++ S+N A L+
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNT--AADANAKALDS 431
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ + G+ A T L A + + +H+ + G ++ + N IS
Sbjct: 432 DESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALIS 491
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC + + A VF + G R V++W SII G +L + M+ G +P+
Sbjct: 492 MYSKCGNKEAALQVFNDM--GYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNE 549
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
T +++LS+C L+ H + +HY +
Sbjct: 550 VTYIAVLSAC-SHVGLIDEAWKHFNSMHYNHSI 581
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 309/586 (52%), Gaps = 8/586 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + A + + F MK++ +P+ TF I ACA L + +H ++
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMI 437
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F S++FV +VDMYAK L A K F+ M D SWNA+IVG+ Q + ++
Sbjct: 438 KNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFF 497
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G+ D V++ + A + K + H + +G+D ++ I Y
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYV 557
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A VF + R VVS N++I G T +++++ ++ + G +P T
Sbjct: 558 KCGVVLAARDVFYSMP--YRNVVSINALIAGYTM-SHLEEAIHLFQEIQMVGLKPTEVTF 614
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS--VINTLISMYSKCGDIDSARFLFDGM 319
LL C L GR +H + +GF L S V +L+ MY + LF +
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGF-LSSSEMVCVSLLCMYMNSQRFADSETLFSEL 673
Query: 320 -CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ V WTA+ISGYAQ+ ++AL+ + M + +PD T S++ C +L+ G
Sbjct: 674 QYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTG 733
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCAL 437
+ + G + + C++LIDMY+KCG + + ++F+ +P + +V+SW +MI G A
Sbjct: 734 QEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAK 793
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG EAL++F QM + + P+ VTFL VL AC+HAG + +G F+LM Y++ P ++
Sbjct: 794 NGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVD 853
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
H CM D+LGR G L EA +F+ + K+D +W TLL AC+ H + G+ A +L EL
Sbjct: 854 HLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMEL 913
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+P S++ YV ++ +YA W G +LR MK VKK PG S +
Sbjct: 914 KPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWIE 959
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 252/518 (48%), Gaps = 10/518 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + A +A+ F +KK ++ + + A A LS Y M+H +
Sbjct: 277 WNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAI 336
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K +++V + +V+MYAKC ++D A ++F+ + +R++ WNAM+ GFAQ G ++V+
Sbjct: 337 KEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVME 396
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ G Q D T + A +L +H+ I +++ V N + YA
Sbjct: 397 FFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYA 456
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K LK A F ++ + VSWN+II G + D++ +R M+ +G PD ++
Sbjct: 457 KSGALKEARKQFEFMK--IHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSL 514
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S++S+C + QG+ H + G D ++LI MY KCG + +AR +F M
Sbjct: 515 ASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPY 574
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VS A+I+GY L+EA+ LF ++ G P VT ++ GC + L LG+
Sbjct: 575 RNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 382 DNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
G L + MVC +L+ MY D+ LF L K +V WT +I+G A
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+AL + M ++ P++ TF +VL+AC L+ G +L ++ ++
Sbjct: 694 HHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSL---IFHTGFNMDEI 750
Query: 500 SC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+C + D+ + G +K +L MP ++ W +++
Sbjct: 751 TCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMI 788
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 208/406 (51%), Gaps = 12/406 (2%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D T+++ Y RL A KLF ++P+ +V +WN MI G A+ GF E+ + F ++
Sbjct: 242 DQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G++A ++ + A L+ VH+ I G+D +V V + ++ YAKC+ +
Sbjct: 302 KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMD 361
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF + E R +V WN+++GG + + F+ +M G +PD T S+ S+
Sbjct: 362 AAKQVFNSLGE--RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSA 419
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C L G +H+ I F ++ V N L+ MY+K G + AR F+ M VSW
Sbjct: 420 CASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSW 479
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
A+I GY Q+ DEA +F M + G +PD V++ S++S C + G+
Sbjct: 480 NAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVK 539
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
GL + ++LIDMY KCG + AR++FY++P + VVS +IAG ++ EA+ L
Sbjct: 540 VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMS-HLEEAIHL 598
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---------WGYFN 484
F ++ + L+P VTF +L C A L G WG+ +
Sbjct: 599 FQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLS 644
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 238/538 (44%), Gaps = 38/538 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + +D + F M + + PN TF + AC+ L D Y + +H +
Sbjct: 110 WNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVF 169
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F F Q ++DMYAKC L A +FD + D SW +I G+ + GF + +
Sbjct: 170 KMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVK 229
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ VG D + ++ T I+AY
Sbjct: 230 VFDKMQRVGHVPDQIALV-----------------------------------TVINAYV 254
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
L A +F I VV+WN +I G +++++F+ + G + +++
Sbjct: 255 ALGRLADARKLFTQIPN--PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+ L G +VH+ I G D +V V + L++MY+KC +D+A+ +F+ + +
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V W AM+ G+AQ G E + F M+ G PD T S+ S C L+ G
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N+ V NAL+DMY+K G++ +AR+ F + VSW +I G
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA +F +M+ + P+ V+ +++ AC + ++G L+ KV ++ S
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKV-GLDTSTCAGSS 551
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+ D+ + G + A D SMP ++ I + H I + ++ L+P
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLEEAIHLFQEIQMVGLKP 609
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 30/280 (10%)
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+AL +++HS + G L + N ++ +Y KCG++D A+ F + + +W +++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG-----------QSGALELGKW 380
S Y G ++ F M G P+ T ++S C G ++G
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFG 174
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
F ++ C GGL IDMY+KC ++ DAR +F VSWTT+IAG +G
Sbjct: 175 FRSF-CQGGL----------IDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGF 223
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+EA+ +F +M + P+++ + V+ A G L F + NP + ++
Sbjct: 224 PMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIP-----NPNVVAWN 278
Query: 501 CMADLLGRKGKLKEALDF---VQSMPIKSDAGIWGTLLCA 537
M ++G +EA+ F ++ +K+ G++L A
Sbjct: 279 VMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA 318
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/596 (32%), Positives = 304/596 (51%), Gaps = 3/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I ++ + + R M+ E + TF + K A F Q +H I+
Sbjct: 67 WNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + +++ + ++DMYAKC++L+ AY F + + SWNAMI G+AQ G E
Sbjct: 127 KMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFW 186
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G + D T L A +L +H I G++ ++CN I++Y+
Sbjct: 187 LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYS 246
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A+ +F G+R +V+WNS++ + D + M GF PD+ +
Sbjct: 247 KCGSLDDAKRIFDS-SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSY 305
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARFLFDGM 319
S++S+C GR +H I GF+ V + N LISMY K G + A +F+ +
Sbjct: 306 TSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESL 365
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ RVSW ++++G +Q G ++A++ F M +A D + +++ C +LG+
Sbjct: 366 EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQ 425
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
A GL+ N V ++LI MYSKCG I DAR F + + ++W ++ G A +G
Sbjct: 426 QIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHG 485
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ ALDLF M ++ + +TF+AVL AC+H G +E+G + M Y V P + HY
Sbjct: 486 QCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHY 545
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C DL GR G+L+EA ++ MP K D +W T L AC+ NIE+ VA L E+EP
Sbjct: 546 ACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEP 605
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N+Y RWD A ++ +MK VKK PG S + +N F +D
Sbjct: 606 EEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQD 661
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 186/406 (45%), Gaps = 5/406 (1%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H VK +D++ +++ Y KC L A LFD+MP RD SWN MI G G L
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E + MR G + D T + + A L + VHS I +G +V +
Sbjct: 81 EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC L+ A L F I + VSWN++I G + + M +G +
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISK--HNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T LL + +H I +G +L ++ N LI+ YSKCG +D A+ +F
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 317 DGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
D R V+W ++++ Y + D A +L M+ G PDL + S+IS C
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKC--GSIGDARELFYALPEKTVVSWTTMIA 433
G+ G + +V + NALI MY K GS+ +A +F +L K VSW +++
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
G + G +A+ F M + + +F AVL++C+ + G
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLG 424
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 166/361 (45%), Gaps = 7/361 (1%)
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
HS + +G ADV CN ++ Y KC +L+ A+++F E +R VSWN++I G
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFD--EMPMRDSVSWNTMIAGHINCG 78
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+ S + R M GF D T S+L G+ VHS I G+ +V +
Sbjct: 79 NLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MY+KC ++ A F + VSW AMI+GYAQ GD + A L ME GE
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T ++ + L GL+ +CNALI YSKCGS+ DA+ +F
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 418 YALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
+ + +V+W +++A L + A L M E P+ ++ +++ AC +
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318
Query: 477 EKGWGYFNLMTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
G L+ K Q P N M L G +KEAL +S+ K D W ++
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMY-LKSDYGSMKEALCIFESLEFK-DRVSWNSI 376
Query: 535 L 535
L
Sbjct: 377 L 377
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 130/295 (44%), Gaps = 10/295 (3%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL L HS + G DV N +++ Y KC ++ SA LFD M R VSW MI+
Sbjct: 13 ALANLLLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIA 72
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G+ G+L+ + + M + G D T SM+ G +G LG+ + G +
Sbjct: 73 GHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAE 132
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
NV +AL+DMY+KC + DA F ++ + VSW MI G A G+ A L M
Sbjct: 133 NVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCME 192
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL--GRKG 510
+ + + T+ +L A F L K+ + EL + C A + + G
Sbjct: 193 QEGEKVDDGTYAPLLPLLDDADFCNLT---SQLHGKIIKHGLELVNTMCNALITSYSKCG 249
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF-ELEPHSAAP 564
L +A S D W +LL A + E +A++L +++ H P
Sbjct: 250 SLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQ----EDLAFKLLIDMQEHGFEP 300
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 210/630 (33%), Positives = 319/630 (50%), Gaps = 51/630 (8%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLY 72
++ I WN I + AL +F M +++ + N + ++ A L+ L+
Sbjct: 41 FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLF 100
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+M D+F M+ Y + RL A+KLFD MP +DV SWNAM+ G+AQ
Sbjct: 101 DKMPE---------RDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQ 151
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGI------ 182
GF+++ +F M + ++ GL A +H L L +S ++ +
Sbjct: 152 NGFVDEAREVFNKM----PHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCL 207
Query: 183 -------HIGVDA----------DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
++ DA DV NT IS YA+ DL A+ +F E +R V +
Sbjct: 208 MGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN--ESPIRDVFT 265
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
W +++ G D++ ++ M + +++ L + ++ G L +
Sbjct: 266 WTAMVSGYVQNGMVDEARKYFDEM---PVKNEISYNAMLAGYVQYKKMVIAGELFEAMPC 322
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
++S NT+I+ Y + G I AR LFD M R VSW A+ISGYAQ G +EAL
Sbjct: 323 R-----NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALN 377
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
+F M+ GE + T +S C ALELGK G + V NAL+ MY
Sbjct: 378 MFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYF 437
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCGS +A ++F + EK VVSW TMIAG A +G +AL LF M + ++P+ +T +
Sbjct: 438 KCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVG 497
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL AC+H+G +++G YF M + Y V P HY+CM DLLGR G+L+EA + +++MP
Sbjct: 498 VLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFD 557
Query: 526 SDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLR 585
A WG LL A +IH N E+GE A +F++EP ++ YV ++N+YA GRW V +R
Sbjct: 558 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMR 617
Query: 586 TMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ M+ V+K G S V + K TF+V D
Sbjct: 618 SKMREAGVQKVTGYSWVEVQNKIHTFSVGD 647
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 283/510 (55%), Gaps = 6/510 (1%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
AYK+FDKMP+R++ +W MI FAQ+G + LF +M L G D T + A
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC---NDLKMAELVFRGIEEGLRTVV 224
L+L K +HS I +G+ DV V + + YAKC + + VF + E V+
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE--HNVM 126
Query: 225 SWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
SW +II + D +++ + MI RP+ + S+L +C G V+S+
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ G V N+LISMY++ G ++ AR FD + ++ VS+ A++ GYA+ +EA
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
LF + G T S++SG GA+ G+ GG K N +CNALI M
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
YS+CG+I A ++F + ++ V+SWT+MI G A +G AL++FH+M+E +PN +T+
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
+AVL AC+H G + +G +FN M K + + P + HY+CM DLLGR G L EA++F+ SMP
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426
Query: 524 IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVAN 583
+ +DA +W TLL AC++H N E+G + A + E EP A Y+ ++N++A G+W V
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 486
Query: 584 LRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+R MK + K G S + + + F V
Sbjct: 487 IRKSMKERNLIKEAGCSWIEVENRVHRFHV 516
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 212/424 (50%), Gaps = 8/424 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I A A+ LF M+ + P+ T+ + AC +L + +H ++
Sbjct: 24 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 83
Query: 82 KSPFWSDIFVQTTMVDMYAKC---DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ D+ V ++VDMYAKC +D + K+F++MP+ +V SW A+I +AQ G +K
Sbjct: 84 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDK 143
Query: 139 -VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF M I+ + + + +A + + V+S+ + +G+ + V N+ I
Sbjct: 144 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 203
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S YA+ ++ A F + E + +VS+N+I+ G K +++ + + G
Sbjct: 204 SMYARSGRMEDARKAFDILFE--KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 261
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T SLLS A+ +G +H + G+ + + N LISMYS+CG+I++A +F+
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 321
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M DR +SWT+MI+G+A+ G AL +F M G P+ +T ++++S C G +
Sbjct: 322 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 381
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G K F++ G+ + ++D+ + G + +A E ++P + W T++ C
Sbjct: 382 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 441
Query: 436 ALNG 439
++G
Sbjct: 442 RVHG 445
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 13/287 (4%)
Query: 18 TINQWNSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ W + I E K A+ LF +M I PN+ +F + KAC LSD + +
Sbjct: 124 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 183
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
+ + VK S V +++ MYA+ R++ A K FD + ++++ S+NA++ G+A+
Sbjct: 184 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 243
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E+ LF + GI T L A + + +H + G ++ +CN
Sbjct: 244 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 303
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
IS Y++C +++ A VF +E+ R V+SW S+I G +L + M+ G +P
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMED--RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 361
Query: 257 DVTTVVSLLSSCVCPEALVQGR-----LVHSHGI-----HYGFDLDV 293
+ T V++LS+C + +G+ + HGI HY +D+
Sbjct: 362 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDL 408
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 305/596 (51%), Gaps = 6/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V+ A L++ MK + P+ TF I K A Q +H IV
Sbjct: 70 WNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIV 129
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++ + ++DMYAKC+R+ A+ +F +P R+ SWNA+I GF G +
Sbjct: 130 KMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFW 189
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G++ D T L K L +H I GV D +VCN I++Y+
Sbjct: 190 LLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYS 249
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L+ AE VF G G R +V+WNS++ D+ + + + M GF PD+ T
Sbjct: 250 QCGSLEDAERVFDG-AVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTY 308
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY--SKCGDIDSARFLFDGM 319
+++S+C + G+ +H I G + V + N +I+MY S ++ A +F M
Sbjct: 309 TTIISACSHKD---NGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSM 365
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ RVSW ++++G++Q G + AL+LF M A D +++ C L+LG+
Sbjct: 366 ESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQ 425
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G + N V ++LI MYSKCG I DAR+ F + + ++W +++ A +G
Sbjct: 426 QIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHG 485
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ AL LF QM + ++ + +TF+A L AC+H G +E+G M Y ++P + HY
Sbjct: 486 QGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHY 545
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C DL GR G L EA ++SMP DA +W TLL AC+ +IE+ VA L ELEP
Sbjct: 546 ACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEP 605
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N+Y RWD A + +M+ +VKK PG S + + + F +D
Sbjct: 606 EEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADD 661
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 192/410 (46%), Gaps = 10/410 (2%)
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDR--LDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ H +K +DI+ ++ Y +C L A LFD+M RD +WN MI G+
Sbjct: 20 ITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVN 79
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G L L+ +M+ G+ D T + + A L + + VHS + +G + V
Sbjct: 80 SGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYA 139
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ + YAKC ++ A +VF+ I R VSWN++I G D + R M +
Sbjct: 140 GSALLDMYAKCERVRDAFMVFKCIPR--RNSVSWNALIAGFVLEGDHDTAFWLLRCMEEE 197
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G R D T LL+ + +H I +G D +V N I+ YS+CG ++ A
Sbjct: 198 GVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDA 257
Query: 313 RFLFDGMC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+FDG R V+W +M++ + + A +LF M+ G PD+ T ++IS C
Sbjct: 258 ERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSH 317
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMY--SKCGSIGDARELFYALPEKTVVSWT 429
+ GK GL+ V +CNA+I MY S S+ DA +F+++ K VSW
Sbjct: 318 K---DNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWN 374
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+++ G + G AL LF M + + F AVL++C+ L+ G
Sbjct: 375 SILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLG 424
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 12/364 (3%)
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCND--LKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
H I +G AD+ N +S Y +C+ L A +F E R V+WN++I G
Sbjct: 21 THCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFD--EMSHRDTVTWNTMISGYV 78
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+ Y+ M G PD T S+L C L G+ VHS + G++ V
Sbjct: 79 NSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVY 138
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
+ L+ MY+KC + A +F + R VSW A+I+G+ +GD D A L ME G
Sbjct: 139 AGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEG 198
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D T +++ + +L G++ + VCNA I YS+CGS+ DA
Sbjct: 199 VRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAE 258
Query: 415 ELF-YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+F A+ + +V+W +M+A + A LF M + P+ T+ ++ AC+H
Sbjct: 259 RVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHK 318
Query: 474 GFLEKGWGYFNLMTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
+ G L+ K + Q+ P N M L +++AL+ SM K D W
Sbjct: 319 ---DNGKSLHGLVIKRGLEQLVPICNAVIAMY-LESSSNSMEDALNVFHSMESK-DRVSW 373
Query: 532 GTLL 535
++L
Sbjct: 374 NSIL 377
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 11/287 (3%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARFLFDGMCDRTRVSWTAM 330
AL + H I G D+ N ++S Y++C G + A LFD M R V+W M
Sbjct: 14 ALYNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTM 73
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
ISGY G L A L+ +M++ G +PD T S++ G + L++G+ + G
Sbjct: 74 ISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGY 133
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+++V +AL+DMY+KC + DA +F +P + VSW +IAG L G+ A L
Sbjct: 134 EEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRC 193
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK- 509
M E +R + TF +L F + L K+ + + ++ C A +
Sbjct: 194 MEEEGVRLDDGTFSPLLTLLDEKKFYKLT---MQLHCKIIKHGVQFDNTVCNATITSYSQ 250
Query: 510 -GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
G L++A D W ++L A H E A++LF
Sbjct: 251 CGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKE----TAFKLF 293
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 283/510 (55%), Gaps = 6/510 (1%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
AYK+FDKMP+R++ +W MI FAQ+G + LF +M L G D T + A
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC---NDLKMAELVFRGIEEGLRTVV 224
L+L K +HS I +G+ DV V + + YAKC + + VF + E V+
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE--HNVM 121
Query: 225 SWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
SW +II + D +++ + MI RP+ + S+L +C G V+S+
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ G V N+LISMY++ G ++ AR FD + ++ VS+ A++ GYA+ +EA
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
LF + G T S++SG GA+ G+ GG K N +CNALI M
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
YS+CG+I A ++F + ++ V+SWT+MI G A +G AL++FH+M+E +PN +T+
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
+AVL AC+H G + +G +FN M K + + P + HY+CM DLLGR G L EA++F+ SMP
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421
Query: 524 IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVAN 583
+ +DA +W TLL AC++H N E+G + A + E EP A Y+ ++N++A G+W V
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 481
Query: 584 LRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+R MK + K G S + + + F V
Sbjct: 482 IRKSMKERNLIKEAGCSWIEVENRVHRFHV 511
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 212/424 (50%), Gaps = 8/424 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I A A+ LF M+ + P+ T+ + AC +L + +H ++
Sbjct: 19 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 78
Query: 82 KSPFWSDIFVQTTMVDMYAKC---DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ D+ V ++VDMYAKC +D + K+F++MP+ +V SW A+I +AQ G +K
Sbjct: 79 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDK 138
Query: 139 -VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF M I+ + + + +A + + V+S+ + +G+ + V N+ I
Sbjct: 139 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 198
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S YA+ ++ A F + E + +VS+N+I+ G K +++ + + G
Sbjct: 199 SMYARSGRMEDARKAFDILFE--KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 256
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T SLLS A+ +G +H + G+ + + N LISMYS+CG+I++A +F+
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 316
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M DR +SWT+MI+G+A+ G AL +F M G P+ +T ++++S C G +
Sbjct: 317 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 376
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G K F++ G+ + ++D+ + G + +A E ++P + W T++ C
Sbjct: 377 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 436
Query: 436 ALNG 439
++G
Sbjct: 437 RVHG 440
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 13/287 (4%)
Query: 18 TINQWNSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ W + I E K A+ LF +M I PN+ +F + KAC LSD + +
Sbjct: 119 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 178
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
+ + VK S V +++ MYA+ R++ A K FD + ++++ S+NA++ G+A+
Sbjct: 179 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 238
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E+ LF + GI T L A + + +H + G ++ +CN
Sbjct: 239 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 298
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
IS Y++C +++ A VF +E+ R V+SW S+I G +L + M+ G +P
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMED--RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 356
Query: 257 DVTTVVSLLSSCVCPEALVQGR-----LVHSHGI-----HYGFDLDV 293
+ T V++LS+C + +G+ + HGI HY +D+
Sbjct: 357 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDL 403
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 294/556 (52%), Gaps = 40/556 (7%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ +AC + ++ IH H +K+ +D V + +Y C+++ A +LFD++P+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V WN +I +A G + + L+++M +G++ + T + +A + +HS
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
G+++DV VC + YAKC L A+ +F + R VV+WN++I GC+
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH--RDVVAWNAMIAGCSLYGLC 191
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
DD++ M +G P+ +T+V +L +C C
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTCQC----------------------------- 222
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+ AR +FD M R VSW+AMI GY + EAL +F M+ +G PDL
Sbjct: 223 ---------LLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDL 273
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T+L ++ C AL+ G Y G + ++CNALIDMYSKCG I ARE+F
Sbjct: 274 TTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 333
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ +VSW MI G ++G +EAL LFH ++ L L+P+ +TF+ +L +C+H+G + +G
Sbjct: 334 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 393
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
+F+ M++ + + P + H CM D+LGR G + EA F+++MP + D IW LL AC+
Sbjct: 394 RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 453
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
IH+NIE+GE V+ ++ L P S +V ++NIY+ GRWD A++R K +KK PG
Sbjct: 454 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 513
Query: 600 SLVHINGKTCTFTVED 615
S + ING F D
Sbjct: 514 SWIEINGIVHAFVGGD 529
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 198/435 (45%), Gaps = 42/435 (9%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L RL + ++ WN IR A+ L+ M + PN T+PF+ KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
L IH H SD+FV T +VD YAKC L A +LF M RDV +WNA
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MI G + G + + L M+ GI + T++G+
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGV------------------------ 216
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
C L A +F + G+R VSW+++IGG D ++L+
Sbjct: 217 --------------LPTCQCLLYARKIFDVM--GVRNEVSWSAMIGGYVASDCMKEALDI 260
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+R M G PD+TT++ +L +C AL G H + I GF D + N LI MYSK
Sbjct: 261 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSK 320
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG I AR +F+ M VSW AMI GY G EAL LF + A G PD +T + +
Sbjct: 321 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 380
Query: 366 ISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 423
+S C SG + G+ WFD + + + C ++D+ + G I +A +P E
Sbjct: 381 LSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 440
Query: 424 TVVSWTTMIAGCALN 438
V W+ +++ C ++
Sbjct: 441 DVRIWSALLSACRIH 455
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
L ++ C QS +L K + + V + L +Y C + AR LF +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+V+ W +I A NG F A+DL+H M+ L +RPN+ T+ VL+AC+ +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ K++ + ++ + + D + G L EA SM + D W ++ C ++
Sbjct: 132 HS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/595 (31%), Positives = 306/595 (51%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I N+ +A L+ M ++ ++P+++TF + + IH HI+
Sbjct: 111 WTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHII 170
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F + + V ++VD Y K LD A +LF +MP +D S+N MI G+ + GF E+ L
Sbjct: 171 RFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALK 230
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF MR + Q T + ++ ++ + + +H I D+ V N + Y+
Sbjct: 231 LFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYS 290
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + + +A+ +F + E VS+N II G + +++ S + ++ + F
Sbjct: 291 KHDYIDLAKNLFDEMPE--LDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPF 348
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LS L GR H+ + +V V N L+ MY+KC + A +F +
Sbjct: 349 ATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAY 408
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V WTA+IS Y QKG +EAL++F M D T S + ++ LGK
Sbjct: 409 RNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQL 468
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ GL +V + L+DMY+ CGS+ DA E+F +P++ +V W +I+ + NG+
Sbjct: 469 HSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDA 528
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
F M+E L P+ V+FL+VL AC+H G +EK YFN MT+VY+++P HY+
Sbjct: 529 EATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYAT 588
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-H 560
M D+L R G+ EA + + MP + D +W ++L +C+IH+N ++ + A +LF+++
Sbjct: 589 MIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALR 648
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
AA YV M+NIYA G+W+ A ++ M+ VKK S V I+ + FT D
Sbjct: 649 DAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTAND 703
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 222/487 (45%), Gaps = 16/487 (3%)
Query: 58 PFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDM----YAKCDRLDCAYKLFD 113
P I++ KL D + + I + F + T+ V+M Y K L A +LF+
Sbjct: 44 PEISRFNFKLKDLVRANQIAK--ARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFE 101
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
M R+ SW MI G++Q ++ L+ M G++ D +T L L
Sbjct: 102 SMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKE 161
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ +HS I G A + V N+ + +Y K L +A +F E + VS+N +I G
Sbjct: 162 VLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS--EMPTKDSVSFNVMITGY 219
Query: 234 T-YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
T YG + +++L + M F+P T ++L V E ++ G+ +H I + D
Sbjct: 220 TKYGFR-EEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWD 278
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ V N L+ YSK ID A+ LFD M + VS+ +I+GYA G +++ LF ++
Sbjct: 279 IFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQG 338
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
+M+S L +G+ A V V NAL+DMY+KC D
Sbjct: 339 TSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFED 398
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A +F L + V WT +I+ G EAL +F +M ++ ++ TF + L+A +
Sbjct: 399 ANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASAN 458
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI-- 530
+ G + + ++ ++ + S + D+ G +K+A++ + MP D I
Sbjct: 459 LASVSLGKQLHSSVIRLGLLSSVFSG-SVLVDMYANCGSMKDAIEVFKEMP---DRNIVC 514
Query: 531 WGTLLCA 537
W L+ A
Sbjct: 515 WNALISA 521
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 325/625 (52%), Gaps = 19/625 (3%)
Query: 7 PPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK 66
PP I + +I+ + I +D N K F K+++ E ++ +P + + C +
Sbjct: 26 PPTSFPIDKGQSISLQKTHISTHLDPNRNLKFQEAFSLAKESNEEVDSSFYPPLLQQCLE 85
Query: 67 LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
F +Q+IH HIVK+ D F+ + +V +YAKC R++CA ++FD M R+ +W +
Sbjct: 86 NCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNL 145
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
+ G+ Q + + LF M L +++ + L A L L + +H++ I
Sbjct: 146 MKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALN-ACTSLHSLKLGEQLHAYIIKY 204
Query: 185 GVDADVSVCNTWISAYAKCN-DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
VD D S+ N S Y KC L++ FR I+E + V+SW + I C + +
Sbjct: 205 HVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKE--KDVISWTAAISACGEKGEAMKGV 262
Query: 244 NFYRHMIYD--GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ M+ D +P+ T+ S LS C + L G VH+ G++ ++ V N+L+
Sbjct: 263 RVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLY 322
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-----------EALRLFFAM 350
+Y KCG I A+ LF GM D V+W AMI+G+AQ +L EAL LF +
Sbjct: 323 LYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKL 382
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+G PD T S++S C + ALE G+ G +V+V +++I+MY+KCGSI
Sbjct: 383 NRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSI 442
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A ++F + +T++ WTTMI G A +G +AL+LF M + +RPN VTF+ VL AC
Sbjct: 443 ERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSAC 502
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
AG + + + YF +M K Y++ P ++HY C+ D+L R G+++EA D ++ M K+ I
Sbjct: 503 GSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFI 562
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
W L+ C N+E+G A +L L+P Y + N Y GR+D V+ + +M+
Sbjct: 563 WSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMRE 622
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
++ + S + I + +F D
Sbjct: 623 EKIGELKDWSWISIKDRVYSFQTND 647
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 308/596 (51%), Gaps = 5/596 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTF--PFIAKACAKLSDFLYSQMI 76
I W + ++ V + +AL+LF M+ + + + T+ KAC + S+ Y + +
Sbjct: 59 IKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESL 118
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H + K+ S +FV + ++DMY + ++D + ++F +MP R+ +W A I G G
Sbjct: 119 HAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLH 178
Query: 137 EKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L F M R + +D +A + + + +H+ I G A + V N+
Sbjct: 179 YEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANS 238
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y +C +++ +F + E R VV W S+I + + ++N + M
Sbjct: 239 LATMYTECGEMQDGLRLFESMSE--RDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVS 296
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T S ++C LV G +H + G +SV N+++ MYS C +DSA L
Sbjct: 297 PNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVL 356
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F GM R +SW+ +I GY+Q +E + F M AG P + S++S G L
Sbjct: 357 FQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVL 416
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E G+ A GL+ N + +ALI+MYSKCGSI +A ++F +VS T MI G
Sbjct: 417 EQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGY 476
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G+ EA+DLF + ++L RP+ VTF++VL AC+H+G L+ G+ YFNLM + Y + P
Sbjct: 477 AEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPA 536
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
HY CM DLL R G+L +A + MP K D +W TLL ACK ++E G A R+
Sbjct: 537 KEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRIL 596
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
EL+P S V +ANI++ G W AN+R MK V K PG S + I + F
Sbjct: 597 ELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKEPGWSSILIKDQVSAF 652
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 191/416 (45%), Gaps = 8/416 (1%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL--VGIQADFVTVMGL 161
+L A ++FDKMP RD+ SW A++ G+ E+ L LF MR+ +G+ D +
Sbjct: 43 KLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSVA 102
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+A + +++ +S+H++ + + V V + + Y + + + VF E R
Sbjct: 103 LKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVF--AEMPFR 160
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
V+W + I G + + L ++ M + D L +C + GR +
Sbjct: 161 NSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREI 220
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+H I GF + V N+L +MY++CG++ LF+ M +R V WT++I+ Y + G
Sbjct: 221 HTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQE 280
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
++A+ F M + P+ T S + C L G+ S GL D++ V N++
Sbjct: 281 EKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSM 340
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+ MYS C + A LF + + ++SW+T+I G + E F M + +P
Sbjct: 341 MKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTD 400
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEA 515
++L LE+G L + + NP + S + ++ + G + EA
Sbjct: 401 FALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIR--SALINMYSKCGSIIEA 454
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLS 364
G + AR +FD M R SWTA++ GY +EAL LF AM + G D +
Sbjct: 42 GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+ CGQS + G+ YA L +V V +AL+DMY + G I + +F +P +
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRN 161
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWG-Y 482
V+WT I G G E L F QM L + F L+AC ++ G +
Sbjct: 162 SVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIH 221
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+++ K + L + +A + G++++ L +SM + D +W +L+ A
Sbjct: 222 THVIVKGFAAI--LWVANSLATMYTECGEMQDGLRLFESMS-ERDVVLWTSLITA 273
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/567 (32%), Positives = 302/567 (53%), Gaps = 1/567 (0%)
Query: 49 DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
DI P+ +AC + + +M+H ++ F S FV T+++ MYAK R+ +
Sbjct: 159 DIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDS 218
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
K+F+ + +R+ SWNAMI GF G + F M I+ + + +++A
Sbjct: 219 CKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQL 278
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ + ++ IG+ +++ V I +AKC + + VF G + WN+
Sbjct: 279 GDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNA 338
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+I G T ++++ + M + + DV T S L+S +L + +H G
Sbjct: 339 MISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG 398
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
+ VS+ N L+ Y+KCG++D+ R LFD + ++SWT +++ Y+Q + ++AL +F
Sbjct: 399 -SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFS 457
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M G P+ VT +++ C +LE G+ + C G + V + LIDMY+KCG
Sbjct: 458 QMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCG 517
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
S+ DA ++F +L + V+SWT MI+G A +G +AL+LF +M + PN TFL +L
Sbjct: 518 SVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLF 577
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC+H G +++G YF+LM + Y + PE+ HY+C+ D+LGR G+L EA F+ MPI+ D
Sbjct: 578 ACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDE 637
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM 588
+W TLL AC++H NI++ + A ++ P A V ++N Y G +G N+R MM
Sbjct: 638 KVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMM 697
Query: 589 KRNQVKKFPGQSLVHINGKTCTFTVED 615
K ++K G S + I GK F D
Sbjct: 698 KSQAMRKETGMSWICIGGKIHKFCSGD 724
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 222/476 (46%), Gaps = 22/476 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V +A F RM +I PN F ++KA +L D + I+
Sbjct: 233 WNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAF 292
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF--------DKMPDRDVASWNAMIVGFAQM 133
+ S+I V T ++DM+AKC + ++ +F +P WNAMI GF
Sbjct: 293 EIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLP------WNAMISGFTIS 346
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G E+ + LF M I+ D T + + L +K +H G VS+C
Sbjct: 347 GHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSLC 405
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N + AYAKC +L +F EE + +SW +++ + +++D+L+ + M G
Sbjct: 406 NALMDAYAKCGELDAMRKLFDTWEESNQ--ISWTTLVTAYSQSSEWEDALSVFSQMREMG 463
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F+P+ T +L+SC +L G+ VHS GF D V + LI MY+KCG + A
Sbjct: 464 FQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAI 523
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F+ + D +SWTAMISGYAQ G +AL LF ME P+ T L ++ C G
Sbjct: 524 KVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGG 583
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
++ G ++F GL + ++D+ + G + +A + +P E W+T+
Sbjct: 584 LVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTL 643
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC-THAGFLEKGWGYFNLM 486
+ C ++G ++ + Q + L P+ L +L AG +E G N+M
Sbjct: 644 LGACRVHGN-IQLAKIAAQKV-LSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMM 697
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 211/454 (46%), Gaps = 8/454 (1%)
Query: 73 SQMIHGHIVKSPFW--SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++ IHG ++K S + +V Y+KC A ++FD++P + V SW ++VG
Sbjct: 80 AKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGA 139
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ GF + F + I D + QA I + + + VH+ I G +
Sbjct: 140 TENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRT 199
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V + + YAK + + VF +E R VSWN++I G + ++ N + M+
Sbjct: 200 FVNTSLLGMYAKLGRIGDSCKVFNSLEN--RNQVSWNAMISGFVSNGLYAEAYNSFLRML 257
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ RP+V +S+ + + +GR ++ G ++ V LI M++KCG +
Sbjct: 258 GEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVT 317
Query: 311 SARFLFDGMCDRTRVS--WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ +F V+ W AMISG+ G +EA+ LF M D+ T S ++
Sbjct: 318 ESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNS 377
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
+LE K G V +CNAL+D Y+KCG + R+LF E +SW
Sbjct: 378 IADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISW 436
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
TT++ + + E+ +AL +F QM E+ +PN+VTF VL +C LE G +L K
Sbjct: 437 TTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCK 496
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
+ S + D+ + G +++A+ +S+
Sbjct: 497 TGFARDKCVE-SVLIDMYAKCGSVRDAIKVFESL 529
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 169/326 (51%), Gaps = 6/326 (1%)
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSV-CNTWISAYAKCNDLKMAELVF 213
+++ L + + + L KS+H F I ++ ++V N + AY+KC+D A VF
Sbjct: 62 TSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVF 121
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
I + ++V SW ++ G T + D ++++ ++ PD + + + +C+ ++
Sbjct: 122 DEIPQ--KSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDS 179
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
+V G +VH+ I GF V +L+ MY+K G I + +F+ + +R +VSW AMISG
Sbjct: 180 IVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISG 239
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
+ G EA F M P++ +S+ GQ G +E G++ + A G++ N
Sbjct: 240 FVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSN 299
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVS--WTTMIAGCALNGEFVEALDLFHQM 451
+ V ALIDM++KCG + ++ +F + V+ W MI+G ++G EA+ LF +M
Sbjct: 300 IHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRM 359
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLE 477
+ +++ + T+ + L + LE
Sbjct: 360 CQNNIKRDVYTYCSTLNSIADMRSLE 385
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 5/260 (1%)
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDIDSARFL 315
T+++ L+ L + + +H I + L V ++N L+ YSKC D SAR +
Sbjct: 62 TSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTV-MLNQLVIAYSKCSDFGSARQV 120
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + ++ SWT ++ G + G + + F + VPD + + I C ++
Sbjct: 121 FDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSI 180
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+G+ + G V +L+ MY+K G IGD+ ++F +L + VSW MI+G
Sbjct: 181 VVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGF 240
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
NG + EA + F +M+ ++RPN F++V +A G +EKG Y N + +
Sbjct: 241 VSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKG-RYINRIAFEIGMQSN 299
Query: 496 LNHYSCMADLLGRKGKLKEA 515
++ + + D+ + G + E+
Sbjct: 300 IHVGTALIDMFAKCGCVTES 319
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+L + S W + + +E AL +F +M++ +PN +TF + +CA L
Sbjct: 423 KLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLC 482
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
Y Q +H K+ F D V++ ++DMYAKC + A K+F+ + D DV SW AMI
Sbjct: 483 SLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMIS 542
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G+AQ G + L LF M LV + T + L A H
Sbjct: 543 GYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHG 582
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 297/550 (54%), Gaps = 25/550 (4%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C ++ ++ +H H +K+ F SD V T +VD+YAK D L A + F +P+ V +
Sbjct: 255 CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETC 314
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NAM+VG + G + + LF M GI V++ G+ A K
Sbjct: 315 NAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVK-------------- 360
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G D DV V N + Y KC L A LVF+ +E+ R VSWN+II + ++D++
Sbjct: 361 -GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ--RDSVSWNTIIAALEQNECYEDTI 417
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
M+ G D T S+L +C ++L G +VH I G LD V +T++ MY
Sbjct: 418 VHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMY 477
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
KCG I A L D + + VSW ++I+G++ +EA + F M G PD T
Sbjct: 478 CKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYA 537
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+++ C +ELGK + + + + L+DMY+KCG++ D++ +F + +
Sbjct: 538 TVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKL 597
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
VSW MI G AL+G+ EAL++F + + ++ PN TF+AVL+AC+H G L+ G YF
Sbjct: 598 DFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYF 657
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
+LMT Y++ P+L H++CM +EAL F++SMP+++DA IW TLL CKI ++
Sbjct: 658 HLMTSRYKLEPQLEHFACMGP--------QEALKFIRSMPLEADAVIWKTLLSICKIRQD 709
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+E+ E A + L+P ++ Y+ ++N+YA G+W V+ R +M++ ++KK PG S +
Sbjct: 710 VEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIE 769
Query: 604 INGKTCTFTV 613
+ + F V
Sbjct: 770 VQSEMHGFLV 779
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/586 (23%), Positives = 233/586 (39%), Gaps = 104/586 (17%)
Query: 56 TFPFIAKACAKL--SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD 113
TF + + CA S Q H ++ S F +FV ++ MYA+C A+ +FD
Sbjct: 31 TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90
Query: 114 KMPDRDVASWNAMIVGFAQM---GFLEKVLC----------------------------L 142
MP RD SWN M+ +A M G +LC L
Sbjct: 91 TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
M G+ D T+ L +A L+L +H+ + G++ DV + + Y K
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGK 210
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL----------------NFY 246
C L+ A F G+ E R VSW ++I GC +++ L +
Sbjct: 211 CRSLEDALHFFHGMGE--RNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLH 268
Query: 247 RHMIYDGFRPDVTT-----------------------------------VVSLLSSCVCP 271
H I + F D +V L+ + +
Sbjct: 269 AHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGA 328
Query: 272 EALVQGRLVHSHGIHYG----------------FDLDVSVINTLISMYSKCGDIDSARFL 315
EA+ + + GI +G FD+DV V N ++ +Y KC + A +
Sbjct: 329 EAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLV 388
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F M R VSW +I+ Q ++ + M +G D T S++ C +L
Sbjct: 389 FQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSL 448
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E G A GL + V + ++DMY KCG I +A +L + + +VSW ++IAG
Sbjct: 449 EYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGF 508
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+LN + EA F +M+++ ++P+ T+ VL +C + +E G + K + E
Sbjct: 509 SLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDE 568
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
S + D+ + G + ++ + + K D W ++C +H
Sbjct: 569 FIS-STLVDMYAKCGNMPDSQLMFEKVQ-KLDFVSWNAMICGYALH 612
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 199/449 (44%), Gaps = 27/449 (6%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ N+ + V +A+ LF+ M ++ I ++ + ACA++ F
Sbjct: 310 TVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDV----- 364
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
D+ V+ ++D+Y KC L AY +F +M RD SWN +I Q E
Sbjct: 365 ----------DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYE 414
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ M G++AD T + +A + L VH I G+ D V +T +
Sbjct: 415 DTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVV 474
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + A + I G + +VSWNSII G + + +++ F+ M+ G +PD
Sbjct: 475 DMYCKCGMITEALKLHDRI--GGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPD 532
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L SC + G+ +H I D + +TL+ MY+KCG++ ++ +F+
Sbjct: 533 HFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFE 592
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ VSW AMI GYA G EAL +F + A P+ T ++++ C G L+
Sbjct: 593 KVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDD 652
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G ++F L+ + + C +A + ++P E V W T+++ C
Sbjct: 653 GCRYFHLMTSRYKLEPQL--------EHFACMGPQEALKFIRSMPLEADAVIWKTLLSIC 704
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+ + A ++ LD + V L
Sbjct: 705 KIRQDVEVAETAASNVLRLDPDDSSVYIL 733
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/604 (33%), Positives = 328/604 (54%), Gaps = 87/604 (14%)
Query: 41 LFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
LF+ M ++ +I+PN + + K+ S + H++KS + D +V+ ++ +Y
Sbjct: 90 LFKHMLRHCNIKPNTSFYSVMMKSAGS-----ESMLFLAHVLKSGYDRDHYVRNGILGIY 144
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
AK ++ A KLFD+MPDR VA WN MI G+ + G E+ LF+ VM
Sbjct: 145 AKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH-------------VM 191
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
G + + +V T I+ +AK +LK A + F + E
Sbjct: 192 GDQE----------------------ISRNVITWTTMITGHAKKGNLKTARMYFDKMPE- 228
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVC------PE 272
R+VVSWN+++ G G ++++ + M+ G +PD TT V+++SSC E
Sbjct: 229 -RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSE 287
Query: 273 ALVQ-------------------------GRLVHSHGIH-----YGFDLDVSVINTLISM 302
++V+ G L +H I Y + V N +IS
Sbjct: 288 SIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVP-WNAMISA 346
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVT 361
Y++ GD+ SAR LFD M R VSW +MI+GY Q G+ +A++LF M ++ + PD VT
Sbjct: 347 YARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVT 406
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++S+ S CG G L LG W + ++ ++ V N+LI MYS+CGS+ DA +F +
Sbjct: 407 MVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMA 466
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ +VS+ T+I+G A +G +E+++L +M E + P+R+T++A+L AC+HAG L +G
Sbjct: 467 TRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQR 526
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
F + P+++HY+CM D+LGR G+L+EA+ +QSMP++ AGI+G+LL A IH
Sbjct: 527 LFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIH 581
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+ +E+GE A +LF++EPH++ YV ++NIYA GRW +R M++ VKK G S
Sbjct: 582 KQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSW 641
Query: 602 VHIN 605
+ N
Sbjct: 642 LEHN 645
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLS 68
+K+ + T++ WNS I E+ KA+ LF M D +P+ +T + AC L
Sbjct: 360 FDKMPQRDTVS-WNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLG 418
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + ++ I V +++ MY++C + A +F +M RD+ S+N +I
Sbjct: 419 ELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLIS 478
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
GFA+ G + + L M+ GI+ D +T + + A HA
Sbjct: 479 GFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHA 518
>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 726
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 331/602 (54%), Gaps = 18/602 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL-SDFLYSQMIHGHI 80
WN +R +D +ALLL+++M+++ ++ + TFP I +A L SD L +M+H
Sbjct: 96 WNLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDA 155
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K F D++ TM+++YA+C + +FD+M RD+ SW +MI G+ G +
Sbjct: 156 MKLGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAF 215
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF MRL ++ + VT++ + + + S + +H + I G+ SV N+ + Y
Sbjct: 216 ELFNKMRL-EMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMY 274
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+ K E +F +E R V+SWN++IG ++ + + M R +V
Sbjct: 275 SITGSAKEVESLF--VEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQM-----RGEVAL 327
Query: 261 VVSLLSSCVCPEA----LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
L+ + A LV+G +HS I G DV ++ +L+ Y+KCG++ ++ LF
Sbjct: 328 SSETLTLVISVFAKIGNLVEGEKLHSFSIKVGLCDDV-LLASLLDFYAKCGELRNSVQLF 386
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ R+ +W M+SG Q G DEA+ LF M+A+G + S++ C G+L+
Sbjct: 387 GEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQ 446
Query: 377 LGKWFDNYACSGGL----KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L K Y DN+ + ++++MY +CGSI ARE F + K ++WT+MI
Sbjct: 447 LCKEIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMI 506
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
G ++G +EAL LF+QM+ + PNRVTFL++L AC+H+G + +G F M V+ +
Sbjct: 507 EGYGIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGM 566
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P+L+HY+CM DLLGR GK+KEAL + M + +D+ IWG L+ +C++H + ++GE+ A
Sbjct: 567 EPDLDHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQ 626
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
RL E+E + Y ++NI A+ G+WD V +R ++ ++K PG S + G+ F
Sbjct: 627 RLLEMESDNVGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCIVGKGRNYCFI 686
Query: 613 VE 614
E
Sbjct: 687 SE 688
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 226/475 (47%), Gaps = 14/475 (2%)
Query: 74 QMIHGHIVKSPFWSDI--FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH ++ S +++ F T ++ Y+K + L+ A +F + + + SWN ++
Sbjct: 45 KQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHL 104
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHIGVDADV 190
G + + L L+ MR G++ D T + +A + K LL K VH + +G D+
Sbjct: 105 DFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLGFGYDL 164
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
CNT I YA+C + ++F E R +VSW S+I G + + M
Sbjct: 165 YFCNTMIEVYARCGCVYYGRVMFD--EMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMR 222
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ P+ T++ +L C + +GR +H + I G + SV N+++ MYS G
Sbjct: 223 LE-MEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAK 281
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM-ISGC 369
LF + R +SW +I YA +GD +E + F M GEV L++ IS
Sbjct: 282 EVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMR--GEVALSSETLTLVISVF 339
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ G L G+ +++ GL D+V++ +L+D Y+KCG + ++ +LF +P ++ +W
Sbjct: 340 AKIGNLVEGEKLHSFSIKVGLCDDVLLA-SLLDFYAKCGELRNSVQLFGEIPCRSSSTWK 398
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
M++GC NG F EA+ LF QM ++ +++ AC+H G L+ +T+
Sbjct: 399 LMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRN 458
Query: 490 YQVNPELNHYSCMADLLG---RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ E ++ +L R G + A ++ M K D W +++ IH
Sbjct: 459 FFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAK-DNITWTSMIEGYGIH 512
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 198/615 (32%), Positives = 326/615 (53%), Gaps = 6/615 (0%)
Query: 1 MAASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFI 60
+ A L R+N+ R+ ++ WNS I + +AL LFR M+K + N T
Sbjct: 62 LGARKLFDRMNE--RNDVVS-WNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAA 118
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
+AC S IH I+KS D++V +V M+ + ++ A ++FD++ ++D
Sbjct: 119 LQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDN 178
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
+WN+MI GF Q G + L F ++ ++ D V+++ + A+ +L K +H++
Sbjct: 179 ITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY 238
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ +D+++ + NT I Y+KC + A LVF + + ++SW ++I +
Sbjct: 239 AMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMIN--KDLISWTTVIAAYAQNNCHT 296
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++L R + G D + S L +C L + VH + + G D+ + N +I
Sbjct: 297 EALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMII 355
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
+Y+ CG+I+ A +F+ + + VSWT+MIS Y G +EAL +F+ M+ PD +
Sbjct: 356 DVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSI 415
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++S++S AL GK + G N+L+DMY+ CGS+ +A ++F
Sbjct: 416 TLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICT 475
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
K++V WTTMI ++G A++LF M + L P+ +TFLA+L AC+H+G + +G
Sbjct: 476 RSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGK 535
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
M YQ+ P HY+C+ DLLGR L+EA FV+SM I+ A +W L AC+I
Sbjct: 536 RLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRI 595
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H N ++GE A +L +L+P S YV ++N++A GRW V +R MK +KK PG S
Sbjct: 596 HSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCS 655
Query: 601 LVHINGKTCTFTVED 615
+ + K TF V D
Sbjct: 656 WIEVGNKVHTFLVRD 670
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/460 (31%), Positives = 241/460 (52%), Gaps = 10/460 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
++ TFP + KAC + D IHG I+K + S +FV ++V MYAKC+ + A KLF
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68
Query: 113 DKMPDR-DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
D+M +R DV SWN++I ++ G + L LF M+ G+ A+ T++ QA +
Sbjct: 69 DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFK 128
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
L +H+ + DV V N ++ + + + A +F ++E + ++WNS+I
Sbjct: 129 KLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDE--KDNITWNSMIA 186
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G T ++++L F+ + +PD +++S+L++ L+ G+ +H++ + D
Sbjct: 187 GFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDS 246
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
++ + NTLI MYSKC + A +FD M ++ +SWT +I+ YAQ EAL+L ++
Sbjct: 247 NLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQ 306
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G D + + S + C L K Y GL D +M+ N +ID+Y+ CG+I
Sbjct: 307 TKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSD-LMMQNMIIDVYADCGNIN 365
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A +F ++ K VVSWT+MI+ NG EAL +F+ M E + P+ +T +++L A
Sbjct: 366 YATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAA 425
Query: 472 HAGFLEKG---WGYF---NLMTKVYQVNPELNHYSCMADL 505
L KG G+ M + VN ++ Y+C L
Sbjct: 426 SLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSL 465
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 169/326 (51%), Gaps = 1/326 (0%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
MR++G+ D T + +A + + +H I G D+ V V N+ +S YAKCND
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+ A +F + E VVSWNSII + + ++L +R M G + T+V+ L
Sbjct: 61 ILGARKLFDRMNE-RNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAAL 119
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
+C G +H+ + LDV V N L++M+ + G + A +FD + ++ +
Sbjct: 120 QACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNI 179
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
+W +MI+G+ Q G +EAL+ F ++ A PD V+++S+++ G+ G L GK YA
Sbjct: 180 TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYA 239
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
L N+ + N LIDMYSKC + A +F + K ++SWTT+IA A N EAL
Sbjct: 240 MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEAL 299
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACT 471
L ++ + + + + L AC+
Sbjct: 300 KLLRKVQTKGMDVDTMMIGSTLLACS 325
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 323/614 (52%), Gaps = 32/614 (5%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
P L + I WN+ I D + KAL LF +M ++++ + +T +ACA+L
Sbjct: 216 PLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAEL 275
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ IH +K F D+++ +++MY+ L+ +++LF+ +P+RD WN+MI
Sbjct: 276 GSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMI 335
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTV-MGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+A G E+ + LF M+ G++ D TV + L+ A L KS+H+ I G+
Sbjct: 336 SAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGM 395
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVF---RGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
D S+ N +S Y + N ++ + +F +G++ ++SWN++I +
Sbjct: 396 RIDASLGNALLSMYTELNCVESVQKIFDRMKGVD-----IISWNTMILALARNTLRAQAC 450
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ M +P+ T++S+L++C L GR +H + + + +++ + L MY
Sbjct: 451 ELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMY 510
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
CGD +AR LF+G DR +SW AMI P+ VT++
Sbjct: 511 MNCGDEATARDLFEGCPDRDLISWNAMIXKAE---------------------PNSVTII 549
Query: 364 SMISGCGQSGALELGKWFDNYACSGG--LKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++S L G+ Y G L ++ + NA I MY++CGS+ A +F LP
Sbjct: 550 NVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 609
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ ++SW MIAG +NG +A+ F QM+E RPN VTF++VL AC+H+GF+E G
Sbjct: 610 KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 669
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
F+ M + + V PEL HYSC+ DLL R G + EA +F+ SMPI+ DA +W LL +C+ +
Sbjct: 670 LFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAY 729
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+ + + + +L +LEP +A YV ++N+YA G W V +RT +K ++K PG S
Sbjct: 730 SDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISW 789
Query: 602 VHINGKTCTFTVED 615
+ + + F+ D
Sbjct: 790 IIVKNQVHCFSAGD 803
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/510 (30%), Positives = 257/510 (50%), Gaps = 16/510 (3%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I+ + L + +M+ + PNN T P + KACA + + IH I
Sbjct: 27 HWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSI 86
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ D+ V T +VD Y KC ++ A +FD M DRDV WNAM+ G+ G E+ +
Sbjct: 87 QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAM 146
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISA 199
L M ++ + T++ L A A L L + VH + + G+ D++ V I
Sbjct: 147 LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGF 206
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y + D+++ L+F + +R +VSWN++I G GD F +L + M+ D + D
Sbjct: 207 YLRF-DMRVLPLLFDLMV--VRNIVSWNAMISGYYDVGDYF-KALELFVQMLVDEVKFDC 262
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T++ + +C +L G+ +H I + F D+ ++N L++MYS G ++S+ LF+
Sbjct: 263 VTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFES 322
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ--SGALE 376
+ +R W +MIS YA G +EA+ LF M++ G D TV+ M+S C + SG L+
Sbjct: 323 VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK 382
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK + G++ + + NAL+ MY++ + +++F + ++SW TMI A
Sbjct: 383 -GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALA 441
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---WGYFNLMTKVYQVN 493
N +A +LF +M E +++PN T +++L AC L+ G GY +M ++N
Sbjct: 442 RNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGY--VMKHSIEIN 499
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMP 523
L + +AD+ G A D + P
Sbjct: 500 QPLR--TALADMYMNCGDEATARDLFEGCP 527
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 316/637 (49%), Gaps = 82/637 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + K E KAL MK + ++P+ +T
Sbjct: 259 WNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT------------------------- 293
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-----DRDVASWNAMIVGFAQMGFL 136
W+ I + YA+ + + A K F +M +V SW A+I G Q G+
Sbjct: 294 ----WNAI------ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNT 195
+ L +F M L G++ + +T+ A + L + +H + I + +D+D+ V N+
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 196 WISAYAKCNDLKMA------------------------------------ELVFRGIEEG 219
+ YAKC +++A E+ F+GIE
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP- 462
Query: 220 LRTVVSWNSIIGGCT-YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
+++WN ++ G T YGD +L F++ M G P+ TT+ L++C L G+
Sbjct: 463 --DIITWNGLVTGFTQYGDG-KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGK 519
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H + + +L V + LISMYS C ++ A +F + R V W ++IS AQ G
Sbjct: 520 EIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG 579
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
AL L M + + VT++S + C + AL GK + GL + N
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LIDMY +CGSI +R +F +P++ +VSW MI+ ++G ++A++LF Q + L+P
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKP 699
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N +TF +L AC+H+G +E+GW YF +M Y ++P + Y+CM DLL R G+ E L+F
Sbjct: 700 NHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF 759
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
++ MP + +A +WG+LL AC+IH N ++ EY A LFELEP S+ YV MANIY+ GRW
Sbjct: 760 IEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRW 819
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ A +R +MK V K PG S + + K +F V D
Sbjct: 820 EDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGD 856
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 253/548 (46%), Gaps = 82/548 (14%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+ + LF M + P++ FP + KAC++L ++ + ++ +++ F + V+ ++
Sbjct: 172 EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSI 231
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+DM+ KC R+D A + F+++ +DV WN M+ G+ G +K L +M+L G++ D
Sbjct: 232 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQ 291
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF-- 213
VT N IS YA+ + A F
Sbjct: 292 VT-----------------------------------WNAIISGYAQSGQFEEASKYFLE 316
Query: 214 -RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
G+++ VVSW ++I G ++L+ +R M+ +G +P+ T+ S +S+C
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376
Query: 273 ALVQGRLVHSHGIHY-GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR-VSWTAM 330
L GR +H + I D D+ V N+L+ Y+KC ++ AR F GM +T VSW AM
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAM 435
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG---------------------- 368
++GYA +G +EA+ L M+ G PD++T +++G
Sbjct: 436 LAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGM 495
Query: 369 -------------CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
CGQ L+LGK Y ++ + V +ALI MYS C S+ A
Sbjct: 496 DPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACS 555
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F L + VV W ++I+ CA +G V ALDL +M ++ N VT ++ L AC+
Sbjct: 556 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 615
Query: 476 LEKGWGYFNLMTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
L +G + + + N LN + D+ GR G ++++ MP + D W
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFILNS---LIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNV 671
Query: 534 LLCACKIH 541
++ +H
Sbjct: 672 MISVYGMH 679
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 2/272 (0%)
Query: 256 PD--VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD + S+L C L G VH+ + G D+ + + L+ +Y + G ++ AR
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD M +R SWTA++ Y GD +E ++LF+ M G PD + C +
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 204
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+GK +Y S G + N V +++DM+ KCG + AR F + K V W M++
Sbjct: 205 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVS 264
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G GEF +AL M ++P++VT+ A++ +G E+ YF M +
Sbjct: 265 GYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFK 324
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
P + ++ + + G EAL + M ++
Sbjct: 325 PNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 320/608 (52%), Gaps = 23/608 (3%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKN---DIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
WN+ + D + L LFR ++ P+ T + CA L+ + +H
Sbjct: 132 SWNALMAAVADPR---RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVH 188
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRL---DCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
G VKS + + V +VDMYAKC + +CA+ R+V SWN M+ G+A+ G
Sbjct: 189 GLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNG 248
Query: 135 FLEKVLCLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----GIHIGVDA 188
L M++ G+ AD +T++ + L+ L+ +H+F G+H+ D
Sbjct: 249 EAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDM 308
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
V N I+AY +C L A VF GI + V SWN++IG + ++ +R
Sbjct: 309 ---VPNALIAAYGRCGCLLHACRVFDGICS--KMVSSWNALIGAHAQNGEASAAIELFRE 363
Query: 249 MIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G +PD ++ SLL +C + L+ G+ H + G + D + +L+S+Y +CG
Sbjct: 364 MTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCG 423
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA--AGEVPDLVTVLSM 365
AR LFD + ++ VSW MI+GY+Q G E+L+LF M++ G P L+ S
Sbjct: 424 RESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSA 483
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ C + A+ LGK +A L ++ + +++IDMYSKCGS+ DAR F L K
Sbjct: 484 LVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDA 543
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSWT MI G A+NG EA+ L+ +M + P+ T+L +L AC HAG LE G +F
Sbjct: 544 VSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQE 603
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M + ++ +L HY+C+ +L R G+ +A+ ++ MP + DA I ++L AC +H +E
Sbjct: 604 MRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVE 663
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+G+ VA +L ELEPH A YV +N+YA +WD + +R M++ V K PG S + I
Sbjct: 664 LGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIA 723
Query: 606 GKTCTFTV 613
GK +F
Sbjct: 724 GKVYSFVA 731
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 217/450 (48%), Gaps = 24/450 (5%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLYS 73
++++ QWN + + AL + R+ + + P+ T P K+C + D
Sbjct: 27 AASLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSC-RGDD---G 82
Query: 74 QMIHGHIVKSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H K D FV ++V MY +C R+D A K+F+ M R++ SWNA++ A
Sbjct: 83 RQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD 142
Query: 133 MGFLEKVLCLFYNM--RLVGI----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+ L LF + L G +A VTV+ + A + ++VH + G
Sbjct: 143 P---RRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPE---TGRAVHGLAVKSGW 196
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLNF 245
DA V N + YAKC ++ AE F G R VVSWN ++GG + +
Sbjct: 197 DAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGL 256
Query: 246 YRHMIYD--GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI-NTLISM 302
R M + G D T++S+L C L + R +H+ + G L ++ N LI+
Sbjct: 257 LREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAA 316
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVT 361
Y +CG + A +FDG+C + SW A+I +AQ G+ A+ LF M A G+ PD +
Sbjct: 317 YGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFS 376
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ S++ CG L GK + GL+ + + +L+ +Y +CG AR LF A+
Sbjct: 377 IGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVE 436
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
EK VSW TMIAG + NG E+L LF +M
Sbjct: 437 EKDEVSWNTMIAGYSQNGLPGESLQLFREM 466
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 123/261 (47%), Gaps = 18/261 (6%)
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMI--YDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
++ WN ++ + + D+L ++ DG PD T+ L SC + GR
Sbjct: 29 SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQ 84
Query: 280 VHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH+ G D D V N+L+SMY +CG +D A +F+GM R VSW A+++ A
Sbjct: 85 VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA--- 141
Query: 339 DLDEALRLFF-AMEAAG--EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
D L LF +E G PD T+++++ C E G+ A G
Sbjct: 142 DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201
Query: 396 VCNALIDMYSKCGSIGDARELFYALPE---KTVVSWTTMIAGCALNGEFVEALDLFH--Q 450
V N L+DMY+KCG + DA F P + VVSW M+ G A NGE A L Q
Sbjct: 202 VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ 261
Query: 451 MMELDLRPNRVTFLAVLQACT 471
M E + + +T L+VL C+
Sbjct: 262 MEERGVPADEITMLSVLPVCS 282
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 318/606 (52%), Gaps = 18/606 (2%)
Query: 11 NKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF 70
N + + N++N Q+ E LF M+ P+ T + A A
Sbjct: 172 NSLLTGYSWNRFNDQVWE------------LFCLMQVEGYRPDYYTVSTVIAALANQGAV 219
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
IH +VK F ++ V +++ M +K L A +FD M ++D SWN+MI G
Sbjct: 220 AIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGH 279
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
G + F NM+L G + T + ++ K L L++ +H + G+ +
Sbjct: 280 VINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQ 339
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+V + A KC ++ A +F + G+++VVSW ++I G D ++N + M
Sbjct: 340 NVLTALMVALTKCKEIDDAFSLF-SLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMR 398
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G +P+ T ++L+ + V +H+ I ++ SV L+ + K G+I
Sbjct: 399 REGVKPNHFTYSTILTV----QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNIS 454
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC- 369
A +F+ + + ++W+AM++GYAQ G+ +EA ++F + G P+ T S+I+ C
Sbjct: 455 DAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACT 514
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ ++E GK F YA L + + V ++L+ +Y+K G+I A E+F E+ +VSW
Sbjct: 515 APTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWN 574
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+MI+G A +G+ +AL++F +M + +L + +TF+ V+ AC HAG + KG YFN+M
Sbjct: 575 SMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMIND 634
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ +NP + HYSCM DL R G L +A+D + MP A +W +L A ++HRNIE+G+
Sbjct: 635 HHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKL 694
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A ++ LEP +A YV ++NIYA G W N+R +M + +VKK PG S + + KT
Sbjct: 695 AAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTY 754
Query: 610 TFTVED 615
+F D
Sbjct: 755 SFLAGD 760
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 268/534 (50%), Gaps = 18/534 (3%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
++ +AL LF + ++ + P++ T + CA + + +H VK + V
Sbjct: 81 DQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVG 140
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
++VDMY K + ++FD+M DRDV SWN+++ G++ F ++V LF M++ G +
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D+ TV + A + +++ +H+ + +G + + VCN+ IS +K L+ A +V
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F +E + VSWNS+I G + ++ + +M G +P T S++ SC +
Sbjct: 261 FDNMEN--KDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLK 318
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVSWTAMI 331
L R++H + G + +V+ L+ +KC +ID A LF M ++ VSWTAMI
Sbjct: 319 ELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMI 378
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF--DNYACSGG 389
SGY Q GD D+A+ LF M G P+ T ++++ E+ NY S
Sbjct: 379 SGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSS 438
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
V AL+D + K G+I DA ++F + K V++W+ M+AG A GE EA +FH
Sbjct: 439 ------VGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFH 492
Query: 450 QMMELDLRPNRVTFLAVLQACTH-AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
Q+ ++PN TF +++ ACT +E+G + K+ ++N L S + L +
Sbjct: 493 QLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKL-RLNNALCVSSSLVTLYAK 551
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH----RNIEIGEYVAYRLFELE 558
+G ++ A + + + D W +++ H + +E+ E + R E++
Sbjct: 552 RGNIESAHEIFKRQK-ERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVD 604
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 216/432 (50%), Gaps = 15/432 (3%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A +LFD+ P RD+ N ++ +++ ++ L LF ++ G+ D T+ +
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + ++ + VH + G+ +SV N+ + Y K +++ VF E G R VVSWN
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFD--EMGDRDVVSWN 172
Query: 228 SIIGGCTYGDKFDDSL-NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
S++ G ++ ++F+D + + M +G+RPD TV +++++ A+ G +H+ +
Sbjct: 173 SLLTGYSW-NRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVK 231
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
GF+ + V N+LISM SK G + AR +FD M ++ VSW +MI+G+ G EA
Sbjct: 232 LGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFET 291
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
F M+ AG P T S+I C L L + GL N V AL+ +K
Sbjct: 292 FNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTK 351
Query: 407 CGSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
C I DA LF + ++VVSWT MI+G NG+ +A++LF M ++PN T+
Sbjct: 352 CKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYST 411
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMP 523
+L HA F+ + + +V + N E + + + D + G + +A+ + +
Sbjct: 412 IL-TVQHAVFISE------IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIE 464
Query: 524 IKSDAGIWGTLL 535
K D W +L
Sbjct: 465 TK-DVIAWSAML 475
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 2/267 (0%)
Query: 204 NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
+D + A+ +F + LR + N ++ + D+ ++L+ + + G PD T+
Sbjct: 50 SDPRFAQQLFD--QTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSC 107
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+LS C G VH + G +SV N+L+ MY+K G++ R +FD M DR
Sbjct: 108 VLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRD 167
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
VSW ++++GY+ D+ LF M+ G PD TV ++I+ GA+ +G
Sbjct: 168 VVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHA 227
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
G + +VCN+LI M SK G + DAR +F + K VSW +MIAG +NG+ +E
Sbjct: 228 LVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLE 287
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQAC 470
A + F+ M +P TF +V+++C
Sbjct: 288 AFETFNNMQLAGAKPTHATFASVIKSC 314
>gi|115484979|ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|62734753|gb|AAX96862.1| Similar to selenium-binding protein [Oryza sativa Japonica Group]
gi|77549625|gb|ABA92422.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|125597201|gb|EAZ36981.1| hypothetical protein OsJ_21321 [Oryza sativa Japonica Group]
Length = 582
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 187/501 (37%), Positives = 275/501 (54%), Gaps = 4/501 (0%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQ-MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
L A ++FD P RD WN ++ A L L+ MR G+ D T +
Sbjct: 72 LAYARRVFDAAPSRDAYMWNTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLP 131
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A A+ L ++ H + + D V + IS Y++ +++ AE VF ++ RTV
Sbjct: 132 ACAAARAPRLGRAAHGDAVRFALARDGFVSSALISMYSQEGEVRDAERVFAERDDA-RTV 190
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSW +++ G F +++ + M+ G P+ T++S L E L G +VH
Sbjct: 191 VSWTAMVAGYAQNCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGF 250
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ GFD +V ++N LI+MY +CG AR LF+GM RT VSW M++ Y Q GD +A
Sbjct: 251 VVKLGFDANVPMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQA 310
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
++ F M D VT++S++S C +SGAL GKW A S GL + + N L+DM
Sbjct: 311 IKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNVLVDM 370
Query: 404 YSKCGSIGDARELFYA--LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
Y+KCG I A+E+F++ L +VVSW+ MI A +GE EAL LF M +RPN
Sbjct: 371 YAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSF 430
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TF AVL AC H+G +++G +FN + YQ++P L HY+CM D+LGR G+L EA ++
Sbjct: 431 TFTAVLMACCHSGLVDEGLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRG 490
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MPI+ D +WG L C++H +E+ EYVA LF+ + YV MAN+Y G +
Sbjct: 491 MPIRPDKCVWGAFLGGCRLHGMVELAEYVAKELFDSGSNDVTFYVLMANMYFEAGMLEDA 550
Query: 582 ANLRTMMKRNQVKKFPGQSLV 602
+R +MK ++KK G SLV
Sbjct: 551 ERIRGVMKEMELKKTAGHSLV 571
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 239/470 (50%), Gaps = 25/470 (5%)
Query: 22 WNSQIR-EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ +R A + A AL L+ RM+ + P++ T+P + ACA + HG
Sbjct: 90 WNTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDA 149
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKV 139
V+ D FV + ++ MY++ + A ++F + D R V SW AM+ G+AQ F +
Sbjct: 150 VRFALARDGFVSSALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEA 209
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF +M G+ + +T++ + L + + VH F + +G DA+V + N I+
Sbjct: 210 VTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITM 269
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y +C +A ++F G+ RT+VSWN+++ ++ F+R M+ + D
Sbjct: 270 YGRCGSAPVARVLFNGMSS--RTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCV 327
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF--D 317
T+VS+LS+C AL G+ VH +G D D + N L+ MY+KCG+I A+ +F
Sbjct: 328 TLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSH 387
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
G+ + VSW+AMI+ YA G+ +EAL+LF M G P+ T +++ C SG ++
Sbjct: 388 GLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDE 447
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIA 433
G K F++ A + + ++DM + G + +A + + P+K V W +
Sbjct: 448 GLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCV--WGAFLG 505
Query: 434 GCALNG--EFVE--ALDLFHQMMELDLRPNRVTFLAVLQACTH--AGFLE 477
GC L+G E E A +LF D N VTF VL A + AG LE
Sbjct: 506 GCRLHGMVELAEYVAKELF------DSGSNDVTFY-VLMANMYFEAGMLE 548
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 187/384 (48%), Gaps = 11/384 (2%)
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+H+ + +G+ A+ + + I+A A L A VF R WN+++ +
Sbjct: 44 IHARAVVLGISANPAFATSLITAVAPAC-LAYARRVFDAAPS--RDAYMWNTLLRAHAHS 100
Query: 237 DKF-DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
D+L Y M G PD T +L +C A GR H + + D V
Sbjct: 101 RAHARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALARDGFV 160
Query: 296 INTLISMYSKCGDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
+ LISMYS+ G++ A +F D RT VSWTAM++GYAQ EA+ LF M AAG
Sbjct: 161 SSALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEAVTLFSDMVAAG 220
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+P+ +T++S + L +G+ + G NV + NALI MY +CGS AR
Sbjct: 221 VLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITMYGRCGSAPVAR 280
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
LF + +T+VSW TM+A +G+ V+A+ F +M+ + + VT ++VL AC +G
Sbjct: 281 VLFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSG 340
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI-WGT 533
L G + + + + + ++ + + + D+ + G++ A + S ++ + + W
Sbjct: 341 ALGTG-KWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSA 399
Query: 534 LLCACKIHRNIEIGEYVAYRLFEL 557
++ A H E A +LF L
Sbjct: 400 MINAYANHGEAE----EALKLFSL 419
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 12/325 (3%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTF-PFIAKACAKLSDFL-YS 73
+ T+ W + + +A+ LF M + PN +T F+ C + ++L
Sbjct: 187 ARTVVSWTAMVAGYAQNCFFGEAVTLFSDMVAAGVLPNEITLISFLP--CLRGQEWLPVG 244
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+M+HG +VK F +++ + ++ MY +C A LF+ M R + SWN M+ + Q
Sbjct: 245 EMVHGFVVKLGFDANVPMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQH 304
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G + + F M + D VT++ + A + L K VH G+D D +
Sbjct: 305 GDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDARIG 364
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLR--TVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
N + YAKC ++ A+ VF GLR +VVSW+++I + +++L + M
Sbjct: 365 NVLVDMYAKCGEIAYAKEVFH--SHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRN 422
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN--TLISMYSKCGDI 309
+G RP+ T ++L +C C LV L H + I + + ++ + ++ M + G +
Sbjct: 423 EGVRPNSFTFTAVLMAC-CHSGLVDEGLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRL 481
Query: 310 DSARFLFDGMCDRT-RVSWTAMISG 333
A + GM R + W A + G
Sbjct: 482 VEAYGIIRGMPIRPDKCVWGAFLGG 506
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S T+ WN+ + + +A+ FRRM + + +T + ACA+ +
Sbjct: 288 SRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKW 347
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAMIVGFAQM 133
+H +D + +VDMYAKC + A ++F + V SW+AMI +A
Sbjct: 348 VHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANH 407
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVSV 192
G E+ L LF MR G++ + T + A H+ + LK +S + +
Sbjct: 408 GEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDEGLKHFNSIATDYQMSPTLEH 467
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ + L A + RG+ V W + +GGC
Sbjct: 468 YACMVDMLGRAGRLVEAYGIIRGMPIRPDKCV-WGAFLGGC 507
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R ++ W++ I + EA +AL LF M+ + PN+ TF + AC S +
Sbjct: 390 RGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCH-SGLVDEG 448
Query: 75 MIHGHIVKSPFWSDIFVQ--TTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFA 131
+ H + + + + ++ MVDM + RL AY + MP R D W A + G
Sbjct: 449 LKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCVWGAFLGGCR 508
Query: 132 QMGFLE 137
G +E
Sbjct: 509 LHGMVE 514
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 273/501 (54%), Gaps = 2/501 (0%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFA--QMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
L A ++FD P RD WN ++ + Q+ L L+ MR G+ D T +
Sbjct: 68 LAYARRVFDATPVRDAYMWNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVL 127
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
A A+ L L ++VH + + D V + I+ Y + ++ AELVF RT
Sbjct: 128 PACAAARELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRT 187
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VVSW S++ G F +++ + MI +G P+ T++S L E L G +VH
Sbjct: 188 VVSWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHG 247
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
I GFD ++ + N LI+MY KCG I A+ LF+GM R+ SW M++ Y Q D+ E
Sbjct: 248 FVIRLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVE 307
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A++ F M D VT++S++S C +SGAL+ GKW A + GL + + N L+D
Sbjct: 308 AIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVD 367
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY+KCG I AR +F L ++VVSW+ MI+ A +G EAL LF M +RPN T
Sbjct: 368 MYAKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFT 427
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F AVL AC H+G +E+G +FN + YQ++P L HY+CM D+LGR G+L EA + ++ M
Sbjct: 428 FTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGM 487
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
+ D +WG L CK+H N+E+ E+VA LF+ + YV M+N+Y G
Sbjct: 488 SLCPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKDAE 547
Query: 583 NLRTMMKRNQVKKFPGQSLVH 603
+R MK ++ K G+S ++
Sbjct: 548 RMRWAMKEMELNKTAGRSAIN 568
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 236/460 (51%), Gaps = 24/460 (5%)
Query: 22 WNSQIREAVDKNEAHKA--LLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN+ +R +H A L L++RM+ + P++ T+P + ACA + + +HG
Sbjct: 86 WNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGD 145
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM--PDRDVASWNAMIVGFAQMGFLE 137
+V+ D FV + ++ MY + + A +F + R V SW +M+ G+ Q +
Sbjct: 146 VVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFG 205
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF M G+ + +T++ + L + VH F I +G DA++ + N I
Sbjct: 206 EAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIPLANALI 265
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y KC + MA+ +F G+ R++ SWN+++ +++ F+R M+ + D
Sbjct: 266 AMYGKCGSIPMAQTLFEGMPA--RSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFD 323
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+VS+LS+C AL G+ VH ++G D D + N L+ MY+KCG+I SAR +FD
Sbjct: 324 CVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFD 383
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R+ VSW+AMIS YA G +EAL+LF M+ G P+ T +++ CG SG +E
Sbjct: 384 CLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEE 443
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIA 433
G K F++ + + ++DM + G + +A E+ + P+K V W +A
Sbjct: 444 GLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCV--WGAFLA 501
Query: 434 GCALNG-----EFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
GC L+G EFV A DLF N VTF ++
Sbjct: 502 GCKLHGNLELAEFV-ARDLFQS------GSNDVTFYVLMS 534
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 178/409 (43%), Gaps = 40/409 (9%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTF-PFIAKACAKLSDFL-YS 73
S T+ W S + V +A+ LF M + PN +T F+ C + ++L
Sbjct: 185 SRTVVSWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLP--CLQGQEWLDAG 242
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+M+HG +++ F ++I + ++ MY KC + A LF+ MP R +ASWN M+ + Q
Sbjct: 243 EMVHGFVIRLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQH 302
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ + + F M + D VT++ + A + L K VH + G+D D +
Sbjct: 303 ADVVEAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIG 362
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N + YAKC ++ A VF + +R+VVSW+++I +++L + M +G
Sbjct: 363 NVLVDMYAKCGEIASARNVFDCLR--MRSVVSWSAMISAYANHGASEEALKLFSLMKNEG 420
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
RP+ T ++L +C LV+ L H N+++S Y ++
Sbjct: 421 VRPNSFTFTAVLVAC-GHSGLVEEGLKH--------------FNSILSDYQMSPTLE--- 462
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+ M+ + G L EA + M PD + ++GC G
Sbjct: 463 ------------HYACMVDMLGRAGRLIEAYEIIRGMSL---CPDKCVWGAFLAGCKLHG 507
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
LEL ++ G D V + +MY + G + DA + +A+ E
Sbjct: 508 NLELAEFVARDLFQSGSND-VTFYVLMSNMYFEAGMLKDAERMRWAMKE 555
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R ++ W++ I + + +AL LF MK + PN+ TF + AC S +
Sbjct: 386 RMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGH-SGLVEEG 444
Query: 75 MIHGHIVKSPFWSDIFVQ--TTMVDMYAKCDRLDCAYKLFDKM---PDRDVASWNAMIVG 129
+ H + + S + ++ MVDM + RL AY++ M PD+ V W A + G
Sbjct: 445 LKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCV--WGAFLAG 502
Query: 130 FAQMGFLE 137
G LE
Sbjct: 503 CKLHGNLE 510
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 200/594 (33%), Positives = 292/594 (49%), Gaps = 45/594 (7%)
Query: 30 VDKNEAHKALLLFRRMKKNDIEPNNLTFPFI----AKACAKLSD----FLYSQMIHGHIV 81
V AL LF RM ++ + + + + A+ACA D F Q IH IV
Sbjct: 217 VQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIV 276
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD V +++DMY KC ++D A K+FD +P+ SWN +I GF Q G K L
Sbjct: 277 RKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALE 336
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ M G + + VT + + I A+
Sbjct: 337 VLNLMEESGSEPNEVTYSNMLASCIKAR-------------------------------- 364
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
D+ A +F I +V +WN+++ G + D++ +R M + +PD TT+
Sbjct: 365 ---DVLSARAMFDKISR--PSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTL 419
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+LSSC L G VHS + + D+ V + L+ MYSKCG I AR +F+ M +
Sbjct: 420 AVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTE 479
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V W +MISG A +EA F M G +P + SMI+ C + ++ G+
Sbjct: 480 RDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQI 539
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G NV V +ALIDMY+KCG++ DAR F + K +V+W MI G A NG
Sbjct: 540 HAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFG 599
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+A+DLF M+ + RP+ VTF+AVL C+H+G +++ +FN M Y + P HY+C
Sbjct: 600 EKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTC 659
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ D LGR G+L E + +MP K D +W LL AC +H N E+GE A LF L+P +
Sbjct: 660 LIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKN 719
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+PYV ++NIYA GR + +R +M V K G S + F V D
Sbjct: 720 PSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVAD 773
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 180/367 (49%), Gaps = 16/367 (4%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N +SA + DL A + + + R VVSWN++I ++ ++L Y M+ +G
Sbjct: 78 NAALSAARRAGDLDAARALLDEMPD--RNVVSWNTVIAALARSERAGEALELYEGMLREG 135
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P T+ S+LS+C AL GR H + G D ++ V N L+ MY+KCG ++ A
Sbjct: 136 LVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAV 195
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFDGM VS+TAM+ G Q G +D+ALRLF M +G D V V S++ C Q+
Sbjct: 196 RLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQAC 255
Query: 374 ALE--------LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
A E LG+ G + V N+LIDMY+KC + +A ++F +LP +
Sbjct: 256 ASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNIST 315
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW +I G G + +AL++ + M E PN VT+ +L +C A + F+
Sbjct: 316 VSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDK 375
Query: 486 MTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
+++ V N L+ Y C +L E +Q ++ D +L +C
Sbjct: 376 ISRPSVTTWNTLLSGY-CQEEL---HQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGI 431
Query: 544 IEIGEYV 550
+++G V
Sbjct: 432 LDLGTQV 438
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 197/445 (44%), Gaps = 47/445 (10%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
LD A L D+MPDR+V SWN +I A+ + L L+ M G+ T+ + A
Sbjct: 90 LDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSA 149
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
L + H + +G+D ++ V N + Y KC ++ A +F G+ V
Sbjct: 150 CGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMAS--PNEV 207
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC--VCP------EALVQ 276
S+ +++GG DD+L + M G R D V S+L SC C A
Sbjct: 208 SFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRL 267
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ +H+ + GF D V N+LI MY+KC +D A +FD + + + VSW +I+G+ Q
Sbjct: 268 GQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQ 327
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +AL + ME +G P+ VT +M++ C
Sbjct: 328 AGSYAKALEVLNLMEESGSEPNEVTYSNMLASC--------------------------- 360
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
K + AR +F + +V +W T+++G + ++LF +M ++
Sbjct: 361 --------IKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNV 412
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
+P+R T +L +C+ G L+ G + + + ++ ++ S + D+ + G++ A
Sbjct: 413 QPDRTTLAVILSSCSRLGILDLGTQVHSASVR-FLLHNDMFVASGLVDMYSKCGQIGIAR 471
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIH 541
M + D W +++ IH
Sbjct: 472 IIFNRM-TERDVVCWNSMISGLAIH 495
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 159/356 (44%), Gaps = 14/356 (3%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+KI R S + WN+ + + + LFRRM+ +++P+ T I +C++L
Sbjct: 373 FDKISRPS-VTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGI 431
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+H V+ +D+FV + +VDMY+KC ++ A +F++M +RDV WN+MI G
Sbjct: 432 LDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISG 491
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
A E+ F MR G+ + + + + + +H+ + G D +
Sbjct: 492 LAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQN 551
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + I YAKC ++ A + F + + +V+WN +I G + +++ + +M
Sbjct: 552 VYVGSALIDMYAKCGNMDDARVFFDCMVT--KNIVAWNEMIHGYAQNGFGEKAVDLFEYM 609
Query: 250 IYDGFRPDVTTVVSLLSSC----VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ RPD T +++L+ C + EA+ +S YG LI +
Sbjct: 610 LTTEQRPDGVTFIAVLTGCSHSGLVDEAIA---FFNSMESTYGITPLAEHYTCLIDGLGR 666
Query: 306 CGDIDSARFLFDGM-CDRTRVSWTAMISGYA--QKGDLDE-ALRLFFAMEAAGEVP 357
G + L D M C + W +++ A +L E A + F ++ P
Sbjct: 667 AGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSP 722
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 288 GFDLDVSVINTLISMYS-------------------------------KCGDIDSARFLF 316
G D +IN L+ +YS + GD+D+AR L
Sbjct: 38 GLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALL 97
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M DR VSW +I+ A+ EAL L+ M G VP T+ S++S CG AL+
Sbjct: 98 DEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALD 157
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ A GL +N+ V NAL+ MY+KCG + DA LF + VS+T M+ G
Sbjct: 158 DGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLV 217
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
G +AL LF +M +R + V +VL +C A
Sbjct: 218 QAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQA 254
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%)
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ N NA + + G + AR L +P++ VVSW T+IA A + EAL+L+
Sbjct: 71 RPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEG 130
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
M+ L P T +VL AC L+ G L KV
Sbjct: 131 MLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKV 169
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 209/607 (34%), Positives = 309/607 (50%), Gaps = 13/607 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKK----NDIEPNNLTFPFIAKAC 64
+L + R + W + + V E L M + PN+ T +AC
Sbjct: 170 KLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEAC 229
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
L + + +HG+ VK V + + MY+KC + A LF ++P++DV SW
Sbjct: 230 GVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWT 289
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
++I + G + + + LF M G+Q D V V L ++ ++ K+ H+ +
Sbjct: 290 SLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKR 349
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN-SIIGGCTYGDKFDDSL 243
+V V N IS Y K + A VFR + + R SWN I+G C G L
Sbjct: 350 NFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQ--RDADSWNLMIVGYCKAGCDVK-CL 406
Query: 244 NFYRHMIYDG---FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
YR M + F D ++VS +SSC L GR H + I + D D SV N LI
Sbjct: 407 ELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLI 466
Query: 301 SMYSKCGDIDSARFLFD-GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
MY +CG D A +F V+W +IS YA G + A+ L+ M G P+
Sbjct: 467 GMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNS 526
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T++++IS C ALE G+ +Y G +V + ALIDMY+KCG +G AR +F +
Sbjct: 527 TTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDS 586
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ + VV+W MI+G ++GE +AL+LF +M ++PN VTFLA+L AC H+G LE+G
Sbjct: 587 MLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEG 646
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
F M K Y + P L HY+CM DLLG+ G L+EA D V +MP++ D GIWGTLL ACK
Sbjct: 647 RQLFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACK 705
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
+H + E+G +A + F + + Y+ ++N Y +WD + LR MK + V+K G
Sbjct: 706 LHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEIEKLREAMKNHGVQKGAGW 765
Query: 600 SLVHING 606
S V G
Sbjct: 766 SAVDYCG 772
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 247/535 (46%), Gaps = 22/535 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS IR ++ AL RRM + P+ T P A A A+L +H + V
Sbjct: 78 WNSLIRTHHCASDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCV 137
Query: 82 KSPFWS----DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + + V +++V MYA+C + A KLF++M +RDV +W A++ G + G
Sbjct: 138 RYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECG 197
Query: 138 KVLCLFYNM-RLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
L M RL G + + T+ +A L+ + +H + + +GV V
Sbjct: 198 DGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVI 257
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ S Y+KC+ + A +F + E + VVSW S+IG + +++ ++ M+ G
Sbjct: 258 SALFSMYSKCHSTEDACSLFPELPE--KDVVSWTSLIGIYCWRGLIREAMELFQEMMESG 315
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD V LLS + G+ H+ + F +V V N LISMY K +D+A
Sbjct: 316 LQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAG 375
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE---VPDLVTVLSMISGCG 370
+F + R SW MI GY + G + L L+ M+ + D +++S IS C
Sbjct: 376 RVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCS 435
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKTVVSWT 429
+ L LG+ Y+ L ++ V N LI MY +CG A ++F A + VV+W
Sbjct: 436 RLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWN 495
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---WGYFNLM 486
T+I+ A G A+ L+ QM+ L PN T + V+ AC + LE+G Y M
Sbjct: 496 TLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEM 555
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
Y V+ + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 556 GWDYDVSIN----TALIDMYAKCGQLGTARRIFDSM-LQHDVVAWNVMISGYGMH 605
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
VH+ + G ++ L+S YS G A F W ++I + D
Sbjct: 31 VHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASD 90
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL----KDNVM 395
AL M A+ P TV S + GAL +G Y GL +V
Sbjct: 91 FVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVA 150
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL- 454
V ++L+ MY++CG + DA +LF + E+ VV+WT +++GC NGE + L +M+ L
Sbjct: 151 VPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLA 210
Query: 455 ---DLRPNRVTFLAVLQAC 470
RPN T + L+AC
Sbjct: 211 GDGKARPNSRTMESGLEAC 229
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 273/497 (54%), Gaps = 2/497 (0%)
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS-VH 178
ASWNA + A+ ++ L L+ M G + T + + L L S +H
Sbjct: 21 TASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFT-FPFAFKSCASLSLPLAGSQLH 79
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
I G + + V + IS Y KC+ + A VF V +N++I G + +
Sbjct: 80 GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
F D++ +R M +G + T++ L+ C P L G +H+ + +G D D+SV N
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L++MY +CG +D AR LFDGM ++ ++W AMISGYAQ G L L+ ME G VPD
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPD 259
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT++ ++S C GA G+ + G N + NALI+MY++CG++ AR +F
Sbjct: 260 PVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFD 319
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ EK V+SWT +IAG ++G+ A+ LF +M+ D P+ F++VL AC+HAG EK
Sbjct: 320 GMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEK 379
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G YF M + Y + P HYSC+ DLLGR G+L+EA + SM ++ D +WG LL AC
Sbjct: 380 GLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGAC 439
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
KIHRN+E+ E ++ E EP + YV ++NI++ G +G+ +R MM+ ++KK PG
Sbjct: 440 KIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPG 499
Query: 599 QSLVHINGKTCTFTVED 615
S V G+ F D
Sbjct: 500 CSYVEYQGRIHLFLAGD 516
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 245/467 (52%), Gaps = 9/467 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+T WN+++RE + +AL L+ +M + PN TFPF K+CA LS L
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK-MPDRDVA-SWNAMIVGFAQM 133
+HGH++K+ + FVQT+++ MY KC + A K+FD+ R++A +NA+I G++
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ LF MR G+ + VT++GL HL S+H+ + G+D D+SV
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N ++ Y +C + A +F G+ E + +++WN++I G L+ YR M + G
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPE--KGLITWNAMISGYAQNGLAGHVLDLYRKMEFTG 255
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T+V +LSSC A GR V GF + + N LI+MY++CG++ AR
Sbjct: 256 IVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKAR 315
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FDGM ++ +SWTA+I+GY G + A++LF M ++ E+PD +S++S C +G
Sbjct: 316 AIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAG 375
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
E G +F GL+ + ++D+ + G + +AR+L ++ E W +
Sbjct: 376 LTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGAL 435
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC-THAGFLE 477
+ C ++ A F +++E + P + + +L + AG +E
Sbjct: 436 LGACKIHRNVELAELAFEKVIEFE--PTNIGYYVLLSNIFSEAGNME 480
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 200/608 (32%), Positives = 312/608 (51%), Gaps = 4/608 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ + + I W + V+ +AL L+ RM + + PN TF + A + L
Sbjct: 172 RVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG 231
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
Y +++H H++ ++ ++T +VDMY KC ++ A K+ + DV W A+I
Sbjct: 232 -LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIIS 290
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF Q + + F+ M G+ + T G+ A L L K +HS + G++
Sbjct: 291 GFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLEN 350
Query: 189 DVSVCNTWISAYAKC-NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
DVSV N+ + Y KC N ++ A FRGI V+SW S+I G + ++S+ +
Sbjct: 351 DVSVGNSLVDMYMKCSNMIEDAVRAFRGIAS--PNVISWTSLIAGFSEHGLEEESIKVFG 408
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G RP+ T+ ++L +C ++L Q R +H + I D DV V N L+ Y+ G
Sbjct: 409 AMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLG 468
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+D A + M R +++T++ + Q G+ + AL + M D ++ S +S
Sbjct: 469 MVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLS 528
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
+E GK Y+ GL + V N L+D+Y KCG I DA F + E VS
Sbjct: 529 AAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVS 588
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W +I G A NG AL F M + P+++T L VL AC+H G ++ G YF M
Sbjct: 589 WNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMR 648
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ + + P+L+HY C+ DLLGR G+L+EA++ +++MP K DA I+ TLL ACK+H NI +G
Sbjct: 649 EKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLG 708
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E++A + EL+P A YV +AN+Y GR + R MM+ V+K PGQS +
Sbjct: 709 EHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNM 768
Query: 608 TCTFTVED 615
FT D
Sbjct: 769 VHLFTAGD 776
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 201/396 (50%), Gaps = 4/396 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH I+K F D+F+ ++ +Y KC + A +LFD+MP RDVASW ++ + ++G
Sbjct: 37 IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ L LF +M + G + T+ ++ + + + G D++ + +
Sbjct: 97 HEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSA 156
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I Y+KC + A VF + G +VSW ++ + +L Y MI G
Sbjct: 157 LIDFYSKCGCTQEAYRVFEYMNNG--DIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVA 214
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T V LL++ L G+LVH+H + + +L++ + L+ MY KC I+ A +
Sbjct: 215 PNEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKV 273
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ WTA+ISG+ Q EA+ F ME +G VP+ T +++ C AL
Sbjct: 274 SKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILAL 333
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS-IGDARELFYALPEKTVVSWTTMIAG 434
+LGK + GL+++V V N+L+DMY KC + I DA F + V+SWT++IAG
Sbjct: 334 DLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAG 393
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+ +G E++ +F M + +RPN T +L AC
Sbjct: 394 FSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 252/531 (47%), Gaps = 18/531 (3%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL LF M + PN T ++C+ L +F + + KS F S+ + + ++
Sbjct: 99 EALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALI 158
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
D Y+KC AY++F+ M + D+ SW M+ F + G + L L++ M G+ +
Sbjct: 159 DFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEF 218
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + L A+ L+ K VH+ + ++ ++ + + Y KC ++ A V +
Sbjct: 219 TFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLT 277
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E V W +II G T KF +++ + M G P+ T +L++C AL
Sbjct: 278 LE--YDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDL 335
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRVSWTAMISGYA 335
G+ +HS + G + DVSV N+L+ MY KC + I+ A F G+ +SWT++I+G++
Sbjct: 336 GKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFS 395
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+ G +E++++F AM+ G P+ T+ +++ CG +L + Y ++V+
Sbjct: 396 EHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVV 455
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V NAL+D Y+ G + DA + + + V+++T++ G AL++ M + D
Sbjct: 456 VGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDD 515
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY----SCMADLLGRKGK 511
+R + + + L A +E G Y V L + + + DL G+ G
Sbjct: 516 VRMDGFSLASFLSAAAGIPIMETG-----KQLHCYSVKSGLGSWISVSNGLVDLYGKCGC 570
Query: 512 LKEA-LDFVQSMPIKSDAGIWGTLL--CACKIHRNIEIGEYVAYRLFELEP 559
+ +A F++ + DA W L+ A H + + + RL +EP
Sbjct: 571 IHDAHRSFLE--ITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEP 619
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 133/259 (51%), Gaps = 3/259 (1%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G +HS I GF D+ + N L+S+Y KC + AR LFD M R SWT ++S Y +
Sbjct: 34 GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGK 93
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G+ +EAL LF +M +GE P+ T+ + + C G F G N ++
Sbjct: 94 IGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVL 153
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
+ALID YSKCG +A +F + +VSWT M++ G + +AL L+H+M++ +
Sbjct: 154 GSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGV 213
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
PN TF+ +L A + G + +LM ++N L + + D+ + +++A+
Sbjct: 214 APNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLK--TALVDMYCKCQSIEDAV 271
Query: 517 DFVQSMPIKSDAGIWGTLL 535
V + ++ D +W ++
Sbjct: 272 K-VSKLTLEYDVFLWTAII 289
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 191/607 (31%), Positives = 321/607 (52%), Gaps = 7/607 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N + TI+ WNS I + ++L F M++ + + +T + AC
Sbjct: 409 FNNMQERDTIS-WNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQH 467
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +HG I KS S++ V +++ MYA+ + A +F MP RD+ SWN+M+
Sbjct: 468 LKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMAS 527
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G + L M ++VT T A +L LK VH+F IH V +
Sbjct: 528 HVEDGKYSHAILLLVEMLKTRKAMNYVT---FTTALSACYNLEKLKIVHAFVIHFAVHHN 584
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ + NT ++ Y K + A+ V + + E R VV+WN++IGG + ++ + M
Sbjct: 585 LIIGNTLVTMYGKFGLMDEAQKVCKIMPE--RDVVTWNALIGGHADDKDPNATIQAFNLM 642
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+G + T+V+LL +C+ P+ L++ G +H+H + GF+LD V ++LI+MY++CGD
Sbjct: 643 RREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGD 702
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
++++ ++FD + ++ +W A+ S A G +EAL+ M G D + ++
Sbjct: 703 LNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALAT 762
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
G L+ G+ ++ G + + V NA +DMY KCG I D + ++ SW
Sbjct: 763 IGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSW 822
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+I+ A +G F +A + FH+M++L L+P+ VTF+++L AC+H G +++G YF+ MT
Sbjct: 823 NILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTS 882
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ V + H C+ DLLGR G+L EA F+ MP+ + +W +LL ACK+H N+E+G
Sbjct: 883 EFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGR 942
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A RLFEL + YV +N+ A RW V N+R M+ +KK P S + + K
Sbjct: 943 KAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKV 1002
Query: 609 CTFTVED 615
TF + D
Sbjct: 1003 MTFGMGD 1009
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 234/479 (48%), Gaps = 9/479 (1%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
F+ K +++S+ + +H VK + F T+V+MY+K + A +FDKM DR
Sbjct: 152 FLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDR 211
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSV 177
+ ASWN MI GF ++G+ K + F +M G+ + + A + ++ + +
Sbjct: 212 NDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQI 271
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H + + G+ ++V V + + Y + A +F IEE +VSW S++
Sbjct: 272 HGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEP--NIVSWTSLMVCYADNG 329
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD-VSVI 296
+ LN YRH+ ++G T+ +++ +C G + I G D VSV
Sbjct: 330 HTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVA 389
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N+LISM+ ++ A +F+ M +R +SW ++I+ A G +E+L FF M
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
D +T+ +++ CG + L+ G+ GL+ NV VCN+L+ MY++ GS DA +
Sbjct: 450 TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELV 509
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F+ +P + ++SW +M+A +G++ A+ L +M++ N VTF L AC + L
Sbjct: 510 FHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---L 566
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
EK + + V+ L + + + G+ G + EA + MP + D W L+
Sbjct: 567 EK-LKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALI 623
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 135/538 (25%), Positives = 252/538 (46%), Gaps = 16/538 (2%)
Query: 11 NKIYRS---STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
NK++ I W S + D + L ++R ++ N + T + + C
Sbjct: 304 NKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMF 363
Query: 68 SDFLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
D I G ++KS S + V +++ M+ D ++ A ++F+ M +RD SWN++
Sbjct: 364 GDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSI 423
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I A G E+ L F+ MR + D++T+ L A A+HL + +H G+
Sbjct: 424 ITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGL 483
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
+++V VCN+ +S YA+ + AELVF + R ++SWNS++ K+ ++
Sbjct: 484 ESNVCVCNSLLSMYAQAGSSEDAELVFHTMPA--RDLISWNSMMASHVEDGKYSHAILLL 541
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M+ + T + LS+C E L ++VH+ IH+ ++ + NTL++MY K
Sbjct: 542 VEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKF 598
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G +D A+ + M +R V+W A+I G+A D + ++ F M G + + +T+++++
Sbjct: 599 GLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLL 658
Query: 367 SGC-GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
C L+ G + G + + V ++LI MY++CG + + +F L K
Sbjct: 659 GTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNS 718
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
+W + + A G EAL +M + ++ +F L + L++G L
Sbjct: 719 STWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQ---QL 775
Query: 486 MTKVYQVNPELNHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + ++ EL+ Y A D+ G+ G++ + + I+S W L+ A H
Sbjct: 776 HSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRS-WNILISALARH 832
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 226/459 (49%), Gaps = 7/459 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY-SQMIHGHI 80
WN+ I V HKA+ F M +N + P++ + AC + ++ IHG++
Sbjct: 216 WNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYV 275
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK S++FV T+++ Y + A KLF+++ + ++ SW +++V +A G ++VL
Sbjct: 276 VKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVL 335
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISA 199
++ ++R G+ T+ + + ++ + I G+D + VSV N+ IS
Sbjct: 336 NIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISM 395
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
+ + ++ A VF ++E R +SWNSII + +F++SL + M + D
Sbjct: 396 FGNYDSVEEASRVFNNMQE--RDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYI 453
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ +LL +C + L GR +H G + +V V N+L+SMY++ G + A +F M
Sbjct: 454 TISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTM 513
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R +SW +M++ + + G A+ L M + + VT + +S C LE K
Sbjct: 514 PARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLK 570
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ + N+++ N L+ MY K G + +A+++ +PE+ VV+W +I G A +
Sbjct: 571 IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDK 630
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ + F+ M L N +T + +L C +L K
Sbjct: 631 DPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLK 669
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 184/607 (30%), Positives = 323/607 (53%), Gaps = 4/607 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N+I TI+ WNS + ++ +F M++ E N+ T + +
Sbjct: 319 FNQISERDTIS-WNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDH 377
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + IHG +VK F S + V T++ MYA R + A +F +MP +D+ SWN+++
Sbjct: 378 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMAS 437
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
F G L + +M G ++VT A + + +H + G+ +
Sbjct: 438 FVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDN 497
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ N +S Y K + + V ++ R VV+WN++IGG + D +L ++ +
Sbjct: 498 QIIGNALVSMYGKIGGMSTSRRVL--LQMPRRDVVAWNALIGGYAENEDPDKALAAFQTL 555
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+G + TVVS+LS+C+ P L++ G+ +H++ + GF+ D V N+LI+MY+KCGD
Sbjct: 556 RVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 615
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ S++ LF+G+ +R+ ++W A+++ A G +E L+L M + G D + +S
Sbjct: 616 LSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSA 675
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
+ LE G+ A G + + + NA DMYSKCG IG+ ++ +++ SW
Sbjct: 676 AAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 735
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+I+ +G F E + FH+M+E+ ++P VTF+++L AC+H G +++G Y++++ K
Sbjct: 736 NILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAK 795
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ + P + H C+ DLLGR G+L EA F+ MP+K + +W +LL +CKIHR+++ G
Sbjct: 796 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGR 855
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A L +LEP + +V +N++A GRW+ V N+R M +KK S V + K
Sbjct: 856 KAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKV 915
Query: 609 CTFTVED 615
+F + D
Sbjct: 916 SSFGIGD 922
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 260/528 (49%), Gaps = 11/528 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + DK E + + +++ M+ +E N + + +C L D + I G ++
Sbjct: 229 WTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVI 288
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS S + V+ +++ M+ +D A +F+++ +RD SWN+++ +AQ G +E+
Sbjct: 289 KSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSR 348
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR + + TV L H + +H + +G D+ V VCNT + YA
Sbjct: 349 IFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 408
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ A+LVF+ + + ++SWNS++ + D+L MI G + T
Sbjct: 409 GAGRSEEADLVFKQMPT--KDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTF 466
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L++C PE +GR++H + G + + N L+SMY K G + ++R + M
Sbjct: 467 TSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPR 526
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG-ALELGKW 380
R V+W A+I GYA+ D D+AL F + G + +TV+S++S C G LE GK
Sbjct: 527 RDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKP 586
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y S G + + V N+LI MY+KCG + +++LF L +++++W ++A A +G
Sbjct: 587 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGH 646
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHY 499
E L L +M L ++ +F L A LE+G L K+ ++++ + +
Sbjct: 647 GEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFI--F 704
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGI--WGTLLCACKIHRNIE 545
+ AD+ + G++ E V+ +P + + W L+ A H E
Sbjct: 705 NAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 749
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 228/460 (49%), Gaps = 4/460 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL-SDFLYSQMIHGHI 80
WN+ + V + + F++M I+P++ + AC + S F +HG +
Sbjct: 127 WNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 186
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
KS SD++V T ++ +Y + C+ K+F++MPDR+V SW +++VG++ G E+V+
Sbjct: 187 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 246
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ +MR G++ + ++ + + K SL + + I G+++ ++V N+ IS +
Sbjct: 247 DIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMF 306
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++ A +F I E R +SWNSI+ ++S + M + TT
Sbjct: 307 GNMGNVDYANYIFNQISE--RDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTT 364
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V +LLS + GR +H + GFD V V NTL+ MY+ G + A +F M
Sbjct: 365 VSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP 424
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SW ++++ + G +AL + +M G+ + VT S ++ C + G+
Sbjct: 425 TKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRI 484
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
GL DN ++ NAL+ MY K G + +R + +P + VV+W +I G A N +
Sbjct: 485 LHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENED 544
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG-FLEKG 479
+AL F + + N +T ++VL AC G LE+G
Sbjct: 545 PDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERG 584
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 221/465 (47%), Gaps = 9/465 (1%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H VK + T+++MY K R+ A LFDKMP R+ SWN M+ G ++
Sbjct: 78 RALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRV 137
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK---SVHSFGIHIGVDADV 190
G + + F M +GI+ + L A + S+ + VH F G+ +DV
Sbjct: 138 GLYLEGMEFFQKMCDLGIKPSSFVIASLVTAC--GRSGSMFREGVQVHGFVAKSGLLSDV 195
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V + Y + + VF + + R VVSW S++ G + + ++ ++ Y+ M
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKSMR 253
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G + ++ ++SSC + GR + I G + ++V N+LISM+ G++D
Sbjct: 254 GEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVD 313
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
A ++F+ + +R +SW ++++ YAQ G ++E+ R+F M + + TV +++S G
Sbjct: 314 YANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLG 373
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ G+ G V VCN L+ MY+ G +A +F +P K ++SW +
Sbjct: 374 DVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNS 433
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
++A +G ++AL + M+ N VTF + L AC F +KG L+
Sbjct: 434 LMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSG 493
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ ++ + + + G+ G + + + MP + D W L+
Sbjct: 494 LFDNQIIG-NALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALI 536
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 1/195 (0%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +H+ + L V NTLI+MY+K G + AR+LFD M R VSW M+SG +
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVM 395
G E + F M G P + S+++ CG+SG++ G + GL +V
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V A++ +Y G + +R++F +P++ VVSWT+++ G + GE E +D++ M
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256
Query: 456 LRPNRVTFLAVLQAC 470
+ N + V+ +C
Sbjct: 257 VECNENSMSLVISSC 271
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 322/602 (53%), Gaps = 6/602 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + W + I + + L LF RM+ +PN+ TF A+
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +VK+ I V +++++Y KC + A LFDK + V +WN+MI G+A G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L +FY+MRL ++ + + + + K L + +H + G D ++
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ AY+KC + A +F+ I + VVSW ++I G D +++++ + M G
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIG-CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
RP+ T +L++ ++ VH+ + ++ +V L+ Y K G ++ A
Sbjct: 394 RPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F G+ D+ V+W+AM++GYAQ G+ + A+++F + G P+ T S+++ C + A
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 375 -LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+ GK F +A L ++ V +AL+ MY+K G+I A E+F EK +VSW +MI+
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A +G+ ++ALD+F +M + ++ + VTF+ V ACTHAG +E+G YF++M + ++
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P H SCM DL R G+L++A+ +++MP + + IW T+L AC++H+ E+G A +
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEK 689
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+ ++P +A YV ++N+YA G W A +R +M VKK PG S + + KT +F
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLA 749
Query: 614 ED 615
D
Sbjct: 750 GD 751
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 243/513 (47%), Gaps = 20/513 (3%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A LF + + +E + F + K A L D L+ + +H +K F D+ V T++
Sbjct: 75 QEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSL 134
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD- 154
VD Y K K+FD+M +R+V +W +I G+A+ ++VL LF M+ G Q +
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 155 --FVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
F +G L + + + L VH+ + G+D + V N+ I+ Y KC +++ A +
Sbjct: 195 FTFAAALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
+F E +++VV+WNS+I G ++L + M + R ++ S++ C
Sbjct: 251 LFDKTE--VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSARFLFDGMCDRTRVSWTAM 330
+ L +H + YGF D ++ L+ YSKC +D+ R + C VSWTAM
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF--DNYACSG 388
ISG+ Q +EA+ LF M+ G P+ T +++ E+ NY S
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS 428
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
V AL+D Y K G + +A ++F + +K +V+W+ M+AG A GE A+ +F
Sbjct: 429 ------TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
++ + ++PN TF ++L C F+ +++ L S + + +
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
KG ++ A + + K D W +++ H
Sbjct: 543 KGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 180/369 (48%), Gaps = 7/369 (1%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
RL A+ LFDK P RD S+ +++ GF++ G ++ LF N+ +G++ D + +
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
+ + +H I G DVSV + + Y K ++ K VF ++E R V
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--RNV 159
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR--LVH 281
V+W ++I G D+ L + M +G +P+ T + L V E V GR VH
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG--VLAEEGVGGRGLQVH 217
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ + G D + V N+LI++Y KCG++ AR LFD ++ V+W +MISGYA G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EAL +F++M + S+I C L + G + + AL+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 402 DMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
YSKC ++ DA LF + VVSWT MI+G N EA+DLF +M +RPN
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 461 VTFLAVLQA 469
T+ +L A
Sbjct: 398 FTYSVILTA 406
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 130/254 (51%), Gaps = 4/254 (1%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL--SSCVCPEALVQGR 278
R S+ S++ G + + ++ + ++ G D + S+L S+ +C E GR
Sbjct: 56 RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF--GR 113
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H I +GF DVSV +L+ Y K + R +FD M +R V+WT +ISGYA+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
DE L LF M+ G P+ T + + + G G GL + V N
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LI++Y KCG++ AR LF K+VV+W +MI+G A NG +EAL +F+ M +R
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 459 NRVTFLAVLQACTH 472
+ +F +V++ C +
Sbjct: 294 SESSFASVIKLCAN 307
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 21/117 (17%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K R + WNS I +A KAL +F+ MKK ++ + +TF + AC
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA---- 609
Query: 72 YSQMIHGHIVKSPFWSDIFVQ-----------TTMVDMYAKCDRLDCAYKLFDKMPD 117
G + + + DI V+ + MVD+Y++ +L+ A K+ + MP+
Sbjct: 610 ------GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 201/606 (33%), Positives = 315/606 (51%), Gaps = 10/606 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLS 68
NK+ I+ W + I V+ +++AL+LF M + ++ + KACA
Sbjct: 107 FNKMSHRDEIS-WTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGM 165
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + +++HG VKS + +FV + +VDMY K + + +F+ M R+V SW A+IV
Sbjct: 166 NVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIV 225
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G G L F M + D T +A+ + L K++H+ I G +
Sbjct: 226 GLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNE 285
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY---GDKFDDSLNF 245
V NT + Y+KC +F + VVSW ++I TY GD+ + +L+
Sbjct: 286 TAYVVNTLGTMYSKCRKPDYVMRLFGKM--STPDVVSWTNLI--MTYVQMGDE-ERALDA 340
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
++ M P+ T S++S+C G +H H + G +SV N++I++YSK
Sbjct: 341 FKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSK 400
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG + A +FDGM + +SW+ +IS Y Q EA M G P+ + S+
Sbjct: 401 CGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASV 460
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+S CG LE GK YA GL MV +ALI MYS+ G++ +A ++F ++ +
Sbjct: 461 LSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDI 520
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSWT MI G A +G EA+ LF + + L P+ VTF+ +L AC HAG ++ G+ Y+ L
Sbjct: 521 VSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKL 580
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
MT YQ+ P HY C+ DLL R G+L EA V++MP D +W TLL AC+ H +++
Sbjct: 581 MTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLD 640
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+ A ++ L P+SA ++ +ANIY+ GR + A++R +MK V K PG S ++ N
Sbjct: 641 RAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSN 700
Query: 606 GKTCTF 611
+ TF
Sbjct: 701 DQLNTF 706
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 204/477 (42%), Gaps = 17/477 (3%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P N +P A C D ++ + + ++ + + K ++ A +
Sbjct: 50 PLNYVYPGTATEC---RDMIWQGKPEQRAPTAYYVPNMPELNSQLKQLMKLGKICEARDM 106
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL-VGIQAD-FVTVMGLTQAAIHAK 169
F+KM RD SW +I G+ + L LF NM + G+Q D FV + L A+
Sbjct: 107 FNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACAL-GM 165
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
++ + +H F + G+ V V + + Y K + VF + R VVSW ++
Sbjct: 166 NVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTT--RNVVSWTAV 223
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G + D L+++ M D T L + L G+ +H+ I GF
Sbjct: 224 IVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGF 283
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ V+NTL +MYSKC D LF M VSWT +I Y Q GD + AL F
Sbjct: 284 NETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKR 343
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M + P+ T S+IS C + G+ +A GL D + V N++I +YSKCG
Sbjct: 344 MRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGL 403
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ +A +F + K ++SW+T+I+ EA + M +PN +VL
Sbjct: 404 LQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSV 463
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNH----YSCMADLLGRKGKLKEALDFVQSM 522
C LE G Y + L+H +S + + R G L+EA S+
Sbjct: 464 CGSMALLEPG-----KQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSI 515
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 310/596 (52%), Gaps = 36/596 (6%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
P + T ++ C L + +H I+ + + +V + L A+K
Sbjct: 33 SPTHQTLHYLIDQCISLKQL---KHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHK 89
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD++P + +N +I G++ K L L+ M GI + T+ + +A
Sbjct: 90 LFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSC 149
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L VH+ +G+ + V N ++ Y C + A VF I E RT+VSWNS+I
Sbjct: 150 YWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISE--RTLVSWNSMI 207
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + + ++++ +R M G PDV T+V LLS GR VH H + G +
Sbjct: 208 NGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIE 267
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD--------- 341
+D V N L+ MY+KCG++ A+ +FD M D+ VSWT MI+ YA G +D
Sbjct: 268 IDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQM 327
Query: 342 ----------------------EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
EA+ LF+ M +G + + T+++++S C G L LGK
Sbjct: 328 PGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGK 387
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+Y + + +CNA+IDMY+KCG++ A ++F+ +PEK VSW +I AL+G
Sbjct: 388 QAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHG 447
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EA+++F +M + P+ +TF +L AC+H+G ++ G YF +M + ++P++ HY
Sbjct: 448 YGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHY 507
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLLGR+G L EA+ ++ MP+K D +W LL AC+ + N+ IG+ + +L EL
Sbjct: 508 ACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGR 567
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+++ YV ++N+Y+ RWD + N+ ++ +N +KK S + I+G F V+D
Sbjct: 568 YNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDD 623
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 231/464 (49%), Gaps = 31/464 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N I+ + ++ K+LLL+RRM + I PN T PF+ KACA S + +H
Sbjct: 102 FNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSF 161
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S VQ ++++Y C + A ++FD + +R + SWN+MI G+++MG E+ +
Sbjct: 162 KLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVL 221
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ VG++ D T++GL + + L + VH + G++ D V N + YA
Sbjct: 222 MFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYA 281
Query: 202 KCNDLKMAELVFRGI----------------EEGL-------------RTVVSWNSIIGG 232
KC +LK A+ VF + GL + VVSWNSII
Sbjct: 282 KCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWC 341
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
+ ++++ + M G + TT+V++LSSC L G+ HS+ L
Sbjct: 342 HVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLS 401
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
++ N +I MY+KCG + +A +F GM ++ VSW +I A G EA+ +F M+A
Sbjct: 402 ATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQA 461
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+G PD +T ++S C SG ++ G+ +F+ + G+ +V ++D+ + G +G
Sbjct: 462 SGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLG 521
Query: 412 DARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+A L +P K VV W+ ++ C G + Q++EL
Sbjct: 522 EAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLEL 565
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 163/398 (40%), Gaps = 76/398 (19%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS I + +A+L+FR M++ +EP+ T + K +F + +H
Sbjct: 199 TLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVH 258
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
H+V + D V ++DMYAKC L CA +FD+M D+DV SW MI +A G ++
Sbjct: 259 LHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLID 318
Query: 138 KVL-------------------C------------LFYNMRLVGIQADFVTVMGLTQAAI 166
L C LFY M G+ A+ T++ + +
Sbjct: 319 CALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCS 378
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
H L+L K HS+ + ++CN I YAKC L+ A VF G+ E + VSW
Sbjct: 379 HMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPE--KNAVSW 436
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N IIG +++ + M G PD T LLS+C
Sbjct: 437 NVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSAC------------------ 478
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-----WTAMISGYAQKGDLD 341
S G +D+ + F+ M +S + M+ ++G L
Sbjct: 479 -----------------SHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLG 521
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
EA+ L M PD+V +++ C G L +GK
Sbjct: 522 EAISLIKKMPVK---PDVVVWSALLGACRTYGNLAIGK 556
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/442 (37%), Positives = 263/442 (59%), Gaps = 2/442 (0%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+K VH+ G+ D+ V N + AK DL A L+F +EE R VSW+ +IGG
Sbjct: 19 IKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEE--RDPVSWSVMIGGF 76
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
++ +R +I G +PD ++ ++ +C L+ GRL+HS + G LD
Sbjct: 77 VKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDN 136
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V +TL+ MY+KCG ID+A+ LFD M + V+ T MI+GYA+ G +E+ LF M
Sbjct: 137 FVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRD 196
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G VPD V ++++++ C + GA+ + +Y C+ +V + A+IDMY+KCGSI +
Sbjct: 197 GFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSS 256
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
RE+F + +K V+SW+ MI +G+ EAL+LFH M+ + PNR+TF+++L AC+HA
Sbjct: 257 REIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHA 316
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G ++ G F+LM+ Y V P++ HY+CM DLLGR G+L +AL +++M ++ D GIW
Sbjct: 317 GLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCA 376
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
L AC+IHR +++ E A L L+ + Y+ ++NIYA GRW VA +R +M + ++
Sbjct: 377 FLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRL 436
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
KK PG + + ++ F D
Sbjct: 437 KKIPGYTWIEVDNIIYRFGAGD 458
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 190/384 (49%), Gaps = 4/384 (1%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
F K + + +H + + D+ V ++ M AK L A+ LF+KM +R
Sbjct: 5 FFISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEER 64
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
D SW+ MI GF + G E+ F + G + D ++ + +A L + + +H
Sbjct: 65 DPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIH 124
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
S + G+ D VC+T + YAKC + A+ +F + + + +V+ +I G K
Sbjct: 125 STVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPK--KDLVTRTVMIAGYAECGK 182
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
++S + M DGF PD +V+++++C A+ + RLVH + + LDV +
Sbjct: 183 PNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTA 242
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
+I MY+KCG IDS+R +FD M + +SW+AMI Y G EAL LF M +G +P+
Sbjct: 243 MIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPN 302
Query: 359 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+T +S++ C +G ++ G + F + S G++ +V ++D+ + G + A L
Sbjct: 303 RITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLI 362
Query: 418 YALP-EKTVVSWTTMIAGCALNGE 440
+ EK W + C ++ +
Sbjct: 363 ENMEVEKDEGIWCAFLGACRIHRQ 386
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 175/378 (46%), Gaps = 17/378 (4%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
NK+ ++ W+ I V + + FR + + +P+N + PF+ KAC
Sbjct: 58 FNKMEERDPVS-WSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMG 116
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ ++IH ++K+ D FV +T+VDMYAKC +D A +LFD+MP +D+ + MI G
Sbjct: 117 LIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAG 176
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+A+ G + LF MR G D V ++ + A ++ + VH + D
Sbjct: 177 YAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD 236
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + I YAKC + + +F +E+ + V+SW+++IG Y + ++L + M
Sbjct: 237 VELGTAMIDMYAKCGSIDSSREIFDRMEQ--KNVISWSAMIGAYGYHGQGREALELFHMM 294
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+ G P+ T +SLL +C + G +L + YG DV ++ + + G
Sbjct: 295 LNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGR 354
Query: 309 IDSARFLFDGM-CDRTRVSWTAMISG---YAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
+D A L + M ++ W A + + Q ++A +L +++ + P +LS
Sbjct: 355 LDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQT--QNPGHYILLS 412
Query: 365 MISGCGQSGALELGKWFD 382
I G+W D
Sbjct: 413 NIYA-------NAGRWKD 423
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/601 (32%), Positives = 318/601 (52%), Gaps = 8/601 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S++ W + I + + LL+FR+M ++ N +T+ + + C L +MI
Sbjct: 223 SSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMI 282
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
I++SPF S + T+++ +Y +C LD A L + M RDV +WNAM+ AQ G
Sbjct: 283 DARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDN 342
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNT 195
+ + L M + G A+ VT + + +A + + LS + +H+ + G+ +V+V N+
Sbjct: 343 WEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNS 402
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y KC + A VF + + VSWN++I KF D+L + M +G R
Sbjct: 403 VITMYGKCGQTEAAMSVFEAMPR--KDDVSWNAVINASVGNSKFQDALELFHGMELEGLR 460
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI-NTLISMYSKCGDIDSARF 314
+ T++SLL +C E L R +H+ GF + + + N++++MY++CG + A+
Sbjct: 461 SNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKK 520
Query: 315 LFDGMCDRTRVSWTAMISGYAQK--GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
FD + ++ V+W+ +++ YAQ G A + F MEA G P VT +S + C
Sbjct: 521 AFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAM 580
Query: 373 GALELGKWFDNYACSGGLKDNVMVC-NALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
LE G+ A + G + +V N +I+MY KCGS DA+ +F +PEK ++SW ++
Sbjct: 581 ATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSL 640
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I A NG +EAL +M+ P+ T +++L +HAG LE+G +F + +
Sbjct: 641 IVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHG 700
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPI-KSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P C+ DLL RKG L A + + + P ++D W TLL ACK + + + G
Sbjct: 701 LEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRC 760
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
A R+FELEP + +V +AN+YA GRW + +R MM+R VKK PG S + ++G
Sbjct: 761 AERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHE 820
Query: 611 F 611
F
Sbjct: 821 F 821
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 222/435 (51%), Gaps = 3/435 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL LF RM+ P+ + F ACA + + + IH +V S S+I + ++V
Sbjct: 41 EALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLV 100
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+MY KC + CA K+FD M RDV SW AM+ +AQ G + L M G++ + V
Sbjct: 101 NMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQV 160
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + + + L L + +H I+ G++ D + N + Y C + VF +
Sbjct: 161 TFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRM 220
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
G +V+ W ++I GC+ ++++ L +R M +G + + T +S++ C +A+ +
Sbjct: 221 --GQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKE 278
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G ++ + + F + +LIS+Y +CG +D A+ L + M R V+W AM++ AQ
Sbjct: 279 GEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQ 338
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD-NYACSGGLKDNVM 395
GD EA+ L M+ G + VT LS++ C AL G+ G L+ V
Sbjct: 339 NGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVA 398
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V N++I MY KCG A +F A+P K VSW +I N +F +AL+LFH M
Sbjct: 399 VGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEG 458
Query: 456 LRPNRVTFLAVLQAC 470
LR N T L++L+AC
Sbjct: 459 LRSNEFTLLSLLEAC 473
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 234/486 (48%), Gaps = 12/486 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY KC R+ A +FD + ++V SW M+ ++Q G + L LF M+ G + D V
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ A + L + +HS + G+ +++ + N+ ++ Y KC D+ AE VF G+
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
LR VVSW +++ + +L M +G +P+ T V+++ C L G
Sbjct: 121 --LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLG 178
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R +H I+ G + D + N L+ MY CG D + +F M + + WT MI+G +Q
Sbjct: 179 RKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQN 238
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G +E L +F M+ G + VT +SM+ C A++ G+ D + ++
Sbjct: 239 GQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+LI +Y +CG + A+ L + ++ VV+W M+ CA NG+ EA+ L +M
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
N+VT+L+VL+AC + L +G + + E+ + + + G+ G+ + A+
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMS 418
Query: 518 FVQSMPIKSDAGIWGTLLCA----CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYA 573
++MP K D W ++ A K +E+ + ELE + + ++ + A
Sbjct: 419 VFEAMPRKDDVS-WNAVINASVGNSKFQDALEL-----FHGMELEGLRSNEFTLLSLLEA 472
Query: 574 LGGRWD 579
GG D
Sbjct: 473 CGGLED 478
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 215/631 (34%), Positives = 316/631 (50%), Gaps = 59/631 (9%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S I +WN I + ++AL +F+RM + + + N + ++ +L+ L+ +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
D+ M+ Y + L A +LF+ MP+RDV SWN M+ G+AQ G
Sbjct: 122 PE---------RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIGVDADVS 191
++ +F M + + V+ L A + + L KS ++ + VS
Sbjct: 173 VDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL-------VS 221
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
N + + K + A F + +R VVSWN+II G K D++ R +
Sbjct: 222 -WNCLLGGFVKKKKIVEARQFFDSM--NVRDVVSWNTIITGYAQSGKIDEA----RQLFD 274
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGR--------------------LVHSHGIHYGFDL 291
+ DV T +++S + + + R V + +L
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKEL 334
Query: 292 -------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+VS NT+I+ Y++CG I A+ LFD M R VSW AMI+GY+Q G EAL
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
RLF ME G + + S +S C ALELGK GG + V NAL+ MY
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
KCGSI +A +LF + K +VSW TMIAG + +G AL F M L+P+ T +
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
AVL AC+H G ++KG YF MT+ Y V P HY+CM DLLGR G L++A + +++MP
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ DA IWGTLL A ++H N E+ E A ++F +EP ++ YV ++N+YA GRW V L
Sbjct: 575 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R M+ VKK PG S + I KT TF+V D
Sbjct: 635 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 206/476 (43%), Gaps = 67/476 (14%)
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLF----------YNMRLVGI------------ 151
K D D+ WN I + + G + L +F YN + G
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 152 -----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
+ D V+ + + + ++L + + I + DV NT +S YA+ +
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKAREL----FEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 207 KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV--SL 264
A VF + E + VSWN+++ K +++ ++ R + V L
Sbjct: 174 DDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFKS------RENWALVSWNCL 225
Query: 265 LSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
L V + +V+ R S + DV NT+I+ Y++ G ID AR LFD +
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFD 382
+WTAM+SGY Q ++EA LF M E V+ +M++G Q +E+ K FD
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERMEMAKELFD 336
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
C NV N +I Y++CG I +A+ LF +P++ VSW MIAG + +G
Sbjct: 337 VMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
EAL LF QM R NR +F + L C LE G L ++ + E +
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG---KQLHGRLVKGGYETGCFVGN 448
Query: 503 ADLLG--RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
A LL + G ++EA D + M K D W T++ H GE VA R FE
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRH---GFGE-VALRFFE 499
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 271/495 (54%), Gaps = 4/495 (0%)
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKS-VHSF 180
WN + A+ + L L+ M G + + F L A A L +L S H
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCA--ALSLPILGSQFHGQ 65
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+G + V IS Y K + + A VF + V +N+++ G K
Sbjct: 66 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
D++ +R M +G + T++ L+ +CV P L G +H + YGFD DVSV+N I
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
+MY KCG ++ A+ LFD M + +SW AM+SGYAQ G L L+ M+ G PD V
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++ ++S C GA +G + + G N + NALI+MY++CG++ A+ +F +
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
PE+T+VSWT +I G ++G A+ LF +M+ + P+ F+ VL AC+HAG ++G
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 365
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
YF +M + YQ+ P HYSCM DLLGR G+LKEA ++SMPIK D +WG LL ACKI
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+N+E+ E R+ ELEP + YV ++NIY+ GV +R MMK ++KK PG S
Sbjct: 426 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 485
Query: 601 LVHINGKTCTFTVED 615
V + G+ F V D
Sbjct: 486 YVELKGRVHPFIVGD 500
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 232/450 (51%), Gaps = 8/450 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+Q+RE + + +AL L+ +M ++ PN TFPF K+CA LS + HG I
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAMIVGFAQMGFLEKV 139
K + FVQT ++ MY K +D A K+F++ + +NA++ G+
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF M G+ + VT++GL A + +L L S+H + G D+DVSV N +I+
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC + A+ +F E ++ ++SWN+++ G + L YR+M +G PD
Sbjct: 188 YMKCGSVNYAQKLFD--EMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+V +LSSC A G V GF + + N LI+MY++CG++ A+ +FDGM
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
+RT VSWTA+I GY G + A++LF M +G PD + ++S C +G + G
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 365
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCAL 437
++F + L+ + ++D+ + G + +A+ L ++P K W ++ C +
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ A F +++EL+ P + + +L
Sbjct: 426 HKNVELAELAFERVIELE--PENIGYYVLL 453
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 202/605 (33%), Positives = 328/605 (54%), Gaps = 88/605 (14%)
Query: 41 LFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
LF+ M ++ DI+PN + + K+ S + H++KS + D +V+ ++ +Y
Sbjct: 18 LFKHMLQHCDIKPNASFYSVMMKSAGS-----ESMLFLAHVLKSGYDRDHYVRNGILGIY 72
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
AK ++ A KLFD+MPDR VA WN MI G+ + G E+ LF+ VM
Sbjct: 73 AKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH-------------VM 119
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
G + + +V T I+ +AK +LK A + F + E
Sbjct: 120 GDQE----------------------ISRNVITWTTMITGHAKKGNLKTARMYFDKMPE- 156
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVC------PE 272
R+VVSWN+++ G G ++++ + M+ G +PD TT +++SSC E
Sbjct: 157 -RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSE 215
Query: 273 ALVQ-------------------------GRLVHSHGIH-----YGFDLDVSVINTLISM 302
++V+ G L +H I Y + V N +IS
Sbjct: 216 SIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVP-WNAMISA 274
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV--PDLV 360
Y++ GD+ SA+ LFD M R VSW +MI+GY Q G+ +A++LF M ++ + PD V
Sbjct: 275 YARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEV 334
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++S+ S CG G L LG W + ++ ++ V N+LI+MYS+CGS+ DA +F +
Sbjct: 335 TMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEM 394
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+ +VS+ T+I+G A +G +E+++L +M E + P+R+T++A+L AC+HAG L++G
Sbjct: 395 ATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQ 454
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
F + P+++HY+CM D+LGR G+L+EA+ +QSMP++ AGI+G+LL A I
Sbjct: 455 RLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSI 509
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+ +E+GE A +LF++EPH++ Y ++NIYA GRW +R M++ VKK G S
Sbjct: 510 HKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLS 569
Query: 601 LVHIN 605
+ N
Sbjct: 570 WLEHN 574
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKL 67
+K+ + T++ WNS I E+ KA+ LF M ++ +P+ +T + AC L
Sbjct: 288 FDKMPQRDTVS-WNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHL 346
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ + + I V ++++MY++C + A +F +M RD+ S+N +I
Sbjct: 347 GELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLI 406
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
GFA+ G + + L M+ GI+ D +T + + A HA
Sbjct: 407 SGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHA 447
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I + +++ L +MK++ IEP+ +T+ I AC+ Q +
Sbjct: 402 YNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQ----RLF 457
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
+S + D+ M+DM + RL+ A KL MP
Sbjct: 458 ESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMP 492
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 311/597 (52%), Gaps = 10/597 (1%)
Query: 22 WNSQIREAVDK---NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
WNS + + ++A +ALL M ++ + N + + AC + + +HG
Sbjct: 145 WNSLVSSFLANKMFDDARQALL---SMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHG 201
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K+ S + + +VDMY K ++ + K+F+ MP+R+ SWN+ I F G
Sbjct: 202 LVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGD 261
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
VL LF M G +T+ L A + + L + VH + I ++ D+ V N+ +
Sbjct: 262 VLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVD 321
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAK L+ A VF IE +R VVSWN++I ++ M DG P+
Sbjct: 322 MYAKFGSLEKACAVFEKIE--VRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNS 379
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+V+LL +C +L G+ +H+ I G D+ + N LI MY+KCG + A+ +FD
Sbjct: 380 ITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD- 438
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ ++ VS+ +I GY+Q E+L LF + + G D ++ + ++ C + + G
Sbjct: 439 LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQG 498
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K L ++ + N L+ +Y+K G + A ++F + EK V SW MI G ++
Sbjct: 499 KEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMH 558
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+ A LF M + + + V+++AVL C+H G +E+G YF+ M + P+ H
Sbjct: 559 GQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHML-AQNLEPQQMH 617
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM DLLGR G+L E+++ + MP +++ +WG LL AC+IH NIE+ +Y A LFEL+
Sbjct: 618 YACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELK 677
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + Y + N+YA GRW+ +RT+MK +V+K P S V K F V D
Sbjct: 678 PEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 734
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 159/557 (28%), Positives = 270/557 (48%), Gaps = 15/557 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ--MIHGH 79
WNS R + +ALL++ M ++ + P++ TFPF A A + ++ +H
Sbjct: 42 WNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAA 101
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
++S +D+F T+V YA C A ++FD+MP RDV SWN+++ F +
Sbjct: 102 ALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDA 161
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+M G+ + +++ + A + VH + G+D+ V++ N +
Sbjct: 162 RQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDM 221
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y K ++ + VF G+ E R VSWNS IG + D L +R M GF P
Sbjct: 222 YGKFGHVEASMKVFEGMPE--RNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSI 279
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ SLL + V GR VH + I +LD+ V N+L+ MY+K G ++ A +F+ +
Sbjct: 280 TLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKI 339
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R VSW AMI+ Q G EA L M+ GE P+ +T+++++ C + +L+ GK
Sbjct: 340 EVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGK 399
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
++ GL ++ + NALIDMY+KCG + A+ +F L EK VS+ T+I G + +
Sbjct: 400 QIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DLSEKDDVSYNTLILGYSQSP 458
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
E+L+LF Q+ + + + ++F+ L ACT+ ++G ++ + NH
Sbjct: 459 WSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLS----NHP 514
Query: 500 SCMADLLG--RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
LLG KG + + + + + D W ++ +H I+ A+ LF+L
Sbjct: 515 FLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQID----AAFHLFDL 570
Query: 558 EPHSAAPYVEMANIYAL 574
Y ++ I L
Sbjct: 571 MKDHGVTYDHVSYIAVL 587
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 8/286 (2%)
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
+YA +DL + L+ LR+ WNS+ + ++L Y HM+ G PD
Sbjct: 15 SYAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDD 74
Query: 259 TT--VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T ++ +G +H+ + G DV NTL++ Y+ CG AR +F
Sbjct: 75 RTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVF 134
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG--QSGA 374
D M R VSW +++S + D+A + +M +G ++ +++S++ CG Q G
Sbjct: 135 DEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGG 194
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LG GL V + NAL+DMY K G + + ++F +PE+ VSW + I G
Sbjct: 195 FGLG--VHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAI-G 251
Query: 435 CALN-GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
C LN G + + L LF M E P +T ++L A G+ + G
Sbjct: 252 CFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLG 297
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/633 (31%), Positives = 332/633 (52%), Gaps = 40/633 (6%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
SS+ N + + ++ + + L R+ + P + + KL D ++
Sbjct: 2 SSSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARN 61
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+ HI + ++F T++ Y+K L ++FD MP+ DV SWN+++ G+A G
Sbjct: 62 VFDHIPQP----NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGL 117
Query: 136 LEKVLCLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVH----SFG----IHIG 185
+ + + + YNM L + + +T + + + + L + +H FG + +G
Sbjct: 118 ISESVRV-YNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVG 176
Query: 186 V-----------------------DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
+ ++ V NT I+ +C + AE +F + E +
Sbjct: 177 SPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPE--KD 234
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
+SW +II G T F ++++ ++ M +GF D T S+L++C AL +G+ +H+
Sbjct: 235 SISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHA 294
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+ I + ++ V + L+ MY KC ++ A +F M + +SWTAM+ GY Q G +E
Sbjct: 295 YIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEE 354
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A+R+F M+ PD T+ S+IS C +LE G F A + GL V V NALI
Sbjct: 355 AVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALIT 414
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
+Y KCGS+ A +LF+ + + VSWT +++G A G+ E + LF M+ + P+ VT
Sbjct: 415 LYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVT 474
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F+ VL AC+ AG +EKG+ YF M K +++ P +HY+CM DLL R G+L+EA +F+ M
Sbjct: 475 FVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQM 534
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
P DA W TLL +C+++ N+EIG++ A L +LEP + A Y+ +++IYA G+WD VA
Sbjct: 535 PFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVA 594
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
LR M+ VKK PG S + K F+ +D
Sbjct: 595 KLRKGMREMGVKKEPGHSWIKYKNKVHIFSADD 627
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W + + + +A+ +F M++N+I P++ T + +CA L+
Sbjct: 332 RHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGA 391
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
HG + S + V ++ +Y KC L+ A++LF +M RD SW A++ G+AQ G
Sbjct: 392 QFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFG 451
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + LF M GI D VT +G+ A A
Sbjct: 452 KANETISLFETMLAHGIVPDGVTFVGVLSACSRA 485
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 199/637 (31%), Positives = 315/637 (49%), Gaps = 82/637 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + K E KAL MK + ++P+ +T
Sbjct: 259 WNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT------------------------- 293
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-----DRDVASWNAMIVGFAQMGFL 136
W+ I + YA+ + + A K F +M +V SW A+I G Q G+
Sbjct: 294 ----WNAI------ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNT 195
+ L +F M L G++ + +T+ A + L + +H + I + +D+D+ V N+
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 196 WISAYAKCNDLKMA------------------------------------ELVFRGIEEG 219
+ YAKC +++A E+ F+GIE
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP- 462
Query: 220 LRTVVSWNSIIGGCT-YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
+++WN ++ G T YGD +L F++ M G P+ TT+ L++C L G+
Sbjct: 463 --DIITWNGLVTGFTQYGDG-KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGK 519
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H + + +L V + LISMYS C ++ A +F + R V W ++IS AQ G
Sbjct: 520 EIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG 579
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
AL L M + + VT++S + C + AL GK + GL + N
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LIDMY +CGSI +R +F +P++ +VSW MI+ ++G ++A++LF + L+P
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKP 699
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N +TF +L AC+H+G +E+GW YF +M Y ++P + Y+CM DLL R G+ E L+F
Sbjct: 700 NHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF 759
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
++ MP + +A +WG+LL AC+IH N ++ EY A LFELEP S+ YV MANIY+ GRW
Sbjct: 760 IEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRW 819
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ A +R +MK V K PG S + + K +F V D
Sbjct: 820 EDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGD 856
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 253/548 (46%), Gaps = 82/548 (14%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+ + LF M + P++ FP + KAC++L ++ + ++ +++ F + V+ ++
Sbjct: 172 EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSI 231
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+DM+ KC R+D A + F+++ +DV WN M+ G+ G +K L +M+L G++ D
Sbjct: 232 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQ 291
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF-- 213
VT N IS YA+ + A F
Sbjct: 292 VT-----------------------------------WNAIISGYAQSGQFEEASKYFLE 316
Query: 214 -RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
G+++ VVSW ++I G ++L+ +R M+ +G +P+ T+ S +S+C
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376
Query: 273 ALVQGRLVHSHGIHY-GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR-VSWTAM 330
L GR +H + I D D+ V N+L+ Y+KC ++ AR F GM +T VSW AM
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAM 435
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG---------------------- 368
++GYA +G +EA+ L M+ G PD++T +++G
Sbjct: 436 LAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGM 495
Query: 369 -------------CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
CGQ L+LGK Y ++ + V +ALI MYS C S+ A
Sbjct: 496 DPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACS 555
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F L + VV W ++I+ CA +G V ALDL +M ++ N VT ++ L AC+
Sbjct: 556 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 615
Query: 476 LEKGWGYFNLMTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
L +G + + + N LN + D+ GR G ++++ MP + D W
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFILNS---LIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNV 671
Query: 534 LLCACKIH 541
++ +H
Sbjct: 672 MISVYGMH 679
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 2/272 (0%)
Query: 256 PD--VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD + S+L C L G VH+ + G D+ + + L+ +Y + G ++ AR
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD M +R SWTA++ Y GD +E ++LF+ M G PD + C +
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 204
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+GK +Y S G + N V +++DM+ KCG + AR F + K V W M++
Sbjct: 205 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVS 264
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G GEF +AL M ++P++VT+ A++ +G E+ YF M +
Sbjct: 265 GYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFK 324
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
P + ++ + + G EAL + M ++
Sbjct: 325 PNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 325/609 (53%), Gaps = 11/609 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R T+ WN+ I V +A+ F M K I+P+ ++F + A + L DF +
Sbjct: 171 RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNAN 230
Query: 75 MIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++HG +VK S + +D++V ++ + MYA+ L+ A K+FD +R+ WN MI F Q
Sbjct: 231 VVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQ 290
Query: 133 MGF-LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
F LE + F + D VT++ AA H + L + +H+F I V
Sbjct: 291 NNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVC 350
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N I+ Y++CN + + +F + E + VVSWN++I D++L + M
Sbjct: 351 VMNALIAMYSRCNSIDTSFKIFDNMPE--KDVVSWNTMISAFVQNGLNDEALMLFYEMKK 408
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
D TV +LLS+ G+ H + + G + + + LI MY+K G I++
Sbjct: 409 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEA 467
Query: 312 ARFLFDGMC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A+ +F+ +R + +W +M+SGY Q G +D+A + M +P++VT+ S++ C
Sbjct: 468 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPAC 527
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
SG ++ GK ++ L NV V ALIDMYSK GSI A +F EK++V+++
Sbjct: 528 NPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYS 587
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
TMI G +G AL +FH+M + ++P+ VT +AVL AC++AG +++G F M V
Sbjct: 588 TMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTV 647
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCACKIHRNIEIGE 548
Y + P H+ C+AD+LGR G++ +A +FV + K + IWG+LL AC+IH+ E+G+
Sbjct: 648 YNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGK 707
Query: 549 YVAYRLFELEPHSAAP--YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
VA +L E+E + +V ++NIYA W+ V +R M+ +KK G S + I G
Sbjct: 708 LVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAG 767
Query: 607 KTCTFTVED 615
F +D
Sbjct: 768 YMNHFASKD 776
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 231/487 (47%), Gaps = 26/487 (5%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKN--DIEPNNLTFPFIAKACAKLSDFLY 72
R ST+ WN+ I V N +ALL + MK + ++ ++ T+ + KACA + +
Sbjct: 56 RPSTV-LWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVV 114
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD-------------RLDCAYKLFDKMPDRD 119
+ +H H ++ V ++++MY+ C R D K+FD M R
Sbjct: 115 GKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRT 174
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V +WN +I + + + + F M +GI+ V+ + + A VH
Sbjct: 175 VVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHG 234
Query: 180 FGIHIGVD--ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
+ +G + D+ V ++ I YA+ L+ A+ VF E R WN++I +
Sbjct: 235 MLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLE--RNTEVWNTMISAFVQNN 292
Query: 238 KFDDSLN-FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ + F++ + + D T++S +S+ + +H+ I V V+
Sbjct: 293 FSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVM 352
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N LI+MYS+C ID++ +FD M ++ VSW MIS + Q G DEAL LF+ M+ +
Sbjct: 353 NALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLM 412
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
D VTV +++S ++GK Y G++ M + LIDMY+K G I A+ +
Sbjct: 413 VDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM-DSYLIDMYAKSGLIEAAQNV 471
Query: 417 FYA--LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
F E+ +W +M++G NG +A + QM++ + PN VT ++L AC +G
Sbjct: 472 FEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSG 531
Query: 475 FLEKGWG 481
+++ WG
Sbjct: 532 YID--WG 536
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 213/462 (46%), Gaps = 45/462 (9%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA--DFVTVMGL 161
+L A +LFD +P WN +I+G F ++ L + NM+ Q D T +
Sbjct: 43 QLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSV 102
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN----DLKM--------- 208
+A ++L + K+VH+ + ++ V N+ ++ Y+ C+ D KM
Sbjct: 103 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 162
Query: 209 AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
VF + + RTVV+WN++I +++ +++ + M+ G +P + V++ +
Sbjct: 163 VRKVFDTMRK--RTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAF 220
Query: 269 VCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS 326
+VH + G + D+ V+++ I MY++ G ++ A+ +FD +R
Sbjct: 221 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 280
Query: 327 WTAMISGYAQKGDLDEALRLFF-AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W MIS + Q E ++LFF A+E+ D VT+LS IS EL + +
Sbjct: 281 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 340
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
V V NALI MYS+C SI + ++F +PEK VVSW TMI+ NG EAL
Sbjct: 341 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 400
Query: 446 DLFHQMMELDLRPNRVTFLAVLQAC-----------THAGFLEKGWGYFNLMTKVYQVNP 494
LF++M + DL + VT A+L A TH L G + +
Sbjct: 401 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM--------- 451
Query: 495 ELNHYSCMADLLGRKGKLKEALD-FVQSMPIKSDAGIWGTLL 535
S + D+ + G ++ A + F +S + D W +++
Sbjct: 452 ----DSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 489
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 163/392 (41%), Gaps = 23/392 (5%)
Query: 165 AIHAKHLSLLKSVHSFGIHI-GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A A L L +S +H + + +S + L +A +F + +
Sbjct: 2 ASSATPLPLSQSPSHLPLHTHSTNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRP--ST 59
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDVTTVVSLLSSCVCPEALVQGRLVH 281
V WN+II G + D++L FY +M + D T S+L +C LV G+ VH
Sbjct: 60 VLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVH 119
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDI-------------DSARFLFDGMCDRTRVSWT 328
+H + + V N+L++MYS C D R +FD M RT V+W
Sbjct: 120 AHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWN 179
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
+I+ Y + EA++ F M G P V+ +++ G +
Sbjct: 180 TLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKL 239
Query: 389 GLK--DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
G + +++ V ++ I MY++ G + A+++F E+ W TMI+ N +E +
Sbjct: 240 GSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQ 299
Query: 447 LFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
LF Q +E D + VT L+ + A +H E + K V ++ + + +
Sbjct: 300 LFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVT-QVCVMNALIAM 358
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
R + + +MP K D W T++ A
Sbjct: 359 YSRCNSIDTSFKIFDNMPEK-DVVSWNTMISA 389
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 325/609 (53%), Gaps = 11/609 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R T+ WN+ I V +A+ F M K I+P+ ++F + A + L DF +
Sbjct: 147 RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNAN 206
Query: 75 MIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++HG +VK S + +D++V ++ + MYA+ L+ A K+FD +R+ WN MI F Q
Sbjct: 207 VVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQ 266
Query: 133 MGF-LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
F LE + F + D VT++ AA H + L + +H+F I V
Sbjct: 267 NNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVC 326
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N I+ Y++CN + + +F + E + VVSWN++I D++L + M
Sbjct: 327 VMNALIAMYSRCNSIDTSFKIFDNMPE--KDVVSWNTMISAFVQNGLNDEALMLFYEMKK 384
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
D TV +LLS+ G+ H + + G + + + LI MY+K G I++
Sbjct: 385 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEA 443
Query: 312 ARFLFDGMC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A+ +F+ +R + +W +M+SGY Q G +D+A + M +P++VT+ S++ C
Sbjct: 444 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPAC 503
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
SG ++ GK ++ L NV V ALIDMYSK GSI A +F EK++V+++
Sbjct: 504 NPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYS 563
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
TMI G +G AL +FH+M + ++P+ VT +AVL AC++AG +++G F M V
Sbjct: 564 TMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTV 623
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCACKIHRNIEIGE 548
Y + P H+ C+AD+LGR G++ +A +FV + K + IWG+LL AC+IH+ E+G+
Sbjct: 624 YNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGK 683
Query: 549 YVAYRLFELEPHSAAP--YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
VA +L E+E + +V ++NIYA W+ V +R M+ +KK G S + I G
Sbjct: 684 LVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAG 743
Query: 607 KTCTFTVED 615
F +D
Sbjct: 744 YMNHFASKD 752
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 231/487 (47%), Gaps = 26/487 (5%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKN--DIEPNNLTFPFIAKACAKLSDFLY 72
R ST+ WN+ I V N +ALL + MK + ++ ++ T+ + KACA + +
Sbjct: 32 RPSTV-LWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVV 90
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD-------------RLDCAYKLFDKMPDRD 119
+ +H H ++ V ++++MY+ C R D K+FD M R
Sbjct: 91 GKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRT 150
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V +WN +I + + + + F M +GI+ V+ + + A VH
Sbjct: 151 VVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHG 210
Query: 180 FGIHIGVD--ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
+ +G + D+ V ++ I YA+ L+ A+ VF E R WN++I +
Sbjct: 211 MLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLE--RNTEVWNTMISAFVQNN 268
Query: 238 KFDDSLN-FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ + F++ + + D T++S +S+ + +H+ I V V+
Sbjct: 269 FSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVM 328
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N LI+MYS+C ID++ +FD M ++ VSW MIS + Q G DEAL LF+ M+ +
Sbjct: 329 NALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLM 388
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
D VTV +++S ++GK Y G++ M + LIDMY+K G I A+ +
Sbjct: 389 VDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM-DSYLIDMYAKSGLIEAAQNV 447
Query: 417 FYA--LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
F E+ +W +M++G NG +A + QM++ + PN VT ++L AC +G
Sbjct: 448 FEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSG 507
Query: 475 FLEKGWG 481
+++ WG
Sbjct: 508 YID--WG 512
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 213/462 (46%), Gaps = 45/462 (9%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA--DFVTVMGL 161
+L A +LFD +P WN +I+G F ++ L + NM+ Q D T +
Sbjct: 19 QLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSV 78
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN----DLKM--------- 208
+A ++L + K+VH+ + ++ V N+ ++ Y+ C+ D KM
Sbjct: 79 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 138
Query: 209 AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
VF + + RTVV+WN++I +++ +++ + M+ G +P + V++ +
Sbjct: 139 VRKVFDTMRK--RTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAF 196
Query: 269 VCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS 326
+VH + G + D+ V+++ I MY++ G ++ A+ +FD +R
Sbjct: 197 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 256
Query: 327 WTAMISGYAQKGDLDEALRLFF-AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W MIS + Q E ++LFF A+E+ D VT+LS IS EL + +
Sbjct: 257 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 316
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
V V NALI MYS+C SI + ++F +PEK VVSW TMI+ NG EAL
Sbjct: 317 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 376
Query: 446 DLFHQMMELDLRPNRVTFLAVLQAC-----------THAGFLEKGWGYFNLMTKVYQVNP 494
LF++M + DL + VT A+L A TH L G + +
Sbjct: 377 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM--------- 427
Query: 495 ELNHYSCMADLLGRKGKLKEALD-FVQSMPIKSDAGIWGTLL 535
S + D+ + G ++ A + F +S + D W +++
Sbjct: 428 ----DSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 465
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 20/334 (5%)
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDVTTVVSLLSSCVCPEALVQGRL 279
+ V WN+II G + D++L FY +M + D T S+L +C LV G+
Sbjct: 34 STVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKA 93
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDI-------------DSARFLFDGMCDRTRVS 326
VH+H + + V N+L++MYS C D R +FD M RT V+
Sbjct: 94 VHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVA 153
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W +I+ Y + EA++ F M G P V+ +++ G +
Sbjct: 154 WNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLV 213
Query: 387 SGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
G + +++ V ++ I MY++ G + A+++F E+ W TMI+ N +E
Sbjct: 214 KLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEG 273
Query: 445 LDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
+ LF Q +E D + VT L+ + A +H E + K V ++ + +
Sbjct: 274 IQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVT-QVCVMNALI 332
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ R + + +MP K D W T++ A
Sbjct: 333 AMYSRCNSIDTSFKIFDNMPEK-DVVSWNTMISA 365
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP--DLVTVLS 364
G + AR LFD + + V W +I G DEAL + M+++ D T S
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD------------ 412
++ C + L +GK + + + +V N+L++MYS C S
Sbjct: 78 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137
Query: 413 -ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
R++F + ++TVV+W T+IA + EA+ F MM++ ++P+ V+F+ V A +
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197
Query: 472 HAG 474
G
Sbjct: 198 SLG 200
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/595 (31%), Positives = 320/595 (53%), Gaps = 6/595 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I +V K+L F +M+ + + +T + C + + + +HG +V
Sbjct: 229 WNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVV 288
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS S++ V +++ MY++ + + A +F KM +RD+ SWN+M+ G + L
Sbjct: 289 KSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALE 348
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M ++VT T A +L LK VH+F I +G+ ++ + N ++ Y
Sbjct: 349 LLIEMLQTRKATNYVT---FTTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYG 405
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + A+ V + + + R V+WN++IGG + + ++ + + +G + T+
Sbjct: 406 KFGSMAAAQRVCKIMPD--RDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITI 463
Query: 262 VSLLSSCVCPEALV-QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V+LLS+ + P+ L+ G +H+H + GF+L+ V ++LI+MY++CGD++++ ++FD +
Sbjct: 464 VNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLA 523
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ +W A++S A G +EAL+L M G D + + G L+ G+
Sbjct: 524 NKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQ 583
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G + N V NA +DMY KCG I D + ++ SW +I+ A +G
Sbjct: 584 LHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGF 643
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
F +A + FH+M++L LRP+ VTF+++L AC+H G +++G YF+ M+ + V + H
Sbjct: 644 FQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCV 703
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR GKL EA +F+ MP+ +W +LL ACKIH N+E+ A RLFEL+
Sbjct: 704 CIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSS 763
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV +N+ A RW V N+R M+ + +KK P S V + + TF + D
Sbjct: 764 DDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGD 818
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 215/439 (48%), Gaps = 8/439 (1%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY+K ++ A +FDKMP+R+ ASWN ++ GF ++G+ +K + F +M G++
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 158 VMGLTQAAIHAKHLSLLK-SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
L A + ++ VH+ I G+ DV V + + Y + ++VF+ I
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
EE +VSW S++ G Y + ++ YR + DG + + +++ SC +
Sbjct: 121 EEP--NIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML 178
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G V I G D VSV N+LISM+ C I+ A +FD M +R +SW ++I+
Sbjct: 179 GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVH 238
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +++L F M D +T+ +++ CG + L G+ GL+ NV V
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCV 298
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
CN+L+ MYS+ G DA +F+ + E+ ++SW +M+A NG + AL+L +M++
Sbjct: 299 CNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRK 358
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
N VTF L AC + L+ + L+ ++ L + + + G+ G + A
Sbjct: 359 ATNYVTFTTALSACYNLETLKIVHAFVILLG----LHHNLIIGNALVTMYGKFGSMAAAQ 414
Query: 517 DFVQSMPIKSDAGIWGTLL 535
+ MP + D W L+
Sbjct: 415 RVCKIMPDR-DEVTWNALI 432
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 220/449 (48%), Gaps = 6/449 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM-IHGHI 80
WN+ + V KA+ F M ++ + P++ + AC + +H H+
Sbjct: 26 WNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEGAFQVHAHV 85
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K D+FV T+++ Y + +F ++ + ++ SW +++VG+A G +++V+
Sbjct: 86 IKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVM 145
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ +R G+ + + + ++ L V I G+D VSV N+ IS +
Sbjct: 146 SVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMF 205
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
C+ ++ A VF ++E R +SWNSII + + SL ++ M Y + D T
Sbjct: 206 GNCDSIEEASCVFDDMKE--RDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYIT 263
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +LL C + L GR +H + G + +V V N+L+SMYS+ G + A F+F M
Sbjct: 264 ISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMR 323
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R +SW +M++ + G+ AL L M + + VT + +S C LE K
Sbjct: 324 ERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYN---LETLKI 380
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ GL N+++ NAL+ MY K GS+ A+ + +P++ V+W +I G A N E
Sbjct: 381 VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKE 440
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQA 469
A++ F+ + E + N +T + +L A
Sbjct: 441 PNAAIEAFNLLREEGVPVNYITIVNLLSA 469
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 238/508 (46%), Gaps = 12/508 (2%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+ + ++RR++++ + N + ++C L D + + G ++KS + + V +++
Sbjct: 143 EVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLI 202
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
M+ CD ++ A +FD M +RD SWN++I G EK L F MR + D++
Sbjct: 203 SMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYI 262
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ L A++L + +H + G++++V VCN+ +S Y++ + AE VF +
Sbjct: 263 TISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKM 322
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E R ++SWNS++ + +L M+ + T + LS+C E L
Sbjct: 323 RE--RDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL-- 378
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
++VH+ I G ++ + N L++MY K G + +A+ + M DR V+W A+I G+A
Sbjct: 379 -KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHAD 437
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISG-CGQSGALELGKWFDNYACSGGLKDNVM 395
+ + A+ F + G + +T+++++S L+ G + G +
Sbjct: 438 NKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETF 497
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V ++LI MY++CG + + +F L K +W +++ A G EAL L +M
Sbjct: 498 VQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDG 557
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA--DLLGRKGKLK 513
+ ++ +F + L++G +L+ K E N Y A D+ G+ G++
Sbjct: 558 IHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIK---HGFESNDYVLNATMDMYGKCGEID 614
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + P W L+ A H
Sbjct: 615 DVFRIL-PQPRSRSQRSWNILISALARH 641
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 200/444 (45%), Gaps = 8/444 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WNS + VD +AL L M + N +TF AC L +
Sbjct: 323 RERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---K 379
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++H ++ ++ + +V MY K + A ++ MPDRD +WNA+I G A
Sbjct: 380 IVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNK 439
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH-LSLLKSVHSFGIHIGVDADVSVC 193
+ F +R G+ +++T++ L A + L +H+ + G + + V
Sbjct: 440 EPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQ 499
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ I+ YA+C DL + +F + + +WN+I+ + +++L M DG
Sbjct: 500 SSLITMYAQCGDLNTSNYIFDVLAN--KNSSTWNAILSANAHYGPGEEALKLIIKMRNDG 557
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D + + L +G+ +HS I +GF+ + V+N + MY KCG+ID
Sbjct: 558 IHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVF 617
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+ R++ SW +IS A+ G +A F M G PD VT +S++S C G
Sbjct: 618 RILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGG 677
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
++ G +F + + G+ + C +ID+ + G + +A +P T + W ++
Sbjct: 678 LVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSL 737
Query: 432 IAGCALNGEFVEALDLFHQMMELD 455
+A C ++G A ++ ELD
Sbjct: 738 LAACKIHGNLELARKAADRLFELD 761
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/511 (36%), Positives = 279/511 (54%), Gaps = 14/511 (2%)
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD++ + WN ++ F+ + VL + +R G+ D T L +A
Sbjct: 60 LFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKA------ 113
Query: 171 LSLLKSVHSFG-----IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
S L++ + F + G+D D V N+ +SA+A C + + +F IE + VVS
Sbjct: 114 FSKLRNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLF--IETAKKDVVS 171
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
W ++I GC + ++L + M G D TVVS+L + + GR VH +
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 286 HYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G + DV V + L+ MYSKCG D A +F+ M R VSW A+I+GY Q EAL
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEAL 291
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
++F M G P+ TV S ++ C Q G+L+ G+W Y L N + AL+DMY
Sbjct: 292 KVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMY 351
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKCG + +A +F LP K V WT MI G A+ G+ + +L+LF QM+ ++PN VTFL
Sbjct: 352 SKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFL 411
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
VL AC H G +++G F LM Y++ P ++HY CM DLLGR G+L+EA+ F++SMP+
Sbjct: 412 GVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPM 471
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ G+WG L C IH+ E+GE++ L +L+PH + Y+ +AN+Y+ +W+ AN+
Sbjct: 472 EPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANV 531
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R +MK V K P S + +NG F D
Sbjct: 532 RRLMKGKGVDKSPACSWIEVNGVIHEFIAFD 562
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 218/423 (51%), Gaps = 6/423 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ +R ++ L+ + R++ + + P+ TFP + KA +KL + Q + HIV
Sbjct: 72 WNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQF-YAHIV 130
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D FVQ ++V +A C +DC+ +LF + +DV SW A+I G + G + L
Sbjct: 131 KFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALE 190
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAY 200
F MR G++ D VTV+ + AA + + + VH F + G V DV V + + Y
Sbjct: 191 CFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC A VF E R +VSW ++I G +++ ++L ++ MI +G P+ +T
Sbjct: 251 SKCGYCDDAVKVFN--EMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQST 308
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V S L++C +L QGR +H + L+ + L+ MYSKCG +D A +F+ +
Sbjct: 309 VTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLP 368
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ WTAMI+G A +GD +L LF M + P+ VT L ++S C G ++ G +
Sbjct: 369 AKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLE 428
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
F C L+ NV ++D+ + G + +A + ++P E T W + +GC ++
Sbjct: 429 LFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIH 488
Query: 439 GEF 441
F
Sbjct: 489 KAF 491
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 322/599 (53%), Gaps = 14/599 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I+ +AL L+ RM + ++ ++ T+PF+ K+ +S + IH ++
Sbjct: 94 WNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVI 153
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAY---KLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
K F SD++V +++ +Y K L C++ K+F++MP+RD+ SWN+MI G+ + +
Sbjct: 154 KLRFVSDVYVCNSLISLYMK---LGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFR 210
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWI 197
L LF M G + D + M A H ++ K +H + ++ DV V + +
Sbjct: 211 SLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSIL 270
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS-LNFYRHMIYDGFRP 256
Y+K ++ AE +F+ I + R +V+WN +IG + D+ L F + +G +P
Sbjct: 271 DMYSKYGEVSYAERIFKCIIQ--RNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQP 328
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
DV T+++LL +C A+++GR +H + + GF + + LI MY + G + SA +F
Sbjct: 329 DVITLINLLPAC----AILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIF 384
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + ++ +SW ++I+ Y Q G AL LF + + +PD T+ S++ +S +L
Sbjct: 385 DRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLS 444
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ Y N ++ N+L+ MY+ CG + DAR+ F + K VVSW ++I A
Sbjct: 445 EGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYA 504
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
++G ++ LF +M+ + PN+ TF ++L AC+ +G +++GW YF M + Y ++P +
Sbjct: 505 VHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 564
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY M DL+GR G A F++ MP A IWG+LL A + H +I + E+ A ++F+
Sbjct: 565 EHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFK 624
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+E + YV + N+YA RW+ V ++ +M+ + + +S V KT T D
Sbjct: 625 MEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNGD 683
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 195/383 (50%), Gaps = 8/383 (2%)
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
+A ++ A +LFD+M D WN MI GF G + L L+ M G++AD T
Sbjct: 70 FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ ++ L K +H+ I + +DV VCN+ IS Y K AE VF + E
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R +VSWNS+I G + SL ++ M+ GF+PD + +S L +C + G+
Sbjct: 190 --RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGK 247
Query: 279 LVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H H + + DV V+ +++ MYSK G++ A +F + R V+W +I YA+
Sbjct: 248 ELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARN 307
Query: 338 GDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+ +A F M E G PD++T+++++ C A+ G+ YA G ++++
Sbjct: 308 SRVTDAFLCFQKMSEQNGLQPDVITLINLLPAC----AILEGRTIHGYAMRRGFLPHIVL 363
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
ALIDMY + G + A +F + EK ++SW ++IA NG+ AL+LF ++ + L
Sbjct: 364 DTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSL 423
Query: 457 RPNRVTFLAVLQACTHAGFLEKG 479
P+ T ++L A + L +G
Sbjct: 424 LPDSTTIASILPAYAESLSLSEG 446
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 200/406 (49%), Gaps = 9/406 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I + + ++L+LF+ M K +P+ + AC+ + + +H
Sbjct: 192 IVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHC 251
Query: 79 HIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
H V+S + D+ V T+++DMY+K + A ++F + R++ +WN +I +A+ +
Sbjct: 252 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVT 311
Query: 138 KVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
F M G+Q D +T++ L A + +++H + + G + +
Sbjct: 312 DAFLCFQKMSEQNGLQPDVITLINLLPACAILEG----RTIHGYAMRRGFLPHIVLDTAL 367
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I Y + LK AE++F I E + ++SWNSII K +L ++ + P
Sbjct: 368 IDMYGEWGQLKSAEVIFDRIAE--KNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLP 425
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TT+ S+L + +L +GR +H++ + + + ++N+L+ MY+ CGD++ AR F
Sbjct: 426 DSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCF 485
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + + VSW ++I YA G ++ LF M A+ P+ T S+++ C SG ++
Sbjct: 486 NHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVD 545
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
G ++F++ G+ + ++D+ + G+ A+ +P
Sbjct: 546 EGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMP 591
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 301/590 (51%), Gaps = 39/590 (6%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD--RLDCAYKLFDKMPD 117
+ +AC ++ + IH ++ + SD F + +V A + LD K+ + +
Sbjct: 60 LLEACTSMAKM---KEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKS 176
+V SWN I G+ + + L+ NM G D T L +
Sbjct: 117 LNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANE 176
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+ I +G D+D+ V N I C +L A +F E +R +VSWNSII G
Sbjct: 177 ILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFD--ESCVRDLVSWNSIINGYVRC 234
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D++ + Y M PD T++ ++S+ E L GR +H G +L V +
Sbjct: 235 GLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLA 294
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD--------------- 341
N L+ MY KC +I++A+ LF+ M +T VSWT M+ GYA+ G L+
Sbjct: 295 NALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVV 354
Query: 342 ----------------EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
EAL LF M+A+ PD +TV++ +S C Q GAL++G W +Y
Sbjct: 355 LWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYV 414
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
L NV + AL+DMY+KCG+I A ++F +P + ++WT +I G AL+G+ A+
Sbjct: 415 DKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAI 474
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
F +M+ + L P+ +TF+ VL AC H G +++G YF MT Y ++P+L HYSC+ DL
Sbjct: 475 SYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDL 534
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPY 565
LGR G L+EA + ++SMP + DA +WG L +IH N+ +GE A +L EL+PH Y
Sbjct: 535 LGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIY 594
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +AN+Y W+ +R MM+ V+K PG S + +NG F + D
Sbjct: 595 VLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRD 644
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 229/466 (49%), Gaps = 32/466 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN IR V+ A+LL+R M +K P+N T+P + K CA S + I GH+
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++ F SD+FV ++ + C L A KLFD+ RD+ SWN++I G+ + G ++
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L+Y M + + D VT++G+ A+ ++L+L + +H +G++ V + N + Y
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMY 301
Query: 201 AKCNDLKMAELVFRG---------------------IEEGLRT--------VVSWNSIIG 231
KC +++ A+++F +E +R VV WN++IG
Sbjct: 302 IKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIG 361
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + ++L + M PD TVV+ LS+C AL G +H + + +
Sbjct: 362 GFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM 421
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V++ L+ MY+KCG+I A +F+ M R ++WTA+I G A G A+ F M
Sbjct: 422 NVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMI 481
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G VPD +T + ++S C G ++ G+ +F G+ + + L+D+ + G +
Sbjct: 482 SIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFL 541
Query: 411 GDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+A EL ++P E V W + G ++G +++ELD
Sbjct: 542 EEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELD 587
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/597 (32%), Positives = 306/597 (51%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + + LF M I P+ T+ I CA + +H I+
Sbjct: 286 WNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAII 345
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S++FV ++DMYAK L A K F+ M RD SWNA+IVG+ Q
Sbjct: 346 KKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFS 405
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M L GI D V++ + A + K L + H + +G++ ++ ++ I Y+
Sbjct: 406 LFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYS 465
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+K A + + E R+VVS N++I G + +S+N M G +P T
Sbjct: 466 KCGDIKDAHKTYSSMPE--RSVVSVNALIAGYALKNT-KESINLLHEMQILGLKPSEITF 522
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARFLFDGMC 320
SL+ C ++ G +H + G + T L+ MY + A LF
Sbjct: 523 ASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFS 582
Query: 321 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ V WTA+ISG+ Q D AL L+ M PD T ++++ C +L G+
Sbjct: 583 SLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGR 642
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+ G + + +AL+DMY+KCG + + ++F L +K V+SW +MI G A N
Sbjct: 643 EIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKN 702
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G AL +F +M + + P+ VTFL VL AC+HAG++ +G F++M Y + P ++H
Sbjct: 703 GYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDH 762
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM DLLGR G LKEA +F+ + ++ +A IW LL AC+IH + + G+ A +L ELE
Sbjct: 763 YACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELE 822
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P S++PYV ++N+YA G WD +LR M + ++K PG S + + +T F D
Sbjct: 823 PQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGD 879
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 254/518 (49%), Gaps = 10/518 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I +AL F +M K+ ++ + T + A A L+ + ++H H +
Sbjct: 185 WNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAI 244
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S I+V +++++MY KC D A ++FD + +++ WNAM+ ++Q GFL V+
Sbjct: 245 KQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVME 304
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M GI D T + ++L + + +HS I +++ V N I YA
Sbjct: 305 LFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYA 364
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K LK A F + R +SWN+II G + + + +R MI DG PD ++
Sbjct: 365 KAGALKEAGKHFEHMT--YRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSL 422
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C + L G+ H + G + ++ ++LI MYSKCGDI A + M +
Sbjct: 423 ASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPE 482
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R+ VS A+I+GYA K + E++ L M+ G P +T S+I C S + LG
Sbjct: 483 RSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQI 541
Query: 382 DNYACSGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNG 439
GL + + +L+ MY + DA LF K++V WT +I+G N
Sbjct: 542 HCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNE 601
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
AL+L+ +M + ++ P++ TF+ VLQAC L G +L ++ +L+
Sbjct: 602 CSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSL---IFHTGFDLDEL 658
Query: 500 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
S + D+ + G +K ++ + + K D W +++
Sbjct: 659 TSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMI 696
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 233/512 (45%), Gaps = 44/512 (8%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ QWN ++ + + + L + + P+ TF ACAKL + + +H
Sbjct: 13 VRQWNWRV-QGTKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAMIVGFAQMGFL 136
++KS S F Q ++ +YAKC+ L CA +F P SW A+I G+ Q G
Sbjct: 72 CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131
Query: 137 EKVLCLFYNMRLVGI--QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L +F MR + Q VTV+
Sbjct: 132 HEALHIFDKMRNSAVPDQVALVTVL----------------------------------- 156
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+AY L A +F+ + +R VV+WN +I G ++++L F+ M G
Sbjct: 157 ---NAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGV 213
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+ +T+ S+LS+ AL G LVH+H I GF+ + V ++LI+MY KC D AR
Sbjct: 214 KSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQ 273
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+FD + + + W AM+ Y+Q G L + LF M + G PD T S++S C
Sbjct: 274 VFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEY 333
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LE+G+ + N+ V NALIDMY+K G++ +A + F + + +SW +I G
Sbjct: 334 LEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVG 393
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A LF +M+ + P+ V+ ++L AC + LE G + L K+ +
Sbjct: 394 YVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKL-GLET 452
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
L S + D+ + G +K+A SMP +S
Sbjct: 453 NLFAGSSLIDMYSKCGDIKDAHKTYSSMPERS 484
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 205/385 (53%), Gaps = 5/385 (1%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVASWNAMIVGFAQMGFLEKVLCLFYN 145
D T+++ Y +LD A +LF +MP R+V +WN MI G A+ E+ L F+
Sbjct: 148 DQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQ 207
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
M G+++ T+ + A L+ VH+ I G ++ + V ++ I+ Y KC
Sbjct: 208 MSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQM 267
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
A VF I + + ++ WN+++G + + + + MI G PD T S+L
Sbjct: 268 PDDARQVFDAISQ--KNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSIL 325
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
S+C C E L GR +HS I F ++ V N LI MY+K G + A F+ M R +
Sbjct: 326 STCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHI 385
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SW A+I GY Q+ A LF M G VPD V++ S++S CG LE G+ F +
Sbjct: 386 SWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLS 445
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
GL+ N+ ++LIDMYSKCG I DA + + ++PE++VVS +IAG AL E++
Sbjct: 446 VKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNT-KESI 504
Query: 446 DLFHQMMELDLRPNRVTFLAVLQAC 470
+L H+M L L+P+ +TF +++ C
Sbjct: 505 NLLHEMQILGLKPSEITFASLIDVC 529
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 4/224 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+I W + I + + AL L+R M+ N+I P+ TF + +ACA LS + IH
Sbjct: 586 SIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIH 645
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFAQMGFL 136
I + F D + +VDMYAKC + + ++F+++ +DV SWN+MIVGFA+ G+
Sbjct: 646 SLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYA 705
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNT 195
+ L +F M I D VT +G+ A HA + + + + + G++ V
Sbjct: 706 KCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYAC 765
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC-TYGDK 238
+ + LK AE +E ++ W +++G C +GD+
Sbjct: 766 MVDLLGRWGFLKEAEEFIDKLEVEPNAMI-WANLLGACRIHGDE 808
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 202/605 (33%), Positives = 328/605 (54%), Gaps = 88/605 (14%)
Query: 41 LFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
LF+ M ++ DI+PN + + K+ S + H++KS + D +V+ ++ +Y
Sbjct: 75 LFKHMLQHCDIKPNASFYSVMMKSAGS-----ESMLFLAHVLKSGYDRDHYVRNGILGIY 129
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
AK ++ A KLFD+MPDR VA WN MI G+ + G E+ LF+ VM
Sbjct: 130 AKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH-------------VM 176
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
G + + +V T I+ +AK +LK A + F + E
Sbjct: 177 GDQE----------------------ISRNVITWTTMITGHAKKGNLKTARMYFDKMPE- 213
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVC------PE 272
R+VVSWN+++ G G ++++ + M+ G +PD TT +++SSC E
Sbjct: 214 -RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSE 272
Query: 273 ALVQ-------------------------GRLVHSHGIH-----YGFDLDVSVINTLISM 302
++V+ G L +H I Y + V N +IS
Sbjct: 273 SIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVP-WNAMISA 331
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV--PDLV 360
Y++ GD+ SA+ LFD M R VSW +MI+GY Q G+ +A++LF M ++ + PD V
Sbjct: 332 YARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEV 391
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++S+ S CG G L LG W + ++ ++ V N+LI+MYS+CGS+ DA +F +
Sbjct: 392 TMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEM 451
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+ +VS+ T+I+G A +G +E+++L +M E + P+R+T++A+L AC+HAG L++G
Sbjct: 452 ATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQ 511
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
F + P+++HY+CM D+LGR G+L+EA+ +QSMP++ AGI+G+LL A I
Sbjct: 512 RLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSI 566
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+ +E+GE A +LF++EPH++ Y ++NIYA GRW +R M++ VKK G S
Sbjct: 567 HKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLS 626
Query: 601 LVHIN 605
+ N
Sbjct: 627 WLEHN 631
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKL 67
+K+ + T++ WNS I E+ KA+ LF M ++ +P+ +T + AC L
Sbjct: 345 FDKMPQRDTVS-WNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHL 403
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ + + I V ++++MY++C + A +F +M RD+ S+N +I
Sbjct: 404 GELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLI 463
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
GFA+ G + + L M+ GI+ D +T + + A HA
Sbjct: 464 SGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHA 504
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I + +++ L +MK++ IEP+ +T+ I AC+ Q +
Sbjct: 459 YNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQ----RLF 514
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
+S + D+ M+DM + RL+ A KL MP
Sbjct: 515 ESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMP 549
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 258/445 (57%), Gaps = 1/445 (0%)
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
AA L + H+ + + + +D V N I+ Y+ CN A LV
Sbjct: 101 SAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASD 160
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VVSWN+II G G + +L + M + R D T++++L +C A+ G L H+
Sbjct: 161 VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHA 220
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+ GF+++ + ++L+SMY+KCG ++ AR +F+ M +R V WT+MI+G Q G E
Sbjct: 221 LVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKE 280
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A+ LF M+ AG D T+ +++S CGQ GAL+LG++ Y GL + V N+LID
Sbjct: 281 AVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLID 340
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRV 461
MYSKCG + A ++F+ L ++ V +WT MI G A+NG VEALDLF QM D + PN V
Sbjct: 341 MYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEV 400
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
FL VL AC+H G +E+G+ +F+ M+KVY + P + HY CM DLLGR L EA F++
Sbjct: 401 IFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKD 460
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MP+ D +W +LL AC+ + + EY A R+ +LEP +V ++N+YA RW V
Sbjct: 461 MPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDV 520
Query: 582 ANLRTMMKRNQVKKFPGQSLVHING 606
N+RT M ++ K PG S + ++G
Sbjct: 521 NNVRTGMGNSRTSKKPGCSFIEVDG 545
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 132/254 (51%), Gaps = 3/254 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+S + WN+ I + +KAL F +M K + + +T + ACA+ +
Sbjct: 158 ASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 217
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
H +V + F + ++ +++V MYAKC ++ A ++F++MP+R+V W +MI G Q G
Sbjct: 218 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGR 277
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + LF +M++ G++AD T+ + + L L + +H++ G+ ++SV N+
Sbjct: 278 FKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNS 337
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGF 254
I Y+KC D+ A +F G+ + R V +W +I G ++L+ + M D
Sbjct: 338 LIDMYSKCGDVNKAYQIFHGLTK--RDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKV 395
Query: 255 RPDVTTVVSLLSSC 268
P+ + +L++C
Sbjct: 396 MPNEVIFLGVLTAC 409
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--K 423
IS + +L++G F + L + V NALI+MYS C AR + + P
Sbjct: 100 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWAS 159
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---- 479
VVSW T+IAG G +AL FHQM + +R + VT L VL AC G ++ G
Sbjct: 160 DVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCH 219
Query: 480 ------------------------WGYFNLMTKVYQVNPELNHYSCMADLLG--RKGKLK 513
G +V+ PE N + + G + G+ K
Sbjct: 220 ALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFK 279
Query: 514 EALDFVQSMPI---KSDAGIWGTLLCACKIHRNIEIGEYV 550
EA+D + M I K+D T++ +C +++G Y+
Sbjct: 280 EAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYL 319
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 321/599 (53%), Gaps = 16/599 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + AL L++RM D++PN + + + ACA + + IH I
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRIS 148
Query: 82 KSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ D+ ++ +++ MYAKC L+ A +LF++M R V+SWNAMI +AQ G E+ +
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL---KSVHSFGIHIGVDADVSVCNTWI 197
L+ +M + F +V+ +L LL + +H+ G + D+S+ N +
Sbjct: 209 RLYEDMDVEPSVRTFTSVLSA------CSNLGLLDQGRKIHALISSRGTELDLSLQNALL 262
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ YA+C L A +F+ + R VVSW+++I D FD+++ FY M +G RP+
Sbjct: 263 TMYARCKCLDDAAKIFQRLPR--RDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPN 320
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T S+L +C L GR VH + G+ + + L+ +Y+ G +D AR LFD
Sbjct: 321 YYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFD 380
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS-MISGCGQSGALE 376
+ +R WT +I GY+++G L L+ M+ +VP + S +IS C GA
Sbjct: 381 QIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFA 440
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+ + + G+ + ++ +L++MYS+ G++ AR++F + + ++WTT+IAG A
Sbjct: 441 DARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYA 500
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+GE AL L+ +M P+ +TF+ VL AC+HAG E+G F + Y ++P +
Sbjct: 501 KHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNI 560
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HYSC+ DLL R G+L +A + + +MP++ + W +LL A +IH++++ + A ++ +
Sbjct: 561 AHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITK 620
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P A YV ++N++A+ G G+A++R M VKK G S + + + F V D
Sbjct: 621 LDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGD 679
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 235/505 (46%), Gaps = 23/505 (4%)
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
A + D + IH I + +++F+ +V Y KC + A FD + ++ S
Sbjct: 33 ALRQCQDLESVRQIHDRISGAAS-ANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYS 91
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS-FG 181
W +M+ +AQ G L L+ M L + TV+G A K L K++HS
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLG---ACASIKALEEGKAIHSRIS 148
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
G+ DV + N+ ++ YAKC L+ A+ +F + R+V SWN++I F++
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSG--RSVSSWNAMIAAYAQSGHFEE 206
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
++ Y M P V T S+LS+C L QGR +H+ G +LD+S+ N L++
Sbjct: 207 AIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLT 263
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY++C +D A +F + R VSW+AMI+ +A+ DEA+ + M+ G P+ T
Sbjct: 264 MYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYT 323
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S++ C G L G+ + G K ++ AL+D+Y+ GS+ +AR LF +
Sbjct: 324 FASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 383
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP-NRVTFLAVLQACTHAG-FLEKG 479
+ WT +I G + G L+L+ +M P ++ + V+ AC G F +
Sbjct: 384 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADAR 443
Query: 480 WGYFNLMTKVYQVNPELNHY---SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
+ ++ + + ++ + + + ++ R G L+ A M + D W TL+
Sbjct: 444 QAHSDI-----EADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIA 497
Query: 537 ACKIH--RNIEIGEYVAYRLFELEP 559
H + +G Y L EP
Sbjct: 498 GYAKHGEHGLALGLYKEMELEGAEP 522
>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
Length = 576
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/513 (35%), Positives = 284/513 (55%), Gaps = 11/513 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ IR + H A+ L+R M + PN TFPF+ KAC+ L+D + IH H
Sbjct: 67 YNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAA 126
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+D+FV T ++D+Y +C R A +F KMP RDV +WNAM+ G+A G +
Sbjct: 127 AVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 186
Query: 142 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLK--SVHSFGIHIGVDAD---VSVCNT 195
+M+ G++ + T++ L + A+H +L + SVH++ + +D + V +
Sbjct: 187 HLLDMQDRGGLRPNASTLVSLLP--LLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTA 244
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF- 254
+ YAKC L A VF G+ +R V+W+++IGG D+ ++ N ++ M+ +G
Sbjct: 245 LLDMYAKCKHLVYACRVFHGMT--VRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMC 302
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
T+V S L C L G +H+ G D++ N+L+SMY+K G I+ A
Sbjct: 303 FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATM 362
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LFD + + +S+ A++SGY Q G +EA +F M+A PD+ T++S+I C A
Sbjct: 363 LFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAA 422
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+ G+ GL +CN+LIDMY+KCG I +R++F +P + +VSW TMIAG
Sbjct: 423 LQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG 482
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
++G EA LF M P+ VTF+ ++ AC+H+G + +G +F+ MT Y + P
Sbjct: 483 YGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILP 542
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
+ HY CM DLL R G L EA F+QSMP+K+D
Sbjct: 543 RMEHYICMVDLLARGGFLDEAYQFIQSMPLKAD 575
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 202/413 (48%), Gaps = 12/413 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ + + H A+ M+ + + PN T + A+ +H +
Sbjct: 168 WNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYC 227
Query: 81 VKSPF---WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+++ + + T ++DMYAKC L A ++F M R+ +W+A+I GF +
Sbjct: 228 LRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMT 287
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK---SVHSFGIHIGVDADVSVCN 194
+ LF +M + G+ F++ + A L+ L+ +H+ G+ AD++ N
Sbjct: 288 EAFNLFKDMLVEGMC--FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ +S YAK + A ++F E ++ +S+ +++ G K +++ ++ M
Sbjct: 346 SLLSMYAKAGLINEATMLFD--EIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD+ T+VSL+ +C AL GR H I G L+ S+ N+LI MY+KCG ID +R
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+FD M R VSW MI+GY G EA LF +M+ G PD VT + +I+ C SG
Sbjct: 464 VFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGL 523
Query: 375 LELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
+ GK WFD G+ + ++D+ ++ G + +A + ++P K V
Sbjct: 524 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADV 576
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 205/443 (46%), Gaps = 9/443 (2%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+L A ++FD++P D ++NA+I ++ G + L+ +M + + T + +
Sbjct: 48 QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLK 107
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A L +++H+ +G+ D+ V I Y +C A VF + +R V
Sbjct: 108 ACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP--MRDV 165
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+WN+++ G + ++ M G RP+ +T+VSLL AL QG VH+
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 283 HGIHYGFDLD---VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
+ + D + V + L+ MY+KC + A +F GM R V+W+A+I G+
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285
Query: 340 LDEALRLFFAMEAAGE-VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ EA LF M G +V S + C L +G G+ ++ N
Sbjct: 286 MTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+L+ MY+K G I +A LF + K +S+ +++G NG+ EA +F +M +++P
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQP 405
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ T ++++ AC+H L+ G + + + E + + + D+ + G++ +
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVI-IRGLALETSICNSLIDMYAKCGRIDLSRQV 464
Query: 519 VQSMPIKSDAGIWGTLLCACKIH 541
MP + D W T++ IH
Sbjct: 465 FDKMPAR-DIVSWNTMIAGYGIH 486
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 7/237 (2%)
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + AR +FD + ++ A+I Y+ +G A+ L+ +M P+ T ++
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C L G+ +A + GL ++ V ALID+Y +C G A +F +P + VV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
+W M+AG A +G + A+ M + LRPN T +++L G L +G
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 486 MTKVY--QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD----AGIWGTLLC 536
+ Y Q ++ + + D+ + L A M ++++ A I G +LC
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLC 283
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 294/577 (50%), Gaps = 35/577 (6%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H +++ S + ++ +Y L A LF + V +W ++I F
Sbjct: 24 AKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
K L F MR G D + ++ L +SVH F + +G+D D+
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 193 CNTWISAYAKC-------------------------NDLKMAELVFR-GIEEGLRT---- 222
N ++ YAK D+K + GI+ R
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 223 ----VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
VVS+N+II G ++D+L R M +PD T+ S+L +++G+
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H + I G D DV + ++L+ MY+K I+ + +F + R +SW ++++GY Q G
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+EALRLF M A P V S+I C L LGK Y GG N+ + +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+DMYSKCG+I AR++F + VSWT +I G AL+G EA+ LF +M ++P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N+V F+AVL AC+H G +++ WGYFN MTKVY +N EL HY+ +ADLLGR GKL+EA +F
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+ M ++ +W TLL +C +H+N+E+ E VA ++F ++ + YV M N+YA GRW
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A LR M++ ++K P S + + KT F D
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 233/484 (48%), Gaps = 44/484 (9%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K +S + W S IR D++ KAL F M+ + P++ FP + K+C + D
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC-------------DRL------------- 105
+ + +HG IV+ D++ +++MYAK D +
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 106 ----------DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
D ++F+ MP +DV S+N +I G+AQ G E L + M ++ D
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 156 VTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
T+ + I ++++ ++ K +H + I G+D+DV + ++ + YAK ++ +E VF
Sbjct: 243 FTLSSVL--PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
+ R +SWNS++ G +++++L +R M+ +P S++ +C
Sbjct: 301 SRLY--CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
L G+ +H + + GF ++ + + L+ MYSKCG+I +AR +FD M VSWTA+I G
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKD 392
+A G EA+ LF M+ G P+ V +++++ C G + E +F++ GL
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ A+ D+ + G + +A + E T W+T+++ C+++ A + ++
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 452 MELD 455
+D
Sbjct: 539 FTVD 542
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 290/518 (55%), Gaps = 18/518 (3%)
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
YK DK +V SWN++I A+ G + L F ++R +G+ + ++
Sbjct: 1972 YKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSAL 2028
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L + H G + D+ V + I Y+KC LK A +F I LR VVSW S
Sbjct: 2029 CDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP--LRNVVSWTS 2086
Query: 229 IIGGCTYGDKFDDSLNFYRHM------IYDG--FRPDVTTVVSLLSSC--VCPEALVQGR 278
+I G ++ D++L ++ + DG D +VS+LS+C V + + +G
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG- 2145
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH + GFD + V NTL+ Y+KCG ++ +FD M ++ +SW +MI+ YAQ G
Sbjct: 2146 -VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 2204
Query: 339 DLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
EAL +F M G + VT+ +++ C +GAL GK + L+ NV V
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
++IDMY KCG + A++ F + EK V SWT M+AG ++G EALD+F++M+ ++
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN +TF++VL AC+HAG +E+GW +FN M Y + P + HY CM DL GR G L EA +
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
++ M +K D +WG+LL AC+IH+N+++GE A +LFEL+P + YV ++N+YA GR
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 2444
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W V +R +MK Q+ K PG SLV + G+ F V D
Sbjct: 2445 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGD 2482
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 190/379 (50%), Gaps = 33/379 (8%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
K+ L+ +H+ I G+ D + I Y+ + A L+F I+ +WN
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP--CTFTWNL 95
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
II T + +L Y++M+ G D T ++ +C ++ G++VH I YG
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 289 FDLDVSVINTLISMYSKCG-------------------------------DIDSARFLFD 317
F DV V N LI Y KCG D+ AR +FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + VSWTAMI+GY + +EAL LF M+A P+ T++S+I C + G L L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ +YA ++ V + ALIDMYSKCGSI DA E+F +P K++ +W +MI +
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL+LF +M ++++P+ +TF+ VL AC H +++G YF MT+ Y + P
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 498 HYSCMADLLGRKGKLKEAL 516
HY CM +L R L EA
Sbjct: 396 HYECMTELYARSNNLDEAF 414
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 228/463 (49%), Gaps = 13/463 (2%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
S+L K S ++ WNS I + ++ +AL F ++K + P +FP K+
Sbjct: 1965 SNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKS 2024
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C+ L D + +M H F +D+FV + ++DMY+KC +L A LFD++P R+V SW
Sbjct: 2025 CSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSW 2084
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLV--------GIQADFVTVMGLTQAAIHAKHLSLLK 175
+MI G+ Q + L LF + + D V ++ + A + +
Sbjct: 2085 TSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 2144
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
VH F + G D + V NT + AYAKC +++ VF +EE + +SWNS+I
Sbjct: 2145 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE--KDDISWNSMIAVYAQ 2202
Query: 236 GDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
++L + M+ + G R + T+ ++L +C AL G+ +H I + +V
Sbjct: 2203 SGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVC 2262
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V ++I MY KCG ++ A+ FD M ++ SWTAM++GY G EAL +F+ M AG
Sbjct: 2263 VGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG 2322
Query: 355 EVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
P+ +T +S+++ C +G +E G WF+ ++ + ++D++ + G + +A
Sbjct: 2323 VKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEA 2382
Query: 414 RELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
L + K V W +++ C ++ ++ ELD
Sbjct: 2383 YNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELD 2425
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 151/340 (44%), Gaps = 32/340 (9%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
F+ + C +F + + IH I++S +D + ++ +Y+ R+ A LF ++ +
Sbjct: 32 FLLQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+WN +I G E+ L L+ NM GI AD T + +A + + L K VH
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG---------------------IE 217
I G DV V N I Y KC + A VF ++
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 218 EGLR--------TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
E R VVSW ++I G + +++L ++ M + P+ T+VSL+ +C
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
L GR +H + I ++ V + LI MYSKCG I A +F+ M ++ +W +
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
MI+ G EAL LF ME PD +T + ++ C
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCAC 368
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 42/327 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + +AL+L++ M I + TFPF+ KAC +++HG ++
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM-------------------------- 115
K F D+FVQ ++D Y KC A K+F+KM
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 116 -----PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
P ++V SW AMI G+ + E+ L LF M+ I + T++ L +A
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L+L + +H + I ++ V + I Y+KC +K A VF + +++ +WNS+I
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR--KSLPTWNSMI 330
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGI 285
++LN + M +PD T + +L +CV + + +G R+
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ---- 386
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSA 312
HYG + +Y++ ++D A
Sbjct: 387 HYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 131/296 (44%), Gaps = 35/296 (11%)
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R +H+ I G D + LI +YS G I A LF + + +W +I
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G ++AL L+ M G D T +I C +++LGK G +V V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 398 NALIDMYSKCG----------------------------SIGD---ARELFYALPEKTVV 426
N LID Y KCG S GD AR +F +P K VV
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SWT MI G N + EAL+LF +M ++ PN T +++++ACT G L G G +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 487 TK-VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
K ++ L + + D+ + G +K+A++ ++MP KS W +++ + +H
Sbjct: 284 IKNCIEIGVYLG--TALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVH 336
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W + I + + +AL LF+RM+ +I PN T + KAC ++ +
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH + +K+ +++ T ++DMY+KC + A ++F+ MP + + +WN+MI G
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
++ L LF M V ++ D +T +G+ A +H K++
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 11/225 (4%)
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
GL ++ ++ LI +YS G I A LFY + +W +I +NG +AL L
Sbjct: 53 SGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALML 112
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
+ M+ + ++ TF V++ACT+ ++ G + K Y + ++ + + D
Sbjct: 113 YKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFVQNNLIDFYF 171
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV-AYRLF-ELEPHSAAPY 565
+ G + AL + M +++ W T++ I G+ A R+F E+ + +
Sbjct: 172 KCGHTRFALKVFEKMRVRNVVS-WTTVISGL-----ISCGDLQEARRIFDEIPSKNVVSW 225
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
M N Y + + L M+ + FP + + K CT
Sbjct: 226 TAMINGYIRNQQPEEALELFKRMQAENI--FPNEYTMVSLIKACT 268
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 193/583 (33%), Positives = 299/583 (51%), Gaps = 2/583 (0%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N+ +A LF R+ E N F + K + +++HG ++K + S+ F+
Sbjct: 25 NKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIG 84
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
T ++D Y+ + A ++FD++ +D+ SW MI +A+ + L F MR+ G +
Sbjct: 85 TALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFK 144
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ T G+ +A + ++ K+VH + + D+ V + Y +C D A
Sbjct: 145 PNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRA 204
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + V+ W+ +I + + +L + M P+ T S+L + E
Sbjct: 205 FGDMPKN--DVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIE 262
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+L + +H H + G DV V N L++ Y+KCG I+ + LF+ + DR VSW +I
Sbjct: 263 SLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIV 322
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y Q GD + AL LF M VT S++ C ALELG
Sbjct: 323 SYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQ 382
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+V V NALIDMY+KCGSI DAR +F L + VSW +I G +++G VEA+ +F+ M
Sbjct: 383 DVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMK 442
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
E +P+ +TF+ VL AC++ G L++G YF M + Y + P + HY+CM L+GR G L
Sbjct: 443 ETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNL 502
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIY 572
+A+ F++ +P + IW LL AC IH ++E+G A R+ ELEP A +V ++NIY
Sbjct: 503 DQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIY 562
Query: 573 ALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A RW VA +R MKR VKK PG S + G FTV D
Sbjct: 563 ARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVAD 605
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 224/444 (50%), Gaps = 4/444 (0%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W I + + +AL F +M+ +PNN TF + KAC L +F +
Sbjct: 109 SKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKT 168
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H ++K+ + D++V ++++Y +C D A++ F MP DV W+ MI FAQ G
Sbjct: 169 VHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQ 228
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
EK L +F MR + + T + QA+ + L L K++H + G+ DV V N
Sbjct: 229 SEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNA 288
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAKC ++ + +F + + R VSWN+II + +L+ + +M+ +
Sbjct: 289 LMACYAKCGCIEQSMELFEALSD--RNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQ 346
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
T S+L +C AL G VH + DV+V N LI MY+KCG I ARF+
Sbjct: 347 ATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFM 406
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + R +VSW A+I GY+ G EA+++F M+ PD +T + ++S C +G L
Sbjct: 407 FDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRL 466
Query: 376 ELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
+ GK +F + G++ + ++ + + G++ A + +P E +V+ W ++
Sbjct: 467 DEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLG 526
Query: 434 GCALNGEFVEALDLFHQMMELDLR 457
C ++ + +++EL+ R
Sbjct: 527 ACVIHNDVELGRISAQRVLELEPR 550
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 210/435 (48%), Gaps = 12/435 (2%)
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD---FVTVMGLTQAAIH 167
+FD+MP+R+ S+ +I G+AQ + LF + G + + F TV+ L +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLL---VS 58
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ L + VH + +G ++ + I AY+ + MA VF I + +VSW
Sbjct: 59 MEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISS--KDMVSWT 116
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+I D F ++L F+ M GF+P+ T +L +C+ + G+ VH +
Sbjct: 117 GMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKT 176
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
++ D+ V L+ +Y++CGD D A F M + W+ MIS +AQ G ++AL +F
Sbjct: 177 NYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIF 236
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M A +P+ T S++ +L+L K +A GL +V V NAL+ Y+KC
Sbjct: 237 CQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKC 296
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G I + ELF AL ++ VSW T+I G+ AL LF M+ ++ VT+ ++L
Sbjct: 297 GCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSIL 356
Query: 468 QACTHAGFLEKGWGYFNLMTK-VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
+AC LE G L K +Y + + + + D+ + G +K+A F+ M
Sbjct: 357 RACATLAALELGLQVHCLTAKTIYGQDVAVGN--ALIDMYAKCGSIKDA-RFMFDMLDLR 413
Query: 527 DAGIWGTLLCACKIH 541
D W ++C +H
Sbjct: 414 DKVSWNAIICGYSMH 428
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 294/559 (52%), Gaps = 31/559 (5%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
++F ++ A LD LF M RD S+NA+I GF+ G + + L++ +
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 148 LVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
G ++ +T+ + AA +L + H + +G + V + + YAK
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190
Query: 206 LKMAELVF---------------------RGIEEGLRTV--------VSWNSIIGGCTYG 236
+ A+ VF + +EE R ++W +++ G T
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+LNF+R M + G D T S+L++C AL QG+ +H++ I +D +V V
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+ L+ MYSKC I A F M + +SWTA+I GY Q G +EA+R+F M+ G
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
PD T+ S+IS C +LE G F A GL + V NAL+ +Y KCGSI DA L
Sbjct: 371 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F + VSWT ++ G A G E +DLF +M+ D++P+ VTF+ VL AC+ AGF+
Sbjct: 431 FDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFV 490
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
EKG YF+ M K + + P +HY+CM DL R G+LKEA +F++ MP+ DA WGTLL
Sbjct: 491 EKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
AC++ ++EIG++ A L E++P + A YV + +++A G W+ VA LR M+ QVKK
Sbjct: 551 ACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKE 610
Query: 597 PGQSLVHINGKTCTFTVED 615
PG S + K F+ +D
Sbjct: 611 PGCSWIKYKNKVHIFSADD 629
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 207/443 (46%), Gaps = 39/443 (8%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK------ 101
+ + P+ +T + A + L D + H I++ F + FV + +V MYAK
Sbjct: 134 SSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGD 193
Query: 102 -------------------------CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
C ++ A +LF+ M DRD +W M+ GF Q G
Sbjct: 194 AKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLE 253
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L F MR GI D T + A L K +H++ I D +V V +
Sbjct: 254 SQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSAL 313
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+KC +K AE FR + + ++SW ++I G ++++ + M DG P
Sbjct: 314 VDMYSKCRSIKPAETAFRRMS--CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T+ S++SSC +L +G H + G ++V N L+++Y KCG I+ A LF
Sbjct: 372 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +VSWTA+++GYAQ G E + LF M A PD VT + ++S C ++G +E
Sbjct: 432 DEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVE 491
Query: 377 LG-KWFDNYACSGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMI 432
G +F + G+ D+ C +ID+YS+ G + +A E +P + W T++
Sbjct: 492 KGCSYFHSMQKDHGIVPIDDHYTC--MIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549
Query: 433 AGCALNGEFVEALDLFHQMMELD 455
+ C L G+ ++E+D
Sbjct: 550 SACRLRGDMEIGQWAAENLLEID 572
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 159/377 (42%), Gaps = 45/377 (11%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL ++ W + + +AL FRRM+ I + TF I AC LS
Sbjct: 227 RLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALS 286
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IH +I+++ + ++FV + +VDMY+KC + A F +M +++ SW A+IV
Sbjct: 287 ALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIV 346
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+ Q G E+ + +F M+ GI D T+ + + + L H + G+
Sbjct: 347 GYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMH 406
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
++V N ++ Y KC ++ A +F E VSW +++ G + ++++ +
Sbjct: 407 YITVSNALVTLYGKCGSIEDAHRLFD--EMLFHDQVSWTALVTGYAQFGRAKETIDLFEK 464
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ +PD T + +LS+C S+ G
Sbjct: 465 MLAKDVKPDGVTFIGVLSAC-----------------------------------SRAGF 489
Query: 309 IDSARFLFDGMCDRTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
++ F M + +T MI Y++ G L EA M PD +
Sbjct: 490 VEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMH---PDAIGWG 546
Query: 364 SMISGCGQSGALELGKW 380
+++S C G +E+G+W
Sbjct: 547 TLLSACRLRGDMEIGQW 563
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/495 (36%), Positives = 271/495 (54%), Gaps = 4/495 (0%)
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKS-VHSF 180
WN + A+ + L L+ M G + + F L A A L +L S H
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCA--ALSLPILGSQFHGQ 74
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+G + V IS Y K + + A VF + V +N+++ G K
Sbjct: 75 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+++ +R M +G + T++ L+ +CV P L G +H + YGFD DVSV+N I
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
+MY KCG ++ A+ LFD M + +SW AM+SGYAQ G L L+ M+ G PD V
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++ ++S C GA +G + + G N + NALI+MY++CG++ A+ +F +
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
PE+T+VSWT +I G ++G A+ LF +M+ + P+ F+ VL AC+HAG ++G
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 374
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
YF +M + YQ+ P HYSCM DLLGR G+LKEA ++SMPIK D +WG LL ACKI
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+N+E+ E R+ ELEP + YV ++NIY+ GV +R MMK ++KK PG S
Sbjct: 435 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 494
Query: 601 LVHINGKTCTFTVED 615
V + G+ F V D
Sbjct: 495 YVELKGRVHPFIVGD 509
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 233/450 (51%), Gaps = 8/450 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+Q+RE + + +AL L+ +M ++ PN TFPF K+CA LS + HG I
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--MPDRDVASWNAMIVGFAQMGFLEKV 139
K + FVQT ++ MY K +D A K+F++ + +NA++ G+ +
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF M G+ + VT++GL A + +L L S+H + G D+DVSV N +I+
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC + A+ +F E ++ ++SWN+++ G + L YR+M +G PD
Sbjct: 197 YMKCGSVNYAQKLFD--EMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+V +LSSC A G V GF + + N LI+MY++CG++ A+ +FDGM
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
+RT VSWTA+I GY G + A++LF M +G PD + ++S C +G + G
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 374
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCAL 437
++F + L+ + ++D+ + G + +A+ L ++P K W ++ C +
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ A F +++EL+ P + + +L
Sbjct: 435 HKNVELAELAFERVIELE--PENIGYYVLL 462
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 321/597 (53%), Gaps = 4/597 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WNS I V +AL LFRRM+ + N+ T + + CA+L+ + + +H
Sbjct: 230 VASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHA 289
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K +I +V MYA+C +D A ++F ++ D+D SWN+M+ + Q +
Sbjct: 290 ALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAE 348
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ F M G D ++ L A H L + VH++ + +D+D+ + NT +
Sbjct: 349 AIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMD 408
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC ++ + VF + ++ VSW +II ++ +++ +R +G + D
Sbjct: 409 MYIKCYSVECSARVFDRMR--IKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDP 466
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+ S+L +C +++ + VHS+ I G LD+ + N +I +Y +CG++ A +F+
Sbjct: 467 MMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEM 525
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + V+WT+M++ +A+ G L EA+ LF M AG PD V ++ ++ +L G
Sbjct: 526 LDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKG 585
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K + G V ++L+DMYS CGS+ A ++F K VV WT MI ++
Sbjct: 586 KEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMH 645
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +A+ +F +M+E + P+ V+FLA+L AC+H+ +++G Y ++M Y++ P H
Sbjct: 646 GHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEH 705
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ DLLGR G+ +EA F++SMP++ + +W LL AC+IH+N E+ +L ELE
Sbjct: 706 YACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELE 765
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + YV ++N++A G+W+ V +RT M ++K P S + I TFT D
Sbjct: 766 PDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARD 822
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 269/546 (49%), Gaps = 11/546 (2%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKND----IEPNNLTFPFIAKACAKLSDFL 71
+ T+ WN+ I + A +A+ ++R M+ ++ P+ T + KAC D
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGF 130
+HG VKS V +V MYAKC LD A ++F+ M D RDVASWN+ I G
Sbjct: 181 CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
Q G + L LF M+ G + T +G+ Q L+ + +H+ + G + ++
Sbjct: 241 VQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI 300
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
CN + YA+C + A VFR I G + +SWNS++ + ++++F+ M+
Sbjct: 301 Q-CNALLVMYARCGWVDSALRVFREI--GDKDYISWNSMLSCYVQNRLYAEAIDFFGEMV 357
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+GF PD +VSLLS+ L+ GR VH++ + D D+ + NTL+ MY KC ++
Sbjct: 358 QNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVE 417
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ +FD M + VSWT +I+ YAQ EA+ F + G D + + S++ C
Sbjct: 418 CSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
++ L K +YA GL D +++ N +ID+Y +CG + A +F L +K +V+WT+
Sbjct: 478 GLKSISLLKQVHSYAIRNGLLD-LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTS 536
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
M+ A NG EA+ LF +M+ ++P+ V + +L A L KG + +
Sbjct: 537 MVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR-G 595
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ E S + D+ G + AL K D +W ++ A +H + + Y+
Sbjct: 596 KFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYI 654
Query: 551 AYRLFE 556
R+ E
Sbjct: 655 FKRMLE 660
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 200/405 (49%), Gaps = 9/405 (2%)
Query: 74 QMIHGHIVKSPFWSDI---FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ +H H V + D F+ T ++ MY KC RL A++LFD MP R V SWNA+I
Sbjct: 75 RQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGAC 134
Query: 131 AQMGFLEKVLCLFYNMR----LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
G + + ++ MR + G D T+ + +A VH + G+
Sbjct: 135 LSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGL 194
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D V N + YAKC L A VF + +G R V SWNS I GC F ++L+ +
Sbjct: 195 DRSTLVANALVGMYAKCGLLDSALRVFEWMRDG-RDVASWNSAISGCVQNGMFLEALDLF 253
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
R M DGF + T V +L C L GR +H+ + G + ++ N L+ MY++C
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARC 312
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G +DSA +F + D+ +SW +M+S Y Q EA+ F M G PD ++S++
Sbjct: 313 GWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLL 372
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S G G L G+ YA L ++ + N L+DMY KC S+ + +F + K V
Sbjct: 373 SAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHV 432
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
SWTT+IA A + + EA+ F + ++ + + ++L+AC+
Sbjct: 433 SWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
Query: 272 EALVQGRLVHSHGIHYGF--DLDVSVINT-LISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
A+ +GR +H+H + G D D + T L+ MY KCG + A LFDGM RT SW
Sbjct: 69 RAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWN 128
Query: 329 AMISGYAQKGDLDEALRLFFAMEA----AGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
A+I G EA+ ++ AM A AG PD T+ S++ CG G G
Sbjct: 129 ALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGL 188
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVE 443
A GL + +V NAL+ MY+KCG + A +F + + + V SW + I+GC NG F+E
Sbjct: 189 AVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLE 248
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
ALDLF +M N T + VLQ C L G
Sbjct: 249 ALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHG 284
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 89/224 (39%), Gaps = 35/224 (15%)
Query: 336 QKGDLDEALRLFFAMEAAGEVP----------DLVTVLSMISGCGQSGALELGKWFDNYA 385
+ GDL EALR A A G P DLV V +S G+ +A
Sbjct: 31 KDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSE---------GRQLHAHA 81
Query: 386 CSGGL---KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+ G D + L+ MY KCG + DA LF +P +TV SW +I C +G
Sbjct: 82 VATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAG 141
Query: 443 EALDLFHQMMELD----LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
EA+ ++ M + P+ T +VL+AC G G L K L+
Sbjct: 142 EAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVK-----SGLDR 196
Query: 499 YSCMADLL----GRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ +A+ L + G L AL + M D W + + C
Sbjct: 197 STLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 294/537 (54%), Gaps = 11/537 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
I I+ + F + ++ +V + A R+ A +LFD++PD ++A WN+M G+AQ
Sbjct: 57 IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSES 116
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+V+ LF+ M+ + I+ + T + ++ L + VH F I G + V T
Sbjct: 117 YREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTT 176
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I Y+ + A +F + E R VV+W S+I G L R +
Sbjct: 177 LIDMYSAGGTVGDAYKIFCEMFE--RNVVAWTSMINGYI----LSADLVSARRLFDLAPE 230
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
DV ++S + +V+ R + H + DV NT++ Y+ G++++ L
Sbjct: 231 RDVVLWNIMVSGYIEGGDMVEARKL----FHEMPNRDVMFWNTVLKGYATNGNVEALEGL 286
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGA 374
F+ M +R SW A+I GYA G E L F M + +VP + T+++++S C + GA
Sbjct: 287 FEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGA 346
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LGKW YA S GLK NV V NAL+DMY+KCG I +A +F + K ++SW T+I G
Sbjct: 347 LDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGG 406
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A++ +AL+LF QM +P+ +TF+ +L ACTH G +E G+ YF M Y + P
Sbjct: 407 LAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMP 466
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
++ HY CM D+L R G+L++A+ FV+ MP+++D IW LL AC+I++N+E+ E RL
Sbjct: 467 QIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRL 526
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
ELEP + A YV ++NIY GRW+ VA L+ M+ KK PG SL+ +N F
Sbjct: 527 IELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEF 583
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 214/443 (48%), Gaps = 13/443 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS R + + LF +MK DI PN TFP + K+C K++ + + +H
Sbjct: 100 NIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVH 159
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++K F + FV TT++DMY+ + AYK+F +M +R+V +W +MI G+ L
Sbjct: 160 CFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLV 219
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
LF + + D V + I + + + H + DV NT +
Sbjct: 220 SARRLFD----LAPERDVVLWNIMVSGYIEGGDMVEARKL----FHEMPNRDVMFWNTVL 271
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRP 256
YA +++ E +F + E R + SWN++IGG + F + L ++ M+ + P
Sbjct: 272 KGYATNGNVEALEGLFEEMPE--RNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPP 329
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T+V++LS+C AL G+ VH + G +V V N L+ MY+KCG I++A +F
Sbjct: 330 NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVF 389
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
GM + +SW +I G A +AL LFF M+ AG+ PD +T + ++ C G +E
Sbjct: 390 RGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVE 449
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAG 434
G +F + A + + ++DM ++ G + A +P E V W ++
Sbjct: 450 DGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGA 509
Query: 435 CALNGEFVEALDLFHQMMELDLR 457
C + A +++EL+ +
Sbjct: 510 CRIYKNVELAELALQRLIELEPK 532
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 312/586 (53%), Gaps = 4/586 (0%)
Query: 32 KNEAHKAL-LLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
+N+ H + LFR M DIE N+ T F KAC L D I V+ F ++
Sbjct: 122 RNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLY 181
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
V ++MV+ K L A K+FD MP++DV WN++I G+ Q G + + +F M G
Sbjct: 182 VGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGG 241
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
++ VT+ L +A + + HS+ + +G+ DV V + + Y+ D A
Sbjct: 242 LRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAA 301
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
LVF + R+++SWN++I G +S +R ++ G D T+VSL+ C
Sbjct: 302 LVFDSMCS--RSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQ 359
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
L GR++HS I + + + ++ MYSKCG I A +F M + ++WTAM
Sbjct: 360 TSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAM 419
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
+ G +Q G ++AL+LF M+ + VT++S++ C G+L G+ + G
Sbjct: 420 LVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGY 479
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFY-ALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ ++ +ALIDMY+KCG I A +LF K V+ +MI G ++G AL ++
Sbjct: 480 AFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYS 539
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M+E L+PN+ TF+++L AC+H+G +E+G F+ M + + V P+ HY+C+ DL R
Sbjct: 540 RMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRA 599
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G+L+EA + V+ MP + + LL C+ H+N +G +A RL L+ ++ YV ++
Sbjct: 600 GRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLS 659
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIYA +W+ V +R +M+ +KK PG SL+ + K TF D
Sbjct: 660 NIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASD 705
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 216/430 (50%), Gaps = 10/430 (2%)
Query: 58 PFIAKACAKLSDFLYS--------QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
PF +A + S L+ + IH I+K+ ++ F+ ++ +Y+ L A
Sbjct: 40 PFFNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHAR 99
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
+FD+ + A NAMI GF + +V LF M I+ + T M +A
Sbjct: 100 NVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLL 159
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ + + G + V ++ ++ K L A+ VF G+ E + VV WNSI
Sbjct: 160 DDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPE--KDVVCWNSI 217
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
IGG F +S+ + MI G RP T+ +LL +C G HS+ + G
Sbjct: 218 IGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGM 277
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
DV V+ +L+ MYS GD SA +FD MC R+ +SW AMISGY Q G + E+ LF
Sbjct: 278 GNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRR 337
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
+ +G D T++S+I GC Q+ LE G+ + L+ ++++ A++DMYSKCG+
Sbjct: 338 LVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGA 397
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
I A +F + +K V++WT M+ G + NG +AL LF QM E + N VT ++++
Sbjct: 398 IKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHC 457
Query: 470 CTHAGFLEKG 479
C H G L KG
Sbjct: 458 CAHLGSLTKG 467
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 209/437 (47%), Gaps = 5/437 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I V K +++ +F M + P+ +T + KAC + H +++
Sbjct: 214 WNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVL 273
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+D+FV T++VDMY+ A +FD M R + SWNAMI G+ Q G + +
Sbjct: 274 ALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYA 333
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF + G D T++ L + L + +HS I +++ + + + Y+
Sbjct: 334 LFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYS 393
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +K A +VF + G + V++W +++ G + +D+L + M + + T+
Sbjct: 394 KCGAIKQATIVFGRM--GKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTL 451
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VSL+ C +L +GR VH+H I +G+ D + + LI MY+KCG I SA LF+
Sbjct: 452 VSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFH 511
Query: 322 -RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK- 379
+ + +MI GY G AL ++ M P+ T +S+++ C SG +E GK
Sbjct: 512 LKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKA 571
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
F + ++ L+D++S+ G + +A EL +P + + +++GC +
Sbjct: 572 LFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTH 631
Query: 439 GEFVEALDLFHQMMELD 455
+ + +++ LD
Sbjct: 632 KNTNMGIQIADRLISLD 648
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S ++ WN+ I V ++ LFRR+ ++ ++ T + + C++ SD ++
Sbjct: 309 SRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRI 368
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H I++ S + + T +VDMY+KC + A +F +M ++V +W AM+VG +Q G+
Sbjct: 369 LHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGY 428
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E L LF M+ + A+ VT++ L H L+ ++VH+ I G D + +
Sbjct: 429 AEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSA 488
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I YAKC + AE +F E L+ V+ NS+I G +L Y MI + +
Sbjct: 489 LIDMYAKCGKIHSAEKLFNN-EFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLK 547
Query: 256 PDVTTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P+ TT VSLL++C + +G+ L HS + L+ ++S+ G ++ A
Sbjct: 548 PNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADE 607
Query: 315 LFDGM 319
L M
Sbjct: 608 LVKQM 612
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 290/518 (55%), Gaps = 18/518 (3%)
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
YK DK +V SWN++I A+ G + L F ++R +G+ + ++
Sbjct: 1099 YKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSAL 1155
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L + H G + D+ V + I Y+KC LK A +F I LR VVSW S
Sbjct: 1156 CDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP--LRNVVSWTS 1213
Query: 229 IIGGCTYGDKFDDSLNFYRHM------IYDG--FRPDVTTVVSLLSSC--VCPEALVQGR 278
+I G ++ D++L ++ + DG D +VS+LS+C V + + +G
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG- 1272
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH + GFD + V NTL+ Y+KCG ++ +FD M ++ +SW +MI+ YAQ G
Sbjct: 1273 -VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331
Query: 339 DLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
EAL +F M G + VT+ +++ C +GAL GK + L+ NV V
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
++IDMY KCG + A++ F + EK V SWT M+AG ++G EALD+F++M+ ++
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN +TF++VL AC+HAG +E+GW +FN M Y + P + HY CM DL GR G L EA +
Sbjct: 1452 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 1511
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
++ M +K D +WG+LL AC+IH+N+++GE A +LFEL+P + YV ++N+YA GR
Sbjct: 1512 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 1571
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W V +R +MK Q+ K PG SLV + G+ F V D
Sbjct: 1572 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGD 1609
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 229/464 (49%), Gaps = 13/464 (2%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
+S+L K S ++ WNS I + ++ +AL F ++K + P +FP K
Sbjct: 1091 SSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIK 1150
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
+C+ L D + +M H F +D+FV + ++DMY+KC +L A LFD++P R+V S
Sbjct: 1151 SCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVS 1210
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLV--------GIQADFVTVMGLTQAAIHAKHLSLL 174
W +MI G+ Q + L LF + + D V ++ + A +
Sbjct: 1211 WTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGIT 1270
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+ VH F + G D + V NT + AYAKC +++ VF +EE + +SWNS+I
Sbjct: 1271 EGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE--KDDISWNSMIAVYA 1328
Query: 235 YGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
++L + M+ + G R + T+ ++L +C AL G+ +H I + +V
Sbjct: 1329 QSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNV 1388
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V ++I MY KCG ++ A+ FD M ++ SWTAM++GY G EAL +F+ M A
Sbjct: 1389 CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 1448
Query: 354 GEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G P+ +T +S+++ C +G +E G WF+ ++ + ++D++ + G + +
Sbjct: 1449 GVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNE 1508
Query: 413 ARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
A L + K V W +++ C ++ ++ ELD
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELD 1552
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 190/379 (50%), Gaps = 33/379 (8%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
K+ L+ +H+ I G+ D + I Y+ + A L+F I+ +WN
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP--CTFTWNL 95
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
II T + +L Y++M+ G D T ++ +C ++ G++VH I YG
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 289 FDLDVSVINTLISMYSKCG-------------------------------DIDSARFLFD 317
F DV V N LI Y KCG D+ AR +FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + VSWTAMI+GY + +EAL LF M+A P+ T++S+I C + G L L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ +YA ++ V + ALIDMYSKCGSI DA E+F +P K++ +W +MI +
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL+LF +M ++++P+ +TF+ VL AC H +++G YF MT+ Y + P
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 498 HYSCMADLLGRKGKLKEAL 516
HY CM +L R L EA
Sbjct: 396 HYECMTELYARSNNLDEAF 414
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 151/340 (44%), Gaps = 32/340 (9%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
F+ + C +F + + IH I++S +D + ++ +Y+ R+ A LF ++ +
Sbjct: 32 FLLQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+WN +I G E+ L L+ NM GI AD T + +A + + L K VH
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG---------------------IE 217
I G DV V N I Y KC + A VF ++
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 218 EGLR--------TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
E R VVSW ++I G + +++L ++ M + P+ T+VSL+ +C
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
L GR +H + I ++ V + LI MYSKCG I A +F+ M ++ +W +
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
MI+ G EAL LF ME PD +T + ++ C
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCAC 368
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 42/327 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + +AL+L++ M I + TFPF+ KAC +++HG ++
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM-------------------------- 115
K F D+FVQ ++D Y KC A K+F+KM
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 116 -----PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
P ++V SW AMI G+ + E+ L LF M+ I + T++ L +A
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L+L + +H + I ++ V + I Y+KC +K A VF + +++ +WNS+I
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR--KSLPTWNSMI 330
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGI 285
++LN + M +PD T + +L +CV + + +G R+
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ---- 386
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSA 312
HYG + +Y++ ++D A
Sbjct: 387 HYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 131/296 (44%), Gaps = 35/296 (11%)
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R +H+ I G D + LI +YS G I A LF + + +W +I
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G ++AL L+ M G D T +I C +++LGK G +V V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 398 NALIDMYSKCG----------------------------SIGD---ARELFYALPEKTVV 426
N LID Y KCG S GD AR +F +P K VV
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SWT MI G N + EAL+LF +M ++ PN T +++++ACT G L G G +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 487 TK-VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
K ++ L + + D+ + G +K+A++ ++MP KS W +++ + +H
Sbjct: 284 IKNCIEIGVYLG--TALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVH 336
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W + I + + +AL LF+RM+ +I PN T + KAC ++ +
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH + +K+ +++ T ++DMY+KC + A ++F+ MP + + +WN+MI G
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
++ L LF M V ++ D +T +G+ A +H K++
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL ++ ++ LI +YS G I A LFY + +W +I +NG +AL L+
Sbjct: 54 GLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLY 113
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
M+ + ++ TF V++ACT+ ++ G + K Y + ++ + + D +
Sbjct: 114 KNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFVQNNLIDFYFK 172
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV-AYRLF-ELEPHSAAPYV 566
G + AL + M +++ W T++ I G+ A R+F E+ + +
Sbjct: 173 CGHTRFALKVFEKMRVRNVVS-WTTVISGL-----ISCGDLQEARRIFDEIPSKNVVSWT 226
Query: 567 EMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
M N Y + + L M+ + FP + + K CT
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQAENI--FPNEYTMVSLIKACT 268
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 326/603 (54%), Gaps = 17/603 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS-DFLYSQMIHGHI 80
WNS I+ VD ALL + RM++ + ++ TFP I +A L Y + +H
Sbjct: 117 WNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVA 176
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K F D++ TM+++Y KC + A KLFD+M RD+ SW ++I G+ +
Sbjct: 177 MKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGF 236
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF MR+ ++ + VT++ + QA + ++ + +HS+ I G D SV N+ + Y
Sbjct: 237 KLFNKMRM-EMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMY 295
Query: 201 AKCNDL-KMAELVFRGIEEGLRTVVSWNSIIGGCTY-GD--KFDDSLNFYRHMIYDGFRP 256
K + E F IEE R ++SWN +I ++ GD + + N R +
Sbjct: 296 TKTGGSGEEVETFFSEIEE--RDIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIE- 352
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+T VVS +++C L +G ++H I G D ++ L+++Y+KCG ++ + LF
Sbjct: 353 SLTLVVSAIANCA---NLSEGGMLHCSAIKTGLH-DTVLMTCLLALYAKCGALEISAQLF 408
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ R ++W++M+SG+ Q G EA+ L+ M A+G P+ + +++ GAL+
Sbjct: 409 RDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQ 468
Query: 377 LGK----WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
LGK +F S +D+ + +L++MY +CGSI A F + K VV+WT+MI
Sbjct: 469 LGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMI 528
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
G +G EAL F M+E +++PN VTFL++L AC+H+G + +G F+ M +++
Sbjct: 529 EGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRI 588
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P+LNHY+CM DLLGR GKLKEAL + + D+ IWG LL A ++H + ++GEY A
Sbjct: 589 EPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAE 648
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+L ELEP + Y +NI A RW V +R +M +KK PG S + + G F
Sbjct: 649 KLLELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFV 708
Query: 613 VED 615
D
Sbjct: 709 SGD 711
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 263 SLLSSCVCPEAL--VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
SLL SC +AL + L+ S G +SV + LI++YS+ D SA + +
Sbjct: 56 SLLHSCNNLQALKRIHASLIVSSGFQ-----PLSVASKLITLYSQLNDFRSAFSICNSFE 110
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA-LELGK 379
+ V W ++I + G AL + M G D T + G +E G+
Sbjct: 111 EPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGE 170
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
A G +V N ++++Y KCGSIG+A +LF + + +VSWT++I+G
Sbjct: 171 TVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGE 230
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
F LF++ M +++ PN VT + +LQAC+
Sbjct: 231 SFSRGFKLFNK-MRMEMEPNSVTMVVMLQACS 261
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/454 (38%), Positives = 260/454 (57%), Gaps = 1/454 (0%)
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
AA L + H+ + + + +D V N I+ Y+ CN A LV
Sbjct: 13 SAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASD 72
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VVSWN+II G G + +L + M + R D T++++L +C A+ G L H+
Sbjct: 73 VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHA 132
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+ GF+++ + ++L+SMY+KCG ++ AR +F+ M +R V WT+MI+G Q G E
Sbjct: 133 LVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKE 192
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A+ LF M+ AG D T+ +++S CGQ GAL+LG++ Y GL + V N+LID
Sbjct: 193 AVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLID 252
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRV 461
MYSKCG + A ++F+ L ++ V +WT MI G A+NG VEALDLF QM D + PN V
Sbjct: 253 MYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEV 312
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
FL VL AC+H G +E+G+ +F+ M+KVY + P + HY CM DLLGR L EA F++
Sbjct: 313 IFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKD 372
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MP+ D +W +LL AC+ + + EY A R+ +LEP +V ++N+YA RW V
Sbjct: 373 MPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDV 432
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
N+RT M ++ K PG S + ++G F D
Sbjct: 433 NNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGD 466
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 132/254 (51%), Gaps = 3/254 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+S + WN+ I + +KAL F +M K + + +T + ACA+ +
Sbjct: 70 ASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 129
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
H +V + F + ++ +++V MYAKC ++ A ++F++MP+R+V W +MI G Q G
Sbjct: 130 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGR 189
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + LF +M++ G++AD T+ + + L L + +H++ G+ ++SV N+
Sbjct: 190 FKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNS 249
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGF 254
I Y+KC D+ A +F G+ + R V +W +I G ++L+ + M D
Sbjct: 250 LIDMYSKCGDVNKAYQIFHGLTK--RDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKV 307
Query: 255 RPDVTTVVSLLSSC 268
P+ + +L++C
Sbjct: 308 MPNEVIFLGVLTAC 321
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--K 423
IS + +L++G F + L + V NALI+MYS C AR + + P
Sbjct: 12 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWAS 71
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---- 479
VVSW T+IAG G +AL FHQM + +R + VT L VL AC G ++ G
Sbjct: 72 DVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCH 131
Query: 480 ------------------------WGYFNLMTKVYQVNPELNHYSCMADLLG--RKGKLK 513
G +V+ PE N + + G + G+ K
Sbjct: 132 ALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFK 191
Query: 514 EALDFVQSMPI---KSDAGIWGTLLCACKIHRNIEIGEYV 550
EA+D + M I K+D T++ +C +++G Y+
Sbjct: 192 EAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYL 231
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 308/586 (52%), Gaps = 11/586 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI---VKSPFWSDI 89
EAH L + M D+ ++ + +AC KL ++IH + VK+P S
Sbjct: 69 KEAHDFL---KEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS-- 123
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
++ ++ MY C K+FD+M +++ SW +I +A+ G LEK + LF +M+
Sbjct: 124 -IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS 182
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
GI+ + M L Q+ + L L K +HS I ++A+++V + Y +C L+ A
Sbjct: 183 GIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGA 242
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+LVF G++ + V+W ++ G T K + +L + M +G D +L C
Sbjct: 243 KLVFDGMDA--QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCC 300
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
E GR +HSH + G + +VSV L+ Y KCGDI+SA F + + VSW+A
Sbjct: 301 GLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSA 360
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+ISG++Q G L++ +++F ++ + G V + S+ C L +G A G
Sbjct: 361 LISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRG 420
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L + +A++ MYSKCG + AR F ++ E V+WT +I+G A +G EAL F
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M +RPN VTF+AVL AC+H+G + + Y M++ Y V P ++HY CM D R
Sbjct: 481 RMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRA 540
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L+EAL+ + MP + DA W +LL C H ++++G+ A LF L+P A Y+ +
Sbjct: 541 GLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLF 600
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
N+Y+ G+W+ ++R +M ++KK S + + G+ F V D
Sbjct: 601 NLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGD 646
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 210/416 (50%), Gaps = 4/416 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I E KA+ LF M+ + I PN+ + + ++C S + IH H++
Sbjct: 156 WVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVI 215
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ ++I V+T + +MY +C L+ A +FD M ++ +W ++VG+ Q LE L
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALE 275
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M + G++ D + + + + + +HS + +G +++VSV + Y
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYV 335
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++ A F I E VSW+++I G + + +D + + + +G +
Sbjct: 336 KCGDIESAYRSFGRISEP--NDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+ +C L G H I G + + +++MYSKCG +D AR F+ + +
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-ELGKW 380
V+WTA+ISGYA G+ EAL F M++ G P+ VT +++++ C SG + E ++
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
+ + G+K + + +ID YS+ G + +A EL +P E +SW +++ GC
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGC 569
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 318/588 (54%), Gaps = 11/588 (1%)
Query: 37 KALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFW-SDIFVQTT 94
KA+ +F ++ D + PN F + +AC K F + G ++K+ ++ S + V
Sbjct: 138 KAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCE 197
Query: 95 MVDMYAK-CD--RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-G 150
++DM+ K C L+ A K+FDKM +++V +W MI AQ G+ ++ + LF M + G
Sbjct: 198 LIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSG 257
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
D T+ GL + LSL K +HS+ I G+ D+ V + + YAKC ++ A
Sbjct: 258 YVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEAR 317
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDK--FDDSLNFYRHMIYDG-FRPDVTTVVSLLSS 267
VF G+ E V+SW +++ G G +++ + +M+ G P+ T +L +
Sbjct: 318 KVFDGMRE--HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKA 375
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C G VH I G V N L+S+Y+K G ++SAR FD + ++ VS
Sbjct: 376 CASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSE 435
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
T + + +L+ L +E G T S++SG G + G+
Sbjct: 436 TVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVK 495
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G + ++ V NALI MYSKCG+ A ++F + + V++WT++I G A +G +AL+L
Sbjct: 496 IGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALEL 555
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F+ M+E ++PN VT++AVL AC+H G +++ W +F M + + P + HY+CM DLLG
Sbjct: 556 FYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLG 615
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
R G L EA++F+ SMP +DA +W T L +C++HRN ++GE+ A + E EPH A Y+
Sbjct: 616 RSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYIL 675
Query: 568 MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++N+YA GRW+ VA +R MK+ Q+ K G S + + + F V D
Sbjct: 676 LSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGD 723
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 166/330 (50%), Gaps = 19/330 (5%)
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+T L + I K+ L K +H + D + N+ I+ Y+K ND A +F+
Sbjct: 52 LITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQ 111
Query: 215 GIEEGLRTVVSWNSIIG------GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
+E R VVS++SII C + D L ++ DG P+ +++ +C
Sbjct: 112 SMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQL-----LLQDGVYPNEYCFTAVIRAC 166
Query: 269 VCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSK---CGDIDSARFLFDGMCDRTR 324
+ G + + G FD V V LI M+ K D++SAR +FD M ++
Sbjct: 167 LKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNV 226
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
V+WT MI+ AQ G DEA+ LF M ++G VPD T+ +IS C + L LGK +
Sbjct: 227 VTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHS 286
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV- 442
+ GL ++ V +L+DMY+KCG + +AR++F + E V+SWT ++ G G
Sbjct: 287 WVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYE 346
Query: 443 -EALDLFHQM-MELDLRPNRVTFLAVLQAC 470
EA+ +F M ++ + PN TF VL+AC
Sbjct: 347 REAMRMFSNMLLQGGVAPNCFTFSGVLKAC 376
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 214/475 (45%), Gaps = 22/475 (4%)
Query: 31 DKNEAHKALLLFRRMKKNDIEPNNL-TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI 89
+ + HKA+ N L T + K C + + +++H + S D
Sbjct: 28 NPQQLHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDT 87
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
+ +++ +Y+K + A+ +F M + RDV S++++I FA K + +F +
Sbjct: 88 LLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLL 147
Query: 148 LV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAYAK-CN 204
L G+ + + +A + + F + G D+ V V I + K C+
Sbjct: 148 LQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCS 207
Query: 205 --DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYDGFRPDVTTV 261
DL+ A VF + E + VV+W +I D++++ + M + G+ PD T+
Sbjct: 208 LADLESARKVFDKMRE--KNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
L+S C + L G+ +HS I G LD+ V +L+ MY+KCG + AR +FDGM +
Sbjct: 266 TGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE 325
Query: 322 RTRVSWTAMISGYAQKGD--LDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
+SWTA+++GY + G EA+R+F M G V P+ T ++ C + G
Sbjct: 326 HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG 385
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT----TMIAG 434
+ GL V N L+ +Y+K G + AR+ F L EK +VS T T +
Sbjct: 386 EQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKD 445
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
LN E DL ++ + + T+ ++L G + KG ++ K+
Sbjct: 446 FNLNSE----QDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKI 496
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 299/544 (54%), Gaps = 31/544 (5%)
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D L A +F+ + + ++ WN M G A L L+ M +G+ + + L
Sbjct: 13 DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--------- 213
++ +K L + +H + +G D D+ V + IS YA+ L+ A VF
Sbjct: 73 KSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVV 132
Query: 214 -----------RGI---------EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
RG E ++ VVSWN++I G F ++L Y+ M+
Sbjct: 133 SYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN 192
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD +T+V+++S+C ++ GR +HS +GF ++ ++N LI +YSKCG++++A
Sbjct: 193 VKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETAC 252
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LF G+ + +SW +I G+ EAL LF M +GE P+ VT+LS++ C G
Sbjct: 253 GLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLG 312
Query: 374 ALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
A+++G+W Y G+ + + +LIDMY+KCG I A+++F ++ +++ SW M
Sbjct: 313 AIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAM 372
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G A++G+ A DLF +M + + P+ +TF+ +L AC+H+G L+ G F M++ Y+
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYK 432
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ P+L HY CM DLLG G KEA + +++MP++ D IW +LL ACK+H N+E+GE A
Sbjct: 433 ITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYA 492
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
L ++EP + YV ++NIYA GRWD VA +RT++ +KK PG S + I+ F
Sbjct: 493 QNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEF 552
Query: 612 TVED 615
+ D
Sbjct: 553 IIGD 556
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 237/452 (52%), Gaps = 37/452 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R +++ AL L+ M + PN+ +FPF+ K+CAK + Q IHGH++
Sbjct: 33 WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVL 92
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR----------------------- 118
K + D++V T+++ MYA+ RL+ A+K+FD+ R
Sbjct: 93 KLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARK 152
Query: 119 --------DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
DV SWNAMI G+ + ++ L L+ +M ++ D T++ + A +
Sbjct: 153 LFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGS 212
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + +HS+ G +++ + N I Y+KC +++ A +F+G+ + + V+SWN++I
Sbjct: 213 IELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK--KDVISWNTLI 270
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 271 GGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKG 330
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S++ +LI MY+KCGDI++A+ +FD M R+ SW AMI G+A G + A LF
Sbjct: 331 VTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFS 390
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD +T + ++S C SG L+LG+ F + + + + +ID+ C
Sbjct: 391 KMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHC 450
Query: 408 GSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
G +A+E+ +P E V W +++ C ++
Sbjct: 451 GLFKEAKEMIRTMPMEPDGVIWCSLLKACKMH 482
>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 307/596 (51%), Gaps = 12/596 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + + WN+ I +H A LF M++ + +P T + +C
Sbjct: 119 RLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQ 178
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
F+ + IHG VK+ D V+ +V MY KC LD LF ++ ++ V SWN MI
Sbjct: 179 LFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIG 238
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
F Q G + + +F M + A+ VT++ + A + +H + IG+
Sbjct: 239 AFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTG------CIHCYATKIGLVE 292
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD--DSLNFY 246
+VSV + + +Y KC +++AEL++ + + + +V+ +II Y +K D + Y
Sbjct: 293 NVSVVTSLVCSYVKCGYIELAELIY--MSKLKKNLVALTAIIS--HYAEKGDMGSVVRLY 348
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
+ + + D +V ++ P+ + G H +G+ G +D V N ISMYSK
Sbjct: 349 SIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKF 408
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
+ID+ LF M +T SW ++IS AQ G +A+ LF M +G PD +T+ S++
Sbjct: 409 DNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLL 468
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S C Q+G L G+ Y L V AL+DMY KCG + A +F ++ E +
Sbjct: 469 SACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLA 528
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW ++I+G L G AL + +MME ++PN++TF +L ACTH G +E+G YF +M
Sbjct: 529 SWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIM 588
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
K + + PE H + M +LGR G +EA+ F+Q+M D+ +WG LL AC IH+ +++
Sbjct: 589 KKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKL 648
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
GE VA +LF + +V M+N+YA RW+ VA +R MM+ G SLV
Sbjct: 649 GESVAKKLFFSNCRNGGFFVLMSNLYAASRRWNDVARIRKMMREMGEDGCSGVSLV 704
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/567 (27%), Positives = 268/567 (47%), Gaps = 43/567 (7%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA-------------- 63
++ ++S + V+ LLLFR + ++ ++PN+ TF + KA
Sbjct: 14 SLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSF 73
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C++ ++ + + H +K F ++V T +D+Y+K + A +LFD P++DV SW
Sbjct: 74 CSE-NEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NA+I G+ + G LF MR T++ L + + KS+H G+
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVK 192
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G+D D V N +S Y KC DL +L+F I E ++VVSWN++IG F +++
Sbjct: 193 AGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITE--KSVVSWNTMIGAFGQNGLFSEAM 250
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
++ M+ + + T+VS+LS A +H + G +VSV+ +L+ Y
Sbjct: 251 LVFKQMLEESVNANSVTMVSILS------ANANTGCIHCYATKIGLVENVSVVTSLVCSY 304
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
KCG I+ A ++ + V+ TA+IS YA+KGD+ +RL+ ++ D V ++
Sbjct: 305 VKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMV 364
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+I G + +G F Y GL + +V N I MYSK +I LF + +K
Sbjct: 365 GIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKK 424
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
T+ SW ++I+ CA G ++A+ LF QM P+ +T ++L AC G L G
Sbjct: 425 TLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGE--- 481
Query: 484 NLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
L + + N +L + + + D+ + G++ A + +SM A W +L+
Sbjct: 482 ILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLAS-WNSLIS----- 535
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEM 568
Y LF H+ Y EM
Sbjct: 536 ---------GYGLFGFHNHALLCYTEM 553
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 312/595 (52%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS ++ +F M++ E N+ T + + + + IHG +V
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S + V T++ MYA R A +F +MP +D+ SWN+++ F G L
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L +M G ++VT A + +H + G+ + + N +S Y
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K ++ + V ++ R VV+WN++IGG + D +L ++ M +G + TV
Sbjct: 392 KIGEMSESRRVL--LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 449
Query: 262 VSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VS+LS+C+ P L++ G+ +H++ + GF+ D V N+LI+MY+KCGD+ S++ LF+G+
Sbjct: 450 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 509
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R ++W AM++ A G +E L+L M + G D + +S + LE G+
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 569
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
A G + + + NA DMYSKCG IG+ ++ +++ SW +I+ +G
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
F E FH+M+E+ ++P VTF+++L AC+H G ++KG Y++++ + + + P + H
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR G+L EA F+ MP+K + +W +LL +CKIH N++ G A L +LEP
Sbjct: 690 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 749
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV +N++A GRW+ V N+R M +KK S V + K +F + D
Sbjct: 750 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 804
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/528 (28%), Positives = 254/528 (48%), Gaps = 11/528 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + DK E + + +++ M+ + N + + +C L D + I G +V
Sbjct: 111 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 170
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS S + V+ +++ M +D A +FD+M +RD SWN++ +AQ G +E+
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR + + TV L H H + +H + +G D+ V VCNT + YA
Sbjct: 231 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 290
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
A LVF+ + + ++SWNS++ + D+L MI G + T
Sbjct: 291 GAGRSVEANLVFKQMPT--KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L++C P+ +GR++H + G + + N L+SMY K G++ +R + M
Sbjct: 349 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 408
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG-ALELGKW 380
R V+W A+I GYA+ D D+AL F M G + +TV+S++S C G LE GK
Sbjct: 409 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 468
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y S G + + V N+LI MY+KCG + +++LF L + +++W M+A A +G
Sbjct: 469 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 528
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHY 499
E L L +M + ++ +F L A LE+G L K+ ++ + + +
Sbjct: 529 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI--F 586
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGI--WGTLLCACKIHRNIE 545
+ AD+ + G++ E V+ +P + + W L+ A H E
Sbjct: 587 NAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 631
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 225/460 (48%), Gaps = 4/460 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL-SDFLYSQMIHGHI 80
WN+ + V + + FR+M I+P++ + AC + S F +HG +
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
KS SD++V T ++ +Y + C+ K+F++MPDR+V SW +++VG++ G E+V+
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ MR G+ + ++ + + K SL + + + G+++ ++V N+ IS
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++ A +F + E R +SWNSI ++S + M + TT
Sbjct: 189 GSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V +LLS + GR +H + GFD V V NTL+ MY+ G A +F M
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SW ++++ + G +AL L +M ++G+ + VT S ++ C E G+
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
GL N ++ NAL+ MY K G + ++R + +P + VV+W +I G A + +
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG-FLEKG 479
+AL F M + N +T ++VL AC G LE+G
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 200/424 (47%), Gaps = 9/424 (2%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
MP R+ SWN M+ G ++G + + F M +GI+ + L A + S+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC--GRSGSMF 58
Query: 175 KS---VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ VH F G+ +DV V + Y + + VF + + R VVSW S++
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMV 116
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + + ++ ++ Y+ M +G + ++ ++SSC + GR + + G +
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
++V N+LISM G++D A ++FD M +R +SW ++ + YAQ G ++E+ R+F M
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ + TV +++S G + G+ G V VCN L+ MY+ G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+A +F +P K ++SW +++A +G ++AL L M+ N VTF + L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
F EKG L+ ++ + + + G+ G++ E+ + MP + D W
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRDVVAW 414
Query: 532 GTLL 535
L+
Sbjct: 415 NALI 418
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 312/595 (52%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS ++ +F M++ E N+ T + + + + IHG +V
Sbjct: 319 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 378
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S + V T++ MYA R A +F +MP +D+ SWN+++ F G L
Sbjct: 379 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 438
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L +M G ++VT A + +H + G+ + + N +S Y
Sbjct: 439 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 498
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K ++ + V ++ R VV+WN++IGG + D +L ++ M +G + TV
Sbjct: 499 KIGEMSESRRVL--LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 556
Query: 262 VSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VS+LS+C+ P L++ G+ +H++ + GF+ D V N+LI+MY+KCGD+ S++ LF+G+
Sbjct: 557 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 616
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R ++W AM++ A G +E L+L M + G D + +S + LE G+
Sbjct: 617 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 676
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
A G + + + NA DMYSKCG IG+ ++ +++ SW +I+ +G
Sbjct: 677 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 736
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
F E FH+M+E+ ++P VTF+++L AC+H G ++KG Y++++ + + + P + H
Sbjct: 737 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 796
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR G+L EA F+ MP+K + +W +LL +CKIH N++ G A L +LEP
Sbjct: 797 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 856
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV +N++A GRW+ V N+R M +KK S V + K +F + D
Sbjct: 857 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 911
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 233/476 (48%), Gaps = 11/476 (2%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ I G +VKS S + V+ +++ M +D A +FD+M +RD SWN++ +AQ
Sbjct: 270 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 329
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G +E+ +F MR + + TV L H H + +H + +G D+ V VC
Sbjct: 330 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 389
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
NT + YA A LVF+ + + ++SWNS++ + D+L MI G
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMPT--KDLISWNSLMASFVNDGRSLDALGLLCSMISSG 447
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+ T S L++C P+ +GR++H + G + + N L+SMY K G++ +R
Sbjct: 448 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 507
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+ M R V+W A+I GYA+ D D+AL F M G + +TV+S++S C G
Sbjct: 508 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 567
Query: 374 -ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
LE GK Y S G + + V N+LI MY+KCG + +++LF L + +++W M+
Sbjct: 568 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 627
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQ 491
A A +G E L L +M + ++ +F L A LE+G L K+ ++
Sbjct: 628 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 687
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI--WGTLLCACKIHRNIE 545
+ + ++ AD+ + G++ E V+ +P + + W L+ A H E
Sbjct: 688 HDSFI--FNAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 738
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 216/460 (46%), Gaps = 29/460 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL-SDFLYSQMIHGHI 80
WN+ + V + + FR+M I+P++ + AC + S F +HG +
Sbjct: 141 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 200
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
KS SD++V T ++ +Y + C+ K+F++MPDR+V SW +++VG++ G E+V+
Sbjct: 201 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 260
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ K SL + + + G+++ ++V N+ IS
Sbjct: 261 DIY-------------------------KDESLGRQIIGQVVKSGLESKLAVENSLISML 295
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++ A +F + E R +SWNSI ++S + M + TT
Sbjct: 296 GSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 353
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V +LLS + GR +H + GFD V V NTL+ MY+ G A +F M
Sbjct: 354 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 413
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SW ++++ + G +AL L +M ++G+ + VT S ++ C E G+
Sbjct: 414 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 473
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
GL N ++ NAL+ MY K G + ++R + +P + VV+W +I G A + +
Sbjct: 474 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 533
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG-FLEKG 479
+AL F M + N +T ++VL AC G LE+G
Sbjct: 534 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 573
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 220/493 (44%), Gaps = 36/493 (7%)
Query: 46 KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRL 105
KKN P F I ++++ + +H VK + T+++MY K R+
Sbjct: 66 KKNHWNPEISCFDQIG--FSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRV 123
Query: 106 DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAA 165
A LFD MP R+ SWN M+ G ++G + + F M +GI+ + L A
Sbjct: 124 KPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC 183
Query: 166 IHAKHLSLLK---SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
+ S+ + VH F G+ +DV V + Y + + VF + + R
Sbjct: 184 --GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RN 239
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VVSW S++ G + + ++ ++ Y+ E+L GR +
Sbjct: 240 VVSWTSLMVGYSDKGEPEEVIDIYK-----------------------DESL--GRQIIG 274
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+ G + ++V N+LISM G++D A ++FD M +R +SW ++ + YAQ G ++E
Sbjct: 275 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 334
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
+ R+F M + + TV +++S G + G+ G V VCN L+
Sbjct: 335 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 394
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY+ G +A +F +P K ++SW +++A +G ++AL L M+ N VT
Sbjct: 395 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 454
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F + L AC F EKG L+ ++ + + + G+ G++ E+ + M
Sbjct: 455 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQM 513
Query: 523 PIKSDAGIWGTLL 535
P + D W L+
Sbjct: 514 P-RRDVVAWNALI 525
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 312/595 (52%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS ++ +F M++ E N+ T + + + + IHG +V
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S + V T++ MYA R A +F +MP +D+ SWN+++ F G L
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L +M G ++VT A + +H + G+ + + N +S Y
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K ++ + V ++ R VV+WN++IGG + D +L ++ M +G + TV
Sbjct: 409 KIGEMSESRRVL--LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 466
Query: 262 VSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VS+LS+C+ P L++ G+ +H++ + GF+ D V N+LI+MY+KCGD+ S++ LF+G+
Sbjct: 467 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 526
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R ++W AM++ A G +E L+L M + G D + +S + LE G+
Sbjct: 527 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 586
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
A G + + + NA DMYSKCG IG+ ++ +++ SW +I+ +G
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
F E FH+M+E+ ++P VTF+++L AC+H G ++KG Y++++ + + + P + H
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR G+L EA F+ MP+K + +W +LL +CKIH N++ G A L +LEP
Sbjct: 707 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 766
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV +N++A GRW+ V N+R M +KK S V + K +F + D
Sbjct: 767 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 821
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/528 (28%), Positives = 254/528 (48%), Gaps = 11/528 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + DK E + + +++ M+ + N + + +C L D + I G +V
Sbjct: 128 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 187
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS S + V+ +++ M +D A +FD+M +RD SWN++ +AQ G +E+
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR + + TV L H H + +H + +G D+ V VCNT + YA
Sbjct: 248 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 307
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
A LVF+ + + ++SWNS++ + D+L MI G + T
Sbjct: 308 GAGRSVEANLVFKQMPT--KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L++C P+ +GR++H + G + + N L+SMY K G++ +R + M
Sbjct: 366 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 425
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG-ALELGKW 380
R V+W A+I GYA+ D D+AL F M G + +TV+S++S C G LE GK
Sbjct: 426 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 485
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y S G + + V N+LI MY+KCG + +++LF L + +++W M+A A +G
Sbjct: 486 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 545
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHY 499
E L L +M + ++ +F L A LE+G L K+ ++ + + +
Sbjct: 546 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI--F 603
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGI--WGTLLCACKIHRNIE 545
+ AD+ + G++ E V+ +P + + W L+ A H E
Sbjct: 604 NAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 648
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 225/460 (48%), Gaps = 4/460 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL-SDFLYSQMIHGHI 80
WN+ + V + + FR+M I+P++ + AC + S F +HG +
Sbjct: 26 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
KS SD++V T ++ +Y + C+ K+F++MPDR+V SW +++VG++ G E+V+
Sbjct: 86 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 145
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ MR G+ + ++ + + K SL + + + G+++ ++V N+ IS
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 205
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++ A +F + E R +SWNSI ++S + M + TT
Sbjct: 206 GSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V +LLS + GR +H + GFD V V NTL+ MY+ G A +F M
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SW ++++ + G +AL L +M ++G+ + VT S ++ C E G+
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
GL N ++ NAL+ MY K G + ++R + +P + VV+W +I G A + +
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG-FLEKG 479
+AL F M + N +T ++VL AC G LE+G
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 209/441 (47%), Gaps = 9/441 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY K R+ A LFD MP R+ SWN M+ G ++G + + F M +GI+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 158 VMGLTQAAIHAKHLSLLKS---VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+ L A + S+ + VH F G+ +DV V + Y + + VF
Sbjct: 61 IASLVTAC--GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ + R VVSW S++ G + + ++ ++ Y+ M +G + ++ ++SSC +
Sbjct: 119 EMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
GR + + G + ++V N+LISM G++D A ++FD M +R +SW ++ + Y
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
AQ G ++E+ R+F M + + TV +++S G + G+ G V
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
VCN L+ MY+ G +A +F +P K ++SW +++A +G ++AL L M+
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
N VTF + L AC F EKG L+ ++ + + + G+ G++ E
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSE 415
Query: 515 ALDFVQSMPIKSDAGIWGTLL 535
+ + MP + D W L+
Sbjct: 416 SRRVLLQMP-RRDVVAWNALI 435
>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 307/596 (51%), Gaps = 12/596 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + + WN+ I +H A LF M++ + +P T + +C
Sbjct: 119 RLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQ 178
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
F+ + IHG VK+ D V+ +V MY KC LD LF ++ ++ V SWN MI
Sbjct: 179 LFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIG 238
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
F Q G + + +F M + A+ VT++ + A + +H + IG+
Sbjct: 239 AFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTG------CIHCYATKIGLVE 292
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD--DSLNFY 246
+VSV + + +Y KC +++AEL++ + + + +V+ +II Y +K D + Y
Sbjct: 293 NVSVVTSLVCSYVKCGYIELAELIY--MSKLKKNLVALTAIIS--HYAEKGDMGSVVRLY 348
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
+ + + D +V ++ P+ + G H +G+ G +D V N ISMYSK
Sbjct: 349 SIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKF 408
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
+ID+ LF M +T SW ++IS AQ G +A+ LF M +G PD +T+ S++
Sbjct: 409 DNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLL 468
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S C Q+G L G+ Y L V AL+DMY KCG + A +F ++ E +
Sbjct: 469 SACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLA 528
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW ++I+G L G AL + +MME ++PN++TF +L ACTH G +E+G YF +M
Sbjct: 529 SWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIM 588
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
K + + PE H + M +LGR G +EA+ F+Q+M D+ +WG LL AC IH+ +++
Sbjct: 589 KKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKL 648
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
GE VA +LF + +V M+N+YA RW+ VA +R MM+ G SLV
Sbjct: 649 GESVAKKLFFSNCSNGGFFVLMSNLYAASRRWNDVARIRKMMREMGEDGCSGVSLV 704
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/567 (27%), Positives = 268/567 (47%), Gaps = 43/567 (7%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA-------------- 63
++ ++S + V+ LLLFR + ++ ++PN+ TF + KA
Sbjct: 14 SLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSF 73
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C++ ++ + + H +K F ++V T +D+Y+K + A +LFD P++DV SW
Sbjct: 74 CSE-NEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NA+I G+ + G LF MR T++ L + + KS+H G+
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVK 192
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G+D D V N +S Y KC DL +L+F I E ++VVSWN++IG F +++
Sbjct: 193 AGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITE--KSVVSWNTMIGAFGQNGLFSEAM 250
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
++ M+ + + T+VS+LS A +H + G +VSV+ +L+ Y
Sbjct: 251 LVFKQMLEESVNANSVTMVSILS------ANANTGCIHCYATKIGLVENVSVVTSLVCSY 304
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
KCG I+ A ++ + V+ TA+IS YA+KGD+ +RL+ ++ D V ++
Sbjct: 305 VKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMV 364
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+I G + +G F Y GL + +V N I MYSK +I LF + +K
Sbjct: 365 GIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKK 424
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
T+ SW ++I+ CA G ++A+ LF QM P+ +T ++L AC G L G
Sbjct: 425 TLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGE--- 481
Query: 484 NLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
L + + N +L + + + D+ + G++ A + +SM A W +L+
Sbjct: 482 ILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLAS-WNSLIS----- 535
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEM 568
Y LF H+ Y EM
Sbjct: 536 ---------GYGLFGFHNHALLCYTEM 553
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 312/586 (53%), Gaps = 6/586 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W + N+A AL +FR M+ + +E N+ T + AC + S + +H
Sbjct: 137 SVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVH 196
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFL 136
+ KS F+ D V ++ M +K ++ + ++F+ + D R N M+ F+Q
Sbjct: 197 AWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKP 256
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K + LF M G+ D +V L L+L K VHS+ + G+ D++V ++
Sbjct: 257 GKAIRLFTRMLQEGLNPDEFSVCSLLSVL---DCLNLGKQVHSYTLKSGLILDLTVGSSL 313
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+KC L+ + +F+ I + W S+I G +++ + M+ +G P
Sbjct: 314 FTMYSKCGSLEESYSLFQEIP--FKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSP 371
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D +T+ ++L+ C +L + + +H + + G D + + + L++ YSKCG + AR ++
Sbjct: 372 DESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVY 431
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + + VS +++ISGY+Q G + + LF M +G D + S++ S E
Sbjct: 432 DRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESE 491
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG Y GL V ++L+ MYSK GSI D + F + +++WT +IA A
Sbjct: 492 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYA 551
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G+ EAL ++ M E +P++VTF+ VL AC+H G +E+G+ + N M K Y + PE
Sbjct: 552 QHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPEN 611
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM D LGR G+L+EA +F+ + PIK DA +WGTLL ACKI+ ++E+G+ A + E
Sbjct: 612 RHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIE 671
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
LEP A YV ++NI A G WD V R +MK V+K PG S V
Sbjct: 672 LEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 717
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 244/482 (50%), Gaps = 10/482 (2%)
Query: 12 KIYR---SSTINQWNSQIREAVDKNEAHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKL 67
K++R S+ + WN+ I A+ +N+ + A+ LF M +P++ T+ + ACA L
Sbjct: 28 KVFRDTLSANVYCWNTIIAGAL-RNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACASL 86
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ + +++ ++K D+FV T++VD+YAKC + A ++F ++ + V SW M+
Sbjct: 87 EELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVML 145
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ + L +F MR G++ + TV + A + VH++ G
Sbjct: 146 SGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 205
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
D SV IS +K D+ ++E VF +++ R + N ++ + K ++ +
Sbjct: 206 LDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV-NVMVTSFSQNKKPGKAIRLFT 264
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +G PD +V SLLS C L G+ VHS+ + G LD++V ++L +MYSKCG
Sbjct: 265 RMLQEGLNPDEFSVCSLLSVLDC---LNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCG 321
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++ + LF + + W +MISG+ + G L EA+ LF M G PD T+ ++++
Sbjct: 322 SLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLT 381
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C +L K Y G+ + + +AL++ YSKCGS+ AR+++ LPE VS
Sbjct: 382 VCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVS 441
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
+++I+G + +G + LF M+ + ++L+A + E G +T
Sbjct: 442 CSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYIT 501
Query: 488 KV 489
K+
Sbjct: 502 KI 503
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 206/446 (46%), Gaps = 35/446 (7%)
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
VQ++++D ++K R + AYK+F +V WN +I G + V LF+ M
Sbjct: 9 VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ D T + A + L K V + I G + DV VC + + YAKC + A
Sbjct: 69 QKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAR 127
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
VF I +VVSW ++ G T + +L +R M + G + TV S++S+C
Sbjct: 128 EVFSRISN--PSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGR 185
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVSWTA 329
P + + VH+ GF LD SV LISM SK GDI+ + +F+ + D R +
Sbjct: 186 PSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNV 245
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
M++ ++Q +A+RLF M G PD +V S++S L LGK +Y G
Sbjct: 246 MVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVL---DCLNLGKQVHSYTLKSG 302
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L ++ V ++L MYSKCGS+ ++ LF +P K W +MI+G G EA+ LF
Sbjct: 303 LILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFS 362
Query: 450 QMMELDLRPNRVTFLAVLQACT-----------HAGFLEKGW-----------------G 481
+M++ P+ T AVL C+ H L G G
Sbjct: 363 EMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCG 422
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLG 507
L KVY PE++ SC + + G
Sbjct: 423 SLKLARKVYDRLPEMDPVSCSSLISG 448
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 168/350 (48%), Gaps = 19/350 (5%)
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V ++ I A++K + A VFR V WN+II G + + + H +
Sbjct: 9 VQSSLIDAFSKNLRFEDAYKVFRDTLSA--NVYCWNTIIAGALRNQNYGAVFDLF-HEMC 65
Query: 252 DGF-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+GF +PD T S+L++C E L G++V + I G + DV V +++ +Y+KCG +
Sbjct: 66 NGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMA 124
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR +F + + + VSWT M+SGY + D AL +F M +G + TV S+IS CG
Sbjct: 125 EAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACG 184
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE---KTVVS 427
+ + + G + V ALI M SK G I + +F L + + +V+
Sbjct: 185 RPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN 244
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA--CTHAGFLEKGWGYFNL 485
M+ + N + +A+ LF +M++ L P+ + ++L C + G K + L
Sbjct: 245 --VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLG---KQVHSYTL 299
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + +L S + + + G L+E+ Q +P K +A W +++
Sbjct: 300 KSGLIL---DLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNA-CWASMI 345
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+V ++LID +SK DA ++F V W T+IAG N + DLFH+M
Sbjct: 8 VVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNG 67
Query: 455 DLRPNRVTFLAVLQAC 470
+P+ T+ +VL AC
Sbjct: 68 FQKPDSYTYSSVLAAC 83
>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 804
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 298/553 (53%), Gaps = 4/553 (0%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
PN++T + +A + L ++I G ++K F S++ V T ++ Y+ D + +K+
Sbjct: 8 PNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYD-MGIVWKI 66
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
F++ P +D+ W+AM+ + G + +F M+ G++ + V+++ + A + L
Sbjct: 67 FNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGAL 126
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
K +H F I +V N+ + YAKC + K + LVF I E + ++SW +II
Sbjct: 127 LFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILE--KDLISWTTIIR 184
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
GC D ++ + M + F D T V L+ + + + G H + G
Sbjct: 185 GCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLA 244
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
VS+ L+ MY+K G+++SA +FD + + +SW+AMIS +A AL F M+
Sbjct: 245 FVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQ 304
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ E P+ +T +S++ C GA ELG+ +A G N + +ALID+Y K G I
Sbjct: 305 STDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRIN 364
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
R +F +P K +V W++MI G LNG EAL+ F M+ ++PN V F++VL AC+
Sbjct: 365 QGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACS 424
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
H G +GW F+ M + Y + P+L HY+CM DL+ R+G ++ AL FV MP++ D IW
Sbjct: 425 HCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIW 484
Query: 532 GTLLCACK-IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
G LL C+ H +IEI E VA RL L+P + + YV ++N+YA GRW V LR ++
Sbjct: 485 GALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDE 544
Query: 591 NQVKKFPGQSLVH 603
+KK G +H
Sbjct: 545 KGLKKEMGYKPLH 557
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 227/485 (46%), Gaps = 15/485 (3%)
Query: 12 KIYRSSTINQ---WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
KI+ + I W++ + V + +A +FR M+ + +EPN+++ I ACA +
Sbjct: 65 KIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVG 124
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
L+ + IHG +K F V ++VDMYAKC + +FD++ ++D+ SW +I
Sbjct: 125 ALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIR 184
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G + + F M+ AD V L A I A + H F + G+ A
Sbjct: 185 GCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLA 244
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
VS+ + YAK +L+ A +VF + + + +SW+++I + ++L ++
Sbjct: 245 FVSIGTALLQMYAKFGELESAIIVFDQLNK--KDYISWSAMISVHAHSRHPYNALETFKQ 302
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M RP+ T VSLL +C A G + +H G+ + + + LI +Y K G
Sbjct: 303 MQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGR 362
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
I+ R +F+ + + V W++MI+GY G DEAL F M A G P+ V +S++S
Sbjct: 363 INQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSA 422
Query: 369 CGQSGALELGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTV 425
C G LE W F + G+ + ++D+ S+ G+I A + +P E
Sbjct: 423 CSHCG-LEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDK 481
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFN 484
W ++AGC +E +L + + + L P ++ +L + E+G WG
Sbjct: 482 RIWGALLAGCRSTHGSIEIAELVAERL-IGLDPQNTSYYVILSNL----YAEQGRWGDVE 536
Query: 485 LMTKV 489
+ K+
Sbjct: 537 RLRKL 541
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 269/502 (53%), Gaps = 4/502 (0%)
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSL 173
P +N ++ F G E L LF M AD T ++ L +
Sbjct: 79 PPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDV 138
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ V ++ + G+ AD V ++ I YA C D+ A LVF EE VV WN+I+
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEES--GVVMWNAIVAAY 196
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+ + + ++ M+ G D T+VS++++C G+ V H G +
Sbjct: 197 LKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNP 256
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
++ L+ MY+KCG+I AR LFDGM R V+W+AMISGY Q EAL LF M+ A
Sbjct: 257 KLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLA 316
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
P+ VT++S++S C GALE GKW +Y L ++ AL+D Y+KCG I DA
Sbjct: 317 RVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDA 376
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
E F ++P K +WT +I G A NG EAL+LF M E + P VTF+ VL AC+H+
Sbjct: 377 VEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHS 436
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
+E+G +F+ M + Y + P + HY CM DLLGR G + EA F+++MPI+ +A IW
Sbjct: 437 CLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRA 496
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL +C +HRN+ IGE ++ L P + YV ++NIYA G+W A +R MK +
Sbjct: 497 LLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGI 556
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
+K PG SL+ ++G F ED
Sbjct: 557 EKTPGCSLIELDGVVFEFFAED 578
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 6/438 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
+N +R + AL LF M + + T K+C+++ + + +
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
VK +D FV ++++ MYA C + A +FD + V WNA++ + + G +V
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ +F M VG+ D VT++ + A L K V G+ + + +
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC ++ A +F G++ R VV+W+++I G T D+ ++L + M P+
Sbjct: 266 YAKCGEIGKARRLFDGMQS--RDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+VS+LS+C AL G+ VHS+ L + L+ Y+KCG ID A F+ M
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM 383
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
+ +WTA+I G A G EAL LF +M AG P VT + ++ C S +E G
Sbjct: 384 PVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGR 443
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
+ FD+ A G+K V ++D+ + G + +A + +P E V W +++ CA+
Sbjct: 444 RHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAV 503
Query: 438 NGEFVEALDLFHQMMELD 455
+ + Q++ L+
Sbjct: 504 HRNVGIGEEALKQIISLN 521
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 161/360 (44%), Gaps = 8/360 (2%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN+ + + + + + +F+ M + + + +T + AC ++ D + +
Sbjct: 184 SGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWV 243
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
GH+ + + + T ++DMYAKC + A +LFD M RDV +W+AMI G+ Q
Sbjct: 244 AGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQC 303
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L LF M+L ++ + VT++ + A L K VHS+ + +
Sbjct: 304 REALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTAL 363
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC + A F + ++ +W ++I G + ++L + M G P
Sbjct: 364 VDFYAKCGCIDDAVEAFESMP--VKNSWTWTALIKGMATNGRGREALELFSSMREAGIEP 421
Query: 257 DVTTVVSLLSSCVCPEALVQGRL-VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RF 314
T + +L +C + +GR S YG V ++ + + G +D A +F
Sbjct: 422 TDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQF 481
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDL---DEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ + V W A++S A ++ +EAL+ ++ + D V + ++ + GQ
Sbjct: 482 IRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPS-HSGDYVLLSNIYASAGQ 540
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL +S + W++ I ++ +AL LF M+ +EPN++T + ACA L
Sbjct: 277 RLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLG 336
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ +H ++ + + T +VD YAKC +D A + F+ MP ++ +W A+I
Sbjct: 337 ALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 396
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G A G + L LF +MR GI+ VT +G+ A H+
Sbjct: 397 GMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHS 436
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 316/588 (53%), Gaps = 10/588 (1%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTF--PFIAKACAKLSDFLYSQMIHGHI 80
+ I+ V H+ L F ++ + N++ F P + KAC+ + +H
Sbjct: 33 SDHIKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLA 92
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ ++D V +++ MYAK ++ A ++FD MP RD +WN+MI + Q G L + L
Sbjct: 93 FITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEAL 152
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS--LLKSVHSFGI---HIGVDADVSVCNT 195
+ + +G + + L + + +H + I + V +
Sbjct: 153 QMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTA 212
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ Y +C D MA VF +E ++ VSW ++I GC +D +L YR M +G
Sbjct: 213 FVDFYFRCGDSLMARSVFDEME--VKNEVSWTAVISGCANNQDYDVALACYREMQVEGVS 270
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARF 314
P+ T+++LL++C P + G+ +H + GFD S LI +Y +CG + A
Sbjct: 271 PNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAER 330
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+G R V W+++I YA++G+ D+AL+LF M P+ VT+L++IS C +
Sbjct: 331 IFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSS 390
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ G Y G+ ++ VCNALI+MY+KCGS+ D+R++F +P + V+W +MI+
Sbjct: 391 FKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISA 450
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
L+G +AL F++M E ++ + VTFLAVL AC HAG + +G F + ++
Sbjct: 451 YGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPI 510
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HY+C+ DL GR GKL++AL+ +++MP+K A IW +L+ +CK+H ++I E ++ +L
Sbjct: 511 TIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQL 570
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
EP++AA Y ++ I+A GRW + +R MK +++K G S +
Sbjct: 571 IRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRI 618
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 17/265 (6%)
Query: 11 NKIYRSSTINQ---WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
+I+ S++ W+S I + E+ KAL LF +M+ + EPN +T + AC L
Sbjct: 329 ERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNL 388
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
S F + +IHG+I+K IFV +++MYAKC LD + K+F +MP RD +WN+MI
Sbjct: 389 SSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMI 448
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
+ G+ E+ L FY M+ G++ D VT + + A HA L+ + D
Sbjct: 449 SAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHA---GLVTEGQQLFEQVNAD 505
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS------WNSIIGGCTYGDKFDD 241
++ + I YA DL E LRT+ W+S++ C + D
Sbjct: 506 CEIPIT---IEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDI 562
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLS 266
+ + +I P+ +LLS
Sbjct: 563 AESLSSQLIRS--EPNNAASYTLLS 585
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 169/368 (45%), Gaps = 19/368 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + AL +R M+ + PN +T + ACA+ Y + IHG+
Sbjct: 241 WTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAF 300
Query: 82 KSPFWSDIFVQTTMVDMYAKCDR-LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ F S ++ +Y +C + L A ++F+ RDV W+++I +A+ G +K L
Sbjct: 301 RRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKAL 360
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF MR + ++VT++ + A + +H + + G+ + VCN I+ Y
Sbjct: 361 KLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMY 420
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC L + +F +E R V+WNS+I + +L + M G + D T
Sbjct: 421 AKCGSLDDSRKIF--LEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVT 478
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN--TLISMYSKCGDIDSARFLFDG 318
+++LS+C + +G+ + ++ ++ +++ + LI ++ + G ++ A +
Sbjct: 479 FLAVLSACNHAGLVTEGQQLFEQ-VNADCEIPITIEHYACLIDLHGRSGKLEDALEILRT 537
Query: 319 MCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV---TVLSMISGCGQSGA 374
M + W++++S G LD A L + + P+ T+LSMI
Sbjct: 538 MPMKPSARIWSSLVSSCKLHGRLDIAESL--SSQLIRSEPNNAASYTLLSMIHA------ 589
Query: 375 LELGKWFD 382
E G+W D
Sbjct: 590 -EKGRWLD 596
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 195/586 (33%), Positives = 307/586 (52%), Gaps = 5/586 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ +R V AL LF M P+ T+P + KAC LS IHG
Sbjct: 80 WNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQT 139
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K + SD FVQ T++ MY + A +FD M +R V SWN MI G+ + E +
Sbjct: 140 FKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAV 199
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ M VG++ D TV+ + A K++ L + VH+ G ++ V N + Y
Sbjct: 200 NVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMY 259
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC +K A L+ +G+++ + VV+W ++I G +L M +G +P+ +
Sbjct: 260 VKCGQMKEAWLLAKGMDD--KDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVS 317
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ SLLS+C L G+ +H+ I + +V V LI+MY+KC + + +F G
Sbjct: 318 IASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTS 377
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ W A++SG+ Q EA+ LF M PD T S++ L+
Sbjct: 378 KKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMN 437
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKTVVSWTTMIAGCALN 438
Y G + V + L+D+YSKCGS+G A ++F +L +K ++ W+ +IA +
Sbjct: 438 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKH 497
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G A+ LF+QM++ ++PN VTF +VL AC+HAG + +G+ FN M K +Q+ ++H
Sbjct: 498 GHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDH 557
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM DLLGR G+L +A + +++MPI + +WG LL AC IH N+E+GE A F+LE
Sbjct: 558 YTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLE 617
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
P + YV +A +YA GRW +R M+ ++K P SL+ +
Sbjct: 618 PENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEV 663
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 203/398 (51%), Gaps = 3/398 (0%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H I+ +S + + + YA+C A LFDK+ + SWNAM+ + Q
Sbjct: 30 TKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQ 89
Query: 133 MGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+G L LF M G D T + +A + + +H G D+D
Sbjct: 90 IGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTF 149
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V NT ++ Y + + A+LVF ++E RTV+SWN++I G + +D++N Y M+
Sbjct: 150 VQNTLLAMYMNAGEKEAAQLVFDPMQE--RTVISWNTMINGYFRNNCAEDAVNVYGRMMD 207
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G PD TVVS+L +C + + GR VH+ GF ++ V N L+ MY KCG +
Sbjct: 208 VGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKE 267
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A L GM D+ V+WT +I+GY GD AL L M+ G P+ V++ S++S CG
Sbjct: 268 AWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGS 327
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
L GK +A ++ V+V ALI+MY+KC + ++F +K W +
Sbjct: 328 LVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNAL 387
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
++G N EA++LF QM+ D++P+ TF ++L A
Sbjct: 388 LSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPA 425
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 213/457 (46%), Gaps = 25/457 (5%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ T+ WN+ I N A A+ ++ RM +EP+ T + AC L + +
Sbjct: 175 QERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGR 234
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H + + FW +I V+ +VDMY KC ++ A+ L M D+DV +W +I G+ G
Sbjct: 235 EVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNG 294
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
L L M+ G++ + V++ L A +L+ K +H++ I ++++V V
Sbjct: 295 DARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVET 354
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I+ YAKCN ++ VF G + + WN+++ G +++ ++ M+
Sbjct: 355 ALINMYAKCNCGNLSYKVFMGTSK--KRTAPWNALLSGFIQNRLAREAIELFKQMLVKDV 412
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD T SLL + L Q +H + I GF + V + L+ +YSKCG + A
Sbjct: 413 QPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQ 472
Query: 315 LFD--GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F+ + D+ + W+A+I+ Y + G A++LF M +G P+ VT S++ C +
Sbjct: 473 IFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHA 532
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNA-----LIDMYSKCGSIGDARELFYALP-EKTVV 426
G + G N+ LK + ++ + +ID+ + G + DA L +P
Sbjct: 533 GLVNEGFSLFNFM----LKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHA 588
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
W ++ C + H+ +EL R TF
Sbjct: 589 VWGALLGACVI-----------HENVELGEVAARWTF 614
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 130/286 (45%), Gaps = 27/286 (9%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL ++ + + +H+ + G ++ + L + Y++C A LFD +
Sbjct: 16 SLLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQP 75
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VPDLVTVLSMISGCGQSGALELGKWF 381
SW AM+ Y Q G +AL LF M +G +PD T +I CG +++G
Sbjct: 76 CLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGI 135
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G + V N L+ MY G A+ +F + E+TV+SW TMI G N
Sbjct: 136 HGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCA 195
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQAC-----------THAGFLEKG-WGYFNLMTKV 489
+A++++ +MM++ + P+ T ++VL AC H EKG WG N++ +
Sbjct: 196 EDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWG--NIVVR- 252
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + D+ + G++KEA + M K D W TL+
Sbjct: 253 ----------NALVDMYVKCGQMKEAWLLAKGMDDK-DVVTWTTLI 287
>gi|297833250|ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 676
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 300/576 (52%), Gaps = 18/576 (3%)
Query: 53 NNLTFPFIAKACAKLSDFLY-SQMIHGHIVKSPFWSD----------IFVQTTMVDMYAK 101
N++ + C + F Y +H IVK+P + D + V +++ +Y K
Sbjct: 43 NHVDMSLLLSICGREGWFPYLGPCLHASIVKNPEFFDPVDADIHRNALVVWNSLLSLYVK 102
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG--IQADFVTVM 159
C +L A KLFD+MP RDV S N + GF + E L M G QA V+
Sbjct: 103 CGKLGDALKLFDEMPVRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDQATLTIVL 162
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
+ + + K +H+ I G D ++SV N I++Y KC VF E
Sbjct: 163 SVCDTP---EFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRWVFS--EMA 217
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
R V++W ++I G + +D L + M P+ T +S L++C + +V+G+
Sbjct: 218 HRNVITWTAVISGLIENELHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMIVEGQQ 277
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
+H+ +G + ++ + + L+ MYSKCG I+ A +F+ + VS T ++ G AQ G
Sbjct: 278 IHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGLAQNGS 337
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
+EA++ F M AG D V +++ +L LGK + N V N
Sbjct: 338 EEEAIQFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNTFVNNG 397
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LI+MYSKCG + D++ +F +P++ VSW +MIA A +G + AL L+ +M L+++P
Sbjct: 398 LINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPT 457
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VTFL++L AC+H G ++KG N M +V+ + P HY+C+ D+LGR G +KEA F+
Sbjct: 458 DVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKSFI 517
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
S+P+K D IW LL AC H + E+GEY A +LFE P S+A ++ MANIY+ G+W
Sbjct: 518 DSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFETAPDSSAAHILMANIYSSRGKWK 577
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A MK V K G S + + KT +F VED
Sbjct: 578 ERAKTIKRMKEMGVTKETGISWIEMEKKTHSFVVED 613
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 6/323 (1%)
Query: 22 WNSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I ++ NE H+ L LF M++ + PN++T+ AC+ + Q IH +
Sbjct: 224 WTAVISGLIE-NELHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMIVEGQQIHALL 282
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K S++ +++ ++DMY+KC ++ A+K+F+ + D S ++VG AQ G E+ +
Sbjct: 283 WKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGLAQNGSEEEAI 342
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M G++ D V + + L L K +HS I + V N I+ Y
Sbjct: 343 QFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNTFVNNGLINMY 402
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC DL ++ VFR + + R VSWNS+I +L Y M +P T
Sbjct: 403 SKCGDLTDSQTVFRRMPK--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Query: 261 VVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+SLL +C + +GR L++ +G +I M + G + A+ D +
Sbjct: 461 FLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKSFIDSL 520
Query: 320 CDRTRVS-WTAMISGYAQKGDLD 341
+ W A++ + GD +
Sbjct: 521 PLKPDCKIWQALLGACSFHGDTE 543
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 297/584 (50%), Gaps = 38/584 (6%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N+ +A LF +M++ EP+ +TF + C + I+K + S + V
Sbjct: 123 NQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVG 182
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
T+VD Y K +RLD A +LF +MP+ D ++ A VLC
Sbjct: 183 NTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAA-------------VLC----------- 218
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
A I + L + +HSF I +V V N + Y+K + + A +
Sbjct: 219 -----------ANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 267
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + E + VS+N II G + K + + +R + + F ++LS
Sbjct: 268 FDEMPE--QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTL 325
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
GR +H+ I D ++ V N+L+ MY+KCG + A +F + R+ V WTAMIS
Sbjct: 326 DWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMIS 385
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y QKG +E L+LF M A + D T S++ +L LGK ++ G
Sbjct: 386 AYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMS 445
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
NV +AL+D+Y+KCGSI DA + F +P++ +VSW MI+ A NGE L F +M+
Sbjct: 446 NVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMV 505
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
L+P+ V+FL VL AC+H+G +E+G +FN MT++Y+++P HY+ + D+L R G+
Sbjct: 506 LSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRF 565
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-HSAAPYVEMANI 571
EA + MPI D +W ++L AC+IH+N E+ A +LF +E AAPYV M+NI
Sbjct: 566 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNI 625
Query: 572 YALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YA G+W+ V+ + M+ VKK P S V I +T F+ D
Sbjct: 626 YAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSAND 669
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 210/442 (47%), Gaps = 21/442 (4%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK--LSDFLYSQMIHGHI 80
N+ + N A LF+ M + D +F F A CA L D + Q IH +
Sbjct: 183 NTLVDSYCKSNRLDLACQLFKEMPEID------SFTFAAVLCANIGLDDIVLGQQIHSFV 236
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K+ F ++FV ++D Y+K D + A KLFD+MP++D S+N +I G+A G +
Sbjct: 237 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 296
Query: 141 CLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
LF ++ Q F T++ + + + + +H+ I D+++ V N+ +
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSIASNTL---DWEMGRQIHAQTIVTTADSEILVGNSLV 353
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + AE++F + R+ V W ++I +++ L + M D
Sbjct: 354 DMYAKCGKFEEAEMIFTNLTH--RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIAD 411
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T SLL + +L G+ +HS I GF +V + L+ +Y+KCG I A F
Sbjct: 412 QATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 471
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M DR VSW AMIS YAQ G+ + L+ F M +G PD V+ L ++S C SG +E
Sbjct: 472 EMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEE 531
Query: 378 GKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G W F++ L +++DM + G +A +L +P + + W++++ C
Sbjct: 532 GLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNAC 591
Query: 436 AL--NGEFV-EALDLFHQMMEL 454
+ N E A D M EL
Sbjct: 592 RIHKNQELARRAADQLFNMEEL 613
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 206/493 (41%), Gaps = 70/493 (14%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP------------------- 116
I IVK+ F D V + K L A +LF+KMP
Sbjct: 34 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93
Query: 117 ------------DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
+R +W +I G++Q+ ++ LF M+ G + D+VT + L
Sbjct: 94 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ + + V + I +G D+ + V NT + +Y K N L +A +F+ + E
Sbjct: 154 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE------ 207
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
D F T ++L + + + +V G+ +HS
Sbjct: 208 --------------------------IDSF-----TFAAVLCANIGLDDIVLGQQIHSFV 236
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
I F +V V N L+ YSK + AR LFD M ++ VS+ +ISGYA G A
Sbjct: 237 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 296
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
LF ++ +M+S + E+G+ ++V N+L+DMY
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMY 356
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCG +A +F L ++ V WT MI+ G + E L LF++M + + ++ TF
Sbjct: 357 AKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFA 416
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
++L+A L G + + K ++ + S + D+ + G +K+A+ Q MP
Sbjct: 417 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG-SALLDVYAKCGSIKDAVQTFQEMPD 475
Query: 525 KSDAGIWGTLLCA 537
++ W ++ A
Sbjct: 476 RNIVS-WNAMISA 487
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Query: 11 NKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF 70
N +RS+ W + I V K + L LF +M++ + + TF + +A A ++
Sbjct: 371 NLTHRSAV--PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 428
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ +H I+KS F S++F + ++D+YAKC + A + F +MPDR++ SWNAMI +
Sbjct: 429 SLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAY 488
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
AQ G E L F M L G+Q D V+ +G+ A H+
Sbjct: 489 AQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 526
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 195/595 (32%), Positives = 321/595 (53%), Gaps = 16/595 (2%)
Query: 32 KNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF----LYSQMIHGHIVKSPF-- 85
+++ +A +F+ MK + +E N ++ + A + S+ Q +H +++++
Sbjct: 329 QHQGEEAAKIFKEMK-DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVD 387
Query: 86 -WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFY 144
W I + +V++YAKC+ +D A +F MP +D SWN++I G E+ + F+
Sbjct: 388 VW--ILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFH 445
Query: 145 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
MR G+ +V+ + + L + +H GI G+D DVSV N ++ YA+ +
Sbjct: 446 TMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETD 505
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVS 263
++ + VF + E VSWNS IG T ++ ++ M+ G++P+ T ++
Sbjct: 506 CMEEYQKVFFLMPE--YDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFIN 563
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+LS+ L GR +H+ + + D ++ NTL++ Y KC ++ +F M +R
Sbjct: 564 ILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERR 623
Query: 324 -RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSW AMISGY G L +A+ L + M G+ D T+ +++S C LE G
Sbjct: 624 DEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVH 683
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
A L+ V+V +AL+DMY+KCG I A F +P + + SW +MI+G A +G
Sbjct: 684 ACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGG 743
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
+AL LF QM + P+ VTF+ VL AC+H G +++G+ +F M +VY++ P + H+SCM
Sbjct: 744 KALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCM 803
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC--KIHRNIEIGEYVAYRLFELEPH 560
DLLGR G +K+ +F+++MP+ +A IW T+L AC RN E+G A L ELEP
Sbjct: 804 VDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPL 863
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++N++A GG+W+ V R M+ +VKK G S V + F D
Sbjct: 864 NAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGD 918
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 220/460 (47%), Gaps = 13/460 (2%)
Query: 22 WNSQIREAVDKNEA-HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I +D NE +A+ F M++N + P+ + +CA L + Q IHG
Sbjct: 424 WNSII-SGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEG 482
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA-QMGFLEKV 139
+K D+ V ++ +YA+ D ++ K+F MP+ D SWN+ I A + +
Sbjct: 483 IKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQA 542
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ F M G + + VT + + A L L + +H+ + V D ++ NT ++
Sbjct: 543 IKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAF 602
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC ++ E++F + E R VSWN++I G + ++ M+ G R D
Sbjct: 603 YGKCEQMEDCEIIFSRMSER-RDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDF 661
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ ++LS+C L +G VH+ I + +V V + L+ MY+KCG ID A F+ M
Sbjct: 662 TLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELM 721
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R SW +MISGYA+ G +AL+LF M+ G++PD VT + ++S C G ++ G
Sbjct: 722 PVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEG- 780
Query: 380 WFDNYACSG---GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
F+++ G L + + ++D+ + G + E +P + W T++ C
Sbjct: 781 -FEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGAC 839
Query: 436 ALNGEFVEALDLFHQMMELDLRP-NRVTFLAVLQACTHAG 474
L M ++L P N V + VL + HA
Sbjct: 840 CRANSRNTELGRRAAKMLIELEPLNAVNY--VLLSNMHAA 877
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 224/446 (50%), Gaps = 20/446 (4%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS--QMIHGHIVKSPFWSDIFVQTT 94
+A +LFR + + PN+ +AC +L + IHG I KSP+ SD+ +
Sbjct: 123 EACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNV 182
Query: 95 MVDMYAKCD-RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
++ MY+ C +D A ++F+++ + ASWN++I + + G LF +M+ +
Sbjct: 183 LMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATEL 242
Query: 154 D-------FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
+ F +++ + + + L+LL+ + + D+ V + +S +A+ +
Sbjct: 243 NCRPNEYTFCSLVTVACSLVDCG-LTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLI 301
Query: 207 KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLS 266
A+++F +++ R V+ N ++ G + +++ ++ M D + ++ LLS
Sbjct: 302 DSAKMIFEQMDD--RNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLS 358
Query: 267 SCV----CPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ E +G+ VH++ I D+ + + N L+++Y+KC ID+AR +F M
Sbjct: 359 AFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPS 418
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW ++ISG +EA+ F M G VP +V+S +S C G + LG+
Sbjct: 419 KDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQI 478
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN-GE 440
GL +V V NAL+ +Y++ + + +++F+ +PE VSW + I A +
Sbjct: 479 HGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEAS 538
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAV 466
++A+ F +MM+ +PNRVTF+ +
Sbjct: 539 VLQAIKYFLEMMQAGWKPNRVTFINI 564
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 217/444 (48%), Gaps = 25/444 (5%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P NL + +C + D + +H I K+ SD+F T+V+++ + L A KL
Sbjct: 41 PLNLDYNRYRDSCT-VED---AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKL 96
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA--AIHAK 169
FD+MP +++ SW+ ++ G+AQ G ++ LF + G+ + + +A +
Sbjct: 97 FDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPN 156
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN-DLKMAELVFRGIEEGLRTVVSWNS 228
L L +H +D+ + N +S Y+ C+ + A VF I+ ++T SWNS
Sbjct: 157 MLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIK--MKTSASWNS 214
Query: 229 IIGG-CTYGD---KFDDSLNFYRHMIYDGFRPDVTTVVSLLS-SCV---CPEALVQGRLV 280
II C GD F + R RP+ T SL++ +C C L++ L
Sbjct: 215 IISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLA 274
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
F D+ V + L+S +++ G IDSA+ +F+ M DR V+ ++ G A++
Sbjct: 275 RIE--KSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQG 332
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW----FDNYACSGGLKDN-VM 395
+EA ++F M+ E+ + + ++S + L+ GK Y L D ++
Sbjct: 333 EEAAKIFKEMKDLVEI-NASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWIL 391
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ NAL+++Y+KC +I +AR +F +P K VSW ++I+G N F EA+ FH M
Sbjct: 392 IGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNG 451
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG 479
+ P++ + ++ L +C G++ G
Sbjct: 452 MVPSKFSVISTLSSCASLGWIMLG 475
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL +V CN L++++ + G++ A++LF +P+K +VSW+ +++G A NG EA LF
Sbjct: 69 GLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLF 128
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAG--FLEKGWGYFNLMTK 488
++ L PN + L+AC G L+ G L++K
Sbjct: 129 RGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 315/596 (52%), Gaps = 11/596 (1%)
Query: 24 SQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKS 83
S+I + E AL L + + +I + + + + C K+ F + IH H++KS
Sbjct: 29 SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 88
Query: 84 PFWSDIFVQTTMVDMYAKCDR-LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
D FV +++ +Y K K+FD + +DV SW +MI G+ ++G L L
Sbjct: 89 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 148
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F+ M G++ + T+ + +A L L + H + G D++ + + I + +
Sbjct: 149 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR 208
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GFRPDVTTV 261
L A +F + E + W SII T D FD++L F+ M D G PD T
Sbjct: 209 NCALDDARQLFDELLE--PDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTF 266
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++L++C L QG+ VH+ I GF +V V ++L+ MY KCG + ++ +FD M
Sbjct: 267 GTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPI 326
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW+A++ GY Q GD +++F ME DL +++ C A+ GK
Sbjct: 327 KNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEV 382
Query: 382 D-NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y GG +D V+V +AL+D+Y+KCG I A+ +F +P + +++W +MI G A NG
Sbjct: 383 HCQYIRKGGWRD-VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGR 441
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL +F+QM++ ++P+ ++F+ +L AC+H G +++G YF MTK Y + + HYS
Sbjct: 442 GEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYS 501
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G L+EA +++ + D+ +W LL AC N EI E +A R+ ELEP
Sbjct: 502 CMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPD 561
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI-NGKTCTFTVED 615
YV +AN+Y GRW+ +R +MK V K PG+S + N +F E+
Sbjct: 562 YHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGSSFDFEN 617
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 223/455 (49%), Gaps = 14/455 (3%)
Query: 8 PRLNKIYRS---STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
P K++ + W S I V + +L LF +M +EPN T + KAC
Sbjct: 112 PETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKAC 171
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
++L D ++ HG ++ F S+ + + ++DM+ + LD A +LFD++ + D W
Sbjct: 172 SELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWT 231
Query: 125 AMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
++I + F ++ L FY+M R G+ D T + A + L K VH+ I
Sbjct: 232 SIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVIT 291
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDS 242
G +V V ++ + Y KC + ++ +F + ++ VSW++++GG C GD F
Sbjct: 292 TGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMP--IKNSVSWSALLGGYCQNGD-FKSV 348
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
+ +R M + D+ ++L +C A+ QG+ VH I G DV V + L+ +
Sbjct: 349 IQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDL 404
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+KCG I+ A+ +FD M R ++W +MI G+AQ G +EALR+F M G PD ++
Sbjct: 405 YAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISF 464
Query: 363 LSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ ++ C G ++ G+ +F + G+K + + ++D+ + G + +A L
Sbjct: 465 IGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSD 524
Query: 422 EKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELD 455
+ S W ++ C + A + ++MEL+
Sbjct: 525 FRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 559
>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 300/571 (52%), Gaps = 8/571 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I AL +F ++ + P T + +C + + IHG
Sbjct: 6 IVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRSIHG 65
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+K+ D V+ + MYAK L+ A LF+++ D+ V SWN MI +A GF +
Sbjct: 66 FGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGFFNE 125
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ +F M ++ + VT+M L A I + +H + I G+ + SV + +
Sbjct: 126 SMLVFKRMVEQKVEVNPVTIMSLLPANISPEL------IHCYAIKTGLINNGSVVTSLVC 179
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC ++AEL++ + + +VS +II D + + M + D
Sbjct: 180 LYAKCGSTELAELLYWSFPQ--KNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDS 237
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+VS+L P + G +H + + G D V N LISMY K DI++A LF
Sbjct: 238 VAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYE 297
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M ++ +SW ++ISG Q G +A++ F M+ G PD +TV S+++GC Q G L LG
Sbjct: 298 MPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLG 357
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ NY L+ V +LIDMY+KCGSI A +F ++ E V +W TMI+G +
Sbjct: 358 ERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISGYSWY 417
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G AL+ + +M E L P+R+TFL VL AC H G L +G +F +MT+ + + P L H
Sbjct: 418 GLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMVPNLQH 477
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+CM LLGR G +EAL F+++M + D+ +WG LL AC IH+ I++GE +A +L+ L+
Sbjct: 478 CACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLAKKLYLLD 537
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
+ YV M+N+YA RW+ A +R +MK
Sbjct: 538 YKNCGLYVLMSNLYAATNRWNDAAKMREIMK 568
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 194/365 (53%), Gaps = 8/365 (2%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
M DRD+ SWNA+I G ++ G+ L +F + G T++GL + + +
Sbjct: 1 MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQG 60
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+S+H FGI G+D D V N YAK DL+ AEL+F +E+ ++VVSWN++IG
Sbjct: 61 RSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELED--KSVVSWNTMIGAYA 118
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
F++S+ ++ M+ + T++SLL + + PE L+H + I G + S
Sbjct: 119 GNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPANISPE------LIHCYAIKTGLINNGS 172
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V+ +L+ +Y+KCG + A L+ + VS TA+IS YA+KG++D + F M+
Sbjct: 173 VVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLD 232
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D V ++S++ G + +G YA GL + +V N LI MY K I A
Sbjct: 233 MKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAI 292
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
LFY +PEK ++SW ++I+GC G +A+ F QM L P+ +T ++L C+ G
Sbjct: 293 SLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLG 352
Query: 475 FLEKG 479
+L G
Sbjct: 353 YLRLG 357
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 206/426 (48%), Gaps = 10/426 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ I ++++L+F+RM + +E N +T + A + ++IH
Sbjct: 106 SVVSWNTMIGAYAGNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPAN------ISPELIH 159
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ +K+ ++ V T++V +YAKC + A L+ P +++ S A+I +A+ G ++
Sbjct: 160 CYAIKTGLINNGSVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMD 219
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
V+ F M+ + ++ D V ++ + H+S+ ++H + + G+D V N I
Sbjct: 220 LVVECFSRMQQLDMKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLI 279
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S Y K ND++ A +F + E + ++SWNS+I GC + D++ F+ M G PD
Sbjct: 280 SMYFKFNDIEAAISLFYEMPE--KPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPD 337
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
TV SLL+ C L G +H++ + +++ V +LI MY+KCG I A +F
Sbjct: 338 TITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFK 397
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + +W MISGY+ G AL + M G PD +T L +++ C G L
Sbjct: 398 SIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHE 457
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGC 435
G K F G+ N+ C ++ + + G +A + E W ++ C
Sbjct: 458 GKKHFQIMTEEFGMVPNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNAC 517
Query: 436 ALNGEF 441
++ E
Sbjct: 518 CIHQEI 523
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 308/595 (51%), Gaps = 3/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + +AL L+ RM + P+ TFP + ++C + D+ + +H H+
Sbjct: 162 SWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHV 221
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++ F ++ V ++ MYAKC + A K+FD M D SWNAMI G + G L
Sbjct: 222 LRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGL 281
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M +Q + +T+ +T A+ ++ K +H + G DV+ CN+ I Y
Sbjct: 282 ELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMY 341
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A + A VF ++ R +SW ++I G D +L Y M + PD T
Sbjct: 342 ASLGMMGQARTVFSRMDT--RDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDIT 399
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S L++C C +L G +H GF V V N L+ MY+K ID A +F M
Sbjct: 400 IASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMP 459
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ VSW++MI+G+ EAL F M A + P+ VT ++ ++ C +GAL GK
Sbjct: 460 EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVK-PNSVTFIAALAACAATGALRSGKE 518
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G+ + NALID+Y KCG G A F A K VVSW MIAG +G
Sbjct: 519 IHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGN 578
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL F+QM+++ P+ VTF+A+L AC+ G + +GW F+ MT Y + P L HY+
Sbjct: 579 GETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYA 638
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLL R G+L EA +F+ MPI DA +WG LL C+IHR++E+GE A + ELEP+
Sbjct: 639 CMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPN 698
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A +V + ++YA G WD +A +R M+ + G S V + G F +D
Sbjct: 699 DAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDD 753
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 202/379 (53%), Gaps = 3/379 (0%)
Query: 86 WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN 145
W + + M+ M + A+++F KMP+RDV SWN M+ G+ + G LE+ L L++
Sbjct: 126 WFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHR 185
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
M G++ D T + ++ + + VH+ + G +V V N ++ YAKC D
Sbjct: 186 MMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGD 245
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+ A VF + + +SWN++I G + + L + M+ D +P++ T+ S+
Sbjct: 246 VVAARKVFDSM--AVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVT 303
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
+ + + +H + GF DV+ N+LI MY+ G + AR +F M R +
Sbjct: 304 VASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAM 363
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SWTAMISGY + G D+AL ++ ME PD +T+ S ++ C G+L++G A
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 423
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
S G V+V NAL++MY+K I A E+F +PEK VVSW++MIAG N EAL
Sbjct: 424 ESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEAL 483
Query: 446 DLFHQMMELDLRPNRVTFL 464
F M+ D++PN VTF+
Sbjct: 484 YYFRHMLA-DVKPNSVTFI 501
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 256 PDVTTVVSLLSSCVCPEALVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD V+L C A+ G H+ H F L + N ++SM + G+ A
Sbjct: 92 PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLG--NAMLSMLVRFGETWHAW 149
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F M +R SW M+ GY + G L+EAL L+ M AG PD+ T ++ CG
Sbjct: 150 RVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 209
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+G+ + G + V V NAL+ MY+KCG + AR++F ++ +SW MIA
Sbjct: 210 DWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIA 269
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
G NGE L+LF M++ +++PN +T +V A
Sbjct: 270 GHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA 305
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G L +AL L +E++ E PD +++ C A+E G +A + +
Sbjct: 76 GQLAQALWL---LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLG 132
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NA++ M + G A +F +PE+ V SW M+ G G EALDL+H+MM +R
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR 192
Query: 458 PNRVTFLAVLQAC 470
P+ TF VL++C
Sbjct: 193 PDVYTFPCVLRSC 205
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 315/596 (52%), Gaps = 11/596 (1%)
Query: 24 SQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKS 83
S+I + E AL L + + +I + + + + C K+ F + IH H++KS
Sbjct: 88 SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 147
Query: 84 PFWSDIFVQTTMVDMYAKCDR-LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
D FV +++ +Y K K+FD + +DV SW +MI G+ ++G L L
Sbjct: 148 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 207
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F+ M G++ + T+ + +A L L + H + G D++ + + I + +
Sbjct: 208 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR 267
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GFRPDVTTV 261
L A +F + E + W SII T D FD++L F+ M D G PD T
Sbjct: 268 NCALDDARQLFDELLE--PDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTF 325
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++L++C L QG+ VH+ I GF +V V ++L+ MY KCG + ++ +FD M
Sbjct: 326 GTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPI 385
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW+A++ GY Q GD +++F ME DL +++ C A+ GK
Sbjct: 386 KNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEV 441
Query: 382 D-NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y GG +D V+V +AL+D+Y+KCG I A+ +F +P + +++W +MI G A NG
Sbjct: 442 HCQYIRKGGWRD-VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGR 500
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL +F+QM++ ++P+ ++F+ +L AC+H G +++G YF MTK Y + + HYS
Sbjct: 501 GEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYS 560
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G L+EA +++ + D+ +W LL AC N EI E +A R+ ELEP
Sbjct: 561 CMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPD 620
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI-NGKTCTFTVED 615
YV +AN+Y GRW+ +R +MK V K PG+S + N +F E+
Sbjct: 621 YHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGSSFDFEN 676
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 218/438 (49%), Gaps = 11/438 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I V + +L LF +M +EPN T + KAC++L D ++ HG ++
Sbjct: 188 WTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVL 247
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F S+ + + ++DM+ + LD A +LFD++ + D W ++I + F ++ L
Sbjct: 248 GRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALR 307
Query: 142 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
FY+M R G+ D T + A + L K VH+ I G +V V ++ + Y
Sbjct: 308 FFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMY 367
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVT 259
KC + ++ +F + ++ VSW++++GG C GD F + +R M + D+
Sbjct: 368 GKCGSVGESQRIFDRMP--IKNSVSWSALLGGYCQNGD-FKSVIQIFRKM----EKVDLY 420
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
++L +C A+ QG+ VH I G DV V + L+ +Y+KCG I+ A+ +FD M
Sbjct: 421 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 480
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R ++W +MI G+AQ G +EALR+F M G PD ++ + ++ C G ++ G+
Sbjct: 481 PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGR 540
Query: 380 -WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCAL 437
+F + G+K + + ++D+ + G + +A L + S W ++ C
Sbjct: 541 EYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTT 600
Query: 438 NGEFVEALDLFHQMMELD 455
+ A + ++MEL+
Sbjct: 601 CTNYEIAERIAKRVMELE 618
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 318/603 (52%), Gaps = 8/603 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + W + I + + L LF RM+ +PN+ TF A+
Sbjct: 159 KERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGL 218
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +VK+ I V +++++Y KC + A LFDK + V +WN+MI G+A G
Sbjct: 219 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 278
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L +FY+MRL ++ + + + + K L + +H + G D ++
Sbjct: 279 LDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRT 338
Query: 195 TWISAYAKCNDLKMAELVFRGIEEG-LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ AY+KC + A +F+ E G L VVSW ++I G D ++++ + M G
Sbjct: 339 ALMVAYSKCMAMLDALRLFK--ETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKG 396
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
RP+ T +L++ ++ VH+ + ++ +V L+ Y K G +D A
Sbjct: 397 VRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAA 452
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F G+ ++ V+W+AM++GYAQ G+ + A+++F + G P+ T S+++ C +
Sbjct: 453 KVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATT 512
Query: 374 A-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
A + GK F +A L ++ V +AL+ MY+K G I A E+F EK +VSW +MI
Sbjct: 513 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMI 572
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G A +G+ ++ALD+F +M + ++ + VTF+ V ACTHAG +E+G YF++M + ++
Sbjct: 573 SGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 632
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P H SCM DL R G+L++A+ + +MP + + IW T+L AC++H+ E+G A
Sbjct: 633 APTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAE 692
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
++ + P +A YV ++N+YA G W A +R +M VKK PG S + + KT F
Sbjct: 693 KIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFL 752
Query: 613 VED 615
D
Sbjct: 753 AGD 755
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 243/514 (47%), Gaps = 22/514 (4%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A LF ++ +E + F + K A L D L+ + +H +K F D+ V T++
Sbjct: 79 QEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSL 138
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD- 154
VD Y K +FD+M +R+V +W +I G+A+ E+VL LF M+ G Q +
Sbjct: 139 VDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNS 198
Query: 155 --FVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
F +G L + + + L VH+ + G+D + V N+ I+ Y KC +++ A +
Sbjct: 199 FTFAAALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 254
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
+F E +++VV+WNS+I G ++L + M + R ++ S++ C
Sbjct: 255 LFDKTE--VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANL 312
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSARFLFDGMCDRTRVSWTAM 330
+ L +H + YGF D ++ L+ YSKC +D+ R + VSWTAM
Sbjct: 313 KELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAM 372
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF--DNYACSG 388
ISG+ Q +EA+ LF M+ G P+ T +++ E+ NY S
Sbjct: 373 ISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS 432
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
V AL+D Y K G + +A ++F + K +V+W+ M+AG A GE A+ +F
Sbjct: 433 ------TVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIF 486
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLG 507
++ + ++PN TF ++L C A G G F+ +++ L S + +
Sbjct: 487 SELTKGGVKPNEFTFSSILNVCA-ATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 545
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+KG ++ A + + K D W +++ H
Sbjct: 546 KKGHIESAEEVFKRQREK-DLVSWNSMISGYAQH 578
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 181/373 (48%), Gaps = 7/373 (1%)
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
A RL A+ LFDK PDRD S+ +++ GF++ G ++ LF N++ +G++ D
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
+ + + + +H I G DVSV + + Y K ++ K VF ++E
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKE- 160
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR- 278
R VV+W ++I G ++ L + M +G +P+ T + L V E V GR
Sbjct: 161 -RNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALG--VLAEEGVGGRG 217
Query: 279 -LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
VH+ + G D + V N+LI++Y KCG++ AR LFD ++ V+W +MISGYA
Sbjct: 218 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G EAL +F++M + S+I C L + G + +
Sbjct: 278 GLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIR 337
Query: 398 NALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
AL+ YSKC ++ DA LF VVSWT MI+G N EA+ LF +M +
Sbjct: 338 TALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGV 397
Query: 457 RPNRVTFLAVLQA 469
RPN T+ +L A
Sbjct: 398 RPNEFTYSVILTA 410
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 131/254 (51%), Gaps = 4/254 (1%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL--SSCVCPEALVQGR 278
R S+ S++ G + + ++ + ++ + G D + S+L S+ +C E GR
Sbjct: 60 RDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELF--GR 117
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H I +GF DVSV +L+ Y K + R +FD M +R V+WT +ISGYA+
Sbjct: 118 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNS 177
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+E L LF M+ G P+ T + + + G G GL + V N
Sbjct: 178 LNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 237
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LI++Y KCG++ AR LF K+VV+W +MI+G A NG +EAL +F+ M +R
Sbjct: 238 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRL 297
Query: 459 NRVTFLAVLQACTH 472
+ +F ++++ C +
Sbjct: 298 SESSFASIIKLCAN 311
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K R + WNS I +A KAL +F+ MKK ++ +++TF + AC
Sbjct: 558 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHA---- 613
Query: 72 YSQMIHGHIVKSPFWSDIFVQ-----------TTMVDMYAKCDRLDCAYKLFDKMPD 117
G + + + DI V+ + MVD+Y++ +L+ A K+ D MP+
Sbjct: 614 ------GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPN 664
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 193/600 (32%), Positives = 309/600 (51%), Gaps = 3/600 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
S + WN + + + E +A+ F M + + + LTF + A L+ + I
Sbjct: 869 SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQI 928
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG +V+S + V +++MY K + A +F +M + D+ SWN MI G A G
Sbjct: 929 HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLE 988
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E + +F ++ G+ D TV + +A + L +H+ + GV D V T
Sbjct: 989 ECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTT 1048
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I Y+K ++ AE +F + + + SWN+++ G F +L Y M G R
Sbjct: 1049 LIDVYSKSGKMEEAEFLF--VNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGER 1106
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
+ T+ + + L QG+ + + + GF+LD+ VI+ ++ MY KCG+++SAR +
Sbjct: 1107 ANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRI 1166
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + V+WT MISG + G + AL + M + PD T +++ C AL
Sbjct: 1167 FNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTAL 1226
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E G+ + V +L+DMY+KCG+I DAR LF + SW MI G
Sbjct: 1227 EQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGL 1286
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G EAL F +M + P+RVTF+ VL AC+H+G + + + F M K+Y + PE
Sbjct: 1287 AQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPE 1346
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HYSC+ D L R G+++EA + SMP ++ A ++ TLL AC++ + E G+ VA +L
Sbjct: 1347 IEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLL 1406
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
LEP +A YV ++N+YA +W+ VA+ R MM++ VKK PG S V + K F D
Sbjct: 1407 ALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGD 1466
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 238/544 (43%), Gaps = 38/544 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + DK A LFR ++++ + T + K C + ++ +HG+ V
Sbjct: 697 WNAILSAHADK--ARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAV 754
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+FV +V++YAK R+ A LFD M RDV WN M+ + G + L
Sbjct: 755 KIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALL 814
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL---LKSVHSFGIHIGVDADVSVCNTWIS 198
LF G++ D VT+ L + + +K L LK + ++G +
Sbjct: 815 LFSEFNRTGLRPDDVTLCTLAR-VVKSKQNVLEWQLKQLKAYGTKL-------------- 859
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
++ ++G V++WN + + ++++ + MI D
Sbjct: 860 ------------FMYDDDDDG-SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDG 906
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T V +LS L G+ +H + G D VSV N LI+MY K G + AR +F
Sbjct: 907 LTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQ 966
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-SGALEL 377
M + VSW MISG A G + ++ +F + G +PD TV S++ C G L
Sbjct: 967 MNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHL 1026
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
A G+ + V LID+YSK G + +A LF + SW M+ G +
Sbjct: 1027 ATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIV 1086
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G+F +AL L+ M E R N++T +A L++G ++ K N +L
Sbjct: 1087 SGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVK-RGFNLDLF 1145
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE--IGEYVAYRLF 555
S + D+ + G+++ A +P D W T++ C + E + Y RL
Sbjct: 1146 VISGVLDMYLKCGEMESARRIFNEIPSPDDVA-WTTMISGCVENGQEEHALFTYHHMRLS 1204
Query: 556 ELEP 559
+++P
Sbjct: 1205 KVQP 1208
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 234/520 (45%), Gaps = 50/520 (9%)
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVASWNA 125
SD + H I+ S D F+ ++ MY+KC L A KLFD PD RD+ +WNA
Sbjct: 640 SDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNA 699
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
++ A LF +R + A T+ + + + + S +S+H + + IG
Sbjct: 700 ILSAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIG 757
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+ DV V ++ YAK ++ A ++F G+ GLR VV WN ++ ++L
Sbjct: 758 LQWDVFVAGALVNIYAKFGRIREARVLFDGM--GLRDVVLWNVMMKAYVDTGLEYEALLL 815
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ G RPD T+ +L + +++ +L + T + MY
Sbjct: 816 FSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQ-----------LKAYGTKLFMYDD 864
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
D ++W +S + Q+G+ EA+ F M + D +T + M
Sbjct: 865 DDDGSDV------------IAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVM 912
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+S LELGK GL V V N LI+MY K GS+ AR +F+ + E +
Sbjct: 913 LSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDL 972
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW TMI+GCAL+G ++ +F ++ L P++ T +VL+AC+ G G +L
Sbjct: 973 VSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG------GGCHL 1026
Query: 486 MTKVY----QVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
T+++ + L+ + + + D+ + GK++EA +F+ D W ++
Sbjct: 1027 ATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA-EFLFVNQDGFDLASWNAMM---- 1081
Query: 540 IHRNIEIGEYV-AYRLFEL--EPHSAAPYVEMANIYALGG 576
H I G++ A RL+ L E A + +AN G
Sbjct: 1082 -HGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAG 1120
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 4/203 (1%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S+L + L G+ H+ + G D + N LI+MYSKCG + SAR LFD D
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 323 TR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R V+W A++S +A K + LF + + T+ + C S + +
Sbjct: 691 SRDLVTWNAILSAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
YA GL+ +V V AL+++Y+K G I +AR LF + + VV W M+ G
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808
Query: 441 FVEALDLFHQMMELDLRPNRVTF 463
EAL LF + LRP+ VT
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVTL 831
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 153/377 (40%), Gaps = 29/377 (7%)
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
AI A L L K H+ + G D + N I+ Y+KC L A +F + R +V
Sbjct: 636 AIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLV 695
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
+WN+I+ + DK D + +R + T+ + C+ + +H +
Sbjct: 696 TWNAILSA--HADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYA 753
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ G DV V L+++Y+K G I AR LFDGM R V W M+ Y G EAL
Sbjct: 754 VKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEAL 813
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGC-GQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
LF G PD VT+ ++ + LE W + G K + M
Sbjct: 814 LLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLE---WQLKQLKAYGTK---------LFM 861
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y D V++W ++ GE EA+D F M+ + + +TF
Sbjct: 862 YDDDDDGSD------------VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTF 909
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
+ +L LE G ++ + ++ ++ +C+ ++ + G + A M
Sbjct: 910 VVMLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN 968
Query: 524 IKSDAGIWGTLLCACKI 540
+ D W T++ C +
Sbjct: 969 -EVDLVSWNTMISGCAL 984
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK--- 66
L K +S I WN+ I A +AL F MK + P+ +TF + AC+
Sbjct: 1267 LFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGL 1326
Query: 67 ----LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
+F Q I+G +I + +VD ++ R+ A K+ MP AS
Sbjct: 1327 VSEAYENFYSMQKIYG------IEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASAS 1380
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 203/595 (34%), Positives = 305/595 (51%), Gaps = 3/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + +AL L+ RM P+ TFP + ++C + D + +H H+
Sbjct: 162 SWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHV 221
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++ ++ V +V MYAKC ++ A K+FD M D SWNAMI G + E L
Sbjct: 222 LRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGL 281
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF +M ++ + +T+ +T A+ L K +H+ + G DV+ CN+ I Y
Sbjct: 282 ELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMY 341
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+ + A VF +E R +SW ++I G D +L Y M + PD T
Sbjct: 342 SSLGRMGEACTVFSRME--TRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVT 399
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V S L++C L G +H GF + V N L+ MY+K I+ A +F M
Sbjct: 400 VASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMP 459
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
D+ +SW++MI+G+ EAL F M A + P+ VT ++ ++ C +G+L GK
Sbjct: 460 DKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVK-PNSVTFIAALAACAATGSLRCGKE 518
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G+ V NAL+D+Y KCG G A F A K VVSW M+AG +G
Sbjct: 519 IHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGH 578
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL F++M+E P+ VTF+A+L C+ AG + +GW F+ MT+ Y + P L HY+
Sbjct: 579 GDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYA 638
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLL R G+L E +F+ MPI DA +WG LL C+IHRNIE+GE A + ELEP+
Sbjct: 639 CMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPN 698
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A +V ++++YA G W V+ +R M+ ++ G S V + G F +D
Sbjct: 699 DAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDD 753
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 211/387 (54%), Gaps = 3/387 (0%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
M+ M + A+K+F KMP+RDV SWN M+ G+ + GFLE+ L L++ M G +
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGAR 192
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T + ++ L++ + VH+ + G+ +V V N ++ YAKC D++ A V
Sbjct: 193 PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKV 252
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F G+ L +SWN++I G + + L + HM+ D P++ T+ S+ +
Sbjct: 253 FDGMS--LTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
L + +H+ + GF DV+ N+LI MYS G + A +F M R +SWTAMIS
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY + G D+AL ++ ME PD VTV S ++ C G L++G A S G
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIR 430
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
++V NAL++MY+K I A E+F +P+K V+SW++MIAG N + EAL F M+
Sbjct: 431 YIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML 490
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKG 479
D++PN VTF+A L AC G L G
Sbjct: 491 A-DVKPNSVTFIAALAACAATGSLRCG 516
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 198/384 (51%), Gaps = 13/384 (3%)
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+FG+ +G N +S + + A VF + E R V SWN ++GG
Sbjct: 126 TFGLRLG--------NAMLSMLVRFGETWHAWKVFAKMPE--RDVFSWNVMVGGYGKAGF 175
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+++L+ Y M++ G RPDV T +L SC L GR VH+H + +G ++V V+N
Sbjct: 176 LEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNA 235
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L++MY+KCGD+++AR +FDGM +SW AMI+G+ + + + L LF M P+
Sbjct: 236 LVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPN 295
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
L+T+ S+ G L+ K A G +V CN+LI MYS G +G+A +F
Sbjct: 296 LMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFS 355
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ + +SWT MI+G NG +AL+++ M ++ P+ VT + L AC G L+
Sbjct: 356 RMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDV 415
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA- 537
G L T + + + + ++ + +++A++ + MP K D W +++
Sbjct: 416 GIKLHELATSKGFIR-YIVVANALVEMYAKSKIIEKAIEVFKYMPDK-DVISWSSMIAGF 473
Query: 538 CKIHRNIEIGEYVAYRLFELEPHS 561
C H+N E Y + L +++P+S
Sbjct: 474 CFNHKNFEALYYFRHMLADVKPNS 497
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 300/590 (50%), Gaps = 39/590 (6%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD--RLDCAYKLFDKMPD 117
+ +AC ++ + IH ++ + SD F + +V A + LD K+ + +
Sbjct: 60 LLEACTSMAKM---KEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKS 176
+ SWN I G+ + + L+ NM G D T L +
Sbjct: 117 LNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANE 176
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+ I +G D+D+ V N I C +L A +F E +R +VSWNSII G
Sbjct: 177 ILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFD--ESCVRDLVSWNSIINGYVRC 234
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D++ + Y M PD T++ ++S+ E L GR +H G +L V +
Sbjct: 235 GLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLA 294
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD--------------- 341
N L+ MY KC +I++A+ LF+ M +T VSWT M+ GYA+ G L+
Sbjct: 295 NALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVV 354
Query: 342 ----------------EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
EAL LF M+A+ PD +TV++ +S C Q GAL++G W +Y
Sbjct: 355 LWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYV 414
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
L NV + AL+DMY+KCG+I A ++F +P + ++WT +I G AL+G+ A+
Sbjct: 415 DKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAI 474
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
F +M+ + L P+ +TF+ VL AC H G +++G YF MT Y ++P+L HYSC+ DL
Sbjct: 475 SYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDL 534
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPY 565
LGR G L+EA + ++SMP + DA +WG L +IH N+ +GE A +L EL+PH Y
Sbjct: 535 LGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIY 594
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +AN+Y W+ +R MM+ V+K PG S + +NG F + D
Sbjct: 595 VLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRD 644
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 229/466 (49%), Gaps = 32/466 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN IR V+ A+LL+R M +K P+N T+P + K CA S + I GH+
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++ F SD+FV ++ + C L A KLFD+ RD+ SWN++I G+ + G ++
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L+Y M + + D VT++G+ A+ ++L+L + +H +G++ V + N + Y
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMY 301
Query: 201 AKCNDLKMAELVFRG---------------------IEEGLRT--------VVSWNSIIG 231
KC +++ A+++F +E +R VV WN++IG
Sbjct: 302 IKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIG 361
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + ++L + M PD TVV+ LS+C AL G +H + + +
Sbjct: 362 GFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM 421
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+V++ L+ MY+KCG+I A +F+ M R ++WTA+I G A G A+ F M
Sbjct: 422 NVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMI 481
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G VPD +T + ++S C G ++ G+ +F G+ + + L+D+ + G +
Sbjct: 482 SIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFL 541
Query: 411 GDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+A EL ++P E V W + G ++G +++ELD
Sbjct: 542 EEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELD 587
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 303/579 (52%), Gaps = 39/579 (6%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ +QMI ++ PF S + + ++ LD + K+ + + ++ SWN I GF
Sbjct: 72 IQAQMIINGLILDPFASSRLIAFCAL---SESRYLDYSVKILKGIENPNIFSWNVTIRGF 128
Query: 131 AQMGFLEKVLCLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
++ ++ L+ M G + D T L + + SL + + + ++
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
V N I +A C D++ A VF E +R +VSWN +I G + + ++ Y+
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFD--ESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M +G +PD T++ L+SSC L +G+ + + G + + ++N L+ M+SKCG
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-------------------------- 341
DI AR +FD + RT VSWT MISGYA+ G LD
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 342 -----EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+AL LF M+ + PD +T++ +S C Q GAL++G W Y L NV +
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVAL 426
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
+L+DMY+KCG+I +A +F+ + + +++T +I G AL+G+ A+ F++M++ +
Sbjct: 427 GTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGI 486
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
P+ +TF+ +L AC H G ++ G YF+ M + +NP+L HYS M DLLGR G L+EA
Sbjct: 487 APDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEAD 546
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
++SMP+++DA +WG LL C++H N+E+GE A +L EL+P + YV + +Y
Sbjct: 547 RLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEAN 606
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W+ R MM V+K PG S + +NG C F V D
Sbjct: 607 MWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRD 645
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 225/474 (47%), Gaps = 38/474 (8%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKN---DIEPNNLTFPFIAKACAKLSDFLYSQ 74
I WN IR + ++ LL+++M ++ + P++ T+P + K CA L
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
MI GH++K V + M+A C ++ A K+FD+ P RD+ SWN +I G+ ++G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
EK + ++ M G++ D VT++GL + L+ K + + G+ + + N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVS----------------------------- 225
+ ++KC D+ A +F +E+ RT+VS
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEK--RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 226 --WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
WN++IGG + D+L ++ M +PD T++ LS+C AL G +H +
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
Y L+V++ +L+ MY+KCG+I A +F G+ R +++TA+I G A GD A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALID 402
+ F M AG PD +T + ++S C G ++ G+ +F L + + ++D
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 403 MYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ + G + +A L ++P E W ++ GC ++G +++ELD
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 162/367 (44%), Gaps = 40/367 (10%)
Query: 12 KIYRSSTIN---QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
K++ S + WN I EA KA+ +++ M+ ++P+++T + +C+ L
Sbjct: 212 KVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLG 271
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
D + + ++ ++ I + ++DM++KC + A ++FD + R + SW MI
Sbjct: 272 DLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMIS 331
Query: 129 GFAQMGFL-------------------------------EKVLCLFYNMRLVGIQADFVT 157
G+A+ G L + L LF M+ + D +T
Sbjct: 332 GYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ A L + +H + + +V++ + + YAKC ++ A VF GI+
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
R +++ +IIGG +++++ MI G PD T + LLS+C C ++Q
Sbjct: 452 T--RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC-CHGGMIQT 508
Query: 278 RLVHSHGIHYGFDLDVSV--INTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGY 334
+ + F+L+ + + ++ + + G ++ A L + M + W A++ G
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
Query: 335 AQKGDLD 341
G+++
Sbjct: 569 RMHGNVE 575
>gi|242066372|ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
gi|241934306|gb|EES07451.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
Length = 706
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 190/560 (33%), Positives = 293/560 (52%), Gaps = 34/560 (6%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+ PN T + +AC D +M+HG++V F D FV ++V+MYAK + A
Sbjct: 132 VRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKAGDVVSAR 191
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
+L +P RDV SW A+I G G LE+ L +F M G+ + VT++ + QA
Sbjct: 192 RLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLSVIQACSLMG 251
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L VH+ + + ++ D SV N+ I YAK ++ A +FRG V S +
Sbjct: 252 ASELFSPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIWLFRGFYLKSGNVCSNEDV 311
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
+ YG C ++ G VH+H I G
Sbjct: 312 LAAVLYG-------------------------------CTISGSVKNGVGVHAHTIKIGA 340
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+S+ N+L+ MY++ ID+A F+F+GM + VSW +IS A+ ++EA+ LF
Sbjct: 341 FPSISIENSLMGMYARFEQIDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAMELFSV 400
Query: 350 MEAA--GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
+ AA G PD VTVLS++ C +G L G+ Y G +V +CNALI MY+K
Sbjct: 401 LHAAAGGLAPDFVTVLSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNALITMYAKL 460
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR-PNRVTFLAV 466
G I A +F + K +VSW +MI ++G+ AL +FHQ+ + PN +TF++V
Sbjct: 461 GRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDGHLALRVFHQLKDAGTPVPNAITFVSV 520
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
+ AC+H+G + +G+ F M + + + P ++HY+C+ DLLGR G+ EA +F++ MP+
Sbjct: 521 ISACSHSGLISEGYKCFESMGRDHSIEPSMDHYACVVDLLGRSGRFAEAEEFIRDMPVHP 580
Query: 527 DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRT 586
++ IWG LL AC++H N+++ E A L LEP S V ++N YA GRW A +RT
Sbjct: 581 NSSIWGPLLAACQLHGNVDLAEKAAKELSALEPESDIWRVSLSNTYASAGRWRDAAKIRT 640
Query: 587 MMKRNQVKKFPGQSLVHING 606
M+R ++K G S V + G
Sbjct: 641 EMRRVGLRKETGWSFVDVGG 660
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 137/271 (50%), Gaps = 23/271 (8%)
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-- 350
++ N+L+ Y +CG + A L DG R ++ ++IS + + G +ALR F M
Sbjct: 65 LAATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLISAHCRLGAPLDALRAFLDMLD 124
Query: 351 ---EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
A P+ T +++ CG + LG+ Y +GG + V +L++MY+K
Sbjct: 125 WGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKA 184
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + AR L LP + VVSWT +I+GC LNG E L++F M+E + PN VT L+V+
Sbjct: 185 GDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLSVI 244
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQ--VNPELNHYSCMADLL----GRKGKLKEAL----- 516
QAC+ G E L + V+ V EL H + + + L + G ++EA+
Sbjct: 245 QACSLMGASE-------LFSPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIWLFRG 297
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+++S + S+ + +L C I +++ G
Sbjct: 298 FYLKSGNVCSNEDVLAAVLYGCTISGSVKNG 328
>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 706
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 319/598 (53%), Gaps = 24/598 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ +R E+ + LL++++M + P+ T+PF+ ++C+ S+ + + IHG++V
Sbjct: 93 FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152
Query: 82 KSPFWSDIF--VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K F D+F V T + +MY +C + A++LFDK +D+ +++ Q E +
Sbjct: 153 KLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGI 210
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+F M + D T L + + L K VH I + D+ V +S
Sbjct: 211 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y+K L A +F + E R V WN +I K + L ++ M G R D+
Sbjct: 271 YSKLRSLVDARKLFDKMPEKDRVV--WNIMIAAYAREGKPTECLELFKSMARSGIRSDLF 328
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T + ++SS + + G+ H+H + G D VSV N+LI MY +C +DSA +F+ M
Sbjct: 329 TALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWM 388
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
D++ ++ AL LF M++ G D V +++++ GALE K
Sbjct: 389 TDKSSLT----------------ALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVK 432
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY--ALPEKTVVSWTTMIAGCAL 437
+ Y+ GL + AL+ Y+KCGSI A+ LF + +K ++ W +MI+ A
Sbjct: 433 YLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHAN 492
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G++ + L+++M + +P++VTFL +L AC ++G +EKG +F MT+ Y P
Sbjct: 493 HGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQE 552
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+CM +LLGR G + EA + V++MPIK DA +WG LL ACK+H ++ E+ A +L +
Sbjct: 553 HYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINM 612
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP +A Y+ ++NIYA G+WDGVA +R+ ++ +KK PG S + ING F V D
Sbjct: 613 EPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVAD 670
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 196/452 (43%), Gaps = 36/452 (7%)
Query: 39 LLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS--------QMIHGHIVKSPFWSDIF 90
+L R K P L FP L+S Q IH + F +
Sbjct: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+ + ++D YA L+ + ++F + D ++ +NA++ + G E+ L ++ M
Sbjct: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ D T + ++ ++ +++H + + +G D V Y +C + + A
Sbjct: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
Query: 211 LVF--RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR---HMIYDGFRPDVTTVVSLL 265
+F R +++ + W S + T G + D+ +R MI + PD T +LL
Sbjct: 181 QLFDKRSVKD-----LGWPSSL--TTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLL 233
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
++ ++VH I D+ V ++S+YSK + AR LFD M ++ RV
Sbjct: 234 RFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRV 293
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
W MI+ YA++G E L LF +M +G DL T L +IS Q ++ GK +
Sbjct: 294 VWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHI 353
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
G V V N+LIDMY +C + A ++F + +K+ ++ AL
Sbjct: 354 LRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSSLT----------------AL 397
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
LF +M ++ + V + +L A H G LE
Sbjct: 398 SLFSKMKSDGIQADFVIMINILPAFVHIGALE 429
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 115/280 (41%), Gaps = 5/280 (1%)
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ T+ L S C + L Q +H+ I +GF + ++ + LI Y+ G ++ + +F
Sbjct: 27 LNTLSLLFSRCNSIQHLQQ---IHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFC 83
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ D + A++ + G+ + L ++ M A PD T ++ C +
Sbjct: 84 SVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGF 143
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ Y G +V AL +MY +C +A +LF K + +++
Sbjct: 144 GRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQ 203
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
N +F +M+ L P+ TF +L+ ++ + + V +++ +L
Sbjct: 204 NDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLA-KIVHCIAIVSKLSGDLL 262
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + L + L +A MP K D +W ++ A
Sbjct: 263 VNTAVLSLYSKLRSLVDARKLFDKMPEK-DRVVWNIMIAA 301
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 325/632 (51%), Gaps = 38/632 (6%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
SS+ N + S ++ + +A L + K +P + A KL + Y+
Sbjct: 2 SSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHH 61
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+ HI + ++F T++ +Y+K L ++F+ MP RD SWN I G+A G
Sbjct: 62 VFDHIPQP----NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGS 117
Query: 136 LEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV-- 192
+ ++ M + + + +T + + + L + ++ + G +DV V
Sbjct: 118 CSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGS 177
Query: 193 -----------------------------CNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
CNT I+ +C ++ ++ +F G++E R
Sbjct: 178 PLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKE--RDS 235
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
+SW +I G ++L+ +R M GF D T S+L++C AL +G+ +H++
Sbjct: 236 ISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAY 295
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
I +V V + L+ MYSKC I SA +F M + +SWTAM+ GY Q G +EA
Sbjct: 296 VIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEA 355
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+++FF M+ G PD T+ S+IS C +LE G F A GL + V NALI +
Sbjct: 356 VKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITL 415
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y KCGS ++ LF + + VSWT ++AG A G+ E + LF +M+ L+P+ VTF
Sbjct: 416 YGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTF 475
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
+ VL AC+ AG +EKG YF M K + + P ++H +C+ DLLGR G+L+EA +F+ +MP
Sbjct: 476 IGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMP 535
Query: 524 IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVAN 583
D W TLL +C++H ++EIG++ A L LEP + A YV ++++YA G+WD VA
Sbjct: 536 CHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQ 595
Query: 584 LRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
LR M+ +V+K PG S + GK F+ +D
Sbjct: 596 LRRGMRDKRVRKEPGYSWIKYKGKVHVFSADD 627
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 188/585 (32%), Positives = 296/585 (50%), Gaps = 34/585 (5%)
Query: 63 ACAKLSDFLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
A + + + + +H I++S S + ++ A LD A +F+ +P +
Sbjct: 29 ALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETH 88
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
N + ++ EK L ++ MR G+ D + L +A K L +H
Sbjct: 89 LCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLA 148
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+G D+D V + YA C + A L+F + R VV+W+ +I G F+D
Sbjct: 149 AKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFH--RDVVTWSIMIDGYCQSGLFND 206
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+L + M PD + ++LS+C L G+++H + +D + + L++
Sbjct: 207 ALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVT 266
Query: 302 MYSKCGDID-------------------------------SARFLFDGMCDRTRVSWTAM 330
MY+ CG +D +AR +F+ M + V W+AM
Sbjct: 267 MYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAM 326
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
ISGYA+ EAL LF M++ G PD VT+LS+I+ C GAL+ KW + G
Sbjct: 327 ISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGF 386
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ + NALI+MY+KCGS+ AR +F +P K V+SWT MI+ A++G+ AL FHQ
Sbjct: 387 GGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQ 446
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
M + ++ PN +TF+ VL AC+HAG +E+G F M + + P+ HY CM DL GR
Sbjct: 447 MEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRAN 506
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMAN 570
L+EAL+ V++MP+ + IWG+L+ AC++H IE+GE+ A RL EL+P +V ++N
Sbjct: 507 LLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSN 566
Query: 571 IYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
IYA RW+ V +R +MK + K G S +N + F V D
Sbjct: 567 IYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVAD 611
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 224/464 (48%), Gaps = 31/464 (6%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N +RE E K LL++ RM+ + + +FP + KA +++ + IHG K
Sbjct: 91 NRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAK 150
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
F SD FVQT +V MYA C R+ A +FDKM RDV +W+ MI G+ Q G L L
Sbjct: 151 LGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F M+ ++ D + + + A A +LS K +H F + + D + + ++ YA
Sbjct: 211 FEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYAS 270
Query: 203 CNDLKMAELVFR--------------------GIEEGLRTV---------VSWNSIIGGC 233
C + +A +F G E R+V V W+++I G
Sbjct: 271 CGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGY 330
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
D ++LN + M G +PD T++S++++C AL Q + +H GF +
Sbjct: 331 AESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGAL 390
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ N LI MY+KCG ++ AR +FD M + +SWT MIS +A GD ALR F ME
Sbjct: 391 PINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDE 450
Query: 354 GEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
P+ +T + ++ C +G +E G K F + + + ++D++ + + +
Sbjct: 451 NIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLRE 510
Query: 413 ARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
A EL A+P V+ W +++A C ++GE +++ELD
Sbjct: 511 ALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELD 554
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I + + +AL LF M+ I+P+ +T + ACA L ++ IH +
Sbjct: 323 WSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVD 382
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F + + +++MYAKC L+ A ++FDKMP ++V SW MI FA G L
Sbjct: 383 KNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALR 442
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
F+ M I+ + +T +G+ A HA
Sbjct: 443 FFHQMEDENIEPNGITFVGVLYACSHA 469
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 295/550 (53%), Gaps = 3/550 (0%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
I + C + D +IH HI+++ F S++ + T ++ Y K A K+FD+MP+R+
Sbjct: 43 ILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERN 102
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V SW A I G+A+ G + L +F M G++A+ T + +A + L +H
Sbjct: 103 VVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG 162
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
++ V + + ++KC +++ A +F + E R VVSWN++IGG D
Sbjct: 163 CIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSE--RDVVSWNAVIGGYAAQDFN 220
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
DDS + M+ +G PD T+ S+L + L++ +H I GF + + +L
Sbjct: 221 DDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSL 280
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPD 358
I Y+K + SA L+ M + +S+TA+++GYA+K EAL LF M+ D
Sbjct: 281 IDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEID 340
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT +M++ C +L +G+ A +V NAL+DMY+K G I DA FY
Sbjct: 341 DVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFY 400
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ EK V+SWT++I G +G EA+ L+ +M L+PN +TFL++L AC+H+G +
Sbjct: 401 EMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGE 460
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
GW FN M Y + P HYSCM DL R G+L+EA + + M IK ++ +WG +L AC
Sbjct: 461 GWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGAC 520
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
I+ ++ +GE A L ++P ++A YV +A IYA G WD +R +M+ +KK PG
Sbjct: 521 SIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKKIPG 580
Query: 599 QSLVHINGKT 608
S++ K
Sbjct: 581 YSIIQSTNKN 590
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 219/425 (51%), Gaps = 11/425 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W +QI ALL+F +M + + N T+ + +AC L IHG I
Sbjct: 106 WTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQ 165
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F ++FVQ+ +VD+++KC ++ A LF+ M +RDV SWNA+I G+A F +
Sbjct: 166 KNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFR 225
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+FY+M G+ D T+ + +A+ A +L + +H I +G + + + + I AYA
Sbjct: 226 MFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYA 285
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGG----CTYGDKFDDSLNFYRHMIYDGFRPD 257
K +K A +++ + + + V+S+ +I+ G C+Y ++L+ ++ M + D
Sbjct: 286 KSEGMKSASALYKSMLK--KDVISFTAIMTGYARKCSYS---REALDLFKDMQHIFMEID 340
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L+ C +L GR +H+ I Y DV+ N L+ MY+K G+I+ A F
Sbjct: 341 DVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFY 400
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M ++ +SWT++I+GY + G EA+ L+ ME G P+ +T LS++ C SG
Sbjct: 401 EMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGE 460
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
G + F+N + + +ID++++ G + +A + + K S W ++ C
Sbjct: 461 GWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGAC 520
Query: 436 ALNGE 440
++ G
Sbjct: 521 SIYGH 525
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 181/384 (47%), Gaps = 5/384 (1%)
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
M + Q I + L +HS I G D+++ + I Y K + A VF + E
Sbjct: 41 MKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPE 100
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R VVSW + I G + D+L + M G R + T S+L +C L +G
Sbjct: 101 --RNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGM 158
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H F ++ V + L+ ++SKCG+++ AR+LF+ M +R VSW A+I GYA +
Sbjct: 159 QIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQD 218
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
D++ R+F++M G PD T+ S++ ++ L G ++ +
Sbjct: 219 FNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNG 278
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV-EALDLFHQMMELDLR 457
+LID Y+K + A L+ ++ +K V+S+T ++ G A + EALDLF M + +
Sbjct: 279 SLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFME 338
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
+ VTF +L C L G L K Y+ + ++ + + D+ + G++++A
Sbjct: 339 IDDVTFCTMLNVCADIASLSIGRQIHALAIK-YKPSYDVATGNALVDMYAKSGEIEDATR 397
Query: 518 FVQSMPIKSDAGIWGTLLCACKIH 541
M K+ W +L+ H
Sbjct: 398 AFYEMKEKNVIS-WTSLITGYGKH 420
>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
Length = 916
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 321/603 (53%), Gaps = 10/603 (1%)
Query: 6 LPPRLNKIYRSST---INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
P +++ S++ + WN+ I+ V+ + ++A+ +F+ M+ + +P+ T I
Sbjct: 317 FPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIIS 375
Query: 63 ACAKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
AC + +HG+I+K + + V +++D+Y KC+ A LF MP RD+
Sbjct: 376 ACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLI 435
Query: 122 SWNAMIVGFAQMGFL-EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SWN MI G+++ L E+ +F + G+ TV+ + + + L+ KSVHSF
Sbjct: 436 SWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSF 495
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ G VS N+ I Y C D A + I + ++SWN+ I GC +
Sbjct: 496 ILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITP-MSDIISWNTAIVGCVQNGLYG 554
Query: 241 DSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D+L ++ M PD T+VS+LS C + G+ +H + + ++ V N L
Sbjct: 555 DALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNAL 614
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
++MY + GD +SA +F + R SW MISG+AQ + AL+ + ME P+
Sbjct: 615 LTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKMEYFE--PNE 672
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
++++ +I C Q G L GK + GL+ NV + +L+DMYSKCG + + +F +
Sbjct: 673 ISIVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFES 732
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EK++ W +MI+ +G ++++++F +M ++ R TF+A+L AC+H+G ++G
Sbjct: 733 SAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEG 792
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
Y++LM + + + P H+ C+ D+LGR G+L+EA FV+S+P K G+WG LL AC
Sbjct: 793 LKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACS 852
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
+++ E VA L LEP ++ YV M+N+YA W G +R +++ + K G+
Sbjct: 853 KKSELKMCESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGR 912
Query: 600 SLV 602
S++
Sbjct: 913 SII 915
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 224/455 (49%), Gaps = 9/455 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I A++LFR M ++ + + ++ + HG +
Sbjct: 132 WNAAISALTLNCRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMAL 191
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K +D+ + T++DMYAKC + +F +MP RD SWN+M+ G G E
Sbjct: 192 KRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAY 251
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGV-DADVSVCNTWISA 199
F M QAD V++ + A H K L S +SVHS I +G D SV N+ I+
Sbjct: 252 YFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITF 311
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y + + AE VF + + +V+WN++I G D+ ++++ ++ M +PDV
Sbjct: 312 YYELGFPEAAEEVF--LSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVA 368
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDG 318
T+V+++S+C L +G+ VH + I G + SV N+L+ +Y KC D +AR LF
Sbjct: 369 TLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRT 428
Query: 319 MCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M R +SW MISGY++ L +EA +F + + G L TV+++I C L
Sbjct: 429 MPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNF 488
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCA 436
GK ++ G V N+LI MY CG A L ++ P ++SW T I GC
Sbjct: 489 GKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCV 548
Query: 437 LNGEFVEALDLFHQMME-LDLRPNRVTFLAVLQAC 470
NG + +AL+ F M L L P+ +T ++VL C
Sbjct: 549 QNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVC 583
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 226/478 (47%), Gaps = 30/478 (6%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H +KS D V+T+++ Y++ + A ++FD+ D+ WNA I
Sbjct: 85 LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ LF M V D +++ + A A+ L + H + +D D+S+ NT
Sbjct: 145 YGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNT 204
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC D +E+VF+ + R SWNS++ G + + S +++ M+ F+
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMP--YRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262
Query: 256 PDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSAR 313
D ++ +LS+C + L G VHS I G+ D SV N+LI+ Y + G ++A
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAE 322
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F ++ V+W AMI G + ++EA+ +F M + + PD+ T++++IS CG G
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQ-PDVATLVTIISACGDRG 381
Query: 374 ALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L GK Y G + + V N+L+D+Y KC AR LF +P + ++SW TMI
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441
Query: 433 AGCALNGEF-VEALDLFHQMMELDLRPNRVTFLAVLQAC-----------THAGFLEKGW 480
+G + N EA +F ++ L T +AV+ +C H+ L+ G+
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGF 501
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+T V N ++ Y C D L A ++S+ SD W T + C
Sbjct: 502 -----LTGVSAANSLIHMYICCGDSLA-------AFSLLESITPMSDIISWNTAIVGC 547
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 314/575 (54%), Gaps = 19/575 (3%)
Query: 52 PNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDR-LDCA 108
PN+ + + +AC+ SDF+ ++ G ++K+ F SD+ V +++DM+ K + + A
Sbjct: 164 PNDYCYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
YK+FDKM + +V +W MI QMGF + + F +M L G ++D T+ + A
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN---DLKMAELVFRGIEEGLRTVVS 225
++LSL K +HS+ I G+ DV + + YAKC+ + VF +E+ +V+S
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED--HSVMS 338
Query: 226 WNSIIGG----CTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLV 280
W ++I G C +++N + MI G P+ T S +C G+ V
Sbjct: 339 WTALITGYMKNCNLAT---EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
G + SV N++ISM+ K ++ A+ F+ + ++ VS+ + G + +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
++A +L + T S++SG G++ G+ + GL N VCNAL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
I MYSKCGSI A +F + + V+SWT+MI G A +G + L+ F+QM+E ++PN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VT++A+L AC+H G + +GW +FN M + +++ P++ HY+CM DLL R G L +A +F+
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
+MP ++D +W T L AC++H N E+G+ A ++ EL+P+ A Y++++NIYA G+W+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R MK + K G S + + K F V D
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGD 730
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 235/499 (47%), Gaps = 18/499 (3%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKACAKLSDFLYSQ 74
S+ IN + I ++ + A+ M ++ I P +++TF + K+C + DF +
Sbjct: 23 SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGK 82
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP---DRDVASWNAMIVGFA 131
++H +++ D + +++ +Y+K A +F+ M RDV SW+AM+ +
Sbjct: 83 LVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYG 142
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADV 190
G + +F +G+ + + +A ++ + + + F + G ++DV
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 191 SVCNTWISAYAKC-NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + I + K N + A VF + E VV+W +I C +++ F+ M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--- 306
+ GF D T+ S+ S+C E L G+ +HS I G DV +L+ MY+KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSAD 318
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEV-PDLVTVLS 364
G +D R +FD M D + +SWTA+I+GY + +L EA+ LF M G V P+ T S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
CG +GK A GL N V N++I M+ K + DA+ F +L EK
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+VS+ T + G N F +A L ++ E +L + TF ++L + G + KG
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE---Q 495
Query: 485 LMTKVYQVNPELNHYSCMA 503
+ ++V ++ N C A
Sbjct: 496 IHSQVVKLGLSCNQPVCNA 514
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A L + + ++ + TF + A + + IH +VK + V +
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+ MY+KC +D A ++F+ M +R+V SW +MI GFA+ GF +VL F M G++ +
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 156 VTVMGLTQAAIH 167
VT + + A H
Sbjct: 576 VTYVAILSACSH 587
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/457 (39%), Positives = 264/457 (57%), Gaps = 5/457 (1%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L + H L+ K +H+ ++ D+ + NT ++ YAKC DL A +F E
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFD--EMSS 78
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL--SSCVCPEALVQGR 278
R VV+W ++I G + D+ D+L M+ G +P+ T+ SLL +S V ++QGR
Sbjct: 79 RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H + YG+D +V V ++ MY++C ++ A+ +FD M + VSW A+I+GYA+KG
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
D+A LF M P T S++ C G+LE GKW G K V N
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
L+DMY+K GSI DA+++F L ++ VVSW +M+ G + +G AL F +M+ + P
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP 318
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N +TFL VL AC+HAG L++G YF++M K Y V P+++HY M DLLGR G L A+ F
Sbjct: 319 NDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQF 377
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+ MPIK A +WG LL AC++H+N+E+G Y A +FEL+ H +V + NIYAL GRW
Sbjct: 378 ISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRW 437
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ A +R MMK + VKK P S V + + F +D
Sbjct: 438 NDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADD 474
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 206/401 (51%), Gaps = 6/401 (1%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
L R+ KN+ + + K C L+ ++IH ++ S F D+ +Q T++++YA
Sbjct: 3 LIRQQCKNNAGAREICHTLL-KRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYA 61
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
KC L A KLFD+M RDV +W A+I G++Q + L L M +G++ + T+
Sbjct: 62 KCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLAS 121
Query: 161 LTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
L +AA +L + +H + G D++V V + YA+C+ L+ A+L+F +
Sbjct: 122 LLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS 181
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
+ VSWN++I G + D + + +M+ + +P T S+L +C +L QG+
Sbjct: 182 --KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGK 239
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH+ I +G L V NTL+ MY+K G I+ A+ +FD + R VSW +M++GY+Q G
Sbjct: 240 WVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHG 299
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
AL+ F M P+ +T L +++ C +G L+ G+ + + ++ +
Sbjct: 300 LGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYV 359
Query: 399 ALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALN 438
++D+ + G + A + +P K T W ++ C ++
Sbjct: 360 TMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 156/307 (50%), Gaps = 13/307 (4%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+LL C L +G+++H+ ++ F D+ + NTL+++Y+KCGD+ AR LFD M R
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI---SGCGQSGALELGK 379
V+WTA+I+GY+Q +AL L M G P+ T+ S++ SG G + L+ G+
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ-GR 138
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G NV V A++DMY++C + +A+ +F + K VSW +IAG A G
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ +A LF M+ +++P T+ +VL AC G LE+G LM K +L +
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK---WGEKLVAF 255
Query: 500 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
+ + D+ + G +++A + K D W ++L H +G+ R E+
Sbjct: 256 VGNTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQH---GLGKVALQRFEEM 311
Query: 558 EPHSAAP 564
AP
Sbjct: 312 LRTRIAP 318
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 5/321 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL--SDFLYS 73
S + W + I + ALLL M + ++PN T + KA + + +D L
Sbjct: 78 SRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +HG ++ + S+++V ++DMYA+C L+ A +FD M ++ SWNA+I G+A+
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G +K CLF NM ++ T + A L K VH+ I G V
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
NT + YAK ++ A+ VF + + R VVSWNS++ G + +L + M+
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAK--RDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTR 315
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA- 312
P+ T + +L++C L +GR Y + +S T++ + + G +D A
Sbjct: 316 IAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAI 375
Query: 313 RFLFDGMCDRTRVSWTAMISG 333
+F+ + T W A++
Sbjct: 376 QFISEMPIKPTAAVWGALLGA 396
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 269/441 (60%), Gaps = 3/441 (0%)
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+++H+ + D+ + N ++ YAKC L+ A+ +F + + +VSW +I G +
Sbjct: 125 RAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT--KDMVSWTVLISGYS 182
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+ ++L + M++ GF+P+ T+ SLL + + GR +H+ + YG+D++V
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V ++L+ MY++ + A+ +F+ + + VSW A+I+G+A+KG+ + +RLF M G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQG 302
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P T S+ + C SG+LE GKW + G + + N LIDMY+K GSI DA+
Sbjct: 303 FEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAK 362
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F L ++ +VSW ++I+G A +G EAL LF QM++ ++PN +TFL+VL AC+H+G
Sbjct: 363 KVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 422
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
L++G YF LM K +++ ++ H+ + DLLGR G+L EA F++ MPIK A +WG L
Sbjct: 423 LLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGAL 481
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L +C++H+N+++G Y A ++FEL+PH + P+V ++NIYA GR A +R MMK + VK
Sbjct: 482 LGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVK 541
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K P S V I + F D
Sbjct: 542 KEPACSWVEIENEVHVFVAND 562
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 206/407 (50%), Gaps = 3/407 (0%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+EP + + C L + IH HI S F D+ + +++MYAKC L+ A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LFDKMP +D+ SW +I G++Q G + L LF M +G Q + T+ L +A+
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ +H+F + G D +V V ++ + YA+ ++ A+++F + + VVSWN++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL--AAKNVVSWNAL 278
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G + + + + M+ GF P T S+ ++C +L QG+ VH+H I G
Sbjct: 279 IAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG 338
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ NTLI MY+K G I A+ +F + + VSW ++ISGYAQ G EAL+LF
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 398
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M A P+ +T LS+++ C SG L+ G+++ ++ V ++D+ + G
Sbjct: 399 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 458
Query: 410 IGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +A + +P K T W ++ C ++ + Q+ ELD
Sbjct: 459 LNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELD 505
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 151/289 (52%), Gaps = 4/289 (1%)
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P+ T +L+ C L QGR +H+H F+ D+ ++N +++MY+KCG ++ A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M + VSWT +ISGY+Q G EAL LF M G P+ T+ S++ G
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+ G+ ++ G NV V ++L+DMY++ + +A+ +F +L K VVSW +IA
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQV 492
G A GE + LF QM+ P T+ +V AC +G LE+G W + +++ Q
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQ- 339
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
P + + D+ + G +K+A + + +K D W +++ H
Sbjct: 340 -PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQH 386
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 147/321 (45%), Gaps = 3/321 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I +A +AL LF +M +PN T + KA + + +H +
Sbjct: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSL 233
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++ V ++++DMYA+ + A +F+ + ++V SWNA+I G A+ G E V+
Sbjct: 234 KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMR 293
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G + T + A + L K VH+ I G + NT I YA
Sbjct: 294 LFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYA 353
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K +K A+ VFR + + + +VSWNSII G ++L + M+ +P+ T
Sbjct: 354 KSGSIKDAKKVFRRLVK--QDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITF 411
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFLFDGMC 320
+S+L++C L +G+ + + V+ T++ + + G ++ A +F+ +
Sbjct: 412 LSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPI 471
Query: 321 DRTRVSWTAMISGYAQKGDLD 341
T W A++ ++D
Sbjct: 472 KPTAAVWGALLGSCRMHKNMD 492
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 5/227 (2%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ + WN+ I K E + LF +M + EP + T+ + ACA +
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKW 328
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H H++KS ++ T++DMYAK + A K+F ++ +D+ SWN++I G+AQ G
Sbjct: 329 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 388
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M +Q + +T + + A H+ L + ++A V+ T
Sbjct: 389 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVT 448
Query: 196 WISAYAKCNDLKMAELVFRGIEEG--LRTVVSWNSIIGGCTYGDKFD 240
+ + L A + IEE T W +++G C D
Sbjct: 449 VVDLLGRAGRLNEAN---KFIEEMPIKPTAAVWGALLGSCRMHKNMD 492
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 293/546 (53%), Gaps = 38/546 (6%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
L A ++F+ + + +N +I F + G K + LF +R G+ D T + +A
Sbjct: 82 LHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKA 141
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ + V+ F + G++ D VCN+ + YA+ ++ VF + + R VV
Sbjct: 142 IGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQ--RDVV 199
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
SWN +I G +++D+++ +R M RP+ TVVS LS+C+ + L G+ +H +
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY 259
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ + + N L+ MY KCG + AR +F+ M +T + WT+M+SGY G LDEA
Sbjct: 260 -VREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEA 318
Query: 344 -------------------------------LRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ LF M+ PD T++++++GC Q
Sbjct: 319 RELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQL 378
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G LE GKW Y + + +V ALI+MY+KCG I + E+F L EK SWT++I
Sbjct: 379 GTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSII 438
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
G A+NG+ +AL+LF +M++ ++P+ +TF+ VL AC+H G +E+G +F MT VYQ+
Sbjct: 439 CGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQI 498
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI---WGTLLCACKIHRNIEIGEY 549
P+L HY C+ DLLGR G+L EA + ++ P ++ I +G LL AC+ H N+E+GE
Sbjct: 499 EPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGER 558
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA RL +E ++ + +ANIYA RW+ V +R MK VKK PG S V +NG
Sbjct: 559 VAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVH 618
Query: 610 TFTVED 615
F V D
Sbjct: 619 EFLVGD 624
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 216/453 (47%), Gaps = 36/453 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N I+ KA+LLFR++++ + P+N T+PF+ KA L + + ++G +V
Sbjct: 100 YNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVV 159
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS D +V +++DMYA+ R+ ++F++MP RDV SWN +I G+ + E +
Sbjct: 160 KSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVD 219
Query: 142 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M+ ++ + TV+ A I K L L K +H + + + + + N + Y
Sbjct: 220 VFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY-VREQLGFTIKIGNALVDMY 278
Query: 201 AKCNDLKMAELVFRGI-----------------------------EEGLRTVVSWNSIIG 231
KC L +A +F + +R VV W ++I
Sbjct: 279 CKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMIN 338
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G ++FDD++ +R M PD T+V+LL+ C L QG+ +H + +
Sbjct: 339 GYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMI 398
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
D V LI MY+KCG I+ + +F+G+ ++ SWT++I G A G +AL LF M
Sbjct: 399 DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMV 458
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
G PD +T + ++S C G +E G K F + ++ + LID+ + G +
Sbjct: 459 QTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQL 518
Query: 411 GDARELFYALP----EKTVVSWTTMIAGCALNG 439
+A EL P E V + +++ C +G
Sbjct: 519 DEAEELIEKSPNVNNEVIVPLYGALLSACRTHG 551
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 153/345 (44%), Gaps = 20/345 (5%)
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS--KCGDIDSARFLFD 317
+ + LL +C + L Q + + + GF +N + + G++ A +F+
Sbjct: 34 SCIFLLKNCKSMQHLKQ---IQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFN 90
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + +I + + G +A+ LF + G PD T + G G +
Sbjct: 91 YIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVRE 150
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ + GL+ + VCN+L+DMY++ G + + R++F +P++ VVSW +I+G
Sbjct: 151 GEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVK 210
Query: 438 NGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ +A+D+F +M + LRPN T ++ L AC LE G + + Q+ +
Sbjct: 211 CRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVRE--QLGFTI 268
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC-ACKIHRNIEIGEY-VAYRL 554
+ + D+ + G L A + MPIK T++C + + G+ A L
Sbjct: 269 KIGNALVDMYCKCGHLSIAREIFNDMPIK-------TVICWTSMVSGYVNCGQLDEAREL 321
Query: 555 FELEP-HSAAPYVEMANIYALGGRW-DGVANLRTM-MKRNQVKKF 596
FE P + M N Y R+ D VA R M +KR +F
Sbjct: 322 FERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRF 366
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 216/640 (33%), Positives = 322/640 (50%), Gaps = 57/640 (8%)
Query: 7 PPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK 66
P + + + I +WN I + + AL LF M + +++++ + C
Sbjct: 37 PKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRR----SSISWNAMISGCLS 92
Query: 67 LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
F ++ + K P D+ M+ + L A LFD+MP+RDV SWNAM
Sbjct: 93 NDKFYLARQL---FEKMPT-RDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAM 148
Query: 127 IVGFAQMGFLEKVLCLFYNM-------------------------RLVGIQADFVTVMGL 161
+ G+AQ G++++ +F M RL +AD+ +
Sbjct: 149 LSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWN 208
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+ K L+ + F + D NT IS YA+ +L A+ +F E +R
Sbjct: 209 CMMGGYVKRNRLVDARGIFDRM--PERDEVSWNTMISGYAQNGELLEAQRLFE--ESPVR 264
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV--SLLSSCVCPEALVQGRL 279
V +W +++ G D++ ++DG P+ +V ++++ V + + Q R
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEA-----RRVFDGM-PEKNSVSWNAIIAGYVQCKRMDQARE 318
Query: 280 VHSHGIHYGFDL----DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
+ F+ +VS NT+I+ Y++ GDI AR FD M R +SW A+I+GYA
Sbjct: 319 L--------FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYA 370
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q G +EAL LF M+ GE + T S +S C + ALELGK GL+
Sbjct: 371 QSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCY 430
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V NAL+ MY KCG+I DA +F + EK VVSW TMIAG A +G EAL LF M +
Sbjct: 431 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG 490
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ P+ VT + VL AC+H G ++KG YF MT+ Y + HY+CM DLLGR G+L +A
Sbjct: 491 ILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDA 550
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
+ +++MP + DA WG LL A +IH N E+GE A +FE+EP ++ YV ++N+YA
Sbjct: 551 QNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAAS 610
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
GRW V +R M+ VKK PG S V + K TFTV D
Sbjct: 611 GRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGD 650
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 301/576 (52%), Gaps = 34/576 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY--KLFDKMPDRDVASWNAMIVGFA 131
+ IH I+K+ + F + +++ A D +Y LF + + + WN MI G +
Sbjct: 45 KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLS 104
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
L + +M G + + T + ++ + K VH+ + +G++ +
Sbjct: 105 SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAF 164
Query: 192 VCNTWISAYAKCNDLKMAELVF--------------------RGI---------EEGLRT 222
V + I+ YA+ +L A LVF +G E +R
Sbjct: 165 VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRD 224
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ-GRLVH 281
VVSWN++I G + ++++ F+ M P+V+T++S+LS+C + +Q G V
Sbjct: 225 VVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVR 284
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S G ++ ++N LI MY KCGD++ A LF+ + D+ VSW MI GY
Sbjct: 285 SWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYK 344
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG--GLKDNVMVCNA 399
EAL LF M + P+ VT LS++ C GAL+LGKW Y +K+ V + +
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTS 404
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY+KCG + A+ +F + K++ +W MI+G A++G AL LF +M P+
Sbjct: 405 LIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPD 464
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TF+ VL AC HAG L G YF+ M + Y+V+P+L HY CM DL GR G EA V
Sbjct: 465 DITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV 524
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
++M +K D IW +LL AC+IHR IE+ E VA LFELEP + + YV ++NIYA GRW+
Sbjct: 525 KNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWE 584
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA +RT + N++KK PG S + ++ F V D
Sbjct: 585 DVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGD 620
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 233/484 (48%), Gaps = 42/484 (8%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L K R+ WN IR AL + M + EPN TFP I K+C K+
Sbjct: 84 LFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRG 143
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR------------------------- 104
+ +H H++K + FV T++++MYA+
Sbjct: 144 AHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITG 203
Query: 105 ------LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
LD A +LFD++P RDV SWNAMI G+AQ G +E+ + F MR + + T+
Sbjct: 204 YASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTM 263
Query: 159 MG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ L+ A L L V S+ G+ +++ + N I Y KC DL+ A +F I+
Sbjct: 264 LSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ 323
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ + VVSWN +IGG T+ + ++L +R M+ P+ T +S+L +C AL G
Sbjct: 324 D--KNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLG 381
Query: 278 RLVHSH--GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
+ VH++ V++ +LI MY+KCGD+ A+ +FD M ++ +W AMISG+A
Sbjct: 382 KWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFA 441
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 394
G D AL LF M + G VPD +T + +++ C +G L LG ++F + + +
Sbjct: 442 MHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKL 501
Query: 395 MVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ID++ + G +A L + P+ + W +++ C ++ A + +
Sbjct: 502 PHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAI--WCSLLGACRIHRRIELAESVAKHL 559
Query: 452 MELD 455
EL+
Sbjct: 560 FELE 563
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 198/408 (48%), Gaps = 38/408 (9%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWIS--AYAKCNDLKMAELVFRGIEEGLRTVVSW 226
K L LK +HS I G+ + I A + DL A +F+ I + W
Sbjct: 39 KTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVI--W 96
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N +I G + + +L +Y HMI G P+ T S+ SC +G+ VH+H +
Sbjct: 97 NHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLK 156
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
G + + V +LI+MY++ G++ +AR +FD R VS+TA+I+GYA KG LDEA L
Sbjct: 157 LGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEAREL 216
Query: 347 -------------------------------FFAMEAAGEVPDLVTVLSMISGCGQSG-A 374
F M A P++ T+LS++S C QSG +
Sbjct: 217 FDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSS 276
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LG W ++ GL N+ + N LIDMY KCG + +A LF + +K VVSW MI G
Sbjct: 277 LQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGG 336
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVN 493
+ EAL LF +MM+ ++ PN VTFL++L AC + G L+ G W + + + +
Sbjct: 337 YTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMK 396
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ ++ + D+ + G L A M KS A W ++ +H
Sbjct: 397 NTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLA-TWNAMISGFAMH 443
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 6/250 (2%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN I + +AL LFRRM +++I+PN++TF I ACA L + +H ++
Sbjct: 329 SWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYV 388
Query: 81 VKS--PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
K+ + + + T+++DMYAKC L A ++FD M + +A+WNAMI GFA G +
Sbjct: 389 DKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDT 448
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDADVSVCNTWI 197
L LF M G D +T +G+ A HA LSL + S I V + I
Sbjct: 449 ALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMI 508
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ + AE + + +E + W S++G C + + + + +H+ P+
Sbjct: 509 DLFGRAGLFDEAETLVKNMEMKPDGAI-WCSLLGACRIHRRIELAESVAKHLFE--LEPE 565
Query: 258 VTTVVSLLSS 267
+ LLS+
Sbjct: 566 NPSAYVLLSN 575
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 302/551 (54%), Gaps = 10/551 (1%)
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
K +DF + + +H I+K +D++V ++ ++ C +++ A +F+++ D +V +N
Sbjct: 32 KCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNT 91
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
+I Q K F++M+ G+ AD T L +A L ++ +H G
Sbjct: 92 LIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYG 151
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D+ V N+ I +Y+KC L + + +E G + +VSWNS+IGG +
Sbjct: 152 FFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKL 211
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYS 304
+ M D + ++L V G + + + + +V +T++S Y
Sbjct: 212 FDEMA----ERDAVSWNTILDGYV-----KAGEMSQAFNLFEKMPERNVVSWSTMVSGYC 262
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
K GD++ AR LFD M + V+WT +ISG+A+KG EA L+ MEAAG PD T++S
Sbjct: 263 KTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLIS 322
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+++ C +SG L LGK +K +V V NAL+DMY+KCG + A +F + +
Sbjct: 323 ILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRD 382
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+VSW M+ G A++G +A+ LF +M + +P++VT +A+L ACTHAGF+++G YFN
Sbjct: 383 LVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFN 442
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
M + + + P + HY CM DLLGR G+L+EA VQSMP++ + IWGTLL AC++H +
Sbjct: 443 SMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAV 502
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
+ E V RL LE Y ++NI+A G W+ VAN+R MK V+K G S + +
Sbjct: 503 PLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIEL 562
Query: 605 NGKTCTFTVED 615
+ + FTV D
Sbjct: 563 DDEVHEFTVFD 573
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 229/446 (51%), Gaps = 16/446 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ ++ +N+ IR V +++ KA F M+KN + +N T+PF+ KAC Q
Sbjct: 82 QDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQ 141
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY--KLFDKMPDRDVASWNAMIVGFAQ 132
MIH H+ K F+ D+FV +++D Y+KC L Y KLF +M ++D+ SWN+MI G +
Sbjct: 142 MIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVK 201
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVS 191
G L + LF M + D V+ + + A +S +F + + + +V
Sbjct: 202 AGDLGRARKLFDEM----AERDAVSWNTILDGYVKAGEMS-----QAFNLFEKMPERNVV 252
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+T +S Y K D++MA ++F + + +V+W II G ++ Y M
Sbjct: 253 SWSTMVSGYCKTGDMEMARMLFDKMP--FKNLVTWTIIISGFAEKGLAKEATTLYNQMEA 310
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G +PD T++S+L++C LV G+ VH+ V+V N L+ MY+KCG +D
Sbjct: 311 AGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDK 370
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F+ M R VSW M+ G A G ++A++LF M+ G PD VT+++++ C
Sbjct: 371 ALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTH 430
Query: 372 SGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWT 429
+G ++ G +F++ G+ ++ +ID+ + G + +A L ++P E V W
Sbjct: 431 AGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWG 490
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD 455
T++ C ++ A + +++ L+
Sbjct: 491 TLLGACRVHNAVPLAEKVLDRLITLE 516
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/611 (31%), Positives = 314/611 (51%), Gaps = 11/611 (1%)
Query: 7 PPRLNK----IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
PP L + + S T N+ +R + + A+LL R++ + + TF + +
Sbjct: 49 PPGLARDLFDEFPSPTPRLANALLRAHIRARQWRAAILLGPRLR---VRLDGFTFSLLLR 105
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
ACA L + + +H ++S S D FV T +V MYA+C + A + + D+
Sbjct: 106 ACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIV 165
Query: 122 SWNAMIVGFAQMGFLEKVLCLF-YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
+++ G+ Q G E+ L F N+ G+ VT++ AA H+ ++ H++
Sbjct: 166 LRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAY 225
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ + D+++ NT +S Y K D + + +F G+ + R V++W+ +I G
Sbjct: 226 VVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTD--RDVITWSCMIKGYVQHGDAH 283
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+ L YR M+ +P+ T+VS+L +C +G+ VH + G +L+V V L+
Sbjct: 284 EGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATALV 343
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY KC + A LF M + V+W A+I G Q E+L +F M VPD +
Sbjct: 344 DMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAI 403
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++ +++ C + G L Y G +N V AL+D+YSKCG I A +F
Sbjct: 404 TMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEGT 463
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
EK +V W +MIAG +G EA+ L+ +M+ ++PN VTF++VL AC+H+G +++G
Sbjct: 464 TEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEGI 523
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
F+ MT+V+ V P H S M DLLGR G+L+EA+ F++ M ++ A W LL AC+
Sbjct: 524 QIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAACRE 583
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H N ++ + A L +L+P Y + NIYA +W+ V + R M++ ++K PG S
Sbjct: 584 HNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVKDTRDMVRGRDLRKVPGYS 643
Query: 601 LVHINGKTCTF 611
V + TF
Sbjct: 644 SVEVGNLVHTF 654
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 310/597 (51%), Gaps = 5/597 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + V +A+ +F MK+ +E + T+ + ACA L + + +
Sbjct: 269 WNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTI 328
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ + +FV +DM++K +D A LF+ + +D SWNA++VG E+ +
Sbjct: 329 KNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIH 388
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ M L G+ D V+ + A + + K +H + + ++ +V ++ I Y+
Sbjct: 389 MLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYS 448
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K D++ V ++ ++V N +I G ++ D++++ ++ ++ DG +P T
Sbjct: 449 KHGDVESCRKVLAQVDAS--SIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTF 506
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+LS C + + G+ VH + + GF + D SV +L+ Y K + A L M
Sbjct: 507 SSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMP 566
Query: 321 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
D + V WTA++SGYAQ G ++L F+ M + PD VT S++ C + AL GK
Sbjct: 567 DHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGK 626
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
G +A+IDMYSKCG I + E F L K ++ W +MI G A N
Sbjct: 627 EIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKN 686
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EAL LF +M + ++ + VTFL VL AC HAG + +G YF+ M+KVY + P ++H
Sbjct: 687 GYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDH 746
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C DLLGR G L+EA + + +P + D IW T L AC++H++ E GE A L ELE
Sbjct: 747 YACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELE 806
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P +++ YV ++N+YA G W R M+ KFPG S + + KT F V+D
Sbjct: 807 PQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQD 863
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/529 (25%), Positives = 259/529 (48%), Gaps = 6/529 (1%)
Query: 10 LNKIYRSSTINQWNSQIRE-AVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
L+++ S+ WN+ I A H+ L++ M+ + P TF + A A +
Sbjct: 155 LHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANAT 214
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
F+ + +H V+ +++FV ++++++YAKC + A +FD +++V WNAM+
Sbjct: 215 AFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLN 274
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G + + + + +F M+ +G++AD T + + A H L + V I +DA
Sbjct: 275 GLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDA 334
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V N + ++K + A+ +F I + VSWN+++ G T+ ++ +++++ +
Sbjct: 335 SLFVANATLDMHSKFGAIDDAKTLFNLIT--YKDTVSWNALLVGLTHNEEDEEAIHMLKG 392
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M DG PD + +++++C A G+ +H + + + +V ++LI YSK GD
Sbjct: 393 MNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGD 452
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
++S R + + + V +I+G Q DEA+ LF + G P T S++SG
Sbjct: 453 VESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSG 512
Query: 369 CGQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVV 426
C + +GK Y SG L D+ V +L+ Y K DA +L +P+ K +V
Sbjct: 513 CTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLV 572
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
WT +++G A NG ++L F +M D+ P+ VTF ++L+AC+ L G L+
Sbjct: 573 EWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLI 632
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
K S + D+ + G + + + + + K D +W +++
Sbjct: 633 IK-SGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 199/417 (47%), Gaps = 19/417 (4%)
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDC---------------AYKLFDKMP 116
++ MI G+ F + + T M M + DR+ C A L +MP
Sbjct: 100 WASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMP 159
Query: 117 -DRDVASWNAMIVGFAQMGFLE-KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
+WNA+I G+AQ +E +V L+ +MR G+ T + AA +A
Sbjct: 160 APSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEG 219
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+ VH+ + G+DA+V V ++ I+ YAKC + A LVF G + VV WN+++ G
Sbjct: 220 RQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDC--SGEKNVVMWNAMLNGLV 277
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+ +++ + +M G D T VS+L +C ++ GR V I D +
Sbjct: 278 RNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLF 337
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V N + M+SK G ID A+ LF+ + + VSW A++ G + +EA+ + M G
Sbjct: 338 VANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDG 397
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
PD V+ ++I+ C A E GK A + N V ++LID YSK G + R
Sbjct: 398 VTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCR 457
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
++ + ++V +IAG N EA+DLF Q++ L+P+ TF ++L CT
Sbjct: 458 KVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT 514
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 195/431 (45%), Gaps = 37/431 (8%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+ P+ AC++L + + H K S F +V+MYA+C R+ A
Sbjct: 27 VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
++F + D W +MI G+ + G ++ +CLF M +G D VT + + A
Sbjct: 87 RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCA----- 141
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
++A + D + L+ R + V+WN++
Sbjct: 142 ---------------------------LTALGRLEDART--LLHR--MPAPSSTVAWNAV 170
Query: 230 IGGCTYGDKFD-DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
I G + + Y+ M G P +T S+LS+ A ++GR VH+ + +G
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHG 230
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
D +V V ++LI++Y+KCG I A +FD ++ V W AM++G + EA+++F
Sbjct: 231 LDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFL 290
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M+ G D T +S++ C + LG+ + ++ V NA +DM+SK G
Sbjct: 291 YMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFG 350
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+I DA+ LF + K VSW ++ G N E EA+ + M + P+ V+F V+
Sbjct: 351 AIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVIN 410
Query: 469 ACTHAGFLEKG 479
AC++ E G
Sbjct: 411 ACSNIRATETG 421
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G RPD + + LS+C ALV G+ H G L++MY++CG + A
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R +F G+ V W +MISGY + G EA+ LF ME G PD VT
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVT----------- 134
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
C A++ + G + DAR L + +P + V+W +
Sbjct: 135 ------------------------CVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAV 170
Query: 432 IAGCA-LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA-GFLE 477
I+G A +G E L+ M L P R TF ++L A +A F+E
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIE 218
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 71/138 (51%)
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
LD +R G PD + + +S C + GAL GK A GL A
Sbjct: 12 LDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAA 71
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L++MY++CG +GDAR +F + V W +MI+G G F EA+ LF +M ++ P+
Sbjct: 72 LVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPD 131
Query: 460 RVTFLAVLQACTHAGFLE 477
RVT +AV+ A T G LE
Sbjct: 132 RVTCVAVVCALTALGRLE 149
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 314/575 (54%), Gaps = 19/575 (3%)
Query: 52 PNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDR-LDCA 108
PN+ + + +AC+ SDF+ ++ G ++K+ F SD+ V +++DM+ K + + A
Sbjct: 164 PNDYCYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
YK+FDKM + +V +W MI QMGF + + F +M L G ++D T+ + A
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN---DLKMAELVFRGIEEGLRTVVS 225
++LSL K +HS+ I G+ DV + + YAKC+ + VF +E+ +V+S
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED--HSVMS 338
Query: 226 WNSIIGG----CTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLV 280
W ++I G C +++N + MI G P+ T S +C G+ V
Sbjct: 339 WTALITGYMKNCNLAT---EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
G + SV N++ISM+ K ++ A+ F+ + ++ VS+ + G + +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
++A +L + T S++SG G++ G+ + GL N VCNAL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
I MYSKCGSI A +F + + V+SWT+MI G A +G + L+ F+QM+E ++PN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VT++A+L AC+H G + +GW +FN M + +++ P++ HY+CM DLL R G L +A +F+
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
+MP ++D +W T L AC++H N E+G+ A ++ EL+P+ A Y++++NIYA G+W+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R MK + K G S + + K F V D
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGD 730
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 226/475 (47%), Gaps = 15/475 (3%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKACAKLSDFLYSQ 74
S+ IN + I ++ + A+ M ++ I P +++TF + K+C + DF +
Sbjct: 23 SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGK 82
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP---DRDVASWNAMIVGFA 131
++H +++ D + +++ +Y+K A +F+ M RDV SW+AM+ +
Sbjct: 83 LVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYG 142
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADV 190
G + +F +G+ + + +A ++ + + + F + G ++DV
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 191 SVCNTWISAYAKC-NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + I + K N + A VF + E VV+W +I C +++ F+ M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--- 306
+ GF D T+ S+ S+C E L G+ +HS I G DV +L+ MY+KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSAD 318
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEV-PDLVTVLS 364
G +D R +FD M D + +SWTA+I+GY + +L EA+ LF M G V P+ T S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
CG +GK A GL N V N++I M+ K + DA+ F +L EK
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+VS+ T + G N F +A L ++ E +L + TF ++L + G + KG
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A L + + ++ + TF + A + + IH +VK + V +
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+ MY+KC +D A ++F+ M +R+V SW +MI GFA+ GF +VL F M G++ +
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 156 VTVMGLTQAAIHAKHLS 172
VT + + A H +S
Sbjct: 576 VTYVAILSACSHVGLVS 592
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 287/525 (54%), Gaps = 12/525 (2%)
Query: 98 MYAKCDRLDCAYKLF-DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY+KC++++ A +F D + +V ++NA+I GF GF E+ + MR G+ D
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T +A + + K +H G++ DV + + ++ Y K ++ A++ F
Sbjct: 61 TFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE-- 115
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E +R VV WN+++ G +F+ L +R M + P TV +LS L
Sbjct: 116 ELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNN 175
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR++H + G+D V+V N+LI MY KC I+ A +F+ M ++ SW ++ S + Q
Sbjct: 176 GRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQ 235
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK----- 391
GD D LRL M AG PDLVTV +++ C AL G+ Y GL
Sbjct: 236 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKD 295
Query: 392 -DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
D+V++ NA+IDMY+KCGS+ DA +F + K V SW MI G ++G EAL++F +
Sbjct: 296 IDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSR 355
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
M E+ L+P+ VTF+ VL AC+HAGF+ +G + M Y V P + HY+C+ D+LGR G
Sbjct: 356 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAG 415
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMAN 570
+L EA + +MPI+++ +W LL AC++H++ + E A R+FELEP YV M+N
Sbjct: 416 QLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 475
Query: 571 IYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+Y GR++ V +R M++ V+K PG S + + F D
Sbjct: 476 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSAD 520
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 213/442 (48%), Gaps = 13/442 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I + + +++M+ + P+ TFP KAC D L + IHG +
Sbjct: 27 FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL---DVLEIKKIHGLLF 83
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+F+ + +V+ Y K ++ A F+++P RDV WNAM+ G+AQ+G E VL
Sbjct: 84 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 143
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + TV G+ L+ + +H F + +G D+ V+V N+ I Y
Sbjct: 144 TFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 203
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F + E + + SWNSI D +L M+ G +PD+ TV
Sbjct: 204 KCKCIEDALEIFEMMRE--KDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 261
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGF-----DL-DVSVINTLISMYSKCGDIDSARFL 315
++L +C AL+ GR +H + I G D+ DV + N +I MY+KCG + A +
Sbjct: 262 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 321
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M ++ SW MI GY G +EAL +F M PD VT + ++S C +G +
Sbjct: 322 FERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 381
Query: 376 ELGKWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
G+ F + + +IDM + G + +A EL +P E V W ++A
Sbjct: 382 SQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 441
Query: 434 GCALNGEFVEALDLFHQMMELD 455
C L+ V A ++ EL+
Sbjct: 442 ACRLHKHAVLAEVAAQRVFELE 463
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 294/558 (52%), Gaps = 6/558 (1%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
K AKL + +H H++K + + +Q ++ +Y KC + K+FD+MP ++V
Sbjct: 81 KISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVV 140
Query: 122 SWNAMIVGFAQ----MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
SWN +I G + + F M L + + +T+ GL +A+I + + + +
Sbjct: 141 SWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQL 200
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD 237
H F + G D++ V + + +YAK + A+ F + R +V WN ++
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSS--RDLVLWNVMVSCYALNG 258
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+ ++ M +G + D T S+++SC + G+ VH I FDLDV V +
Sbjct: 259 VQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVAS 318
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MYSK +I+ AR FDGM + VSWT M GY Q GD E +RL M P
Sbjct: 319 ALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYP 378
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D + + S++S CG A Y G + + + NAL+ YSKCGSIG A + F
Sbjct: 379 DELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSF 438
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
++ E ++SWT+++ A +G + +D+F +++ ++RP++V FL VL AC H GF+
Sbjct: 439 SSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVL 498
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+G YFNLM VYQ+ P+ HY+ + DLLGR G L EA++ + SMP++ + G L A
Sbjct: 499 EGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGA 558
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
CK++RN+ + + + +LF +EP+ Y M+N+YA G W VA +R +M+ K P
Sbjct: 559 CKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFKVP 618
Query: 598 GQSLVHINGKTCTFTVED 615
G S + G+ TF D
Sbjct: 619 GCSWMETAGEVHTFVSRD 636
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 197/408 (48%), Gaps = 11/408 (2%)
Query: 21 QWNSQIREAVDKNEAHKALLL----FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
WN+ I V+ N + L FR+M + PN +T + +A +L+D + +
Sbjct: 141 SWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQL 200
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+KS F S+ FV + +VD YAK +D A FD++ RD+ WN M+ +A G
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQ 260
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K +F MRL G++ D T + + L K VH I + D DV V +
Sbjct: 261 GKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASAL 320
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD--DSLNFYRHMIYDGF 254
+ Y+K +++ A F G+ ++ +VSW ++ G YG D + + + MI
Sbjct: 321 VDMYSKNENIEDARKAFDGMJ--VKNIVSWTTMXVG--YGQHGDGKEXMRLLQEMIRVYT 376
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD + S+LSSC A + VH++ + GF+ +S+ N L+S YSKCG I SA
Sbjct: 377 YPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQ 436
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG- 373
F + + +SWT+++ YA G + + +F + ++ PD V L ++S C G
Sbjct: 437 SFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGF 496
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
LE +F+ + + ++ID+ + G + +A L ++P
Sbjct: 497 VLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMP 544
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 157/359 (43%), Gaps = 35/359 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + KA +F+ M+ ++ + TF + +C L + +HG I+
Sbjct: 247 WNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLII 306
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+ V + +VDMY+K + ++ A K FD M +++ SW M VG+ Q G ++ +
Sbjct: 307 RLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMR 366
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M V D + + + + + S + VH++ + G +A +S+ N +SAY+
Sbjct: 367 LLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYS 426
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A F + E ++SW S++G + ++ + ++ RPD
Sbjct: 427 KCGSIGSAFQSFSSVAE--PDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAF 484
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +LS+C G V G+HY N +I++Y D +
Sbjct: 485 LGVLSAC------AHGGFV-LEGLHY--------FNLMINVYQIMPDSE----------- 518
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+T++I + G LDEA+ L +M P T+ + + C + L +W
Sbjct: 519 ----HYTSIIDLLGRAGFLDEAVNLLTSMPVE---PRSDTLGAFLGACKVYRNVGLARW 570
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I W + + + + L + M + P+ L I +C LS +H
Sbjct: 344 NIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVH 403
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++V++ F + + + +V Y+KC + A++ F + + D+ SW +++ +A G +
Sbjct: 404 AYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSK 463
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+ + +F + ++ D V +G+ A H +L+ +H F + I V
Sbjct: 464 QGVDVFEKILSSNVRPDKVAFLGVLSACAHGGF--VLEGLHYFNLMINV 510
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 305/564 (54%), Gaps = 14/564 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C ++ ++ +HGH+ K+ +D+FV T++V+ Y +C A +LFD MP+R+V +W
Sbjct: 88 CVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTW 147
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
A++ G+ L +F M +G T+ A + + + L K VH + I
Sbjct: 148 TALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIK 207
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK-FDDS 242
G ++ S+ N+ S YAK L A F I E + V++W ++I C ++ +
Sbjct: 208 YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE--KNVITWTTMISACAEDEECVELG 265
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L+ + M+ DG P+ T+ S++S C L G+ V + G + ++ V N+ + +
Sbjct: 266 LSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYL 325
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ-----KGDLD------EALRLFFAME 351
Y + G+ D A LF+ M D + ++W AMISGYAQ K DL +AL +F ++
Sbjct: 326 YLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLK 385
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ PDL T S++S C ALE G+ G +V+V +AL++MY+KCG I
Sbjct: 386 RSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQ 445
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
DA + F +P +T V+WT+MI+G + +G+ EA+ LF +M +RPN +TF+++L AC+
Sbjct: 446 DANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS 505
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
+AG +E+ YF++M K Y + P ++HY CM D+ R G++++A F++ + + IW
Sbjct: 506 YAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIW 565
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
+L+ C+ H N+E+ Y A +L EL+P Y+ + N+Y RW VA +R +MK+
Sbjct: 566 SSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQE 625
Query: 592 QVKKFPGQSLVHINGKTCTFTVED 615
V +S + I K F D
Sbjct: 626 DVGILRDRSWITIKDKVYFFRAND 649
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 215/449 (47%), Gaps = 20/449 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + ++ L +F M + P++ T AC D + +HG+ +
Sbjct: 147 WTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAI 206
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ-MGFLEKVL 140
K S + ++ +YAK LD A + F ++P+++V +W MI A+ +E L
Sbjct: 207 KYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGL 266
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF +M + G+ + T+ + L+L K V +F IG + ++ V N+ + Y
Sbjct: 267 SLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLY 326
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-------------DSLNFYR 247
+ + A +F +E+ ++++WN++I G Y D +L +R
Sbjct: 327 LRKGETDEAMRLFEQMEDA--SIITWNAMISG--YAQIMDSAKDDLQARSRGFQALTIFR 382
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
+ +PD+ T S+LS C AL QG +H+ I GF DV V + L++MY+KCG
Sbjct: 383 DLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG 442
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
I A F M RT V+WT+MISGY+Q G EA++LF M AG P+ +T +S++S
Sbjct: 443 CIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 502
Query: 368 GCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTV 425
C +G +E + +FD ++ V +IDM+ + G + DA E
Sbjct: 503 ACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNE 562
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMEL 454
W++++AGC +G A +++EL
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADKLLEL 591
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 114/223 (51%), Gaps = 1/223 (0%)
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ +G V LL CV +L R VH H G D+ V +L++ Y +CG
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
AR LFDGM +R V+WTA+++GY L +F M G P T+ + ++
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C S ++LGK YA G + + N+L +Y+K GS+ A F+ +PEK V++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248
Query: 429 TTMIAGCALNGEFVE-ALDLFHQMMELDLRPNRVTFLAVLQAC 470
TTMI+ CA + E VE L LF M+ + PN T +V+ C
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLC 291
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 153/360 (42%), Gaps = 26/360 (7%)
Query: 5 SLPPRLNKIYRSSTIN--QWNSQIREAVDKNE-AHKALLLFRRMKKNDIEPNNLTFPFIA 61
SL L +R N W + I + E L LF M + + PN T +
Sbjct: 229 SLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVM 288
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
C D + + K +++ V+ + + +Y + D A +LF++M D +
Sbjct: 289 SLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASII 348
Query: 122 SWNAMIVGFAQM-------------GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+WNAMI G+AQ+ GF + L +F +++ ++ D T +
Sbjct: 349 TWNAMISGYAQIMDSAKDDLQARSRGF--QALTIFRDLKRSVMKPDLFTFSSILSVCSAM 406
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L + +H+ I G +DV V + ++ Y KC ++ A F +E RT V+W S
Sbjct: 407 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAF--LEMPTRTFVTWTS 464
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI--- 285
+I G + + +++ + M G RP+ T VSLLS+C + + H +
Sbjct: 465 MISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAE--HYFDMMKK 522
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSA-RFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
Y + V +I M+ + G ++ A F+ + W+++++G G+++ A
Sbjct: 523 EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAF 582
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 296/556 (53%), Gaps = 10/556 (1%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR--LDCAYKLFDKMPDRD 119
+ C +S + IH ++++ + D F + +V A D L A +F+++P+
Sbjct: 48 EKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPT 104
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
+ N++I G+ + + + M L G+ D T L ++ L K +H
Sbjct: 105 TFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHC 161
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+G +D + NT ++ Y+ C L A VF + ++VVSW ++IG D
Sbjct: 162 HSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN--KSVVSWATMIGAYAQWDLP 219
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+++ +R M +P+ T+V++L++C L + VH + G + + L
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSAL 279
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+ +Y KCG AR LF+ M ++ W MI+G+ + D +EAL LF M+ +G D
Sbjct: 280 MDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 339
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
VT+ S++ C GALELGKW Y ++ +V + AL+DMY+KCGSI A +F
Sbjct: 340 VTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQE 399
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+PEK V++WT +I G A+ G+ ++AL+LFH+M +++P+ +TF+ VL AC+HAG + +G
Sbjct: 400 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 459
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
YFN M Y + P + HY CM D+LGR G++ EA D +Q+MP+ D + LL AC+
Sbjct: 460 IAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACR 519
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
IH N+ + E A +L EL+P + YV ++NIY+ W+ +R +M +KK PG
Sbjct: 520 IHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGC 579
Query: 600 SLVHINGKTCTFTVED 615
S + + G F D
Sbjct: 580 SAIEVGGVVHEFVKGD 595
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 229/450 (50%), Gaps = 8/450 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N+I +T NS IR +KN +A+L ++ M ++P+ TFP + K+C L +
Sbjct: 97 FNQIPNPTTFT-CNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE 155
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ +H H K F SD ++Q T+++MY+ C L A K+FDKM ++ V SW MI
Sbjct: 156 ---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 212
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+AQ + + LF M + ++ + +T++ + A ++ L K VH + G+
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ + + Y KC +A +F + E + + WN +I G ++++L+ + M
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMPE--KNLFCWNIMINGHVEDSDYEEALSLFNEM 330
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
G + D T+ SLL +C AL G+ +H + ++DV++ L+ MY+KCG I
Sbjct: 331 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 390
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+SA +F M ++ ++WTA+I G A G +AL LF M+ + PD +T + +++ C
Sbjct: 391 ESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 450
Query: 370 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVS 427
+G + G +F++ G++ ++ ++DM + G I +A +L +P
Sbjct: 451 SHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 510
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+++ C ++G V A Q++ELD +
Sbjct: 511 LVGLLSACRIHGNLVVAERAAQQLIELDPK 540
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 303/601 (50%), Gaps = 9/601 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I H+ + LF+ + +D+ + TF C + D ++IH I
Sbjct: 9 WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S + + +++DMY KC R+D A +F+ + D SWN++I G+ ++G +++L
Sbjct: 69 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128
Query: 142 LFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L M G+ + + +A + + + K +H + +G+D DV V +
Sbjct: 129 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDT 188
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC----TYGDKF-DDSLNFYRHMIYDGF 254
YAK DL+ A +F+ + + VV +N++I G T D+F ++++ + M G
Sbjct: 189 YAKIGDLEDATKIFKLMPD--PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 246
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+P T S+L +C EA G+ +H+ Y D + N L+ +YS G I+
Sbjct: 247 KPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLK 306
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F VSWT++I G+ Q G + L LF + +G PD T+ M+S C A
Sbjct: 307 CFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAA 366
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
++ G+ YA G+ + ++ N+ I MY+KCG I A F +VSW+ MI+
Sbjct: 367 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 426
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A +G EA+DLF M + PN +TFL VL AC+H G +E+G YF +M K + + P
Sbjct: 427 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 486
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ H +C+ DLLGR G+L EA F+ + D +W +LL AC++H+ + G+ VA R+
Sbjct: 487 NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERV 546
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
ELEP +AA YV + NIY G +R +MK VKK PG S + + +F
Sbjct: 547 IELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAG 606
Query: 615 D 615
D
Sbjct: 607 D 607
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 234/517 (45%), Gaps = 49/517 (9%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
MP R+V SWN++I G+ QMGF +V+ LF R+ ++ D T L L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+ +H+ G+ V + N+ I Y KC + A LVF +E VSWNS+I G
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADE--LDSVSWNSLIAGYV 118
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC--PEALVQGRLVHSHGIHYGFDLD 292
D+ L M+ G + + S L +C ++ G+++H + G DLD
Sbjct: 119 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 178
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL-----DEALRLF 347
V V L+ Y+K GD++ A +F M D V + AMI+G+ Q + +EA+ LF
Sbjct: 179 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 238
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
F M++ G P T S++ C A E GK L+ + + NAL+++YS
Sbjct: 239 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 298
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
GSI D + F++ P+ VVSWT++I G NG+F L LFH+++ +P+ T +L
Sbjct: 299 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358
Query: 468 QACT-----------HAGFLEKGWGYFNL-------------------MTKVYQVNPELN 497
AC HA ++ G G F + MT NP++
Sbjct: 359 SACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIV 418
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+S M + G KEA+D + M I + + +L AC +E G R
Sbjct: 419 SWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG----LRY 474
Query: 555 FEL--EPHSAAPYVE-MANIYALGGRWDGVANLRTMM 588
FE+ + H P V+ A I L GR +A + +
Sbjct: 475 FEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFI 511
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 277/482 (57%), Gaps = 3/482 (0%)
Query: 37 KALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+AL LF R+ + ++P++ T+P + KAC L + Y +MIH H++KS F DI V +++
Sbjct: 12 EALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSL 71
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
V ++AKC+ A +LFD+MP+RDVA WN +I + Q G EK L +F MR G + +
Sbjct: 72 VSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNS 131
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
VT+ + + L K +H + G+ D V + + Y K L +A+ +F
Sbjct: 132 VTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQ 191
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ + +T+V+WNS+I G + + + + M +G +P VTT+ S+L +C L
Sbjct: 192 MPK--KTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQ 249
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
GR +H + + LD+ V + LI +Y KCG + SA +F + V W MISGY
Sbjct: 250 HGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYV 309
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
GD +AL ++ M+ A PD VT S++S C Q ALE GK N L+ N +
Sbjct: 310 TIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEI 369
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V AL+DMY+KCG++ +A +F LPE+ ++SWT++I+ +G+ +EAL LF ++ +
Sbjct: 370 VMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEELQQSK 429
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
P+ VTFLAVL AC+HAG ++KG+ YFN M Y + P L HYSC+ DLLGR + +
Sbjct: 430 ASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLIDLLGRIQEQSQE 489
Query: 516 LD 517
L+
Sbjct: 490 LN 491
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 207/387 (53%), Gaps = 5/387 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I +A KAL +F +M+ + EPN++T + +CA+L D + IH ++
Sbjct: 99 WNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVM 158
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ D FV + +VDMY K LD A +F++MP + + +WN++I G++ ++ +
Sbjct: 159 QNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIE 218
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ M + G + T+ + A A HL + +H + + V D+ V + I Y
Sbjct: 219 LFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYF 278
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC ++ AE +F + + VV WN +I G T GD + +L+ Y M +PD T
Sbjct: 279 KCGKVQSAENIFYMLPKA--NVVLWNVMISGYVTIGD-YVKALDMYDEMKIASVKPDAVT 335
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+LS+C AL +G+ +H+ + + V+ L+ MY+KCG +D A +F+ +
Sbjct: 336 FSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLP 395
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R +SWT++IS Y G EALRLF ++ + PD VT L+++S C +G ++ G +
Sbjct: 396 ERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYY 455
Query: 381 FDNYACSG-GLKDNVMVCNALIDMYSK 406
+ N + G+K + + LID+ +
Sbjct: 456 YFNQMITNYGIKPGLEHYSCLIDLLGR 482
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 135/287 (47%), Gaps = 7/287 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS I ++ + + LF RM +P T I AC++ + + + IH
Sbjct: 196 TLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIH 255
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G+ V++ DIFV + ++++Y KC ++ A +F +P +V WN MI G+ +G
Sbjct: 256 GYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYV 315
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
K L ++ M++ ++ D VT + A L K +H+ ++ + V +
Sbjct: 316 KALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALL 375
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + A VF + E R ++SW SII + ++L + + PD
Sbjct: 376 DMYAKCGAVDEALSVFNKLPE--RDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPD 433
Query: 258 VTTVVSLLSSCVCPEALVQG-----RLVHSHGIHYGFDLDVSVINTL 299
T +++LS+C + +G +++ ++GI G + +I+ L
Sbjct: 434 AVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLIDLL 480
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 314/593 (52%), Gaps = 12/593 (2%)
Query: 32 KNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF----LYSQMIHGHIVKSPFW- 86
+++ +A +F+ MK + +E N+ + + + S+ Q +H ++ +S
Sbjct: 430 QHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVD 488
Query: 87 SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM 146
+ I + +V+MY KC +D A +F MP +D SWN+MI G E+ + F+ M
Sbjct: 489 ARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTM 548
Query: 147 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
+ G+ +V+ + L+L + +H G G+D DVSV N ++ YA+ + +
Sbjct: 549 KRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSI 608
Query: 207 KMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+ VF + E VSWNS IG Y +L ++ M+ G+RP+ T +++L
Sbjct: 609 NECQKVFFQMPE--YDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINIL 666
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT-R 324
++ L G +H+ + Y D ++ N L++ Y KC ++ +F M +R
Sbjct: 667 AAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDE 726
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
VSW +MISGY G L +A+ L + M G+ D T +++S C LE G
Sbjct: 727 VSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHAC 786
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A L+ +V+V +AL+DMY+KCG I A F +P + + SW +MI+G A +G +A
Sbjct: 787 AVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKA 846
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L +F +M + P+ VTF+ VL AC+H G +++G+ +F M +VY ++P + H+SCM D
Sbjct: 847 LKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVD 906
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC--KIHRNIEIGEYVAYRLFELEPHSA 562
LLGR G +K+ DF+++MP+ + IW T+L AC RN E+G+ A L ELEP +A
Sbjct: 907 LLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNA 966
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N++A GG W+ V R M++ VKK G S V++ F D
Sbjct: 967 VNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGD 1019
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 220/458 (48%), Gaps = 8/458 (1%)
Query: 22 WNSQIREAVDKNEA-HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I +D NE +A+ F MK+N + P+N + +C+ L + IHG
Sbjct: 525 WNSMI-SGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEG 583
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM-GFLEKV 139
K D+ V ++ +YA+ D ++ K+F +MP+ D SWN+ I A+ + +
Sbjct: 584 FKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQA 643
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L F M G + + VT + + A L L +H+ + V D ++ N ++
Sbjct: 644 LKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAF 703
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC ++ E++F + E R VSWNS+I G + +++ M+ G + D
Sbjct: 704 YGKCEQMEDCEIIFSRMSE-RRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGF 762
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T ++LS+C L +G VH+ + + DV V + L+ MY+KCG ID A F+ M
Sbjct: 763 TFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELM 822
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
R SW +MISGYA+ G +AL++F M+ G+ PD VT + ++S C G ++ G
Sbjct: 823 PVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGY 882
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMI-AGCA 436
K F + GL + + ++D+ + G + + +P + ++ W T++ A C
Sbjct: 883 KHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCR 942
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
NG E +M+ ++L P +L AG
Sbjct: 943 ANGRNTELGQRAAKML-IELEPQNAVNYVLLSNMHAAG 979
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 210/431 (48%), Gaps = 22/431 (5%)
Query: 66 KLSDFLY-SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
K S LY + +H + K+ F D+F T++++Y + L A KLFD+MP +++ SW+
Sbjct: 151 KTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWS 210
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH--AKHLSLLKSVHSFGI 182
+I G+ Q ++ LF + G+ + V +A + + L +H+F
Sbjct: 211 CLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFIC 270
Query: 183 HIGVDADVSVCNTWISAYAKCN-DLKMAELVFRGIEEGLRTVVSWNSIIG-GCTYGDKFD 240
+ +D+ + N +S Y+ C+ + A VF I+ R V+WNSII C GD
Sbjct: 271 KLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIK--FRNSVTWNSIISVYCRRGDAV- 327
Query: 241 DSLNFYRHMIYDG----FRPDVTTVVSLLSSCV----CPEALVQGRLVHSHGIHYGFDLD 292
+ + M +G RP+ T+ SL+++ C L++ L GF D
Sbjct: 328 SAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIE--KSGFLRD 385
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ V + L++ +++ G +D A+ +F M DR V+ ++ G A++ +EA ++F M+
Sbjct: 386 LYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKD 445
Query: 353 AGEV--PDLVTVLSMISGCGQ-SGALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCG 408
E+ LV +LS + G+ Y GL D + + NAL++MY KC
Sbjct: 446 LVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCT 505
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+I +A +F +P K VSW +MI+G N F EA+ FH M + P+ + ++ L
Sbjct: 506 AIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLS 565
Query: 469 ACTHAGFLEKG 479
+C+ G+L G
Sbjct: 566 SCSSLGWLTLG 576
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 129/266 (48%), Gaps = 21/266 (7%)
Query: 227 NSIIGGCTYGD-----------KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
N+ + GC + + K++ + F RH + + + S +L
Sbjct: 100 NTCVAGCDFPEMASHLFMRLLNKYNSTYTFLRHYTFS--HSQLQQLDSEFDRYKTSSSLY 157
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
+H GF DV NTLI++Y + G++ SAR LFD M + VSW+ +ISGY
Sbjct: 158 DANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYT 217
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA--LELGKWFDNYACSGGLKDN 393
Q DEA LF + ++G +P+ V S + C Q G+ ++LG + C +
Sbjct: 218 QNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSD 277
Query: 394 VMVCNALIDMYSKC-GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM- 451
+++ N L+ MYS C GSI DA +F + + V+W ++I+ G+ V A LF M
Sbjct: 278 MILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQ 337
Query: 452 ---MELDLRPNRVTFLA-VLQACTHA 473
+EL+LRPN T + V AC+ A
Sbjct: 338 MEGVELNLRPNEYTLCSLVTAACSLA 363
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 313/602 (51%), Gaps = 18/602 (2%)
Query: 7 PPRLNKIYRSSTI--NQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
P + + R ST N+ Q + A+ AL+ ++ D P + + + C
Sbjct: 25 PGKAKRSGRHSTFFDNRRQQQGKSALPGG-LDNALVWIDSHQQEDCAP---AYGNLLRDC 80
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
+L+ + IH H+VK+ ++ +++V +V MY+KC L+ A K+FD M RD SW+
Sbjct: 81 GELA---AGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWS 137
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGI 182
MI G+ + G + + L+ M I D T + A ++ + L + K +H+
Sbjct: 138 KMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMK 194
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
I + DV V + ++ +AKC LK + VF + V+ WNS+I + ++
Sbjct: 195 RIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCR--WKDVLFWNSMIVAYSQSGHPREA 252
Query: 243 LNFYRHMIYDG--FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+ ++ M P+ T ++L++C E L QG+ VH + GF D + N+L+
Sbjct: 253 IELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLV 312
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
+MY+KCG I AR +FDGM RT VSWT +IS Y +KG EAL L+ M + G P+ +
Sbjct: 313 NMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGI 372
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T S++S C GALE GK + G K ++ V NAL+ +Y KCGS+ AR++F +
Sbjct: 373 TFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRM 432
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+ VVSWT MI+ A + EA+ L+ M ++ + + VL AC+ AG LE
Sbjct: 433 KIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESAR 492
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
YF +T+ +L Y CMA +LGR G+L EA + + MP +++ W LL ACK
Sbjct: 493 HYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKA 552
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H ++E G VA LF LEP + APYV ++NIY GR + A +R M G+S
Sbjct: 553 HNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKMGDVIAAAGSGES 612
Query: 601 LV 602
++
Sbjct: 613 II 614
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 169/389 (43%), Gaps = 23/389 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS I +A+ LF+ M + +EPN +T+ + AC+ + D + +H
Sbjct: 236 WNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQ 295
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+V + F D + ++V+MYAKC + A ++FD M R V SW +I + + G +
Sbjct: 296 MVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREA 355
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L L+ M G++ + +T + A L K+VH+ G D++V N +S
Sbjct: 356 LDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSL 415
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC + A VF ++ +R VVSW ++I + ++++ Y+ M +G +
Sbjct: 416 YGKCGSVDSARKVFDRMK--IRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSF 473
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHY--------GFDLDVSVINTLISMYSKCGDIDS 311
++L++C L R HY G + + ++ + G +
Sbjct: 474 IYGTVLTACSQAGLLESAR-------HYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAE 526
Query: 312 ARFLFDGMC-DRTRVSWTAMISGYAQKGDLDEALR---LFFAMEAAGEVPDLVTVLSMIS 367
A L M + V+W +++ D++ R + F +E E P ++ ++
Sbjct: 527 AEELLAVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVA 586
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMV 396
Q A + + + + G ++++V
Sbjct: 587 AGRQEEAARVRRKMGDVIAAAGSGESIIV 615
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 314/582 (53%), Gaps = 5/582 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+S I VDK EA++AL +FR + ++ + + + +AC+KL ++ IHG+IV
Sbjct: 168 WSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIV 227
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + + ++++MY+ CD L A ++F M ++ SW +MI + + G+ ++
Sbjct: 228 RRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFE 287
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISAY 200
+F M + ++ + +T+MG+ ++ L K +H + + G+ D + I Y
Sbjct: 288 IFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELY 347
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A C L E V I E R VVSWN+++ F+++L + M G D +
Sbjct: 348 AGCGKLGYCEKVLLAIGE--RNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFS 405
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S +S+C +L GR +H + I L V N LI MYS+CG DSA +F+ +
Sbjct: 406 LSSAISACGNVGSLQLGRQIHGYAIKRCI-LGEFVKNALIGMYSRCGFSDSAYMIFNDIK 464
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ V+W ++ISG+ Q G+ EA+ L M V LS I C LE GKW
Sbjct: 465 QKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKW 524
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G++ ++ + AL DMY+KCG + A +F+++ EK+VVSW+ MI+G ++G
Sbjct: 525 LHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGR 584
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
A+ F+QM+EL ++PN +TF+ +L AC+H+G +E+G YF+LM + + V P H++
Sbjct: 585 IDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLM-RDFGVEPSSEHFA 643
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R G + A + SMP +DA + G LL C+IH+ +++ + L ++
Sbjct: 644 CLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLNGCRIHQRMDMIPEIEKDLLKIRTS 703
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
Y ++NIYA G W N R +M+R+ KK PG S +
Sbjct: 704 DTGHYSLLSNIYAEIGNWAARENTRGIMERSGYKKVPGYSAI 745
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 273/536 (50%), Gaps = 8/536 (1%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+ Y++ W I+ V + +A+LL+ +M N+ + + FP + +ACA D
Sbjct: 57 ETYQNPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMF 116
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+HG I+K F +D F++T+++ +Y + L A K+FD +P RD+ SW+++I +
Sbjct: 117 IGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYV 176
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G + L +F + ++ D+V ++ +T+A L L KS+H + + VD +
Sbjct: 177 DKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEA 236
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ N+ I Y+ C+DL AE +F + +T +SW S+I F ++ + M+
Sbjct: 237 LDNSLIEMYSSCDDLYSAERIFVNMAN--KTFISWTSMIYCYNRSGWFKEAFEIFVKMLE 294
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDID 310
P+V T++ +L SC L +G+L+H + + G D + LI +Y+ CG +
Sbjct: 295 LKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLG 354
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ + +R VSW ++S A++G +EAL LF M+ G + D ++ S IS CG
Sbjct: 355 YCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACG 414
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G+L+LG+ YA + V NALI MYS+CG A +F + +K+ V+W +
Sbjct: 415 NVGSLQLGRQIHGYAIKRCILGE-FVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNS 473
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKV 489
+I+G +G +EA+ L QM L+ V FL+ +QAC LEKG W + L+ +
Sbjct: 474 IISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLI--M 531
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
Y V +L + + D+ + G L+ A SM KS W ++ +H I+
Sbjct: 532 YGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVS-WSAMISGYGMHGRID 586
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 193/420 (45%), Gaps = 8/420 (1%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
++C L +H H+ + + T +++ YA+ + + +F+ + D
Sbjct: 9 RSCKTLRQL---NQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSF 65
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
W +I E+ + L+ M Q + +A + + VH
Sbjct: 66 MWGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRI 125
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
I G D D + + + Y + L A VF I +R +VSW+SII + ++
Sbjct: 126 IKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIP--VRDLVSWSSIISSYVDKGEANE 183
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+L +R ++ + + D ++S+ +C L + +H + + D ++ N+LI
Sbjct: 184 ALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIE 243
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MYS C D+ SA +F M ++T +SWT+MI Y + G EA +F M P+++T
Sbjct: 244 MYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVIT 303
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYA 419
++ ++ C L GK YA G+ +D+ + LI++Y+ CG +G ++ A
Sbjct: 304 IMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCL-GPVLIELYAGCGKLGYCEKVLLA 362
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ E+ VVSW T+++ A G F EAL LF QM + L + + + + AC + G L+ G
Sbjct: 363 IGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLG 422
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 315/586 (53%), Gaps = 5/586 (0%)
Query: 31 DKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
+ E ++ L FR M P+++ + +AC +L ++ HG+I+K +D F
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
V ++++ MYAKC L A +F+ + R ++W AMI + G+L++ L LF +M+
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE 296
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN-TWISAYAKCNDLKMA 209
++ + VT+ + ++ + L KSVH I +DA++ T + YA +
Sbjct: 297 VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLC 356
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
E + I G R + WN++I ++++ + M GF PD ++ S LS+
Sbjct: 357 EKILHEI--GGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASG 414
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
L G +H H I F +D V N+LI+MYSKCG +D A +FD M + V+W +
Sbjct: 415 NEGELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNS 473
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
MISG +Q G +A+ LF M V +S+I C G LE GKW + + G
Sbjct: 474 MISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCG 533
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
++ + + AL+DMY+KCG + A+ +F + E++VVSW+++I+ ++G+ E + LF
Sbjct: 534 VRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFS 593
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M+E ++PN VT + VL AC+HAG +++G +FN M + + + P+ H+ C+ DLL R
Sbjct: 594 KMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRA 652
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L EA + ++ MP A IWG LL C+IH+ ++I + + L+ ++ Y ++
Sbjct: 653 GDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLS 712
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIYA GG W+ +R+MMK +KK P S+V + K F D
Sbjct: 713 NIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAGD 758
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 260/535 (48%), Gaps = 8/535 (1%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+ + S W ++ V +A+ L+ +M I+ N+ TFP + +AC+ D
Sbjct: 57 RTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLG 116
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
Q +HG I+KS F D V T ++ +Y + LD A K+F +MP RD+ SW+++I
Sbjct: 117 VGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVV 176
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ G + + L F M G D V V+ + +A L L KS H + + G++ D
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V ++ I YAKC L+ AE+VF + R+ +W ++I G ++L + M
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVT--YRSTSTWTAMISSYNLGGYLKEALALFVSMQK 294
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDID 310
P+ T+ +L SC L +G+ VH I D ++ + TL+ +Y+ D
Sbjct: 295 TEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHD 354
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ + R W +IS YAQKG L E + LF M+ G +PD ++ S +S G
Sbjct: 355 LCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASG 414
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G L+LG + D V N+LI+MYSKCG + A +F + K VV+W +
Sbjct: 415 NEGELQLGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNS 473
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKV 489
MI+G + NG +A+ LF M V F++V+QAC+H GFLEKG W + L+T
Sbjct: 474 MISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLIT-- 531
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
V + + + D+ + G L+ A +M +S W +L+ + +H I
Sbjct: 532 CGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVS-WSSLISSYGVHGQI 585
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L +H+ I + D I +Y++ DL+ + VFR W ++
Sbjct: 14 LRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHS--PDSFMWGVLL 71
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ + ++++ Y M+ + + T S+L +C L G+ VH I GFD
Sbjct: 72 KSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFD 131
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+D V L+S+Y + G +DSAR +F M R VSW+++IS + G+++E L F M
Sbjct: 132 MDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCM 191
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G PD V VL+++ CG+ G L L K Y G++++ V ++LI MY+KCGS+
Sbjct: 192 VSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSL 251
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A +F + ++ +WT MI+ L G EAL LF M + ++ PN VT +L++C
Sbjct: 252 RSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSC 311
Query: 471 THAGFLEKG 479
T+ L +G
Sbjct: 312 TNLSLLREG 320
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 187/405 (46%), Gaps = 3/405 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H HI+ + +D T +++ Y++ L + +F D W ++ G
Sbjct: 20 LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGC 79
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + L++ M IQA+ T + +A L + + VH I G D D V
Sbjct: 80 YQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTA 139
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+S Y + L A VF E LR +VSW+SII + ++ L+ +R M+ +G
Sbjct: 140 LLSVYGELGYLDSARKVFG--EMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGT 197
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD V++++ +C L + H + + G + D V ++LI MY+KCG + SA +
Sbjct: 198 PDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIV 257
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + R+ +WTAMIS Y G L EAL LF +M+ P+ VT+ ++ C L
Sbjct: 258 FENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLL 317
Query: 376 ELGKWFDNYACSGGLKDNV-MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
GK L N+ + L+++Y+ ++ + + + + W T+I+
Sbjct: 318 REGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISV 377
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A G E +DLF +M + P+ + + L A + G L+ G
Sbjct: 378 YAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLG 422
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 315/586 (53%), Gaps = 5/586 (0%)
Query: 31 DKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
+ E ++ L FR M P+++ + +AC +L ++ HG+I+K +D F
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
V ++++ MYAKC L A +F+ + R ++W AMI + G+L++ L LF +M+
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE 296
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN-TWISAYAKCNDLKMA 209
++ + VT+ + ++ + L KSVH I +DA++ T + YA +
Sbjct: 297 VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLC 356
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
E + I G R + WN++I ++++ + M GF PD ++ S LS+
Sbjct: 357 EKILHEI--GGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASG 414
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
L G +H H I F +D V N+LI+MYSKCG +D A +FD M + V+W +
Sbjct: 415 NEGELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNS 473
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
MISG +Q G +A+ LF M V +S+I C G LE GKW + + G
Sbjct: 474 MISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCG 533
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
++ + + AL+DMY+KCG + A+ +F + E++VVSW+++I+ ++G+ E + LF
Sbjct: 534 VRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFS 593
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M+E ++PN VT + VL AC+HAG +++G +FN M + + + P+ H+ C+ DLL R
Sbjct: 594 KMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRA 652
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L EA + ++ MP A IWG LL C+IH+ ++I + + L+ ++ Y ++
Sbjct: 653 GDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLS 712
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIYA GG W+ +R+MMK +KK P S+V + K F D
Sbjct: 713 NIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAGD 758
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 260/535 (48%), Gaps = 8/535 (1%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+ + S W ++ V +A+ L+ +M I+ N+ TFP + +AC+ D
Sbjct: 57 RTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLG 116
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
Q +HG I+KS F D V T ++ +Y + LD A K+F +MP RD+ SW+++I
Sbjct: 117 VGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVV 176
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ G + + L F M G D V V+ + +A L L KS H + + G++ D
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V ++ I YAKC L+ AE+VF + R+ +W ++I G ++L + M
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVT--YRSTSTWTAMISSYNLGGYLKEALALFVSMQK 294
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDID 310
P+ T+ +L SC L +G+ VH I D ++ + TL+ +Y+ D
Sbjct: 295 TEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHD 354
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ + R W +IS YAQKG L E + LF M+ G +PD ++ S +S G
Sbjct: 355 LCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASG 414
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G L+LG + D V N+LI+MYSKCG + A +F + K VV+W +
Sbjct: 415 NEGELQLGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNS 473
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKV 489
MI+G + NG +A+ LF M V F++V+QAC+H GFLEKG W + L+T
Sbjct: 474 MISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLIT-- 531
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
V + + + D+ + G L+ A +M +S W +L+ + +H I
Sbjct: 532 CGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVS-WSSLISSYGVHGQI 585
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L +H+ I + D I +Y++ DL+ + VFR W ++
Sbjct: 14 LRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHS--PDSFMWGVLL 71
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ + ++++ Y M+ + + T S+L +C L G+ VH I GFD
Sbjct: 72 KSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFD 131
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+D V L+S+Y + G +DSAR +F M R VSW+++IS + G+++E L F M
Sbjct: 132 MDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCM 191
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G PD V VL+++ CG+ G L L K Y G++++ V ++LI MY+KCGS+
Sbjct: 192 VSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSL 251
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A +F + ++ +WT MI+ L G EAL LF M + ++ PN VT +L++C
Sbjct: 252 RSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSC 311
Query: 471 THAGFLEKG 479
T+ L +G
Sbjct: 312 TNLSLLREG 320
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 187/405 (46%), Gaps = 3/405 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H HI+ + +D T +++ Y++ L + +F D W ++ G
Sbjct: 20 LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGC 79
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + L++ M IQA+ T + +A L + + VH I G D D V
Sbjct: 80 YQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTA 139
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+S Y + L A VF E LR +VSW+SII + ++ L+ +R M+ +G
Sbjct: 140 LLSVYGELGYLDSARKVFG--EMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGT 197
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD V++++ +C L + H + + G + D V ++LI MY+KCG + SA +
Sbjct: 198 PDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIV 257
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + R+ +WTAMIS Y G L EAL LF +M+ P+ VT+ ++ C L
Sbjct: 258 FENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLL 317
Query: 376 ELGKWFDNYACSGGLKDNV-MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
GK L N+ + L+++Y+ ++ + + + + W T+I+
Sbjct: 318 REGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISV 377
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
A G E +DLF +M + P+ + + L A + G L+ G
Sbjct: 378 YAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLG 422
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/595 (32%), Positives = 312/595 (52%), Gaps = 6/595 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + V + LF RM+ + PN TF + A A + +H V
Sbjct: 169 WTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSV 228
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S +FV ++++MY+KC ++ A +F +M RD+ SWN ++ G + L
Sbjct: 229 KFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQ 288
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF++ R + T + + + K L+L + +HS + G +D +V + AY+
Sbjct: 289 LFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYS 348
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L A +F + G + VVSW ++IGGC + + M D +P+ T
Sbjct: 349 KCGELDDAFNIFL-LMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTY 407
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++L++ + P L Q +H+ I + SV L++ YSK G+ + A +F +
Sbjct: 408 STVLTASI-PILLPQ---IHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDH 463
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA-LELGKW 380
+ V+W+AM+S Y+Q GD D A +F M G P+ T+ S I C A ++ G+
Sbjct: 464 KDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQ 523
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
F + +D + V +AL+ MY++ GSI AR +F ++ +VSW +MI+G A +G
Sbjct: 524 FHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGY 583
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EALD F QM + + + TFLAV+ CTHAG +++G YF+ M + ++P + HYS
Sbjct: 584 SKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYS 643
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DL R GKL E ++ ++ MP + A +W TLL AC++H+N+E+G+ A +L LEP
Sbjct: 644 CMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPD 703
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++NIYA GRW +R +M +VKK G S + I K +F D
Sbjct: 704 DSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACD 758
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/584 (25%), Positives = 261/584 (44%), Gaps = 56/584 (9%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
+ K C + D + + +H VK F +++ V T +VDMY KC ++ +F+ MP R
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+V +W +++ G+ Q V+ LF+ MR G+ + T + A + L + VH
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ + G + V VCN+ I+ Y+KC ++ A+ VFR +E R +VSWN+++ G +
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMET--RDMVSWNTLMAGLLLNEH 282
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
++L + + +T +++ C + L R +HS + +GF D +V+
Sbjct: 283 QLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTA 342
Query: 299 LISMYSKCGDIDSARFLFDGMC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
++ YSKCG++D A +F M + VSWTAMI G Q D+ A LF M P
Sbjct: 343 IMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKP 402
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+ T ++++ + L + V AL+ YSK G+ +A +F
Sbjct: 403 NEFTYSTVLT----ASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIF 458
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC-THAGFL 476
+ K VV+W+ M++ + G+ A ++F +M ++PN T + + AC + +
Sbjct: 459 KMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGI 518
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL------------------------ 512
++G + + K Y+ + S + + RKG +
Sbjct: 519 DQGRQFHAISIK-YRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISG 577
Query: 513 -------KEALDFVQSMP---IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
KEALD + M I+ D + ++ C H + + E Y + H+
Sbjct: 578 YAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGC-THAGL-VKEGQQYFDSMVMDHNI 635
Query: 563 APYVE----MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+P +E M ++Y+ G+ D NL M FP ++V
Sbjct: 636 SPTMEHYSCMVDLYSRAGKLDETMNLIEGM------PFPAGAMV 673
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 178/374 (47%), Gaps = 20/374 (5%)
Query: 108 AYKLFDKMPDRDVASWNA----MIVGFAQMGFLE-KVLCLFYNMRLVG-IQADFVT---- 157
A + D MP RD A+ ++ IV + + G + L F ++ G +Q V+
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVSRVLK 107
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISAYAKCNDLKMAELVFRGI 216
V GL + + L H + G D A+V V + Y KC ++ +VF G+
Sbjct: 108 VCGLIPDRVSGEQL------HCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ R VV+W S++ G G D + + M +G P+ T S+LS+ A+
Sbjct: 162 PK--RNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDL 219
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR VH+ + +G V V N+LI+MYSKCG ++ A+ +F M R VSW +++G
Sbjct: 220 GRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLL 279
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
EAL+LF A+ T ++I C L L + + G + V
Sbjct: 280 NEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNV 339
Query: 397 CNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
A++D YSKCG + DA +F +P + VVSWT MI GC N + A LF +M E +
Sbjct: 340 MTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDN 399
Query: 456 LRPNRVTFLAVLQA 469
++PN T+ VL A
Sbjct: 400 VKPNEFTYSTVLTA 413
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 151/303 (49%), Gaps = 2/303 (0%)
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD-LDVSVINTLISMYSKCGDIDSAR 313
R V +L C V G +H + GFD +V V L+ MY KCG ++ R
Sbjct: 96 RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGR 155
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F+GM R V+WT++++GY Q + + LFF M A G P+ T S++S G
Sbjct: 156 VVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQG 215
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
A++LG+ + G + V VCN+LI+MYSKCG + +A+ +F + + +VSW T++A
Sbjct: 216 AVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMA 275
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G LN +EAL LFH + ++ T+ V++ C + L + + K + +
Sbjct: 276 GLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLK-HGFH 334
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
+ N + + D + G+L +A + MP + W ++ C + +I + + R
Sbjct: 335 SDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSR 394
Query: 554 LFE 556
+ E
Sbjct: 395 MRE 397
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 26/315 (8%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W + I + + A LF RM++++++PN T+ + A + L Q
Sbjct: 366 SQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI---LLPQ- 421
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH I+K+ + V T ++ Y+K + A +F + +DV +W+AM+ ++Q G
Sbjct: 422 IHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGD 481
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ +F M + G++ + T+ A A + + H+ I + V +
Sbjct: 482 CDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGS 541
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
++ YA+ + A +VF + R +VSWNS+I G ++L+ +R M G
Sbjct: 542 ALVTMYARKGSIDSARIVFE--RQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGI 599
Query: 255 RPDVTTVVSLLSSCVCPEALVQGR-----LVHSHGI-----HYGFDLDVSVINTLISMYS 304
D T ++++ C + +G+ +V H I HY + ++ +YS
Sbjct: 600 EMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHY---------SCMVDLYS 650
Query: 305 KCGDIDSARFLFDGM 319
+ G +D L +GM
Sbjct: 651 RAGKLDETMNLIEGM 665
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 314/602 (52%), Gaps = 40/602 (6%)
Query: 47 KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLD 106
K+ P + + A +KL + Y++ H+ + F TM+ Y+K L
Sbjct: 33 KSLTNPETFLYNNLINAYSKLGNITYAR----HVFDKMPQPNSFSWNTMLSAYSKSGDLS 88
Query: 107 CAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI----QADFVTVMGLT 162
++F MP+RD SWN++I G+ G + + + + +M G+ + F T++ L
Sbjct: 89 TMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLV 148
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE---- 218
+ + L + +H + G A V V ++ + YAK + +A VF ++E
Sbjct: 149 SS---QGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVV 205
Query: 219 -------GL------------------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
GL R +SW ++I G ++++ +R M +G
Sbjct: 206 MYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEG 265
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D T S+L++C AL +G+ +H+ I G++ +V V + L+ MY KC + A
Sbjct: 266 MAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAE 325
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F M ++ VSWTAM+ GY Q G +EA+R+F M+ G PD T+ S+IS C
Sbjct: 326 AVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLA 385
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+LE G F A GL + V NALI +Y KCGSI D+ +LF + + VSWT +++
Sbjct: 386 SLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVS 445
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A G+ E +DLF +M+ L+P+ VTF+AVL AC+ AG +E+G YF M K + +
Sbjct: 446 GYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGII 505
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P +HY+CM DL GR G+L+EA +F+ MP D+ W TLL +C+++ N EIG++ A
Sbjct: 506 PFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAES 565
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
L EL+P + A Y+ +++IYA G+W VA LR M+ +K PG S + K F+
Sbjct: 566 LLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSA 625
Query: 614 ED 615
+D
Sbjct: 626 DD 627
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 218/457 (47%), Gaps = 46/457 (10%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDI-EPNNLTFPFI-----AKACAKLSDFLYSQM 75
WNS I V +A+ + M K+ + N +TF + ++ C L +
Sbjct: 105 WNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLG-----RQ 159
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--------------------- 114
IHG IVK F + +FV +++VDMYAK + A ++FD+
Sbjct: 160 IHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGM 219
Query: 115 ----------MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
M +RD SW MI G Q G + + LF +MR G+ D T + A
Sbjct: 220 VKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTA 279
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ L K +H+ I G + +V V + + Y KC ++ AE VF+ + + VV
Sbjct: 280 CGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMAN--KNVV 337
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SW +++ G ++++ + M +G PD T+ S++SSC +L +G H
Sbjct: 338 SWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQA 397
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ G ++V N LI++Y KCG I+ + LFD M R VSWTA++SGYAQ G +E +
Sbjct: 398 LVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETI 457
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDM 403
LF M G PD VT ++++S C ++G +E G ++F++ G+ +ID+
Sbjct: 458 DLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDL 517
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
+ + G + +A+ +P + W T+++ C L G
Sbjct: 518 FGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 166/364 (45%), Gaps = 45/364 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + +A+ LFR M++ + + TF + AC L + IH I+
Sbjct: 238 WTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLII 297
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + ++FV + +VDMY KC + A +F +M +++V SW AM+VG+ Q GF E+ +
Sbjct: 298 RSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVR 357
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F +M+ GI+ D T+ + + + L H + G+ + ++V N I+ Y
Sbjct: 358 VFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYG 417
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ + +F E R VSW +++ G K +++++ + M+ G +PD T
Sbjct: 418 KCGSIEDSNQLFD--EMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTF 475
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+++LS+C S+ G ++ + F+ M
Sbjct: 476 IAVLSAC-----------------------------------SRAGLVERGQQYFESMLK 500
Query: 322 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ +T MI + + G L+EA M + PD + +++S C G E
Sbjct: 501 DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFS---PDSIGWATLLSSCRLYGNEE 557
Query: 377 LGKW 380
+GKW
Sbjct: 558 IGKW 561
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 112/275 (40%), Gaps = 63/275 (22%)
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C Q + +H I + + + N LI+ YSK G+I AR +FD M SW
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 328 TAMISGYAQKGDLD-------------------------------EALRLFFAMEAAGEV 356
M+S Y++ GDL EA++ + +M G +
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 357 P-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK--------- 406
+ +T +M+ G ++LG+ G V V ++L+DMY+K
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 407 ----------------------CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
G + D++ LF+ + E+ +SWTTMI G NG EA
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+DLF M + + ++ TF +VL AC L++G
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEG 289
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 325/596 (54%), Gaps = 14/596 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I D N+ AL RMK + + T+ C FL + +V
Sbjct: 145 WNT-ILSGFDDNQI--ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG-FLEKVL 140
K+ SD+ V + + MY++ A ++FD+M +D+ SWN+++ G +Q G F + +
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M G++ D V+ + H L L + +H I G ++ + V N +S Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC L+ + VF + E R VVSW ++I DD+++ + +M +DG P+ T
Sbjct: 322 SKCGVLEAVKSVFHQMSE--RNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVT 374
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V L+++ C E + +G +H I GF + SV N+ I++Y+K ++ A+ F+ +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG--QSGALELG 378
R +SW AMISG+AQ G EAL++F + AA +P+ T S+++ + +++ G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + GL +V +AL+DMY+K G+I ++ ++F + +K WT++I+ + +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+F ++LFH+M++ ++ P+ VTFL+VL AC G ++KG+ FN+M +VY + P H
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
YSCM D+LGR G+LKEA + + +P + ++L +C++H N+++G VA E++
Sbjct: 614 YSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK 673
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
P + YV+M NIYA WD A +R M++ V K G S + + + T++
Sbjct: 674 PELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQ 729
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/530 (26%), Positives = 247/530 (46%), Gaps = 23/530 (4%)
Query: 23 NSQIREAVDKNEAHKALLLFR---RMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
N I E++ +N +AL +F+ ++ + +T KAC D IHG
Sbjct: 44 NHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGF 101
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
S F S + V ++ MY K R D A +F+ + D DV SWN ++ GF +
Sbjct: 102 STTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIA 158
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L M+ G+ D T + ++ L + S + G+++D+ V N++I+
Sbjct: 159 LNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITM 218
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRPDV 258
Y++ + A VF E + ++SWNS++ G + F +++ +R M+ +G D
Sbjct: 219 YSRSGSFRGARRVFD--EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDH 276
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+ S++++C L R +H I G++ + V N L+S YSKCG +++ + +F
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M +R VSWT MIS + D+A+ +F M G P+ VT + +I+ + ++ G
Sbjct: 337 MSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
G V N+ I +Y+K ++ DA++ F + + ++SW MI+G A N
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG---YFNLMTKVYQVNPE 495
G EAL +F + PN TF +VL A A + G + +L+ P
Sbjct: 452 GFSHEALKMFLSAAA-ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 510
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ S + D+ ++G + E+ M K+ +W +++ A H + E
Sbjct: 511 VS--SALLDMYAKRGNIDESEKVFNEMSQKNQF-VWTSIISAYSSHGDFE 557
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 313/586 (53%), Gaps = 15/586 (2%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF-LYSQMIHGHIVKSPFW-SDIFVQTT 94
+AL LF + + PN T +AC F L + G + K FW +D+ V
Sbjct: 135 EALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCA 194
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++DM+AK L ++FD + +R V W +I +AQ G+ ++ + LF +M G Q D
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPD 254
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND---LKMAEL 211
T+ + A L + +HS + +G+++D V + YAK ++ L A
Sbjct: 255 QYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNARE 314
Query: 212 VFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
VF + + V++W +++ G G + + + + M+ +G RP+ T S+L +C
Sbjct: 315 VFNRMPK--HNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACAN 372
Query: 271 PEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
GR +H+H + DL+V V N L+SMY++ G I+ AR FD + ++ VS++
Sbjct: 373 LGDQDSGRQIHTHCVKSNLADLNV-VGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSG 431
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+ G + + + +E T S+IS G L G+ + G
Sbjct: 432 NLDGDGRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAG 486
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ + N+L+ MYS+CG + DA ++F + + V+SWT+MI+G A +G AL+LFH
Sbjct: 487 FGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFH 546
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
M+ ++PN VT++AVL AC+HAG +++G +F +M K + + P + HY+CM DLLGR
Sbjct: 547 DMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRS 606
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G +++ALDF+ MP + DA +W TLL ACK H N++IGE A + +LEP APYV ++
Sbjct: 607 GLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLS 666
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
N+YA G WD VA +R++M+ + K G S +H++ F D
Sbjct: 667 NLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGD 712
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 209/424 (49%), Gaps = 23/424 (5%)
Query: 69 DFLYSQMIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVASWN 124
D + + GH+++ S +D V +++ +Y+KC + A +FD MP RD+ SW
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK--HL---SLLKSVHS 179
AM ++ G + L LF G+ + T+ TQA ++ HL ++L V
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
G DVSV I +AK DL VF G+ E RTVV W +I
Sbjct: 182 LGF---WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFE--RTVVVWTLLITRYAQSGYS 236
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D+++ + M+ +GF+PD T+ S+LS+C + G+ +HS + G + D V L
Sbjct: 237 DEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGL 296
Query: 300 ISMYSKCGD---IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGE 355
+ MY+K + + +AR +F+ M ++WTA++SGY Q+G D + + LF M G
Sbjct: 297 VDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGI 356
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ +T SM+ C G + G+ + L D +V NAL+ MY++ GSI +AR
Sbjct: 357 RPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARH 416
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
F L EK +VS++ + G + + + +Q+ ++L + TF +++ A G
Sbjct: 417 AFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGM 471
Query: 476 LEKG 479
L KG
Sbjct: 472 LTKG 475
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 209/427 (48%), Gaps = 19/427 (4%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W I + +A+ LF M +N +P+ T + AC +L F Q +H
Sbjct: 219 TVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLH 278
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKC---DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++ SD V +VDMYAK L A ++F++MP +V +W A++ G+ Q G
Sbjct: 279 SLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRG 338
Query: 135 FLE-KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ +V+ LF M GI+ + +T + +A + + +H+ + + AD++V
Sbjct: 339 SQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNL-ADLNVV 397
Query: 194 -NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N +S YA+ ++ A F + E + +VS++ + G D N Y+ +
Sbjct: 398 GNALVSMYAESGSIEEARHAFDQLYE--KNMVSFSGNLDG-------DGRSNTYQDYQIE 448
Query: 253 GFRPDVTTVV--SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
++T SL+S+ L +G+ +H+ + GF D ++ N+L+SMYS+CG +
Sbjct: 449 RMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLV 508
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
A +FD M D +SWT+MISG A+ G AL LF M AAG P+ VT ++++S C
Sbjct: 509 DACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACS 568
Query: 371 QSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSW 428
+G ++ GK F GL + ++D+ + G + DA + +P + + W
Sbjct: 569 HAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVW 628
Query: 429 TTMIAGC 435
T++ C
Sbjct: 629 KTLLGAC 635
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 149/326 (45%), Gaps = 16/326 (4%)
Query: 22 WNSQIREAVDK-NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + + V + ++ ++ ++LF +M I PN++T+ + KACA L D + IH H
Sbjct: 327 WTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHC 386
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VKS V +V MYA+ ++ A FD++ ++++ S++ + G + +
Sbjct: 387 VKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-- 444
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
Y + + + T L AA L+ + +H+ + G +D ++ N+ +S Y
Sbjct: 445 ---YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMY 501
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++C L A VF + + V+SW S+I G +L + MI G +P+ T
Sbjct: 502 SRCGYLVDACQVFDEMND--HNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVT 559
Query: 261 VVSLLSSCVCPEALVQG----RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFL 315
+++LS+C + +G R++ H+G + ++ + + G ++ A F+
Sbjct: 560 YIAVLSACSHAGLVKEGKEHFRMMQK---HHGLIPRMEHYACMVDLLGRSGLVEDALDFI 616
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLD 341
+ C + W ++ ++D
Sbjct: 617 NEMPCQVDALVWKTLLGACKTHNNMD 642
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 278/514 (54%), Gaps = 5/514 (0%)
Query: 105 LDCAYKLFD--KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGL 161
L A +LF P R S+N +I F + G E L LF M + D TV
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
++ LS+ + V ++ G D V N+ I YA C D+ A ++F ++ ++
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQ--VK 235
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
V++WN++I G + + + ++ M+ D T++S+ ++C G+ +
Sbjct: 236 GVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIA 295
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ G ++ L+ MY+KCG++D AR LFD M R V+W+AMISGY Q
Sbjct: 296 EYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCR 355
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EAL +F M+ P+ VT++S++S C GALE GKW +Y L V++ AL+
Sbjct: 356 EALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALV 415
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
D Y+KCG I DA + F ++P + +WT +I G A NG EAL+LF M+E ++ P V
Sbjct: 416 DFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDV 475
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TF+ VL AC+H +E+G +F MT+ Y + P + HY CM DLLGR G + EA F+++
Sbjct: 476 TFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRN 535
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MPI+ +A +W LL AC +H+N+EIGE ++ L+P + Y+ ++N YA G+W
Sbjct: 536 MPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNA 595
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A +R MK V+K PG SL+ + G F ED
Sbjct: 596 AMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAED 629
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 207/452 (45%), Gaps = 13/452 (2%)
Query: 7 PPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACA 65
PPR + Y N IR + AL LF M + + P+ T K+C+
Sbjct: 131 PPRSARSY--------NILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCS 182
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
++ D + + + K F D FV +++ MYA C + A+ LF + + V +WNA
Sbjct: 183 RMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNA 242
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MI G+ + G ++V+ +F M V D VT++ + A +L + + + G
Sbjct: 243 MIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKG 302
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+ ++ + YAKC +L A +F + R VV+W+++I G T D+ ++L
Sbjct: 303 MLRSRNLATALVDMYAKCGELDKARRLFDRMHS--RDVVAWSAMISGYTQSDRCREALAI 360
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M P+ T+VS+LS+C AL G+ VHS+ L V + L+ Y+K
Sbjct: 361 FNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAK 420
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG I A F+ M R +WTA+I G A G EAL LF +M A P VT + +
Sbjct: 421 CGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGV 480
Query: 366 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 423
+ C +E G + F + G+ + ++D+ + G I +A + +P E
Sbjct: 481 LLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEP 540
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V W +++ C ++ + Q++ LD
Sbjct: 541 NAVVWRALLSACTVHKNVEIGEEALKQIVPLD 572
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 303/601 (50%), Gaps = 9/601 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I H+ + LF+ + +D+ + TF C + D ++IH I
Sbjct: 88 WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 147
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S + + +++DMY KC R+D A +F+ + D SWN++I G+ ++G +++L
Sbjct: 148 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 207
Query: 142 LFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L M G+ + + +A + + + K +H + +G+D DV V +
Sbjct: 208 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDT 267
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC----TYGDKF-DDSLNFYRHMIYDGF 254
YAK DL+ A +F+ + + VV +N++I G T D+F ++++ + M G
Sbjct: 268 YAKIGDLEDATKIFKLMPD--PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 325
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+P T S+L +C EA G+ +H+ Y D + N L+ +YS G I+
Sbjct: 326 KPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLK 385
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F VSWT++I G+ Q G + L LF + +G PD T+ M+S C A
Sbjct: 386 CFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAA 445
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
++ G+ YA G+ + ++ N+ I MY+KCG I A F +VSW+ MI+
Sbjct: 446 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 505
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A +G EA+DLF M + PN +TFL VL AC+H G +E+G YF +M K + + P
Sbjct: 506 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 565
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ H +C+ DLLGR G+L EA F+ + D +W +LL AC++H+ + G+ VA R+
Sbjct: 566 NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERV 625
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
ELEP +AA YV + NIY G +R +MK VKK PG S + + +F
Sbjct: 626 IELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAG 685
Query: 615 D 615
D
Sbjct: 686 D 686
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 269/579 (46%), Gaps = 49/579 (8%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+++T+ + + + ++ ++ H H++K+ F +F+ ++ MY KC D A KLF
Sbjct: 18 DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D+MP R+V SWN++I G+ QMGF +V+ LF R+ ++ D T L
Sbjct: 78 DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L + +H+ G+ V + N+ I Y KC + A LVF +E VSWNS+I G
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADE--LDSVSWNSLIAG 195
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC--PEALVQGRLVHSHGIHYGFD 290
D+ L M+ G + + S L +C ++ G+++H + G D
Sbjct: 196 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 255
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL-----DEALR 345
LDV V L+ Y+K GD++ A +F M D V + AMI+G+ Q + +EA+
Sbjct: 256 LDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 315
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LFF M++ G P T S++ C A E GK L+ + + NAL+++YS
Sbjct: 316 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS 375
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
GSI D + F++ P+ VVSWT++I G NG+F L LFH+++ +P+ T
Sbjct: 376 LSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 435
Query: 466 VLQACT-----------HAGFLEKGWGYFNL-------------------MTKVYQVNPE 495
+L AC HA ++ G G F + MT NP+
Sbjct: 436 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPD 495
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+ +S M + G KEA+D + M I + + +L AC +E G
Sbjct: 496 IVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG----L 551
Query: 553 RLFEL--EPHSAAPYVE-MANIYALGGRWDGVANLRTMM 588
R FE+ + H P V+ A I L GR +A + +
Sbjct: 552 RYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFI 590
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 191/396 (48%), Gaps = 15/396 (3%)
Query: 149 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKM 208
+G+ D VT L Q + L K H I + + N + Y KC + +
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72
Query: 209 AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
A+ +F + + R VVSWNS+I G T + + +N ++ R D T + LS C
Sbjct: 73 AKKLFDRMPK--RNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVC 130
Query: 269 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
L GRL+H+ G V + N+LI MY KCG ID AR +F+ + VSW
Sbjct: 131 GRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWN 190
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ--SGALELGKWFDNYAC 386
++I+GY + G DE LRL M G + + S + CG S ++E GK A
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC----ALNGEFV 442
GL +V+V AL+D Y+K G + DA ++F +P+ VV + MIAG + EF
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFA 310
Query: 443 -EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY-- 499
EA+ LF +M ++P+ TF ++L+AC+ E G + ++++ N + + +
Sbjct: 311 NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGK---QIHAQIFKYNLQSDEFIG 367
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + +L G +++ L S P K D W +L+
Sbjct: 368 NALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLI 402
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 109/220 (49%)
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
Y G D T L+ +L+ G+L H H I F + ++N L+ MY KCG+ D
Sbjct: 12 YLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETD 71
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
A+ LFD M R VSW ++ISGY Q G E + LF + D T + +S CG
Sbjct: 72 VAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG 131
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
++ L LG+ GL V++ N+LIDMY KCG I AR +F + E VSW +
Sbjct: 132 RTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+IAG G E L L +M+ L N + L+AC
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKAC 231
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/603 (30%), Positives = 320/603 (53%), Gaps = 10/603 (1%)
Query: 6 LPPRLNKIYRSST---INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
P +++ S++ + WN+ I+ V+ + ++A+ +F+ M+ + +P+ T I
Sbjct: 317 FPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIIS 375
Query: 63 ACAKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
AC + +HG+I+K + + V +++D+Y KC+ A LF MP RD+
Sbjct: 376 ACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLI 435
Query: 122 SWNAMIVGFAQMGFL-EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SWN MI G+++ L E+ +F + G+ TV+ + + + L+ KSVHSF
Sbjct: 436 SWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSF 495
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ G VS N+ I Y C D A + I + ++SWN+ I GC +
Sbjct: 496 ILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITP-ISDIISWNTAIVGCVQNGLYG 554
Query: 241 DSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D+L ++ M PD T+VS+LS C + G+ +H + + ++ V N L
Sbjct: 555 DALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNAL 614
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
++MY + GD +SA +F + R SW MISG+AQ + A + + ME P+
Sbjct: 615 LTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKMEDFE--PNE 672
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
++++ +I C Q G L GK + GL+ NV + +L+DMYSKCG + + +F +
Sbjct: 673 ISIVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFES 732
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EK++ W +MI+ +G ++++++F +M ++ R TF+A+L AC+H+G ++G
Sbjct: 733 SAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEG 792
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
Y++LM + + + P H+ C+ D+LGR G+L+EA FV+S+P K G+WG LL AC
Sbjct: 793 LKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACS 852
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
+++ E VA L LEP ++ YV M+N+YA W G +R +++ + K G+
Sbjct: 853 KKSELKMCESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGR 912
Query: 600 SLV 602
S++
Sbjct: 913 SII 915
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 224/455 (49%), Gaps = 9/455 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I A++LFR M ++ + + ++ + HG +
Sbjct: 132 WNAAISALTLNCRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMAL 191
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K +D+ + T++DMYAKC + +F +MP RD SWN+M+ G G E
Sbjct: 192 KRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAY 251
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGV-DADVSVCNTWISA 199
F M QAD V++ + A H K L S +SVHS I +G D SV N+ I+
Sbjct: 252 YFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITF 311
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y + + AE VF + + +V+WN++I G D+ ++++ ++ M +PDV
Sbjct: 312 YYELGFPEAAEEVF--LSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVA 368
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDG 318
T+V+++S+C L +G+ VH + I G + SV N+L+ +Y KC D +AR LF
Sbjct: 369 TLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRT 428
Query: 319 MCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M R +SW MISGY++ L +EA +F + + G L TV+++I C L
Sbjct: 429 MPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNF 488
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCA 436
GK ++ G V N+LI MY CG A L ++ P ++SW T I GC
Sbjct: 489 GKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCV 548
Query: 437 LNGEFVEALDLFHQMME-LDLRPNRVTFLAVLQAC 470
NG + +AL+ F M L L P+ +T ++VL C
Sbjct: 549 QNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVC 583
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 226/478 (47%), Gaps = 30/478 (6%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H +KS D V+T+++ Y++ + A ++FD+ D+ WNA I
Sbjct: 85 LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ LF M V D +++ + A A+ L + H + +D D+S+ NT
Sbjct: 145 YGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNT 204
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC D +E+VF+ + R SWNS++ G + + S +++ M+ F+
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMP--YRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262
Query: 256 PDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSAR 313
D ++ +LS+C + L G VHS I G+ D SV N+LI+ Y + G ++A
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAE 322
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F ++ V+W AMI G + ++EA+ +F M + + PD+ T++++IS CG G
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQ-PDVATLVTIISACGDHG 381
Query: 374 ALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L GK Y G + + V N+L+D+Y KC AR LF +P + ++SW TMI
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441
Query: 433 AGCALNGEF-VEALDLFHQMMELDLRPNRVTFLAVLQAC-----------THAGFLEKGW 480
+G + N EA +F ++ L T +AV+ +C H+ L+ G+
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGF 501
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+T V N ++ Y C D L A ++S+ SD W T + C
Sbjct: 502 -----LTGVSAANSLIHMYICCGDSLA-------AFSLLESITPISDIISWNTAIVGC 547
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V ++I YS+ + A ++F ++ W I+ LN + +A+ LF M+++
Sbjct: 100 VRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVL 159
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ + + +L + A LE G + + K ++ +L+ ++ + D+ + G +
Sbjct: 160 GVIDSTSMVIMLSGASRARSLEHGIAFHGMALK-RCLDTDLSLWNTLMDMYAKCGDFYSS 218
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Q MP + D W +++ + EI Y
Sbjct: 219 EVVFQRMPYR-DTTSWNSMVSGSLFNGLAEISAY 251
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 325/596 (54%), Gaps = 14/596 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I D N+ AL RMK + + T+ C FL + +V
Sbjct: 70 WNT-ILSGFDDNQI--ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 126
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG-FLEKVL 140
K+ SD+ V + + MY++ A ++FD+M +D+ SWN+++ G +Q G F + +
Sbjct: 127 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 186
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M G++ D V+ + H L L + +H I G ++ + V N +S Y
Sbjct: 187 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 246
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC L+ + VF + E R VVSW ++I DD+++ + +M +DG P+ T
Sbjct: 247 SKCGVLEAVKSVFHQMSE--RNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVT 299
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V L+++ C E + +G +H I GF + SV N+ I++Y+K ++ A+ F+ +
Sbjct: 300 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 359
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG--QSGALELG 378
R +SW AMISG+AQ G EAL++F + AA +P+ T S+++ + +++ G
Sbjct: 360 FREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQG 418
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + GL +V +AL+DMY+K G+I ++ ++F + +K WT++I+ + +
Sbjct: 419 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 478
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+F ++LFH+M++ ++ P+ VTFL+VL AC G ++KG+ FN+M +VY + P H
Sbjct: 479 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 538
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
YSCM D+LGR G+LKEA + + +P + ++L +C++H N+++G VA E++
Sbjct: 539 YSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK 598
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
P + YV+M NIYA WD A +R M++ V K G S + + + T++
Sbjct: 599 PELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQ 654
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 232/497 (46%), Gaps = 20/497 (4%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+ +T KAC D IHG S F S + V ++ MY K R D A +F
Sbjct: 2 DEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 59
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
+ + D DV SWN ++ GF + L M+ G+ D T + ++
Sbjct: 60 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 116
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L + S + G+++D+ V N++I+ Y++ + A VF E + ++SWNS++ G
Sbjct: 117 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD--EMSFKDMISWNSLLSG 174
Query: 233 CTYGDKFD-DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ F +++ +R M+ +G D + S++++C L R +H I G++
Sbjct: 175 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 234
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+ V N L+S YSKCG +++ + +F M +R VSWT MIS + D+A+ +F M
Sbjct: 235 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMR 289
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G P+ VT + +I+ + ++ G G V N+ I +Y+K ++
Sbjct: 290 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE 349
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
DA++ F + + ++SW MI+G A NG EAL +F + PN TF +VL A
Sbjct: 350 DAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAA-ETMPNEYTFGSVLNAIA 408
Query: 472 HAGFLEKGWG---YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
A + G + +L+ P ++ S + D+ ++G + E+ M K+
Sbjct: 409 FAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMSQKNQF 466
Query: 529 GIWGTLLCACKIHRNIE 545
+W +++ A H + E
Sbjct: 467 -VWTSIISAYSSHGDFE 482
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 308/576 (53%), Gaps = 34/576 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVD---MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+MIH ++K+ + + + +++ + D L A +F+ + + ++ WN M G
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A L L+ M +G+ + T L ++ +K + +H + +G D D+
Sbjct: 67 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126
Query: 191 SVCNTWISAYAKCNDLKMAELVF--------------------RGIEEG---------LR 221
V + IS Y + L+ A VF RG E ++
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSWN++I G + ++L ++ M+ RPD +T+V+++S+C ++ GR VH
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 246
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S +GF ++ ++N LI +YSKCG++++A LF+G+ + +SW +I GY
Sbjct: 247 SWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYK 306
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNA 399
EAL LF M +GE P+ VT+LS++ C GA+++G+W Y G+ + + +
Sbjct: 307 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY+KCG I A ++F ++ K++ SW MI G A++G + D+F +M + + P+
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPD 426
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TF+ +L AC+H+G L+ G F MT+ Y++ P+L HY CM DLLG G KEA + +
Sbjct: 427 DITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 486
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
+M ++ D IW +LL ACK+H N+E+GE A L ++EP + YV ++NIYA GRW+
Sbjct: 487 NTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWN 546
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VAN R ++ +KK PG S + I+ F + D
Sbjct: 547 EVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 582
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 235/464 (50%), Gaps = 38/464 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R ++ AL L+ M + PN+ TFPF+ K+CAK F Q IHGH++
Sbjct: 59 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 118
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR----------------------- 118
K D++V T+++ MY + RL+ A+K+FD+ P R
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQK 178
Query: 119 --------DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
DV SWNAMI G+A+ G ++ L LF +M ++ D T++ + A +
Sbjct: 179 MFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 238
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G +++ + N I Y+KC +L+ A +F G+ + V+SWN++I
Sbjct: 239 IELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLP--YKDVISWNTLI 296
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 297 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 356
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S+ +LI MY+KCGDI++A +F+ + ++ SW AMI G+A G D + +F
Sbjct: 357 VANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFS 416
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 417 RMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHS 476
Query: 408 GSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
G +A E+ + E V W +++ C ++G VE + F Q
Sbjct: 477 GLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN-VELGESFAQ 519
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 307/597 (51%), Gaps = 73/597 (12%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHI---VKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
N+ ++ + C + +D + ++ + H+ + P +D F+Q ++ +YAK L A
Sbjct: 21 NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQP--TDTFLQNRLLHLYAKSGNLSDAR 78
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF----------YNMRLVGIQAD----- 154
LFDKM RDV SWNAM+ +++ G +E + +F YN + G +
Sbjct: 79 DLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQ 138
Query: 155 ----FVTVMGLTQAAIHAKHLSLL------------KSVHSFGIHIGVDADVSVCNTWIS 198
FV + + H+S+L K +H + + V V N +
Sbjct: 139 ALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTN 198
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC L A +F + + VVSWNS+I G + + + M G PD
Sbjct: 199 MYAKCGALDQARWLFDRMVN--KNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQ 256
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ ++LS+ Y +CG ID A F
Sbjct: 257 VTISNILSA-----------------------------------YFQCGYIDEACKTFRE 281
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ ++ +V WT M+ G AQ G ++AL LF M PD T+ S++S C + +L G
Sbjct: 282 IKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQG 341
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ A G+ +++V +AL+DMYSKCG DA +F + + V+SW +MI G A N
Sbjct: 342 QAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQN 401
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+ +EAL L+ +M+ +L+P+ +TF+ VL AC HAG +E+G GYF ++K++ +NP +H
Sbjct: 402 GKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDH 461
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
YSCM +LLGR G + +A+D ++SM + + IW TLL C+I+ ++ GE A LFEL+
Sbjct: 462 YSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELD 521
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
PH+A PY+ ++NIYA GRW VA +R++MK N++KKF S + I+ + F ED
Sbjct: 522 PHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAED 578
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 208/423 (49%), Gaps = 39/423 (9%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+ +AL F RM++ E + T + AC++L D + IHG IV + +FV
Sbjct: 136 SSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNA 195
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
+ +MYAKC LD A LFD+M +++V SWN+MI G+ Q G E LF M+ G+ D
Sbjct: 196 LTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPD 255
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
VT+ + +SAY +C + A FR
Sbjct: 256 QVTISNI-----------------------------------LSAYFQCGYIDEACKTFR 280
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I+E + V W +++ GC K +D+L +R M+ + RPD T+ S++SSC +L
Sbjct: 281 EIKE--KDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASL 338
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
QG+ VH + +G D D+ V + L+ MYSKCG+ A +F M R +SW +MI GY
Sbjct: 339 CQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGY 398
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDN 393
AQ G EAL L+ M PD +T + ++S C +G +E G+ +F + + G+
Sbjct: 399 AQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPT 458
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+ +I++ + G + A +L ++ E + W+T+++ C +N + +
Sbjct: 459 FDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLF 518
Query: 453 ELD 455
ELD
Sbjct: 519 ELD 521
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + + ALLLFR M ++ P+N T + +CA+L+ Q +HG V
Sbjct: 290 WTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAV 349
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D+ V + +VDMY+KC A+ +F +M R+V SWN+MI+G+AQ G + L
Sbjct: 350 IFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALA 409
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
L+ M ++ D +T +G+ A +HA
Sbjct: 410 LYEEMLHENLKPDNITFVGVLSACMHA 436
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 304/564 (53%), Gaps = 14/564 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C + ++ +HGH+ K+ +D+FV T++V+ Y +C A +LFD MP+R+V +W
Sbjct: 88 CVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTW 147
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
A++ G+ L +F M +G T+ A + + + L K VH + I
Sbjct: 148 TALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIK 207
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK-FDDS 242
G ++ S+ N+ S YAK L A F I E + V++W ++I C ++ +
Sbjct: 208 YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE--KNVITWTTMISACAEDEECVELG 265
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
++ + M+ DG P+ T+ S++S C L G+ V + G + ++ V N+ + +
Sbjct: 266 MSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYL 325
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ-----KGDLD------EALRLFFAME 351
Y + G+ D A LF+ M D + ++W AMISGYAQ K DL +AL +F ++
Sbjct: 326 YLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLK 385
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ PDL T S++S C ALE G+ G +V+V +AL++MY+KCG I
Sbjct: 386 RSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQ 445
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
DA + F +P +T V+WT+MI+G + +G+ EA+ LF +M +RPN +TF+++L AC+
Sbjct: 446 DANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS 505
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
+AG +E+ YF++M K Y + P ++HY CM D+ R G++++A F++ + + IW
Sbjct: 506 YAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIW 565
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
+L+ C+ H N+E+ Y A +L EL+P Y+ + N+Y RW VA +R +MK+
Sbjct: 566 SSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQE 625
Query: 592 QVKKFPGQSLVHINGKTCTFTVED 615
V +S + I K F D
Sbjct: 626 DVGILRDRSWITIKDKVYFFRAND 649
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 215/449 (47%), Gaps = 20/449 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + ++ L +F M + P++ T AC D + +HG+ +
Sbjct: 147 WTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAI 206
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ-MGFLEKVL 140
K S + ++ +YAK LD A + F ++P+++V +W MI A+ +E +
Sbjct: 207 KYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGM 266
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF +M + G+ + T+ + L+L K V +F IG + ++ V N+ + Y
Sbjct: 267 SLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLY 326
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-------------DSLNFYR 247
+ + A +F +E+ ++++WN++I G Y D +L +R
Sbjct: 327 LRKGETDEAMRLFEQMEDA--SIITWNAMISG--YAQIMDSAKDDLQARSRGFQALTIFR 382
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
+ +PD+ T S+LS C AL QG +H+ I GF DV V + L++MY+KCG
Sbjct: 383 DLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG 442
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
I A F M RT V+WT+MISGY+Q G EA++LF M AG P+ +T +S++S
Sbjct: 443 CIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 502
Query: 368 GCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTV 425
C +G +E + +FD ++ V +IDM+ + G + DA E
Sbjct: 503 ACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNE 562
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMEL 454
W++++AGC +G A +++EL
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADKLLEL 591
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 163/331 (49%), Gaps = 14/331 (4%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L + L ++VH G AD+ V + ++AY +C+ + A +F G+ E
Sbjct: 84 LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPE-- 141
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R VV+W +++ G T + L + M+ G P T+ + L++C+ + G+ V
Sbjct: 142 RNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQV 201
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + I YG + S+ N+L S+Y+K G +DSA F + ++ ++WT MIS A+ +
Sbjct: 202 HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEEC 261
Query: 341 DE-ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
E + LF M G +P+ T+ S++S CG L LGK ++ G + N+ V N+
Sbjct: 262 VELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNS 321
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA-----------LNGEFVEALDLF 448
+ +Y + G +A LF + + ++++W MI+G A +AL +F
Sbjct: 322 TMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIF 381
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ ++P+ TF ++L C+ LE+G
Sbjct: 382 RDLKRSVMKPDLFTFSSILSVCSAMMALEQG 412
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ +G V LL CV +L R VH H G D+ V +L++ Y +C
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
AR LFDGM +R V+WTA+++GY L +F M G P T+ + ++
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C S ++LGK YA G + + N+L +Y+K GS+ A F+ +PEK V++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248
Query: 429 TTMIAGCALNGEFVE-ALDLFHQMMELDLRPNRVTFLAVLQAC 470
TTMI+ CA + E VE + LF M+ + PN T +V+ C
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLC 291
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 153/360 (42%), Gaps = 26/360 (7%)
Query: 5 SLPPRLNKIYRSSTIN--QWNSQIREAVDKNE-AHKALLLFRRMKKNDIEPNNLTFPFIA 61
SL L +R N W + I + E + LF M + + PN T +
Sbjct: 229 SLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVM 288
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
C D + + K +++ V+ + + +Y + D A +LF++M D +
Sbjct: 289 SLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASII 348
Query: 122 SWNAMIVGFAQM-------------GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+WNAMI G+AQ+ GF + L +F +++ ++ D T +
Sbjct: 349 TWNAMISGYAQIMDSAKDDLQARSRGF--QALTIFRDLKRSVMKPDLFTFSSILSVCSAM 406
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L + +H+ I G +DV V + ++ Y KC ++ A F +E RT V+W S
Sbjct: 407 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAF--LEMPTRTFVTWTS 464
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI--- 285
+I G + + +++ + M G RP+ T VSLLS+C + + H +
Sbjct: 465 MISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAE--HYFDMMKK 522
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSA-RFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
Y + V +I M+ + G ++ A F+ + W+++++G G+++ A
Sbjct: 523 EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAF 582
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/537 (35%), Positives = 292/537 (54%), Gaps = 11/537 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
I I+ + F + ++ +V + A R+ A +LFD++PD ++A WN+M G+AQ
Sbjct: 120 IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSES 179
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+V+ LF+ M+ + I+ + T + ++ L + VH F I G + V T
Sbjct: 180 YREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTT 239
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I Y+ + A +F + E R VV+W S+I G L R +
Sbjct: 240 LIDMYSAGGTVGDAYKIFCEMFE--RNVVAWTSMINGYI----LSADLVSARRLFDLAPE 293
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
DV ++S + +V+ R + + DV NT++ Y+ G++++ L
Sbjct: 294 RDVVLWNIMVSGYIEGGDMVEARKLFXEMP----NRDVMFWNTVLKGYATNGNVEALEGL 349
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGA 374
F+ M +R SW A+I GYA G E L F M + +VP + T+++++S C + GA
Sbjct: 350 FEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGA 409
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LGKW YA S GLK NV V NAL+DMY+KCG I +A +F + K ++SW T+I G
Sbjct: 410 LDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGG 469
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A++ +AL+LF QM +P+ +TF+ +L ACTH G +E G+ YF M Y + P
Sbjct: 470 LAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMP 529
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
++ HY CM D+L R G+L++A FV+ MP+++D IW LL AC+I++N+E+ E RL
Sbjct: 530 QIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRL 589
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
ELEP + A YV ++NIY GRW+ VA L+ M+ KK PG SL+ +N F
Sbjct: 590 IELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEF 646
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 212/443 (47%), Gaps = 13/443 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS R + + LF +MK DI PN TFP + K+C K++ + + +H
Sbjct: 163 NIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVH 222
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++K F + FV TT++DMY+ + AYK+F +M +R+V +W +MI G+ L
Sbjct: 223 CFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLV 282
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
LF + + V G + + L + + DV NT +
Sbjct: 283 SARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMP--------NRDVMFWNTVL 334
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRP 256
YA +++ E +F + E R + SWN++IGG + F + L ++ M+ + P
Sbjct: 335 KGYATNGNVEALEGLFEEMPE--RNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPP 392
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T+V++LS+C AL G+ VH + G +V V N L+ MY+KCG I++A +F
Sbjct: 393 NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVF 452
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
GM + +SW +I G A +AL LFF M+ AG+ PD +T + ++ C G +E
Sbjct: 453 RGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVE 512
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAG 434
G +F + A + + ++DM ++ G + A +P E V W ++
Sbjct: 513 DGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGA 572
Query: 435 CALNGEFVEALDLFHQMMELDLR 457
C + A +++EL+ +
Sbjct: 573 CRIYKNVELAELALQRLIELEPK 595
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 312/596 (52%), Gaps = 25/596 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V+ AL + MK+ + +F I K A + Q +H IV
Sbjct: 68 WNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIV 127
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++F + ++DMYAKC+R++ A+++F + R+ +WNA+I G+A +G
Sbjct: 128 KIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFW 187
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M L G++ D T L L VH+ + G+ +D +VCN I+AY+
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C ++ AE VF G E R +V+WNS++ ++ +++ + M GF PD+ T
Sbjct: 248 ECGSIEDAERVFDGAIE-TRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTY 306
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY--SKCGDIDSARFLFDGM 319
S++S+ QG+ +H I G + V + N+LI+MY S +D A +F+ +
Sbjct: 307 TSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL 366
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ VSW ++++G++Q G ++AL+ F M + V D +++ C L+LG+
Sbjct: 367 ENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 426
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
++ CG I DAR+ F A P+ + ++W ++I G A +G
Sbjct: 427 ----------------------QVHVLCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 464
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
ALDLF M + ++ + +TF+AVL AC+H G +E+GW + M Y + P + HY
Sbjct: 465 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 524
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLLGR G+L EA +++MP + DA +W TLL AC+ +IE+ VA L ELEP
Sbjct: 525 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEP 584
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV +++++ RW+ A+++ +MK VKK PG S + + + +F ED
Sbjct: 585 EEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVHSFNAED 640
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 217/476 (45%), Gaps = 16/476 (3%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +KS + I+ ++ YAKC + A K+FD+ RD SWN MI G G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E L +M+ G D + + + ++ + + VHS + IG + +V +
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSAL 141
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC ++ A VF+ I +R V+WN++I G + + M +G
Sbjct: 142 LDMYAKCERVEDAFEVFKSIN--IRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEI 199
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T LL+ P+ VH+ + +G D +V N +I+ YS+CG I+ A +F
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259
Query: 317 DGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
DG + R V+W +M++ Y +EA LF M+ G PD+ T S+IS +
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQ 319
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMY--SKCGSIGDARELFYALPEKTVVSWTTMIA 433
GK GL+ V + N+LI MY S S+ +A +F +L K VSW +++
Sbjct: 320 GQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILT 379
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW------GYFNLMT 487
G + +G +AL F M + + F AVL++C+ L+ G G
Sbjct: 380 GFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLCGVIEDAR 439
Query: 488 KVYQVNPELNHYSCMADLLG--RKGKLKEALD---FVQSMPIKSDAGIWGTLLCAC 538
K + P+ + + + + G + G+ K ALD ++ +K D + +L AC
Sbjct: 440 KSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTAC 495
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL + + H I G + N +IS Y+KCG+I A +FD R VSW MI+
Sbjct: 14 ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIA 73
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G G+ + AL +M+ G D + S++ G G +E+G+ + G +
Sbjct: 74 GXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEG 133
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
NV +AL+DMY+KC + DA E+F ++ + V+W +I+G A G+
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGD 181
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 298/554 (53%), Gaps = 8/554 (1%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C+K +H +K+ SD+ V ++++YAKC +L A ++FD+M +R++ SW
Sbjct: 13 CSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSW 72
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
+AMI G+ Q+G L LF + +V + + +V+ A K L K +H +
Sbjct: 73 SAMISGYEQIGEPISALGLFSKLNIVPNEYVYASVI---SACASLKGLVQGKQIHGQALK 129
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR-TVVSWNSIIGGCTYGDKFDDS 242
G+D+ V N I+ Y KC A L + E L V++N++I G + D
Sbjct: 130 FGLDSVSFVSNALITMYMKCGKCSDALLAYN---EALELNPVAYNALITGFVENQQPDKG 186
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
R M DGF PD T V LL +C + L +G L+H I + + N +I+M
Sbjct: 187 FEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITM 246
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVT 361
YSK ++ A F + ++ +SW IS + D ++AL F M V PD T
Sbjct: 247 YSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFT 306
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S ++ C ++ GK + L +V NALI+MY+KCG I A +F +
Sbjct: 307 FASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKME 366
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ +VSW TMIAG +G +A +LF +M + ++P+ VTF+ +L A HAG +++G
Sbjct: 367 HQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLV 426
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YFN M + Y ++PE+ H+SC+ DLLGR G+L EA ++++ P D + G+LL AC++H
Sbjct: 427 YFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLH 486
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+++ G+ A +L +L+P + +PYV ++N+YA WDGVA ++K + +KK PG SL
Sbjct: 487 GDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSL 546
Query: 602 VHINGKTCTFTVED 615
+ +NG FTV D
Sbjct: 547 IEVNGTFEKFTVVD 560
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 212/438 (48%), Gaps = 10/438 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I E AL LF ++ +I PN + + ACA L + + IHG +
Sbjct: 72 WSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQIHGQAL 128
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S FV ++ MY KC + A +++ + + ++NA+I GF + +K
Sbjct: 129 KFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFE 188
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ M G D T +GL L + +H I + +++ + N I+ Y+
Sbjct: 189 VLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYS 248
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GFRPDVTT 260
K N L+ AE FR IEE + ++SWN+ I C++ + + +L ++ M+ + RPD T
Sbjct: 249 KLNLLEEAEKAFRSIEE--KDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFT 306
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S L++C ++ G+ +H H I DV N LI+MY+KCG I A ++F M
Sbjct: 307 FASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKME 366
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ VSW MI+G+ G +A LF M+ G PD VT + +++ +G ++ G
Sbjct: 367 HQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLV 426
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCAL 437
+F++ + G+ + + LID+ + G + +A+E P TVV ++++ C L
Sbjct: 427 YFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVV-LGSLLSACRL 485
Query: 438 NGEFVEALDLFHQMMELD 455
+G+ Q+++L
Sbjct: 486 HGDVDTGKCFARQLLKLQ 503
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 132/282 (46%), Gaps = 13/282 (4%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V SL+ C +AL QG +H+ I DV V N ++++Y+KC + AR +FD M
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R VSW+AMISGY Q G+ AL LF + VP+ S+IS C L GK
Sbjct: 66 ERNLVSWSAMISGYEQIGEPISALGLFSKLNI---VPNEYVYASVISACASLKGLVQGKQ 122
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
A GL V NALI MY KCG DA + E V++ +I G N +
Sbjct: 123 IHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQ 182
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+ ++ M + P+R TF+ +L C L++G + + +LN +
Sbjct: 183 PDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGE-----LLHCQTIKLKLNSTA 237
Query: 501 CMADLL----GRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ +L+ + L+EA +S+ K D W T + +C
Sbjct: 238 FIGNLIITMYSKLNLLEEAEKAFRSIEEK-DLISWNTFISSC 278
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 5/258 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I N+ KAL F+ M + + P+ TF AC+ L+ + IHGH+
Sbjct: 271 WNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHL 330
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+++ + D+ +++MYAKC + AY +F KM +++ SWN MI GF GF K
Sbjct: 331 IRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAF 390
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVSVCNTWISA 199
LF M+ +G++ D VT +GL A+ HA + L +S G+ ++ + I
Sbjct: 391 ELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDL 450
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
+ L A+ + G TVV S++ C D F R ++ +P T
Sbjct: 451 LGRAGRLNEAKEYMKKFPFGHDTVV-LGSLLSACRLHGDVDTGKCFARQLL--KLQPATT 507
Query: 260 TVVSLLSSCVCPEALVQG 277
+ LLS+ + + G
Sbjct: 508 SPYVLLSNLYASDEMWDG 525
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 307/596 (51%), Gaps = 4/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALL--LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN I K + + LF+RM+ + PN TF + A + + H
Sbjct: 79 WNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHAL 138
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+K+ + D+FV +++++MY K + A K+FD +P+R+ SW +I G+A +
Sbjct: 139 AIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEA 198
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
LF MR D + A + K +H + G+ + SV N ++
Sbjct: 199 WELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTM 258
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC L A F G + ++W+++I G ++LN + +M +G +P
Sbjct: 259 YGKCGCLDDALKTFE--LSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEF 316
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T V ++++C AL +G+ +H + + G++ + + L+ MY+KCG + AR FD +
Sbjct: 317 TFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYL 376
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ V WT+MISGYAQ G+ + AL L+ M+ +P +T+ S++ C ALE GK
Sbjct: 377 KEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGK 436
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G V + +AL MY+KCGS+ D +F +P + +++W MI+G + NG
Sbjct: 437 QIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNG 496
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
E ++AL+LF ++ +P+ VTF+ VL AC+H G +E+G YF +M + + P + HY
Sbjct: 497 EGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHY 556
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM D+L R GKL E +F++S I +W LL AC+ +RN E+G Y +L EL
Sbjct: 557 ACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGS 616
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ Y+ +++IY GR D V +R +MK V K PG S + + + F V D
Sbjct: 617 QESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGD 672
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 258/527 (48%), Gaps = 14/527 (2%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+ P + +F + C + D + IH ++++ +S +++ ++V++YAKC + A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFL--EKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
+F+ + ++DV SWN +I G++Q G + V+ LF MR + T G+ AA
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ H+ I DV V ++ I+ Y K + A VF I E R VSW
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPE--RNTVSWA 183
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+II G ++ + M + D S+LS+ P+ + G+ +H +
Sbjct: 184 TIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN 243
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G SV N L++MY KCG +D A F+ D+ ++W+AMI+GYAQ GD EAL LF
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF 303
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
+ M G P T + +I+ C GALE GK Y+ G + + AL+DMY+KC
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKC 363
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
GS+ DAR+ F L E +V WT+MI+G A NGE AL L+ +M + P+ +T +VL
Sbjct: 364 GSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVL 423
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
+AC+ LE+G + T Y + E+ S ++ + + G L++ + MP + D
Sbjct: 424 RACSSLAALEQG-KQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR-D 481
Query: 528 AGIWGTLLCACKIHRNIEIGEYV-AYRLFELEPHSAAP--YVEMANI 571
W ++ + GE + A LFE H YV N+
Sbjct: 482 IMTWNAMISGLS-----QNGEGLKALELFEELRHGTTKPDYVTFVNV 523
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 275/501 (54%), Gaps = 3/501 (0%)
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLL 174
P +N ++ G E L LF M + + D TV ++ L +
Sbjct: 79 PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+ + ++ + G+ AD V ++ I YA C D+ A+L+F +EE VV WN+II
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEEN--GVVMWNAIITAYM 196
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+ + + ++ M+ G D T+VS++++C G+ V + G + +
Sbjct: 197 KNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRN 256
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
++ LI MY+KCG++ AR LFDGM R V+W+AMISGY Q EAL LF M+ A
Sbjct: 257 LMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAE 316
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P+ VT++S++S C GALE GKW +Y L +++ AL+D Y+KCG I DA
Sbjct: 317 VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAV 376
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
E F ++P K +WT +I G A NG EAL+LF M + + P VTF+ VL AC+H+
Sbjct: 377 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSC 436
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+E+G +F+ MT+ Y + P HY C+ DLLGR G + EA F+++MPI+ +A IW L
Sbjct: 437 LVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRAL 496
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L +C +H+N+EIGE ++ L P + Y+ ++NIYA G+W A +R MK ++
Sbjct: 497 LSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIE 556
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K PG SL+ ++G F ED
Sbjct: 557 KTPGCSLIELDGVVVEFFAED 577
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 208/437 (47%), Gaps = 5/437 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
+N +R + AL LF M + P+ T K+C+++ + I +
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK +D FV ++++ MYA C + A LFD + + V WNA+I + + G +V+
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M VG+ D +T++ + A L K V + G+ + ++ I Y
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC +L A +F G++ R VV+W+++I G T D+ ++L + M P+ T
Sbjct: 266 AKCGELGKARRLFDGMQS--RDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVT 323
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+VS+LS+C AL G+ VHS+ L + + L+ Y+KCG ID A F+ M
Sbjct: 324 MVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMP 383
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ +WTA+I G A G EAL LF +M A P VT + ++ C S +E G +
Sbjct: 384 VKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRR 443
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
FD+ G+K ++D+ + G I +A + +P E V W +++ CA++
Sbjct: 444 HFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVH 503
Query: 439 GEFVEALDLFHQMMELD 455
+ Q++ L+
Sbjct: 504 KNVEIGEEALKQIVSLN 520
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL +S + W++ I ++ +AL LF M+ ++EPN++T + ACA L
Sbjct: 276 RLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLG 335
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ +H +I + I + T +VD YAKC +D A + F+ MP ++ +W A+I
Sbjct: 336 ALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 395
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G A G + L LF +MR I+ VT +G+ A H+
Sbjct: 396 GMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHS 435
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 193/611 (31%), Positives = 303/611 (49%), Gaps = 62/611 (10%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
++T + + E V NE ++A L M+ + +P + FL++Q+
Sbjct: 19 TATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTD--------------SFLHNQL 64
Query: 76 IH-----------GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
+H ++ DIF ++ YAK + FD+MP RD S+N
Sbjct: 65 LHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYN 124
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
I GF+ ++ L LF M+ G + T++ + A+ L K +H I
Sbjct: 125 TTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVR 184
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
+V + N YAKC +++ A +F + + + +VSWN +I G + + +
Sbjct: 185 NFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTK--KNLVSWNLMISGYAKNGQPEKCIG 242
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
M G PD T ++T+I+ Y
Sbjct: 243 LLHQMRLSGHMPDQVT-----------------------------------MSTIIAAYC 267
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
+CG +D AR +F ++ V WTAM+ GYA+ G ++AL LF M PD T+ S
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++S C + +L G+ + GL +N++V +ALIDMYSKCG I DAR +F +P +
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
VVSW MI GCA NG +AL+LF M++ +P+ VTF+ +L AC H ++E+G YF+
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFD 447
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
+T + + P L+HY+CM +LLGR G++++A+ +++M D IW TLL C +I
Sbjct: 448 SITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDI 507
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
E A LFEL+P A PY+ ++N+YA GRW VA++R +MK VKKF G S + I
Sbjct: 508 VNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEI 567
Query: 605 NGKTCTFTVED 615
+ + FT ED
Sbjct: 568 DNEVHRFTSED 578
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
++ I W + + ALLLF M IEP++ T + +CAKL+ +
Sbjct: 282 FKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG 341
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
Q +HG + + +++ V + ++DMY+KC +D A +F+ MP R+V SWNAMIVG AQ
Sbjct: 342 QAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQN 401
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
G + L LF NM + D VT +G+ A +H
Sbjct: 402 GHDKDALELFENMLQQKFKPDNVTFIGILSACLH 435
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 297/552 (53%), Gaps = 3/552 (0%)
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
A KL D Q IH I+ S + F+ ++++ Y C L A ++F P ++V
Sbjct: 28 ASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNV 87
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SW +I G A+ + + +F M + + + VT+ + A + + + KSVH F
Sbjct: 88 VSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ G + +V V + Y+K + +A +F + E R VV+WN+I+ G + +
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE--RNVVTWNAIVSGYSDHGFSE 205
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++++ + M G D T++SL+ + + L G +H I G++ D + L+
Sbjct: 206 EAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALM 265
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DL 359
+Y +D A +F M + +WT M++G++ D A++ F M + D
Sbjct: 266 DIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS 325
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+ ++ ++S C SGAL+ G+ A +N+ V +A+IDMY+ CG++ DA+ FY
Sbjct: 326 IALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ EK VV W MIAG +NG +A+DLF QM L P+ TF++VL AC+HAG + +G
Sbjct: 386 MGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEG 445
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
F M K V P L HY+C+ D+LGR G+L A F+ +MP + D ++ TLL AC+
Sbjct: 446 LQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACR 505
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
IH NI++G ++ ++FE+EP+ A YV ++N+YAL G W+GV R ++ ++KK PG
Sbjct: 506 IHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGF 565
Query: 600 SLVHINGKTCTF 611
S + IN + TF
Sbjct: 566 SSIEINQEIYTF 577
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 220/434 (50%), Gaps = 7/434 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ +FR M + +PN +T + A A L ++ +H V+ F ++FV+T +V
Sbjct: 105 EAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
DMY+K + A +LF+ M +R+V +WNA++ G++ GF E+ + LF MR G+ DF
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFY 224
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+M L A++ L + +H F I G + D + + Y N + A VF
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFS-- 282
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALV 275
E ++ V +W ++ G + G +D ++ + M+ + D ++ +LSSC AL
Sbjct: 283 EMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQ 342
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
QGR VH+ I F ++ V + +I MY+ CG+++ A+ F GM ++ V W AMI+G
Sbjct: 343 QGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNG 402
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 394
G +A+ LF M+ +G PD T +S++ C +G + G + F + + + N+
Sbjct: 403 MNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNL 462
Query: 395 MVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ID+ + G + A +P + ++T++ C ++G ++ ++ E
Sbjct: 463 QHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFE 522
Query: 454 LDLRPNRVTFLAVL 467
++ PN + +L
Sbjct: 523 ME--PNDAGYYVLL 534
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 146/302 (48%), Gaps = 8/302 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + D + +A+ LF M++ + + T + A + IHG I+
Sbjct: 191 WNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFII 250
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + +D ++T ++D+Y + +D A+++F +M +DVA+W M+ GF+ ++ +
Sbjct: 251 RTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIK 310
Query: 142 LFYNMRLVGIQA---DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
F M +GIQ D + +MG+ + H+ L + VH+ I ++ V + I
Sbjct: 311 HFNKM--LGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVID 368
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YA C +L+ A+ F G+ E + VV WN++I G D+++ + M G PD
Sbjct: 369 MYANCGNLEDAKRFFYGMGE--KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDE 426
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFD 317
+T VS+L +C + +G + H + + ++ +I + + G +D+A +
Sbjct: 427 STFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFIN 486
Query: 318 GM 319
M
Sbjct: 487 NM 488
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 306/565 (54%), Gaps = 13/565 (2%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD--KMPDRD 119
++CA ++ + +H H++K+ F+ T++++MY+KC +D + ++F+ +++
Sbjct: 37 QSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNKN 96
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V ++NA+I GF ++ L L+ MR +GI D T + +A ++ +H
Sbjct: 97 VFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHG 156
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+G++ DV V + ++ Y K + A VF E +R VV WN+++ G +F
Sbjct: 157 LMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFE--ELPVRDVVLWNAMVNGFAQIGRF 214
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+++L +R M +G P TV +LS GR VH G++ V V N L
Sbjct: 215 EEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNAL 274
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PD 358
I MY KC + A +F+ M + SW +++S + + GD LRLF M + V PD
Sbjct: 275 IDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPD 334
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLK--------DNVMVCNALIDMYSKCGSI 410
LVTV +++ C AL G+ Y GL D+V++ NAL+DMY+KCG++
Sbjct: 335 LVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNM 394
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
DAR +F + EK V SW MI G ++G EALD+F +M + + PN ++F+ +L AC
Sbjct: 395 RDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSAC 454
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+HAG +++G G+ + M Y V+P + HY+C+ D+L R G+L EA D V +MP K+D
Sbjct: 455 SHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVG 514
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
W +LL AC++H + ++ E A ++ ELEP YV M+N+Y + GR++ V R MK+
Sbjct: 515 WRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQ 574
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
VKK PG S + + F D
Sbjct: 575 QNVKKRPGCSWIELVNGVHVFITGD 599
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 217/439 (49%), Gaps = 15/439 (3%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
+ + + +N+ I + +AL L+ +M+ I P+ TFP + +AC D
Sbjct: 92 HHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVV 151
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
IHG + K D+FV + +V+ Y K + AY++F+++P RDV WNAM+ GFAQ+
Sbjct: 152 TKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQI 211
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G E+ L +F M G+ TV G+ ++VH F +G ++ V V
Sbjct: 212 GRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVS 271
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY-GDKFDDSLNFYRHMIYD 252
N I Y KC + A VF ++E + SWNSI+ GD + F R M
Sbjct: 272 NALIDMYGKCKCVGDALSVFEMMDE--IDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSS 329
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI---------HYGFDLDVSVINTLISMY 303
+PD+ TV ++L +C AL+ GR +H + + H FD DV + N L+ MY
Sbjct: 330 RVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFD-DVLLNNALMDMY 388
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
+KCG++ AR +F M ++ SW MI+GY G EAL +F M A VP+ ++ +
Sbjct: 389 AKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFV 448
Query: 364 SMISGCGQSGALELGKWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
++S C +G ++ G F G+ ++ +IDM + G + +A +L +P
Sbjct: 449 GLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPF 508
Query: 423 KT-VVSWTTMIAGCALNGE 440
K V W +++A C L+ +
Sbjct: 509 KADPVGWRSLLAACRLHND 527
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 2/235 (0%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR--F 314
D+ T ++ L SC L +G+ +H+H + F I +LI+MYSKC ID + F
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF 87
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F ++ ++ A+I+G+ AL L+ M G PD T +I CG
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDD 147
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ GL+ +V V +AL++ Y K +G+A +F LP + VV W M+ G
Sbjct: 148 GFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNG 207
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
A G F EAL +F +M + P R T VL + G + G +TK+
Sbjct: 208 FAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKM 262
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 199/565 (35%), Positives = 304/565 (53%), Gaps = 16/565 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C L +Q H I+ + F + F+ T +V YA C L + +F+ + + V W
Sbjct: 38 CIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVEAKSVYLW 97
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
N++I G+ + + L LF M G+ D T+ + + + L K +H GI
Sbjct: 98 NSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGKLIHGKGIR 157
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK----- 238
IG +DV V N+ +S Y +C + A VF E R V S+N +I GC +
Sbjct: 158 IGFVSDVVVGNSLMSMYCRCGEFGDAVKVFD--ETPHRNVGSFNVVISGCAALENCNFTS 215
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDL----DV 293
DD NF+ M +GF+ D TV SLL C GR +H + + G DL DV
Sbjct: 216 HDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSDV 275
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ ++LI MYS+ + R +FD M +R WTAMI+GY Q G D+AL L AM+
Sbjct: 276 HLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQMK 335
Query: 354 -GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G P+ V+++S + CG L GK ++ L D+V +CNALIDMYSKCGS+
Sbjct: 336 DGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCGSLDY 395
Query: 413 ARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
AR F K ++W++MI+ L+G EA+ +++M++ +P+ +T + VL AC+
Sbjct: 396 ARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSACS 455
Query: 472 HAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+G +++G Y +LMTK Y++ P + +C+ D+LGR G+L +AL+F++ MP+ +
Sbjct: 456 KSGLVDEGISIYKSLMTK-YEIKPTVEICACVVDMLGRSGQLDQALEFIKEMPLDPGPSV 514
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
WG+LL A IH N + L ELEP + + Y+ ++N YA RWD V +RT+MK
Sbjct: 515 WGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYISLSNTYASDRRWDVVTEVRTIMKE 574
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
+KK PG S + I+GKT +F+V D
Sbjct: 575 RGLKKVPGCSWITISGKTHSFSVAD 599
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 226/455 (49%), Gaps = 16/455 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ ++ WNS I V ++ +AL LFR M +N + P++ T + K +L D + +
Sbjct: 90 EAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGK 149
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM- 133
+IHG ++ F SD+ V +++ MY +C A K+FD+ P R+V S+N +I G A +
Sbjct: 150 LIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALE 209
Query: 134 --GFL--EKVLCLFYNMRLVGIQADFVTVMGLTQAAI-HAKHLSLLKSVHSF----GIHI 184
F + + F M+ G +AD TV L + +H + G+ +
Sbjct: 210 NCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDL 269
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
+D+DV + ++ I Y++ + + VF ++ R V W ++I G DD+L
Sbjct: 270 KMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKN--RNVYVWTAMINGYVQNGAPDDALV 327
Query: 245 FYRHM-IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
R M + DG RP+ +++S L +C L+ G+ +H I + DVS+ N LI MY
Sbjct: 328 LLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMY 387
Query: 304 SKCGDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
SKCG +D AR F+ + ++W++MIS Y G +EA+ ++ M G PD++TV
Sbjct: 388 SKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITV 447
Query: 363 LSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ ++S C +SG ++ G + + +K V +C ++DM + G + A E +P
Sbjct: 448 VGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFIKEMP 507
Query: 422 EKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELD 455
S W +++ ++G + ++EL+
Sbjct: 508 LDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELE 542
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 212/465 (45%), Gaps = 16/465 (3%)
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
+Y V + +++ L Q I + L + H+ + G + + +SAYA
Sbjct: 16 YYTSATVSLAHTPQSLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYAT 75
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
C +L + VF +E ++V WNS+I G F +L +R M +G PD T+
Sbjct: 76 CGELATSRFVFESVEA--KSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLA 133
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
++ E LV G+L+H GI GF DV V N+L+SMY +CG+ A +FD R
Sbjct: 134 TVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHR 193
Query: 323 TRVSWTAMISGYAQKGDL-----DEALRLFFAMEAAGEVPDLVTVLSMIS-GCGQSGALE 376
S+ +ISG A + D+ F M+ G D TV S++ CG +G +
Sbjct: 194 NVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWD 253
Query: 377 LGKWFDNYACSGGL----KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G+ Y GL +V + ++LIDMYS+ + R +F + + V WT MI
Sbjct: 254 YGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMI 313
Query: 433 AGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
G NG +AL L M M+ +RPN+V+ ++ L AC L G K+ +
Sbjct: 314 NGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKM-E 372
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+N +++ + + D+ + G L A ++ DA W +++ A +H E
Sbjct: 373 LNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAY 432
Query: 552 YRLFE--LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
Y++ + +P ++ G +G++ +++M + ++K
Sbjct: 433 YKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIK 477
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 303/604 (50%), Gaps = 32/604 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S IR HK+L F M + + P++ FP + KACA L D + +HG+I+
Sbjct: 76 WKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYII 135
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLD-------CAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ D++ +++MY+K L A ++ D+M +R + A +
Sbjct: 136 RVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASV------- 188
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVC 193
LVG Q V+ + + + V + ++ C
Sbjct: 189 -------------LVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEAC 235
Query: 194 N--TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
N I + + +F + E + +VSWN+II G + ++L R M
Sbjct: 236 NLGQQIKDISHSMSVDSVRKIFEMMPE--KDLVSWNTIIAGNARNGLYGETLTMVREMGG 293
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+PD T+ S+L + +G+ +H I G D +V V ++LI MY+KC +
Sbjct: 294 ANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVD 353
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ +F + +R +SW ++I+G Q G DE L+ F M A P + S++ C
Sbjct: 354 SYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAH 413
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
L LGK Y G +N+ + ++L+DMY+KCG+I AR++F + + +VSWT M
Sbjct: 414 LTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAM 473
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I GCAL+G ++A++LF QM + PN V F+AVL AC+HAG +++ W YFN MT +
Sbjct: 474 IMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFG 533
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ P + HY+ ++DLLGR G+L+EA DF+ MPI +W TLL AC++H+N+++ E VA
Sbjct: 534 IAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVA 593
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
R+ E++P + Y+ +ANIY+ RW A R ++R ++K P S + + K F
Sbjct: 594 NRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAF 653
Query: 612 TVED 615
D
Sbjct: 654 MAGD 657
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 196/451 (43%), Gaps = 28/451 (6%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+Y+ + L + +LF+ + +W ++I + G K L F M G+ D
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKM-------AE 210
+ +A L+L +S+H + I +G+D D+ N ++ Y+K LK A
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
V + E R+V + + ++G G K D + F DV SC
Sbjct: 171 QVLDEMTERTRSVRTASVLVG--NQGRKVSD---------IEAFNYDV--------SCRS 211
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
E Q + +++ + I S +DS R +F+ M ++ VSW +
Sbjct: 212 REFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTI 271
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
I+G A+ G E L + M A PD T+ S++ ++ + GK + GL
Sbjct: 272 IAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGL 331
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
V V ++LIDMY+KC + D+ +F L E+ +SW ++IAGC NG F E L F Q
Sbjct: 332 DAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQ 391
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
M+ ++P +F +++ AC H L G +T+ + + S + D+ + G
Sbjct: 392 MLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR-NGFDENIFIASSLVDMYAKCG 450
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
++ A M ++ D W ++ C +H
Sbjct: 451 NIRTARQIFDRMRLR-DMVSWTAMIMGCALH 480
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 301/577 (52%), Gaps = 5/577 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + NE + AL F +M+ + P+ T + C D ++ IH + V
Sbjct: 411 WNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAV 470
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F S V ++ MYA C + +Y LF KM R + SWN MI GFA++G E L
Sbjct: 471 RNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLT 530
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M + D VT++GL + ++ + +SVHS I G +DVS+ N I+ YA
Sbjct: 531 LFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYA 590
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
C ++ + +F R +++N+++ G + + L + M+ + +P++ T+
Sbjct: 591 NCGIVEAGQQLFNSFCS--RNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTL 648
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL C ++ +QG+ +HS+ + L+ + + + MYS+ +I+ R +F +
Sbjct: 649 LNLLPVC---QSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSA 705
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R + W A +S Q D + F M PD VT+L++IS C Q G +
Sbjct: 706 RNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACI 765
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G N++V NALID +S+CGSI ARELF + EK V+W MI +++G
Sbjct: 766 MAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGNG 825
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
ALDLF M++ + P+ +TF+++L AC+H G +E+G F + + + P + HY+C
Sbjct: 826 EAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGITPRMEHYAC 885
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G L EA D V+SMP + +LL AC+ H N +IGE V L + E
Sbjct: 886 MVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKIGESVGKLLIKSEYGK 945
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
+ YV ++NIYA G+W LR M+ ++K G
Sbjct: 946 SRSYVMLSNIYASAGKWSDCEQLRLDMEAKGLRKNVG 982
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 221/418 (52%), Gaps = 3/418 (0%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+N TFP + +AC S + +H ++++ S++ VQT ++DMYAK ++D + ++F
Sbjct: 138 DNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVF 197
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D M RD+ SWNAM+ G++ G + + M+ G+ + T++G+ A
Sbjct: 198 DCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRV 257
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
S+H+F + G D S+ + IS YA +DL + LVF + ++ +VS+NS+I
Sbjct: 258 AGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFD--LQPVKDLVSFNSMISA 315
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV-CPEALVQGRLVHSHGIHYGFDL 291
+ ++ +R M G P++ T+VS+L SC + G VH I G
Sbjct: 316 YMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAE 375
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
VSV++ L+SMYSK G +DS+ LF ++ + W +MISGY + + AL F M+
Sbjct: 376 QVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQ 435
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
AG PD TV+++ISGC + L + K YA + V NAL+ MY+ CG I
Sbjct: 436 IAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDIS 495
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ LF + + ++SW TMI+G A G+ +L LF QM ++ + VT + ++ +
Sbjct: 496 TSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISS 553
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 226/450 (50%), Gaps = 3/450 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + +A+ + M++ + PN T I C D + +H +
Sbjct: 208 WNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFAL 267
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D + + ++ MYA D L + +FD P +D+ S+N+MI + Q ++
Sbjct: 268 KGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFE 327
Query: 142 LFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M G+ + +T++ L + ++ +SVH I +G+ VSV + +S Y
Sbjct: 328 VFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMY 387
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+K L + L+F E + + WNS+I G ++++ +L+ + M G PD TT
Sbjct: 388 SKLGKLDSSSLLFCCFTE--KNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATT 445
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V++++S C + L + +H++ + F+ SV+N L++MY+ CGDI ++ LF M
Sbjct: 446 VINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKME 505
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R +SW MISG+A+ GD + +L LF M DLVT++ +IS S +G+
Sbjct: 506 VRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGES 565
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ A G +V + NALI MY+ CG + ++LF + + +++ +++G N
Sbjct: 566 VHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNV 625
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+ L LF QM++ D +PN VT L +L C
Sbjct: 626 SEKILPLFTQMVKNDEKPNLVTLLNLLPVC 655
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 192/400 (48%), Gaps = 7/400 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM--PDRDVASWNAMIVGFAQM 133
IH + + D FV T +V+ Y + A LF + V S N ++ F+
Sbjct: 60 IHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFSDH 119
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
GF ++L L+ L G +D T + +A A L L + VH + G ++V V
Sbjct: 120 GFHRELLDLYRG--LCGFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQ 177
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ YAK + ++ VF + LR ++SWN+++ G + F +++ + M G
Sbjct: 178 TALLDMYAKAGQIDVSRRVFDCMV--LRDLISWNAMVSGYSVNGCFREAVETLQEMQQCG 235
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P+ +T+V ++ C V G +H+ + G D S+ + LISMY+ D+ S+R
Sbjct: 236 MSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSR 295
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS- 372
+FD + VS+ +MIS Y Q + EA +F M AG P+L+T++S++ C
Sbjct: 296 LVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLL 355
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
+ G+ GL + V V +AL+ MYSK G + + LF EK + W +MI
Sbjct: 356 FGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMI 415
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
+G +N E+ ALD F +M + P+ T + V+ C +
Sbjct: 416 SGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRY 455
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 159/346 (45%), Gaps = 4/346 (1%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L+ +H+ G D V + Y A L+F G V S N ++
Sbjct: 54 LKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVV 113
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ + L+ YR + GF D T ++ +C L GR VH + G
Sbjct: 114 RCFSDHGFHRELLDLYRGLC--GFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHG 171
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+V V L+ MY+K G ID +R +FD M R +SW AM+SGY+ G EA+ M
Sbjct: 172 SNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEM 231
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G P+ T++ ++ CG +G G +A GG D+ + +ALI MY+ +
Sbjct: 232 QQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDL 291
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+R +F P K +VS+ +MI+ + + EA ++F M + PN +T ++VL +C
Sbjct: 292 SSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSC 351
Query: 471 THAGF-LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ F + G ++ K+ + +++ S + + + GKL +
Sbjct: 352 SDLLFGINHGESVHGMIIKL-GLAEQVSVVSALVSMYSKLGKLDSS 396
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 299/597 (50%), Gaps = 52/597 (8%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P L P + + LS ++ IH HI+K+ F + Q + D +
Sbjct: 38 PTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHAL--QIPLNDFPSGLS-------- 87
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
A WN +I + + L ++ +R + + D + +A
Sbjct: 88 -------PSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWT 140
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
L K +H F + G+D DV V N + Y +C ++ A LVF + E R VVSW+++I
Sbjct: 141 QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME--RDVVSWSTMIR 198
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD- 290
+ +FD +L R M + RP +VS+++ + G+ +H++ I +
Sbjct: 199 SLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 258
Query: 291 -LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG---------------- 333
+ V L+ MY+KCG + AR LF+G+ +T VSWTAMI+G
Sbjct: 259 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDS 318
Query: 334 ---------------YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
YAQ +D+A LF M +G P VT++S++S C +GAL+LG
Sbjct: 319 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 378
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
KW +Y ++ + ++ AL+DMY+KCG I A LF + + W +I G A++
Sbjct: 379 KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMH 438
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EALD+F +M ++PN +TF+ +L AC+HAG + +G F M + + P++ H
Sbjct: 439 GYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEH 498
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM DLLGR G L EA + ++SMPIK + +WG L+ AC++H+N ++GE A +L E+E
Sbjct: 499 YGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIE 558
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + V M+NIYA RW A +R MK +KK PG S++ +NG F + D
Sbjct: 559 PENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGD 615
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 220/457 (48%), Gaps = 45/457 (9%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
QWN I +N+ AL ++ +++K D E +N P + KAC ++S + IHG +
Sbjct: 91 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K D+FV ++ MY +C ++ A +FDKM +RDV SW+ MI ++ + L
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMAL 210
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI------HIGVDADVSVCN 194
L M + ++ V ++ + ++ + K++H++ I H+GV ++
Sbjct: 211 ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTAL-- 268
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF--------------- 239
+ YAKC L +A +F G+ + +TVVSW ++I GC ++
Sbjct: 269 --LDMYAKCGHLGLARQLFNGLTQ--KTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV 324
Query: 240 ----------------DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
D + N + M G RP T+VSLLS C AL G+ VHS+
Sbjct: 325 MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 384
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
++D + L+ MY+KCGDI++A LF R W A+I+G+A G +EA
Sbjct: 385 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 444
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALID 402
L +F ME G P+ +T + ++ C +G + G K F+ + GL + ++D
Sbjct: 445 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 504
Query: 403 MYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALN 438
+ + G + +A E+ ++P K + W ++A C L+
Sbjct: 505 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 541
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL-----SDF 70
S I WN+ I +AL +F M++ ++PN++TF + AC+
Sbjct: 422 SRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKK 481
Query: 71 LYSQMIH--GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMI 127
L+ +M+H G + + + MVD+ + LD A+++ MP + + W A++
Sbjct: 482 LFEKMVHTFGLVPQIEHYG------CMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 535
Query: 128 VG 129
Sbjct: 536 AA 537
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 316/589 (53%), Gaps = 83/589 (14%)
Query: 41 LFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
LF+ M+ NDI+P +P + K+ K ++H +++K D V+ ++ +Y
Sbjct: 90 LFKHMQYYNDIKPYTSFYPVLIKSAGKAG-----MLLHAYLLKLGHSHDHHVRNAIMGIY 144
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
AK ++ A KLFD+MPDR A WN +I G+ + G ++ LF +M
Sbjct: 145 AKYGCIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLF-------------CMM 191
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
G ++ +V T ++ +AK +L+ A + F + E
Sbjct: 192 GESEK------------------------NVITWTTMVTGHAKMRNLETARMYFDEMPE- 226
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC------PEA 273
R V SWN+++ G +++ + M+ G PD TT V++LSSC E+
Sbjct: 227 -RRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAES 285
Query: 274 LVQ------------------------GRLVHSHGI--HYGFDLDVSVINTLISMYSKCG 307
+V+ G L + I G + N +IS Y++ G
Sbjct: 286 IVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVG 345
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMI 366
D+ AR LF+ M +R VSW +MI+GYAQ G+ +A++LF M ++ + PD VT++S+
Sbjct: 346 DLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVF 405
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S CG G L LG W + +K ++ N+LI MY +CGS+ DAR F + K +V
Sbjct: 406 SACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMATKDLV 465
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
S+ T+I+G A +G E++ L +M E + P+R+T++ VL AC+HAG LE+GW F +
Sbjct: 466 SYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKVFESI 525
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
KV P+++HY+CM D+LGR GKL+EA+ +QSMP++ AGI+G+LL A IH+ +E+
Sbjct: 526 -KV----PDVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHKQVEL 580
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
GE A +LF++EPH++ YV ++NIYAL GRW V +R M++ VKK
Sbjct: 581 GELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKK 629
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 41/335 (12%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ + A + + LF M + EP+ T+ + +C+ L D ++ I
Sbjct: 229 VASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVR 288
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK---------------------------- 110
+ + F S+ FV+T ++DM+AKC L+ A K
Sbjct: 289 KLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLS 348
Query: 111 ----LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAA 165
LF+KMP+R+ SWN+MI G+AQ G K + LF M + D VT++ + A
Sbjct: 349 LARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSAC 408
Query: 166 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
H L L S + +S N+ I Y +C ++ A + F+ E + +VS
Sbjct: 409 GHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQ--EMATKDLVS 466
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHG 284
+N++I G +S+ M DG PD T + +L++C L +G ++ S
Sbjct: 467 YNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKVFESIK 526
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ DV +I M + G ++ A L M
Sbjct: 527 V-----PDVDHYACMIDMLGRVGKLEEAVKLIQSM 556
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 283/526 (53%), Gaps = 4/526 (0%)
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+ TT++ Y + A LFD+MP+RDV +W MI G+ +F M
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN-DLKMA 209
+ + T+ + +A K LS + VH I G+D + V N + YA C + A
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+VFRGI L+ VSW ++I G T+ D L +R M+ + + + + +C
Sbjct: 165 CMVFRGIH--LKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 222
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
+ G +H+ +GF+ ++ V+N+++ MY +C A F M R ++W
Sbjct: 223 SIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+I+GY ++ + E+L +F ME+ G P+ T S+++ C L G+ G
Sbjct: 283 LIAGY-ERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRG 341
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L N+ + NALIDMYSKCG+I D+ ++F + + +VSWT M+ G +G EA++LF
Sbjct: 342 LDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFD 401
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M+ +RP+RV F+A+L AC+HAG +++G YF LM Y ++P+ Y C+ DLLGR
Sbjct: 402 KMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRA 461
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
GK++EA + ++SMP K D +WG L ACK H +G+ A+R+ +L PH A YV ++
Sbjct: 462 GKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLS 521
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIYA G+W A LR +MKR KK G+S V + +F V D
Sbjct: 522 NIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGD 567
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 222/497 (44%), Gaps = 27/497 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I N A ++F M +++PN T + KAC + Y +++HG +
Sbjct: 77 WTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAI 136
Query: 82 KSPFWSDIFVQTTMVDMYAK-CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K I+V ++DMYA C +D A +F + ++ SW +I G+ L
Sbjct: 137 KHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGL 196
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F M L ++ + + +A + + +H+ G ++++ V N+ + Y
Sbjct: 197 RVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMY 256
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C+ A F E R +++WN++I G + +SL + M +GF P+ T
Sbjct: 257 CRCSCFSEANRYF--YEMNQRDLITWNTLIAGYERSNP-TESLYVFSMMESEGFSPNCFT 313
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S++++C L G+ +H I G D ++++ N LI MYSKCG+I + +F GM
Sbjct: 314 FTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS 373
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
R VSWTAM+ GY G +EA+ LF M +G PD V ++++S C +G ++ G +
Sbjct: 374 RRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLR 433
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
+F + + + ++D+ + G + +A EL ++P K W + C
Sbjct: 434 YFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGAC--K 491
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
L LDLRP+ G + +++ +Y + +
Sbjct: 492 AHTFPNLGKLAAHRILDLRPHMA-------------------GTYVMLSNIYAADGKWGE 532
Query: 499 YSCMADLLGRKGKLKEA 515
++ + L+ R G KE
Sbjct: 533 FARLRKLMKRMGNKKET 549
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
K ++ LI Y G IG+AR LF +PE+ VV+WT MIAG A +F +
Sbjct: 40 KGPSVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCE 99
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYS--CM 502
MM +L PN T +VL+AC L G L K +Y N ++ Y+ C+
Sbjct: 100 MMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCV 159
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
+ + +A + + +K++ W TL+ A HR+ G +R LE
Sbjct: 160 S--------MDDACMVFRGIHLKNEVS-WTTLI-AGYTHRDDGYGGLRVFRQMLLEEVEL 209
Query: 563 APY 565
P+
Sbjct: 210 NPF 212
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 294/586 (50%), Gaps = 45/586 (7%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY--------SQMIHGHIVKSPFWSDI 89
AL LF RM ++ I + + + ACA+ Y +Q IH +V+ F SD
Sbjct: 227 ALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQ 286
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
V +++DMYAK ++D A K+F+ M + SWN ++ G+ Q+G E+ L + M+
Sbjct: 287 HVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQES 346
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
G + + VT + + I A+ D+ A
Sbjct: 347 GFEPNEVTYSNMLASCIKAR-----------------------------------DVPSA 371
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+F I + +V +WN+++ G + D++ +R M + +PD TT+ +LS+C
Sbjct: 372 RAMFDKISK--PSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCS 429
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
L G+ VHS + D+ V + LI MYSKCG + A+ +F+ M +R V W +
Sbjct: 430 RLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNS 489
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
MISG A +EA F M G P + SMI+ C + ++ G+ G
Sbjct: 490 MISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDG 549
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
NV V ++LIDMY+KCG++ DAR F + K +V+W MI G A NG +A++LF
Sbjct: 550 YDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFE 609
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
M+ +P+ VTF+AVL C+H+G +++ YFN M Y + P + HY+C+ D LGR
Sbjct: 610 YMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRA 669
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G+ E + + MP K DA +W LL AC +H N E+GE+ A LF L+P + +PYV ++
Sbjct: 670 GRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLS 729
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIYA GR + +R +M V K G S V+ F V D
Sbjct: 730 NIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGARAFMVAD 775
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 237/515 (46%), Gaps = 50/515 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + +AL ++R M + + P N T + AC ++ + HG V
Sbjct: 110 WNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAV 169
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + FV+ ++ MY KC + A +LFD M + S+ AM+ G AQ G ++ L
Sbjct: 170 KVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALR 229
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIH--------AKHLSLLKSVHSFGIHIGVDADVSVC 193
LF M I+ D V V + A A+ + L +S+H+ + G D+D V
Sbjct: 230 LFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVG 289
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N+ I YAK + A VF + ++VSWN ++ G ++ +L M G
Sbjct: 290 NSLIDMYAKGMKMDEAMKVFESMSS--VSIVSWNILVTGYGQLGCYERALEVLDLMQESG 347
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F P+ T ++L+SC+ K D+ SAR
Sbjct: 348 FEPNEVTYSNMLASCI-----------------------------------KARDVPSAR 372
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD + + +W ++SGY Q+ + + LF M+ PD T+ ++S C + G
Sbjct: 373 AMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLG 432
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
LELGK + + L +++ V + LIDMYSKCG +G A+ +F + E+ VV W +MI+
Sbjct: 433 ILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMIS 492
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A++ EA D F QM E + P ++ +++ +C + +G + +V +
Sbjct: 493 GLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGR---QIHAQVLKDG 549
Query: 494 PELNHY--SCMADLLGRKGKLKEALDFVQSMPIKS 526
+ N Y S + D+ + G + +A F M +K+
Sbjct: 550 YDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKN 584
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 175/368 (47%), Gaps = 18/368 (4%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N ISA + DL A + + + R VSWN++I D ++L YR M+ +G
Sbjct: 80 NAAISAACRAGDLAAARDLLGRMPD--RNAVSWNTVIAAVARSDSPGEALEMYRGMLQEG 137
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P T+ S+LS+C AL GR H + G D + V N L+ MY+KCG + A
Sbjct: 138 LAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAV 197
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-- 371
LFD M VS+TAM+ G AQ G +D+ALRLF M + D V V S++ C Q
Sbjct: 198 RLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQAC 257
Query: 372 ------SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ A+ L + G + V N+LIDMY+K + +A ++F ++ ++
Sbjct: 258 AGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSI 317
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW ++ G G + AL++ M E PN VT+ +L +C A + F+
Sbjct: 318 VSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDK 377
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHR 542
++K P + ++ + G++ ++ ++ + M ++ D +L C
Sbjct: 378 ISK-----PSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLG 432
Query: 543 NIEIGEYV 550
+E+G+ V
Sbjct: 433 ILELGKQV 440
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 194/462 (41%), Gaps = 47/462 (10%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
+++ + + L A L +MPDR+ SWN +I A+ + L ++ M
Sbjct: 75 NVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGML 134
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ T+ + A L + H + +G+D + V N + Y KC +
Sbjct: 135 QEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVA 194
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A +F + VS+ +++GG DD+L + M R D V S+L +
Sbjct: 195 DAVRLFDWMSS--PNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGA 252
Query: 268 CV--------CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
C A+ + +H+ + GFD D V N+LI MY+K +D A +F+ M
Sbjct: 253 CAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESM 312
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ VSW +++GY Q G + AL + M+ +G P+ VT +M++ C
Sbjct: 313 SSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASC---------- 362
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
K + AR +F + + +V +W T+++G
Sbjct: 363 -------------------------IKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEE 397
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ ++LF +M +++P+R T +L C+ G LE G + K+ N ++
Sbjct: 398 LHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHN-DMFVA 456
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
S + D+ + G++ A + +M + D W +++ IH
Sbjct: 457 SGLIDMYSKCGQVGIA-QIIFNMMTERDVVCWNSMISGLAIH 497
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 5/260 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+KI + S + WN+ + + E H+ + LFRRM+ +++P+ T I C++L
Sbjct: 375 FDKISKPS-VTTWNTLL-SGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLG 432
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ +H VK +D+FV + ++DMY+KC ++ A +F+ M +RDV WN+MI
Sbjct: 433 ILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMIS 492
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G A E+ F MR G+ + + + + + +H+ + G D
Sbjct: 493 GLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQ 552
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+V V ++ I YAKC ++ A L F + ++ +V+WN +I G + ++ + +
Sbjct: 553 NVYVGSSLIDMYAKCGNMDDARLFFNCMI--VKNIVAWNEMIHGYAQNGFGEKAVELFEY 610
Query: 249 MIYDGFRPDVTTVVSLLSSC 268
M+ +PD T +++L+ C
Sbjct: 611 MLTTKQKPDSVTFIAVLTGC 630
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + +A F++M++N + P ++ + +CA+LS + IH ++
Sbjct: 487 WNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVL 546
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + +++V ++++DMYAKC +D A F+ M +++ +WN MI G+AQ GF EK +
Sbjct: 547 KDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVE 606
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
LF M + D VT + + H+
Sbjct: 607 LFEYMLTTKQKPDSVTFIAVLTGCSHS 633
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%)
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ NV NA I + G + AR+L +P++ VSW T+IA A + EAL+++
Sbjct: 73 RPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRG 132
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
M++ L P T +VL AC L+ G L KV
Sbjct: 133 MLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKV 171
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 186/600 (31%), Positives = 321/600 (53%), Gaps = 17/600 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + AL L++RM D++PN + + + ACA + + IH I
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRIS 148
Query: 82 KSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFLEKV 139
+ D+ ++ +++ MYAKC L+ A +LF++M R V+SWNAMI +AQ G E+
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL---KSVHSFGIHIGVDADVSVCNTW 196
+ L+ +M + F +V+ +L LL + +H+ G + D+S+ N
Sbjct: 209 IRLYEDMDVEPSVRTFTSVLSA------CSNLGLLDQGRKIHALISSRGTELDLSLQNAL 262
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++ YA+C L A +F+ + R VVSW+++I D FD+++ FY M +G RP
Sbjct: 263 LTMYARCKCLDDAAKIFQRLPR--RDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRP 320
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T S+L +C L GR VH + G+ + + L+ +Y+ G +D AR LF
Sbjct: 321 NYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLF 380
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS-MISGCGQSGAL 375
D + +R WT +I GY+++G L L+ M+ +VP + S +IS C GA
Sbjct: 381 DQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAF 440
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ + + G+ + ++ +L++MYS+ G++ AR++F + + ++WTT+IAG
Sbjct: 441 ADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGY 500
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +GE AL L+ +M P+ +TF+ VL AC+HAG E+G F + Y ++P
Sbjct: 501 AKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPN 560
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ HYSC+ DLL R G+L +A + + +MP++ + W +LL A +IH++++ + A ++
Sbjct: 561 IAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQIT 620
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+L+P A YV ++N++A+ G G+A++R M VKK G S + + + F V D
Sbjct: 621 KLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGD 680
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 238/505 (47%), Gaps = 22/505 (4%)
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
A + D + IH I + +++F+ +V Y KC + A FD + ++ S
Sbjct: 33 ALRQCQDLESVRQIHDRISGAAS-ANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYS 91
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS-FG 181
W +M+ +AQ G L L+ M L + TV+G A+I A L K++HS
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGAC-ASIEA--LEEGKAIHSRIS 148
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
G+ DV + N+ ++ YAKC L+ A+ +F + G R+V SWN++I F++
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERM-SGRRSVSSWNAMIAAYAQSGHFEE 207
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
++ Y M P V T S+LS+C L QGR +H+ G +LD+S+ N L++
Sbjct: 208 AIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLT 264
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY++C +D A +F + R VSW+AMI+ +A+ DEA+ + M+ G P+ T
Sbjct: 265 MYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYT 324
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S++ C G L G+ + G K ++ AL+D+Y+ GS+ +AR LF +
Sbjct: 325 FASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 384
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP-NRVTFLAVLQACTHAG-FLEKG 479
+ WT +I G + G L+L+ +M P ++ + V+ AC G F +
Sbjct: 385 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADAR 444
Query: 480 WGYFNLMTKVYQVNPELNHY---SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
+ ++ + + ++ + + + ++ R G L+ A M + D W TL+
Sbjct: 445 QAHSDI-----EADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIA 498
Query: 537 ACKIH--RNIEIGEYVAYRLFELEP 559
H + +G Y L EP
Sbjct: 499 GYAKHGEHGLALGLYKEMELEGAEP 523
>gi|242062998|ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
gi|241932619|gb|EES05764.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
Length = 662
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 304/602 (50%), Gaps = 9/602 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L ++ + ++ N+ +R +AL L+ +M+ D +LTF F AKACA L
Sbjct: 68 LVQMPQPPPVSVSNTLLRSYTGLGFNRQALALYSQMRAFD----HLTFTFAAKACADLRR 123
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +HG + + F D +VQ +V MY +C + A +F + R SWN +I G
Sbjct: 124 RRHGRAVHGRALTAGFGGDGYVQNALVSMYMRCRDVVSAEAVFGALRSRTTVSWNTVITG 183
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G E+ L +F M G+ D TV+ + A A+ L + ++VH + G+
Sbjct: 184 CVKDGRAERALEVFETMVGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNY 243
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+V N I Y KC L+ A+ VF E+ + VVSW ++IG D +
Sbjct: 244 AAVKNALIDMYGKCRSLEDAKRVFD--EDSYDKDVVSWTAMIGAYVLNDHASKAFALGSE 301
Query: 249 MIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +P+ T+V LLS+C + + H+ I G D V L+ Y+KCG
Sbjct: 302 MLVTSEAQPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYAKCG 361
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+ + + RT +W A ISGY + +AL LF M A PD T+ S+I
Sbjct: 362 YMGMIDMVVEKGSRRTE-TWNAAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIP 420
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
+S L K G + + LI++Y+K G +G A ELF LPEK VV+
Sbjct: 421 AYAESADLVQAKNIHCCLLIRGCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEKDVVA 480
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WTT+IAG ++G A+ L+ +M+E+ + PN VT +++ +C+HAG +++G FN M
Sbjct: 481 WTTVIAGYGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRLFNDMR 540
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
V+ + P HY C+ D+LGR G+++EA +Q MP + +W LL AC +H N+E G
Sbjct: 541 GVHGLMPNAEHYLCLVDMLGRAGRIEEAYRLIQDMPFEPSTSVWSALLGACVLHENVEFG 600
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E A LFELEP + YV + +YA RW V +L +M+ + K PG S+V +
Sbjct: 601 EVAAKHLFELEPDNVGNYVLLGKVYAAADRWSDVQDLWRVMEGRGLHKDPGSSVVDAKSE 660
Query: 608 TC 609
C
Sbjct: 661 VC 662
>gi|6729044|gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
Length = 770
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 292/550 (53%), Gaps = 13/550 (2%)
Query: 76 IHGHIVKSPFWSD----------IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+H I+K+P + + + V +++ +YAKC +L A KLFD+MP RDV S N
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
+ GF + E L M G D T+ + + + K +H+ I G
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D ++SV N I++Y KC VF G+ R V++ ++I G + +D L
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSH--RNVITLTAVISGLIENELHEDGLRL 243
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M P+ T +S L++C + +V+G+ +H+ YG + ++ + + L+ MYSK
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSK 303
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG I+ A +F+ + VS T ++ G AQ G +EA++ F M AG D V ++
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ +L LGK + N V N LI+MYSKCG + D++ +F +P++
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW +MIA A +G + AL L+ +M L+++P VTFL++L AC+H G ++KG N
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M +V+ + P HY+C+ D+LGR G LKEA F+ S+P+K D IW LL AC H + E
Sbjct: 484 MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+GEY A +LF+ P S++ ++ +ANIY+ G+W A MK V K G S + I
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Query: 606 GKTCTFTVED 615
KT +F VED
Sbjct: 604 HKTHSFVVED 613
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 5/313 (1%)
Query: 32 KNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
+NE H+ L LF M++ + PN++T+ AC+ + Q IH + K S++
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+++ ++DMY+KC ++ A+ +F+ + D S ++VG AQ G E+ + F M G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
++ D V + + L L K +HS I + V N I+ Y+KC DL ++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
VFR + + R VSWNS+I +L Y M +P T +SLL +C
Sbjct: 413 TVFRRMPK--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSH 470
Query: 271 PEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WT 328
+ +GR L++ +G + +I M + G + A+ D + + W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 329 AMISGYAQKGDLD 341
A++ + GD +
Sbjct: 531 ALLGACSFHGDTE 543
>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Brachypodium distachyon]
Length = 697
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 187/593 (31%), Positives = 314/593 (52%), Gaps = 10/593 (1%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N+ +R V + ALLL ++ + P+ T + KACA L + + +H ++
Sbjct: 71 NALLRAHVRARQWCDALLLIPCLR---VRPDAFTLSLLLKACAMLPALAHGRALHALAIR 127
Query: 83 S-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S ++D FV +V MYAKC + + ++ + D+ +M+ G+ Q + L
Sbjct: 128 SCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEAL- 186
Query: 142 LFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
F++ +VG VT++ + AA K + ++ H+F I + D+ + N +
Sbjct: 187 EFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGF 246
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y + ++ A +F G+ E + VV+W+ ++ G ++L Y+ M+ G +P+
Sbjct: 247 YMRIGAVQAARRLFEGMTE--KDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAV 304
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
TVVS++ +C + +GR VH + G +L+++V L+ MY KC + A LF M
Sbjct: 305 TVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRM 364
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ V+W +ISG+ Q G DE++R+F M G PD VT++ +++ C +SG +
Sbjct: 365 SKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAF 424
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
Y G D + V AL+D+YSKCG++G A +F + EK VV W++MI+G ++G
Sbjct: 425 CLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHG 484
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+A++LF M+ ++PN +TF++VL AC+H+G +++G F MT+VY V P H+
Sbjct: 485 LGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHH 544
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
S M DLLGR G+L+EA + ++DA W LL AC+ H + E+ E VA +L +L+P
Sbjct: 545 SAMVDLLGRAGELQEAAKLLHGNG-RADAHTWCALLAACRAHHDTEMSEVVAAKLLKLDP 603
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
A Y + NIY W R +++ + K PG S V +N TFT
Sbjct: 604 DHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVELNNVMHTFT 656
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 148/326 (45%), Gaps = 3/326 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + + W+ + V + +AL +++M + I+PN +T + +AC+
Sbjct: 258 RLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAP 317
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
D + +H VK ++ V T +VDMY KC + A +LF +M +D +W +I
Sbjct: 318 DIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVIS 377
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF Q G ++ + +F M G D VT++ + A + + +H + + G
Sbjct: 378 GFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCD 437
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + Y+KC +L A VF E + VV W+S+I G ++ ++
Sbjct: 438 KIFVAAALVDLYSKCGNLGCAVRVFESAME--KDVVLWSSMISGYGVHGLGQQAVELFQM 495
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +P+ T VS+LS+C + +G R+ S YG + + ++ + + G
Sbjct: 496 MVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAG 555
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISG 333
++ A L G +W A+++
Sbjct: 556 ELQEAAKLLHGNGRADAHTWCALLAA 581
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 303/568 (53%), Gaps = 4/568 (0%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
++ N +TF + + + IH + +S D+FV T +V+ Y KC L A
Sbjct: 6 VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
K+FD MP R V +WN+MI ++ + +F M+ G + D VT + + A ++ +
Sbjct: 66 KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPE 125
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+L K V + D+ V I+ YA+C + A VF +++ + +++W++I
Sbjct: 126 NLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQ--KNLITWSAI 183
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I ++L ++R M +G P+ T +SLL+ P L + +H +G
Sbjct: 184 ITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 243
Query: 290 DLDVSVINTLISMYSKC--GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
D ++ N L+++Y +C G++D A + M ++ +W +I+GY G EAL +
Sbjct: 244 DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETY 303
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
++ D VT +S+++ C S +L GK + A GL +V+V NAL +MYSKC
Sbjct: 304 QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKC 363
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
GS+ +AR +F ++P ++ VSW M+ A +GE E L L +M + ++ N +TF++VL
Sbjct: 364 GSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVL 423
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
+C+HAG + +G YF+ + + + HY C+ DLLGR GKL+EA ++ MP + +
Sbjct: 424 SSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPE 483
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTM 587
W +LL AC++H++++ G+ A +L EL+P +++ V ++NIY+ G W A LR
Sbjct: 484 IVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRA 543
Query: 588 MKRNQVKKFPGQSLVHINGKTCTFTVED 615
M +VKK PG S + + K F V D
Sbjct: 544 MASRRVKKVPGISSIQVKNKVHEFRVRD 571
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 229/442 (51%), Gaps = 6/442 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WNS I + +A +F+RM+ + +TF I AC + + + +
Sbjct: 75 SVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVR 134
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I ++ F D+FV T ++ MYA+C + A ++F +M +++ +W+A+I FA G
Sbjct: 135 ESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCG 194
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L F M+ GI + VT + L L L +H G+D ++ N +
Sbjct: 195 EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALV 254
Query: 198 SAYAKCN--DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y +C +L +AE++ + ++E + + +WN +I G T + ++L Y+ + +
Sbjct: 255 NVYGRCETGELDVAEVILQEMDE--QQITAWNVLINGYTLHGRSREALETYQRLQLEAIP 312
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D T +S+L++C +L +G+++HS+ + G D DV V N L +MYSKCG +++AR +
Sbjct: 313 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 372
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M R+ VSW M+ YAQ G+ +E L+L ME G + +T +S++S C +G +
Sbjct: 373 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 432
Query: 376 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
G ++F + G++ L+D+ + G + +A + +P E +V+W +++
Sbjct: 433 AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLG 492
Query: 434 GCALNGEFVEALDLFHQMMELD 455
C ++ + +++ELD
Sbjct: 493 ACRVHKDLDRGKLAARKLLELD 514
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 166/327 (50%), Gaps = 9/327 (2%)
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ +G + +V T +++L+S V P+AL +G+ +HS LDV V L++ Y+KCG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ AR +FDGM R+ +W +MIS Y+ EA +F M+ GE D VT LS++
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C L+ GK + ++ V ALI MY++C S +A ++F + +K +++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ +I A +G EAL F M + + PNRVTF+++L T LE+ +L+
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE-LSRIHLLIT 239
Query: 489 VYQVNPELNHYSCMADLLGR--KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIE 545
+ ++ + + ++ GR G+L A +Q M + W L+ +H R+ E
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQITAWNVLINGYTLHGRSRE 298
Query: 546 IGEYVAYRLFELE--PHSAAPYVEMAN 570
E Y+ +LE P ++ + N
Sbjct: 299 ALE--TYQRLQLEAIPVDKVTFISVLN 323
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 307/587 (52%), Gaps = 9/587 (1%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
HKA+ LF + ++ + ++ + AC ++ DF ++IHG + +F+ +
Sbjct: 92 HKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLL 151
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+DMY KC+R+D A LF+ + D SWN++I G+A++G E++L L M G++ +
Sbjct: 152 IDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNA 211
Query: 156 VTV-MGLTQAAIHAKHL-SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
T+ L ++ ++ S K++H + + G+D D+ V + YAK L A +F
Sbjct: 212 FTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLF 271
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFD-----DSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
R + VV +N++I G + D ++L + M G +P T S++ C
Sbjct: 272 RTSPN--QNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKIC 329
Query: 269 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
EA G+ +H+H + D + +TLI +YS G + F+ VSWT
Sbjct: 330 NHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWT 389
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
MI+GYAQ G + AL LF+ + A+G+ PD + +M+S C A G+ YA
Sbjct: 390 TMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKT 449
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
G+ +V N+ I MY+K G++ A+ F + VVSW+ MI A +G +A++LF
Sbjct: 450 GIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLF 509
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
M + PN++TFL VL AC+H G +E+G Y+ M K Y + + H +C+ DLL R
Sbjct: 510 ELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSR 569
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEM 568
G+L +A +F+ + +W TLL C+I+++I G++VA +L EL+P ++ YV +
Sbjct: 570 AGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLL 629
Query: 569 ANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIY G +R +MK ++K PGQS + + + +F V D
Sbjct: 630 YNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGD 676
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 215/428 (50%), Gaps = 16/428 (3%)
Query: 57 FPFIAKACAKLSDF-------LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
FP + A KL F ++ ++ H H++K+ F +F+ +++Y+K + A
Sbjct: 5 FPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQ 64
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
KLFD+M +R V S+N +I G+ MGF K + LF R+ ++ D + G+ A K
Sbjct: 65 KLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIK 124
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+L K +H I G+ V + N I Y KC + A L+F +E VSWNS+
Sbjct: 125 DFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE--LDNVSWNSL 182
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV--CPEALVQGRLVHSHGIHY 287
I G +++ L M + G R + T+ S L SC + G+ +H + +
Sbjct: 183 ITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQ 242
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-----E 342
G DLD+ V L+ MY+K G + A LF ++ V + AMI+G+ Q D+D E
Sbjct: 243 GLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYE 302
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
AL+LF M+ G P T S+I C A E GK + C ++ + + + LI+
Sbjct: 303 ALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIE 362
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
+YS GS D + F + P+ +VSWTTMIAG A NG+F AL LF++++ +P+
Sbjct: 363 LYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFI 422
Query: 463 FLAVLQAC 470
+L AC
Sbjct: 423 ITTMLSAC 430
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 4/308 (1%)
Query: 28 EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS 87
E +DK A++AL LF +M++ I+P++ TF I K C + F Y + IH HI K S
Sbjct: 293 EDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQS 352
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D F+ +T++++Y+ + K F+ P D+ SW MI G+AQ G E L LFY +
Sbjct: 353 DEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELL 412
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G + D + + A + VH + + G+ V N+ IS YAK +L
Sbjct: 413 ASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLD 472
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A++ F I+ VVSW+ +I D++N + M G P+ T + +L++
Sbjct: 473 SAKITFEEIKN--PDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTA 530
Query: 268 CVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRV 325
C + +G R S Y ++V ++ + S+ G +D+ F+ + V
Sbjct: 531 CSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPV 590
Query: 326 SWTAMISG 333
W ++SG
Sbjct: 591 MWRTLLSG 598
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + I + AL LF + + +P+ + ACA ++ + +HG
Sbjct: 385 IVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHG 444
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ VK+ + VQ + + MYAK LD A F+++ + DV SW+ MI AQ G +
Sbjct: 445 YAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKD 504
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ LF M+ GI + +T +G+ A H
Sbjct: 505 AINLFELMKSYGIHPNQITFLGVLTACSHG 534
>gi|413938143|gb|AFW72694.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 663
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 307/602 (50%), Gaps = 9/602 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L ++ + ++++ N+ +R +AL L+ +M+ D +LTF F AKACA L
Sbjct: 69 LAQMPQPASVSVSNTLLRSYSGLGFHRQALALYSQMRHFD----HLTFTFAAKACAGLRL 124
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +HG + + F SD +VQ +V MY +C + A +F +P R SWN +I G
Sbjct: 125 RRHGRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITG 184
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G E+ L +F M G+ D +V+ + A A+ L ++VH + G+
Sbjct: 185 CVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKY 244
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
V+V N I Y KC L+ A VF E+ + VVSW +IG D +
Sbjct: 245 VAVKNALIDMYGKCGSLEDARRVFD--EDSYDKDVVSWTVMIGAYVLNDHASKAFALGSE 302
Query: 249 MIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +P+ T+ LLS+C + + H+ I G D+ V L+ Y+KCG
Sbjct: 303 MLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCG 362
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+ + + RT +W A ISGY Q+ +AL LF M A PD T+ S+I
Sbjct: 363 YMGVIDMVVEKGSRRTE-TWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIP 421
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
+S L G + + LID+Y+K G +G A ELF LPEK VV+
Sbjct: 422 AYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVA 481
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WTT+IAG ++G A+ L+ +M+EL + PN VT ++L +C+HAG +++G FN M
Sbjct: 482 WTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMH 541
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
V+ + P HY C+ D+LGR G+++EA ++ MP + +W +LL AC +H N+E G
Sbjct: 542 GVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFG 601
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E A LFELEP + YV + +YA RW V +LR +M+ + K PG +V +
Sbjct: 602 EVAAKHLFELEPDNVGNYVLLGKVYAAAERWSDVQHLRRVMEGMDLHKDPGYCVVDAKSE 661
Query: 608 TC 609
C
Sbjct: 662 VC 663
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 198/608 (32%), Positives = 305/608 (50%), Gaps = 13/608 (2%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK--ACAKL 67
L+ +R++T W +R AL LFR M + P+ +T + C
Sbjct: 98 LSSPHRNATT--WTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP 155
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
S +H +K + +FV T++D Y K L A ++F +M D+D ++NAM+
Sbjct: 156 S-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 208
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
+G ++ G + L LF MR GI A T + A HL L VH+ +
Sbjct: 209 MGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+V V N+ + Y+KC+ L +F + E R VS+N II + L +R
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPE--RDNVSYNVIIAAYAWNQCAATVLRLFR 326
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M GF V ++LS + G+ +H+ + G + + N LI MYSKCG
Sbjct: 327 EMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG 386
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+D+A+ F +++ +SWTA+I+GY Q G +EAL+LF M AG PD T S+I
Sbjct: 387 MLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIK 446
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
+ LG+ +Y G K +V + L+DMY+KCG + +A F +PE+ +S
Sbjct: 447 ASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS 506
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W +I+ A GE A+ +F M+ P+ VTFL+VL AC+H G ++ YF+LM
Sbjct: 507 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK 566
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
Y ++P HY+C+ D LGR G + + MP K+D IW ++L +C+IH N E+
Sbjct: 567 HQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 626
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
A +LF +EP A PYV ++NIYA G+W+ A ++ +M+ V+K G S V I K
Sbjct: 627 RVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 686
Query: 608 TCTFTVED 615
+F D
Sbjct: 687 IYSFASND 694
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 213/471 (45%), Gaps = 26/471 (5%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++ QM H +IF ++ Y+ L A LF P R+ +W M+
Sbjct: 65 MFDQMPH---------KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAH 115
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL----LKSVHSFGIHIGV 186
A G L LF M G+ D VTV + L+L + S+H F I G+
Sbjct: 116 AAAGRTSDALSLFRAMLGEGVIPDRVTVTTV---------LNLPGCTVPSLHPFAIKFGL 166
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D V VCNT + AY K L A VF +E + V++N+++ GC+ +L +
Sbjct: 167 DTHVFVCNTLLDAYCKHGLLAAARRVF--LEMHDKDAVTYNAMMMGCSKEGLHTQALQLF 224
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M G T S+L+ L+ G VH+ + L+V V N+L+ YSKC
Sbjct: 225 AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
+D R LFD M +R VS+ +I+ YA LRLF M+ G ++ +M+
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S G + +GK GL ++ NALIDMYSKCG + A+ F EK+ +
Sbjct: 345 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAI 404
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SWT +I G NG+ EAL LF M LRP+R TF ++++A + + G + +
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + S + D+ + G L EAL MP ++ W ++ A
Sbjct: 465 IRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS-WNAVISA 513
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 304/580 (52%), Gaps = 9/580 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEP---NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI 89
N+ ++ R+ + + P + + F + K+CA+ DF + H H VKS SD
Sbjct: 109 NDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCHFVKS-LPSDS 167
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRD-VASWNAMIVGFAQMGFLEKVLCLFYNMRL 148
FV T +VD YAK R+D A + FD++ + D V SW +MIV + Q + L LF MR
Sbjct: 168 FVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMRE 227
Query: 149 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKM 208
+ + TV L A L K VH F I G+ + + + ++ Y KC +++
Sbjct: 228 AFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQD 287
Query: 209 AELVFRGIEEGL--RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLS 266
A VF R +VSW ++I G + +L ++ + G P+ TV SLLS
Sbjct: 288 ACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLS 347
Query: 267 SCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS 326
SC V G+L+H + G D D V N L+ MY+KCG + AR +F+ M ++ VS
Sbjct: 348 SCAQLGNSVMGKLLHGLAVKCGLD-DHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVS 406
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W ++ISG+ Q G+ EAL LF M PD VTV+ ++S C G L LG A
Sbjct: 407 WNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLAL 466
Query: 387 SGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
GL ++ V AL++ Y+KCG AR +F ++ EK V+W MI G + G+ +L
Sbjct: 467 KDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSL 526
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
LF M+E + PN V F +L AC+H+G + +G FNLM P + HY+CM D+
Sbjct: 527 TLFRDMLEELVEPNEVVFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDM 586
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPY 565
L R G L+EALDF++ MP++ ++G L C +H E+G ++ EL P A Y
Sbjct: 587 LARAGNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYY 646
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
V ++N+YA GRW V +R M+K+ + K PG S V ++
Sbjct: 647 VLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSSVEMD 686
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 228/452 (50%), Gaps = 10/452 (2%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
++I+ + + W S I V + A + L LF RM++ ++ N T + AC KL+
Sbjct: 190 FDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNW 249
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP----DRDVASWNA 125
+ +HG ++K+ + ++ T++++MY KC + A K+FD+ DRD+ SW A
Sbjct: 250 LHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTA 309
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MIVG++Q G+ L LF + + GI + VTV L + + + K +H + G
Sbjct: 310 MIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCG 369
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+D D V N + YAKC + A VF + E + VVSWNSII G + ++LN
Sbjct: 370 LD-DHPVRNALVDMYAKCGVVSDARCVFEAMLE--KDVVSWNSIISGFVQSGEAYEALNL 426
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYS 304
+R M + F PD TVV +LS+C L G VH + G + + T L++ Y+
Sbjct: 427 FRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYA 486
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCGD +AR +FD M ++ V+W AMI GY +GD + +L LF M P+ V +
Sbjct: 487 KCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTT 546
Query: 365 MISGCGQSGALELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+++ C SG + G N C ++ ++DM ++ G++ +A + +P +
Sbjct: 547 ILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDFIERMPVQ 606
Query: 424 TVVS-WTTMIAGCALNGEFVEALDLFHQMMEL 454
VS + + GC L+ F +M+EL
Sbjct: 607 PSVSVFGAFLHGCGLHSRFELGGAAIKKMLEL 638
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 239/501 (47%), Gaps = 14/501 (2%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
L+ + P+ TF ++++ C L + +H + +D+ + T ++ +YA
Sbjct: 21 LYHHHGQKQQPPSPPTF-YLSRLCTNLPSL---KTLHASFLIHGLTNDLLLSTKLLSLYA 76
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV--GIQADFVTV 158
+L A K+F+ +P RD+ + MI + V+ L+ MRL D+V
Sbjct: 77 SFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLF 136
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ ++ ++ L H + + +D V + AYAK + A F I E
Sbjct: 137 SIVFKSCAESRDFQTLTITHCHFVK-SLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHE 195
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
VVSW S+I D + L + M + TV SL+S+C L QG+
Sbjct: 196 N-DDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGK 254
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD----GMCDRTRVSWTAMISGY 334
VH I G ++ + +L++MY KCG+I A +FD DR VSWTAMI GY
Sbjct: 255 WVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGY 314
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
+Q+G AL LF + +G +P+ VTV S++S C Q G +GK A GL D+
Sbjct: 315 SQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLDDHP 374
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
V NAL+DMY+KCG + DAR +F A+ EK VVSW ++I+G +GE EAL+LF +M
Sbjct: 375 -VRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLE 433
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
P+ VT + +L AC G L G L K V + + + + + G +
Sbjct: 434 LFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARA 493
Query: 515 ALDFVQSMPIKSDAGIWGTLL 535
A SM K +A WG ++
Sbjct: 494 ARMVFDSMGEK-NAVTWGAMI 513
>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 584
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 279/533 (52%), Gaps = 7/533 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM-- 133
IH V ++ T ++ A C L A ++FD P RD WN ++ A
Sbjct: 42 IHARAVLLGVAANPAFATRLLAAAAPCS-LAYARRVFDAAPRRDAYMWNTLLRAHAHAQA 100
Query: 134 ---GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
L L+ MR G+ D T + A A+ L ++ H + + D
Sbjct: 101 PAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRFALAEDG 160
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEE-GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + I+ Y + D+ AE VF G RTVVSW +++ G F ++ + M
Sbjct: 161 FVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAVTVFGAM 220
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+ G P+ T++S L E L G +VH + GFD ++ ++N LI+MY KCG I
Sbjct: 221 VAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIAMYGKCGSI 280
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+A+ LFDGM T VSW M++ Y Q GD A++ F M + D VT++S++S C
Sbjct: 281 AAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTLVSVLSAC 340
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ GALE GKW A S GL + + N L+DMY+KCG I AR+ F L E VVSW+
Sbjct: 341 TRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVVSWS 400
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MI+ A +GE EAL+LF M + ++PN T AVL AC H+G +++G FN + +
Sbjct: 401 AMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAIFNSIVRD 460
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Y ++P L +Y+CM D+LGR G+L EA + ++ M ++ D IWG L C++H N+E+ E+
Sbjct: 461 YHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHGNLELAEF 520
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
VA LF+ + YV MAN+Y G + R MK ++KK G SLV
Sbjct: 521 VAKDLFQSGSNDVTFYVLMANMYFEAGMLEDAERTRRAMKEMELKKTAGHSLV 573
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 235/488 (48%), Gaps = 57/488 (11%)
Query: 22 WNSQIR-----EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
WN+ +R +A + A AL L++RM+ + P+ T+P + ACA +
Sbjct: 88 WNTLLRAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAA 147
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF---DKMPDRDVASWNAMIVGFAQM 133
HG V+ D FV + ++ MY + + A ++F + R V SW AM+ G+AQ
Sbjct: 148 HGDAVRFALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQN 207
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ + +F M G+ + +T++ + L+ + VH F + +G DA++ +
Sbjct: 208 CLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLV 267
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ Y KC + A+ +F G+ TVVSWN+++ ++ F+ M+ +
Sbjct: 268 NALIAMYGKCGSIAAAKELFDGMAA--HTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEK 325
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D T+VS+LS+C AL G+ VH G D D + N L+ MY+KCG+I AR
Sbjct: 326 VGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYAR 385
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
FDG+ + VSW+AMIS YA G+ +EAL LF AM+ G P+ T+ +++ CG SG
Sbjct: 386 QAFDGLREPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSG 445
Query: 374 ALELG--------------KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
++ G +NYAC ++DM + G + +A E+
Sbjct: 446 LVDEGLAIFNSIVRDYHISPTLENYAC-------------MVDMLGRAGRLVEAYEIIRG 492
Query: 420 L---PEKTVVSWTTMIAGCALNG-----EFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+ P+K + W + GC L+G EFV A DLF N VTF VL A
Sbjct: 493 MSMQPDKCI--WGAFLGGCRLHGNLELAEFV-AKDLFQS------GSNDVTFY-VLMANM 542
Query: 472 H--AGFLE 477
+ AG LE
Sbjct: 543 YFEAGMLE 550
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 186/386 (48%), Gaps = 19/386 (4%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L +H+ + +GV A+ + ++A A C+ L A VF R WN+++
Sbjct: 36 LRALLPIHARAVLLGVAANPAFATRLLAAAAPCS-LAYARRVFDAAPR--RDAYMWNTLL 92
Query: 231 GGCTY-----GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
+ G +L Y+ M G PD T +L +C A GR H +
Sbjct: 93 RAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAV 152
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLF---DGMCDRTRVSWTAMISGYAQKGDLDE 342
+ D V + LI+MY + GD+ A +F + RT VSWTAM++GYAQ +
Sbjct: 153 RFALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQ 212
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A+ +F AM A G +P+ +T++S + L G+ + G N+ + NALI
Sbjct: 213 AVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIA 272
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY KCGSI A+ELF + TVVSW TM+A NG+ V A+ FH+M+ + + VT
Sbjct: 273 MYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVT 332
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL---KEALDFV 519
++VL ACT G LE G + + + + ++ + + + D+ + G++ ++A D +
Sbjct: 333 LVSVLSACTRQGALETG-KWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGL 391
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIE 545
+ + S W ++ A H E
Sbjct: 392 REPGVVS----WSAMISAYANHGEPE 413
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 165/408 (40%), Gaps = 38/408 (9%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T+ W + + +A+ +F M + PN +T +M
Sbjct: 191 ARTVVSWTAMVAGYAQNCLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEM 250
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+HG +VK F +++ + ++ MY KC + A +LFD M V SWN M+ + Q G
Sbjct: 251 VHGFVVKLGFDANLPLVNALIAMYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGD 310
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + F+ M + D VT++ + A L K VH G+D D + N
Sbjct: 311 GVRAIKFFHRMLSEKVGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNV 370
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC ++ A F G+ E VVSW+++I + +++LN + M G +
Sbjct: 371 LVDMYAKCGEIAYARQAFDGLRE--PGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVK 428
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARF 314
P+ T+ ++L +C H G D +++ N+++ Y ++
Sbjct: 429 PNSFTLTAVLVACG----------------HSGLVDEGLAIFNSIVRDYHISPTLE---- 468
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
++ M+ + G L EA + M PD + + GC G
Sbjct: 469 -----------NYACMVDMLGRAGRLVEAYEIIRGMSMQ---PDKCIWGAFLGGCRLHGN 514
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
LEL ++ G D V + +MY + G + DA A+ E
Sbjct: 515 LELAEFVAKDLFQSGSND-VTFYVLMANMYFEAGMLEDAERTRRAMKE 561
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W++ I + E +AL LF MK ++PN+ T + AC
Sbjct: 392 REPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGL 451
Query: 75 MIHGHIVKSPFWSDIFVQ-TTMVDMYAKCDRLDCAYKLFDKM---PDRDVASWNAMIVGF 130
I IV+ S MVDM + RL AY++ M PD+ + W A + G
Sbjct: 452 AIFNSIVRDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCI--WGAFLGGC 509
Query: 131 AQMGFLE 137
G LE
Sbjct: 510 RLHGNLE 516
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 305/581 (52%), Gaps = 3/581 (0%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+AL +++ M + +I + T + AC KL D +M+ + F D+ V T++
Sbjct: 50 QEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSL 109
Query: 96 VDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
+ ++AKC L+ A +F M RD+ S AMI + + G + L ++ MR G++ D
Sbjct: 110 IHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPD 169
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + A L K +H + ++SV N I+ YAKC LK ++ +F
Sbjct: 170 AFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFL 229
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
++ ++ VVSWN++I T D+ + + M G PD+ T S+L +C P+ L
Sbjct: 230 TMD--VKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRL 287
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
GR++H GFD D ++ N LISM+++CG ++SAR F + + +W M++ Y
Sbjct: 288 EDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAY 347
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
AQ +AL L+ M G PD T S++ C GAL GK+ + S G + +V
Sbjct: 348 AQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDV 407
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
++ AL++MY+KCGS+ DA++ F + K VVSW+ MIA A +G EAL+L H M
Sbjct: 408 ILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQ 467
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
+ N VT +VL AC+H G L +G YF +++ + + + + DLLGR G LKE
Sbjct: 468 GIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKE 527
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
A + +MP K TLL CK+H ++ G+ + R+ LEP + YV + N+YA
Sbjct: 528 AEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAA 587
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
GRWD VA LR M++ VK+ G S + K F+V D
Sbjct: 588 AGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGD 628
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 200/395 (50%), Gaps = 7/395 (1%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D F+ ++ MY KC + A ++FD++ R+ SW+ ++ + Q ++ L ++ M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
I D T+ + A + + V +G + DV V + I +AKC L+
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
AE VFR + +R ++S ++IG K D +L+ Y M G PD T ++L +
Sbjct: 121 EAESVFRSM-GAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179
Query: 268 CVCPEALVQGRLVHSHGI---HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
C P+ L+ G+ +H H + H+G ++SV N LI+MY+KCG + ++ LF M +
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHFG---NISVRNALITMYAKCGSLKDSKSLFLTMDVKDV 236
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
VSW AMI+ Y G +A LF M G PD+ T S++ C LE G+
Sbjct: 237 VSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVR 296
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
+ G + + N LI M+++CGS+ AR FY++ +K + +W TM+A A + +A
Sbjct: 297 ITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDA 356
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
L L+ M+ P+R TF +V+ +C G L +G
Sbjct: 357 LFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG 391
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 15/253 (5%)
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
D + N +I MY KC + AR +FD + R SW+ ++ Y Q EAL ++ M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
D T+ S+++ C + +E G+ A G + +V+V +LI +++KCG +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 412 DARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+A +F ++ + ++S T MI +G+ ALD + +M L P+ T+ A+L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHY------SCMADLLGRKGKLKEALDFVQSMPI 524
+ FL G +++ E H+ + + + + G LK++ +M +
Sbjct: 181 SSPDFLLDG-------KHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDV 233
Query: 525 KSDAGIWGTLLCA 537
K D W ++ A
Sbjct: 234 K-DVVSWNAMIAA 245
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 3/221 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ + ++ AL L++ M P+ TF + +CA L + IH
Sbjct: 337 LGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHE 396
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
F D+ + T +V+MYAKC L A K FD + ++DV SW+AMI AQ G E+
Sbjct: 397 CSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEE 456
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGVDADVSVCNTWI 197
L L + M L GI + VT + A H L + G++ D +I
Sbjct: 457 ALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFI 516
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC-TYGD 237
+ LK AE V + + + V+ +++GGC +GD
Sbjct: 517 DLLGRAGWLKEAEHVLHTMPFKV-SFVALVTLLGGCKVHGD 556
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 190/602 (31%), Positives = 308/602 (51%), Gaps = 17/602 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + AL LF+RM+ + P +T CA + +Q IH +
Sbjct: 196 WNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVR 252
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + V T + YA+ L A ++FD+ +RDV SWNAM+ +AQ G + +
Sbjct: 253 ESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAAL 312
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M GI VT L A+ L + +H + G+D D+ + N + Y
Sbjct: 313 LFARMLHEGISPSKVT---LVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYT 369
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C + A +F+ I VSWN++I G + + ++ ++ M +G P T
Sbjct: 370 RCGSPEEARHLFKRIPC---NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATY 426
Query: 262 VSLLSSCVC-PE---ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID--SARFL 315
++LL + PE A+ +GR +HS + G+ + ++ ++ MY+ CG ID +A F
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486
Query: 316 FDGMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
M DR V SW A+IS +Q G AL F M+ G P+ +T ++++ C + A
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAA 546
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
L G+ ++ G++ N+ V AL MY +CGS+ ARE+F + E+ VV + MIA
Sbjct: 547 LTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIA 606
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
+ NG EAL LF +M + RP+ +F++VL AC+H G ++GW F M + Y +
Sbjct: 607 AYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIA 666
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P +HY+C D+LGR G L +A + ++ M +K +W TLL AC+ +R+++ G
Sbjct: 667 PSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSM 726
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+ EL+P + YV ++NI A G+WD A +RT M+ ++K G+S + I + F
Sbjct: 727 VRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVA 786
Query: 614 ED 615
D
Sbjct: 787 GD 788
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 262/525 (49%), Gaps = 22/525 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + +A +A+ +F RM++ + + +TF + KACA+L D + IH IV
Sbjct: 96 WTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIV 155
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + ++ +Y C + A LF+KM +RD+ SWNA I AQ G L L
Sbjct: 156 ESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALE 214
Query: 142 LFYNMRLVGIQADFVT-VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M+L G++ +T V+ LT A + +++H G++ + V SAY
Sbjct: 215 LFQRMQLEGVRPARITLVIALTVCAT----IRQAQAIHFIVRESGLEQTLVVSTALASAY 270
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A+ L A+ VF E R VVSWN+++G ++ + M+++G P T
Sbjct: 271 ARLGHLYQAKEVFDRAAE--RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM- 319
+V+ + C +L GR++H + G D D+ + N L+ MY++CG + AR LF +
Sbjct: 329 LVNASTGC---SSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP 385
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG----QSGAL 375
C+ VSW MI+G +QKG + A+ LF M+ G P T L+++ ++ A+
Sbjct: 386 CN--AVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY--ALPEK-TVVSWTTMI 432
G+ + S G + A++ MY+ CG+I +A F A+ ++ VVSW +I
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAII 503
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+ + +G AL F +M + PN++T +AVL AC A L +G + + + +
Sbjct: 504 SSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHL-RHSGM 562
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
L + +A + GR G L+ A + + + ++ D I+ ++ A
Sbjct: 563 ESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 204/403 (50%), Gaps = 14/403 (3%)
Query: 69 DFLYSQ--MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
D L SQ IH IV ++ ++ +Y KC+ L ++F ++ RD ASW +
Sbjct: 42 DRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTI 99
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I + + G ++ + +F+ M+ G++ D VT + + +A LS +S+H++ + G+
Sbjct: 100 ITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGL 159
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
+ N + Y C + A L+F +E R +VSWN+ I +L +
Sbjct: 160 KGKSVLANLLLHIYGSCGCVASAMLLFEKME---RDLVSWNAAIAANAQSGDLGIALELF 216
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
+ M +G RP T+V L+ C + Q + +H G + + V L S Y++
Sbjct: 217 QRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARL 273
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + A+ +FD +R VSW AM+ YAQ G + EA LF M G P VT+++
Sbjct: 274 GHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNAS 333
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
+GC +L G+ A GL ++++ NAL+DMY++CGS +AR LF +P V
Sbjct: 334 TGC---SSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAV 389
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
SW TMIAG + G+ A++LF +M + P R T+L +L+A
Sbjct: 390 SWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
RP +V LL + L QGR +H+ + G + ++ N L+ +Y KC +
Sbjct: 28 RP--AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEE 83
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F + R SWT +I+ Y + G A+ +F M+ G D VT L+++ C + G
Sbjct: 84 VFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGD 143
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L G+ + GLK ++ N L+ +Y CG + A LF + E+ +VSW IA
Sbjct: 144 LSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAA 202
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A +G+ AL+LF +M +RP R+T + L C
Sbjct: 203 NAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCA 239
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++ ++ G L G+ S GL++ + N L+ +Y KC S+GD E+F L
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ SWTT+I +G+ A+ +FH+M + +R + VTFLAVL+AC G L +G
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 482 YFNLMTKVYQVNPELNHYSCMADLL 506
+ V L S +A+LL
Sbjct: 150 IH-----AWIVESGLKGKSVLANLL 169
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 181/483 (37%), Positives = 262/483 (54%), Gaps = 43/483 (8%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND-------LKMAELVFRGIEEGLRTV 223
L+ LK +H++ I + DV + I A C D + A +F I+ +
Sbjct: 30 LTHLKIIHAYMIRTHIICDVFAASRLI---AFCVDPSSGTSLIDYASRIFSQIQNP--NL 84
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
+N++I G + D + +FY G PD T L+ SC + G H H
Sbjct: 85 FIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGH 144
Query: 284 GIHYGFDLDVSVINTLISMYS-------------------------------KCGDIDSA 312
I +GF+ DV V N+L+ MY+ KCGD++SA
Sbjct: 145 IIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESA 204
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R LFD M ++ V+W+ MISGYAQ D+A+ LF +++ G + ++S+IS C
Sbjct: 205 RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL 264
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
GALELG+ +Y G+ N+++ AL+DMY++CGSI A +F LPE+ +SWT +I
Sbjct: 265 GALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALI 324
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
AG A++G +L F M+E L P +TF AVL AC+H G +E+G+ F M + ++V
Sbjct: 325 AGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRV 384
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P L HY CM DLLGR GKL+EA FV MP+K +A +WG LL AC+IH+N EIGE V
Sbjct: 385 EPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGK 444
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
L +L P + YV ++NIYA W+ V +R MMK +KK PG SL+ ++G+ FT
Sbjct: 445 ILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFT 504
Query: 613 VED 615
+ D
Sbjct: 505 IGD 507
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/480 (22%), Positives = 216/480 (45%), Gaps = 60/480 (12%)
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTM----VDMYAKCDRLDCAYKLFDKMPDRDVASW 123
SD + ++IH +++++ D+F + + VD + +D A ++F ++ + ++ +
Sbjct: 28 SDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIF 87
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NAMI G + ++ + + G+ D +T L ++ +S+ H I
Sbjct: 88 NAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIK 147
Query: 184 IGVDADVSVCNTWISAYA-------------------------------KCNDLKMAELV 212
G + DV V N+ + YA KC D++ A +
Sbjct: 148 HGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKL 207
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + E + +V+W+++I G + FD ++ ++ + G R + T +VS++SSC
Sbjct: 208 FDQMPE--KNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLG 265
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G H + + G L++ + L+ MY++CG ID A ++F+ + +R +SWTA+I+
Sbjct: 266 ALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIA 325
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLK 391
G A G + +L+ F M AG P +T +++S C G +E G + F++ ++
Sbjct: 326 GLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVE 385
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ ++D+ + G + +A +P K W ++ C + H+
Sbjct: 386 PRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRI-----------HK 434
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
E+ R ++ ++Q L + GY+ L++ +Y E + M ++ KG
Sbjct: 435 NAEIGERVGKI----LIQ------LLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKG 484
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 33/278 (11%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ IR +A + + ++ + P+NLTFPF+ K+C KL HGHI+
Sbjct: 87 FNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHII 146
Query: 82 KSPFWSDIFVQTTMVDMYA-------------------------------KCDRLDCAYK 110
K F D++VQ ++V MYA KC ++ A K
Sbjct: 147 KHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARK 206
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD+MP++++ +W+ MI G+AQ +K + LF ++ G++A+ ++ + + H
Sbjct: 207 LFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGA 266
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L + H + + G+ ++ + + YA+C + A VF + E R +SW ++I
Sbjct: 267 LELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPE--RDTLSWTALI 324
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
G + SL ++ M+ G P T ++LS+C
Sbjct: 325 AGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSAC 362
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I N KA+ LF+ ++ + N + +CA L + H ++V
Sbjct: 219 WSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVV 278
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ ++ + T +VDMYA+C +D A +F+ +P+RD SW A+I G A G+ E+ L
Sbjct: 279 KNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLK 338
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
F M G+ +T + A H
Sbjct: 339 YFATMVEAGLTPRDITFTAVLSACSHG 365
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 204/590 (34%), Positives = 304/590 (51%), Gaps = 13/590 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK----NDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
W + I V E+ + L M + + PN+ T +AC L + + +H
Sbjct: 184 WTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLH 243
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G++VK V + + MY+KC + A LF ++P++DV SW ++I + + G +
Sbjct: 244 GYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLIT 303
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF M G+Q D + V + + ++ K+ H+ V + N I
Sbjct: 304 EAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALI 363
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWN-SIIGGCTYGDKFDDSLNFYRHM-IYDGFR 255
S Y K + A VFR + + R SWN ++G C G L YR M + D +
Sbjct: 364 SMYGKFEMVDSAGRVFRLLHQ--RDADSWNLMVVGYCKAGCDVK-CLELYREMQLRDKYE 420
Query: 256 --PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
++VS +SSC L GR H + I + D D SV N LI MY +CG D A
Sbjct: 421 FWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHAC 480
Query: 314 FLFD-GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F V+W +IS YA G + A+ L+ M G P+ T++++IS C
Sbjct: 481 KIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANL 540
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
ALE G+ +Y G +V + ALIDMY+KCG +G AR +F ++ + VV+W MI
Sbjct: 541 VALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMI 600
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G ++GE +AL+LF +M ++PN VTFLA+L A H+G LE+G F M K Y +
Sbjct: 601 SGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGK-YSL 659
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P L HY+CM DLLG+ G L+EA D V +MPI+ D GIWGTLL ACK+H N E+G +A
Sbjct: 660 EPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAK 719
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ F +P + Y+ ++N Y +WD + LR MK V+K G S V
Sbjct: 720 KAFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGVQKGVGWSAV 769
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 246/537 (45%), Gaps = 26/537 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS IR ++ AL RRM + P+ T P A A A+L +H + V
Sbjct: 79 WNSLIRTHHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCV 138
Query: 82 KSPFW----SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + V +++V MYA+C + A K+F++MP+RDV +W A+I G + G
Sbjct: 139 RYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESG 198
Query: 138 KVLCLFYNM-RLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L M RL G ++ + T+ +A L+ + +H + + +G+ V
Sbjct: 199 EGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVI 258
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ S Y+KC + A +F + E + VVSW S+IG +++ ++ M+ G
Sbjct: 259 SALFSMYSKCYSTEDACALFLELPE--KDVVSWTSLIGIYCRRGLITEAMELFQQMMESG 316
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD V +LS + G+ H+ F V + N LISMY K +DSA
Sbjct: 317 LQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAG 376
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-----VPDLVTVLSMISG 368
+F + R SW M+ GY + G + L L+ M+ + V D +++S IS
Sbjct: 377 RVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVAD--SLVSAISS 434
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKTVVS 427
C + L LG+ Y+ L ++ V N LI MY +CG A ++F A + VV+
Sbjct: 435 CSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVT 494
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---WGYFN 484
W T+I+ A G A+ L+ QM+ L PN T + V+ AC + LE+G Y
Sbjct: 495 WNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVK 554
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
M Y V+ + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 555 EMGWDYDVSIN----TALIDMYAKCGQLGIARRIFDSM-LQHDVVAWNVMISGYGMH 606
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
VH+ + G + L+S YS G A F W ++I + D
Sbjct: 32 VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL----KDNVM 395
AL M A+G P T S + GAL +G Y GL D+V
Sbjct: 92 FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVA 151
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL- 454
V ++L+ MY++CG++ DA ++F +PE+ VV+WT +I+GC NGE E L +M+ L
Sbjct: 152 VASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA 211
Query: 455 ---DLRPNRVTFLAVLQA-----------CTHAGFLEKGWG--------YFNLMTKVYQV 492
+RPN T + L+A C H ++ G G F++ +K Y
Sbjct: 212 GDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYST 271
Query: 493 N---------PELN--HYSCMADLLGRKGKLKEALDFVQSM 522
PE + ++ + + R+G + EA++ Q M
Sbjct: 272 EDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQM 312
>gi|42563517|ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g05340
gi|332640702|gb|AEE74223.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 658
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 292/550 (53%), Gaps = 13/550 (2%)
Query: 76 IHGHIVKSPFWSD----------IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+H I+K+P + + + V +++ +YAKC +L A KLFD+MP RDV S N
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
+ GF + E L M G D T+ + + + K +H+ I G
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D ++SV N I++Y KC VF G+ R V++ ++I G + +D L
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSH--RNVITLTAVISGLIENELHEDGLRL 243
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M P+ T +S L++C + +V+G+ +H+ YG + ++ + + L+ MYSK
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSK 303
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG I+ A +F+ + VS T ++ G AQ G +EA++ F M AG D V ++
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ +L LGK + N V N LI+MYSKCG + D++ +F +P++
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW +MIA A +G + AL L+ +M L+++P VTFL++L AC+H G ++KG N
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M +V+ + P HY+C+ D+LGR G LKEA F+ S+P+K D IW LL AC H + E
Sbjct: 484 MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+GEY A +LF+ P S++ ++ +ANIY+ G+W A MK V K G S + I
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Query: 606 GKTCTFTVED 615
KT +F VED
Sbjct: 604 HKTHSFVVED 613
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 5/313 (1%)
Query: 32 KNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
+NE H+ L LF M++ + PN++T+ AC+ + Q IH + K S++
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+++ ++DMY+KC ++ A+ +F+ + D S ++VG AQ G E+ + F M G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
++ D V + + L L K +HS I + V N I+ Y+KC DL ++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
VFR + + R VSWNS+I +L Y M +P T +SLL +C
Sbjct: 413 TVFRRMPK--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSH 470
Query: 271 PEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WT 328
+ +GR L++ +G + +I M + G + A+ D + + W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 329 AMISGYAQKGDLD 341
A++ + GD +
Sbjct: 531 ALLGACSFHGDTE 543
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 306/598 (51%), Gaps = 9/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + K L+F M+ + + P+ T + CA F + IH +
Sbjct: 214 WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCL 273
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S S + V +V+MY+ +L A LF M RD+ SWN MI + Q L
Sbjct: 274 RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALK 333
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ + +T A L K VH+ + + + ++ V N+ I+ Y
Sbjct: 334 TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYG 393
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KCN ++ AE VF+ + +VS+N +IGG + ++ + M G +P+ T+
Sbjct: 394 KCNSMEDAEKVFQSMPT--HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITM 451
Query: 262 VSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++ S L GR +H++ I GF D V N+LI+MY+KCG+++S+ +F+ +
Sbjct: 452 INIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSIT 511
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ VSW A+I+ Q G +EAL+LF M+ AG D V + +S C +LE G
Sbjct: 512 NKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQ 571
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS---WTTMIAGCAL 437
GL + V NA +DMY KCG + E+ +P++ + W T+I+G A
Sbjct: 572 LHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQQCWNTLISGYAK 628
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G F EA + F QM+ +P+ VTF+A+L AC+HAG ++KG Y+N M + V+P +
Sbjct: 629 YGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIK 688
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
H C+ DLLGR G+ EA F++ MP+ + IW +LL + + H+N+EIG A +L EL
Sbjct: 689 HCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLEL 748
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+P + YV ++N+YA RW V LR+ MK + K P S + + + TF + D
Sbjct: 749 DPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGD 806
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 237/506 (46%), Gaps = 17/506 (3%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL +R+M+++ + N F + C L + + + ++ S + + V +++
Sbjct: 128 EALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLI 187
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
M+ R+ A KLFD+M + D SWNAMI ++ G K +F +MR G++ D
Sbjct: 188 TMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDAT 247
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ L + H S +HS + +D+ V+V N ++ Y+ L AE +F +
Sbjct: 248 TLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 307
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R ++SWN++I D+L + + P+ T S L +C P AL+
Sbjct: 308 SR--RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 365
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G++VH+ + ++ V N+LI+MY KC ++ A +F M VS+ +I GYA
Sbjct: 366 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 425
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE-LGKWFDNYACSGGLKDNVM 395
D +A+++F M +AG P+ +T++++ S L G+ Y G +
Sbjct: 426 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 485
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V N+LI MY+KCG++ + +F ++ K +VSW +IA G EAL LF M
Sbjct: 486 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAG 545
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMADLLGRK 509
+ +RV L +C LE+G L K Y VN + D+ G+
Sbjct: 546 NKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM-------DMYGKC 598
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLL 535
GK+ E L V I+ W TL+
Sbjct: 599 GKMDEMLQVVPDQAIRPQQ-CWNTLI 623
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 217/455 (47%), Gaps = 11/455 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL---SDFLYSQ 74
T + W + + V A + R M++ + + + AC +
Sbjct: 5 TPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGA 64
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++ ++++ T ++ +Y + A +LF +MP+R+V SW A++V + G
Sbjct: 65 AIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNG 124
Query: 135 FLEKVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+LE+ L + MR G+ + F TV+ L ++ + L V S I G+ VS
Sbjct: 125 YLEEALRAYRQMRRDGVPCNANAFATVVSLC-GSLENEVPGL--QVASQVIVSGLQNQVS 181
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N+ I+ + + AE +F +EE +SWN++I ++ + M +
Sbjct: 182 VANSLITMFGNLGRVHDAEKLFDRMEE--HDTISWNAMISMYSHQGICSKCFLVFSDMRH 239
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G RPD TT+ SL+S C + G +HS + D V+VIN L++MYS G +
Sbjct: 240 HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A FLF M R +SW MIS Y Q + +AL+ + E P+ +T S + C
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSS 359
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
GAL GK L+ N++V N+LI MY KC S+ DA ++F ++P +VS+ +
Sbjct: 360 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVL 419
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
I G A+ + +A+ +F M ++PN +T + +
Sbjct: 420 IGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 454
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 184/412 (44%), Gaps = 6/412 (1%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA---KHL 171
M DR ++W + G + G + MR G+ + L A + +
Sbjct: 1 MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ ++H+ G+ +V + + Y + A+ +F + E R VVSW +++
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPE--RNVVSWTALMV 118
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ +++L YR M DG + +++S C E V G V S I G
Sbjct: 119 ALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN 178
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
VSV N+LI+M+ G + A LFD M + +SW AMIS Y+ +G + +F M
Sbjct: 179 QVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMR 238
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G PD T+ S++S C S G + L +V V NAL++MYS G +
Sbjct: 239 HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
DA LF+ + + ++SW TMI+ N +AL Q+ + PN +TF + L AC+
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 358
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
G L G ++ ++ + L + + + G+ +++A QSMP
Sbjct: 359 SPGALIDGKMVHAIVLQL-SLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 409
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I V +AL LF M+ + + + +CA L+ +HG
Sbjct: 515 IVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG 574
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+KS SD +V +DMY KC ++D ++ R WN +I G+A+ G+ ++
Sbjct: 575 LGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKE 634
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSV-HSFGIHIGV 186
F M G + D+VT + L A HA K + S+ SFG+ G+
Sbjct: 635 AEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGI 687
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/608 (32%), Positives = 305/608 (50%), Gaps = 13/608 (2%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK--ACAKL 67
L+ +R++T W +R AL LFR M + P+ +T + C
Sbjct: 98 LSSPHRNATT--WTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP 155
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
S +H +K + +FV T++D Y K L A ++F +M D+D ++NAM+
Sbjct: 156 S-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 208
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
+G ++ G + L LF MR GI A T + A HL L VH+ +
Sbjct: 209 MGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+V V N+ + Y+KC+ L +F + E R VS+N II + L +R
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPE--RDNVSYNVIIAAYAWNQCAATVLRLFR 326
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M GF V ++LS + G+ +H+ + G + + N LI MYSKCG
Sbjct: 327 EMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG 386
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+D+A+ F +++ +SWTA+I+GY Q G +EAL+LF M AG PD T S+I
Sbjct: 387 MLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIK 446
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
+ LG+ +Y G K +V + L+DMY+KCG + +A F +PE+ +S
Sbjct: 447 ASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS 506
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W +I+ A GE A+ +F M+ P+ VTFL+VL AC+H G ++ YF+LM
Sbjct: 507 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK 566
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
Y ++P HY+C+ D LGR G + + MP K+D IW ++L +C+IH N E+
Sbjct: 567 HQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 626
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
A +LF +EP A PYV ++NIYA G+W+ A ++ +M+ V+K G S V I K
Sbjct: 627 RVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 686
Query: 608 TCTFTVED 615
+F D
Sbjct: 687 IYSFASND 694
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 210/467 (44%), Gaps = 18/467 (3%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++ QM H +IF ++ Y+ L A LF P R+ +W M+
Sbjct: 65 MFDQMPH---------KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAH 115
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A G L LF M G+ D VTV + + S+H F I G+D V
Sbjct: 116 AAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHV 170
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
VCNT + AY K L A VF +E + V++N+++ GC+ +L + M
Sbjct: 171 FVCNTLLDAYCKHGLLAAARRVF--LEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G T S+L+ L+ G VH+ + L+V V N+L+ YSKC +D
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
R LFD M +R VS+ +I+ YA LRLF M+ G ++ +M+S G
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ +GK GL ++ NALIDMYSKCG + A+ F EK+ +SWT
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTA 408
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I G NG+ EAL LF M LRP+R TF ++++A + + G + + +
Sbjct: 409 LITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS- 467
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ S + D+ + G L EAL MP ++ W ++ A
Sbjct: 468 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS-WNAVISA 513
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/446 (39%), Positives = 257/446 (57%), Gaps = 1/446 (0%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+S+ +HS + +G+ +D V N+ I+ Y+ C+ A V +G VSWN+II
Sbjct: 109 VSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVLDSAPQGACDTVSWNTII 168
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G G + +L + M+ + D T+++ L + + GRL HS + G
Sbjct: 169 SGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAG 228
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
++ + ++LISMY+KCG ++ AR +F GM +R V WT+MISGY Q G EA+ LF M
Sbjct: 229 INCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDM 288
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G D T+ +++S C Q GAL+LG++ Y GL + V N+LIDMYSKCG I
Sbjct: 289 QITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYSKCGDI 348
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQA 469
A E+F L ++ V SWT MI G +NG EALDLF QM E + PN VTFL VL +
Sbjct: 349 NKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTS 408
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
C+H G +E+G+ YF M+ VY++ P + HY CM DLLGR L EA F+++MPI D
Sbjct: 409 CSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPDVV 468
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
+W +LL AC+ + + E+VA R+ ELEP A +V ++N+YA RW V LRT M
Sbjct: 469 VWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVYATTSRWVDVNELRTSMD 528
Query: 590 RNQVKKFPGQSLVHINGKTCTFTVED 615
+++ K PG S + ++G F D
Sbjct: 529 NSRMSKQPGCSFIEVDGCVHEFFAGD 554
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 203/408 (49%), Gaps = 7/408 (1%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+N + A ++L +H VK SD FV ++++MY+ C A ++
Sbjct: 92 DNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVL 151
Query: 113 DKMPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
D P D SWN +I G+ + G K L F M + D VT++ A+ A
Sbjct: 152 DSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGK 211
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ + + HS + G + + ++ IS YAKC ++ A VF G+ E R VV W S+I
Sbjct: 212 VKVGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHE--RNVVCWTSMI 269
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G T KF +++N +R M G + D T+ +++SSC AL GR VH++ +G
Sbjct: 270 SGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLG 329
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
++SV N+LI MYSKCGDI+ A +F G+ R SWTAMI G+ G EAL LF M
Sbjct: 330 KELSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQM 389
Query: 351 EAAGEV-PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
E G+V P+ VT L +++ C G +E G +F + L + ++D+ +
Sbjct: 390 EGEGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAK 449
Query: 409 SIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +A + +P VV W +++ C GE A + +++EL+
Sbjct: 450 LLTEAEQFIKNMPIAPDVVVWRSLLFACRACGEVGLAEFVAERILELE 497
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 10/268 (3%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I + +KAL F +M K + +++T A AK ++ H +
Sbjct: 163 SWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLV 222
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V + + ++ ++++ MYAKC ++ A K+F M +R+V W +MI G+ Q+G ++ +
Sbjct: 223 VVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAV 282
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF +M++ G++ D T+ + + L L + VH++ G+ ++SV N+ I Y
Sbjct: 283 NLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMY 342
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVT 259
+KC D+ A +F G+ + R V SW ++I G T ++L+ + M +G P+
Sbjct: 343 SKCGDINKAHEIFCGLTK--RDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEV 400
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHY 287
T + +L+SC G LV G HY
Sbjct: 401 TFLGVLTSC------SHGGLVE-QGFHY 421
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 306/598 (51%), Gaps = 9/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + K L+F M+ + + P+ T + CA F + IH +
Sbjct: 516 WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCL 575
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S S + V +V+MY+ +L A LF M RD+ SWN MI + Q L
Sbjct: 576 RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALK 635
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ + +T A L K VH+ + + + ++ V N+ I+ Y
Sbjct: 636 TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYG 695
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KCN ++ AE VF+ + +VS+N +IGG + ++ + M G +P+ T+
Sbjct: 696 KCNSMEDAEKVFQSMPT--HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITM 753
Query: 262 VSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++ S L GR +H++ I GF D V N+LI+MY+KCG+++S+ +F+ +
Sbjct: 754 INIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSIT 813
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ VSW A+I+ Q G +EAL+LF M+ AG D V + +S C +LE G
Sbjct: 814 NKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQ 873
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS---WTTMIAGCAL 437
GL + V NA +DMY KCG + E+ +P++ + W T+I+G A
Sbjct: 874 LHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQQCWNTLISGYAK 930
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G F EA + F QM+ +P+ VTF+A+L AC+HAG ++KG Y+N M + V+P +
Sbjct: 931 YGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIK 990
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
H C+ DLLGR G+ EA F++ MP+ + IW +LL + + H+N+EIG A +L EL
Sbjct: 991 HCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLEL 1050
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+P + YV ++N+YA RW V LR+ MK + K P S + + + TF + D
Sbjct: 1051 DPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGD 1108
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 237/506 (46%), Gaps = 17/506 (3%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL +R+M+++ + N F + C L + + + ++ S + + V +++
Sbjct: 430 EALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLI 489
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
M+ R+ A KLFD+M + D SWNAMI ++ G K +F +MR G++ D
Sbjct: 490 TMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDAT 549
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ L + H S +HS + +D+ V+V N ++ Y+ L AE +F +
Sbjct: 550 TLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 609
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R ++SWN++I D+L + + P+ T S L +C P AL+
Sbjct: 610 SR--RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 667
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G++VH+ + ++ V N+LI+MY KC ++ A +F M VS+ +I GYA
Sbjct: 668 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 727
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE-LGKWFDNYACSGGLKDNVM 395
D +A+++F M +AG P+ +T++++ S L G+ Y G +
Sbjct: 728 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 787
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V N+LI MY+KCG++ + +F ++ K +VSW +IA G EAL LF M
Sbjct: 788 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAG 847
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMADLLGRK 509
+ +RV L +C LE+G L K Y VN + D+ G+
Sbjct: 848 NKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM-------DMYGKC 900
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLL 535
GK+ E L V I+ W TL+
Sbjct: 901 GKMDEMLQVVPDQAIRPQQ-CWNTLI 925
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 202/454 (44%), Gaps = 9/454 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAK---CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
IHG V+ F + T++ Y + A LFD+M DR ++W + G +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA---KHLSLLKSVHSFGIHIGVDAD 189
G K + MR G+ + L A + ++ ++H+ G+ +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + + Y + A+ +F + E R VVSW +++ + +++L YR M
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPE--RNVVSWTALMVALSSNGYLEEALRAYRQM 438
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
DG + +++S C E V G V S I G VSV N+LI+M+ G +
Sbjct: 439 RRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRV 498
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
A LFD M + +SW AMIS Y+ +G + +F M G PD T+ S++S C
Sbjct: 499 HDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVC 558
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
S G + L +V V NAL++MYS G + DA LF+ + + ++SW
Sbjct: 559 ASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWN 618
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
TMI+ N +AL Q+ + PN +TF + L AC+ G L G ++ ++
Sbjct: 619 TMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQL 678
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
+ L + + + G+ +++A QSMP
Sbjct: 679 -SLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 711
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I V +AL LF M+ + + + +CA L+ +HG
Sbjct: 817 IVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG 876
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+KS SD +V +DMY KC ++D ++ R WN +I G+A+ G+ ++
Sbjct: 877 LGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKE 936
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSV-HSFGIHIGV 186
F M G + D+VT + L A HA K + S+ SFG+ G+
Sbjct: 937 AEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGI 989
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 283 HGIHYGFDLDVSVI--NTLISMYSKCGDIDSAR---FLFDGMCDRTRVSWTAMISGYAQK 337
HG+ L +S NTL++ Y + D +A LFD M DRT +W +SG +
Sbjct: 39 HGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVRC 98
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGC---GQSGALELGKWFDNYACSGGLKDNV 394
G A + M G + S+++ C G+ + G GL NV
Sbjct: 99 GRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNV 158
Query: 395 MVCNALIDM 403
+ AL+ +
Sbjct: 159 YIGRALLHL 167
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/517 (37%), Positives = 275/517 (53%), Gaps = 29/517 (5%)
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLL-KSVH 178
W I A G + LF MR A +V AA+ A LS L S+H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMR--ASAAPRSSVPASLPAALKSCAALGLSALGASLH 73
Query: 179 SFGIHIGVDADVSVCNTWISAYAK--CN----------DLKMAELVFRGIEEGL-----R 221
+ I G AD N ++ Y K C+ D+ + F + + R
Sbjct: 74 ALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIER 133
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD---VTTVVSLLSSCVCPEALVQGR 278
VVSWN+++ GC + ++L F R M +GFRPD ++TV+ + + C + +G
Sbjct: 134 DVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECA---DVKRGL 190
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH GFD DV V ++LI MY+ C D + +FD + R + W ++++G AQ G
Sbjct: 191 EVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNG 250
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
++EAL +F M AG P VT S+I CG +L GK Y GG +DNV + +
Sbjct: 251 SVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISS 310
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LIDMY KCG I A +F + VVSWT MI G AL+G EAL LF +M + +P
Sbjct: 311 SLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKP 370
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N +TFLAVL AC+HAG ++KGW YF M+ Y + P L H++ +AD LGR G+L EA +F
Sbjct: 371 NHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNF 430
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+ M IK A +W TLL AC++H+N + E VA ++ ELEP S +V ++N+Y+ GRW
Sbjct: 431 ISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRW 490
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ A+LR M++ +KK P S + + K F D
Sbjct: 491 NEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHD 527
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 221/467 (47%), Gaps = 25/467 (5%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNL--TFPFIAKACAKLSDFL 71
Y + W QIR A + A+ LF RM+ + +++ + P K+CA L
Sbjct: 8 YPPPPPSSWAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSA 67
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAK--CDRLDCA-----------------YKLF 112
+H ++S ++D F ++++Y K C LD K+F
Sbjct: 68 LGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVF 127
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D+M +RDV SWN +++G A+ G + L M G + D T+ + +
Sbjct: 128 DEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVK 187
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
VH F G D+DV V ++ I YA C + VF + +R + WNS++ G
Sbjct: 188 RGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLP--VRDHILWNSLLAG 245
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
C +++L +R M+ G RP T SL+ C +L G+ +H++ I GF+ +
Sbjct: 246 CAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDN 305
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
V + ++LI MY KCG+I A +FD M VSWTAMI GYA G EAL LF ME
Sbjct: 306 VFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMEL 365
Query: 353 AGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
P+ +T L++++ C +G ++ G K+F + + G+ + AL D + G +
Sbjct: 366 GNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELD 425
Query: 412 DARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+A + K S W+T++ C ++ + A ++ ++MEL+ R
Sbjct: 426 EAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPR 472
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 274/505 (54%), Gaps = 2/505 (0%)
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+F ++ + ++ WN MI G + + L+ +MR G + T+ + +A
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L +HS + G D DV V + +S Y KC++ A VF I + + VVSW +II
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD--KNVVSWTAII 187
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G F +++ ++ ++ G +PD ++V +L++C G + + G
Sbjct: 188 TGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG 247
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+V V +L+ MY KCG+++ A +F M ++ VSW+ MI GYA G +AL LFF M
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQM 307
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
++ PD T++ ++S C GAL+LG W + N ++ ALIDMYSKCGS+
Sbjct: 308 QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A E+F A+ +K V W M+ G ++NG LF + + +RP+ TF+ +L C
Sbjct: 368 TQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
TH GF+ +G +FN M +V+ + P + HY CM DLLGR G L EA + +MP+K +A +
Sbjct: 428 THGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVV 487
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
WG LL CK+H++ + E V +L ELEP ++ YV+++NIY+ RW+ +R+ MK
Sbjct: 488 WGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKE 547
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
Q++K S + I+G F V D
Sbjct: 548 QQIQKIRACSWIEIDGIVHEFLVGD 572
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 220/443 (49%), Gaps = 4/443 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ I WN+ IR V K+ A+ L+ M+ PNN T PF+ KACA+ D
Sbjct: 75 KEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGL 134
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH +VK+ + D+FV+T+++ +Y KCD D A K+FD +PD++V SW A+I G+ G
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + F + +G++ D +++ + A + + + + G+ +V V
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ + Y KC +L+ A L+F + E + +VSW+++I G + +L+ + M +
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPE--KDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD T+V +LS+C AL G S F + + LI MYSKCG + A
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F M + RV W AM+ G + G LF +E G PD T + ++ GC G
Sbjct: 373 IFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 375 LELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMI 432
+ G+ +F+N L ++ ++D+ + G + +A +L +P K V W ++
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 433 AGCALNGEFVEALDLFHQMMELD 455
GC L+ + A + +++EL+
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELE 515
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 2/260 (0%)
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
Q + +H+ + D D ++N ++ G + ++ +F + + W MI G
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLV 90
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
K D+A+ L+ +M G +P+ T+ ++ C + + LG + G +V
Sbjct: 91 SKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVF 150
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V +L+ +Y KC + DA ++F +P+K VVSWT +I G +G F EA+ F +++E+
Sbjct: 151 VKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
L+P+ + + VL AC G G + + + + + + D+ + G L+ A
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSG-EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269
Query: 516 LDFVQSMPIKSDAGIWGTLL 535
+MP K D W T++
Sbjct: 270 NLIFSAMPEK-DIVSWSTMI 288
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 272/510 (53%), Gaps = 16/510 (3%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSV 177
SW I A G + LF MR A +V+ A+ + +L S+
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 178 HSFGIHIGVDADVSVCNTWISAYAK-------CNDLKMAELVFRGI-----EEGLRTVVS 225
H+ + G AD N ++ Y K ++ + +V + E + VVS
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
WN+++ GC + ++L R M DG +PD T+ S+L + +G +H
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
GF DV V ++LI MY+ C D + +FD + R + W +M++G AQ G +DEAL
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALG 260
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LF M +G P VT S+I CG +L LGK Y GG NV + ++LIDMY
Sbjct: 261 LFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYC 320
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCG++ AR +F + +VSWT MI G AL+G EAL LF +M +L+PN +TFLA
Sbjct: 321 KCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLA 380
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL AC+HAG ++KGW YFN M+ Y + P L H++ +AD LGR GKL+EA +F+ M IK
Sbjct: 381 VLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIK 440
Query: 526 SDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLR 585
A +W TLL ACK+H+N + E VA ++F+LEP S ++ ++N Y+ GRW+ A+LR
Sbjct: 441 PTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLR 500
Query: 586 TMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
M++ ++K P S + + K F D
Sbjct: 501 KSMRKKGMQKEPACSWIEVKNKQHVFVAHD 530
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 223/457 (48%), Gaps = 22/457 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNN----LTFPFIAKACAKLSDFLYSQMI 76
W QIR A + + H A+ LF RM+ +D + P K+CA L +
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDR--------------LDCAYKLFDKMPDRDVAS 122
H ++S ++D F ++++Y K L+ K+FD+MP++DV S
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
WN +++G A+ G + L L M G + D T+ + + +H F
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
G DV V ++ I YA C + VF + +R + WNS++ GC D++
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLP--VRDAILWNSMLAGCAQNGSVDEA 258
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L +R M++ G +P T SL+ +C +L+ G+ +H++ I GFD +V + ++LI M
Sbjct: 259 LGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDM 318
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y KCG++ AR +FD + VSWTAMI G+A G EAL LF ME P+ +T
Sbjct: 319 YCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITF 378
Query: 363 LSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
L++++ C +G ++ G K+F++ + G+ ++ AL D + G + +A +
Sbjct: 379 LAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMK 438
Query: 422 EKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLR 457
K S W+T++ C ++ V A ++ ++ +L+ R
Sbjct: 439 IKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPR 475
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
S+ R+ +S I W + I A +AL+LF RM+ +++PN++TF + AC
Sbjct: 326 SIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTAC 385
Query: 65 --AKLSD----FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
A L D + S H IV S + + D + +L+ AY M +
Sbjct: 386 SHAGLVDKGWKYFNSMSDHYGIVPS-----LEHHAALADTLGRPGKLEEAYNFISGMKIK 440
Query: 119 DVAS-WNAMI 127
AS W+ ++
Sbjct: 441 PTASVWSTLL 450
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 270/441 (61%), Gaps = 4/441 (0%)
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+++H+ + D+ + N ++ YAKC L+ A+ +F + + +VSW +I G +
Sbjct: 125 RAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT--KDMVSWTVLISGYS 182
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+ ++L + M++ GF+P+ T+ SLL + + GR +H+ + YG+D++V
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V ++L+ MY++ + A+ +F+ + + VSW A+I+G+A+KG+ + +RLF M G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQG 302
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P T S+++ C SG+LE GKW + G + + N LIDMY+K GSI DA+
Sbjct: 303 FEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAK 361
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F L ++ +VSW ++I+G A +G EAL LF QM++ ++PN +TFL+VL AC+H+G
Sbjct: 362 KVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 421
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
L++G YF LM K +++ ++ H+ + DLLGR G+L EA F++ MPIK A +WG L
Sbjct: 422 LLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGAL 480
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L AC++H+N+++G Y A ++FEL+PH + P+V ++NIYA GR A +R MMK + VK
Sbjct: 481 LGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVK 540
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K P S V I + F D
Sbjct: 541 KEPACSWVEIENEVHVFVAND 561
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 206/407 (50%), Gaps = 4/407 (0%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+EP + + C L + IH HI S F D+ + +++MYAKC L+ A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LFDKMP +D+ SW +I G++Q G + L LF M +G Q + T+ L +A+
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ +H+F + G D +V V ++ + YA+ ++ A+++F + + VVSWN++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL--AAKNVVSWNAL 278
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G + + + + M+ GF P T S+L +C +L QG+ VH+H I G
Sbjct: 279 IAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGG 337
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ NTLI MY+K G I A+ +F + + VSW ++ISGYAQ G EAL+LF
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 397
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M A P+ +T LS+++ C SG L+ G+++ ++ V ++D+ + G
Sbjct: 398 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 457
Query: 410 IGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +A + +P K T W ++ C ++ + Q+ ELD
Sbjct: 458 LNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELD 504
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 152/289 (52%), Gaps = 5/289 (1%)
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P+ T +L+ C L QGR +H+H F+ D+ ++N +++MY+KCG ++ A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M + VSWT +ISGY+Q G EAL LF M G P+ T+ S++ G
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+ G+ ++ G NV V ++L+DMY++ + +A+ +F +L K VVSW +IA
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQV 492
G A GE + LF QM+ P T+ +VL AC +G LE+G W + +++ Q
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQ- 338
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
P + + D+ + G +K+A + + +K D W +++ H
Sbjct: 339 -PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQH 385
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 147/321 (45%), Gaps = 4/321 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I +A +AL LF +M +PN T + KA + + +H +
Sbjct: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSL 233
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++ V ++++DMYA+ + A +F+ + ++V SWNA+I G A+ G E V+
Sbjct: 234 KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMR 293
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M G + T + A + L K VH+ I G + NT I YA
Sbjct: 294 LFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYA 352
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K +K A+ VFR + + + +VSWNSII G ++L + M+ +P+ T
Sbjct: 353 KSGSIKDAKKVFRRLVK--QDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITF 410
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFLFDGMC 320
+S+L++C L +G+ + + V+ T++ + + G ++ A +F+ +
Sbjct: 411 LSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPI 470
Query: 321 DRTRVSWTAMISGYAQKGDLD 341
T W A++ ++D
Sbjct: 471 KPTAAVWGALLGACRMHKNMD 491
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 6/227 (2%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ + WN+ I K E + LF +M + EP + T+ + ACA +
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKW 327
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H H++KS ++ T++DMYAK + A K+F ++ +D+ SWN++I G+AQ G
Sbjct: 328 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 387
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M +Q + +T + + A H+ L + ++A V+ T
Sbjct: 388 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVT 447
Query: 196 WISAYAKCNDLKMAELVFRGIEEG--LRTVVSWNSIIGGCTYGDKFD 240
+ + L A + IEE T W +++G C D
Sbjct: 448 VVDLLGRAGRLNEAN---KFIEEMPIKPTAAVWGALLGACRMHKNMD 491
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 11 NKIYR---SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
K++R I WNS I +AL LF +M K ++PN +TF + AC+
Sbjct: 361 KKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHS 420
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS-WNAM 126
Q + K + + T+VD+ + RL+ A K ++MP + A+ W A+
Sbjct: 421 GLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGAL 480
Query: 127 I 127
+
Sbjct: 481 L 481
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 270/452 (59%), Gaps = 2/452 (0%)
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A ++ ++L+ ++ VH+ G+ ++ V N I Y+ L A +F G+ +R
Sbjct: 68 ALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGM--CVRDS 125
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSW+ ++GG + + +R +I G RPD T+ ++ +C + L GRL+H
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+G DLD V L+ MY KC +I+ ARFLFD M +R V+WT MI GYA+ G +E+
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
L LF M G VPD V +++++ C + GA+ + D+Y + +V++ A+IDM
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 305
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y+KCG + ARE+F + EK V+SW+ MIA +G+ +ALDLF M+ + P+++T
Sbjct: 306 YAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITL 365
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
++L AC+HAG +E+G +F+ M + Y V ++ HY+C+ DLLGR G+L EAL ++SM
Sbjct: 366 ASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT 425
Query: 524 IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVAN 583
I+ D G+WG L AC+ H+++ + E A L EL+ + YV ++NIYA GRW+ VA
Sbjct: 426 IEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAK 485
Query: 584 LRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R +M + ++KK PG + + ++ K+ F+V D
Sbjct: 486 IRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGD 517
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 266/446 (59%), Gaps = 2/446 (0%)
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+L+ ++ VH G+ ++ V N + Y+ L A +F G+ +R VSW+ +
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGM--CVRDSVSWSVM 807
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
+GG + + +R +I G RPD T+ ++ +C + L GRL+H +G
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
DLD V L+ MY KC +I+ ARFLFD M +R V+WT MI GYA+ G+ +E+L LF
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M G VPD V +++++ C + GA+ + D+Y + +V++ A+IDM++KCG
Sbjct: 928 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ ARE+F + EK V+SW+ MIA +G+ +ALDLF M+ + PN++T +++L A
Sbjct: 988 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 1047
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
C+HAG +E+G +F+ M + Y V ++ HY+C+ DLLGR G+L EAL + SM + D G
Sbjct: 1048 CSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEG 1107
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
+WG L AC+ H+++ + E A L EL+P + Y+ ++NIYA GRW+ VA +R +M
Sbjct: 1108 LWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMS 1167
Query: 590 RNQVKKFPGQSLVHINGKTCTFTVED 615
+ ++KK PG + + ++ K+ F+V D
Sbjct: 1168 QRRLKKIPGWTWIEVDNKSHQFSVGD 1193
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 212/439 (48%), Gaps = 7/439 (1%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
L F A + + +H +I V ++ Y+ LD AY LF
Sbjct: 58 QRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLF 117
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D M RD SW+ M+ GFA++G F + G + D T+ + +A K+L
Sbjct: 118 DGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ 177
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+ + +H G+D D VC + Y KC +++ A +F ++E R +V+W +IGG
Sbjct: 178 MGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQE--RDLVTWTVMIGG 235
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
K ++SL + M +G PD +V+++ +C A+ + R++ + F LD
Sbjct: 236 YAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD 295
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
V + +I MY+KCG ++SAR +FD M ++ +SW+AMI+ Y G +AL LF M +
Sbjct: 296 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLS 355
Query: 353 AGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+G +PD +T+ S++ C +G +E G ++F + ++ +V ++D+ + G +
Sbjct: 356 SGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLD 415
Query: 412 DARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR-PNRVTFLAVLQA 469
+A +L ++ EK W + C + + V A ++EL + P L+ + A
Sbjct: 416 EALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYA 475
Query: 470 CTHAGFLEKGWGYFNLMTK 488
+AG E +LM++
Sbjct: 476 --NAGRWEDVAKIRDLMSQ 492
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 188/383 (49%), Gaps = 4/383 (1%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H ++ V +V Y+ LD AY LFD M RD SW+ M+ GFA++
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G F + G + D T+ + +A K+L + + +H G+D D VC
Sbjct: 815 GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ Y KC +++ A +F + E R +V+W +IGG ++SL + M +G
Sbjct: 875 AALVDMYGKCREIEDARFLFDKMXE--RDLVTWTVMIGGYAECGNANESLVLFDKMREEG 932
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD +V+++ +C A+ + R + + F LDV + +I M++KCG ++SAR
Sbjct: 933 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAR 992
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD M ++ +SW+AMI+ Y G +AL LF M +G +P+ +T++S++ C +G
Sbjct: 993 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 1052
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
+E G ++F ++ +V ++D+ + G + +A +L ++ EK W
Sbjct: 1053 LVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAF 1112
Query: 432 IAGCALNGEFVEALDLFHQMMEL 454
+ C + + A ++EL
Sbjct: 1113 LGACRTHKDVXLAEKAATSLLEL 1135
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 138/278 (49%), Gaps = 4/278 (1%)
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
+S+ V L Q R VH+ +G ++ V N LI YS +D A LFDGMC R
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
VSW+ M+ G+A+ GD F + G PD T+ +I C L++G+ +
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
GL + VC AL+DMY KC I DAR LF + E+ +V+WT MI G A G+ E+
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-LMTKVYQVNPELNHYSCMA 503
L LF +M E + P++V + V+ AC G + K + + K +Q++ L + M
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG--TAMI 303
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
D+ + G ++ A + M K+ W ++ A H
Sbjct: 304 DMYAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYH 340
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
P L Q R VH +G ++ V N L+ YS +D A LFDGMC R VSW+ M
Sbjct: 748 PTNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVM 807
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
+ G+A+ GD F + G PD T+ +I C L++G+ + GL
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ VC AL+DMY KC I DAR LF + E+ +V+WT MI G A G E+L LF +
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-LMTKVYQVNPELNHYSCMADLLGRK 509
M E + P++V + V+ AC G + K + + K +Q++ L + M D+ +
Sbjct: 928 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMIDMHAKC 985
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
G ++ A + M K+ W ++ A H
Sbjct: 986 GCVESAREIFDRMEEKNVIS-WSAMIAAYGYH 1016
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 3/279 (1%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
FR + + P+N T PF+ +AC L + ++IH + K D FV +VDMY K
Sbjct: 148 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 207
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C ++ A LFDKM +RD+ +W MI G+A+ G + L LF MR G+ D V ++ +
Sbjct: 208 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 267
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A + + + + DV + I YAKC ++ A +F +EE +
Sbjct: 268 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE--K 325
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLV 280
V+SW+++I Y + +L+ + M+ G PD T+ SLL +C + +G R
Sbjct: 326 NVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFF 385
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
S Y DV ++ + + G +D A L M
Sbjct: 386 SSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSM 424
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
FR + + P+N T PF+ +AC L + ++IH + K D FV +VDMY K
Sbjct: 824 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 883
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C ++ A LFDKM +RD+ +W MI G+A+ G + L LF MR G+ D V ++ +
Sbjct: 884 CREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTV 943
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A + +++ + DV + I +AKC ++ A +F +EE +
Sbjct: 944 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE--K 1001
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLV 280
V+SW+++I Y + +L+ + M+ G P+ T+VSLL +C + +G R
Sbjct: 1002 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 1061
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
Y DV ++ + + G +D A L M
Sbjct: 1062 SXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSM 1100
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + +A+++L+LF +M++ + P+ + + ACAKL +++I +I
Sbjct: 229 WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 288
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+ + T M+DMYAKC ++ A ++FD+M +++V SW+AMI + G K L
Sbjct: 289 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 348
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
LF M G+ D +T+ L A HA
Sbjct: 349 LFPMMLSSGMLPDKITLASLLYACSHA 375
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I + A+++L+LF +M++ + P+ + + ACAKL ++ I +I
Sbjct: 905 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 964
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+ + T M+DM+AKC ++ A ++FD+M +++V SW+AMI + G K L
Sbjct: 965 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 1024
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
LF M GI + +T++ L A HA
Sbjct: 1025 LFPMMLRSGILPNKITLVSLLYACSHA 1051
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 273/505 (54%), Gaps = 2/505 (0%)
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+F ++ + ++ WN MI G + + L+ +MR G + T+ + +A
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L +HS + G D DV V + +S Y KC++ A VF I + + VVSW +II
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD--KNVVSWTAII 187
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G F +++ ++ ++ G +PD ++V +L++C G + + G
Sbjct: 188 TGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG 247
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+V V +L+ MY KCG+++ A +F M ++ VSW+ MI GYA G +AL LFF M
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQM 307
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
++ PD T++ ++S C GAL+LG W + N ++ ALIDMYSKCGS+
Sbjct: 308 QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A E+F A+ K V W M+ G ++NG LF + + +RP+ TF+ +L C
Sbjct: 368 TQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
TH GF+ +G +FN M +V+ + P + HY CM DLLGR G L EA + +MP+K +A +
Sbjct: 428 THGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVV 487
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
WG LL CK+H++ + E V +L ELEP ++ YV+++NIY+ RW+ +R+ MK
Sbjct: 488 WGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKE 547
Query: 591 NQVKKFPGQSLVHINGKTCTFTVED 615
Q++K S + I+G F V D
Sbjct: 548 QQIQKIRACSWIEIDGIVHEFLVGD 572
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 220/443 (49%), Gaps = 4/443 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ I WN+ IR V K+ A+ L+ M+ PNN T PF+ KACA+ D
Sbjct: 75 KEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGL 134
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH +VK+ + D+FV+T+++ +Y KCD D A K+FD +PD++V SW A+I G+ G
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + F + +G++ D +++ + A + + + + G+ +V V
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ + Y KC +L+ A L+F + E + +VSW+++I G + +L+ + M +
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPE--KDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD T+V +LS+C AL G S F + + LI MYSKCG + A
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F M + RV W AM+ G + G LF +E G PD T + ++ GC G
Sbjct: 373 IFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 375 LELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMI 432
+ G+ +F+N L ++ ++D+ + G + +A +L +P K V W ++
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 433 AGCALNGEFVEALDLFHQMMELD 455
GC L+ + A + +++EL+
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELE 515
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 2/260 (0%)
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
Q + +H+ + D D ++N ++ G + ++ +F + + W MI G
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLV 90
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
K D+A+ L+ +M G +P+ T+ ++ C + + LG + G +V
Sbjct: 91 SKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVF 150
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V +L+ +Y KC + DA ++F +P+K VVSWT +I G +G F EA+ F +++E+
Sbjct: 151 VKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
L+P+ + + VL AC G G + + + + + + D+ + G L+ A
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSG-EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269
Query: 516 LDFVQSMPIKSDAGIWGTLL 535
+MP K D W T++
Sbjct: 270 NLIFSAMPEK-DIVSWSTMI 288
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/584 (31%), Positives = 304/584 (52%), Gaps = 3/584 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N+ + + + + L + M + +E ++ T F KAC L D+ + G V
Sbjct: 124 NAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVC 183
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
F+ +++++ K + CA F +M ++DV WN MI GF Q G + L
Sbjct: 184 KGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNL 243
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F +M I+ VT++ L Q+ ++L+ K +H F + G+ D V T I Y K
Sbjct: 244 FLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCK 303
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
D++ A +F + R +VSWN +I G ++L ++ +I D D TVV
Sbjct: 304 SGDVESARWIFENMPS--RNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVV 361
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SL+ C L G+++H G DL++ + ++ +Y+KCG + A +F+ M ++
Sbjct: 362 SLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNK 421
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
+SWTAM+ G AQ G +AL+LF M+ + +T++S++ C G L G+
Sbjct: 422 NVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVH 481
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKTVVSWTTMIAGCALNGEF 441
V+V ALIDMY+KC I A +F Y L K V+ + +MI+G ++G
Sbjct: 482 ATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLG 541
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL ++H+M L+PN TF+++L AC+H+G +E+G F M K + P Y+C
Sbjct: 542 HKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYAC 601
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLL R G+L++A + + MP +GI TLL C +H++IE+G +A RL LE +
Sbjct: 602 IVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRN 661
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+ Y+ ++NIYA RWD V +R +M ++KK PG S + +N
Sbjct: 662 PSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEVN 705
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 214/436 (49%), Gaps = 3/436 (0%)
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
I+ +P + D F+ +V Y+ L+ A K+FD++P NAM+ G+ Q
Sbjct: 80 IITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDC 139
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ L M ++ D T +A + + V + G+ + ++ ++
Sbjct: 140 IELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNF 199
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
K D+ A+ F + E + VV WN +IGG F + N + M+Y+ P
Sbjct: 200 LVKTGDIMCAQFFFHQMVE--KDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAV 257
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T++SL+ SC L G+ +H + +G D V+ TLI MY K GD++SAR++F+ M
Sbjct: 258 TMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENM 317
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R VSW MISGY Q G L E LRLF + D TV+S+I C ++ L+ GK
Sbjct: 318 PSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGK 377
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ GL N+++ A++D+Y+KCGS+ A +F + K V+SWT M+ G A NG
Sbjct: 378 ILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNG 437
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+AL LF QM + N +T ++++ CT G L +G +T+ + E+
Sbjct: 438 HARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTR-FHFASEVVVM 496
Query: 500 SCMADLLGRKGKLKEA 515
+ + D+ + K+ A
Sbjct: 497 TALIDMYAKCSKINSA 512
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 211/439 (48%), Gaps = 5/439 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + + + LF M N IEP+ +T + ++C ++ + + + +HG ++
Sbjct: 224 WNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVL 283
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D V TT++DMY K ++ A +F+ MP R++ SWN MI G+ Q G L + L
Sbjct: 284 GFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLR 343
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF + + + D TV+ L Q L K +H F G+D ++ + + YA
Sbjct: 344 LFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYA 403
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF ++ + V+SW +++ G D+L + M + + T+
Sbjct: 404 KCGSLAYASSVFERMKN--KNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTL 461
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD-GMC 320
VSL+ C L +GR VH+ + F +V V+ LI MY+KC I+SA +F G+
Sbjct: 462 VSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLT 521
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ + + +MISGY G +AL ++ M G P+ T +S++S C SG +E G
Sbjct: 522 PKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIA 581
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
F N + ++D+ S+ G + A EL +P T T++ GC L+
Sbjct: 582 LFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLH 641
Query: 439 GEFVEALDLFHQMMELDLR 457
+ + L +++ L+ R
Sbjct: 642 KDIELGVKLADRLLSLESR 660
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 3/254 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + WN I V + L LF+++ +D+ ++ T + + C++ +D ++
Sbjct: 319 SRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKI 378
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+HG I + ++ + T +VD+YAKC L A +F++M +++V SW AM+VG AQ G
Sbjct: 379 LHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGH 438
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
L LF M+ + + +T++ L L +SVH+ ++V V
Sbjct: 439 ARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTA 498
Query: 196 WISAYAKCNDLKMAELVFR-GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I YAKC+ + AE+VF+ G+ + V+ +NS+I G +L Y M +G
Sbjct: 499 LIDMYAKCSKINSAEMVFKYGLTP--KDVILYNSMISGYGMHGLGHKALCVYHRMNREGL 556
Query: 255 RPDVTTVVSLLSSC 268
+P+ +T VSLLS+C
Sbjct: 557 QPNESTFVSLLSAC 570
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
ASS+ R+ ++ + W + + A AL LF +M+ + N LT +
Sbjct: 411 ASSVFERM----KNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVY 466
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD-KMPDRDVA 121
C L + +H + + F S++ V T ++DMYAKC +++ A +F + +DV
Sbjct: 467 CCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVI 526
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+N+MI G+ G K LC+++ M G+Q + T + L A H+
Sbjct: 527 LYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHS 573
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/598 (30%), Positives = 312/598 (52%), Gaps = 6/598 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WNS + V +AL LFR M+ N+ T + + CA+L + +H
Sbjct: 232 VASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHA 291
Query: 79 HIVKSPFWSDIFVQ-TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++K S++ +Q ++ MYAK R+D A ++F ++ ++D SWN+M+ + Q F
Sbjct: 292 ALLKCG--SELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYA 349
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + F M G Q D V+ L+ A H L+ + H++ I + D+ V NT +
Sbjct: 350 EAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLM 409
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC ++ + VF + G+R +SW +I+ + ++L + +G D
Sbjct: 410 DMYIKCGSIECSAKVFESM--GIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVD 467
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ S+L +C +++ + VH + I G LD+ + N LI +Y +CG+ D + LF
Sbjct: 468 SMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQ 526
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ + VSWT+MI+ G L+ A+ LF M+ A PD V ++S++ +L
Sbjct: 527 RVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTK 586
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + V ++L+DMYS CGS+ A +F K VV WT MI +
Sbjct: 587 GKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGM 646
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G +A+DLF +M++ L P+ V+FLA+L AC+H+ +E+G Y ++M Y++ P
Sbjct: 647 HGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQE 706
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ D+LGR G+ +EA +F+++MP+ + +W LL AC++HRN + A +L EL
Sbjct: 707 HYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLEL 766
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP + Y+ ++N++A G+W+ RT M ++K P S + I TFT D
Sbjct: 767 EPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGD 824
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 258/532 (48%), Gaps = 13/532 (2%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE---PNNLTFPFIAKACAKLSDFLY 72
+ T+ WN+ + + A +A+ ++ M+ + P+ T + KAC D
Sbjct: 123 ARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRC 182
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD--KMPDRDVASWNAMIVGF 130
+HG VK V ++ MYAKC LD A ++F+ + RDVASWN+++ G
Sbjct: 183 GGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
Q G + L LF M+ G + T + + Q LSL + +H+ + G + ++
Sbjct: 243 VQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI 302
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
CN + YAK + A VF I E + +SWNS++ + ++++F+ M+
Sbjct: 303 Q-CNALLVMYAKYGRVDSALRVFGQIAE--KDYISWNSMLSCYVQNSFYAEAIDFFGEML 359
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
GF+PD VVSL S+ L GR H++ I D+ V NTL+ MY KCG I+
Sbjct: 360 QHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIE 419
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ +F+ M R +SWT +++ +AQ EAL + ++ G + D + + S++ C
Sbjct: 420 CSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCC 479
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
++ L K YA GL D +++ N LID+Y +CG + LF + +K +VSWT+
Sbjct: 480 GLKSISLLKQVHCYAIRNGLLD-LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTS 538
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-LMTKV 489
MI C NG A+ LF +M + +++P+ V +++L A L KG L+ +
Sbjct: 539 MINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRN 598
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + + S + D+ G + A+ + K D +W ++ A +H
Sbjct: 599 FPIEGPV--VSSLVDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMH 647
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 232/476 (48%), Gaps = 20/476 (4%)
Query: 74 QMIHGHIVKSPFWS---DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ +H H V + + D F+ T +V MY +C R+D A +LF+ MP R V SWNA++ +
Sbjct: 77 RQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAY 136
Query: 131 AQMGFLEKVLCLFYNMRLV---GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G + + ++ MR G D T+ + +A VH + +G+D
Sbjct: 137 LSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLD 196
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
V N I YAKC L A VF +++ R V SWNS++ GC + ++L +R
Sbjct: 197 KSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFR 256
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M GF + T V++L C L GR +H+ + G +L++ N L+ MY+K G
Sbjct: 257 GMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAKYG 315
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+DSA +F + ++ +SW +M+S Y Q EA+ F M G PD V+S+ S
Sbjct: 316 RVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSS 375
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
G L G+ F YA L ++ V N L+DMY KCGSI + ++F ++ + +S
Sbjct: 376 ALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHIS 435
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WTT++A A + EAL++ ++ + + + + ++L+ C G +L+
Sbjct: 436 WTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCC-------GLKSISLLK 488
Query: 488 KV--YQVNP---ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+V Y + +L + + D+ G G+ +L+ Q + K D W +++ C
Sbjct: 489 QVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCC 543
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 134/270 (49%), Gaps = 15/270 (5%)
Query: 276 QGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+GR VH+H + G D D + L+ MY +CG +D AR LF+GM RT SW A++
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 333 GYAQKGDLDEALRLFFAMEAA---GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
Y G EA+R++ AM A+ G PD T+ S++ CG G G A G
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPE--KTVVSWTTMIAGCALNGEFVEALDL 447
L + +V NALI MY+KCG + A +F L + + V SW ++++GC NG +EAL L
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL- 506
F M N T +AVLQ C G L G L + + ELN C A L+
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGR---ELHAALLKCGSELN-IQCNALLVM 310
Query: 507 -GRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ G++ AL + K D W ++L
Sbjct: 311 YAKYGRVDSALRVFGQIAEK-DYISWNSML 339
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 314/620 (50%), Gaps = 22/620 (3%)
Query: 15 RSSTINQ--WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + AL FR M ++EP++ T + AC+ L
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H + ++ + F+ T+V MY K +L + L RD+ +WN ++
Sbjct: 218 LMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDA 188
Q L + L M L G++ D T+ + A H + L K +H++ + G +D
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + + Y C + VF G+ + R + WN++I G + + ++L +
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFD--RKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 249 MIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G + TT+ ++ +CV A + +H + G D D V NTL+ MYS+ G
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME--------AAGEV--- 356
ID A +F M DR V+W MI+GY ++AL L M+ A V
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F +P+K V++W +I ++G EA+DL MM ++PN VTF++V AC+H+G +
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTLL 535
++G F +M Y V P +HY+C+ DLLGR G++KEA + MP + AG W +LL
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
A +IH N+EIGE A L +LEP+ A+ YV +ANIY+ G WD +R MK V+K
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 596 FPGQSLVHINGKTCTFTVED 615
PG S + + F D
Sbjct: 755 EPGCSWIEHGDEVHKFVAGD 774
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 176/651 (27%), Positives = 300/651 (46%), Gaps = 62/651 (9%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I +S + W +R V N +A+L + M I+P+N FP + KA A L D
Sbjct: 56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 73 SQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH H+ K + D + V T+V++Y KC YK+FD++ +R+ SWN++I
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLLKSVHSFGIHIGVDA 188
E L F M ++ T++ + A + + L + K VH++G+ G +
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 234
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + NT ++ Y K L ++++ G R +V+WN+++ ++ ++L + R
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSF--GGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCG 307
M+ +G PD T+ S+L +C E L G+ +H++ + G D + V + L+ MY C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMI 366
+ S R +FDGM DR W AMI+GY+Q EAL LF M E+AG + + T+ ++
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C +SGA + + GL + V N L+DMYS+ G I A +F + ++ +V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELD-----------LRPNRVTFLAVLQACTHAGF 475
+W TMI G + +AL L H+M L+ L+PN +T + +L +C
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 476 LEKGW----------------------------GYFNLMTKVYQVNPELN--HYSCMADL 505
L KG G + KV+ P+ N ++ +
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 506 LGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL---FELEP 559
G G +EA+D ++ M +K + + ++ AC ++ G + Y + + +EP
Sbjct: 593 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK-----KFPGQSLVHIN 605
S+ Y + ++ GR L MM R+ K G S +H N
Sbjct: 653 -SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/502 (37%), Positives = 268/502 (53%), Gaps = 5/502 (0%)
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
P S+N + FA L LF M ++ D T+ L AA A +
Sbjct: 78 PAPTAFSYNVTLRFFASTR-PRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFAR 136
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
S H+ +G+ A ++ ++ Y+ D A VF GI R VVSWN+++
Sbjct: 137 SAHALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPR--RDVVSWNAMMKAYER 194
Query: 236 GDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
D +R MI +G P+ TV +L++C LV GR + ++
Sbjct: 195 AGMAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSL 254
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V + L+ MY KCG++ AR +FDG+ + V+W AMI+GYAQ G EA+ LF +M G
Sbjct: 255 VGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEG 314
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
PD +T++ ++S C GALELG D YA GL NV V AL+DMYSKCG + A
Sbjct: 315 ASPDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAV 374
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHA 473
++F LP K +W +I G A NG EA+ F M E LRP+ +TF+ VL AC HA
Sbjct: 375 QVFGKLPCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHA 434
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G L+ G +FN +T +Q+ P++ HYSCM DLL R G L+EA DFV+ +P K+DA + G
Sbjct: 435 GLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGA 494
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL AC+ +N+E+ E V R+ +LEP ++ YV + IYA R D A +R +M+ V
Sbjct: 495 LLAACRKCKNVEVSERVINRIMQLEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGV 554
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
K PG S V ++GK F D
Sbjct: 555 SKIPGCSWVEVSGKVLEFYAGD 576
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 194/402 (48%), Gaps = 6/402 (1%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL LF RM + + P+ T PF+ A A+ + +++ H + + + ++V
Sbjct: 100 ALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSAHALLCRLGLQAHDHTVHSLVT 159
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG-IQADFV 156
MY+ A ++FD +P RDV SWNAM+ + + G V +F +M G + + V
Sbjct: 160 MYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPNEV 219
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
TV + A A L L + + + ++ V + + Y KC ++ A VF GI
Sbjct: 220 TVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGI 279
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ VV+WN++I G +++ + M +G PD T+V +LS+C AL
Sbjct: 280 AH--KDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALEL 337
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G + ++ H G +V V L+ MYSKCGD+D A +F + + +W A+I G A
Sbjct: 338 GTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAF 397
Query: 337 KGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 394
G EA+R F M G PD +T + ++S C +G L+ G +WF++ + +
Sbjct: 398 NGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKI 457
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
+ ++D+ ++ G + +A + +P K V ++A C
Sbjct: 458 EHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALLAAC 499
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 126/262 (48%), Gaps = 4/262 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ WN+ ++ A +FR M + + PN +T + AC D + + +
Sbjct: 182 VVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLE 241
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + V + +V MY KC + A ++FD + +DV +WNAMI G+AQ G +
Sbjct: 242 EWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSK 301
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF++MR G D +T++G+ A L L + ++ H G+ +V V +
Sbjct: 302 EAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALV 361
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRP 256
Y+KC DL A VF + + +WN++I G + + +++ + M +G RP
Sbjct: 362 DMYSKCGDLDKAVQVFGKLP--CKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRP 419
Query: 257 DVTTVVSLLSSCVCPEALVQGR 278
D T + +LS+CV L GR
Sbjct: 420 DDITFIGVLSACVHAGLLKDGR 441
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 315/616 (51%), Gaps = 12/616 (1%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L R+ + I WN+ I ++ + KAL L+ M I+ + +T + +ACA
Sbjct: 214 LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACA 273
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+ +H +K +D+F+ +++MY+ L+ ++ LF+ +P D A WN+
Sbjct: 274 EYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNS 333
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHI 184
MI + GF + + LF MRL I+ D T+ + S+ + +H+ +
Sbjct: 334 MISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKS 393
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVF---RGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
G++ D + N +S Y K N + A+ VF RG++ V+SWN++I
Sbjct: 394 GIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLD-----VISWNTMISAFAQSMFRAK 448
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ + M + + T+VSLL+ C LV GR +H I G +++ S+ +L
Sbjct: 449 AFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTE 508
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY CGD +A +F R VSW ++IS Y + + +AL LF M + E P+ VT
Sbjct: 509 MYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELE-PNSVT 567
Query: 362 VLSMISGCGQSGALELGKWFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
++++++ C Q L LG+ Y L+ + + NA I MY++CG + A ++F
Sbjct: 568 IINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCT 627
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
L +++VSW MI G ++G +A F QM++ +PN V+F +VL AC+H+G G
Sbjct: 628 LQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTG 687
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
F+ M + + + P+L HY CM DLLGR G EA+ F+ SMPI+ DA IW LL +C+
Sbjct: 688 LQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQ 747
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
I N ++ E + +L ELEP + ++ ++NIYA G W V +R ++ + K PG
Sbjct: 748 IKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGT 807
Query: 600 SLVHINGKTCTFTVED 615
S + I + FT D
Sbjct: 808 SWIVIGNQVHHFTATD 823
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 264/565 (46%), Gaps = 19/565 (3%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
SS P + + + S WNS I+ H L + +M+ I P++ T P + KA
Sbjct: 13 SSTPEQTHLVNVS---KDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKA 69
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C +L+ IH I +D+ V T +VD Y KC + A K+F +MP+RD+ SW
Sbjct: 70 CGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSW 129
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NA+I G+ ++ + LF M+ G+ + TV+ L A L L + +H + +
Sbjct: 130 NALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLR 189
Query: 184 IGV-DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
G+ D D V + Y + D ++ VF + +R +VSWN+II G +
Sbjct: 190 NGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLML--VRNIVSWNAIITGFLNVGDCAKA 246
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L Y M+ +G + D T++ ++ +C L G +H I + D+ ++N L++M
Sbjct: 247 LKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNM 306
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
YS G ++S+ LF+ + W +MIS Y G EA+ LF M D+ T+
Sbjct: 307 YSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTI 366
Query: 363 LSMISGCG--QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
M+S C G++ G+ +A G++ + + NAL+ MY K I A+ +F +
Sbjct: 367 AIMLSLCNDLNDGSI-WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKM 425
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
V+SW TMI+ A + +A +LF M E +++ N T +++L C L G
Sbjct: 426 RGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGR 485
Query: 481 GYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
K ++N LN + + ++ G + A + P + D W +L+ +
Sbjct: 486 SIHGFAIKNGLEINTSLN--TSLTEMYINCGDERAATNMFTRCP-QRDLVSWNSLISSYI 542
Query: 540 IHRNIEIGEYVA---YRLFELEPHS 561
+N G+ + + + ELEP+S
Sbjct: 543 --KNDNAGKALLLFNHMISELEPNS 565
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 315/616 (51%), Gaps = 12/616 (1%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L R+ + I WN+ I ++ + KAL L+ M I+ + +T + +ACA
Sbjct: 214 LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACA 273
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+ +H +K +D+F+ +++MY+ L+ ++ LF+ +P D A WN+
Sbjct: 274 EYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNS 333
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHI 184
MI + GF + + LF MRL I+ D T+ + S+ + +H+ +
Sbjct: 334 MISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKS 393
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVF---RGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
G++ D + N +S Y K N + A+ VF RG++ V+SWN++I
Sbjct: 394 GIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLD-----VISWNTMISAFAQSMFRAK 448
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ + M + + T+VSLL+ C LV GR +H I G +++ S+ +L
Sbjct: 449 AFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTE 508
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY CGD +A +F R VSW ++IS Y + + +AL LF M + E P+ VT
Sbjct: 509 MYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELE-PNSVT 567
Query: 362 VLSMISGCGQSGALELGKWFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
++++++ C Q L LG+ Y L+ + + NA I MY++CG + A ++F
Sbjct: 568 IINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCT 627
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
L +++VSW MI G ++G +A F QM++ +PN V+F +VL AC+H+G G
Sbjct: 628 LQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTG 687
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
F+ M + + + P+L HY CM DLLGR G EA+ F+ SMPI+ DA IW LL +C+
Sbjct: 688 LQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQ 747
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
I N ++ E + +L ELEP + ++ ++NIYA G W V +R ++ + K PG
Sbjct: 748 IKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGT 807
Query: 600 SLVHINGKTCTFTVED 615
S + I + FT D
Sbjct: 808 SWIVIGNQVHHFTATD 823
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 264/565 (46%), Gaps = 19/565 (3%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
SS P + + + S WNS I+ H L + +M+ I P++ T P + KA
Sbjct: 13 SSTPEQTHLVNVS---KDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKA 69
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C +L+ IH I +D+ V T +VD Y KC + A K+F +MP+RD+ SW
Sbjct: 70 CGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSW 129
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
NA+I G+ ++ + LF M+ G+ + TV+ L A L L + +H + +
Sbjct: 130 NALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLR 189
Query: 184 IGV-DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
G+ D D V + Y + D ++ VF + +R +VSWN+II G +
Sbjct: 190 NGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLML--VRNIVSWNAIITGFLNVGDCAKA 246
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L Y M+ +G + D T++ ++ +C L G +H I + D+ ++N L++M
Sbjct: 247 LKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNM 306
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
YS G ++S+ LF+ + W +MIS Y G EA+ LF M D+ T+
Sbjct: 307 YSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTI 366
Query: 363 LSMISGCG--QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
M+S C G++ G+ +A G++ + + NAL+ MY K I A+ +F +
Sbjct: 367 AIMLSLCNDLNDGSI-WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKM 425
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
V+SW TMI+ A + +A +LF M E +++ N T +++L C L G
Sbjct: 426 RGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGR 485
Query: 481 GYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
K ++N LN + + ++ G + A + P + D W +L+ +
Sbjct: 486 SIHGFAIKNGLEINTSLN--TSLTEMYINCGDERAATNMFTRCP-QRDLVSWNSLISSYI 542
Query: 540 IHRNIEIGEYVA---YRLFELEPHS 561
+N G+ + + + ELEP+S
Sbjct: 543 --KNDNAGKALLLFNHMISELEPNS 565
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 314/620 (50%), Gaps = 22/620 (3%)
Query: 15 RSSTINQ--WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + AL FR M ++EP++ T + AC+ L
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H + ++ + F+ T+V MY K +L + L RD+ +WN ++
Sbjct: 218 LMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDA 188
Q L + L M L G++ D T+ + A H + L K +H++ + G +D
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + + Y C + VF G+ + R + WN++I G + + ++L +
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFD--RKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 249 MIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G + TT+ ++ +CV A + +H + G D D V NTL+ MYS+ G
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME--------AAGEV--- 356
ID A +F M DR V+W MI+GY ++AL L M+ A V
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F +P+K V++W +I ++G EA+DL MM ++PN VTF++V AC+H+G +
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTLL 535
++G F +M Y V P +HY+C+ DLLGR G++KEA + MP + AG W +LL
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
A +IH N+EIGE A L +LEP+ A+ YV +ANIY+ G WD +R MK V+K
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 596 FPGQSLVHINGKTCTFTVED 615
PG S + + F D
Sbjct: 755 EPGCSWIEHGDEVHKFVAGD 774
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 176/651 (27%), Positives = 300/651 (46%), Gaps = 62/651 (9%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I +S + W +R V N +A+L + M I+P+N FP + KA A L D
Sbjct: 56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 73 SQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH H+ K + D + V T+V++Y KC YK+FD++ +R+ SWN++I
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLLKSVHSFGIHIGVDA 188
E L F M ++ T++ + A + + L + K VH++G+ G +
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 234
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + NT ++ Y K L ++++ G R +V+WN+++ ++ ++L + R
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSF--GGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCG 307
M+ +G PD T+ S+L +C E L G+ +H++ + G D + V + L+ MY C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMI 366
+ S R +FDGM DR W AMI+GY+Q EAL LF M E+AG + + T+ ++
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C +SGA + + GL + V N L+DMYS+ G I A +F + ++ +V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELD-----------LRPNRVTFLAVLQACTHAGF 475
+W TMI G + +AL L H+M L+ L+PN +T + +L +C
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 476 LEKGW----------------------------GYFNLMTKVYQVNPELN--HYSCMADL 505
L KG G + KV+ P+ N ++ +
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 506 LGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL---FELEP 559
G G +EA+D ++ M +K + + ++ AC ++ G + Y + + +EP
Sbjct: 593 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK-----KFPGQSLVHIN 605
S+ Y + ++ GR L MM R+ K G S +H N
Sbjct: 653 -SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 310/607 (51%), Gaps = 67/607 (11%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-------------- 118
++ IH HI+K+ +IF+ +V YAK DR+ A ++FD+MP R
Sbjct: 28 TKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSK 87
Query: 119 -----------------DVASWNAMIVGFAQMGFLEKVL----CLFYN--MRLVGIQADF 155
D+ SWN++I +A GFL + + + YN L I
Sbjct: 88 LACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALST 147
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV---------------------------DA 188
+ ++ Q +H L + V FG V +
Sbjct: 148 MLILASKQGCVHLG-LQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEK 206
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+V + NT I+ +C+ ++ + +F ++E + +SW ++I G T ++++ +R
Sbjct: 207 NVVMYNTLIAGLMRCSRIEDSRQLFYDMQE--KDSISWTAMIAGFTQNGLDREAIDLFRE 264
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M + D T S+L++C AL +G+ VH++ I + ++ V + L+ MY KC
Sbjct: 265 MRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKS 324
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
I SA +F M + VSWTAM+ GY Q G +EA+++F M+ G PD T+ S+IS
Sbjct: 325 IKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISS 384
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C +LE G F A GL + V NAL+ +Y KCGSI D+ LF + VSW
Sbjct: 385 CANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSW 444
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T +++G A G+ E L LF M+ +P++VTF+ VL AC+ AG ++KG F M K
Sbjct: 445 TALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK 504
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+++ P +HY+CM DL R G+L+EA F+ MP DA W +LL +C+ HRN+EIG+
Sbjct: 505 EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGK 564
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
+ A L +LEPH+ A Y+ +++IYA G+W+ VANLR M+ ++K PG S + +
Sbjct: 565 WAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQV 624
Query: 609 CTFTVED 615
F+ +D
Sbjct: 625 HIFSADD 631
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 166/364 (45%), Gaps = 45/364 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I +A+ LFR M+ ++E + TF + AC + + +H +I+
Sbjct: 242 WTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYII 301
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + +IFV + +VDMY KC + A +F KM ++V SW AM+VG+ Q G+ E+ +
Sbjct: 302 RTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVK 361
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F +M+ GI+ D T+ + + + L H + G+ + ++V N ++ Y
Sbjct: 362 IFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYG 421
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ + +F E VSW +++ G K +++L + M+ GF+PD T
Sbjct: 422 KCGSIEDSHRLFS--EMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTF 479
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +LS+C S+ G + +F+ M
Sbjct: 480 IGVLSAC-----------------------------------SRAGLVQKGNQIFESMIK 504
Query: 322 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
R+ +T MI +++ G L+EA + M + PD + S++S C +E
Sbjct: 505 EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFS---PDAIGWASLLSSCRFHRNME 561
Query: 377 LGKW 380
+GKW
Sbjct: 562 IGKW 565
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 304/595 (51%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + + + EA +A+ F M + + + LTF + A L+ + IHG ++
Sbjct: 903 WNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVM 962
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + V +++MY K + A +F +M + D+ SWN MI G G E +
Sbjct: 963 RSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVG 1022
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F ++ + D TV + +A + L +H+ + GV D V I Y
Sbjct: 1023 MFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVY 1082
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+K ++ AE +F + + + SWN+I+ G F +L Y M G R D T
Sbjct: 1083 SKRGKMEEAEFLF--VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQIT 1140
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+V+ + L QG+ +H+ + GF+LD+ V + ++ MY KCG+++SAR +F +
Sbjct: 1141 LVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP 1200
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
V+WT MISG + G + AL + M + PD T +++ C ALE G+
Sbjct: 1201 SPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQ 1260
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ V +L+DMY+KCG+I DAR LF + + SW MI G A +G
Sbjct: 1261 IHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGN 1320
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL F M + P+RVTF+ VL AC+H+G + + + F M K Y + PE+ HYS
Sbjct: 1321 AKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYS 1380
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ D L R G+++EA + SMP ++ A ++ TLL AC++ + E G+ VA +L LEP
Sbjct: 1381 CLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPS 1440
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV ++N+YA +W+ VA+ R MM++ VKK PG S V + K F D
Sbjct: 1441 DSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGD 1495
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 216/469 (46%), Gaps = 47/469 (10%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F + +A A SD + H I+ S D FV ++ MYAKC L A KLFD P
Sbjct: 660 FSILRQAIAA-SDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 117 D--RDVASWNAMIVGF-AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
D RD+ +WNA++ A LF +R + T+ + + + + S
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+S+H + + IG+ DV V ++ YAK ++ A ++F G+ +R VV WN ++
Sbjct: 779 SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGM--AVRDVVLWNVMMKAY 836
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+++ + GFRPD T+ +L C + +++ + ++
Sbjct: 837 VDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYA--------- 887
Query: 294 SVINTLISMYSKCG-DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
T + MY G D+ + W +S + Q+G+ EA+ F M
Sbjct: 888 ----TKLFMYDDDGSDV---------------IVWNKALSRFLQRGEAWEAVDCFVDMIN 928
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
+ D +T + M++ LELGK GL V V N LI+MY K GS+
Sbjct: 929 SRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSR 988
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
AR +F + E ++SW TMI+GC L+G ++ +F ++ L P++ T +VL+AC+
Sbjct: 989 ARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSS 1048
Query: 473 AGFLEKGWGYFNLMTKVY----QVNPELNHY--SCMADLLGRKGKLKEA 515
LE G + L T+++ + L+ + + + D+ ++GK++EA
Sbjct: 1049 ---LEGG---YYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEA 1091
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 238/543 (43%), Gaps = 37/543 (6%)
Query: 22 WNSQIRE-AVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ + A +++H LFR ++++ + T + K C + S+ +HG+
Sbjct: 727 WNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYA 786
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK D+FV +V++YAK + A LFD M RDV WN M+ + + +
Sbjct: 787 VKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAM 846
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISA 199
LF G + D VT+ L++ K++ LK ++ + + D D S W A
Sbjct: 847 LLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKA 906
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
++ + RG +W ++ D F D +N + DG
Sbjct: 907 --------LSRFLQRG--------EAWEAV-------DCFVDMIN--SRVACDGL----- 936
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T V +L+ L G+ +H + G D VSV N LI+MY K G + AR +F M
Sbjct: 937 TFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQM 996
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-SGALELG 378
+ +SW MISG G + ++ +F + +PD TV S++ C G L
Sbjct: 997 NEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLA 1056
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
A G+ + V ALID+YSK G + +A LF + SW ++ G ++
Sbjct: 1057 TQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVS 1116
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+F +AL L+ M E R +++T + +A L++G ++ K N +L
Sbjct: 1117 GDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVK-RGFNLDLFV 1175
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE--IGEYVAYRLFE 556
S + D+ + G+++ A +P D W T++ C + E + Y RL +
Sbjct: 1176 TSGVLDMYLKCGEMESARRVFSEIPSPDDVA-WTTMISGCVENGQEEHALFTYHQMRLSK 1234
Query: 557 LEP 559
++P
Sbjct: 1235 VQP 1237
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 308/592 (52%), Gaps = 21/592 (3%)
Query: 2 AASSLPPRLNKIYRSSTI---------NQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP 52
AA+SL + +++ +S + WN+ + + A+ L R+M+ P
Sbjct: 351 AAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVP 410
Query: 53 NNLTFPFIAKACAK---LSDFLYSQ------MIHGHIVKSPFWSDIFVQTTMVDMYAKCD 103
+++TF I +C++ L + S+ +H ++ + D ++ +V MY +C
Sbjct: 411 DDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCG 470
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
LD A F + R+V SW +I Q G + L L +M L G +A+ +T + L
Sbjct: 471 SLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLG 530
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A LSL K++H G+++D+ N ++ Y C L A LVF + R V
Sbjct: 531 ACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMV--FRDV 588
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSW II + ++L YR M + RPD T++S+L +C ALV+G+ +H
Sbjct: 589 VSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHER 648
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ G + DV V ++S Y KC ++ AR +FD + D+ V W AMI YAQ ++A
Sbjct: 649 IVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKA 708
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
L+ M P+ VT+++++ C + +E G A + G + V NALI+M
Sbjct: 709 FALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINM 768
Query: 404 YSKC-GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
Y+KC G++ A+ F ++ K VVSW++++A A NGE A +LF M + + PN VT
Sbjct: 769 YAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVT 828
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F +VL AC+HAG ++GW YF M + + P HY CM +LL + G++K+A F+ +M
Sbjct: 829 FTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAM 888
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
P++ DA W +LL AC++H + E G A +L + EP ++A YV + NI L
Sbjct: 889 PVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNISKL 940
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 237/477 (49%), Gaps = 15/477 (3%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+I R S I+ W++ I EA K F M ++PN T + +ACA +
Sbjct: 273 RISRPSVIS-WSAFIAAYGQHWEAIKT---FELMNLEGVKPNATTLTSVLRACATVGAHE 328
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH ++ P+ + V +YAKC R+ A ++F +P +D SWNA++ +A
Sbjct: 329 QGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYA 388
Query: 132 QMGFLEKVLCLFYNMRLVGIQAD---FVTVM-GLTQAAI-----HAKHLSLLKSVHSFGI 182
+ G + L M++ G D F+T++ +Q+A+ ++K L+ + VHS I
Sbjct: 389 KQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMI 448
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
G+D D + N + Y +C L A F+GI + R V SW +I + +
Sbjct: 449 SNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQ--RNVFSWTILISLLVQNGEASEG 506
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L + M +G + T +SLL +C L G+ +H G + D+ N L++M
Sbjct: 507 LELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNM 566
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+ C +D AR +F+ M R VSWT +IS YA G EAL+L+ ME PD VT+
Sbjct: 567 YTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTL 626
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+S++ C AL GK + G++ +V V A++ Y KC ++ DAR++F + +
Sbjct: 627 ISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILD 686
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
K +V W MI A N +A L+ +M+E + PN VT + +L +C+ +E+G
Sbjct: 687 KDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERG 743
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 233/482 (48%), Gaps = 18/482 (3%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M + + +T ACA L D L + IH I+ S + + + ++V MY KC
Sbjct: 1 MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
++ A FD+MP+RD+ SWNAMI +AQ ++ + L+ RL G + D VT L A
Sbjct: 61 VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT-V 223
+ L + +H + +D VCN IS Y+ C L A VF E R V
Sbjct: 121 CFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVF---EWSFRPDV 177
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
+W ++I T K + + + M +G R + T +++L +C E L G+ VH
Sbjct: 178 CTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRL 237
Query: 284 GIHYGFDLDVSVINTLISMYSKCG-DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+ G D + + N+LISMY KC D AR +F + + +SW+A I+ Y Q E
Sbjct: 238 ALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---E 294
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A++ F M G P+ T+ S++ C GA E G+ +G N V NA
Sbjct: 295 AIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAAS 354
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
+Y+KC + DA +F ++P K VSW +++ A G F +A+ L QM P+ +T
Sbjct: 355 LYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDIT 414
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE-----LNHYSCMADLL----GRKGKLK 513
F+ +L +C+ + L K +G +T QV+ + L+ + + +LL GR G L
Sbjct: 415 FITILYSCSQSALL-KQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLD 473
Query: 514 EA 515
+A
Sbjct: 474 DA 475
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 232/468 (49%), Gaps = 15/468 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I +A+ L+ + +P+ +TF + AC D + +M+H H +
Sbjct: 79 WNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFL 138
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD V ++ MY+ C LD A +F+ DV +W +I + + G LE
Sbjct: 139 GTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFA 198
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ M G++++ +T + + + L K VH + G+D + + N+ IS Y
Sbjct: 199 TWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYG 258
Query: 202 KCN-DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC+ A VF I +V+SW++ I YG + +++ + M +G +P+ TT
Sbjct: 259 KCSRHPDEAREVFLRISRP--SVISWSAFIAA--YGQHW-EAIKTFELMNLEGVKPNATT 313
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S+L +C A QGR +H+ + + + +V+N S+Y+KC + A +F +
Sbjct: 314 LTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIP 373
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL--- 377
+ VSW A++S YA++G +A+ L M+ G VPD +T ++++ C QS L+
Sbjct: 374 CKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGN 433
Query: 378 ------GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
G+ + S GL + + N L+ MY +CGS+ DAR F + ++ V SWT +
Sbjct: 434 SKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTIL 493
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
I+ NGE E L+L M N++TF+++L AC+ G L G
Sbjct: 494 ISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLG 541
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 185/394 (46%), Gaps = 10/394 (2%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
M L G+ D +T++ A K +H+ + G+ A V + N+ + Y KC
Sbjct: 1 MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
++ A F + E R ++SWN++I + ++ Y + +G +PD T SLL
Sbjct: 61 VEEARNAFDRMPE--RDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLL 118
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
++C L GR++H H + F D V N LISMYS CG +D A +F+
Sbjct: 119 NACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVC 178
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
+WT +I+ Y + G L+ A + M G + +T L+++ C LE GK A
Sbjct: 179 TWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLA 238
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGD-ARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
GL ++ + N+LI MY KC D ARE+F + +V+SW+ IA G+ EA
Sbjct: 239 LGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAA---YGQHWEA 295
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL-MTKVYQVNPELNHYSCMA 503
+ F M ++PN T +VL+AC G E+G L + Y N + + A
Sbjct: 296 IKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTV--LNAAA 353
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
L + ++ +A S+P K DA W ++ A
Sbjct: 354 SLYAKCSRVADASRVFSSIPCK-DAVSWNAIVSA 386
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 314/620 (50%), Gaps = 22/620 (3%)
Query: 15 RSSTINQ--WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + AL FR M ++EP++ T + AC+ L
Sbjct: 71 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 130
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H + ++ + F+ T+V MY K +L + L RD+ +WN ++
Sbjct: 131 LMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 189
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDA 188
Q L + L M L G++ D T+ + A H + L K +H++ + G +D
Sbjct: 190 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 249
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + + Y C + VF G+ + R + WN++I G + + ++L +
Sbjct: 250 NSFVGSALVDMYCNCKQVLSGRRVFDGMFD--RKIGLWNAMIAGYSQNEHDKEALLLFIG 307
Query: 249 MIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G + TT+ ++ +CV A + +H + G D D V NTL+ MYS+ G
Sbjct: 308 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 367
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME--------AAGEV--- 356
ID A +F M DR V+W MI+GY ++AL L M+ A V
Sbjct: 368 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 427
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++
Sbjct: 428 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 487
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F +P+K V++W +I ++G EA+DL MM ++PN VTF++V AC+H+G +
Sbjct: 488 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 547
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTLL 535
++G F +M Y V P +HY+C+ DLLGR G++KEA + MP + AG W +LL
Sbjct: 548 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
A +IH N+EIGE A L +LEP+ A+ YV +ANIY+ G WD +R MK V+K
Sbjct: 608 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 667
Query: 596 FPGQSLVHINGKTCTFTVED 615
PG S + + F D
Sbjct: 668 EPGCSWIEHGDEVHKFVAGD 687
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 167/614 (27%), Positives = 285/614 (46%), Gaps = 62/614 (10%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCA 108
I+P+N FP + KA A L D + IH H+ K + D + V T+V++Y KC
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH- 167
YK+FD++ +R+ SWN++I E L F M ++ T++ + A +
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 168 --AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
+ L + K VH++G+ G + + + NT ++ Y K L ++++ G R +V+
Sbjct: 126 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSF--GGRDLVT 182
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
WN+++ ++ ++L + R M+ +G PD T+ S+L +C E L G+ +H++ +
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242
Query: 286 HYG-FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G D + V + L+ MY C + S R +FDGM DR W AMI+GY+Q EAL
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302
Query: 345 RLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
LF M E+AG + + T+ ++ C +SGA + + GL + V N L+DM
Sbjct: 303 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 362
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-------- 455
YS+ G I A +F + ++ +V+W TMI G + +AL L H+M L+
Sbjct: 363 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 422
Query: 456 ---LRPNRVTFLAVLQACTHAGFLEKGW----------------------------GYFN 484
L+PN +T + +L +C L KG G
Sbjct: 423 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 482
Query: 485 LMTKVYQVNPELN--HYSCMADLLGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCACK 539
+ KV+ P+ N ++ + G G +EA+D ++ M +K + + ++ AC
Sbjct: 483 MSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 542
Query: 540 IHRNIEIGEYVAYRL---FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK-- 594
++ G + Y + + +EP S+ Y + ++ GR L MM R+ K
Sbjct: 543 HSGMVDEGLRIFYVMKPDYGVEP-SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 601
Query: 595 ---KFPGQSLVHIN 605
G S +H N
Sbjct: 602 AWSSLLGASRIHNN 615
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 198/419 (47%), Gaps = 11/419 (2%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWISAYAKCN 204
M ++GI+ D L +A + + L K +H+ G D V+V NT ++ Y KC
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSL 264
D VF I E R VSWNS+I +K++ +L +R M+ + P T+VS+
Sbjct: 61 DFGAVYKVFDRISE--RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 118
Query: 265 LSSCV---CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+++C PE L+ G+ VH++G+ G +L+ +INTL++MY K G + S++ L
Sbjct: 119 VTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 177
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V+W ++S Q L EAL M G PD T+ S++ C L GK
Sbjct: 178 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 237
Query: 382 DNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
YA +G L +N V +AL+DMY C + R +F + ++ + W MIAG + N
Sbjct: 238 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 297
Query: 441 FVEALDLFHQMME-LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
EAL LF M E L N T V+ AC +G + + K ++ +
Sbjct: 298 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQ 356
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+ + D+ R GK+ A+ M + D W T++ + E + +++ LE
Sbjct: 357 NTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 414
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK-DNVMVCNALIDMYSKCGSIGD 412
G PD +++ +ELGK + G D+V V N L+++Y KCG G
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
++F + E+ VSW ++I+ ++ AL+ F M++ ++ P+ T ++V+ AC++
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
E G + ELN + + + + G+ GKL + + S + D
Sbjct: 125 LPMPE-GLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVT 182
Query: 531 WGTLLCA-CKIHRNIEIGEYVAYRLFE-LEP 559
W T+L + C+ + +E EY+ + E +EP
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEP 213
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 300/564 (53%), Gaps = 14/564 (2%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
C + ++ +HGH+VK+ +D+FV T++V++Y +C A +LFD MPD++V +W
Sbjct: 86 CVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTW 145
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
A+I G L +F M +G T+ G+ A A+ + L + VH + I
Sbjct: 146 TALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIK 205
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD-S 242
G D S+ N+ Y K DL+ F+G + + V++W ++I C + + D
Sbjct: 206 YGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPD--KNVITWTTMISSCAEDENYLDLG 263
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L+ + M+ G P+ T+ S++S C + G+ V + G + ++ V N+ + +
Sbjct: 264 LSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYL 323
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ-----KGDLD------EALRLFFAME 351
Y + G+ D A LF+ M + ++W AMISGYAQ K DL +AL+LF +
Sbjct: 324 YLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLV 383
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ PDL T S++S C ALE G+ G +V+V +AL++MY+KCGSI
Sbjct: 384 RSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIE 443
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A + F +P +T V+WT+MI+G + +G +A+ LF M+ RPN +TF+++L AC+
Sbjct: 444 CATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACS 503
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
+AG +E+ YF++M Y + P ++HY CM D+ R G+L +A F++ + + IW
Sbjct: 504 YAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIW 563
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
+L+ C+ H N+E+ Y A RL EL+P YV + N+Y GRW VA +R + K
Sbjct: 564 SSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHE 623
Query: 592 QVKKFPGQSLVHINGKTCTFTVED 615
V +S + I K F +D
Sbjct: 624 DVGVLRDRSWIAIRDKVYFFRADD 647
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 218/452 (48%), Gaps = 26/452 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I +E AL +F M + P++ T + AC+ Q +HG+ +
Sbjct: 145 WTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSI 204
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ-MGFLEKVL 140
K + + ++ +Y K L+ + F PD++V +W MI A+ +L+ L
Sbjct: 205 KYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGL 264
Query: 141 CLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
LF +M G+ + +VM L A + +SL K V +F +G +A++ V N+ +
Sbjct: 265 SLFLDMLEGGVMPNEFTLTSVMSLCGARL---DMSLGKQVQAFCYKVGCEANLPVKNSTM 321
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-------------DSLN 244
Y + + A +F ++ ++++WN++I G Y D +L
Sbjct: 322 YLYLRKGETDEAMRLFEEMDSS--SIITWNAMISG--YAQIMDSAKDDLHARSRGFQALK 377
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+R ++ +PD+ T S+LS C AL QG +H++ I G DV V + L++MY+
Sbjct: 378 LFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYN 437
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCG I+ A F M RT V+WT+MISGY+Q G +A++LF M +G P+ +T +S
Sbjct: 438 KCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVS 497
Query: 365 MISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-E 422
++S C +G +E ++FD ++ V ++DM+ + G + DA E
Sbjct: 498 LLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFE 557
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
W++++AGC +G A +++EL
Sbjct: 558 PNEAIWSSLVAGCRSHGNMELAFYAADRLLEL 589
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M+ DG V LL CV L R +H H + G D+ V +L+++Y +C
Sbjct: 67 MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
AR LFDGM D+ V+WTA+I+G+ + AL +F M G P T+ M+S
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C + ++LG+ Y+ G + N+L +Y K G + F P+K V++W
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITW 246
Query: 429 TTMIAGCALNGEFVE-ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
TTMI+ CA + +++ L LF M+E + PN T +V+ C L+ G +
Sbjct: 247 TTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLC--GARLDMSLGK-QVQA 303
Query: 488 KVYQVNPELN---HYSCMADLLGRKGKLKEALDFVQSM 522
Y+V E N S M L RKG+ EA+ + M
Sbjct: 304 FCYKVGCEANLPVKNSTMY-LYLRKGETDEAMRLFEEM 340
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 9 RLNKIYRSSTINQWNSQIR---EAVD--KNEAH------KALLLFRRMKKNDIEPNNLTF 57
RL + SS+I WN+ I + +D K++ H +AL LFR + +++++P+ TF
Sbjct: 335 RLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTF 394
Query: 58 PFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
I C+ + + IH + +K+ SD+ V + +V+MY KC ++CA K F +MP
Sbjct: 395 SSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPT 454
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
R +W +MI G++Q G + + LF +M L G + + +T + L A +A
Sbjct: 455 RTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYA 505
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 300/574 (52%), Gaps = 21/574 (3%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDF--LYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
F ++ D+E + F F+ K C ++ + +QM+ + K F ++
Sbjct: 28 FEEARRGDLERD---FLFLLKKCISVNQLRQIQAQMLLHSVEKPNF---------LIPKA 75
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM-GFLEKVLCLFYNMRLVGIQADFVTV 158
+ + + LF + + S+N MI G E L L+ M+ G++ D T
Sbjct: 76 VELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTY 135
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ A + + + +SVHS +G++ DV + ++ I YAKC + A +F I E
Sbjct: 136 NFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE 195
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R VSWNS+I G + D+++ +R M +GF PD T+VS+L +C L GR
Sbjct: 196 --RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR 253
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
L+ I L + + LISMY KCGD+DSAR +F+ M + RV+WTAMI+ Y+Q G
Sbjct: 254 LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNG 313
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
EA +LFF ME G PD T+ +++S CG GALELGK + +A L+ N+ V
Sbjct: 314 KSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVAT 373
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
L+DMY KCG + +A +F A+P K +W MI A G EAL LF +M + P
Sbjct: 374 GLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPP 430
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ +TF+ VL AC HAG + +G YF+ M+ ++ + P++ HY+ + DLL R G L EA +F
Sbjct: 431 SDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF 490
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL-EPHSAAPYVEMANIYALGGR 577
++ P K D + +L AC +++ I E L E+ E +A YV +N+ A
Sbjct: 491 MERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKM 550
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
WD A +R +M+ V K PG S + I G+ F
Sbjct: 551 WDESAKMRALMRDRGVVKTPGCSWIEIEGELMEF 584
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 195/392 (49%), Gaps = 6/392 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N+ AL L+RRMK + ++P+ T+ F+ ACAKL + + +H + K D+ +
Sbjct: 111 NDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 170
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MYAKC ++ A KLFD++ +RD SWN+MI G+++ G+ + + LF M G +
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T++ + A H L + + I + + + IS Y KC DL A V
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + R V+W ++I + K ++ + M G PD T+ ++LS+C
Sbjct: 291 FNQMIKKDR--VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ + +H ++ V L+ MY KCG ++ A +F+ M + +W AMI+
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLK 391
YA +G EAL LF M P +T + ++S C +G + G ++F + GL
Sbjct: 409 AYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLV 465
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ +ID+ S+ G + +A E P K
Sbjct: 466 PKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 160/358 (44%), Gaps = 15/358 (4%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
++I T++ WNS I + A A+ LFR+M++ EP+ T + AC+ L D
Sbjct: 190 FDEITERDTVS-WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+++ + F+ + ++ MY KC LD A ++F++M +D +W AMI
Sbjct: 249 LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITV 308
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
++Q G + LF+ M G+ D T+ + A L L K + + + + +
Sbjct: 309 YSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHN 368
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V + Y KC ++ A VF + ++ +WN++I + ++L + M
Sbjct: 369 IYVATGLVDMYGKCGRVEEALRVFEAMP--VKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
P T + +LS+CV + QG R H +G + +I + S+ G
Sbjct: 427 ---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGM 483
Query: 309 IDSA-RFL--FDGMCDRTRVSWTAMISGYAQKGDL---DEALRLFFAMEAAGEVPDLV 360
+D A F+ F G D + A++ ++ D+ ++A+R+ M+ A + V
Sbjct: 484 LDEAWEFMERFPGKPD--EIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 306/576 (53%), Gaps = 34/576 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVD---MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++IH ++K+ + + + +++ + D L A +FD + + ++ WN M G
Sbjct: 19 RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A L L+ M +G+ + T L +A +K + +H + +G D D+
Sbjct: 79 ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138
Query: 191 SVCNTWISAYAKCNDLKMAELVF-----RGI------------------------EEGLR 221
V + I+ Y K + A VF R + E ++
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSWN++I G + ++L ++ M+ +PD +T+V++LS+C ++ GR VH
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S +GF ++ ++N LI +Y KCG++++A LF+G+ + +SW +I GY
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYK 318
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNA 399
EAL LF M +GE P+ VT+LS++ C GA+++G+W Y G+ + + +
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY+KCG I A+++F ++ +++ SW MI G A++G A D+F +M + + P+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPD 438
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TF+ +L AC+H+G L+ G F MT+ Y++ P+L HY CM DLLG G KEA + +
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
SM + D IW +LL ACK+H N+E+GE A L ++EP ++ YV ++NIYA GRW+
Sbjct: 499 NSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWN 558
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA R ++ +KK PG S + I+ F + D
Sbjct: 559 EVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 256/531 (48%), Gaps = 66/531 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R ++ AL L+ M + PN+ TFPF+ KACAK F Q IHGH++
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVL 130
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLD-------------------------------CAYK 110
K D++V T+++ MY K R + A K
Sbjct: 131 KLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQK 190
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD++P +DV SWNA+I G+A+ G ++ L LF M ++ D T++ + A +
Sbjct: 191 MFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSAS 250
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G +++ + N I Y KC +++ A +F G+ + V+SWN++I
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGL--SYKDVISWNTLI 308
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 309 GGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 368
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S+ +LI MY+KCGDI++A+ +FD M +R+ SW AMI G+A G + A +F
Sbjct: 369 VSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFS 428
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDM 403
M G PD +T + ++S C SG L+LG+ ++Y + L+ +ID+
Sbjct: 429 RMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEH----YGCMIDL 484
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
G +A E+ ++ + V W +++ C ++G VE + F Q + + + P
Sbjct: 485 LGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGN-VELGESFAQNL-IKIEP---- 538
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
K G + L++ +Y N + LL KG K
Sbjct: 539 ---------------KNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKK 574
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 131/308 (42%), Gaps = 39/308 (12%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF---LFDG 318
+SLL +C ++L R++H+ I G ++ LI D + +FD
Sbjct: 6 LSLLHNCKTLQSL---RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + + W M G+A D AL L+ M + G VP+ T ++ C +S A G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + G ++ V +LI MY K G DAR++F + VVS+T +I G A N
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182
Query: 439 -------------------------------GEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + EAL+LF +MM+ +++P+ T + VL
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC + +E G + + + L + + DL + G+++ A + + K D
Sbjct: 243 SACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK-D 300
Query: 528 AGIWGTLL 535
W TL+
Sbjct: 301 VISWNTLI 308
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 300/574 (52%), Gaps = 21/574 (3%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDF--LYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
F ++ D+E + F F+ K C ++ + +QM+ + K F ++
Sbjct: 24 FEEARRGDLERD---FLFLLKKCISVNQLRQIQAQMLLHSVEKPNF---------LIPKA 71
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM-GFLEKVLCLFYNMRLVGIQADFVTV 158
+ + + LF + + S+N MI G E L L+ M+ G++ D T
Sbjct: 72 VELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTY 131
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ A + + + +SVHS +G++ DV + ++ I YAKC + A +F I E
Sbjct: 132 NFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE 191
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R VSWNS+I G + D+++ +R M +GF PD T+VS+L +C L GR
Sbjct: 192 --RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR 249
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
L+ I L + + LISMY KCGD+DSAR +F+ M + RV+WTAMI+ Y+Q G
Sbjct: 250 LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNG 309
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
EA +LFF ME G PD T+ +++S CG GALELGK + +A L+ N+ V
Sbjct: 310 KSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVAT 369
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
L+DMY KCG + +A +F A+P K +W MI A G EAL LF +M + P
Sbjct: 370 GLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPP 426
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ +TF+ VL AC HAG + +G YF+ M+ ++ + P++ HY+ + DLL R G L EA +F
Sbjct: 427 SDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF 486
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL-EPHSAAPYVEMANIYALGGR 577
++ P K D + +L AC +++ I E L E+ E +A YV +N+ A
Sbjct: 487 MERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKM 546
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
WD A +R +M+ V K PG S + I G+ F
Sbjct: 547 WDESAKMRALMRDRGVVKTPGCSWIEIEGELMEF 580
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 195/392 (49%), Gaps = 6/392 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N+ AL L+RRMK + ++P+ T+ F+ ACAKL + + +H + K D+ +
Sbjct: 107 NDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 166
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MYAKC ++ A KLFD++ +RD SWN+MI G+++ G+ + + LF M G +
Sbjct: 167 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 226
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T++ + A H L + + I + + + IS Y KC DL A V
Sbjct: 227 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 286
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + R V+W ++I + K ++ + M G PD T+ ++LS+C
Sbjct: 287 FNQMIKKDR--VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 344
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ + +H ++ V L+ MY KCG ++ A +F+ M + +W AMI+
Sbjct: 345 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 404
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLK 391
YA +G EAL LF M P +T + ++S C +G + G ++F + GL
Sbjct: 405 AYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLV 461
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ +ID+ S+ G + +A E P K
Sbjct: 462 PKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 493
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 160/358 (44%), Gaps = 15/358 (4%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
++I T++ WNS I + A A+ LFR+M++ EP+ T + AC+ L D
Sbjct: 186 FDEITERDTVS-WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 244
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+++ + F+ + ++ MY KC LD A ++F++M +D +W AMI
Sbjct: 245 LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITV 304
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
++Q G + LF+ M G+ D T+ + A L L K + + + + +
Sbjct: 305 YSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHN 364
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V + Y KC ++ A VF + ++ +WN++I + ++L + M
Sbjct: 365 IYVATGLVDMYGKCGRVEEALRVFEAMP--VKNEATWNAMITAYAHQGHAKEALLLFDRM 422
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
P T + +LS+CV + QG R H +G + +I + S+ G
Sbjct: 423 ---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGM 479
Query: 309 IDSA-RFL--FDGMCDRTRVSWTAMISGYAQKGDL---DEALRLFFAMEAAGEVPDLV 360
+D A F+ F G D + A++ ++ D+ ++A+R+ M+ A + V
Sbjct: 480 LDEAWEFMERFPGKPD--EIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 535
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 316/598 (52%), Gaps = 9/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + A + + F MK++ +P+ TF I ACA L + +H ++
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMI 437
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F S++FV +VDMYAK L A K F+ M D SWNA+IVG+ Q + ++
Sbjct: 438 KNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFF 497
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G+ D V++ + A + + L + H + +G+D ++ I Y
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYV 557
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A VF + R VVS N++I G T G +++++ ++ + G +P T
Sbjct: 558 KCGVVLAARDVFYSMPS--RNVVSVNALIAGYTMG-HLEEAIHLFQEIQMVGLKPTEVTF 614
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS--VINTLISMYSKCGD-IDSARFLFDG 318
LL C L GR +H + +GF L S V +L+ +Y +DS +
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGF-LSSSEMVCVSLLCLYMNSQRFVDSETLFSEL 673
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ V WTA+ISGYAQ+ ++AL+ + M + +PD S++ C +L+ G
Sbjct: 674 QYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNG 733
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCAL 437
+ + G + + C++LIDMY+KCG + + ++F +P + V+SW +MI G A
Sbjct: 734 QEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAK 793
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG EAL++F QM + + P+ VTFL VL AC+HAG + +G F+LM Y++ P ++
Sbjct: 794 NGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVD 853
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
H CM D+LGR G L EA +F+ + K+D +W TLL AC+ H + G+ A +L EL
Sbjct: 854 HLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMEL 913
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+P S++ YV +++IYA W G +LR MK VKK PG S + G+ + T+++
Sbjct: 914 KPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE-PGRDSSCTIQE 970
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 255/518 (49%), Gaps = 10/518 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + A +A+ F +KK ++ + + A A LS Y M+H
Sbjct: 277 WNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAT 336
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K +++V + +V+MYAKC ++D A ++F+ + +R++ WNAM+ GFAQ G ++V+
Sbjct: 337 KEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVME 396
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ G Q D T + A +L+ +H+ I +++ V N + YA
Sbjct: 397 FFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYA 456
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K LK A F ++ + VSWN+II G + D++ +R M+ +G PD ++
Sbjct: 457 KSGALKEARKQFELMK--IHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSL 514
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S++S+C + L +G+ H + G D ++LI MY KCG + +AR +F M
Sbjct: 515 ASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPS 574
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VS A+I+GY G L+EA+ LF ++ G P VT ++ GC + L LG+
Sbjct: 575 RNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 382 DNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
G L + MVC +L+ +Y D+ LF L K +V WT +I+G A
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+AL + M ++ P++ F +VL+AC L+ G +L ++ ++
Sbjct: 694 HHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSL---IFHTGFNMDEV 750
Query: 500 SC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+C + D+ + G +K +L + MP +++ W +++
Sbjct: 751 TCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 157/546 (28%), Positives = 254/546 (46%), Gaps = 46/546 (8%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D T+V+ Y RL A KLF ++P+ +V +WN MI G A+ GF E+ + F ++
Sbjct: 242 DQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G++A ++ + A L+ VH+ G+D +V V + ++ YAKC+ +
Sbjct: 302 KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMD 361
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF + E R +V WN+++GG + + F+ M G +PD T S+ S+
Sbjct: 362 AAKQVFNSLGE--RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSA 419
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C L G +H+ I F ++ V N L+ MY+K G + AR F+ M VSW
Sbjct: 420 CASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSW 479
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
A+I GY Q+ DEA +F M + G +PD V++ S++S C L+ G+
Sbjct: 480 NAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVK 539
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
GL + ++LIDMY KCG + AR++FY++P + VVS +IAG + G EA+ L
Sbjct: 540 VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHL 598
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---------WGYFNLMTKV--------- 489
F ++ + L+P VTF +L C A L G WG+ + V
Sbjct: 599 FQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYM 658
Query: 490 --------------YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWG 532
Q L ++ + ++ ++AL F Q M I D +
Sbjct: 659 NSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFA 718
Query: 533 TLLCAC----KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL-RTM 587
++L AC + EI + + F ++ + + ++M YA G G + R M
Sbjct: 719 SVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDM---YAKCGDVKGSLQVFREM 775
Query: 588 MKRNQV 593
+RN V
Sbjct: 776 PRRNNV 781
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 231/505 (45%), Gaps = 38/505 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + +D + F M +++ PN TF + AC+ L D + + +H +
Sbjct: 110 WNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVF 169
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F F Q ++DMYAKC L A +FD + D SW A+I G+ + GF + +
Sbjct: 170 KTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVK 229
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ VG D +T++ T ++AY
Sbjct: 230 VFDRMQRVGHAPDQITLV-----------------------------------TVVNAYV 254
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
L A +F I VV+WN +I G +++++F+ + G + +++
Sbjct: 255 ALGRLADARKLFTQIPN--PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+ L G +VH+ G D +V V + L++MY+KC +D+A+ +F+ + +
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V W AM+ G+AQ G E + F M+ G PD T S+ S C L G
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQL 432
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N+ V NAL+DMY+K G++ +AR+ F + VSW +I G
Sbjct: 433 HTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYN 492
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA +F +M+ + P+ V+ +++ AC + L++G L+ KV ++ S
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKV-GLDTSTCAGSS 551
Query: 502 MADLLGRKGKLKEALDFVQSMPIKS 526
+ D+ + G + A D SMP ++
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPSRN 576
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 137/309 (44%), Gaps = 37/309 (11%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
LS K +HS + IGV + N + Y KC ++ A+ F +E+ + V +WNS++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEK--KDVFAWNSVL 114
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
F + + M RP+ T +LS+C + + GR VH GF
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
LI MY+KC + AR +FDG + VSWTA+I+GY + G EA+++F M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G PD +T+++ +++ Y G +
Sbjct: 235 QRVGHAPDQITLVT-----------------------------------VVNAYVALGRL 259
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
DAR+LF +P VV+W MI+G A G EA+ F ++ + L+ R + +VL A
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319
Query: 471 THAGFLEKG 479
L G
Sbjct: 320 ASLSMLNYG 328
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 8/269 (2%)
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+AL +++HS + G L + N ++ +Y KCG++D A+ F + + +W +++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
S Y G ++ F M P+ T ++S C + G+ G
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
LIDMY+KC + DAR +F VSWT +IAG +G +EA+ +F +M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
+ P+++T + V+ A G L F + NP + ++ M ++G
Sbjct: 235 QRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRGF 289
Query: 512 LKEALDF---VQSMPIKSDAGIWGTLLCA 537
+EA+ F ++ +K+ G++L A
Sbjct: 290 AEEAISFFLELKKTGLKATRSSLGSVLSA 318
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 308/595 (51%), Gaps = 3/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I +AL ++ ++ + I P++ T + A A L Q +HG
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFT 233
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS S V ++ MY K R A ++FD+M RD ++N MI G+ ++ +E+ +
Sbjct: 234 LKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESV 293
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F L + D +TV + A H + LSL K ++++ + G + +V N I Y
Sbjct: 294 KMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVY 352
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC D+ A VF +E + VSWNSII G +++ ++ M+ + D T
Sbjct: 353 AKCGDMITARDVFNSME--CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ L+S L G+ +HS+GI G +D+SV N LI MY+KCG++ + +F+ M
Sbjct: 411 YLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG 470
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
V+W +IS + GD L++ M VPD+ T L + C A LGK
Sbjct: 471 TLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G + + + NALI+MYSKCG + + +F + + VV+WT MI + GE
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+AL+ F M + + P+ V F+A++ AC+H+G +EKG F M Y+++P + HY+
Sbjct: 591 GEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYA 650
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R K+ +A +F+Q+MPI+ DA IW ++L AC+ ++E E V+ R+ EL P
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +N YA +WD V+ +R ++ +KK PG S + I K F D
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGD 765
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 171/573 (29%), Positives = 295/573 (51%), Gaps = 11/573 (1%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
ASSL ++ + + WNS IR KAL + +++++ + P+ TFP + K
Sbjct: 56 ASSLSV-FRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIK 114
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
ACA L D +++ I++ F SD++V +VDMY++ L A ++FD+MP RD+ S
Sbjct: 115 ACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVS 174
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
WN++I G++ G+ E+ L +++ +R I D TV + A + + + +H F +
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTL 234
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
GV++ V N ++ Y K + A VF E +R V++N++I G + ++S
Sbjct: 235 KSGVNSVSVVNNGLLAMYLKFSRPTDARRVFD--EMVVRDSVTYNTMICGYLKLEMVEES 292
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
+ + + D F+PD+ TV S+L +C L + ++++ + GF L+ +V N LI +
Sbjct: 293 VKMFLENL-DQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDV 351
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+KCGD+ +AR +F+ M + VSW ++ISGY Q GDL EA++LF M E D +T
Sbjct: 352 YAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
L +IS + L+ GK + G+ ++ V NALIDMY+KCG +GD+ ++F ++
Sbjct: 412 LMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGT 471
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
V+W T+I+ C G+F L + QM + + P+ TFL L C G
Sbjct: 472 LDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
+ + + EL + + ++ + G L+ + + M + D W ++ A ++
Sbjct: 532 HCCLLR-FGYESELQIGNALIEMYSKCGCLESSFRVFERMS-RRDVVTWTGMIYAYGMYG 589
Query: 543 NIEIGEYVAYRLFELEPHSAAP--YVEMANIYA 573
GE ++E P V +A IYA
Sbjct: 590 E---GEKALESFVDMEKSGIVPDSVVFIALIYA 619
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 177/376 (47%), Gaps = 6/376 (1%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+++A + +L+ L+ +H+ I +G+D I Y+ + VFR +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPA- 68
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ V WNSII + F +L FY + PD T S++ +C G LV
Sbjct: 69 KNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
+ + GF+ D+ V N L+ MYS+ G + AR +FD M R VSW ++ISGY+ G
Sbjct: 129 YKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
+EAL ++ + + VPD TV S++ ++ G+ + G+ +V N L
Sbjct: 189 EEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGL 248
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV-EALDLFHQMMELDLRPN 459
+ MY K DAR +F + + V++ TMI G L E V E++ +F + ++ +P+
Sbjct: 249 LAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICG-YLKLEMVEESVKMFLENLD-QFKPD 306
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+T +VL AC H L +N M + V E + + D+ + G + A D
Sbjct: 307 ILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFV-LESTVKNILIDVYAKCGDMITARDVF 365
Query: 520 QSMPIKSDAGIWGTLL 535
SM K D W +++
Sbjct: 366 NSMECK-DTVSWNSII 380
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 300/561 (53%), Gaps = 6/561 (1%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
T + C+K +H ++K+ SD+F+ +++MYAKC A ++FD+M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
++++ SW+AMI G+ Q G + + L+ M LV + F +V+ A ++L +
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVI---SACASLSAVTLGQ 121
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+HS + G ++ V N+ IS Y KCN A VF E VS+N++I G
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPE--PNCVSYNALITGFVE 179
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+ + L F++ M G PD + +L C E L +G +H + D +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N +I+MYS+ I A F + ++ +SW +I+ + D + LR+F M
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299
Query: 356 V-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
V PD T S ++ C ++ GK + L ++ V NAL++MY+KCG IG A
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F + +VSW T+IAG +G A++LF QM +RP+ VTF+ +L AC HAG
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
++KG YFN M + Y + P++ H+SC+ D+LGR G+L EA ++++ P +D + +L
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSL 479
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L A ++H ++ IGE +A L +L+P + +PYV ++N+YA G WD VA R +K + +K
Sbjct: 480 LSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLK 539
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K PG SL+ +NG FT+ D
Sbjct: 540 KEPGHSLIEVNGSVEKFTIGD 560
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 213/424 (50%), Gaps = 8/424 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I E A+ L+ +M + PN F + ACA LS Q IH +
Sbjct: 72 WSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSL 128
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + S FV +++ MY KC++ A +F P+ + S+NA+I GF + LE+ L
Sbjct: 129 KFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLE 188
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F MR G+ D MG+ ++L +H + + +D+ + N I+ Y+
Sbjct: 189 FFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYS 248
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GFRPDVTT 260
+ N ++ AE FR IEE + V+SWN++I C++ D L ++HM + RPD T
Sbjct: 249 ELNLIQEAEKAFRLIEE--KDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFT 306
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S L++C ++ G+ +H+H + D+ V N L++MY+KCG I A +F M
Sbjct: 307 FTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMV 366
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK- 379
VSW +I+G+ G + A+ LF M A+G PD VT + +++ C +G ++ G+
Sbjct: 367 HHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQL 426
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALN 438
+F++ + G+ ++ + LIDM + G + +A E P V ++++ L+
Sbjct: 427 YFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLH 486
Query: 439 GEFV 442
G+ V
Sbjct: 487 GDVV 490
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 1/158 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDF 70
++ + WN+ I ++ K L +F+ M ++ ++ P++ TF ACA L+
Sbjct: 261 RLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASM 320
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ + IH H++++ + D+ V +V+MYAKC + AY +F KM ++ SWN +I GF
Sbjct: 321 SHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGF 380
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G E+ + LF M GI+ D VT +GL A HA
Sbjct: 381 GNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHA 418
>gi|225457491|ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
[Vitis vinifera]
gi|296087996|emb|CBI35279.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 319/614 (51%), Gaps = 35/614 (5%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ RS+ ++Q+ ++ + K + FR + N +L + + + A+ D +
Sbjct: 1 MLRSTGVSQFWAKTTSSPLKTTS------FRLIFTNSTHDEDL-YATLLRRFAETRDSQH 53
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H ++K P + +F+ +++MYAKC L A+KLFD P R+ SW+ +I GF Q
Sbjct: 54 GRALHAKLIKGPLHNSLFLNNHILNMYAKCGHLPHAHKLFDHFPHRNAVSWSVLIAGFVQ 113
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL-----------------SLLK 175
L LF M G+ + T++ +A+HA L S L
Sbjct: 114 HNRPSCALVLFSQMHAAGVNINEFTLV----SALHACSLYDNDSDNNEGYYYSYYLSRLY 169
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
V++F + +G + +V + N +++A + L A VF + VVSWN+++ G
Sbjct: 170 QVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEALEVFEACRG--KDVVSWNAVMAGLV- 226
Query: 236 GDKF--DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+F + F+R M +G +PD +LS G VH + G +V
Sbjct: 227 --QFCCGEVPGFWRRMCCEGVKPDNFAFSGVLSGLAALGDGGMGVQVHGQLVKCGHGGEV 284
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ N+L+ MY KCG +++ F+ M +R +W M +G G AL L M +
Sbjct: 285 CIGNSLVDMYLKCGSLENGIKAFEEMVERDVCTWNQMAAGCLNCGKPGRALELIEEMRRS 344
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G + T+ + ++ C +LE GK G +V V NAL+DMY+KCGS+GDA
Sbjct: 345 GVRMNKFTLATALTACANLASLEEGKKAHGLRIKLGNDVDVCVDNALLDMYAKCGSMGDA 404
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
++F + ++VVSWTTMI G A NG+ +AL++F QM PN +TF+ VL AC+
Sbjct: 405 LKVFGTVEARSVVSWTTMIMGFAQNGQARKALEIFEQMRAEGKAPNYITFICVLYACSQG 464
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G + +GW YF M + + ++P +HY+CM D+LGR G +KEA + ++ MP ++ +W T
Sbjct: 465 GLINEGWEYFLSMDRDHGISPGEDHYACMVDMLGRAGHIKEARELIRRMPFQASVLVWQT 524
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL AC++H ++E G A + L+ H ++ YV ++N++A G W GV +LR +M+ V
Sbjct: 525 LLGACRVHGDVETGLLAAKQALSLDKHDSSTYVVLSNMFADGRNWKGVGSLRELMETRDV 584
Query: 594 KKFPGQSLVHINGK 607
KK PG S + +N +
Sbjct: 585 KKMPGSSWIQLNKR 598
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 296/552 (53%), Gaps = 3/552 (0%)
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
A KL D Q IH I+ S + F+ ++++ Y C L A ++F P ++V
Sbjct: 28 ASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNV 87
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SW +I G A+ + + +F M + + + VT+ + A + + + KSVH F
Sbjct: 88 VSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ G + +V V + Y+K + +A +F + E R VVSWN+I+ G + +
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE--RNVVSWNAIVSGYSDHGFSE 205
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++++ + M G D T++SL+ + + L G +H I G++ D + L+
Sbjct: 206 EAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALM 265
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DL 359
+Y +D A +F M + +WT M++G++ D A++ F M + D
Sbjct: 266 DIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS 325
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+ ++ ++S C SGAL+ G+ A +N+ V +A+IDMY+ CG++ DA+ FY
Sbjct: 326 IVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ EK VV W MIAG +NG +A+DLF QM L P+ TF++VL AC+HAG + +G
Sbjct: 386 MGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEG 445
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
F M K P L HY+C+ D+LGR G+L A F+ +MP + D ++ TLL AC+
Sbjct: 446 LQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACR 505
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
IH NI++G ++ ++FE+EP+ A YV ++N+YAL G W+GV R ++ ++KK PG
Sbjct: 506 IHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGF 565
Query: 600 SLVHINGKTCTF 611
S + IN + TF
Sbjct: 566 SSIEINQEIYTF 577
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 219/434 (50%), Gaps = 7/434 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ +FR M + +PN +T + A A L ++ +H V+ F ++FV+T +V
Sbjct: 105 EAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
DMY+K + A +LF+ M +R+V SWNA++ G++ GF E+ + LF MR G+ DF
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFY 224
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+M L A++ L + +H F I G + D + + Y N + A VF
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFS-- 282
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALV 275
E ++ V +W ++ G + G +D ++ + M+ + D ++ +LSSC AL
Sbjct: 283 EMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQ 342
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
QGR VH+ I F ++ V + +I MY+ CG+++ A+ F GM ++ V W AMI+G
Sbjct: 343 QGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNG 402
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 394
G +A+ LF M+ +G PD T +S++ C +G + G + F + + N+
Sbjct: 403 MNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNL 462
Query: 395 MVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ID+ + G + A +P + ++T++ C ++G ++ ++ E
Sbjct: 463 QHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFE 522
Query: 454 LDLRPNRVTFLAVL 467
++ PN + +L
Sbjct: 523 ME--PNDAGYYVLL 534
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 147/302 (48%), Gaps = 8/302 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + D + +A+ LF M++ + + T + A + IHG I+
Sbjct: 191 WNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFII 250
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + +D ++T ++D+Y + +D A+++F +M +DVA+W M+ GF+ ++ +
Sbjct: 251 RTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIK 310
Query: 142 LFYNMRLVGIQA---DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
F M +GIQ D + +MG+ + H+ L + VH+ I ++ V + I
Sbjct: 311 HFNKM--LGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVID 368
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YA C +L+ A+ F G+ E + VV WN++I G D+++ + M G PD
Sbjct: 369 MYANCGNLEDAKRFFYGMGE--KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDE 426
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFD 317
+T VS+L +C + +G + H + D+ ++ +I + + G +D+A +
Sbjct: 427 STFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFIN 486
Query: 318 GM 319
M
Sbjct: 487 NM 488
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 319/601 (53%), Gaps = 12/601 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ WNS + + ++ AL FR M + + P+ +F A A+ + H
Sbjct: 82 VASWNSLL-NPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAH 140
Query: 78 GHIVKSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
K P S+++V T++++MY K + A ++FD MP R+ SW+ M+ G+A
Sbjct: 141 ALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCS 200
Query: 137 EKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSV 192
E+ LF M +++FV L+ ++ L LL + +H + G+ VSV
Sbjct: 201 EEAFDLFRLMLEECPSEKSEFVATAVLSAVSVP---LGLLMGEQMHGLIVKDGLLDFVSV 257
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ ++ YAK + A VF E R ++W+++I G + D +++ + M
Sbjct: 258 ENSLVTMYAKAGCMGAAFHVFESSRE--RNSITWSAMITGYAQNGEADSAVSMFSQMHAA 315
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
GF P T V +L++ AL G+ H + GF++ + V + L+ MY+KCG I A
Sbjct: 316 GFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADA 375
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ FD + + V WTAM+SG+ Q G+ +EAL L+ M+ G +P T+ S + C
Sbjct: 376 KEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGI 435
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
ALE GK GL V +AL MYSKCG++ D +F +P++ V++W ++I
Sbjct: 436 AALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSII 495
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G + NG ALDLF +M P+ +TF+ +L AC+H G +++GW YF+LMTK Y +
Sbjct: 496 SGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGL 555
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P L+HY+CM D+L R G LKEA DF++S+ I +W +L AC+ R+ ++G Y
Sbjct: 556 TPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGE 615
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
RL EL ++ Y+ ++NIYA +W+ V +R +M+ V K PG S V +N + F
Sbjct: 616 RLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFV 675
Query: 613 V 613
V
Sbjct: 676 V 676
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 231/470 (49%), Gaps = 10/470 (2%)
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR--LDCAYKLFDKMPD--RDVASWNAMI 127
+ + +H +KS S V ++++ Y+ R L A+ +FD +P RDVASWN+++
Sbjct: 30 HGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLL 89
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-GV 186
++ L+ + + + + AA A + H+ I
Sbjct: 90 NPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSA 149
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
++V VC + ++ Y K + A +F G+ + R SW++++ G +++ + +
Sbjct: 150 VSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQ--RNSFSWSTMVAGYAAEKCSEEAFDLF 207
Query: 247 RHMIYDGFRPDVTTVVS-LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
R M+ + V + +LS+ P L+ G +H + G VSV N+L++MY+K
Sbjct: 208 RLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAK 267
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
G + +A +F+ +R ++W+AMI+GYAQ G+ D A+ +F M AAG P T + +
Sbjct: 268 AGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGV 327
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
++ GAL +GK G + + V +AL+DMY+KCG I DA+E F L E +
Sbjct: 328 LNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDI 387
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
V WT M++G NGE EAL L+ +M + + P++ T + L+AC LE G
Sbjct: 388 VLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQ 447
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ K Y + S ++ + + G L++ + + +P + D W +++
Sbjct: 448 IVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSII 495
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 289/586 (49%), Gaps = 45/586 (7%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS--------QMIHGHIVKSPFWSDI 89
AL LF RM ++ + + ++ + ACA+ YS Q IH +V+ F SD
Sbjct: 226 ALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQ 285
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
V +++DMY KC +D A K+F+ +P + SWN +I GF Q G K + + M+
Sbjct: 286 HVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEA 345
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
G + + VT L + I A+ D+ A
Sbjct: 346 GFEPNEVTYSNLLASCIKAR-----------------------------------DVHSA 370
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+F I +V +WN+++ G ++ D++ +R M + +PD TT+ +LSSC
Sbjct: 371 RAMFDKISR--PSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCS 428
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
L GR VHS + + D+ V + L+ MYSKCG I AR +F+ M +R V W +
Sbjct: 429 KLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNS 488
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+ISG EA F M G +P + SMI+ C + ++ G+ G
Sbjct: 489 IISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDG 548
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
NV V +ALIDMY+KCG++ DAR F + K +V+W MI G A NG +A++LF
Sbjct: 549 YDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFE 608
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
M+ + +P+ VTF+AVL C+H+G ++K +FN M Y + P HY+C+ D LGR
Sbjct: 609 YMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRA 668
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G+ E + MP K D IW LL AC +H N E+G+ A LF ++P + +PYV ++
Sbjct: 669 GRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLS 728
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIYA GR + +R +M V K G S + F V D
Sbjct: 729 NIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 774
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 197/425 (46%), Gaps = 39/425 (9%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S TI WN I + KA+ + M++ EPN +T+ + +C K D
Sbjct: 313 SVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARD------ 366
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H A +FDK+ V +WN ++ G+ Q
Sbjct: 367 VHS-----------------------------ARAMFDKISRPSVTTWNTLLSGYCQEEQ 397
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + LF M+ +Q D T+ + + L + VHS + + D+ V +
Sbjct: 398 HQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASG 457
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y+KC + +A +F + E R VV WNSII G T ++ +F++ M +G
Sbjct: 458 LVDMYSKCGQIGIARSIFNKMTE--RDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIM 515
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P ++ S+++SC ++ GR +H+ + G+D +V V + LI MY+KCG++D AR
Sbjct: 516 PTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLF 575
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M + V+W MI GYAQ G D+A+ LF M + PD VT +++++GC SG +
Sbjct: 576 FDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLV 635
Query: 376 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIA 433
+ +F++ S G+ LID + G + L + +P K + W ++A
Sbjct: 636 DKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLA 695
Query: 434 GCALN 438
C ++
Sbjct: 696 ACVVH 700
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 178/370 (48%), Gaps = 21/370 (5%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC--TYGDKFDDSLNFYRHMIY 251
N +SA + DL A + G+ R VSWN++I + GD +++ Y M
Sbjct: 78 NAALSAACRAGDLDAARDLLGGMPR--RNAVSWNTVISALARSPGDG-GEAVEMYGRMRA 134
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G P T+ S+LS+C AL GR H + G D + V N L+ MY+KCG +
Sbjct: 135 EGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGD 194
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A LF GM VS+TAM+ G AQ G +D+ALRLF M +G D V+V S++ C Q
Sbjct: 195 AVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQ 254
Query: 372 --------SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ A LG+ G + V N+LIDMY+KC + +A ++F +LP
Sbjct: 255 ACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSV 314
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
T+VSW +I G G +A+++ M E PN VT+ +L +C A + F
Sbjct: 315 TIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMF 374
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKI 540
+ +++ P + ++ + ++ + ++ ++ + M ++ D +L +C
Sbjct: 375 DKISR-----PSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSK 429
Query: 541 HRNIEIGEYV 550
++ G V
Sbjct: 430 LGILDFGRQV 439
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+KI R S + WN+ + + + + LFRRM+ +++P+ T I +C+KL
Sbjct: 374 FDKISRPS-VTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGI 432
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H V+ +D+FV + +VDMY+KC ++ A +F+KM +RDV WN++I G
Sbjct: 433 LDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISG 492
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
++ F MR GI + + + + + +H+ + G D +
Sbjct: 493 LTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQN 552
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + I YAKC ++ A L F + ++ +V+WN +I G D ++ + +M
Sbjct: 553 VYVGSALIDMYAKCGNMDDARLFFDTMM--MKNIVAWNEMIHGYAQNGLGDKAVELFEYM 610
Query: 250 IYDGFRPDVTTVVSLLSSC 268
+ +PD T +++L+ C
Sbjct: 611 LTTEQKPDAVTFIAVLTGC 629
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 102/214 (47%), Gaps = 32/214 (14%)
Query: 292 DVSVINTLISMYS-------------------------------KCGDIDSARFLFDGMC 320
D + N L+ +YS + GD+D+AR L GM
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101
Query: 321 DRTRVSWTAMISGYAQK-GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R VSW +IS A+ GD EA+ ++ M A G +P T+ S++S CG AL G+
Sbjct: 102 RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGR 161
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
A GL N V NAL+ MY+KCGS+GDA LFY + VS+T M+ G A G
Sbjct: 162 RCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTG 221
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+AL LF +M + + V+ +VL AC A
Sbjct: 222 SIDDALRLFARMCRSGVPVDPVSVSSVLGACAQA 255
>gi|147844641|emb|CAN82148.1| hypothetical protein VITISV_043500 [Vitis vinifera]
Length = 662
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 319/629 (50%), Gaps = 65/629 (10%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC---AKLSDFLYS-- 73
I+ ++S + + ++ A + FRR+ +++++P++LTF + KA A S + S
Sbjct: 30 ISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSPN 89
Query: 74 -----QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
I H+ KS F +++ T +D Y K + A LF++MP RDV SWNA+I
Sbjct: 90 XKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALIC 149
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+++ G+ L +F M G +L + H FGI G+D
Sbjct: 150 GYSRNGYDYDALEVFVQMLREGFPP---------------CQRTLGRLFHGFGIKSGLDL 194
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
D V N S YAKC DL+ AE++F I E +T VSWN++IG FD+++ ++
Sbjct: 195 DCRVKNALTSMYAKCADLQAAEVLFEEIFE--KTEVSWNTMIGAYGQNGLFDEAMLVFKQ 252
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M + + T++SLLS+ ++ H + I GF D SVI +L+ Y+ CG+
Sbjct: 253 MQKERVEVNYVTIISLLSANAHLDS------THCYVIKTGFATDASVITSLVCSYAGCGN 306
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
I+SA L++ M R VS TAMISGYA+KG++ + F M PD V ++S++ G
Sbjct: 307 IESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHG 366
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
+ G Y GL + +V N LI MYSK G I LF + EK ++SW
Sbjct: 367 FTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISW 426
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE----------- 477
++I+ C G +A++LF QM P+ +T ++L C+ GFL+
Sbjct: 427 NSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLR 486
Query: 478 ---------------------KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
KG YF M + + + P L H +CM DLL R G L+EA+
Sbjct: 487 NNLDMEDFLETALVRHVYQVWKGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAV 546
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
FV++M ++ D+ WG LL +C IH+ +++GE +A RL L+ +S YV M+N+YA G
Sbjct: 547 IFVKNMEVEPDSAXWGALLTSCCIHQELKLGECLAKRLLLLDYNSGGLYVLMSNLYASKG 606
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
RWD VA +R MMK G SL+ ++
Sbjct: 607 RWDDVARVRKMMKDTGGDGSSGISLIEVS 635
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/592 (31%), Positives = 306/592 (51%), Gaps = 4/592 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + V+ + +A ++ +M ++ + PN TF + A + Y +++H H++
Sbjct: 186 WTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLI 245
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ ++T +VDMY+KC R+ A K+ + P+ DV W +I GF Q + + +
Sbjct: 246 MFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAIS 305
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F +M L G+ + T L A+ L L + HS I +G++ D+ + N + Y
Sbjct: 306 VFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYM 365
Query: 202 KCNDLKM-AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC+ + A VFR I V+ W S+I G + +DS + M G RP+ T
Sbjct: 366 KCSHITTNAVKVFREITSP--NVMCWTSLIAGFAE-KRLEDSFQLFAEMQAAGVRPNSFT 422
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ ++L +C +LV ++H H I D+D++V N L+ Y+ G ID A + M
Sbjct: 423 MSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMN 482
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R +++T + + QKG AL++ M G D ++ S +S G +E GK
Sbjct: 483 LRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQ 542
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y+ G + V N+L+ +YSKCGSI DA F + E SW +I+G + NG
Sbjct: 543 LHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGL 602
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL F M ++P+ +T L+++ AC+H G LE G YF+ M K Y + P+L+HY
Sbjct: 603 ISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYM 662
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR G+L+EA+ ++ M K D+ I TLL AC +H N+ +GE +A R EL+P
Sbjct: 663 CLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPS 722
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
A Y+ +AN+Y G D R +M+ +++ PGQ + I + F+
Sbjct: 723 DPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFS 774
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 213/451 (47%), Gaps = 3/451 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH I+K D+++ ++ +YAK + A LFD+MP+RDV SW ++ +
Sbjct: 36 IHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKH 95
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
L LF M G + T+ ++ +H + +G++ + V +
Sbjct: 96 HSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTS 155
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y KC + + + VVSW +++ K+ ++ Y MI G
Sbjct: 156 LVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVY 215
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T V LL + L G+L+H+H I +G +L++ + ++ MYSKC + A +
Sbjct: 216 PNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKV 275
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+ + WT +ISG+ Q + EA+ +F ME +G +P+ T S+++ +L
Sbjct: 276 SNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSL 335
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI-GDARELFYALPEKTVVSWTTMIAG 434
+LG+ F + GL+D++ + NAL+DMY KC I +A ++F + V+ WT++IAG
Sbjct: 336 DLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAG 395
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A ++ LF +M +RPN T A+L AC+ L + K +V+
Sbjct: 396 FA-EKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKT-KVDI 453
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
++ + + D G + EA + +M ++
Sbjct: 454 DIAVANALVDTYAGVGMIDEAWSVIGTMNLR 484
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 204/461 (44%), Gaps = 6/461 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + AL LF M + PN T ++C L +F IH V
Sbjct: 83 WTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAV 142
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDC-AYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKV 139
K + FV T++V+ Y KC A+KL + D DV SW M+ + G +
Sbjct: 143 KLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEA 202
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
++ M G+ + T + L A LS K +H+ I G + ++ + +
Sbjct: 203 FEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDM 262
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y+KC + A V E V W ++I G T + ++++ +R M G P+
Sbjct: 263 YSKCRRMVDAIKVSNLTPE--YDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNF 320
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS-ARFLFDG 318
T SLL++ +L G HS I G + D+ + N L+ MY KC I + A +F
Sbjct: 321 TYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFRE 380
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + WT++I+G+A+K L+++ +LF M+AAG P+ T+ +++ C ++ +L
Sbjct: 381 ITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPT 439
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + ++ V NAL+D Y+ G I +A + + + +++T + A
Sbjct: 440 MMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQK 499
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
G AL + M ++ + + + L A G +E G
Sbjct: 500 GHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETG 540
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 156/303 (51%), Gaps = 12/303 (3%)
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T + +LS C +L +G +HS I G D+ + N L+S+Y+K + AR LFD M
Sbjct: 17 TCLRVLSFCN-SNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEM 75
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+R VSWT ++S + + +AL+LF M +GE P+ T+ S + C G E G
Sbjct: 76 PNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGM 135
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCG--SIGDARELFYALPEKTVVSWTTMIAGCAL 437
A GL+ N V +L++ Y+KCG S+ + L VVSWTTM++
Sbjct: 136 QIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVE 195
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG++ EA +++ +M+E + PN TF+ +L A + FL +G L + ELN
Sbjct: 196 NGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVS--SFLGLSYGKL-LHAHLIMFGAELN 252
Query: 498 HY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA-YRL 554
+ + D+ + ++ +A+ V ++ + D +W TL+ +N+++ E ++ +R
Sbjct: 253 LVLKTAVVDMYSKCRRMVDAIK-VSNLTPEYDVYLWTTLISG--FTQNLQVREAISVFRD 309
Query: 555 FEL 557
EL
Sbjct: 310 MEL 312
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 302/596 (50%), Gaps = 3/596 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + L M+++ ++ TF I K A + Q +H ++
Sbjct: 62 WNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVML 121
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++F + ++DMYAKC R+D Y +F MP+R+ SWN ++ ++++G +
Sbjct: 122 KVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFW 181
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ M L G++ D TV L +A L +H + G++ +VCN I+AY+
Sbjct: 182 VLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYS 241
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L+ AE VF G R +V+WNS++G +K D + + M GF PD T
Sbjct: 242 ECCSLQDAERVFDGAVL-CRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTY 300
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARFLFDGM 319
++ +C E G+ +H I G D V V N LISMY + D ++ A +F M
Sbjct: 301 TGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSM 360
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ +W ++++GY Q G ++ALRLF M D T ++I C L+LG+
Sbjct: 361 DLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQ 420
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
F A G N V ++LI MYSKCG I DAR+ F A + + W ++I G A +G
Sbjct: 421 QFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHG 480
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ ALDLF+ M E ++ + +TF+AVL AC+H G +E+G + M + + P HY
Sbjct: 481 QGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHY 540
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C DL GR G LK+A V++MP + DA + TLL AC+ +IE+ +A L ELEP
Sbjct: 541 ACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLELEP 600
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++ +Y W A++ MM+ VKK PG S + + F ED
Sbjct: 601 EEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKNNVHAFNAED 656
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 222/467 (47%), Gaps = 17/467 (3%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +K +D + ++ YAKC L+ A+++FD+MP RD SWNA+I FA G L
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L MR D T + + + L L + +HS + +G+ +V +
Sbjct: 76 DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSAL 135
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC + +VF+ + E R VSWN+++ + D + M +G
Sbjct: 136 LDMYAKCGRVDDGYVVFQSMPE--RNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEI 193
Query: 257 D---VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D V+ +++LL + + + +Q +H + +G +L +V N I+ YS+C + A
Sbjct: 194 DDGTVSPLLTLLDNAMFYKLTMQ---LHCKIVKHGLELFNTVCNATITAYSECCSLQDAE 250
Query: 314 FLFDG--MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+FDG +C R V+W +M+ Y D A ++F M+ G PD T ++ C
Sbjct: 251 RVFDGAVLC-RDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSV 309
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS--IGDARELFYALPEKTVVSWT 429
GK GL ++V V NALI MY + + DA +F+++ K +W
Sbjct: 310 QEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWN 369
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+++AG G +AL LF QM L + + TF AV+++C+ L+ G + L KV
Sbjct: 370 SILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKV 429
Query: 490 -YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ N + S + + + G +++A ++ K +A +W +++
Sbjct: 430 GFDTNSYVG--SSLIFMYSKCGIIEDARKSFEATS-KDNAIVWNSII 473
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 138/307 (44%), Gaps = 3/307 (0%)
Query: 166 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
+H+ L L + H I +G AD N I++YAKC +L A VF E R VS
Sbjct: 4 LHSLTLLGLIATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFD--EMPHRDTVS 61
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
WN+II D + M D T S+L L G+ +HS +
Sbjct: 62 WNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVML 121
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
G +V + L+ MY+KCG +D +F M +R VSW +++ Y++ GD D A
Sbjct: 122 KVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFW 181
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
+ ME G D TV +++ + +L GL+ VCNA I YS
Sbjct: 182 VLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYS 241
Query: 406 KCGSIGDARELF-YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+C S+ DA +F A+ + +V+W +M+ ++ + A +F M P+ T+
Sbjct: 242 ECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYT 301
Query: 465 AVLQACT 471
++ AC+
Sbjct: 302 GIVGACS 308
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/576 (32%), Positives = 300/576 (52%), Gaps = 39/576 (6%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDM---YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
H +VK+ + + + ++++ D L A +F+ + ++ WN M+ G A
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD------ 187
L L ++ M G + T L ++ +K + +H+ + +G +
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 188 -------------------------ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
DV C I+ YA D++ A VF I E R
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITE--RD 179
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VVSWN++I G ++++L ++ M+ RPD T+VS+LS+C ++ GR +H+
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239
Query: 283 H-GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
H+GF + ++N I +YSKCGD++ A LF+G+ + VSW +I GY
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK 299
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNA 399
EAL LF M +GE P+ VT+LS++ C GA+++G+W Y G+ + + +
Sbjct: 300 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTS 359
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY+KCG I A ++F ++ K++ SW MI G A++G A DLF +M + + P+
Sbjct: 360 LIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPD 419
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+T + +L AC+H+G L+ G F +T+ Y + P+L HY CM DLLG G KEA + +
Sbjct: 420 DITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEII 479
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
MP++ D IW +LL ACK+H N+E+ E A +L E+EP ++ YV ++NIYA GRW+
Sbjct: 480 HMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWE 539
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA +R ++ +KK PG S + I+ F + D
Sbjct: 540 DVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGD 575
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/474 (28%), Positives = 234/474 (49%), Gaps = 46/474 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ +R ++ L ++ RM PN TFPF+ K+CAK F + IH ++
Sbjct: 51 WNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM 110
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLD-------------------------------CAYK 110
K D + T+++ MYA+ RL+ A K
Sbjct: 111 KLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARK 170
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD + +RDV SWNAMI G+ + E+ L LF M ++ D T++ + A +
Sbjct: 171 VFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGS 230
Query: 171 LSLLKSVHSF-GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ L + +H+ H G + + + N +I Y+KC D+++A +F G+ + VVSWN++
Sbjct: 231 IELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGL--SCKDVVSWNTL 288
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH------ 283
IGG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H +
Sbjct: 289 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK 348
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
G+ G L S LI MY+KCGDI++A +F+ M ++ SW AMI G+A G + A
Sbjct: 349 GVTNGSALRTS----LIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAA 404
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALID 402
LF M G PD +T++ ++S C SG L+LG+ F + + + +ID
Sbjct: 405 FDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMID 464
Query: 403 MYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G +A E+ + +P E V W +++ C ++G A ++ME++
Sbjct: 465 LLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIE 518
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 307/602 (50%), Gaps = 11/602 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA-KACAKLSDFLYS 73
+ + W S I A++LFR+M + + P+ +TF I K + +
Sbjct: 77 KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEG 136
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H HI+++ + D V +V+MY KC ++ A +FD + D +V SW +I +AQ
Sbjct: 137 KRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQN 196
Query: 134 GFLEKVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDAD 189
G +VL L M G++ D F TV+G A L K +H+ I G+D D
Sbjct: 197 GHCMEVLRLLSRMNQAGVKPDGYTFTTVLG---ACTAVGALEEAKILHAATISSTGLDRD 253
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+V I+ Y KC L+ A VF I+ + +VSW+S+I + ++ M
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDN--KDIVSWSSMIAAFAQSGQAKSAIQLLMLM 311
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+G RP+ T V++L + +A G+ +H+ + G+ DV + + L+ MY G +
Sbjct: 312 DLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWV 371
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
++AR +F+ +R VSW++MI+GY+Q AL LF ME G P+ VT +S I C
Sbjct: 372 ETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDAC 431
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
GAL G GL +V V AL+++Y KCG + +A +F + +K +++WT
Sbjct: 432 AGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWT 491
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
++ NG +L L H M ++P+ + F+A+L +C +AG + KG Y+NLMT+
Sbjct: 492 SIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQD 551
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P + H CM D+LGR GKL+ A + +M +S W LL ACK H +
Sbjct: 552 FGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLLTACKAHNDTARAAR 610
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A ++F+LEP +A PYV +++++ G W+ R M V++ G+S + I +
Sbjct: 611 AAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVH 670
Query: 610 TF 611
F
Sbjct: 671 EF 672
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 234/478 (48%), Gaps = 10/478 (2%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSD-----IFVQTTMVDMY 99
M+ +I+ I AC+ L + +HG +++ D ++ ++ MY
Sbjct: 1 MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
+C D A +FD+M D++V +W ++I F G + LF M L G+ D +T
Sbjct: 61 LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120
Query: 160 G-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
L + + ++L K VHS + G + D V N + Y KC D++ A VF I++
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
V SW II + L M G +PD T ++L +C AL + +
Sbjct: 181 --PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAK 238
Query: 279 LVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
++H+ I G D D +V LI++Y KCG ++ A +F + ++ VSW++MI+ +AQ
Sbjct: 239 ILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQS 298
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G A++L M+ G P+ VT ++++ A + GK G D+V +
Sbjct: 299 GQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLT 358
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+AL+ MY G + AR +F + E+ VVSW++MIAG + N AL LF +M ++
Sbjct: 359 SALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQ 418
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
PN VTF++ + AC G L +G + + ++ ++ + + +L G+ G+L+EA
Sbjct: 419 PNSVTFVSAIDACAGVGALRRG-TQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEA 475
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 141/274 (51%), Gaps = 7/274 (2%)
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF----DLDVSVI-NTLISMYSKCGD 308
+ +++ ++L++C AL +G+ VH + D S++ N +I MY +CG
Sbjct: 6 IQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGC 65
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS-MIS 367
D A +FD M D+ V+WT++IS + G +A+ LF M +G PD +T S ++
Sbjct: 66 TDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLK 125
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
G+ L+ GK ++ G + + MV N +++MY KCG + A +F ++ + V S
Sbjct: 126 WSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFS 185
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT +IA A NG +E L L +M + ++P+ TF VL ACT G LE+
Sbjct: 186 WTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATI 245
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALD-FVQ 520
++ + + + +L G+ G L+EA FVQ
Sbjct: 246 SSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQ 279
>gi|354805159|gb|AER41579.1| CRR4 [Oryza brachyantha]
Length = 626
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 291/582 (50%), Gaps = 83/582 (14%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL + M + PN TF F+ +ACA L + +HG IV+ F S++FVQ T++D
Sbjct: 89 ALAAYTAMLAAGVPPNGFTFTFLLRACALLGFPRPCRCVHGQIVRWGFGSEVFVQNTLLD 148
Query: 98 MYAKCD---RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
+Y +C R+ A ++FD+M DRDV SWN++I + G D
Sbjct: 149 VYYRCGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMSSG-------------------D 189
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+ M L +A + +V NT ++ +A+ D+ A+ VF
Sbjct: 190 YTGAMELFEAM--------------------PERNVVSWNTLVAGFARVGDMVTAQTVFD 229
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ R +SWN +I G + + + + M
Sbjct: 230 RMPS--RNAISWNLMISGYASSGDVEAARSMFDRMDQKK--------------------- 266
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
DV ++S Y+K GD+D+A+ LFD M + VSW AMI+GY
Sbjct: 267 -----------------DVVSWTAMVSAYAKIGDLDTAKELFDHMPLKNLVSWNAMITGY 309
Query: 335 AQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
EALR F M G PD T++S++S C Q G++E W ++ +
Sbjct: 310 NHNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIRKSNVHLT 369
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ + NALIDM++KCG +G A+ +FY + + +++WTTMI+G A NG EAL +++ M
Sbjct: 370 IALGNALIDMFAKCGDVGRAQSIFYEMKTRCIITWTTMISGFAFNGLCREALLVYNNMCR 429
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
+ + + F+A L AC H G L++GW FN M + Y + P + HY C+ DLLGR G L+
Sbjct: 430 EGVELDDMVFIAALAACVHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQ 489
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYA 573
EA+ F++SMP++ IW TLL +C H N E +YV+ ++ ELEP +++ V ++N A
Sbjct: 490 EAVLFIESMPLEPSVVIWATLLSSCVAHGNAEFIDYVSKKITELEPFNSSYQVLVSNSSA 549
Query: 574 LGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L GRWDGV RT+M+ ++K PG S + + + F +D
Sbjct: 550 LEGRWDGVIGARTIMRNWGIEKVPGSSSIQVGSEVHEFLAKD 591
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I + +AL F+ M + P+ T + ACA+L Y I I
Sbjct: 302 WNAMITGYNHNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFI 361
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
KS I + ++DM+AKC + A +F +M R + +W MI GFA G + L
Sbjct: 362 RKSNVHLTIALGNALIDMFAKCGDVGRAQSIFYEMKTRCIITWTTMISGFAFNGLCREAL 421
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIH 167
++ NM G++ D + + A +H
Sbjct: 422 LVYNNMCREGVELDDMVFIAALAACVH 448
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 300/561 (53%), Gaps = 6/561 (1%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
T + C+K +H ++K+ SD+F+ +++MYAKC A ++FD+M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
++++ SW+AMI G+ Q G + + L+ M LV + F +V+ A ++L +
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVI---SACASLSAVTLGQ 121
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+HS + G ++ V N+ IS Y KCN A VF E VS+N++I G
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPE--PNCVSYNALITGFVE 179
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+ + L F++ M G PD + +L C E L +G +H + D +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
N +I+MYS+ I A F + ++ +SW +I+ + D + LR+F M
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299
Query: 356 V-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
V PD T S ++ C ++ GK + L ++ V NAL++MY+KCG IG A
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F + +VSW T+IAG +G A++LF QM +RP+ VTF+ +L AC HAG
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
++KG YFN M + Y + P++ H+SC+ D+LGR G+L EA ++++ P +D + +L
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSL 479
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L A ++H ++ IGE +A L +L+P + +PYV ++N+YA G WD VA R +K + +K
Sbjct: 480 LSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLK 539
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K PG SL+ +NG FT+ D
Sbjct: 540 KEPGHSLIEVNGSVEKFTIGD 560
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 213/424 (50%), Gaps = 8/424 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I E A+ L+ +M + PN F + ACA LS Q IH +
Sbjct: 72 WSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSL 128
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + S FV +++ MY KC++ A +F P+ + S+NA+I GF + LE+ L
Sbjct: 129 KFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLE 188
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F MR G+ D MG+ ++L +H + + +D+ + N I+ Y+
Sbjct: 189 FFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYS 248
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GFRPDVTT 260
+ N ++ AE FR IEE + V+SWN++I C++ D L ++HM + RPD T
Sbjct: 249 ELNLIQEAEKAFRLIEE--KDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFT 306
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S L++C ++ G+ +H+H + D+ V N L++MY+KCG I A +F M
Sbjct: 307 FTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMV 366
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK- 379
VSW +I+G+ G + A+ LF M A+G PD VT + +++ C +G ++ G+
Sbjct: 367 HHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQL 426
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALN 438
+F++ + G+ ++ + LIDM + G + +A E P V ++++ L+
Sbjct: 427 YFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLH 486
Query: 439 GEFV 442
G+ V
Sbjct: 487 GDVV 490
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 1/158 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDF 70
++ + WN+ I ++ K L +F+ M ++ ++ P++ TF ACA L+
Sbjct: 261 RLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASM 320
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ + IH H++++ + D+ V +V+MYAKC + AY +F KM ++ SWN +I GF
Sbjct: 321 SHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGF 380
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G E+ + LF M GI+ D VT +GL A HA
Sbjct: 381 GNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHA 418
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 292/571 (51%), Gaps = 29/571 (5%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA-SWNAMIVGFA 131
++ +H I+++ S + +T++ +Y+ + L + +F+ +P +W ++I +
Sbjct: 24 AKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G L F M G D + ++ K L +SVH I +G+ D+
Sbjct: 83 SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGL---------------------------RTVV 224
CN ++ Y+K L+ + +EG R +V
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIV 202
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SWN++I G +D+L R M RPD T+ S+L L++G+ +H +
Sbjct: 203 SWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 262
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
I G+D DV + ++LI MY+KC +D + +F + +SW ++I+G Q G DE L
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
+ F M A P+ V+ S++ C L LGK Y NV + +AL+DMY
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 382
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCG+I AR +F + +VSWT MI G AL+G +A+ LF +M ++PN V F+
Sbjct: 383 AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFM 442
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
AVL AC+HAG +++ W YFN MT+ Y++ P L HY+ +ADLLGR G+L+EA +F+ M I
Sbjct: 443 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 502
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ +W TLL AC++H+NIE+ E V+ +LF ++P + YV ++NIY+ GRW L
Sbjct: 503 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL 562
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R M+ +KK P S + I K F D
Sbjct: 563 RIAMRDKGMKKKPACSWIEIKNKVHAFVAGD 593
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 232/479 (48%), Gaps = 37/479 (7%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N + T W S IR +L F +M + P++ FP + K+C + D
Sbjct: 62 FNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKD 121
Query: 70 FLYSQMIHGHIVK-----------------SPFWS--------DIFVQTTMVDMYAKCDR 104
+ + +HG I++ S FWS +F + D+Y+K ++
Sbjct: 122 LRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEK 181
Query: 105 ----LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
L K+F+ MP RD+ SWN +I G AQ G E L + M ++ D T+
Sbjct: 182 ESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSS 241
Query: 161 LTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ I A++++LL K +H + I G DADV + ++ I YAKC + + VF + +
Sbjct: 242 VL--PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQ 299
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
+SWNSII GC FD+ L F++ M+ +P+ + S++ +C L G+
Sbjct: 300 --HDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H + I FD +V + + L+ MY+KCG+I +AR++FD M VSWTAMI GYA G
Sbjct: 358 QLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG 417
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVC 397
+A+ LF ME G P+ V +++++ C +G + E K+F++ + +
Sbjct: 418 HAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHY 477
Query: 398 NALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
A+ D+ + G + +A E + E T W+T++A C ++ A + ++ +D
Sbjct: 478 AAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVD 536
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 162/348 (46%), Gaps = 31/348 (8%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L Q K S K +H+ + + + S+ +T +S Y+ N L + L+F +
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSP- 68
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
T ++W SII T F SL+F+ M+ G PD S+L SC + L G V
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDID-----------------------------S 311
H I G D+ N L++MYSK ++ S
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
R +F+ M R VSW +ISG AQ G ++AL + M A PD T+ S++ +
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
L GK YA G +V + ++LIDMY+KC + D+ +FY LP+ +SW ++
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
IAGC NG F E L F QM+ ++PN V+F +++ AC H L G
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLG 356
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/594 (31%), Positives = 321/594 (54%), Gaps = 14/594 (2%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ T + ++QI+ + K H+ L LF + + P + KA + +
Sbjct: 13 APTCSSPSNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQ 72
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H +K+ S+ V +++ MY K + A ++FD MP RD +WN++I G+ G+
Sbjct: 73 LHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGY 132
Query: 136 LEKVLCLFYNMRLVGI------QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
LE+ L ++ L+G+ A V++ G + + + L V+ IG
Sbjct: 133 LEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNE---RIGQSMF 189
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+S + Y +C D MA VF G+E ++ VVSW ++I GC +D++ +R M
Sbjct: 190 LST--ALVDFYFRCGDSLMALRVFDGME--VKNVVSWTTMISGCIAHQDYDEAFACFRAM 245
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD- 308
+G P+ T ++LLS+C P + G+ +H + +GF+ S + L++MY +CG+
Sbjct: 246 QAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEP 305
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ A +F+G R V W+++I ++++GD +AL+LF M P+ VT+L++IS
Sbjct: 306 MHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISA 365
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C +L+ G Y G ++ V NALI+MY+KCG + +R++F +P + V+W
Sbjct: 366 CTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTW 425
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+++I+ L+G +AL +F++M E ++P+ +TFLAVL AC HAG + +G F +
Sbjct: 426 SSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRA 485
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
++ + HY+C+ DLLGR GKL+ AL+ ++MP+K A IW +L+ ACK+H ++I E
Sbjct: 486 DCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAE 545
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+A +L EP++A Y + IYA G W +R MK ++KK G S +
Sbjct: 546 MLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFSRI 599
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 309/589 (52%), Gaps = 43/589 (7%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHI--VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD 113
T+ + K+C +S + I HI V D + M + + A ++F+
Sbjct: 10 TYISLLKSCKSMSQL---KQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFN 66
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
+ D + +N MI F + G + LF +R G+ D T + + +
Sbjct: 67 YIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVRE 126
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ VH+F + G++ D VCN+++ YA+ ++ VF + + R VSWN +I G
Sbjct: 127 GEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPD--RDAVSWNIMISGY 184
Query: 234 TYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
+F+++++ YR M + +P+ TVVS LS+C L G+ +H + I DL
Sbjct: 185 VRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IASELDLT 243
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMC--------------------DRTR-------- 324
+ N L+ MY KCG + AR +FD M D+ R
Sbjct: 244 TIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPS 303
Query: 325 ---VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V WTAMI+GY Q +E + LF M+ G PD V+++++GC QSGALE GKW
Sbjct: 304 RDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWI 363
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
NY +K + +V ALI+MY+KCG I + E+F L EK SWT++I G A+NG+
Sbjct: 364 HNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKP 423
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL+LF M L+P+ +TF+AVL AC+HAG +E+G F+ M+ +Y + P L HY C
Sbjct: 424 SEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGC 483
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGI---WGTLLCACKIHRNIEIGEYVAYRLFELE 558
DLLGR G L+EA + V+ +P +++ I +G LL AC+ + NI++GE +A L +++
Sbjct: 484 FIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVK 543
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
++ + +A+IYA RW+ V +R MK +KK PG S + ++GK
Sbjct: 544 SSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVDGK 592
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 218/453 (48%), Gaps = 36/453 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N I+ V A+ LF++++++ + P+N T+P++ K + + + +H +V
Sbjct: 76 YNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVV 135
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ D +V + +DMYA+ ++ ++F++MPDRD SWN MI G+ + E+ +
Sbjct: 136 KTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVD 195
Query: 142 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ M + + TV+ A ++L L K +H + I +D + N + Y
Sbjct: 196 VYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IASELDLTTIMGNALLDMY 254
Query: 201 AKCNDLKMAELVFRGI-----------------------------EEGLRTVVSWNSIIG 231
KC + +A +F + R +V W ++I
Sbjct: 255 CKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMIN 314
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G ++F++++ + M G +PD VV+LL+ C AL QG+ +H++ +
Sbjct: 315 GYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKV 374
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
D V LI MY+KCG I+ + +F+G+ ++ SWT++I G A G EAL LF AM+
Sbjct: 375 DAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQ 434
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
G PD +T ++++S C +G +E G K F + + ++ N+ ID+ + G +
Sbjct: 435 TCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLL 494
Query: 411 GDARELFYALP----EKTVVSWTTMIAGCALNG 439
+A EL LP E V + +++ C G
Sbjct: 495 QEAEELVKKLPAQNNEIIVPLYGALLSACRTYG 527
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S I W + I V N + + LF M+ ++P+ + CA+ +
Sbjct: 303 SRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKW 362
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +I ++ D V T +++MYAKC ++ ++++F+ + ++D SW ++I G A G
Sbjct: 363 IHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGK 422
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV-HSFGIHIGVDADVSVCN 194
+ L LF M+ G++ D +T + + A HA + + + HS ++ ++
Sbjct: 423 PSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYG 482
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVS--WNSIIGGC-TYGD 237
+I + L+ AE + + + ++ + +++ C TYG+
Sbjct: 483 CFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGN 528
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/494 (34%), Positives = 266/494 (53%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
SWN + A + + L+ +M G D + + ++ + +H
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
I G +A+ V IS Y KC ++ A VF + V +N++I G T K D
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ +R M G D T++ L+ C PE L GR +H + G +V+V+N+ I+
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY KCG ++S R LFD M + ++W A+ISGY+Q G + L LF M+++G PD T
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++S++S C GA ++G+ + G NV + NALI MY++CG++ AR +F +P
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMP 316
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
K++VSWT MI ++G L LF M++ +RP+ F+ VL AC+H+G +KG
Sbjct: 317 VKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 376
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
F M + Y++ P HYSC+ DLLGR G+L EA++F+ SMP++ D +WG LL ACKIH
Sbjct: 377 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIH 436
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+N+++ E ++ E EP + YV M+NIY+ +G+ +R MM+ +K PG S
Sbjct: 437 KNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 496
Query: 602 VHINGKTCTFTVED 615
V GK F D
Sbjct: 497 VEHKGKVHLFLAGD 510
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 226/447 (50%), Gaps = 8/447 (1%)
Query: 15 RSSTI--NQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
R+S + WN ++RE ++ +++ L+R M ++ P+ +FPFI K+CA LS +
Sbjct: 9 RNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVS 68
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV--ASWNAMIVGF 130
Q +H H+++ ++ FV T ++ MY KC ++ A K+F++ P +NA+I G+
Sbjct: 69 GQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGY 128
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ +F M+ G+ D VT++GL ++L L +S+H + G ++V
Sbjct: 129 TANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEV 188
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+V N++I+ Y KC ++ +F E ++ +++WN++I G + D L + M
Sbjct: 189 AVLNSFITMYMKCGSVESGRRLFD--EMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK 246
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G PD T+VS+LSSC A G+ V GF +V + N LISMY++CG++
Sbjct: 247 SSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLA 306
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR +FD M ++ VSWTAMI Y G + L LF M G PD + ++S C
Sbjct: 307 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACS 366
Query: 371 QSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSW 428
SG + G + F L+ + L+D+ + G + +A E ++P E W
Sbjct: 367 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVW 426
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELD 455
++ C ++ A F +++E +
Sbjct: 427 GALLGACKIHKNVDMAELAFAKVIEFE 453
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 307/557 (55%), Gaps = 5/557 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I E +A+LL++ M + +P+ +TF + +++H
Sbjct: 267 IIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHS 326
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
HIV+S +I + T +V MY+KC+ L+ LF+KMP R+V SWN M+ +A+ G K
Sbjct: 327 HIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRK 386
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ + M+L G++ D VT +GL + L L + VH + +AD+ + N+ ++
Sbjct: 387 AVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLN 446
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y +C +++ AE+VF GI + R V+SW +++ + ++ D +L + + G +P
Sbjct: 447 MYGRCGEVEQAEMVFDGILQ--RNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTC 504
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T + L +CV EAL +GRLVHS + G D DVS+ + L++MY +CG I A+ FD
Sbjct: 505 ITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDD 564
Query: 319 M-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ V+W+AMI+ + Q G E L+ M+ G T S +S C L
Sbjct: 565 TEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLRE 624
Query: 378 GKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK +Y + V N+L+ MY KCGS+ ARE+F + ++ W +I+G A
Sbjct: 625 GKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAIISGYA 684
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G+ +A++LFH+M + + P+ VTF+ +L C+H G L++G + M ++ + P
Sbjct: 685 QHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASMVEL-GLEPTQ 743
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
++Y+C+ DLLGR GKL+EA +F+QS+ + +LL +CK H +++ G A + E
Sbjct: 744 DNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIME 803
Query: 557 LEPHSAAPYVEMANIYA 573
++P S++ +V +++IY+
Sbjct: 804 MDPRSSSAHVVLSSIYS 820
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 262/500 (52%), Gaps = 4/500 (0%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
A++L R+M ++P+N+T +C ++IHG I +S D+ ++ +V
Sbjct: 85 AIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVS 144
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY C +D A ++FD MP R+V +W AMI A+ LE+ +F M L G +++FVT
Sbjct: 145 MYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETS-LEQAFKVFRLMELEGFKSNFVT 203
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ L QA + L + +H + + +CN I+ Y +C L+ A +F +
Sbjct: 204 YVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMV 263
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E R +++WN++I ++++ Y+ M+ +G +PD T V+LL+ PEAL
Sbjct: 264 E--RDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDV 321
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+LVHSH + G +++++ L++MYSKC ++ R+LF+ M R +SW M++ YA+
Sbjct: 322 KLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKH 381
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G +A+++ M+ G PD VT + +++ C S L+LG+ + G + ++++
Sbjct: 382 GLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILW 441
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
N+L++MY +CG + A +F + ++ V+SWT M+ + AL LFH + ++
Sbjct: 442 NSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVK 501
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
P +TFL L AC A L KG + + + +++ S + + GR G +++A
Sbjct: 502 PTCITFLEALDACVGAEALGKGRLVHSCAVQSGN-DTDVSLGSALVAMYGRCGSIRDAKA 560
Query: 518 FVQSMPIKSDAGIWGTLLCA 537
++ + W ++ A
Sbjct: 561 CFDDTEVRKNHVTWSAMIAA 580
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 229/446 (51%), Gaps = 7/446 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A +FR M+ + N +T+ + +AC+K ++H V+S + + ++
Sbjct: 184 QAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALI 243
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY +C RL+ A +F M +RD+ +WNA+I + Q G +E+ + L+ M G + D V
Sbjct: 244 TMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKV 303
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + L + + L+ +K VHS + GV ++++ ++ Y+KC L+ +F +
Sbjct: 304 TFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKM 363
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ R V+SWN ++ ++ +M DG +PD T V LL+ C L
Sbjct: 364 PQ--RNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKL 421
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR VH + D+ + N+L++MY +CG+++ A +FDG+ R +SWTAM++ Y++
Sbjct: 422 GRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSR 481
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+ D AL LF A+ +G P +T L + C + AL G+ + A G +V +
Sbjct: 482 QNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSL 541
Query: 397 CNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALD--LFHQMME 453
+AL+ MY +CGSI DA+ F K V+W+ MIA +G+ E L F Q
Sbjct: 542 GSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQG 601
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKG 479
LD+ P TF + L AC++ L +G
Sbjct: 602 LDMSP--ATFASTLSACSNLADLREG 625
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 232/454 (51%), Gaps = 4/454 (0%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+AC KL ++ +H IV++ + +F+ ++ Y KC LD A++ F++M ++V
Sbjct: 8 QACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVY 67
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
+W A+I A + L M L G++ D +T++ + ++ L K +H
Sbjct: 68 TWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHGLI 127
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
G D+ + N +S Y C + A+ VF + R V++W ++IG +
Sbjct: 128 AQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPA--RNVITWTAMIGAHAE-TSLEQ 184
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ +R M +GF+ + T V+L+ +C PE L G ++H + ++ + N LI+
Sbjct: 185 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 244
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY +CG ++ AR +F M +R ++W A+I+ Y Q G ++EA+ L+ M G PD VT
Sbjct: 245 MYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVT 304
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++++ AL K ++ G+ N+ + AL+ MYSKC S+ D R LF +P
Sbjct: 305 FVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMP 364
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ V+SW M+ A +G +A+ + M ++P+ VT + +L CT + L+ G
Sbjct: 365 QRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRK 424
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ + + +L ++ + ++ GR G++++A
Sbjct: 425 VHGWIAE-GRCEADLILWNSLLNMYGRCGEVEQA 457
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 166/312 (53%), Gaps = 3/312 (0%)
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
V + L QA K L + + +HS + +D V + N I Y KC+ L A F
Sbjct: 1 VEYVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFER 60
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+ + V +W +IIG C + ++ R M+ +G +PD T+++ L+SC +AL
Sbjct: 61 M--SYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALP 118
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G+L+H G D+ + N L+SMY CG +D A+ +FD M R ++WTAMI +A
Sbjct: 119 AGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHA 178
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+ L++A ++F ME G + VT ++++ C + LE+G +
Sbjct: 179 ET-SLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETP 237
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+CNALI MY +CG + DAR +F ++ E+ +++W +I +G EA+ L+ M++
Sbjct: 238 LCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEG 297
Query: 456 LRPNRVTFLAVL 467
+P++VTF+A+L
Sbjct: 298 CKPDKVTFVALL 309
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 143/287 (49%), Gaps = 9/287 (3%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V LL +C +AL R +HS + D V + N LI Y KC +D A F+ M
Sbjct: 4 VRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSY 63
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ +WTA+I A A+ L M G PD +T+L+ ++ C S AL GK
Sbjct: 64 KNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLI 123
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G + ++++ NAL+ MY CGS+ DA+ +F A+P + V++WT MI G
Sbjct: 124 HGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMI-GAHAETSL 182
Query: 442 VEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+A +F ++MEL+ + N VT++ ++QAC+ FLE G L + + + +
Sbjct: 183 EQAFKVF-RLMELEGFKSNFVTYVTLVQACSKPEFLEVG---IILHMRSVESSSAMETPL 238
Query: 501 CMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
C A + GR G+L++A SM ++ D W L+ H ++E
Sbjct: 239 CNALITMYGRCGRLEDARAIFSSM-VERDIIAWNALITEYGQHGHVE 284
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
V + ++ C + AL++ + + L + V + N LI Y KC S+ DA E F
Sbjct: 1 VEYVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFER 60
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ K V +WT +I CA + A+ L QM+ ++P+ +T LA L +C + L G
Sbjct: 61 MSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAG 120
Query: 480 WGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
L+ + +Q + L + + + G G + +A +MP + + W ++ A
Sbjct: 121 KLIHGLIAQSGHQCDLILE--NALVSMYGSCGSVDDAKRVFDAMPAR-NVITWTAMIGA- 176
Query: 539 KIHRNIEIGE-YVAYRLFELE 558
H + + + +RL ELE
Sbjct: 177 --HAETSLEQAFKVFRLMELE 195
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 204/596 (34%), Positives = 316/596 (53%), Gaps = 25/596 (4%)
Query: 19 INQWN---SQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
I WN S E+VD AL R M I + +T+ C FL+
Sbjct: 143 IVSWNTVLSGFEESVD------ALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQ 196
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG- 134
+H +VK ++F+ +V MY++ LD A ++FD+MP+RD+ SWNAMI G+AQ G
Sbjct: 197 LHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGK 256
Query: 135 --FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
LE VL LF NM G+ D V++ G A H K+L L + +H +G VSV
Sbjct: 257 CYGLEAVL-LFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSV 315
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
CN +S Y+KC K A+ VF I R VVSW ++I +D+++ + M +
Sbjct: 316 CNVLMSTYSKCEVPKDAKAVFESISN--RNVVSWTTMIS-----IDEEDAVSLFNAMRVN 368
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G P+ T + L+ + + +G +H I F + +V N+ I+MY+K I +
Sbjct: 369 GVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQES 428
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQ 371
+F+ + R VSW A+ISGYAQ G EAL + + A E+ P+ T S+++
Sbjct: 429 TKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLS--AVKEIKPNQYTFGSVLNAIAA 486
Query: 372 SGALEL--GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ + L GK ++ GL + +V AL+DMY K G I +++ +F E+T +WT
Sbjct: 487 AEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWT 546
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I+ A +G+F + L+ +M + P+ +TFL+VL AC G ++ G F+ M K
Sbjct: 547 AIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKK 606
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P HYS M D+LGR G+L EA + + +P + +LL +C++H N+E+ E
Sbjct: 607 HSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHGNMEMAEK 666
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
V RL E++P S+ PYV MAN+YA G+W+ VA +R M+ VKK G S V ++
Sbjct: 667 VVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEVGFSWVDVS 722
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 225/499 (45%), Gaps = 23/499 (4%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+ +T KAC S IHG V S F S + V +++ MY K A +F
Sbjct: 78 DEVTVALSLKACQGESKL--GCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVF 135
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
+ + D+ SWN ++ GF + L +M GI D VT A H
Sbjct: 136 ENLSHPDIVSWNTVLSGFEES---VDALNFARSMHYCGIAFDPVTYTS-ALAFCWGDHGF 191
Query: 173 LLK-SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
L +HS + G+ +V + N ++ Y++ L A VF + E R +VSWN++I
Sbjct: 192 LFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPE--RDLVSWNAMIS 249
Query: 232 GCTYGDKFD--DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
G K +++ + +M+ G D ++ +S+C + L GR +H G+
Sbjct: 250 GYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGY 309
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
VSV N L+S YSKC A+ +F+ + +R VSWT MIS D ++A+ LF A
Sbjct: 310 GTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMIS-----IDEEDAVSLFNA 364
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M G P+ VT + +I + G V N+ I MY+K
Sbjct: 365 MRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFEC 424
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
I ++ ++F L + VSW +I+G A NG + EAL + ++ +++PN+ TF +VL A
Sbjct: 425 IQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVK-EIKPNQYTFGSVLNA 483
Query: 470 CTHAGFLEKGWG---YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
A + G + +L+ +P ++ + D+ G++G + E+ V + ++
Sbjct: 484 IAAAEDISLNHGKSCHSHLLKLGLGTDPIVS--GALLDMYGKRGDIIES-QRVFNETLER 540
Query: 527 DAGIWGTLLCACKIHRNIE 545
W ++ A H + E
Sbjct: 541 TQFAWTAIISAYARHGDFE 559
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 300/541 (55%), Gaps = 4/541 (0%)
Query: 76 IHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH I+ + F++D ++ Y + + + A +F+KMP R + +WN+MI+ +++
Sbjct: 4 IHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTN 63
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ ++VL L+Y M GI+ D T +A L + + + + + G DV V +
Sbjct: 64 YPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVS 123
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ ++ YAK + A++VF + + R VVSW ++I G + D+++ YR M +
Sbjct: 124 SVLNLYAKSGKMDKAKIVFDKMVK--RDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERT 181
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
D +V L+ +C G VH H + ++D + +LI MY+K G ++ A
Sbjct: 182 EGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASR 241
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+G+ ++ +SW A+ISG+AQ G ++ L M+ +G PDLV+++S +S C Q G
Sbjct: 242 VFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGN 301
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L++GK + D V ALIDMY+KCG++ AR LF + + ++ W MI+
Sbjct: 302 LKVGKSLHGHIVKRLYLDKV-SGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISS 360
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
++G+ +EAL LF +M E ++ P+ TF ++L AC+H+G +E+G +F+++ ++ P
Sbjct: 361 YGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQP 420
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
HY+CM DLL R G+++EA ++SM IK IW LL C H+N+ IGE VA ++
Sbjct: 421 SEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKI 480
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
E P YV ++N +++ +WD A R +MK ++K PG S V +NG F +E
Sbjct: 481 LESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGDLQAFLME 540
Query: 615 D 615
D
Sbjct: 541 D 541
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 213/420 (50%), Gaps = 5/420 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+IN WNS I N + L L+ RM I+P++ TF KAC+ L D ++I
Sbjct: 48 SINAWNSMIIAYSRTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIW 107
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
V + D+FV ++++++YAK ++D A +FDKM RDV SW MI GFAQ G
Sbjct: 108 NQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPL 167
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ ++ M+ + D V ++GL QA SVH + ++ D + + I
Sbjct: 168 DAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLI 227
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAK L++A VF GI ++V+SW ++I G + +L M GF+PD
Sbjct: 228 DMYAKNGKLELASRVFEGIP--YKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPD 285
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ +++S LS+C L G+ +H H + + LD LI MY+KCG + AR LFD
Sbjct: 286 LVSLISSLSACAQVGNLKVGKSLHGHIVKRLY-LDKVSGTALIDMYAKCGALTFARALFD 344
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R + W AMIS Y GD EAL LF M+ PD T S++S C SG +E
Sbjct: 345 QIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEE 404
Query: 378 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
G+ WF ++ + ++D+ S+ G + +A +L ++ K ++ W +++GC
Sbjct: 405 GQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGC 464
>gi|359474850|ref|XP_002277741.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
gi|297744624|emb|CBI37886.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 305/570 (53%), Gaps = 4/570 (0%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
K++ LF +M+ + + P + T + + A L D + Q +HG I+K SD V T +
Sbjct: 74 RKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTAL 133
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
++ YAKC + +Y++F+++ + + S +A++ GF E+ + LF R +G+ +
Sbjct: 134 LNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNA 193
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
TV+ L +A + + L +S+H + + + DV+V N+ + Y+ DL A VF G
Sbjct: 194 ATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEG 253
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+E R V+SW ++I + D+L +R M G DV V++L+S+C L
Sbjct: 254 ME--CRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLK 311
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
+GR +H+ I GF ++ + N++I+MYSKCGD+DS+R +FD ++ VSWTAMI G
Sbjct: 312 RGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCV 371
Query: 336 QKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G EAL+L M D + ++ ++S G+ LEL + YA G
Sbjct: 372 QNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYR 431
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+V N+LI YSKCG + A +F + + +VSW ++ G +NG A+ L+H+M +
Sbjct: 432 LVQNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRK 491
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
P+ T+L VL AC+H+G ++ G FN M + + P +H C+ DLL R G
Sbjct: 492 GRENPDAATYLCVLSACSHSGLVDDGLVIFNQMVEERTIRPSQDHCGCIVDLLARAGCFS 551
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYA 573
+A +FV K W LL C++H N+ + E A R+ EL+P V ++N+YA
Sbjct: 552 DAREFVSRYMEKMGPNAWRALLSGCQLHGNVGLAELAARRVCELDPEEPGQVVLLSNVYA 611
Query: 574 LGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
GR+ LR MK+ ++ K PG SL++
Sbjct: 612 SVGRFQDAEALRASMKKKELIKNPGISLLN 641
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 207/408 (50%), Gaps = 5/408 (1%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
LYS IH + P SD + ++ Y K + A KLF+++P RDV SW+ MI G+
Sbjct: 10 LYS--IHTSTQRYPHGSDPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGY 67
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ GF K + LF MR+ + T++G+ + L + VH + G+D+D
Sbjct: 68 NRNGFRRKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDF 127
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V ++AYAKC ++ + VF +E +VS ++I+ G Y + F++++ +
Sbjct: 128 RVVTALLNAYAKCGNVVDSYRVFEQLEN--PGLVSCSAIVSGFVYNELFEEAVVLFNQFR 185
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
G P+ TV++L+ +CV E+ +H + LDV+V N+++ MYS D+D
Sbjct: 186 KLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLD 245
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+A +F+GM R +SWT MI+ +AL LF M G D+V V+++IS C
Sbjct: 246 AATRVFEGMECRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACA 305
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G L+ G+ A G + + N++I MYSKCG + +R +F K++VSWT
Sbjct: 306 ILGDLKRGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTA 365
Query: 431 MIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLE 477
MI GC NG EAL L +M E + + + VL A LE
Sbjct: 366 MILGCVQNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGELALLE 413
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+S Y K D+ A +F I + R VVSW+ +I G S+ + M P
Sbjct: 33 LSCYLKSGDIINAGKLFEEIPK--RDVVSWSIMIHGYNRNGFRRKSMELFSQMRISSLVP 90
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T+V +L S V G+ VH + YG D D V+ L++ Y+KCG++ + +F
Sbjct: 91 TSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDSYRVF 150
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + + VS +A++SG+ +EA+ LF G VP+ TVL++I C +
Sbjct: 151 EQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRACVALESRR 210
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
L + L +V V N+++DMYS + A +F + + V+SWTTMI
Sbjct: 211 LCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMINLLV 270
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+AL LF QM + + V + ++ AC G L++G
Sbjct: 271 CLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRG 313
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 6/241 (2%)
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
P A++Q +H+ Y D + L+S Y K GDI +A LF+ + R VSW+ M
Sbjct: 4 PLAILQLYSIHTSTQRYPHGSDPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIM 63
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
I GY + G +++ LF M + VP T++ ++ G LG+ GL
Sbjct: 64 IHGYNRNGFRRKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGL 123
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ V AL++ Y+KCG++ D+ +F L +VS + +++G N F EA+ LF+Q
Sbjct: 124 DSDFRVVTALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQ 183
Query: 451 MMELDLRPNRVTFLAVLQACT---HAGFLEKGWGYFNLMTKVYQV---NPELNHYSCMAD 504
+L + PN T L +++AC E G ++ V V N L+ YS M D
Sbjct: 184 FRKLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLD 243
Query: 505 L 505
L
Sbjct: 244 L 244
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/602 (31%), Positives = 317/602 (52%), Gaps = 5/602 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W+S + V+ + L + R M + P+++T +A+AC K+ ++
Sbjct: 164 RVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAK 223
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG++++ D ++ +++ MY +C L A +F+ + D A W +MI Q G
Sbjct: 224 SVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNG 283
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVC 193
E+ + F M+ ++ + VT++ + L KSVH F + +D AD+ +
Sbjct: 284 CFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLG 343
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ YA C + E + I G +VVSWN++I ++++ + M+ G
Sbjct: 344 PALMDFYAACWKISSCEKLLCLI--GNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKG 401
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD ++ S +S+C ++ G+ +H H GF D V N+L+ MYSKCG +D A
Sbjct: 402 LMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGF-ADEFVQNSLMDMYSKCGFVDLAY 460
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FD + +++ V+W MI G++Q G EAL+LF M + VT LS I C SG
Sbjct: 461 TIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSG 520
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L GKW + G++ ++ + AL+DMY+KCG + A+ +F ++PEK+VVSW+ MIA
Sbjct: 521 YLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIA 580
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
++G+ A LF +M+E ++PN VTF+ +L AC HAG +E+G YFN M + Y +
Sbjct: 581 AYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSM-RDYGIV 639
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P H++ + DLL R G + A + ++S DA IWG LL C+IH +++ +
Sbjct: 640 PNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKE 699
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
L E+ + Y ++NIYA GG W +R+ M+ +KK PG S + I+ K F
Sbjct: 700 LREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGYSSIEIDDKIYRFGA 759
Query: 614 ED 615
D
Sbjct: 760 GD 761
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 269/536 (50%), Gaps = 12/536 (2%)
Query: 40 LLFRRMKKNDIEPNNLTF--PFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
L ++K N TF P + KA + + + + +HG IVK+ +D + T+++
Sbjct: 86 LYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVIGTSLLG 145
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY + L A K+FD++ RD+ SW++++ + + G + L + M G+ D VT
Sbjct: 146 MYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVT 205
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ + +A L L KSVH + I + D S+ N+ I Y +C+ L+ A+ +F +
Sbjct: 206 MLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVS 265
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ + W S+I C F+++++ ++ M + T++S+L C L +G
Sbjct: 266 D--PSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEG 323
Query: 278 RLVHSHGIHYGFD-LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
+ VH + D D+ + L+ Y+ C I S L + + + VSW +IS YA+
Sbjct: 324 KSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAR 383
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+G +EA+ LF M G +PD ++ S IS C + ++ G+ + G D V
Sbjct: 384 EGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADE-FV 442
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N+L+DMYSKCG + A +F + EK++V+W MI G + NG VEAL LF +M +
Sbjct: 443 QNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCM 502
Query: 457 RPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
N VTFL+ +QAC+++G+L KG W + L+ V V +L + + D+ + G LK A
Sbjct: 503 DINEVTFLSAIQACSNSGYLLKGKWIHHKLV--VSGVQKDLYIDTALVDMYAKCGDLKTA 560
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANI 571
SMP KS W ++ A IH I + ++ +E H V NI
Sbjct: 561 QGVFNSMPEKSVVS-WSAMIAAYGIHGQITAATTLFTKM--VESHIKPNEVTFMNI 613
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 154/323 (47%), Gaps = 27/323 (8%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L +H+ + G+ +D + +YA+ L + LVF T S +S +
Sbjct: 14 LRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFE-------THPSPDSFM 66
Query: 231 GGCT-----YGDKFDDSLNFYRHMIYDGFR---------PDVTTVVSLLSSCVCPEALVQ 276
G + FD ++ Y H I G R P V +S++ LV
Sbjct: 67 FGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVG------GLVV 120
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR VH + G D + +L+ MY + G + AR +FD + R VSW+++++ Y +
Sbjct: 121 GRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVE 180
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G E L + M + G PD VT+LS+ CG+ G L L K Y + + +
Sbjct: 181 NGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASL 240
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N+LI MY +C + A+ +F ++ + + WT+MI+ C NG F EA+D F +M E ++
Sbjct: 241 RNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEV 300
Query: 457 RPNRVTFLAVLQACTHAGFLEKG 479
N VT ++VL C G+L++G
Sbjct: 301 EVNAVTMISVLCCCARLGWLKEG 323
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 196/431 (45%), Gaps = 9/431 (2%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
++C+ L +H H+V + SD T +++ YA+ L + +F+ P D
Sbjct: 9 RSCSTLRSL---SQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSF 65
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+ +I + ++V+ L+++ G Q + +A L + + VH
Sbjct: 66 MFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVH 125
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ G+ D + + + Y + L A VF I +R +VSW+S++ +
Sbjct: 126 GRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIR--VRDLVSWSSVVACYVENGR 183
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+ L R M+ +G PD T++S+ +C L + VH + I D S+ N+
Sbjct: 184 PREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNS 243
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
LI MY +C + A+ +F+ + D + WT+MIS Q G +EA+ F M+ + +
Sbjct: 244 LIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVN 303
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELF 417
VT++S++ C + G L+ GK + + ++ + AL+D Y+ C I +L
Sbjct: 304 AVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLL 363
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ +VVSW T+I+ A G EA+ LF M+E L P+ + + + AC A +
Sbjct: 364 CLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVR 423
Query: 478 KGWGYFNLMTK 488
G +TK
Sbjct: 424 FGQQIHGHVTK 434
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 12/262 (4%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+KI+ S + WN I + +AL LF M N ++ N +TF +AC+
Sbjct: 463 FDKIWEKSIVT-WNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGY 521
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
L + IH +V S D+++ T +VDMYAKC L A +F+ MP++ V SW+AMI
Sbjct: 522 LLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAA 581
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIG 185
+ G + LF M I+ + VT M + A HA + S+ +GI
Sbjct: 582 YGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMRDYGIVPN 641
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+ S+ + ++ D+ A + + + + + W +++ GC + D N
Sbjct: 642 AEHFASI----VDLLSRAGDIDGAYEIIKSTCQHIDASI-WGALLNGCRIHGRMDLIHNI 696
Query: 246 YRHMIYDGFRPDVTTVVSLLSS 267
++ + R + T +LLS+
Sbjct: 697 HKEL--REIRTNDTGYYTLLSN 716
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/579 (32%), Positives = 286/579 (49%), Gaps = 2/579 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I +A AL LF RM + + P+ A AC+ L + IHG+
Sbjct: 206 WTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAY 265
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ SD V ++D+Y KC RL A +LFD M +R++ SW MI G+ Q + +
Sbjct: 266 RTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMS 325
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F+ + G Q D + + + + VH+ I +++D V N I YA
Sbjct: 326 MFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYA 385
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + E +S+N++I G ++ + M Y +P + T
Sbjct: 386 KCEHLTEARAVFEALAE--DDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTF 443
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VSLL L + +H + G LD+ + LI +YSK +D A+ +F M +
Sbjct: 444 VSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQN 503
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V W AMI G AQ +EA++LF + +G P+ T +++++ ++ G+ F
Sbjct: 504 RDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQF 563
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G + + NALIDMY+KCG I + R LF + K V+ W +MI+ A +G
Sbjct: 564 HAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHA 623
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL +F M + PN VTF++VL AC HAG +++G +FN M Y V P HY+
Sbjct: 624 EEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYAS 683
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ +L GR GKL A +F++ MPI+ A IW +LL AC + N+EIG Y +P
Sbjct: 684 VVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPAD 743
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
+ P V M+NIYA G W LR M V K PG S
Sbjct: 744 SGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYS 782
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 254/544 (46%), Gaps = 12/544 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKK------NDIEPNNLTFPFIAK 62
RL S + W S I ALLLF + PN +
Sbjct: 86 RLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALR 145
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
ACA+ + + +HG K +++FV T +V++YAK R+D A +FD +P R+ +
Sbjct: 146 ACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVT 205
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
W A+I G++Q G L LF M L G++ D + A + + +H +
Sbjct: 206 WTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAY 265
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
++D SV N I Y KC+ L +A +F +E R +VSW ++I G ++
Sbjct: 266 RTAAESDASVVNALIDLYCKCSRLLLARRLFDSMEN--RNLVSWTTMIAGYMQNSLDTEA 323
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
++ + + G++PDV S+L+SC A+ QGR VH+H I + D V N LI M
Sbjct: 324 MSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDM 383
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+KC + AR +F+ + + +S+ AMI GYA+ GDL A+ +F M P L+T
Sbjct: 384 YAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTF 443
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+S++ LEL K G ++ +ALID+YSK + DA+ +F +
Sbjct: 444 VSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQN 503
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ-ACTHAGFLEKGWG 481
+ +V W MI G A N EA+ LF ++ L PN TF+A++ A T A
Sbjct: 504 RDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQF 563
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ ++ +P +++ + D+ + G ++E +S + D W +++ H
Sbjct: 564 HAQIIKAGADSDPHISN--ALIDMYAKCGFIEEGRLLFEST-LGKDVICWNSMISTYAQH 620
Query: 542 RNIE 545
+ E
Sbjct: 621 GHAE 624
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 207/419 (49%), Gaps = 10/419 (2%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H V S D+F+ ++ Y+K RL A +LFD MP R++ SW + I +AQ G
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 137 EKVLCLFYNMRLVGIQA-------DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ L LF G + +F+ L +A ++ + VH +G+DA+
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASAL-RACAQSRAARFGEQVHGVAAKLGLDAN 171
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V ++ YAK + A VF + R V+W ++I G + + +L + M
Sbjct: 172 VFVGTALVNLYAKAGRIDAAMSVFDALPA--RNPVTWTAVITGYSQAGQAGVALELFGRM 229
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
DG RPD + S S+C + GR +H + + D SV+N LI +Y KC +
Sbjct: 230 GLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRL 289
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
AR LFD M +R VSWT MI+GY Q EA+ +F+ + AG PD+ S+++ C
Sbjct: 290 LLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSC 349
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
G A+ G+ + L+ + V NALIDMY+KC + +AR +F AL E +S+
Sbjct: 350 GSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYN 409
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI G A G+ A+++F +M L+P+ +TF+++L + LE L+ K
Sbjct: 410 AMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVK 468
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 222/436 (50%), Gaps = 4/436 (0%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L RL + + W + I + + +A+ +F ++ + +P+ I +C
Sbjct: 291 LARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCG 350
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
L+ + +H H++K+ SD +V+ ++DMYAKC+ L A +F+ + + D S+NA
Sbjct: 351 SLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNA 410
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MI G+A++G L + +F MR ++ +T + L + L L K +H + G
Sbjct: 411 MIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSG 470
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D+ + I Y+K + + A+LVF ++ R +V WN++I G ++ ++++
Sbjct: 471 TSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQN--RDMVIWNAMIFGLAQNERGEEAVKL 528
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ + G P+ T V+L++ ++ G+ H+ I G D D + N LI MY+K
Sbjct: 529 FARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAK 588
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG I+ R LF+ + + W +MIS YAQ G +EAL +F ME AG P+ VT +S+
Sbjct: 589 CGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSV 648
Query: 366 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+S C +G ++ G F++ ++ ++++++ + G + A+E +P +
Sbjct: 649 LSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEP 708
Query: 425 VVS-WTTMIAGCALNG 439
V + W ++++ C L G
Sbjct: 709 VATIWRSLLSACHLFG 724
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 165/351 (47%), Gaps = 13/351 (3%)
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+L H+ + G+ D+ + N + Y+K L A +F + R +VSW S I
Sbjct: 48 VLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPS--RNLVSWGSAISM 105
Query: 233 CTYGDKFDDSLNFYRHMIY------DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
+ DD+L + DG P+ + S L +C A G VH
Sbjct: 106 YAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAK 165
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
G D +V V L+++Y+K G ID+A +FD + R V+WTA+I+GY+Q G AL L
Sbjct: 166 LGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALEL 225
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
F M G PD + S S C G +E G+ YA + + V NALID+Y K
Sbjct: 226 FGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCK 285
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
C + AR LF ++ + +VSWTTMIAG N EA+ +F Q+ + +P+ ++
Sbjct: 286 CSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSI 345
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEA 515
L +C G L W + V + + E + Y + + D+ + L EA
Sbjct: 346 LNSC---GSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEA 393
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 287/577 (49%), Gaps = 86/577 (14%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M+ + PN TF F+ +ACA L +HG IV+ F SD+FVQ ++D+Y +C
Sbjct: 101 MRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYYRCGG 160
Query: 105 LDCAY-----KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
++FD+M D+DV SWN+++ + G D M
Sbjct: 161 GGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSG-------------------DATGAM 201
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
GL +A + +V NT ++ +A+ D+ A VF +
Sbjct: 202 GLFEAM--------------------PERNVVSWNTVVAGFARTGDMVTARTVFDRMPS- 240
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
R VSWN +I G + + + + M D VVS +
Sbjct: 241 -RNAVSWNLMISGYATSGDVEAARSVFDRM-------DQKDVVSWTA------------- 279
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
++S Y+K GD+D+A+ LFD M + VSW AMI+GY
Sbjct: 280 -------------------MVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSR 320
Query: 340 LDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
DEALR F M G PD T++S++S C Q G++E W ++ V + N
Sbjct: 321 YDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLTVALGN 380
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
ALIDM++KCG +G A+ +FY + + +++WTTMI+G A NG EAL +++ M +
Sbjct: 381 ALIDMFAKCGDVGRAQSIFYKMETRCIITWTTMISGFAFNGLCREALLVYNNMCREGVEL 440
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ F+A L ACTH G L++GW FN M + Y + P + HY C+ DLLGR G L+EA+ F
Sbjct: 441 DGTVFIAALAACTHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAILF 500
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
++SMP++ IW TLL +C H N E+ EYV+ ++ ELEP +++ V ++N AL GRW
Sbjct: 501 IESMPLEPSVVIWVTLLSSCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCSALEGRW 560
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
DGV RT M+ ++K PG SL+ + + F +D
Sbjct: 561 DGVIGARTSMRNWGIEKVPGSSLIQVGSEVHEFLAKD 597
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 112/261 (42%), Gaps = 29/261 (11%)
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
Y M G P+ T LL +C VH + GF DV V N L+ +Y +
Sbjct: 98 YVAMRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYYR 157
Query: 306 CGDIDSA-----RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP--- 357
CG + R +FD M D+ VSW +++ Y GD A+ LF AM V
Sbjct: 158 CGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNT 217
Query: 358 ---------DLVTVLSMISGCGQSGALELGKWFDNYACSGGL-----------KDNVMVC 397
D+VT ++ A+ YA SG + + +V+
Sbjct: 218 VVAGFARTGDMVTARTVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSW 277
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDL 456
A++ Y+K G + A+ELF +P K +VSW MI G N + EAL F MM E
Sbjct: 278 TAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRF 337
Query: 457 RPNRVTFLAVLQACTHAGFLE 477
RP+ T ++V+ AC G +E
Sbjct: 338 RPDEATLVSVVSACAQLGSVE 358
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I + +AL F+ M + P+ T + ACA+L Y I I
Sbjct: 308 WNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFI 367
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
KS + + ++DM+AKC + A +F KM R + +W MI GFA G + L
Sbjct: 368 GKSNTHLTVALGNALIDMFAKCGDVGRAQSIFYKMETRCIITWTTMISGFAFNGLCREAL 427
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
++ NM G++ D + A H L
Sbjct: 428 LVYNNMCREGVELDGTVFIAALAACTHGGLL 458
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 307/594 (51%), Gaps = 3/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + +L LF M ++++ P+ I AC+ L + IH +++
Sbjct: 211 WTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVL 270
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S D+ ++D Y KC R+ LFD++ +++ SW MI G+ Q + + +
Sbjct: 271 RSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVE 330
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M +G + D + + L + +HS+ I + ++ D V N I Y+
Sbjct: 331 LVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYS 390
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KCN L A+ VF + +VV +N++I G + +L ++ M P T
Sbjct: 391 KCNALDDAKRVFDVVT--CHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTF 448
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VSLL L + +H I YGF LD + LI +YSKC I AR++F+G +
Sbjct: 449 VSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTN 508
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W ++ SGY + +EA +L+ ++ + E P+ T ++ + +L G+ F
Sbjct: 509 KDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQF 568
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N GL+ + + NAL+DMY+KCGS+ +A ++F + K W +MI+ A +G+
Sbjct: 569 HNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKV 628
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL +F M+ ++ PN VTF++VL AC+H GF+E G ++N M + Y + P + HY+
Sbjct: 629 EEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMAR-YGIEPGIEHYAS 687
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ LLGR G+L EA +F++ M I+ A +W +LL AC++ N+E+ ++ A ++P
Sbjct: 688 VVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMD 747
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++NI+A G W V LR M N V K PGQS + +NG+ F D
Sbjct: 748 SGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRD 801
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 252/537 (46%), Gaps = 11/537 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+S + KALL F ++ ++ N I +AC + +H ++
Sbjct: 109 WSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYV 168
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS F D++V T++V +YAK +D A +FD + + +W A+I G+ + G E L
Sbjct: 169 IKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSL 228
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M + D + + A +L K +H++ + DVS N I Y
Sbjct: 229 QLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFY 288
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC +K + +F ++ ++ ++SW ++I G +++ M G++PD
Sbjct: 289 TKCGRVKAGKALFDRLD--VKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYA 346
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+L+SC +AL GR +HS+ I + D V N LI MYSKC +D A+ +FD +
Sbjct: 347 CSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVT 406
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ V + AMI GY+++G L AL +F M P +T +S++ L+L K
Sbjct: 407 CHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQ 466
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G + +ALID+YSKC I DAR +F K +V W ++ +G L +
Sbjct: 467 IHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLK 526
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHY 499
EA L+ + RPN TF A+ A + L G + N + K+ + +P + +
Sbjct: 527 SEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITN- 585
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ D+ + G ++EA + + S + D W +++ H +E A R+FE
Sbjct: 586 -ALVDMYAKCGSVEEA-EKIFSSSVWKDTACWNSMISMYAQHGKVE----EALRMFE 636
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 204/395 (51%), Gaps = 3/395 (0%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
LY + +H +V D+F+ ++ Y K + A LFDKMP+R++ SW++++ +
Sbjct: 57 LYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMY 116
Query: 131 AQMGFLEKVLCLFYNMRLVGI-QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
Q+G+ EK L F + + + + + + +A + VHS+ I G D
Sbjct: 117 TQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGED 176
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + + YAK ++ A LVF G+ L+T V+W +II G T + + SL + M
Sbjct: 177 VYVGTSLVVLYAKHGEIDKARLVFDGLV--LKTPVTWTAIITGYTKSGRSEVSLQLFNLM 234
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
+ PD + S+L++C L G+ +H++ + +DVS N LI Y+KCG +
Sbjct: 235 MESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRV 294
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ + LFD + + +SWT MI+GY Q EA+ L M G PD S+++ C
Sbjct: 295 KAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSC 354
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
G AL+ G+ +Y L+ + V NALIDMYSKC ++ DA+ +F + +VV +
Sbjct: 355 GSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYN 414
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
MI G + G AL++F +M + P+ +TF+
Sbjct: 415 AMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFV 449
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 201/422 (47%), Gaps = 3/422 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + I + + +A+ L M + +P+ + +C + + + IH
Sbjct: 309 IISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHS 368
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++K D FV ++DMY+KC+ LD A ++FD + V +NAMI G+++ G+L
Sbjct: 369 YVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCG 428
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L +F MRL + F+T + L + L L K +H I G D + I
Sbjct: 429 ALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALID 488
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC+ ++ A VF G + +V WNS+ G K +++ Y + RP+
Sbjct: 489 VYSKCSCIRDARYVFEGTTN--KDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNE 546
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +L ++ +L G+ H+ + G + D + N L+ MY+KCG ++ A +F
Sbjct: 547 FTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSS 606
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ W +MIS YAQ G ++EALR+F M + P+ VT +S++S C G +E G
Sbjct: 607 SVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDG 666
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
N G++ + +++ + + G + +ARE + + W ++++ C +
Sbjct: 667 LQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRV 726
Query: 438 NG 439
G
Sbjct: 727 FG 728
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 167/332 (50%), Gaps = 7/332 (2%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L A + K + + VH + G+ DV + N + +Y K + A +F +
Sbjct: 46 LLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPN-- 103
Query: 221 RTVVSWNSIIGGCT---YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
R +VSW+S++ T Y +K ++ D + + S++ +CV + G
Sbjct: 104 RNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYI--LASIIRACVQRDGGEPG 161
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
VHS+ I GF DV V +L+ +Y+K G+ID AR +FDG+ +T V+WTA+I+GY +
Sbjct: 162 SQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS 221
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G + +L+LF M + +PD + S+++ C G L+ GK Y K +V
Sbjct: 222 GRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY 281
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
N LID Y+KCG + + LF L K ++SWTTMIAG N EA++L +M + +
Sbjct: 282 NVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWK 341
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
P+ +VL +C L+ G + + KV
Sbjct: 342 PDEYACSSVLTSCGSVDALQHGRQIHSYVIKV 373
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 5/279 (1%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +LL + V ++++ R VH + +G DV + N L+ Y K G + A LFD M
Sbjct: 43 LANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMP 102
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLF--FAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+R VSW++++S Y Q G ++AL F F ++ + + + S+I C Q E G
Sbjct: 103 NRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYI-LASIIRACVQRDGGEPG 161
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+Y G ++V V +L+ +Y+K G I AR +F L KT V+WT +I G +
Sbjct: 162 SQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS 221
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +L LF+ MME ++ P++ ++L AC+ G+L KG + + +++
Sbjct: 222 GRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYL-KGGKQIHAYVLRSETKMDVST 280
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
Y+ + D + G++K + +K+ W T++
Sbjct: 281 YNVLIDFYTKCGRVKAGKALFDRLDVKNIIS-WTTMIAG 318
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/579 (31%), Positives = 304/579 (52%), Gaps = 11/579 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI---VKSPFWSDI 89
EAH L + M D+ ++ + +AC KL ++IH + VK+P S
Sbjct: 69 KEAHDFL---KEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS-- 123
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
++ ++ MY C K+FD+M +++ SW +I +A+ G LEK + LF +M+
Sbjct: 124 -IENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS 182
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
GI+ + M L Q+ + L L K +HS I ++A+++V + Y +C L+ A
Sbjct: 183 GIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGA 242
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+LVF G++ + V+W ++ G T K + +L + M +G D +L C
Sbjct: 243 KLVFDGMDA--QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCC 300
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
E G+ +HSH + G + +VSV L+ Y KCGDI+SA F + + VSW+A
Sbjct: 301 XLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSA 360
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+ISG++Q G L++ +++F ++ + G V + S+ C L +G A G
Sbjct: 361 LISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRG 420
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L + +A++ MYSKCG + AR F ++ E V+WT +I+G A +G EAL F
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M +RPN VTF+AVL AC+H+G + + Y M++ Y V P ++HY CM D R
Sbjct: 481 RMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRA 540
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L EAL+ + MP + DA W +LL C H ++++G+ A LF L+P A Y+ +
Sbjct: 541 GLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLF 600
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
N+Y+ G+W+ ++R +M ++KK S + + G+
Sbjct: 601 NLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQV 639
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 210/416 (50%), Gaps = 4/416 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W I E KA+ LF M+ + I PN+ + + ++C S + +H H++
Sbjct: 156 WVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVI 215
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ ++I V+T + +MY +C L+ A +FD M ++ +W ++VG+ Q LE L
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALE 275
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M + G++ D + + + + K +HS + +G +++VSV + Y
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYV 335
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++ A F I E VSW+++I G + + +D + + + +G +
Sbjct: 336 KCGDIESAYRSFGRISEP--NDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+ +C L G H I G + + +++MYSKCG +D AR F+ + +
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-ELGKW 380
V+WTA+ISGYA G+ EAL F M++ G P+ VT +++++ C SG + E ++
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
+ + G+K + + +ID YS+ G + +A EL +P E +SW +++ GC
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGC 569
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 202/595 (33%), Positives = 309/595 (51%), Gaps = 3/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + +AL L+ RM + P+ TFP + ++C + D+ + +H H+
Sbjct: 156 SWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHV 215
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++ F ++ V ++ MYAKC + A K+FD M D SWNAMI G + G L
Sbjct: 216 LRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGL 275
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M +Q + +T+ +T A+ ++ K +H + G DV+ CN+ I Y
Sbjct: 276 ELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMY 335
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A ++ A VF ++ R ++W ++I G D +L Y M + PD T
Sbjct: 336 ASLGMMRQARTVFSRMDT--RDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDIT 393
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S L++C C +L G +H GF + V N ++ MY+K ID A +F M
Sbjct: 394 IASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMH 453
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++ VSW++MI+G+ EAL F M A + P+ VT ++ ++ C +GAL GK
Sbjct: 454 EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVK-PNSVTFIAALAACAATGALRSGKE 512
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G++ + NALID+Y KCG G A F A K VVSW MIAG +G
Sbjct: 513 IHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGH 572
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL F+QM+++ P+ VTF+A+L AC+ G + +GW F+ MT+ Y + P L HY+
Sbjct: 573 GDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYA 632
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLL R G+L EA +F+ MPI DA +WG LL C+IHR++E+GE A + LEP+
Sbjct: 633 CMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPN 692
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A +V + ++YA WD +A +R M+ + G S V + G F +D
Sbjct: 693 DAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDD 747
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 256 PDVTTVVSLLSSCVCPEALVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD V+L C A+ G H+ H F L + N ++SM + G+ A
Sbjct: 86 PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLG--NAMLSMLVRFGETWHAW 143
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F M +R SW M+ GY + G LDEAL L+ M AG PD+ T ++ CG
Sbjct: 144 RVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 203
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+G+ + G + V V NAL+ MY+KCG + AR++F ++ +SW MIA
Sbjct: 204 DWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIA 263
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
G NGE L+LF M+ +++PN +T +V A
Sbjct: 264 GHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA 299
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G L +AL L +E++ E PD +++ C A+E G +A + +
Sbjct: 70 GQLAQALWL---LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLG 126
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NA++ M + G A +F +PE+ V SW M+ G +G EALDL+H+MM +R
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186
Query: 458 PNRVTFLAVLQAC 470
P+ TF VL++C
Sbjct: 187 PDVYTFPCVLRSC 199
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 293/558 (52%), Gaps = 15/558 (2%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ K C L + +H I+KS + T+++ YA + AY LF +
Sbjct: 10 LIKQCVTLEAL---KSLHASILKSHLHPHLC--TSLIAQYASLGSISHAYALFSTSHSSN 64
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V WN +I F+ L L+ M +GIQA T L +A L H+
Sbjct: 65 VFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHA 124
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+ G ++DV V N+ ++ Y + + VF + E R VVSW+S++G + ++
Sbjct: 125 HVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPE--RNVVSWSSMVGAYAHNGRY 182
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG--RLVHSHGIHYGFDLDVSVIN 297
++ L + M+ +G P+ ++V+ ++ C+ E R+V I G D D SV N
Sbjct: 183 EEGLLLFWRMLNEGIAPNRGSIVNAMA-CIHREHEADDFCRVV----IDNGLDSDQSVQN 237
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
+ MY++CG ID AR F G+ D+ V+WT+MI Y Q AL LF M+ G VP
Sbjct: 238 AAMGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVP 297
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D VT+LS+I + +L ++ K+++ + A+ID+Y KCG++ AR+ F
Sbjct: 298 DSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCF 357
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ + ++SW+TMI+G ++G EAL LF QM + ++P+ + F+ VL AC+H G +
Sbjct: 358 DRMSARNLISWSTMISGYGMHGHGREALCLFDQM-KASIKPDHIAFVMVLSACSHGGLIA 416
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+GW F M + + V P HY+CM DLLGR G+L EA F++ MPI DAG+WG LL A
Sbjct: 417 EGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGA 476
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
C+IH N+E E A LF L+ + Y+ ++NIYA G+ ++R +MK V+K
Sbjct: 477 CRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTV 536
Query: 598 GQSLVHINGKTCTFTVED 615
G +++ I K TF D
Sbjct: 537 GHTIIEIKNKVYTFVAGD 554
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 222/459 (48%), Gaps = 9/459 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
SS + WN IR + + +L L+ RM + I+ N TFPF+ KAC L+DF
Sbjct: 62 SSNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGAR 121
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
H H+V + SD+FV +++ MY + D + ++F++MP+R+V SW++M+ +A G
Sbjct: 122 AHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGR 181
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ L LF+ M GI + +++ A IH +H + I G+D+D SV N
Sbjct: 182 YEEGLLLFWRMLNEGIAPNRGSIVN-AMACIHREHEA--DDFCRVVIDNGLDSDQSVQNA 238
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YA+C + +A F GI + + +V+W S+I D ++L ++ M G
Sbjct: 239 AMGMYARCGRIDVARRFFYGILD--KDLVAWTSMIEAYVQADLPINALELFKQMKLLGIV 296
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD T++SL+ + + R VH F +++ +I +Y KCG+++ AR
Sbjct: 297 PDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKC 356
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M R +SW+ MISGY G EAL LF M+A+ + PD + + ++S C G +
Sbjct: 357 FDRMSARNLISWSTMISGYGMHGHGREALCLFDQMKASIK-PDHIAFVMVLSACSHGGLI 415
Query: 376 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
G + F G+ ++D+ + G + +A+ +P W ++
Sbjct: 416 AEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLG 475
Query: 434 GCALNGEFVEALDLFHQMMELDLR-PNRVTFLAVLQACT 471
C ++ A + LD P R L+ + A +
Sbjct: 476 ACRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASS 514
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 292/582 (50%), Gaps = 9/582 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I A LF M + P+ T + C + + +HG
Sbjct: 119 WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS D V+ ++ Y+KC L A LF +M D+ SWN MI ++Q G E+ +
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F NM ++ VT++ L A H H + +H + G+ D+SV + + AY+
Sbjct: 239 VFKNMFEKNVEISPVTIINLLSA--HVSH----EPLHCLVVKCGMVNDISVVTSLVCAYS 292
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L AE ++ ++ ++V SI+ D ++ ++ + D +
Sbjct: 293 RCGCLVSAERLYASAKQD--SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V +L C + G +H + I G V+N LI+MYSK D+++ FLF+ + +
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKW 380
+SW ++ISG Q G A +F M G +PD +T+ S+++GC Q L LGK
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y ++ VC ALIDMY+KCG+ A +F ++ +W +MI+G +L+G
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL + +M E L+P+ +TFL VL AC H GF+++G F M K + ++P L HY+
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
M LLGR EAL + M IK D+ +WG LL AC IHR +E+GEYVA ++F L+
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ YV M+N+YA WD V +R MMK N + G S +
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 271/561 (48%), Gaps = 33/561 (5%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFP-FIAKACAKLSDF- 70
+YR ++ ++S ++ + + + +FR + ++ + PN+ T F+ + F
Sbjct: 9 LYRD--LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFK 66
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
L + + H+ KS ++V+T+++++Y K + A LFD+MP+RD WNA+I G+
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 126
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
++ G+ LF M G T++ L +S +SVH G++ D
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N IS Y+KC +L AE++FR +++ ++ VSWN++IG + ++++ +++M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
T+++LLS+ V E L H + G D+SV+ +L+ YS+CG +
Sbjct: 245 EKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA L+ + V T+++S YA+KGD+D A+ F D V ++ ++ GC
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+S +++G YA GL +V N LI MYSK + LF L E ++SW +
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 431 MIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I+GC +G A ++FHQMM L P+ +T ++L C+ L G L
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGK---ELHGYT 475
Query: 490 YQVNPELNHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ N E ++ C A D+ + G +A +S+ A W +++
Sbjct: 476 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TWNSMIS----------- 523
Query: 548 EYVAYRLFELEPHSAAPYVEM 568
Y L L+ + + Y+EM
Sbjct: 524 ---GYSLSGLQHRALSCYLEM 541
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/485 (36%), Positives = 265/485 (54%), Gaps = 40/485 (8%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
K++ LKS+H+ I + + + K DL A L+F+ ++E + +N+
Sbjct: 25 KNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYL--YNA 82
Query: 229 IIGGCTYGDKFDDSLNFYRHMIY-------DGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+I T+ + ++ FY+ M+ + PD T ++ SC G+ VH
Sbjct: 83 MIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVH 142
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR------------------- 322
+H +G ++++ N LI MY+KC + A +FDGM +R
Sbjct: 143 AHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMR 202
Query: 323 ------------TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
T VSWTAMISGY + G +AL +F M+ G PD ++++S++ C
Sbjct: 203 KAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACA 262
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
Q GALE+GKW Y GL +CNAL++MYSKCG IG A +LF + + V+SW+T
Sbjct: 263 QLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWST 322
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
MI G A +G+ EA++LF +M + + PN +TFL +L AC HAGF +G YF+ M+K Y
Sbjct: 323 MIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDY 382
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ PE+ HY C+ D+LGR G+L +ALD ++ MP+K D+ IWG+LL +C+ H N++I
Sbjct: 383 HIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIA 442
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
L ELEP YV ++NIYA +WDGV+ +R ++K +KK PG SL+ IN
Sbjct: 443 MEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQE 502
Query: 611 FTVED 615
F D
Sbjct: 503 FVSWD 507
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 193/444 (43%), Gaps = 44/444 (9%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
E N P I + C + + + IH H++K F+ T MVD+ K + L A
Sbjct: 12 ELENFFVP-ILQNCKNIVEL---KSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASL 67
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN--MRLVGIQA------DFVTVMGLT 162
LF ++ + + +NAMI + + LFY +RL ++ D T +
Sbjct: 68 LFKQVKEPNGYLYNAMIRAHTH-NKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVI 126
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE---- 218
++ +L K VH+ G +++++ N I Y KC L A VF G+ E
Sbjct: 127 KSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAI 186
Query: 219 -------------------------GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
RT+VSW ++I G T + D+L +R M G
Sbjct: 187 SWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVG 246
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD +++S+L +C AL G+ +H + G S+ N L+ MYSKCG I A
Sbjct: 247 VEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAY 306
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M +SW+ MI G A G EA+ LF M+ A P+ +T L ++S C +G
Sbjct: 307 QLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAG 366
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTM 431
G +FD+ + ++ V L+D+ + G + A ++ +P K W ++
Sbjct: 367 FWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSL 426
Query: 432 IAGCALNGEFVEALDLFHQMMELD 455
++ C + A+ + EL+
Sbjct: 427 LSSCRTHSNLDIAIIAMEHLEELE 450
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 169/378 (44%), Gaps = 46/378 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-------KKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+N+ IR A+L ++ M +N I P+ TFPF+ K+C+ L + +
Sbjct: 80 YNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGK 139
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN---------- 124
+H H+ K S+I ++ ++DMY KC L A+K+FD M +RD SWN
Sbjct: 140 QVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVG 199
Query: 125 ---------------------AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
AMI G+ ++G L +F M++VG++ D ++++ +
Sbjct: 200 QMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLP 259
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A L + K +H + G+ S+CN + Y+KC + A +F + +G V
Sbjct: 260 ACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKG--DV 317
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHS 282
+SW+++IGG K +++ ++ M P+ T + LLS+C +G S
Sbjct: 318 ISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDS 377
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WTAMISGYAQKGDLD 341
Y + +V L+ + + G + A + + M + W +++S +LD
Sbjct: 378 MSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLD 437
Query: 342 EALRLFFAMEAAGEV-PD 358
A+ AME E+ PD
Sbjct: 438 IAI---IAMEHLEELEPD 452
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 155/380 (40%), Gaps = 59/380 (15%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V +L +C + +V+ + +H+H I Y ++ ++ + K D+ A LF + +
Sbjct: 18 VPILQNC---KNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKE 74
Query: 322 RTRVSWTAMISGYAQKGDL-------DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+ AMI + E LRL PD T +I C
Sbjct: 75 PNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVC 134
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE------------------- 415
LGK + C G K N+ + NALIDMY+KC S+ DA +
Sbjct: 135 YNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISG 194
Query: 416 ------------LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
LF +P +T+VSWT MI+G G + +AL +F QM + + P+ ++
Sbjct: 195 HVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISI 254
Query: 464 LAVLQACTHAGFLEKG-WGYF-----NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
++VL AC G LE G W + L+ K N + YS + G + +A
Sbjct: 255 ISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYS-------KCGCIGQAYQ 307
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIE--IGEYVAYRLFELEPHSAAPYVEMANIYALG 575
M K D W T++ H I + + ++EP+ ++ + + A
Sbjct: 308 LFDQMS-KGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGIT-FLGLLSACAHA 365
Query: 576 GRW-DGVANLRTMMKRNQVK 594
G W +G+A +M K ++
Sbjct: 366 GFWNEGLAYFDSMSKDYHIE 385
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 4/251 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI W + I AL +FR+M+ +EP+ ++ + ACA+L + IH
Sbjct: 215 TIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIH 274
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ ++ + +++MY+KC + AY+LFD+M DV SW+ MI G A G
Sbjct: 275 MYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAR 334
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVSVCNTW 196
+ + LF M+ I+ + +T +GL A HA + L S ++ +V
Sbjct: 335 EAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCL 394
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ + L A V + + + W S++ C D ++ H+ + P
Sbjct: 395 VDILGRAGRLSQALDVIEKMPMKPDSKI-WGSLLSSCRTHSNLDIAIIAMEHL--EELEP 451
Query: 257 DVTTVVSLLSS 267
D T LLS+
Sbjct: 452 DDTGNYVLLSN 462
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 305/576 (52%), Gaps = 6/576 (1%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
L +M+ + PN TF + A A S +H IVK+ F FV ++ MY
Sbjct: 192 LINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYL 251
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
K + + A +FD M RD +WN MI G+A +GF + +F+ MRL G++
Sbjct: 252 KSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCT 311
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ + L+ K +H + G + + + Y+KC+ + A +F + +
Sbjct: 312 ALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF-SMADAA 370
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
VV+W ++IGG + + +++ + M +G RP+ T ++L+ P +L+ +
Sbjct: 371 HNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGK--PSSLLSQ--L 426
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+ I ++ SV L+ Y K G++ + +F + + V+W+AM++G AQ D
Sbjct: 427 HAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDS 486
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNA 399
++A+ +F + G P+ T S+I+ C S A +E GK A G + + V +A
Sbjct: 487 EKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSA 546
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+ MYSK G+I A ++F E+ +VSW +MI G +G+ +AL++F M L +
Sbjct: 547 LLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLD 606
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VTF+ VL ACTHAG +E+G YFN+M K Y ++ ++ HYSCM DL R G +A+D +
Sbjct: 607 DVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDII 666
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
MP + IW TLL AC++HRN+E+G+ A +L L+P+ A YV ++NI+A+ G W+
Sbjct: 667 NGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWE 726
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A++R +M +VKK G S + I + +F D
Sbjct: 727 EKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGD 762
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 243/509 (47%), Gaps = 29/509 (5%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I+ +N + + N +AL LF+ + + + + LT K C L D + + +H
Sbjct: 69 ISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHC 128
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+KS F D+ V T++VDMY K + + +FD+M ++V SW +++ G+A+ G ++
Sbjct: 129 QSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDE 188
Query: 139 VLCLFYNMRLVGIQAD---FVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
V+ L M++ G+ + F TV+G L +I + VH+ + G + VCN
Sbjct: 189 VIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGV----QVHAMIVKNGFEFTTFVCN 244
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I Y K + AE VF + +R V+WN +IGG + + + M G
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMV--VRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+ T + L C L + +H + G++ + L+ YSKC +D A
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362
Query: 315 LFDGMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG---- 368
LF M D V+WTAMI G+ Q + ++A+ LF M G P+ T ++++G
Sbjct: 363 LFS-MADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421
Query: 369 -CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
Q A + +++ V AL+D Y K G++ ++ +FY++P K +V+
Sbjct: 422 LLSQLHAQIIKAYYEKVPS---------VATALLDAYVKTGNVVESARVFYSIPAKDIVA 472
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC-THAGFLEKGWGYFNLM 486
W+ M+ G A + +A+++F Q+++ ++PN TF +V+ AC + A +E G
Sbjct: 473 WSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATA 532
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEA 515
K + N L S + + +KG ++ A
Sbjct: 533 VKSGKSNA-LCVSSALLTMYSKKGNIESA 560
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 200/440 (45%), Gaps = 11/440 (2%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A++LFD+ P +D++ +N ++ F++ + L LF ++ G+ D +T+ +
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + VH + G DVSV + + Y K D + +F E G++ VVSW
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFD--EMGIKNVVSWT 174
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL-VHSHGIH 286
S++ G D+ ++ M +G P+ T ++L + + E++++G + VH+ +
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGA-LADESIIEGGVQVHAMIVK 233
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
GF+ V N LI MY K + A +FD M R V+W MI GYA G E ++
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
F M AG + + C Q L K G + + AL+ YSK
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 407 CGSIGDARELF-YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
C S+ +A +LF A VV+WT MI G N +A+DLF QM +RPN T+
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL A + L + + ++ Y+ P + + + D + G + E+ S+P K
Sbjct: 414 VL-AGKPSSLLSQ--LHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK 468
Query: 526 SDAGIWGTLLCACKIHRNIE 545
D W +L R+ E
Sbjct: 469 -DIVAWSAMLTGLAQTRDSE 487
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/561 (33%), Positives = 291/561 (51%), Gaps = 19/561 (3%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVA 121
C++ S ++ IH ++ + S F+ ++++YAKC +D LF PD ++V
Sbjct: 39 CSRTSK--HATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVV 96
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL------TQAAIHAKHLSLLK 175
SW ++I + K L F +MR G+ + T + T A++H + +
Sbjct: 97 SWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQM---- 152
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
HS G A+V V + + YAKC D+ MAE VF E +R +VSWN++I G
Sbjct: 153 --HSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFE--EMPVRNLVSWNTMIVGFLQ 208
Query: 236 GDKFDDSLNFYRHMIYDGFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+D ++ F++ ++ + D + S+ S+C L G+ VH + G V
Sbjct: 209 NKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 268
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
+ N+L MY KCG + LF R V+W MI Y + ++A F+ M G
Sbjct: 269 INNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKG 328
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+PD + S++ C AL G N G N+ V ++LI MY+KCGS+ DA
Sbjct: 329 SIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAF 388
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F ++ VV WT +IA C +G ++LF QM+ ++P+ +TF++VL AC+H G
Sbjct: 389 QIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTG 448
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+E+G+ YFN M KV+ + P HY+C+ DLL R G+L A F++ MPIK DA +WG L
Sbjct: 449 RVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGAL 508
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L AC+ H N+ +G+ VA +LF+LEP + YV + NI G + +R M+ V+
Sbjct: 509 LSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVR 568
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K PG S + I T FTV D
Sbjct: 569 KEPGCSWIDIKNSTYVFTVHD 589
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 230/472 (48%), Gaps = 16/472 (3%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W S I + KAL F M+++ + PN+ TF + AC + ++ +
Sbjct: 92 SKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQ 151
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H + K F +++FV + +VDMYAKC + A K+F++MP R++ SWN MIVGF Q
Sbjct: 152 MHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKL 211
Query: 136 LEKVLCLFYNMRLVGIQA-DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ + F + L + A D V+ + A +A +L K VH + +GV V + N
Sbjct: 212 YDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINN 271
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y KC +F G R VV+WN +I Y ++D+ N + M G
Sbjct: 272 SLSDMYGKCGLFNDVAKLFSNT--GARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGS 329
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD + S+L SC AL QG L+H+ I GF ++ V ++LI+MY+KCG + A
Sbjct: 330 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQ 389
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+ DR V WTA+I+ Q G + + LF M G PD +T +S++S C +G
Sbjct: 390 IFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGR 449
Query: 375 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMI 432
+E G +F++ G+ ++D+ S+ G + A+ +P K S W ++
Sbjct: 450 VEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALL 509
Query: 433 AGCALNGEFVE----ALDLFHQMMELDLRP-NRVTFLAVLQACTHAGFLEKG 479
+ C + + AL LF DL P N ++ + T G L +
Sbjct: 510 SACRNHSNLIMGKEVALKLF------DLEPDNPGNYVLLCNILTRNGMLNEA 555
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 319/590 (54%), Gaps = 16/590 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I +K+E AL RM N ++ +++T+ C +FL+ +H
Sbjct: 139 IVSWNT-ILSGFEKSE--NALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHT 195
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG--FL 136
+K F D+FV +V MY++ + L A K+FD+MP RD SW+AMI G+AQ G L
Sbjct: 196 LALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGL 255
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ +L +F M G++ D V + G H ++L L K +H + G + SV N
Sbjct: 256 QAIL-VFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVL 314
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
IS Y+KC ++ A+ VF I + R V+SW ++I G +++ + M DG P
Sbjct: 315 ISTYSKCEIIEDAKAVFELIND--RNVISWTTMISLYEEG-----AVSLFNKMRLDGVYP 367
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T + LL + + QG +VH I F +++V N+LI+MY+K + A +F
Sbjct: 368 NDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVF 427
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFF--AMEAAGEVPDLVTVLSMISGCGQSGA 374
+ R +SW A+ISGYAQ EAL F ME +VL+ IS G+ +
Sbjct: 428 IELPYREIISWNALISGYAQNALCQEALEAFLYAIMEYKPNEYTFGSVLNAIS-AGEDIS 486
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+ G+ ++ GL + ++ AL+DMY+K GSI +++ +F +++ +WT +I+G
Sbjct: 487 LKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISG 546
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A +G++ + LF +M + ++P+ V FL+VL AC+ ++ G +FN+M K + + P
Sbjct: 547 YAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEP 606
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
E HYSCM D+LGR G+L+EA + + +P +LL AC+ H N+E+ E +A L
Sbjct: 607 EGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDL 666
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
+ EP + PYV M+N+YA G W+ VA +R M+ V K G S V +
Sbjct: 667 MKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWVDV 716
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 152/552 (27%), Positives = 252/552 (45%), Gaps = 31/552 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA--KACAKLSDFLYSQMIHGH 79
+N + + ++ A ++L F+ + ++ N F + KAC + IHG
Sbjct: 41 FNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGFPKL--GRQIHGF 98
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
++ S F S I V ++++MY K +L+ A+ +F + D D+ SWN ++ GF + E
Sbjct: 99 VISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKS---ENA 155
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L M L G++ D VT + + +H+ + G DV V N ++
Sbjct: 156 LSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTM 215
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y++ L A VF E R VSW+++I G GD ++ + M+ +G + D
Sbjct: 216 YSRWEHLVDARKVFD--EMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDN 273
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+ LS C L G+ +H + G + SV N LIS YSKC I+ A+ +F+
Sbjct: 274 VPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFEL 333
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ DR +SWT MIS Y + A+ LF M G P+ VT + ++ +E G
Sbjct: 334 INDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQG 388
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ V N+LI MY+K + DA +F LP + ++SW +I+G A N
Sbjct: 389 LMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQN 448
Query: 439 GEFVEALDLF-HQMMELDLRPNRVTFLAVLQACTHAG---FLEKGWGYFNLMTKV-YQVN 493
EAL+ F + +ME +PN TF +VL A + AG L+ G + + KV V+
Sbjct: 449 ALCQEALEAFLYAIME--YKPNEYTFGSVLNAIS-AGEDISLKHGQRCHSHLIKVGLNVD 505
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P ++ + D+ ++G ++E+ +S W L+ H + E +
Sbjct: 506 PIIS--GALLDMYAKRGSIQESQRVFNETSKQSQFA-WTALISGYAQHGDYE----SVIK 558
Query: 554 LF-ELEPHSAAP 564
LF E+E P
Sbjct: 559 LFEEMEKERIKP 570
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 199/375 (53%), Gaps = 17/375 (4%)
Query: 109 YKLFDKMPDRDVASWNAMIVGF-AQMGFLEKVLCLFYNMR--LVGIQADFVTVMGLTQAA 165
+ LFD+ P + AS+N +++ + + G + + N R L G +F V+ L
Sbjct: 27 HNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACC 86
Query: 166 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
K L + +H F I G + ++V N+ ++ Y K L+ A VF+ + + +VS
Sbjct: 87 GFPK---LGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHD--PDIVS 141
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
WN+I+ G +K +++L+F M +G + D T + LS C+ E + G +H+ +
Sbjct: 142 WNTILSGF---EKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLAL 198
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-EAL 344
GF DV V N L++MYS+ + AR +FD M R RVSW+AMI+GYAQ+GD +A+
Sbjct: 199 KCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAI 258
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
+F M G D V + +S CG LELGK A G + + V N LI Y
Sbjct: 259 LVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTY 318
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKC I DA+ +F + ++ V+SWTTMI +L E A+ LF++M + PN VTF+
Sbjct: 319 SKCEIIEDAKAVFELINDRNVISWTTMI---SLYEE--GAVSLFNKMRLDGVYPNDVTFI 373
Query: 465 AVLQACTHAGFLEKG 479
+L A T +E+G
Sbjct: 374 GLLHAITIRNMVEQG 388
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 310/597 (51%), Gaps = 4/597 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS + + A M ++ I N + + AC D + +HG
Sbjct: 178 IVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHG 237
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++KS S + + +VDMY K L+ + ++F+ M +++ SWN+ + FA GF E
Sbjct: 238 LVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHED 297
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
VL +F M + VT+ L A + + L K VH + I +++D+ + N+ +
Sbjct: 298 VLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMD 357
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAK L+ A +F IE R VVSWN++I ++ + M +G P+
Sbjct: 358 MYAKFGCLEKASAIFENIEG--RNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNS 415
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+V+LL +C ++ G+ +H+ IH D+ V N LI +Y+KCG + A+ +FD
Sbjct: 416 FTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFD- 474
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
++ VS+ +I GY+Q E+L LF M +AG D V+ + +S C A + G
Sbjct: 475 RSEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQG 534
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K L + + N+L+D+Y+K G + A ++F + K V SW TMI G ++
Sbjct: 535 KEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMH 594
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+ A +LF M + + + V+++AVL AC+H G +++G YF+ M + P+ H
Sbjct: 595 GQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMI-AQNIKPQQMH 653
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM DLLGR G+L E+++ + +MP +++ +WG LL +C+IH +IE+ A LFEL+
Sbjct: 654 YACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELK 713
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + Y + N+Y+ G W+ ++T+MK +V+K P S V K F V D
Sbjct: 714 PEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 770
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 265/560 (47%), Gaps = 17/560 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH-- 79
WNS R +AL ++ M ++ + P++ TFPF A A G
Sbjct: 74 WNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAEL 133
Query: 80 ----IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+ + +D+F T+V YA R A ++FD+MP RD+ SWN+++ G
Sbjct: 134 HAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGM 193
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
LE M GI + +++ + A + SVH + G+D+ V++ N
Sbjct: 194 LEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNA 253
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y K DL+ + VF G++E + VSWNS +G + +D L +R M
Sbjct: 254 LVDMYGKFGDLESSMRVFNGMQE--KNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVT 311
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P T+ SLL + V G+ VH + I + D+ + N+L+ MY+K G ++ A +
Sbjct: 312 PGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAI 371
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ + R VSW AMI+ AQ G EA L M+ GE P+ T+++++ C + ++
Sbjct: 372 FENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASV 431
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
++GK ++ L ++ V NALID+Y+KCG + A+++F EK VS+ T+I G
Sbjct: 432 KMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIF-DRSEKDDVSYNTLIVGY 490
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN-LMTKVYQVNP 494
+ + E+L LF QM + + V+F+ L AC + ++G L+ ++ +P
Sbjct: 491 SQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHP 550
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
L + + DL + G L A + + D W T++ +H I+ VA+ L
Sbjct: 551 FL--ANSLLDLYTKGGMLATASKIFNRI-TRKDVASWNTMILGYGMHGQID----VAFEL 603
Query: 555 FELEPHSAAPYVEMANIYAL 574
F+L Y ++ I L
Sbjct: 604 FDLMKDDGVDYDHVSYIAVL 623
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 21/413 (5%)
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD-----FVTVMGLTQAAIHAKHLS 172
R WN++ A G + L ++ M G++ D F A+H +
Sbjct: 69 RSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPA 128
Query: 173 LLKSVHSFGIHIGVD-ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+H+ + G+ ADV NT ++ YA A VF E R +VSWNS++
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFD--EMPARDIVSWNSLVS 186
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+D+ M+ G +V ++VS++ +C G VH + G D
Sbjct: 187 ALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDS 246
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
V++ N L+ MY K GD++S+ +F+GM ++ VSW + + +A G ++ L +F M
Sbjct: 247 VVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMS 306
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
P VT+ S++ G LGK Y+ ++ ++ + N+L+DMY+K G +
Sbjct: 307 EHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLE 366
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A +F + + VVSW MIA A NG EA L +M + PN T + +L AC+
Sbjct: 367 KASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACS 426
Query: 472 HAGFLEKG-----WG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
++ G W + +LM+ ++ N + D+ + G+L A D
Sbjct: 427 RVASVKMGKQIHAWSIHRSLMSDLFVSN-------ALIDVYAKCGQLSVAQDI 472
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 139/314 (44%), Gaps = 7/314 (2%)
Query: 173 LLKSVHSFGIHIG-VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
LL+ H+ + G + A + + + +YA D+ A L+ R LR+ WNS+
Sbjct: 20 LLRRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSR 79
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL-----VQGRLVHSHGIH 286
++L Y M+ G RPD T L + +G +H+ +
Sbjct: 80 ALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALR 139
Query: 287 YGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
G L DV NTL++ Y+ G AR +FD M R VSW +++S G L++A R
Sbjct: 140 RGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKR 199
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
M +G ++ +++S++ CG G GL V + NAL+DMY
Sbjct: 200 AVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYG 259
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
K G + + +F + EK VSW + + A G + L++F M E ++ P VT +
Sbjct: 260 KFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSS 319
Query: 466 VLQACTHAGFLEKG 479
+L A G+ G
Sbjct: 320 LLPALVDLGYFHLG 333
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 307/586 (52%), Gaps = 15/586 (2%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
K L+F M+ + + P+ T + CA F + IH ++S S + V +V
Sbjct: 229 KCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALV 288
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ---MGFLEKVLCLFYNMRLVGIQA 153
+MY+ +L A LF M RD+ SWN MI + Q K L ++ +
Sbjct: 289 NMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHL 348
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
F + +G A L K VH+ + + + ++ V N+ I+ Y KCN ++ AE VF
Sbjct: 349 TFSSALG---ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVF 405
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
+ + VVS+N +IGG + ++ + + G +P+ T++++ S
Sbjct: 406 QSMPT--HDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSND 463
Query: 274 LVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
L GR +H++ I GF D V N+LI+MY+KCG+++S+ +F+ + ++ VSW A+I+
Sbjct: 464 LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIA 523
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
AQ G +EAL+LF M+ AG D V + +S C +LE G GL
Sbjct: 524 ANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDS 583
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS---WTTMIAGCALNGEFVEALDLFH 449
+ V NA +DMY KCG + E+ +P++ + W T+I+G A G F EA + F
Sbjct: 584 DSYVVNAAMDMYGKCGKMN---EMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFK 640
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
QM+ + +P+ VTF+A+L AC+HAG ++KG Y+N M + V+P + H C+ DLLGR
Sbjct: 641 QMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRL 700
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G+ EA F++ MP+ + IW +LL + + H+N+EIG A +L EL+P + YV ++
Sbjct: 701 GRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLS 760
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
N+YA RW V LR+ MK + K P S + + + TF + D
Sbjct: 761 NLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGD 806
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 236/506 (46%), Gaps = 17/506 (3%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+ L +R+M++ + N F + C L + + + H++ S + + V +++
Sbjct: 128 ETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLI 187
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
M+ R+ A KLFD+M + D S NAMI ++ G K +F +MR G++ D
Sbjct: 188 TMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDAT 247
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T+ L A H S +HS + +D+ V+V N ++ Y+ L AE +F +
Sbjct: 248 TLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 307
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R ++SWN++I D+L + + P+ T S L +C P AL+
Sbjct: 308 SR--RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALID 365
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G++VH+ + ++ V N+LI+MY KC ++ A +F M VS+ +I GYA
Sbjct: 366 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAV 425
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE-LGKWFDNYACSGGLKDNVM 395
D +A+++F + +AG P+ +T++++ S L G+ Y G +
Sbjct: 426 LEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEY 485
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V N+LI MY+KCG++ + +F ++ K +VSW +IA A G EAL LF M
Sbjct: 486 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAG 545
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMADLLGRK 509
+ +RV L +C LE+G L K Y VN + D+ G+
Sbjct: 546 NKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM-------DMYGKC 598
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLL 535
GK+ E L V I+ W TL+
Sbjct: 599 GKMNEMLQMVPDQAIRPQQ-CWNTLI 623
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 218/455 (47%), Gaps = 11/455 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL---SDFLYSQ 74
T + W + + V A L R M++ + + + AC +
Sbjct: 5 TPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGA 64
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++ ++++ T ++ +Y + A +LF +MP+R+V SW A++V + G
Sbjct: 65 AIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNG 124
Query: 135 FLEKVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+LE+ L + MR G+ + F TV+ L ++ + L V S I G+ VS
Sbjct: 125 YLEETLRAYRQMRREGVPCNANAFATVVSLC-GSLENEVPGL--QVASHVIVSGLQNQVS 181
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N+ I+ + ++ AE +F +EE +S N++I ++ + M +
Sbjct: 182 VANSLITMFGNLGRVQDAEKLFDRMEE--HDTISRNAMISMYSHQGICSKCFLVFSDMRH 239
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G RPD TT+ SL+S C + G +HS + D V+VIN L++MYS G +
Sbjct: 240 HGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A FLF M R +SW MIS Y Q + +AL+ + E+P+ +T S + C
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSS 359
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
GAL GK L+ N++V N+LI MY KC S+ DA ++F ++P VVS+ +
Sbjct: 360 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVL 419
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
I G A+ + +A+ +F + ++PN +T + +
Sbjct: 420 IGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINI 454
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 185/414 (44%), Gaps = 10/414 (2%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA---KHL 171
MPDR ++W + G + G L MR G+ + L A + +
Sbjct: 1 MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ ++H+ G+ +V + + Y + A +F + E R VVSW +++
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPE--RNVVSWTALMV 118
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ +++L YR M +G + +++S C E V G V SH I G
Sbjct: 119 ALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQN 178
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
VSV N+LI+M+ G + A LFD M + +S AMIS Y+ +G + +F M
Sbjct: 179 QVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMR 238
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G PD T+ S++S C + G + L +V V NAL++MYS G +
Sbjct: 239 HHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
DA LF+ + + ++SW TMI+ N +AL Q+ + PN +TF + L AC+
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACS 358
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMP 523
G L G + V Q++ + N + + + G+ +++A QSMP
Sbjct: 359 SPGALIDGKMVHAI---VLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 409
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN+ I +AL LF M+ + + + +CA L+ +H
Sbjct: 514 NIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH 573
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G +KS SD +V +DMY KC +++ ++ R WN +I G+A+ G+ +
Sbjct: 574 GLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFK 633
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSV-HSFGIHIGV 186
+ F M +G + D+VT + L A HA K + S+ SFG+ G+
Sbjct: 634 EAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGI 687
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 201/615 (32%), Positives = 309/615 (50%), Gaps = 85/615 (13%)
Query: 35 AHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQT 93
AH ++ LF+ ++ P + ++ K K + M H +++K D F++
Sbjct: 80 AHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN-----MFHAYVLKLGHIDDHFIRN 134
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
++DMYAK ++D A LF++M +R +A WN+MI G + G + + LF M
Sbjct: 135 AILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA----- 189
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
++ + ++ YAK DL+ A F
Sbjct: 190 ----------------------------------RNIITWTSMVTGYAKMGDLESARRYF 215
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC----- 268
+ E R+VVSWN++ + ++LN + M+ +G PD TT V +SSC
Sbjct: 216 DEMPE--RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGD 273
Query: 269 ---------------VCPEALVQGRLVHSHGIHYGFDLDVSVI------------NTLIS 301
+ + V+ L+ H ++ ++ N +IS
Sbjct: 274 PTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMIS 333
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLV 360
Y++ G + AR LFD M R VSW +MI+GYAQ G+ ++ LF M + ++ PD V
Sbjct: 334 AYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEV 393
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+ S++S CG GAL+L W + +K + N+LI MYSKCGS+ DA +F +
Sbjct: 394 TIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+ VVS+ T+I+G A NG EA+ L M E + P+ VT++ VL AC+HAG L +G
Sbjct: 454 GTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK 513
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
F + P ++HY+CM DLLGR G+L EA +QSMP+K AG++G+LL A +I
Sbjct: 514 NVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRI 568
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+ + +GE A +LFELEP + YV ++NIYA GRW+ V +R MMK+ +KK G S
Sbjct: 569 HKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMS 628
Query: 601 LVHINGKTCTFTVED 615
V G+ FTV D
Sbjct: 629 WVEYKGQVHKFTVGD 643
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 187/448 (41%), Gaps = 96/448 (21%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS I +A++LF M
Sbjct: 160 TLADWNSMISGCWKSGNETEAVVLFNMMPAR----------------------------- 190
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I T+MV YAK L+ A + FD+MP+R V SWNAM +AQ +
Sbjct: 191 ----------NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 138 KVLCLFYNMRLVGIQADFVT-VMGLTQAA--------------IHAKHLSL-------LK 175
+ L LF+ M GI D T V+ ++ + I KH+ L L
Sbjct: 241 EALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALL 300
Query: 176 SVHS-FGI---------HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
+H+ FG +G + N ISAY + L +A +F + + R VVS
Sbjct: 301 DMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK--RDVVS 358
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
WNS+I G + S+ ++ MI +PD T+ S+LS+C AL V
Sbjct: 359 WNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIV 418
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
L +S N+LI MYSKCG + A +F M R VS+ +ISG+A G EA+
Sbjct: 419 REKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAI 478
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK---------WFDNYACSGGLKDNVM 395
+L ME G PD VT + +++ C +G L GK D+YAC
Sbjct: 479 KLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYAC--------- 529
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEK 423
++D+ + G + +A+ L ++P K
Sbjct: 530 ----MVDLLGRAGELDEAKMLIQSMPMK 553
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 298/567 (52%), Gaps = 5/567 (0%)
Query: 38 ALLLFRRMKKNDIEPNN--LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
AL L R M++ E ++ + KA + +DF Y + +H + VK+ +D FV +
Sbjct: 105 ALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAG-GADGFVMNCL 163
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
VDMYAK L+ A K+FD++ R+V SW +M+ G Q GF E+ L LF MR +
Sbjct: 164 VDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSE 223
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
T+ + A L + VH I G+ + + + Y KC +++ A +F
Sbjct: 224 YTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFD- 282
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
E G +V W ++I G T D+L + + P+ T+ ++LS+ L
Sbjct: 283 -ELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLS 341
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
GRL+H+ + + V+N L+ MY+KC + A +F + ++ V+W ++I+GY
Sbjct: 342 LGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYV 401
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+ +EAL LF M G PD +++++ +S C G L +GK F YA NV
Sbjct: 402 ENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVY 461
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V AL+++Y+KC + A+ +F + E+ V+W MI G + G+ ++DL ++M++ +
Sbjct: 462 VNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDN 521
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++PN V F ++L C+H G + G F+ M + + + P + HY+CM D+L R G L+EA
Sbjct: 522 IQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEA 581
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
L+F+Q MP+ +D IWG L CK+H +E GE R+ L P YV M+N+Y
Sbjct: 582 LEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSY 641
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLV 602
GRWD +R +M+ + K PG S V
Sbjct: 642 GRWDKSLAIRRLMQERGLVKLPGCSSV 668
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 226/453 (49%), Gaps = 6/453 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ W S + + A + L LF M++ + P+ T + AC L + +H
Sbjct: 187 NVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVH 246
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G ++K + F+ ++DMY KC ++ A +LFD++ D+ W MIVG+ Q G
Sbjct: 247 GSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPL 306
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L LF + + V I + VT+ + A+ ++LSL + +H+ + + V + V N +
Sbjct: 307 DALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALV 366
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC L A +F I + VV+WNS+I G D +++L + M G PD
Sbjct: 367 DMYAKCKALSEANGIFGRISN--KDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPD 424
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
++V+ LS+CVC L+ G+ H++ + F +V V L+++Y+KC D+ SA+ +F
Sbjct: 425 AISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFS 484
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M +R V+W AMI GY +GD ++ L M P+ V S++S C +G + +
Sbjct: 485 EMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSV 544
Query: 378 GKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
GK FD+ A + ++ ++D+ ++ G++ +A E +P +S W + GC
Sbjct: 545 GKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGC 604
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
L+ + ++MM L P++ F ++
Sbjct: 605 KLHSRLEFGEEAINRMMV--LHPDKPDFYVLMS 635
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 133/275 (48%), Gaps = 10/275 (3%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
LL +C +L R +H+ + +G + L+S Y+ GD+ SAR + D
Sbjct: 29 LLPACATLPSL---RALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPD 85
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSM-ISGCGQSGALELGKWF 381
++ + +A G +AL L M E D V +LS+ + +S G+
Sbjct: 86 PYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRL 145
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
A G D V N L+DMY+K G + +AR++F + + VVSWT+M++GC NG
Sbjct: 146 HCNAVKAGGADG-FVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFA 204
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYS 500
E L LF++M E + P+ T +VL ACT G L +G W + +++ NP + +
Sbjct: 205 EEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFIT--A 262
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ D+ + G++++A + D +W T++
Sbjct: 263 AVLDMYVKCGEVEDARRLFDELGF-VDLVLWTTMI 296
>gi|116831059|gb|ABK28484.1| unknown [Arabidopsis thaliana]
Length = 583
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 292/582 (50%), Gaps = 9/582 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I A LF M + P+ T + C + + +HG
Sbjct: 9 WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 68
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS D V+ ++ Y+KC L A LF +M D+ SWN MI ++Q G E+ +
Sbjct: 69 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 128
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F NM ++ VT++ L A H H + +H + G+ D+SV + + AY+
Sbjct: 129 VFKNMFEKNVEISPVTIINLLSA--HVSH----EPLHCLVVKCGMVNDISVVTSLVCAYS 182
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L AE ++ ++ ++V SI+ D ++ ++ + D +
Sbjct: 183 RCGCLVSAERLYASAKQ--DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 240
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V +L C + G +H + I G V+N LI+MYSK D+++ FLF+ + +
Sbjct: 241 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 300
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKW 380
+SW ++ISG Q G A +F M G +PD +T+ S+++GC Q L LGK
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 360
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y ++ VC ALIDMY+KCG+ A +F ++ +W +MI+G +L+G
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL + +M E L+P+ +TFL VL AC H GF+++G F M K + ++P L HY+
Sbjct: 421 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 480
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
M LLGR EAL + M IK D+ +WG LL AC IHR +E+GEYVA ++F L+
Sbjct: 481 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 540
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ YV M+N+YA WD V +R MMK N + G S +
Sbjct: 541 NGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 218/457 (47%), Gaps = 29/457 (6%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
MP+RD WNA+I G+++ G+ LF M G T++ L +S
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+SVH G++ D V N IS Y+KC +L AE++FR +++ ++ VSWN++IG +
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYS 118
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
++++ +++M T+++LLS+ V E L H + G D+S
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDIS 172
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V+ +L+ YS+CG + SA L+ + V T+++S YA+KGD+D A+ F
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D V ++ ++ GC +S +++G YA GL +V N LI MYSK +
Sbjct: 233 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 292
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHA 473
LF L E ++SW ++I+GC +G A ++FHQMM L P+ +T ++L C+
Sbjct: 293 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 352
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIW 531
L G L + N E ++ C A D+ + G +A +S+ A W
Sbjct: 353 CCLNLGK---ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TW 408
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEM 568
+++ Y L L+ + + Y+EM
Sbjct: 409 NSMIS--------------GYSLSGLQHRALSCYLEM 431
>gi|4544411|gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana]
gi|91806147|gb|ABE65802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 582
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 292/582 (50%), Gaps = 9/582 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I A LF M + P+ T + C + + +HG
Sbjct: 9 WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 68
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS D V+ ++ Y+KC L A LF +M D+ SWN MI ++Q G E+ +
Sbjct: 69 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 128
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F NM ++ VT++ L A H H + +H + G+ D+SV + + AY+
Sbjct: 129 VFKNMFEKNVEISPVTIINLLSA--HVSH----EPLHCLVVKCGMVNDISVVTSLVCAYS 182
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L AE ++ ++ ++V SI+ D ++ ++ + D +
Sbjct: 183 RCGCLVSAERLYASAKQ--DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 240
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V +L C + G +H + I G V+N LI+MYSK D+++ FLF+ + +
Sbjct: 241 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 300
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKW 380
+SW ++ISG Q G A +F M G +PD +T+ S+++GC Q L LGK
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 360
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y ++ VC ALIDMY+KCG+ A +F ++ +W +MI+G +L+G
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL + +M E L+P+ +TFL VL AC H GF+++G F M K + ++P L HY+
Sbjct: 421 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 480
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
M LLGR EAL + M IK D+ +WG LL AC IHR +E+GEYVA ++F L+
Sbjct: 481 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 540
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ YV M+N+YA WD V +R MMK N + G S +
Sbjct: 541 NGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 218/457 (47%), Gaps = 29/457 (6%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
MP+RD WNA+I G+++ G+ LF M G T++ L +S
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+SVH G++ D V N IS Y+KC +L AE++FR +++ ++ VSWN++IG +
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYS 118
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
++++ +++M T+++LLS+ V E L H + G D+S
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDIS 172
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V+ +L+ YS+CG + SA L+ + V T+++S YA+KGD+D A+ F
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D V ++ ++ GC +S +++G YA GL +V N LI MYSK +
Sbjct: 233 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 292
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHA 473
LF L E ++SW ++I+GC +G A ++FHQMM L P+ +T ++L C+
Sbjct: 293 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 352
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIW 531
L G L + N E ++ C A D+ + G +A +S+ A W
Sbjct: 353 CCLNLGK---ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TW 408
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEM 568
+++ Y L L+ + + Y+EM
Sbjct: 409 NSMIS--------------GYSLSGLQHRALSCYLEM 431
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 320/644 (49%), Gaps = 71/644 (11%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAK 66
PR+ + I +WN I + AL +F M +++ + N + ++ +
Sbjct: 42 PRV----KDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFN 97
Query: 67 LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
L+ L+ QM D+F M+ Y + RL A +LFD MP++DV SWN++
Sbjct: 98 LARNLFDQMPE---------RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSL 148
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGI 182
+ G+AQ G++++ +F NM + + ++ GL A +H + L +S + +
Sbjct: 149 LSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL 204
Query: 183 --------------HIGVDA----------DVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+G DA D NT IS YA+ L A +F E
Sbjct: 205 ISWNCLMGGFVRKKKLG-DARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD--ES 261
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R V +W +++ G D++ F+ M P+ V A++ G
Sbjct: 262 PTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM------PEKNEV--------SYNAMIAG- 306
Query: 279 LVHSHGIHYGFDL-------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
V + + +L ++S NT+I+ Y + GDI AR FD M R VSW A+I
Sbjct: 307 YVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAII 366
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
+GYAQ G +EAL +F ++ GE + T +S C ALELGK A G
Sbjct: 367 AGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYG 426
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
V NAL+ MY KCGSI +A + F + EK VVSW TM+AG A +G +AL +F M
Sbjct: 427 TGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESM 486
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
++P+ +T + VL AC+H G L++G YF MTK Y V P HY+CM DLLGR G+
Sbjct: 487 KTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANI 571
L+EA D +++MP + A WG LL A +IH N E+GE A +F++EP ++ YV ++N+
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL 606
Query: 572 YALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YA GRW +R+ M+ V+K PG S V + K TF+V D
Sbjct: 607 YAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGD 650
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 38/147 (25%)
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
L + G L+ G YF M + Y V P HY+CM DLLGR +L+E
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE------------ 818
Query: 527 DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRT 586
G LL A +IH N E+GE A F++ P ++ G++ +R
Sbjct: 819 -----GALLGASRIHGNTELGEKAAQMFFKMGPQNS-----------------GISKMRD 856
Query: 587 MMKRNQVKKFPGQSLVHINGKTCTFTV 613
+ V+K PG S + K TF+V
Sbjct: 857 V----GVQKVPGYSWFEVQNKIHTFSV 879
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 294/553 (53%), Gaps = 5/553 (0%)
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
AK + +H ++ + + F+ +V+MY+KC LD A KLFD MP R++ SW
Sbjct: 16 AKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWT 75
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
AMI G +Q + + F MR+ G +A + + K +H +
Sbjct: 76 AMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKF 135
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G+ +++ V + Y+KC + A VF E + VSW ++I G + +F+++L
Sbjct: 136 GIGSELFVGSNLEDMYSKCGAMFDACKVFE--EMPCKDEVSWTAMIDGYSKIGEFEEALL 193
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
++ MI + D + S L +C +A GR VHS + GF+ D+ V N L MYS
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253
Query: 305 KCGDIDSARFLF--DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
K GD++SA +F D C R VS+T +I GY + +++ L +F + G P+ T
Sbjct: 254 KAGDMESASNVFGIDSEC-RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
S+I C ALE G ++ V + L+DMY KCG + A + F + +
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGD 372
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
T ++W ++++ +G +A+ +F +M++ ++PN +TF+++L C+HAG +E+G Y
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
F M K Y V P HYSC+ DLLGR G+LKEA +F+ MP + +A W + L AC+IH
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ E+G+ A +L +LEP ++ V ++NIYA +W+ V ++R M+ VKK PG S V
Sbjct: 493 DKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWV 552
Query: 603 HINGKTCTFTVED 615
+ KT F ED
Sbjct: 553 DVGYKTHVFGAED 565
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 209/421 (49%), Gaps = 3/421 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I ++ +A+ F M+ P F +ACA L + +H +
Sbjct: 74 WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 133
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S++FV + + DMY+KC + A K+F++MP +D SW AMI G++++G E+ L
Sbjct: 134 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 193
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + D + A K +SVHS + +G ++D+ V N Y+
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K D++ A VF GI+ R VVS+ +I G ++ + L+ + + G P+ T
Sbjct: 254 KAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
SL+ +C AL QG +H+ + FD D V + L+ MY KCG ++ A FD + D
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGD 372
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
T ++W +++S + Q G +A+++F M G P+ +T +S+++GC +G +E G +
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
F + + G+ + +ID+ + G + +A+E +P E W + + C ++G
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492
Query: 440 E 440
+
Sbjct: 493 D 493
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 118/214 (55%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + ++ + + L +G+ +H+ I G+ + N L++MYSKCG++D A LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M R VSWTAMISG +Q EA+R F M GEVP S I C G++E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+GK A G+ + V + L DMYSKCG++ DA ++F +P K VSWT MI G +
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
GEF EAL F +M++ ++ ++ + L AC
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D + +I ++ L GK G + N L++MYSKCG + A +LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+P++ +VSWT MI+G + N +F EA+ F M P + F + ++AC G +E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
G L K + + EL S + D+ + G + +A + MP K + W ++
Sbjct: 124 MGKQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMI 179
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 306/577 (53%), Gaps = 39/577 (6%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY--KLFDKMPDRDVASWNAMIVGFAQM 133
IH +K+ S+ T ++ + D Y K+FD++P V WN MI G++++
Sbjct: 54 IHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRI 113
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG-IHIGVDADVSV 192
E + L+ M + I+ D T L + L K + + IH +D+++ V
Sbjct: 114 NCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFV 173
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY- 251
+I ++ C + A +F + +G VV+WN ++ G ++++S + M
Sbjct: 174 QKGFIHLFSLCGLVNYARKIF-DMGDGWE-VVTWNVVLSGYNRFKRYEESKRLFIEMEKK 231
Query: 252 -DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDI 309
+ P+ T+V +LS+C + LV G+ +++ I G + ++ + N LI M++ CG++
Sbjct: 232 CECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEM 291
Query: 310 DSARFLFD-------------------------------GMCDRTRVSWTAMISGYAQKG 338
D+AR +FD M +R VSWTAMI GY +
Sbjct: 292 DAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMN 351
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
E L LF M+ + PD T++S+++ C GALELG+W Y +K++ + N
Sbjct: 352 RFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGN 411
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
ALIDMY KCG++ A+++F + +K +WT MI G A NG EAL +F M+E + P
Sbjct: 412 ALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTP 471
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ +T++ V+ ACTH G + KG +F+ M + + P L HY CM DLLGR G LKEAL+
Sbjct: 472 DEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEV 531
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+ +MP+K ++ +WG+LL AC++H+N+++ E A + ELEP + A YV + NIYA +W
Sbjct: 532 IMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKW 591
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ N+R MM +KK PG SL+ +NG F D
Sbjct: 592 KNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGD 628
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 222/471 (47%), Gaps = 39/471 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I+ N + + L++ M ++I+P+ TFPF+ K K Y +++ H V
Sbjct: 103 WNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAV 162
Query: 82 KSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
F S++FVQ + +++ C ++ A K+FD +V +WN ++ G+ + E+
Sbjct: 163 IHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESK 222
Query: 141 CLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 197
LF M + + + VT++ + A K L K +++ I G V+ ++ + N I
Sbjct: 223 RLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALI 282
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT----------YGD---------- 237
+A C ++ A VF E R V+SW SI+ G Y D
Sbjct: 283 DMFASCGEMDAARGVFD--EMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSW 340
Query: 238 -----------KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
+F + L +R M +PD T+VS+L++C AL G ++
Sbjct: 341 TAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDK 400
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
D + N LI MY KCG+++ A+ +F+ M + + +WTAMI G A G +EAL +
Sbjct: 401 NKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTM 460
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYS 405
F M A PD +T + ++ C G + GK +F N A G+K N+ ++D+
Sbjct: 461 FSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLG 520
Query: 406 KCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ G + +A E+ +P K + W +++ C ++ A ++++EL+
Sbjct: 521 RAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELE 571
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/568 (34%), Positives = 297/568 (52%), Gaps = 43/568 (7%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
+PN+L I+ L DF YS +I HI P + YA
Sbjct: 51 KPNHLLSQSIS-----LKDFTYSTLIFSHITPHP------------NDYA---------- 83
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
F+ M +W+ + L L++ M+ + I + T + A + +
Sbjct: 84 -FNIMLRATTTTWHDYPL----------TLHLYHQMKTLNISPNNFTFPFVFLACANLEE 132
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ + + H +G+D D N+ ++ Y +C + +A VF I E + +VSWNS++
Sbjct: 133 IRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITE--KDLVSWNSLL 190
Query: 231 GG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
G G + F R GF PD ++VS+L +C L GR V + G
Sbjct: 191 SGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGM 250
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
++ + + LISMYSKCG++ S+R +FDGM R ++W A IS YAQ G DEA+ LF +
Sbjct: 251 KVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHS 310
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M+ G P+ VT+ +++S C GAL+LGK D YA GL+ ++ V ALIDMY+KCGS
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGS 370
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL--DLRPNRVTFLAVL 467
+ A+ +F +P K SW MI+ A +G+ EAL LF +M + RPN +TF+++L
Sbjct: 371 LESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLL 430
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC HAG +++G+ F++M+ ++ + P++ HYSCM DLL R G L EA D ++ MP K D
Sbjct: 431 SACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPD 490
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTM 587
G L AC+ +N++IGE V L EL+P ++ Y+ + IY WD A +R +
Sbjct: 491 NVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRAL 550
Query: 588 MKRNQVKKFPGQSLVHINGKTCTFTVED 615
M+ N V K PG S + + + F D
Sbjct: 551 MRENGVTKTPGCSWIEVGNQLREFLSGD 578
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 208/390 (53%), Gaps = 6/390 (1%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
L L+ +MK +I PNN TFPF+ ACA L + +++ H + K +D +MV
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR-LVGIQADFV 156
MY +C A K+FD++ ++D+ SWN+++ G+A++GF + + +F +R G + D +
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+++ + A L L + V F + G+ + + + IS Y+KC +L + +F G+
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R ++WN+ I D++++ + M +G P+ T+ ++LS+C AL
Sbjct: 281 PS--RDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ + + H G D+ V LI MY+KCG ++SA+ +F+ M + SW AMIS A
Sbjct: 339 GKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALAS 398
Query: 337 KGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 393
G EAL LF M E P+ +T +S++S C +G ++ G + FD + GL
Sbjct: 399 HGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 458
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ + ++D+ S+ G + +A ++ +PEK
Sbjct: 459 IEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 163/331 (49%), Gaps = 7/331 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS + A +A+ +F R+++ EP+ ++ + AC +L D + + G +
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + ++ + ++ MY+KC L + ++FD MP RD +WNA I +AQ G ++ +
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF++M+ G+ + VT+ + A L L K + + H G+ D+ V I Y
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMY 365
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDV 258
AKC L+ A+ VF + + SWN++I K ++L+ + M +G RP+
Sbjct: 366 AKCGSLESAQRVFNDMPR--KNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPND 423
Query: 259 TTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T VSLLS+CV + +G RL +G + + ++ + S+ G + A + +
Sbjct: 424 ITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIE 483
Query: 318 GMCDRT-RVSWTAMISGYAQKGDLDEALRLF 347
M ++ V+ A+ S +K ++D R+
Sbjct: 484 KMPEKPDNVTLGALHSACQRKKNVDIGERVI 514
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 315/568 (55%), Gaps = 13/568 (2%)
Query: 44 RMKKNDIEPNNLTFPFIAKACAKLSD--FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
+M + + + +T+ + C + + FL +H IVK F ++FV ++ MY++
Sbjct: 152 KMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSR 211
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE-KVLCLFYNMRLVGIQADFVTVMG 160
L A ++F++M RD+ SWNAMI G++Q G + + +F M G++ D ++
Sbjct: 212 WGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTS 271
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
A + K+L L + +H I + V+V N IS Y KC ++ A LVF+ + E
Sbjct: 272 AVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNE-- 329
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R VVSW ++I ++++F+ M DG P+ T V L+ + E +VQG++V
Sbjct: 330 RNVVSWTTMIS-----IDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMV 384
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H GF +V N++I+MY+K + + +F + + ++W A+ISG+ G
Sbjct: 385 HGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLC 444
Query: 341 DEALRLFFA--MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
EA+R FF+ +E+ ++L+ I G + +L+ G+ + GL + +V +
Sbjct: 445 QEAIRAFFSGLIESKPNQYSFGSILNAI-GAAEDVSLKYGQRCHSQIIKLGLNTDPIVSS 503
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+DMY+K GSI +++++F P+++ +WTT+I+ A +G++ ++ F +M L++RP
Sbjct: 504 ALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRP 563
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ +TFL++L AC G ++ G F M K YQ+ P HYSC+ D+LGR G+L+EA
Sbjct: 564 DSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERL 623
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+ +P + +LL AC++H N+++GE VA L E+EP + YV M+N+YA G+W
Sbjct: 624 MSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADALMEMEPTESGSYVLMSNLYAEIGKW 683
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHING 606
+ VA +R M+ VKK G S V + G
Sbjct: 684 EMVAKVRKRMRVKGVKKEVGFSWVDVGG 711
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 228/506 (45%), Gaps = 20/506 (3%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
KAC L IHG + F + V ++++MY K + A +F+ + D+
Sbjct: 74 KACRGYP--LLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIV 131
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
SWN ++ G C + +V + TV+ + A L L+ +HS
Sbjct: 132 SWNTVLSGCQTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQ-LHSCI 190
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD- 240
+ G D +V V N IS Y++ L A VF E R +VSWN++I G + +
Sbjct: 191 VKFGFDCEVFVGNALISMYSRWGHLVEARRVFE--EMKTRDLVSWNAMISGYSQEGIYGL 248
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++++ + M G D + S +S+C + L R +H I + V+V N LI
Sbjct: 249 EAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLI 308
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
S Y KC I+ AR +F M +R VSWT MIS D EA+ F M G P+ V
Sbjct: 309 STYFKCQVIEDARLVFQNMNERNVVSWTTMIS-----IDEAEAVSFFNEMRLDGVYPNDV 363
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T + +I + GK + G VCN++I MY+K S+ D+ ++F L
Sbjct: 364 TFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQEL 423
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+ +++W +I+G NG EA+ F + ++ +PN+ +F ++L A A + +
Sbjct: 424 KYQDIIAWNALISGFVHNGLCQEAIRAFFSGL-IESKPNQYSFGSILNAIGAAEDVSLKY 482
Query: 481 G---YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
G + ++ +P ++ S + D+ ++G + E+ P +S W T++ A
Sbjct: 483 GQRCHSQIIKLGLNTDPIVS--SALLDMYAKRGSICESQKVFVETPQQSQFA-WTTIISA 539
Query: 538 CKIHRNIE--IGEYVAYRLFELEPHS 561
H + E + + R E+ P S
Sbjct: 540 YARHGDYESVMNWFEEMRRLEVRPDS 565
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 207/424 (48%), Gaps = 14/424 (3%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ +F +M + +E + ++F AC + ++ IHG +K+ + V ++
Sbjct: 249 EAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLI 308
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
Y KC ++ A +F M +R+V SW MI + E V F MRL G+ + V
Sbjct: 309 STYFKCQVIEDARLVFQNMNERNVVSWTTMI----SIDEAEAV-SFFNEMRLDGVYPNDV 363
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T +GL A + + K VH F G + +VCN+ I+ YAK ++ + VF+
Sbjct: 364 TFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQ-- 421
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLN-FYRHMIYDGFRPDVTTVVSLLSSCVCPE--A 273
E + +++WN++I G + +++ F+ +I +P+ + S+L++ E +
Sbjct: 422 ELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIES--KPNQYSFGSILNAIGAAEDVS 479
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
L G+ HS I G + D V + L+ MY+K G I ++ +F +++ +WT +IS
Sbjct: 480 LKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISA 539
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKD 392
YA+ GD + + F M PD +T LS+++ CG+ G +++G F + ++
Sbjct: 540 YARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEP 599
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQM 451
+ + L+DM + G + +A L +P +S +++ C ++G + +
Sbjct: 600 SAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADAL 659
Query: 452 MELD 455
ME++
Sbjct: 660 MEME 663
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 161/365 (44%), Gaps = 53/365 (14%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I ++D+ EA + F M+ + + PN++TF + A + +M+HG
Sbjct: 335 WTTMI--SIDEAEA---VSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCT 389
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F S V +++ MYAK + + K+F ++ +D+ +WNA+I GF G ++ +
Sbjct: 390 KTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIR 449
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISA 199
F++ L+ + + + + A A+ +SL + HS I +G++ D V + +
Sbjct: 450 AFFS-GLIESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDM 508
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAK + ++ VF +E ++ +W +II ++ +N++ M RPD
Sbjct: 509 YAKRGSICESQKVF--VETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSI 566
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T +S+L++C GR G +D LF M
Sbjct: 567 TFLSILTAC--------GRR---------------------------GMVDMGCHLFGSM 591
Query: 320 CDRTRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
++ ++ ++ + G L+EA RL + P L + S++ C G
Sbjct: 592 VKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGG---PGLSVLQSLLGACRVHGN 648
Query: 375 LELGK 379
+++G+
Sbjct: 649 VDMGE 653
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D TV + + C G LG ++ + +V N+L++MY K G A +F
Sbjct: 65 DEFTVANALKAC--RGYPLLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIF 122
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
L +VSW T+++GC + +A +M + + VT+ VL C
Sbjct: 123 ENLTHPDIVSWNTVLSGCQTSE---DAFSFACKMNSSGVVFDAVTYTTVLSFC 172
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 320/644 (49%), Gaps = 71/644 (11%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAK 66
PR+ + I +WN I + AL +F M +++ + N + ++ +
Sbjct: 42 PRV----KDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFN 97
Query: 67 LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
L+ L+ QM D+F M+ Y + RL A +LFD MP++DV SWN++
Sbjct: 98 LARNLFDQMPE---------RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSL 148
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGI 182
+ G+AQ G++++ +F NM + + ++ GL A +H + L +S + +
Sbjct: 149 LSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL 204
Query: 183 --------------HIGVDA----------DVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+G DA D NT IS YA+ L A +F E
Sbjct: 205 ISWNCLMGGFVRKKKLG-DARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD--ES 261
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R V +W +++ G D++ F+ M P+ V A++ G
Sbjct: 262 PTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM------PEKNEV--------SYNAMIAG- 306
Query: 279 LVHSHGIHYGFDL-------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
V + + +L ++S NT+I+ Y + GDI AR FD M R VSW A+I
Sbjct: 307 YVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAII 366
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
+GYAQ G +EAL +F ++ GE + T +S C ALELGK A G
Sbjct: 367 AGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYG 426
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
V NAL+ MY KCGSI +A + F + EK VVSW TM+AG A +G +AL +F M
Sbjct: 427 TGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESM 486
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
++P+ +T + VL AC+H G L++G YF MTK Y V P HY+CM DLLGR G+
Sbjct: 487 KTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANI 571
L+EA D +++MP + A WG LL A +IH N E+GE A +F++EP ++ YV ++N+
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL 606
Query: 572 YALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YA GRW +R+ M+ V+K PG S V + K TF+V D
Sbjct: 607 YAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGD 650
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 290/537 (54%), Gaps = 29/537 (5%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A ++FD++P D + I ++++ + L F +M ++ T+ + ++
Sbjct: 49 ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCAS 108
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI----------- 216
+ + K VHS I G + V N I+ YAK NDL AEL+F GI
Sbjct: 109 LLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168
Query: 217 -------EEGL-----------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
E L R++VSWN++I + ++ M + P+
Sbjct: 169 ISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNE 228
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ ++LS C L G + + ++ V ++ MY KCG +D R +FD
Sbjct: 229 ITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH 288
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R V+W+AMI+GYAQ G +EAL LF M++A P+ VT++S++S C Q G++E G
Sbjct: 289 MARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG 348
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ +Y S GL NV V +AL+ MYSKCG+I AR++F LP++ V+W +MI G A+N
Sbjct: 349 ERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAIN 408
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +A+ L+++M E++++PN +TF+ ++ ACTHAG +E G +F M + ++P + H
Sbjct: 409 GFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEH 468
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
++C+ DL R G+L +A +F+ M ++ + IWGTLL A +IH N+E+ E +L ELE
Sbjct: 469 FACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELE 528
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P ++ YV ++NIYA GRW +R +MK +V+K S V + + F V D
Sbjct: 529 PDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGD 585
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 209/443 (47%), Gaps = 37/443 (8%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
++AL F M +N++ T P I K+CA L + +H +++ F S +F Q +
Sbjct: 78 NEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNAL 137
Query: 96 VDMYAKCDRL------------------DC-------------AYKLFDKMPDRDVASWN 124
++ YAK + L +C A +LFDKM DR + SWN
Sbjct: 138 INFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWN 197
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
AMI +AQ G K +F M+ + + +T+ + L + + +
Sbjct: 198 AMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNK 257
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
+ +++ V + Y KC + LVF + R VV+W+++I G + +++L
Sbjct: 258 NLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMAR--RDVVTWSAMIAGYAQNGRSNEALE 315
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+ +M +P+ T+VS+LS+C ++ G + S+ G +V V + L+ MYS
Sbjct: 316 LFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYS 375
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCG+I AR +FD + R V+W +MI G A G ++A+ L+ M+ P+ +T +
Sbjct: 376 KCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVG 435
Query: 365 MISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-E 422
+++ C +G +ELG ++F + + N+ ++D++ + G + DA E + E
Sbjct: 436 LMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVE 495
Query: 423 KTVVSWTTMIAGCA--LNGEFVE 443
VV W T+++ LN E E
Sbjct: 496 PNVVIWGTLLSASRIHLNVELAE 518
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 149/321 (46%), Gaps = 4/321 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R +I WN+ I + HK ++F+RM+ EPN +T + CAKL D
Sbjct: 189 RDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGL 248
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
I S++ V T M++MY KC +D +FD M RDV +W+AMI G+AQ G
Sbjct: 249 RIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNG 308
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L LF NM+ I+ + VT++ + A + + + S+ G+ ++V V +
Sbjct: 309 RSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVAS 368
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ Y+KC ++ A +F + + R V+WNS+I G +D++ Y M
Sbjct: 369 ALLGMYSKCGNIIKARQIFDKLPQ--RDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEV 426
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSA 312
+P+ T V L+++C + G S + ++ ++ ++ + G ID+
Sbjct: 427 KPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAY 486
Query: 313 RFLFDGMCDRTRVSWTAMISG 333
F+ + V W ++S
Sbjct: 487 EFICRMEVEPNVVIWGTLLSA 507
>gi|297736974|emb|CBI26175.3| unnamed protein product [Vitis vinifera]
Length = 619
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 297/582 (51%), Gaps = 50/582 (8%)
Query: 55 LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC------------ 102
LT K+C+ L Q IH + KS S+IFV+ +++ Y KC
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 103 -------------------DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF 143
LD A LF+KMP + S+ M++G AQ + + +F
Sbjct: 113 CSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVF 172
Query: 144 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC 203
+MR G+ + VT+ + A H + + +H+ +G++A V + Y C
Sbjct: 173 KDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVC 232
Query: 204 NDL-KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
+ L +A +F I + VVSW +II G ++ ++L YR M+ G P+ +V
Sbjct: 233 SRLVDLARDLFERIPA--KDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIV 290
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
L+S+C A+ +G+ H + GFD + T+I Y+ CG+I+ A F+
Sbjct: 291 DLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKD 350
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
SW A+ISG+ + G +++A +LF M D+ + SMIS G+W
Sbjct: 351 HVSSWNALISGFVRNGMIEQARQLFDEMPER----DVFSWSSMIS----------GRWAH 396
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK--TVVSWTTMIAGCALNGE 440
Y S + N + ALIDMY+KCGSI A +LFY + ++ +V W +I G A++G
Sbjct: 397 EYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGH 456
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+L LF Q+ + ++PN +TF+ VL AC HAG ++ G YF M +Y + P + HY
Sbjct: 457 ANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYG 516
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G+LKEA + ++ MP+K+D IWGTLL AC+ H N+EIGE A L +L+
Sbjct: 517 CMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDIS 576
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
A V ++NIYA GRWD +R M+ ++KK PG S V
Sbjct: 577 HGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 618
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 195/410 (47%), Gaps = 23/410 (5%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ +F+ M+ + PN +T + A + + L +M+H K + V T +V
Sbjct: 167 EAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLV 226
Query: 97 DMYAKCDRL-DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
MY C RL D A LF+++P +DV SW +I G+ Q+ L + L ++ +M G+ +
Sbjct: 227 HMYCVCSRLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNE 286
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
V ++ L A +S + H + G D + T I YA C ++ +A L F
Sbjct: 287 VMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQF-- 344
Query: 216 IEEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
E G + V SWN++I G + + + M DV + S++S
Sbjct: 345 -ELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMP----ERDVFSWSSMIS-------- 391
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR-TRVS-WTAMIS 332
GR H + + L+ ++ LI MY+KCG I A LF + DR + VS W A+I
Sbjct: 392 --GRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIIC 449
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLK 391
G A G + +L+LF ++ P+ +T + ++S C +G ++ G K+F ++
Sbjct: 450 GLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIE 509
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNGE 440
N+ +ID+ + G + +A E+ +P K VV W T++A C +G
Sbjct: 510 PNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGN 559
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 140/327 (42%), Gaps = 18/327 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V +AL ++R M + + PN + + AC + Q HG IV
Sbjct: 254 WGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIV 313
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F F+Q T++ YA C ++ A+ F+ V+SWNA+I GF + G +E+
Sbjct: 314 RTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQ 373
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M + D + + + H + + + + ++ I YA
Sbjct: 374 LFDEMP----ERDVFSWSSMISG----------RWAHEYILSNSIPLNDNLNAALIDMYA 419
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + +A +F I++ + +V WN+II G + SL + + +P+ T
Sbjct: 420 KCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITF 479
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ +LS+C C LV + G+ Y + ++ +I + + G + A + M
Sbjct: 480 IGVLSAC-CHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKM 538
Query: 320 CDRTRVS-WTAMISGYAQKGDLDEALR 345
+ V W +++ G+++ R
Sbjct: 539 PMKADVVIWGTLLAACRTHGNVEIGER 565
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC--AKLSDFLY 72
R S+++ WN+ I A+ +L LF ++++ I+PN++TF + AC A L D
Sbjct: 437 RVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVD-TG 495
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFA 131
+ G +I M+D+ + RL A ++ KMP + DV W ++
Sbjct: 496 EKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACR 555
Query: 132 QMGFLE 137
G +E
Sbjct: 556 THGNVE 561
>gi|147836510|emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 194/577 (33%), Positives = 300/577 (51%), Gaps = 28/577 (4%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
++LT + +CA D IH +I+KS +++FV +++DMYAKC R++ A KLF
Sbjct: 41 DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D MPD+ V SW +M+ G Q G ++V+ +F+ M L +Q + T+ + QA + L
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM-LETLQPNEYTLAVILQACAQKRDLK 159
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L++ +H I G D + N+ I Y K L AE + + + R VVSW S+I G
Sbjct: 160 LVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLI--CRDVVSWTSVISG 217
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPD--------VTTVVSLLSSCVCPEALVQGRLVHSHG 284
C + +L F+ M DG P+ T+ +LL C + L G +H +
Sbjct: 218 CVLNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQ 277
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
I +GF V N+LI MY++ D+A LF M R VSW MIS + +AL
Sbjct: 278 IKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQAL 337
Query: 345 RLFFAMEAAGE----VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
L + + G PD VT+L+ I C +L+LG+ Y GL ++ V N+L
Sbjct: 338 MLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSL 397
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL-RPN 459
+DMY KCG + A ++ +P + + SW ++IA +NG + AL++F Q+ RPN
Sbjct: 398 VDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPN 457
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TF +L AC HAG + +G+ F M + Y + P + H++CM EA F+
Sbjct: 458 AITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACMR---------PEA--FI 506
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
Q MP + +WG LL C + N++I E VA +L LEP S A V ++N+YA +W+
Sbjct: 507 QKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLXILEPKSRAWRVALSNVYASVNKWE 566
Query: 580 GVANLRTMMKRN-QVKKFPGQSLVHINGKTCTFTVED 615
A +R M+R+ +++K G S V + G+ F V D
Sbjct: 567 DAAKVRAEMRRSEELQKEGGWSSVEVRGZEFRFMVGD 603
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 179/374 (47%), Gaps = 16/374 (4%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W S + + + + +F RM + ++PN T I +ACA+ D Q+IH
Sbjct: 107 TVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQKRDLKLVQLIH 165
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
HI+K+ F D F+Q +++D Y K L A KL ++ RDV SW ++I G G +E
Sbjct: 166 CHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVE 225
Query: 138 KVLCLFYNMRLVGIQAD--------FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
K L F+ M+ G+ + T+ L Q H+K L L + +H + I G
Sbjct: 226 KALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPC 285
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V N+ I YA+ A +FR + R +VSWN++I G +L +
Sbjct: 286 TIVENSLIYMYAENERDDAAFQLFRKM--SCRDIVSWNTMISSLVKGSSSYQALMLLSEV 343
Query: 250 IYDG----FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+G PD T+++ + +C +L G+++H + G D+ V N+L+ MY K
Sbjct: 344 HSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGK 403
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLS 364
CG + A + + M R SW ++I+ Y G+ AL +F ++ G P+ +T +
Sbjct: 404 CGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTN 463
Query: 365 MISGCGQSGALELG 378
++S C +G + G
Sbjct: 464 ILSACAHAGLVAEG 477
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 200/403 (49%), Gaps = 17/403 (4%)
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+D +T + + + + L L +H+ + G+ +V V N+ + YAKC ++ A +
Sbjct: 40 SDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKL 99
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + +TVVSW S++ G FD+ ++ + M+ + +P+ T+ +L +C
Sbjct: 100 FDHMPD--KTVVSWTSMMSGHCQRGAFDEVISIFWRML-ETLQPNEYTLAVILQACAQKR 156
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
L +L+H H I GF +D + N+LI Y+K G + +A L + R VSWT++IS
Sbjct: 157 DLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVIS 216
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPD--------LVTVLSMISGCGQSGALELGKWFDNY 384
G G +++AL FF M+ G P+ T+ +++ GC S L+LG+ Y
Sbjct: 217 GCVLNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGY 276
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
G +V N+LI MY++ A +LF + + +VSW TMI+ +A
Sbjct: 277 QIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQA 336
Query: 445 LDLFHQMMELD----LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
L L ++ + P+ VT LA +QAC+ L+ G +T+ + ++ +
Sbjct: 337 LMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLIC-DIFVQN 395
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
+ D+ G+ G+L A + MP++ D G W +L+ A I+ N
Sbjct: 396 SLVDMYGKCGRLHLAEKVSEEMPVR-DLGSWNSLIAAYGINGN 437
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 191/595 (32%), Positives = 309/595 (51%), Gaps = 3/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I +AL ++ +K + I P++ T + A L Q +HG
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFA 233
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS S + V +V MY K R A ++FD+M RD S+N MI G+ ++ +E+ +
Sbjct: 234 LKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV 293
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F L + D +TV + +A H + LSL K ++++ + G + +V N I Y
Sbjct: 294 RMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVY 352
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC D+ A VF +E + VSWNSII G +++ ++ M+ + D T
Sbjct: 353 AKCGDMITARDVFNSME--CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ L+S L G+ +HS+GI G +D+SV N LI MY+KCG++ + +F M
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
V+W +IS + GD L++ M + VPD+ T L + C A LGK
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G + + + NALI+MYSKCG + ++ +F + + VV+WT MI + GE
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+AL+ F M + + P+ V F+A++ AC+H+G +++G F M Y+++P + HY+
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R K+ +A +F+Q+MPIK DA IW ++L AC+ ++E E V+ R+ EL P
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +N YA +WD V+ +R +K + K PG S + + F+ D
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGD 765
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 258/468 (55%), Gaps = 4/468 (0%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
ASSL ++ + + WNS IR +AL + +++++ + P+ TFP + K
Sbjct: 56 ASSLSV-FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIK 114
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
ACA L D +++ I+ F SD+FV +VDMY++ L A ++FD+MP RD+ S
Sbjct: 115 ACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS 174
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
WN++I G++ G+ E+ L +++ ++ I D TV + A + + + +H F +
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
GV++ V V N ++ Y K A VF E +R VS+N++I G + ++S
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD--EMDVRDSVSYNTMICGYLKLEMVEES 292
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
+ + + D F+PD+ TV S+L +C L + ++++ + GF L+ +V N LI +
Sbjct: 293 VRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDV 351
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+KCGD+ +AR +F+ M + VSW ++ISGY Q GDL EA++LF M E D +T
Sbjct: 352 YAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
L +IS + L+ GK + G+ ++ V NALIDMY+KCG +GD+ ++F ++
Sbjct: 412 LMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT 471
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
V+W T+I+ C G+F L + QM + ++ P+ TFL L C
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 242/488 (49%), Gaps = 8/488 (1%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
++ PFI++A + S+ + IH ++ S F ++D Y+ + +F
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 113 DKM-PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
++ P ++V WN++I F++ G + L + +R + D T + +A
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ V+ + +G ++D+ V N + Y++ L A VF E +R +VSWNS+I
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFD--EMPVRDLVSWNSLIS 180
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + ++++L Y + PD TV S+L + + QG+ +H + G +
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
V V N L++MY K AR +FD M R VS+ MI GY + ++E++R+F +E
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LE 298
Query: 352 AAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ PDL+TV S++ CG L L K+ NY G V N LID+Y+KCG +
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
AR++F ++ K VSW ++I+G +G+ +EA+ LF MM ++ + + +T+L ++
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
T L+ G G + K + +L+ + + D+ + G++ ++L SM D
Sbjct: 419 TRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVT 476
Query: 531 WGTLLCAC 538
W T++ AC
Sbjct: 477 WNTVISAC 484
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 194/568 (34%), Positives = 297/568 (52%), Gaps = 43/568 (7%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
+PN+L I+ L DF YS +I HI P + YA
Sbjct: 51 KPNHLLSQSIS-----LKDFTYSTLIFSHITPHP------------NDYA---------- 83
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
F+ M +W+ + L L++ M+ + I + T + A + +
Sbjct: 84 -FNIMLRATTTTWHDYPL----------TLHLYHQMKTLNISPNNFTFPFVFLACANLEE 132
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ + + H +G+D D N+ ++ Y +C + +A VF I E + +VSWNS++
Sbjct: 133 IRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITE--KDLVSWNSLL 190
Query: 231 GG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
G G + F R GF PD ++VS+L +C L GR V + G
Sbjct: 191 SGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGM 250
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
++ + + LISMYSKCG++ S+R +FDGM R ++W A IS YAQ G DEA+ LF +
Sbjct: 251 KVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHS 310
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M+ G P+ VT+ +++S C GAL+LGK D YA GL+ ++ V ALIDMY+KCGS
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGS 370
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL--DLRPNRVTFLAVL 467
+ A+ +F +P K SW MI+ A +G+ EAL LF +M + RPN +TF+++L
Sbjct: 371 LESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLL 430
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC HAG +++G+ F++M+ ++ + P++ HYSCM DLL R G L EA D ++ MP K D
Sbjct: 431 SACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPD 490
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTM 587
G L AC+ +N++IGE V L EL+P ++ Y+ + IY WD A +R +
Sbjct: 491 NVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRAL 550
Query: 588 MKRNQVKKFPGQSLVHINGKTCTFTVED 615
M+ N V K PG S + + + F D
Sbjct: 551 MRENGVTKTPGCSWIEVGNQLREFLSGD 578
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 208/390 (53%), Gaps = 6/390 (1%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
L L+ +MK +I PNN TFPF+ ACA L + +++ H + K +D +MV
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR-LVGIQADFV 156
MY +C A K+FD++ ++D+ SWN+++ G+A++GF + + +F +R G + D +
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+++ + A L L + V F + G+ + + + IS Y+KC +L + +F G+
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R ++WN+ I D++++ + M +G P+ T+ ++LS+C AL
Sbjct: 281 PS--RDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ + + H G D+ V LI MY+KCG ++SA+ +F+ M + SW AMIS A
Sbjct: 339 GKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALAS 398
Query: 337 KGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 393
G EAL LF M E P+ +T +S++S C +G ++ G + FD + GL
Sbjct: 399 HGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 458
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ + ++D+ S+ G + +A ++ +PEK
Sbjct: 459 IEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 163/330 (49%), Gaps = 7/330 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS + A +A+ +F R+++ EP+ ++ + AC +L D + + G +
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + ++ + ++ MY+KC L + ++FD MP RD +WNA I +AQ G ++ +
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF++M+ G+ + VT+ + A L L K + + H G+ D+ V I Y
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMY 365
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDV 258
AKC L+ A+ VF + + SWN++I K ++L+ + M +G RP+
Sbjct: 366 AKCGSLESAQRVFNDMPR--KNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPND 423
Query: 259 TTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T VSLLS+CV + +G RL +G + + ++ + S+ G + A + +
Sbjct: 424 ITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIE 483
Query: 318 GMCDRT-RVSWTAMISGYAQKGDLDEALRL 346
M ++ V+ A+ S +K ++D R+
Sbjct: 484 KMPEKPDNVTLGALHSACQRKKNVDIGERV 513
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 191/611 (31%), Positives = 302/611 (49%), Gaps = 62/611 (10%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
++T + + E V NE ++A L M+ + +P + FL++Q+
Sbjct: 19 TATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTD--------------SFLHNQL 64
Query: 76 IH-----------GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
+H ++ D F ++ YAK + FD+MP RD S+N
Sbjct: 65 LHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYN 124
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
I GF+ ++ L LF M+ G + T++ + A+ L K +H I
Sbjct: 125 TTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVR 184
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
+V + N YAKC +++ A +F + + + +VSWN +I G + + +
Sbjct: 185 NFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTK--KNLVSWNLMISGYAKNGQPEKCIG 242
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
M G PD T ++T+I+ Y
Sbjct: 243 LLHQMRLSGHMPDQVT-----------------------------------MSTIIAAYC 267
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
+CG +D AR +F ++ V WTAM+ GYA+ G ++AL LF M PD T+ S
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++S C + +L G+ + GL +N++V +ALIDMYSKCG I DAR +F +P +
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
VVSW MI GCA NG +AL+LF M++ +P+ VTF+ +L AC H ++E+G YF+
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFD 447
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
++ + + P L+HY+CM +LLGR G++++A+ +++M D IW TLL C +I
Sbjct: 448 SISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDI 507
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
E A LFEL+P A PY+ ++N+YA GRW VA++R +MK VKKF G S + I
Sbjct: 508 VNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEI 567
Query: 605 NGKTCTFTVED 615
+ + FT ED
Sbjct: 568 DNEVHRFTSED 578
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
++ I W + + ALLLF M IEP++ T + +CAKL+ +
Sbjct: 282 FKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG 341
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
Q +HG + + +++ V + ++DMY+KC +D A +F+ MP R+V SWNAMIVG AQ
Sbjct: 342 QAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQN 401
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
G + L LF NM + D VT +G+ A +H
Sbjct: 402 GHDKDALELFENMLQQKFKPDNVTFIGILSACLH 435
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 302/597 (50%), Gaps = 83/597 (13%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I +N +I + +A+ L + K D+E T+ + + CA L + IH
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHS 125
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
I + D + + +V MY C L ++FDK+ + V WN ++ G+A++G
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIG---- 181
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
N R + LSL K + GI
Sbjct: 182 ------NFR---------------------ESLSLFKRMRELGIR--------------- 199
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
++ A +F E G R V+SWNS+I G + L+ + M+ G D+
Sbjct: 200 ------RVESARKLFD--ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDL 251
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+VS+ ++++ N L+ MYSK G+++SA +F+
Sbjct: 252 ATMVSV---------------------------ELTLNNCLLDMYSKSGNLNSAIQVFET 284
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M +R+ VSWT+MI+GYA++G D ++RLF ME P+ +T+ ++ C ALE G
Sbjct: 285 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERG 344
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + G + V NAL+DMY KCG++G AR LF +PEK +VSWT MIAG ++
Sbjct: 345 QEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMH 404
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G EA+ F++M + P+ V+F+++L AC+H+G L++GWG+FN+M + P+ H
Sbjct: 405 GYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEH 464
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ DLL R G L +A F++ MPI+ DA IWG LLC C+I+ ++++ E VA +FELE
Sbjct: 465 YACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELE 524
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + YV +ANIYA +W+ V LR + R ++K PG S + I GK F D
Sbjct: 525 PENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGD 581
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W S I + + ++ LF M+K D+ PN++T I ACA L+ Q IH
Sbjct: 289 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIH 348
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
GHI+++ F D V +VDMY KC L A LFD +P++D+ SW MI G+ G+
Sbjct: 349 GHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGS 408
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + F MR GI+ D V+ + + A H+
Sbjct: 409 EAIAAFNEMRNSGIEPDEVSFISILYACSHS 439
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 321/596 (53%), Gaps = 14/596 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I D N+ AL RMK + + T+ C F + +V
Sbjct: 70 WNT-ILSGFDDNQI--ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVV 126
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG-FLEKVL 140
KS SD+ V + + MY++ A ++FD+MP +D+ SWN+++ G +Q G F + +
Sbjct: 127 KSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAV 186
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M G++ D V+ + H L L + +H I G ++ + V N +S Y
Sbjct: 187 LIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 246
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC L+ + VF + E R VVSW ++I DD+++ + +M DG P+ T
Sbjct: 247 SKCGVLEAVKSVFYQMSE--RNVVSWTTMIS-----SNRDDAVSIFLNMRLDGVYPNEVT 299
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V LL++ C E + +G +H I GF + SV N+ I+MY+K ++ A+ FD +
Sbjct: 300 FVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDIT 359
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG--QSGALELG 378
R +SW AMISG+AQ G EAL++F + A +P+ T S+++ + +++ G
Sbjct: 360 FREIISWNAMISGFAQNGFSHEALKMFLSATAE-TMPNEYTFGSVLNAIAFAEDISVKHG 418
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + GL +V +AL+DMY+K G+I ++ ++F + ++ WT++I+ + +
Sbjct: 419 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSH 478
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+F ++LFH+M++ ++ P+ VTFL+VL AC G ++KG N+M + Y + P H
Sbjct: 479 GDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHEH 538
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
YSCM D+LGR G+LKEA + + +P + ++L +C++H N+++G VA E++
Sbjct: 539 YSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK 598
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
P + YV+M NIYA +WD A +R M++ V K G S + + + T++
Sbjct: 599 PELSGSYVQMYNIYAEKEQWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQ 654
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 229/493 (46%), Gaps = 20/493 (4%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+ +T KAC D IHG F S + V ++ MY K R D A +F
Sbjct: 2 DEVTLCLALKACR--GDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIF 59
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
+ + D DV SWN ++ GF + L M+ G+ D T + ++
Sbjct: 60 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFR 116
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L + S + G+++D+ V N++I+ Y++ + A VF E + ++SWNS++ G
Sbjct: 117 LGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFD--EMPFKDMISWNSLLSG 174
Query: 233 CTYGDKFD-DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ F +++ +R M+ +G D + S++++C L R +H I G++
Sbjct: 175 LSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 234
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+ V N L+S YSKCG +++ + +F M +R VSWT MIS + D+A+ +F M
Sbjct: 235 LLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMIS-----SNRDDAVSIFLNMR 289
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G P+ VT + +++ + ++ G G V N+ I MY+K ++
Sbjct: 290 LDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALE 349
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
DA++ F + + ++SW MI+G A NG EAL +F + PN TF +VL A
Sbjct: 350 DAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATA-ETMPNEYTFGSVLNAIA 408
Query: 472 HAGFLEKGWG---YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
A + G + +L+ P ++ S + D+ ++G + E+ M + +
Sbjct: 409 FAEDISVKHGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNINESEKVFNEMS-QRNQ 465
Query: 529 GIWGTLLCACKIH 541
+W +++ A H
Sbjct: 466 FVWTSIISAYSSH 478
>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 304/585 (51%), Gaps = 8/585 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK--NDIE-PNNLTFPFIAKACAKLSDFLYSQMIHG 78
W + I V E+ L +M +D++ PN T +AC+ L + +HG
Sbjct: 195 WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 254
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
VK+ S FVQ++M Y+K AY F ++ D D+ SW ++I A+ G +E+
Sbjct: 255 FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE 314
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+F+ M+ G+ D V + L + K+ H F I D +VCN+ +S
Sbjct: 315 SFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLS 374
Query: 199 AYAKCNDLKMAELVF-RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y K L +AE +F R EEG + +WN+++ G + +R + G D
Sbjct: 375 MYCKFELLSVAEKLFCRISEEGNKE--AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ S++SSC A++ G+ +H + + DL +SV+N+LI +Y K GD+ A +F
Sbjct: 433 SASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF- 491
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
D ++W AMI+ Y ++A+ LF M + P +T+++++ C +G+LE
Sbjct: 492 CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ Y + N+ + ALIDMY+KCG + +RELF A +K V W MI+G +
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G+ A+ LF QM E D++P TFLA+L ACTHAG +E+G F M + Y V P L
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLK 670
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HYSC+ DLL R G L+EA V SMP D IWGTLL +C H E+G +A R
Sbjct: 671 HYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVAS 730
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+P + Y+ +AN+Y+ G+W+ R MM+ + V K G S+V
Sbjct: 731 DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 253/547 (46%), Gaps = 12/547 (2%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+L R+ + I WNS I+ + ++L F M + P++ T P + AC
Sbjct: 76 NLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSAC 135
Query: 65 AKLSDFLYSQMIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
A+L F +HG ++K F + V + V Y+KC L A +FD+MPDRDV +W
Sbjct: 136 AELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAW 195
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT---QAAIHAKHLSLLKSVHSF 180
A+I G Q G E L M G D L QA + L + +H F
Sbjct: 196 TAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGF 255
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ G+ + V ++ S Y+K + A L FR E G + SW SII +
Sbjct: 256 AVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFR--ELGDEDMFSWTSIIASLARSGDME 313
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+S + + M G PD + L++ + QG+ H I + F LD +V N+L+
Sbjct: 314 ESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLL 373
Query: 301 SMYSKCGDIDSARFLFDGMCDR-TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
SMY K + A LF + + + +W M+ GY + + + LF ++ G D
Sbjct: 374 SMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDS 433
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+ S+IS C GA+ LGK Y L + V N+LID+Y K G + A +F
Sbjct: 434 ASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE 493
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ V++W MIA + +A+ LF +M+ + +P+ +T + +L AC + G LE+G
Sbjct: 494 -ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG 552
Query: 480 WGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+T+ +++N L+ + + D+ + G L+++ + + K DA W ++
Sbjct: 553 QMIHRYITETEHEMNLSLS--AALIDMYAKCGHLEKSRELFDAGNQK-DAVCWNVMISGY 609
Query: 539 KIHRNIE 545
+H ++E
Sbjct: 610 GMHGDVE 616
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 206/441 (46%), Gaps = 8/441 (1%)
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
I+ +IFV + ++ YA + + + ++F + RD+ WN++I G +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWIS 198
LC F++M L G D T + A + VH + H G D + +V +++
Sbjct: 110 LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY 169
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF---R 255
Y+KC L+ A LVF + + R VV+W +II G + + L + M G +
Sbjct: 170 FYSKCGFLQDACLVFDEMPD--RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDK 227
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T+ +C AL +GR +H + G V +++ S YSK G+ A
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + D SWT++I+ A+ GD++E+ +F+ M+ G PD V + +I+ G+ +
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLV 347
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAG 434
GK F + + VCN+L+ MY K + A +LF + E+ +W TM+ G
Sbjct: 348 PQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG 407
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
V+ ++LF ++ L + + + +V+ +C+H G + G + K ++
Sbjct: 408 YGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT-SLDL 466
Query: 495 ELNHYSCMADLLGRKGKLKEA 515
++ + + DL G+ G L A
Sbjct: 467 TISVVNSLIDLYGKMGDLTVA 487
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L+ ++ I G+ ++ V + IS+YA ++ VF + R + WNSII
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTR--RDIFLWNSII 97
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI-HYGF 289
+ SL F+ M+ G PD T ++S+C G VH + H GF
Sbjct: 98 KAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGF 157
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D + +V + + YSKCG + A +FD M DR V+WTA+ISG+ Q G+ + L
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 350 MEAAG---EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
M +AG + P+ T+ C GAL+ G+ +A GL + V +++ YSK
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
G+ +A F L ++ + SWT++IA A +G+ E+ D+F +M + P+ V
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 20/242 (8%)
Query: 357 PDLVTVLSMISG--------------CGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
P+LV L +S C QS +LE + + +GGL +N+ V + LI
Sbjct: 8 PNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLIS 67
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
Y+ G + +F+ + + + W ++I NG++ +L F M+ P+ T
Sbjct: 68 SYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFT 127
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
V+ AC + G L+ K + + + G L++A M
Sbjct: 128 APMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEM 187
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
P + D W + I +++ GE + + HSA V+ N L + +
Sbjct: 188 PDR-DVVAWTAI-----ISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACS 241
Query: 583 NL 584
NL
Sbjct: 242 NL 243
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/605 (29%), Positives = 311/605 (51%), Gaps = 3/605 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+I + W I + + +AL +F +M++ D+ P +T+ I ACA
Sbjct: 64 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
IHG I++ F D+FV T +++MY KC + A+ F ++ RDV SW AMI
Sbjct: 124 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 183
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q L+ M+L G+ + +T+ + A +LS K ++S +++DV
Sbjct: 184 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVR 243
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N+ ++ + L A +F + + R VV+WN +I + F +++ + +
Sbjct: 244 VMNSAMNMFGNAGLLGDARRLFEDMVD--RDVVTWNIVITFYVQNENFGEAVRLFGRLQQ 301
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
DG + + T V +L+ +L +G+++H G+D DV V L+S+Y +C
Sbjct: 302 DGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQ 361
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F M + ++WT M YAQ G EAL+LF M+ G P T+++++ C
Sbjct: 362 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 421
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
AL+ G+ ++ G + ++V ALI+MY KCG + +AR +F + ++ ++ W +M
Sbjct: 422 LAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSM 481
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ A +G + E L LF+QM + + V+F++VL A +H+G + G+ YF M + +
Sbjct: 482 LGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFS 541
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P Y C+ DLLGR G+++EA+D V + D +W TLL AC+ H + +
Sbjct: 542 ITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAA 601
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
A ++ E +P + YV ++N+YA G WDGV +R +M+ VKK PG+S + I +
Sbjct: 602 AEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHE 661
Query: 611 FTVED 615
F D
Sbjct: 662 FLEGD 666
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 242/492 (49%), Gaps = 6/492 (1%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
+P+ F + + C+ + + + +H H+ F + V ++ MYA+C + A +
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+F+ + +DV +W MI + Q G ++ L +FY M+ + VT + + A +
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L +H + G + DV V I+ Y KC ++ A F+ +E R VVSW ++I
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH--RDVVSWTAMI 179
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
C D+F + YR M DG P+ T+ ++ ++ P L +G+ ++S +
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
DV V+N+ ++M+ G + AR LF+ M DR V+W +I+ Y Q + EA+RLF +
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G + +T + M++ +L GK G +V+V AL+ +Y +C +
Sbjct: 300 QQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
G A ++F + K V++WT M A NG EAL LF +M RP T +AVL C
Sbjct: 360 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 419
Query: 471 THAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
H L+KG + +++ +++ E+ + + ++ G+ GK+ EA + M K D
Sbjct: 420 AHLAALQKGRQIHSHIIENGFRM--EMVVETALINMYGKCGKMAEARSVFEKMA-KRDIL 476
Query: 530 IWGTLLCACKIH 541
+W ++L A H
Sbjct: 477 VWNSMLGAYAQH 488
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 152/302 (50%), Gaps = 6/302 (1%)
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
F+PD V+LL C + + GR VH H GF+ + V LI MY++CG + A+
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F+ + + +WT MI Y Q+GD D AL +F+ M+ +P VT +++++ C +
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+L+ G G + +V V ALI+MY+KCGS+ A + F L + VVSWT MIA
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
C + +F A L+ +M + PN++T V A +L +G ++L++ +
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV-ME 239
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
++ + ++ G G L +A + M + D W ++ + N GE A R
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITFYVQNEN--FGE--AVR 294
Query: 554 LF 555
LF
Sbjct: 295 LF 296
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/476 (38%), Positives = 257/476 (53%), Gaps = 33/476 (6%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
LS LK +H+ I DV + IS N L A VF I+ + +NS I
Sbjct: 28 LSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNP--NLFIYNSFI 85
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + D S +FY +G PD T L+ +C +L G H I +GFD
Sbjct: 86 RGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFD 145
Query: 291 LDVSVINTLISMYS-------------------------------KCGDIDSARFLFDGM 319
DV V N+L++MYS K GD+ SAR LFD M
Sbjct: 146 SDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKM 205
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ V+W+ MISGYA+ D+A+ L+F +++ G + ++S+I+ C GALELG+
Sbjct: 206 PEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGE 265
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+Y + N+++ AL+DMY++CGSI A +F LP + +SWTT+IAG A++G
Sbjct: 266 RAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHG 325
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+AL+ F +M + L P +TF AVL AC+H G +E+G F M + Y++ P L HY
Sbjct: 326 YAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHY 385
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
CM DLLGR GKL EA FV MP+K +A IWG LL AC+IH+N EI E L EL+P
Sbjct: 386 GCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKP 445
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++NIYA +W+ V N+R MMK V K PG +L ++GK FT+ D
Sbjct: 446 EHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGD 501
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 33/278 (11%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS IR + K+ + + K+N + P+NLT+PF+ KAC + HG I+
Sbjct: 81 YNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQII 140
Query: 82 KSPFWSDIFVQTTMVDMYAKC----------DRLDC---------------------AYK 110
+ F SD++VQ ++V MY+ R+ C A K
Sbjct: 141 RHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARK 200
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFDKMP++++ +W+ MI G+A+ F +K + L++ ++ G+ A+ ++ + + H
Sbjct: 201 LFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGA 260
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L + H + + + ++ + + YA+C + A VF + R +SW ++I
Sbjct: 261 LELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPG--RDALSWTTLI 318
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
G + +L ++ M G P T ++LS+C
Sbjct: 319 AGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSAC 356
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
KA+ L+ ++ + N + +CA L + H +I+++ ++ + T +V
Sbjct: 228 KAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALV 287
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
DMYA+C +D A +FD++P RD SW +I GFA G+ EK L F M G+ +
Sbjct: 288 DMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREI 347
Query: 157 TVMGLTQAAIHA 168
T + A H
Sbjct: 348 TFTAVLSACSHG 359
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 297/544 (54%), Gaps = 6/544 (1%)
Query: 76 IHGHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H H+ + ++ T + YA C + A +FD++ ++ WN+MI G+A
Sbjct: 44 LHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNN 103
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L L+ M G + D T + +A + + VH+ + G++ DV V N
Sbjct: 104 SPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGN 163
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ +S Y K D++ A +VF + +R + SWN+++ G + + + M DGF
Sbjct: 164 SILSMYFKFGDVEAARVVFDRML--VRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGF 221
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS---VINTLISMYSKCGDIDS 311
D TT+++LLS+C L G+ +H + + G V ++N++I MY C +
Sbjct: 222 VGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSC 281
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR LF+G+ + VSW ++ISGY + GD +AL LF M G VPD VTV+S+++ C Q
Sbjct: 282 ARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQ 341
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
AL LG +Y G NV+V ALI MY+ CGS+ A +F +PEK + + T M
Sbjct: 342 ISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVM 401
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ G ++G EA+ +F++M+ + P+ F AVL AC+H+G +++G F MT+ Y
Sbjct: 402 VTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYS 461
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V P HYSC+ DLLGR G L EA +++M +K + +W LL AC++HRN+++ A
Sbjct: 462 VEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISA 521
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+LFEL P + YV ++NIYA RW+ V N+R ++ + +++K P S V +N F
Sbjct: 522 QKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQF 581
Query: 612 TVED 615
V D
Sbjct: 582 FVGD 585
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 215/442 (48%), Gaps = 13/442 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS IR N +AL L+ +M +P+N T+PF+ KAC L + +H +V
Sbjct: 92 WNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVV 151
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D++V +++ MY K ++ A +FD+M RD+ SWN M+ GF + G
Sbjct: 152 VGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFE 211
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS---VCNTWIS 198
+F +MR G D T++ L A L + K +H + + G V + N+ I
Sbjct: 212 VFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIID 271
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY-GDKFDDSLNFYRHMIYDGFRPD 257
Y C + A +F G+ ++ VVSWNS+I G GD F +L + M+ G PD
Sbjct: 272 MYCNCESVSCARKLFEGLR--VKDVVSWNSLISGYEKCGDAF-QALELFGRMVVVGAVPD 328
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
TV+S+L++C AL G V S+ + G+ ++V V LI MY+ CG + A +FD
Sbjct: 329 EVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFD 388
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M ++ + T M++G+ G EA+ +F+ M G PD +++S C SG ++
Sbjct: 389 EMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDE 448
Query: 378 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIA 433
GK F ++ + L+D+ + G + +A + + P + V WT +++
Sbjct: 449 GKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDV--WTALLS 506
Query: 434 GCALNGEFVEALDLFHQMMELD 455
C L+ A+ ++ EL+
Sbjct: 507 ACRLHRNVKLAVISAQKLFELN 528
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 17/325 (5%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ + V EA A +F M+++ + T + AC + D + IHG
Sbjct: 190 LTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHG 249
Query: 79 HIVKSPFWSDI---FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
++V++ + F+ +++DMY C+ + CA KLF+ + +DV SWN++I G+ + G
Sbjct: 250 YVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGD 309
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M +VG D VTV+ + A L L +V S+ + G +V V
Sbjct: 310 AFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTA 369
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I YA C L A VF + E + + + ++ G + ++++ + M+ G
Sbjct: 370 LIGMYANCGSLVCACRVFDEMPE--KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVT 427
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV------INTLISMYSKCGDI 309
PD ++LS+C + +G+ I Y D SV + L+ + + G +
Sbjct: 428 PDEGIFTAVLSACSHSGLVDEGK-----EIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYL 482
Query: 310 DSARFLFDGMCDRTRVS-WTAMISG 333
D A + + M + WTA++S
Sbjct: 483 DEAYAVIENMKLKPNEDVWTALLSA 507
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WNS I +A +AL LF RM P+ +T + AC ++S
Sbjct: 290 RVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGA 349
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ ++VK + ++ V T ++ MYA C L CA ++FD+MP++++ + M+ GF G
Sbjct: 350 TVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHG 409
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + +FY M G+ D + A H+
Sbjct: 410 RGREAISIFYEMLGKGVTPDEGIFTAVLSACSHS 443
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 292/542 (53%), Gaps = 31/542 (5%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
L A +F + + + SWN MI G A L L+ M +G+ + T L ++
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF----------- 213
+K K +H+ + G+ D+ V + IS YA+ ++ A VF
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 214 ---------RGI---------EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
RG E ++ VVSWN++I G ++ ++L + M+ +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD +T+ ++LS+C + GR +HS ++GF ++ ++N LI +YSKCG+++ A L
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+G+ + +SW +I GYA EAL +F M GE P+ VT+LS++ C GA+
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 376 ELGKWFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
++G+W Y G+ N + +LIDMY+KCG+I A ++F + K++ S MI
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A++G A DL +M + + P+ +TF+ +L AC+HAG + G F MT Y++
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P+L HY CM DLLGR G KEA + + SM ++ D IWG+LL ACKIH+N+E+GE +A +
Sbjct: 448 PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQK 507
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
L ++EP + YV ++NIYA RWD VA +RT++ +KK PG S + I+ F +
Sbjct: 508 LMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLI 567
Query: 614 ED 615
D
Sbjct: 568 GD 569
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 244/486 (50%), Gaps = 38/486 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR ++ AL L+ M + PN+ TFPF+ K+CAK + IH I+
Sbjct: 46 WNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQIL 105
Query: 82 KSPFWSDIFVQTTMVDMYAKC-------------------------------DRLDCAYK 110
K D+ V T+++ MYA+ +D A K
Sbjct: 106 KYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQK 165
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD++P +DV SWNAMI G+A++G ++ L LF M + ++ D T+ + H+ +
Sbjct: 166 MFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGN 225
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + +HS+ + G +++ + N I Y+KC +++ A +F G++ + V+SWN++I
Sbjct: 226 VELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQ--YKDVISWNTLI 283
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG Y + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 284 GGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKG 343
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
+ S+ +LI MY+KCG+I++A +FD + +++ S AMI G+A G D A L
Sbjct: 344 IITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLS 403
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M+ G PD +T + ++S C +G +LG K F + ++ + +ID+ +
Sbjct: 404 RMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRS 463
Query: 408 GSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR-PNRVTFLA 465
G +A EL ++ E V W +++ C ++ + ++M+++ + P L+
Sbjct: 464 GLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLS 523
Query: 466 VLQACT 471
+ A +
Sbjct: 524 NIYATS 529
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 318/601 (52%), Gaps = 12/601 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ WNS + + + AL FR M + + P+ +F A A+ + H
Sbjct: 82 VTSWNSLLN-PLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAH 140
Query: 78 GHIVKSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
K P S+++V T++++MY K + A ++FD MP R+ SW+ M+ G+A
Sbjct: 141 ALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCS 200
Query: 137 EKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSV 192
E+ LF M +++FV L+ ++ L LL + +H + G+ VSV
Sbjct: 201 EEAFDLFRLMLEECPSEKSEFVATAVLSAVSVP---LGLLMGEQMHGLIVKDGLLDFVSV 257
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ ++ YAK + A VF E R ++W+++I G + D +++ + M
Sbjct: 258 ENSLVTMYAKAGCMGAAFHVFESSRE--RNSITWSAMITGYAQNGEADSAVSMFSQMHAA 315
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
GF P T V +L++ AL G+ H + GF++ + V + L+ MY+KCG I A
Sbjct: 316 GFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADA 375
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ FD + + V WTAM+SG+ Q G+ +EAL L+ M+ G +P T+ S + C
Sbjct: 376 KEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGI 435
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
ALE GK GL V +AL MYSKCG++ D +F +P++ V++W ++I
Sbjct: 436 AALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSII 495
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G + NG ALDLF +M P+ +TF+ +L AC+H G +++GW YF+LMTK Y +
Sbjct: 496 SGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGL 555
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P L+HY+CM D+L R G LKEA DF++S+ I +W +L AC+ R+ ++G Y
Sbjct: 556 TPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGE 615
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
RL EL ++ Y+ ++NIYA +W+ V +R +M+ V K PG S V +N + F
Sbjct: 616 RLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFV 675
Query: 613 V 613
V
Sbjct: 676 V 676
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 231/473 (48%), Gaps = 16/473 (3%)
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR--LDCAYKLFDKMPD--RDVASWNAM- 126
+ + +H +KS S V ++++ Y+ R L A+ +FD +P RDV SWN++
Sbjct: 30 HGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLL 89
Query: 127 --IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
+ G + L + + + ++ F AA A + H+ I
Sbjct: 90 NPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAA---FTAAARAASAPAGTAAHALACKI 146
Query: 185 -GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
++V VC + ++ Y K + A VF G+ + R SW++++ G +++
Sbjct: 147 PSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQ--RNSFSWSTMVAGYAAEKCSEEAF 204
Query: 244 NFYRHMIYDGFRPDVTTVVS-LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
+ +R M+ + V + +LS+ P L+ G +H + G VSV N+L++M
Sbjct: 205 DLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 264
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+K G + +A +F+ +R ++W+AMI+GYAQ G+ D A+ +F M AAG P T
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 324
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ +++ GAL +GK G + + V +AL+DMY+KCG I DA+E F L E
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 384
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+V WT M++G NGE EAL L+ +M + + P++ T + L+AC LE G
Sbjct: 385 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 444
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ K Y + S ++ + + G L++ + + +P + D W +++
Sbjct: 445 HTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSII 495
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 200/615 (32%), Positives = 309/615 (50%), Gaps = 85/615 (13%)
Query: 35 AHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQT 93
AH ++ LF+ ++ P + ++ K K + + H +++K D F++
Sbjct: 80 AHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN-----LFHAYVLKLGHIDDHFIRN 134
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
++DMYAK ++D A LF++M +R +A WN+MI G + G + + LF M
Sbjct: 135 AILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA----- 189
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
++ + ++ YAK DL+ A F
Sbjct: 190 ----------------------------------RNIITWTSMVTGYAKMGDLESARRYF 215
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC----- 268
+ E R+VVSWN++ + ++LN + M+ +G PD TT V +SSC
Sbjct: 216 DEMPE--RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGD 273
Query: 269 ---------------VCPEALVQGRLVHSHGIHYGFDLDVSVI------------NTLIS 301
+ + V+ L+ H ++ ++ N +IS
Sbjct: 274 PTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMIS 333
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLV 360
Y++ G + AR LFD M R VSW +MI+GYAQ G+ ++ LF M + ++ PD V
Sbjct: 334 AYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEV 393
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+ S++S CG GAL+L W + +K + N+LI MYSKCGS+ DA +F +
Sbjct: 394 TIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+ VVS+ T+I+G A NG EA+ L M E + P+ VT++ VL AC+HAG L +G
Sbjct: 454 GTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK 513
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
F + P ++HY+CM DLLGR G+L EA +QSMP+K AG++G+LL A +I
Sbjct: 514 NVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRI 568
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H+ + +GE A +LFELEP + YV ++NIYA GRW+ V +R MMK+ +KK G S
Sbjct: 569 HKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMS 628
Query: 601 LVHINGKTCTFTVED 615
V G+ FTV D
Sbjct: 629 WVEYKGQVHKFTVGD 643
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 187/448 (41%), Gaps = 96/448 (21%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WNS I +A++LF M
Sbjct: 160 TLADWNSMISGCWKSGNETEAVVLFNMMPAR----------------------------- 190
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I T+MV YAK L+ A + FD+MP+R V SWNAM +AQ +
Sbjct: 191 ----------NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 138 KVLCLFYNMRLVGIQADFVT-VMGLTQAA--------------IHAKHLSL-------LK 175
+ L LF+ M GI D T V+ ++ + I KH+ L L
Sbjct: 241 EALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALL 300
Query: 176 SVHS-FGI---------HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
+H+ FG +G + N ISAY + L +A +F + + R VVS
Sbjct: 301 DMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK--RDVVS 358
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
WNS+I G + S+ ++ MI +PD T+ S+LS+C AL V
Sbjct: 359 WNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIV 418
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
L +S N+LI MYSKCG + A +F M R VS+ +ISG+A G EA+
Sbjct: 419 REKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAI 478
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK---------WFDNYACSGGLKDNVM 395
+L ME G PD VT + +++ C +G L GK D+YAC
Sbjct: 479 KLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYAC--------- 529
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEK 423
++D+ + G + +A+ L ++P K
Sbjct: 530 ----MVDLLGRAGELDEAKMLIQSMPMK 553
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 301/585 (51%), Gaps = 7/585 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYS----QMI 76
WN+ I+ VD +AL +F M + + + T+P + KACA L +M+
Sbjct: 117 WNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMV 176
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
I ++FVQ +VDM+AKC LD A +F+ M RD+A+W AMI G G
Sbjct: 177 EADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNW 236
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+V+ LF +MR G D + + A A L + ++H + G D+ V N
Sbjct: 237 LEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNAL 296
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y KC ++MA+ +F + VVSW+S+I G + + S++ + MI G P
Sbjct: 297 VDMYCKCGCVEMADCLFWSTNS--KDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINP 354
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ +T+ S+L + + G+ +H I +G + V++ LI +YSK G I A +F
Sbjct: 355 NSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIF 414
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D+ W +M++GYA G D A ++ G PD VTV+S++ C Q L
Sbjct: 415 WLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLI 474
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK Y + V NAL+DMY KCG + A+E+F + E+ V++ +I+
Sbjct: 475 QGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFG 534
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ +AL F M + P++VTF+A+L C+HAG ++KG ++ M Y ++PE
Sbjct: 535 KHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEK 594
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HYSC+ DL R GKL EA F+ +M + + + G LL AC++H ++I E V R+FE
Sbjct: 595 EHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFE 654
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
P+ ++ ++NIYA G W V +RTM++ +KK G SL
Sbjct: 655 QNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNSL 699
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 217/463 (46%), Gaps = 16/463 (3%)
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
DF ++ +H ++ + +V YAK + A ++FD MP R+ +WNA+I
Sbjct: 63 DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIK 122
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G G + L +F+ M + V V G T + +L + V+A
Sbjct: 123 GLVDAGRFSEALEMFWGM----VNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEA 178
Query: 189 DVSVCN---------TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
D++ N + +AKC L A VF ++ +R + +W ++IGG + +
Sbjct: 179 DIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQ--VRDLAAWTAMIGGTVHSGNW 236
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+ ++ + HM +GF D +++S+C L G +H + G D+ V N L
Sbjct: 237 LEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNAL 296
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+ MY KCG ++ A LF + VSW+++I GY+Q G + ++ LF M + G P+
Sbjct: 297 VDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNS 356
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T+ S++ + GK ++ GL+ + V +ALID+YSK G I A +F+
Sbjct: 357 STLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWL 416
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+K + W +M+AG A+NG A + ++ L+P+ VT ++VL C L +G
Sbjct: 417 TLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQG 476
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
+ K Y +N + + + D+ + G L+ A + Q M
Sbjct: 477 KELHAYVIK-YCINSVCSVNNALLDMYCKCGFLEVAKEVFQLM 518
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 144/311 (46%), Gaps = 3/311 (0%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W+S I + ++ LF M I PN+ T I + L +
Sbjct: 318 SKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKE 377
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++ FV + ++D+Y+K + A +F D+D+A WN+M+ G+A G+
Sbjct: 378 IHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGY 437
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ C ++ VG++ D VTV+ + L K +H++ I +++ SV N
Sbjct: 438 SDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNA 497
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y KC L++A+ VF+ + E R V++N +I + D +L+F+ M DG
Sbjct: 498 LLDMYCKCGFLEVAKEVFQLMTE--RNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIA 555
Query: 256 PDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T V+LLS C + +G L HS Y + + ++ +YS+CG +D A
Sbjct: 556 PDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWC 615
Query: 315 LFDGMCDRTRV 325
M + +
Sbjct: 616 FMSNMAEEPEI 626
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
CP+ + R +H+ + G ++ L+ Y+K GD+ A +FDGM R +W A
Sbjct: 61 CPD-FQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNA 119
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGK--W--FDNY 384
+I G G EAL +F+ M G V D T +I C GA+ G+ W +
Sbjct: 120 VIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEAD 179
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
SG + NV V AL+DM++KCG + +AR +F ++ + + +WT MI G +G ++E
Sbjct: 180 IASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEV 239
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+DLF+ M + + V+ AC AG L+ G
Sbjct: 240 VDLFNHMRSEGFGVDSLIAATVISACGRAGELQVG 274
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 266/488 (54%), Gaps = 37/488 (7%)
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
F++ L +K +S L +H+ G+D + +YA L + +F
Sbjct: 27 FISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFG 86
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ +V W +II G + +LNFY M+ G P+ T S+L +CP +
Sbjct: 87 RTQN--PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK--LCP--I 140
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI------------------------- 309
G+ +HS + GFD D+ V L+ +Y++ GD+
Sbjct: 141 EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCY 200
Query: 310 ------DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
D+AR LFDGM +R V W MI GY Q G +EAL LF M A P+ VTVL
Sbjct: 201 AKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVL 260
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
S++S CGQ GALE G+W +Y + G++ NV V AL+DMYSKCGS+ DAR +F + +K
Sbjct: 261 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 320
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
VV+W +MI G A++G EAL LF M + L P +TF+ +L AC H+G++ +GW F
Sbjct: 321 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 380
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
N M Y + P++ HY CM +LLGR G +++A + V++M I+ D +WGTLL AC++H
Sbjct: 381 NKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK 440
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
I +GE + L + ++ Y+ ++NIYA G WDGVA LRTMMK + VKK PG S +
Sbjct: 441 IALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIE 500
Query: 604 INGKTCTF 611
+N K F
Sbjct: 501 VNNKVHEF 508
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 179/377 (47%), Gaps = 41/377 (10%)
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
YA RLD + LF + + V W A+I G A G E+ L + M G++ + T
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV-------------------------- 192
+ + + K++HS + +G D+D+ V
Sbjct: 132 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 187
Query: 193 -----CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
++ YAK +L A ++F G+EE R V WN +I G T +++L +R
Sbjct: 188 KSLVSLTAMLTCYAKHGELDAARVLFDGMEE--RDGVCWNVMIDGYTQNGMPNEALVLFR 245
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +P+ TV+S+LS+C AL GR VHS+ + G +V V L+ MYSKCG
Sbjct: 246 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 305
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++ AR +FD + D+ V+W +MI GYA G EAL+LF +M G P +T + ++S
Sbjct: 306 SLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILS 365
Query: 368 GCGQSGALELGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKT 424
CG SG + G W F+ G++ + ++++ + G + A EL + E
Sbjct: 366 ACGHSGWVTEG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPD 424
Query: 425 VVSWTTMIAGCALNGEF 441
V W T++ C L+G+
Sbjct: 425 PVLWGTLLGACRLHGKI 441
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 38/330 (11%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + +AL + +M +EPN TF I K C + +H V
Sbjct: 96 WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAV 151
Query: 82 KSPFWSDIFVQTTMVDMYA-------------------------------KCDRLDCAYK 110
K F SD++V+T ++D+YA K LD A
Sbjct: 152 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 211
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD M +RD WN MI G+ Q G + L LF M + + VTV+ + A
Sbjct: 212 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 271
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L + VHS+ + G+ +V V + Y+KC L+ A LVF I++ + VV+WNS+I
Sbjct: 272 LESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD--KDVVAWNSMI 329
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGF 289
G ++L ++ M G P T + +LS+C + +G + + YG
Sbjct: 330 VGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGI 389
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ + ++++ + G ++ A L M
Sbjct: 390 EPKIEHYGCMVNLLGRAGHVEQAYELVKNM 419
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 318/586 (54%), Gaps = 13/586 (2%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSP-FWSDIFVQTTM 95
A+ LF + + PN+ + + +AC+ SDF+ ++I G ++K+ F SD+ V ++
Sbjct: 150 AIKLFVEFLEMGLVPNDYCYTAVIRACSN-SDFVGVGRVILGFLMKTGHFESDVCVGCSL 208
Query: 96 VDMYAKCDR-LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
+DM+ K + + AYK+FDKM + +V +W MI QMGF + + F +M L G ++D
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN---DLKMAEL 211
T+ + A ++LSL + +HS+ I G+ DV + + YAKC+ +
Sbjct: 269 KFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRK 326
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYG-DKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCV 269
VF +++ +V+SW ++I G + +++N + MI G P+ T S +C
Sbjct: 327 VFDRMQD--HSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
G+ V H G + SV N++ISM+ KC ++ AR F+ + ++ VS+
Sbjct: 385 NVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNT 444
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+ G + D + A L + T S++SG G+L G+ + G
Sbjct: 445 FLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLG 504
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L N VCNALI MYSKCGSI A +F + + V+SWT+MI G A +G L+ F+
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFN 564
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
QM + ++PN VT++A+L AC+H G + +GW +FN M + +++ P++ HY+CM DLL R
Sbjct: 565 QMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G L +A +F+ +MP ++D +W T L AC++H N E+G+ A ++ E +P+ A Y++++
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLS 684
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
NIYA G+W+ +R MK + K G S + + K F V D
Sbjct: 685 NIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGD 730
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 233/484 (48%), Gaps = 20/484 (4%)
Query: 7 PPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKACA 65
PP + S+ IN + I ++ + A+ M ++ I P +++TF + K+C
Sbjct: 19 PPSI-----SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCI 73
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM---PDRDVAS 122
+ F +++H +++ D + +++ +Y+K L A +F+ M RDV S
Sbjct: 74 RARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVS 133
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
W+AM+ F G + LF +G+ + + +A ++ + + + + F +
Sbjct: 134 WSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLM 193
Query: 183 HIG-VDADVSVCNTWISAYAKC-NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
G ++DV V + I + K N + A VF + E VV+W +I C
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCMQMGFPR 251
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+++ F+ M+ GF D T+ S+ S+C E L GR +HS I G DV +L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVEC--SLV 309
Query: 301 SMYSKC---GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEV 356
MY+KC G +D R +FD M D + +SWTA+I+GY Q +L EA+ LF M G V
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHV 369
Query: 357 -PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ T S CG +GK +A GL N V N++I M+ KC + DAR
Sbjct: 370 EPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDART 429
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
F +L EK +VS+ T + G N +F A +L ++ E +L + TF ++L + G
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGS 489
Query: 476 LEKG 479
L KG
Sbjct: 490 LRKG 493
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 292/548 (53%), Gaps = 8/548 (1%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H I + F+ +VD Y+K L A F ++ + SWN ++ +AQ
Sbjct: 52 RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G LF+ M G++ + VT+ A A++L+L + ++ ++ D V
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVE 171
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ I+ Y +C +++ AE F E + VV W ++I + + +L R M +G
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPE--KDVVCWTAMISAYAHNWRTSRALELVRRMDLEG 229
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI-NTLISMYSKCGDIDSA 312
+ + T VSLL +C L G H G D +V+ TL+++Y KCG +D A
Sbjct: 230 IKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDA 289
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R + D M RT VSWTAMI+ YAQ G+ EA+ LF M+ G P +T++S++ C
Sbjct: 290 RRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVL 349
Query: 373 GALELGKWFD-NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT--VVSWT 429
G L LGK S ++M+ NA+I MY KCG++ ARE+F +P +T VV+WT
Sbjct: 350 GTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWT 409
Query: 430 TMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI A NG EA++LF +M+ + PNRVTFL+VL AC+H G LE+ W +F M
Sbjct: 410 AMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGP 469
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALD-FVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ V P +HY C+ DLLGR G+L EA ++ ++D W L AC+++ ++E
Sbjct: 470 DFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERS 529
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
+ A R+ ELEP + A V ++N+YA GR VA +R MK + VKKF G+S + IN +
Sbjct: 530 QRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNR 589
Query: 608 TCTFTVED 615
F V D
Sbjct: 590 VHEFMVSD 597
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 204/447 (45%), Gaps = 16/447 (3%)
Query: 20 NQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
+ WN + A LF M + PN +T AC + + ++
Sbjct: 99 HSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNEL 158
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
I D V+++++ MY +C ++ A + FD+ P++DV W AMI +A +
Sbjct: 159 IASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRA 218
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 198
L L M L GI+ T + L A L + H IG+D + V T ++
Sbjct: 219 LELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVN 278
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC + A V + +RT VSW ++I +++N ++ M +G P
Sbjct: 279 LYGKCGRVDDARRVLDAMP--VRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSD 336
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T++S++ SC L G+ +H+ F + ++N +I+MY KCG+++ AR +F+
Sbjct: 337 ITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFE 396
Query: 318 GMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEA-AGEVPDLVTVLSMISGCGQSGA 374
+ RTR V+WTAMI YAQ G +EA+ LF M G P+ VT LS++ C G
Sbjct: 397 CVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQ 456
Query: 375 LELGKWFDNYACSGGLKDNVMVCN----ALIDMYSKCGSIGDARELFYALP--EKTVVSW 428
LE W + CS G V L+D+ + G +G+A +L E VV W
Sbjct: 457 LEQA-W--EHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCW 513
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELD 455
++ C +NG+ + ++ EL+
Sbjct: 514 IAFLSACQMNGDLERSQRAAKRVSELE 540
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 4/275 (1%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL C L + R +H+ D + + N L+ YSK G + A+ F +
Sbjct: 40 SLLWQC---RGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLH 96
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
SW +++ YAQ G A LF M + G P+ VT+ + + C + L LG+ +
Sbjct: 97 NAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLN 156
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
S L+ + V ++LI MY +C I +A F PEK VV WT MI+ A N
Sbjct: 157 ELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTS 216
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
AL+L +M ++ T++++L AC L G + + +
Sbjct: 217 RALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTL 276
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+L G+ G++ +A + +MP+++ W ++ A
Sbjct: 277 VNLYGKCGRVDDARRVLDAMPVRTSVS-WTAMIAA 310
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/599 (32%), Positives = 312/599 (52%), Gaps = 14/599 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + + + LF RM+ I PN TF + A A Q +H V
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE-KVL 140
K S +FV ++++MYAKC ++ A +F+ M RD+ SWN ++ G Q+ E + L
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL-QLNECELEAL 287
Query: 141 CLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
LF+ R Q+ + TV+ L + K L+L + +HS + G +V
Sbjct: 288 QLFHESRATMGKMTQSTYATVIKL---CANLKQLALARQLHSCVLKHGFHLTGNVMTALA 344
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
AY+KC +L A +F + G R VVSW +II GC ++ + M D P+
Sbjct: 345 DAYSKCGELADALNIF-SMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++L + + + +H+ I + SV L++ YSK G + A +F
Sbjct: 404 EFTYSAMLKASLS----ILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFK 459
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG-QSGALE 376
+ + V+W+AM+S +AQ GD + A LF M G P+ T+ S+I C S ++
Sbjct: 460 MIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVD 519
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ F + D + V +AL+ MYS+ G+I A+ +F ++ +VSW +MI+G A
Sbjct: 520 QGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYA 579
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G ++A++ F QM ++ + VTFLAV+ CTH G + +G YF+ M + +++NP +
Sbjct: 580 QHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTM 639
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY+CM DL R GKL E + ++ MP + A +W TLL AC++H+N+E+G++ A +L
Sbjct: 640 EHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLS 699
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
LEPH ++ YV ++NIYA G+W +R +M +VKK G S + I K +F D
Sbjct: 700 LEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFD 758
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 240/509 (47%), Gaps = 10/509 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L++I R N + + + + L F ++ + ++ T + KAC + D
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 70 FLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + +H VK ++ T++VDMY KC + ++F+ MP ++V +W +++
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G A +V+ LF+ MR GI + T + A L L + VH+ + G +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
V VCN+ ++ YAKC ++ A+ VF +E R +VSWN+++ G + ++L +
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMET--RDMVSWNTLMAGLQLNECELEALQLFHE 292
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+ +T +++ C + L R +HS + +GF L +V+ L YSKCG+
Sbjct: 293 SRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGE 352
Query: 309 IDSARFLFDGMC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+ A +F R VSWTA+ISG Q GD+ A+ LF M +P+ T +M+
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML- 411
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
++ L + V AL+ YSK GS DA +F + +K VV+
Sbjct: 412 ---KASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVA 468
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-HAGFLEKGWGYFNLM 486
W+ M++ A G+ A LF++M ++PN T +V+ AC + +++G + +
Sbjct: 469 WSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAIS 528
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEA 515
K Y+ + + S + + RKG + A
Sbjct: 529 IK-YRYHDAICVSSALVSMYSRKGNIDSA 556
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDS 311
G D T+ +L +C V G +H + G D +VS +L+ MY KCG +
Sbjct: 94 GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+F+GM + V+WT++++G A E + LFF M A G P+ T S++S
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVAS 213
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
GAL+LG+ + G + +V VCN+L++MY+KCG + DA+ +F + + +VSW T+
Sbjct: 214 QGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTL 273
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+AG LN +EAL LFH+ + + T+ V++ C + L + + K +
Sbjct: 274 MAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLK-HG 332
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ N + +AD + G+L +AL+ + W ++ C + +I + +
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 552 YRLFE 556
R+ E
Sbjct: 393 SRMRE 397
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 26/315 (8%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W + I + + A++LF RM+++ + PN T+ + KA S +
Sbjct: 366 SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA----SLSILPPQ 421
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++K+ + V T ++ Y+K + A +F + +DV +W+AM+ AQ G
Sbjct: 422 IHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGD 481
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E LF M + GI+ + T+ + A A + + + H+ I + V +
Sbjct: 482 CEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSS 541
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S Y++ ++ A++VF + R +VSWNS+I G ++ +R M G
Sbjct: 542 ALVSMYSRKGNIDSAQIVFE--RQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 255 RPDVTTVVSLLSSCVCPEALVQGR-----LVHSHGI-----HYGFDLDVSVINTLISMYS 304
+ D T ++++ C +V+G+ +V H I HY ++ +YS
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA---------CMVDLYS 650
Query: 305 KCGDIDSARFLFDGM 319
+ G +D L M
Sbjct: 651 RAGKLDETMSLIRDM 665
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K+ + W++ + + A LF +M I+PN T + ACA S +
Sbjct: 459 KMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGV 518
Query: 72 -YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ H +K + I V + +V MY++ +D A +F++ DRD+ SWN+MI G+
Sbjct: 519 DQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGY 578
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
AQ G+ K + F M GIQ D VT + + H
Sbjct: 579 AQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTH 615
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 306/576 (53%), Gaps = 34/576 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVD---MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+MIH ++K+ + + + +++ + D L A +F+ + + ++ WN M G
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A L L+ M +G+ + T L ++ +K + +H + +G D D+
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 191 SVCNTWISAYAKCNDLKMAELVF-----RGI------------------------EEGLR 221
V + IS Y + L+ A VF R + E ++
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSWN++I G ++L ++ M+ RPD +T+VS++S+C ++ GR VH
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S +GF ++ ++N LI +Y KCG++++A LF+G+ + +SW +I GY
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNA 399
EAL LF M +GE P+ VT+LS++ C GA+E+G+W Y G+ + +
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY+KCG I A+++F ++ +++ SW MI G A++G A D+F +M + ++ P+
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 423
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TF+ +L AC+H+G L+ G F M + Y++ P+L HY CM DLLG G KEA + +
Sbjct: 424 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
+M ++ D IW +LL ACK+H N+E+GE A L ++EP + YV ++NIYA GRW+
Sbjct: 484 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 543
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA +R ++ +KK PG S + I+ F + D
Sbjct: 544 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 579
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 253/531 (47%), Gaps = 80/531 (15%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R ++ AL L+ M + PN TFPF+ K+CAK F Q IHGH++
Sbjct: 56 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLD-------------------------------CAYK 110
K + D++V T+++ MY + RL+ A K
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 175
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD++P +DV SWNAMI G+A+ G ++ L LF M ++ D T++ + A +
Sbjct: 176 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G +++ + N I Y KC +++ A +F G+ + V+SWN++I
Sbjct: 236 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL--SYKDVISWNTLI 293
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 294 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKG 353
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S +LI MY+KCGDI++A+ +FD + +R+ SW AMI G+A G + A +F
Sbjct: 354 VANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFS 413
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M PD +T + ++S C SG L+LG
Sbjct: 414 RMRKNEIEPDDITFVGLLSACSHSGMLDLG------------------------------ 443
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALN-----GEFVEALDLFHQMMELDLRPNRVTF 463
R +F ++ E ++ GC ++ G F EA ++ + M ++ P+ V +
Sbjct: 444 -----RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIW 495
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++L+AC G +E G Y + K+ NP Y ++++ G+ E
Sbjct: 496 CSLLKACKMHGNVELGESYAQNLIKIEPKNP--GSYVLLSNIYATAGRWNE 544
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
+++ WN+ I A+ A +F RM+KN+IEP+++TF + AC+
Sbjct: 388 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS 435
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 312/575 (54%), Gaps = 4/575 (0%)
Query: 30 VDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI 89
V K H+ L ++ + +DI N P + KAC+ + + ++ ++KS SD
Sbjct: 2 VSKGLNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDF 61
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
+ + + YAK + A K+FD MP +D SWN +I G+ Q G+ + +F M
Sbjct: 62 VICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYEC 121
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAYAKCNDLKM 208
GI V + + + L +++H+ + G + ++ V + + Y K D M
Sbjct: 122 GIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLM 181
Query: 209 AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
A VF IE ++ VVSW +++ GC+ ++ +L+ +R M +G RP+ T++++L +
Sbjct: 182 ALRVFDQIE--VKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAF 239
Query: 269 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRVSW 327
G+ +H + +GFDLD +++LI +Y + + + A+ F+ + V W
Sbjct: 240 AELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMW 299
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
+++I Y + D EAL+LF M A G P+ VT+L++I+ C +L+ G Y
Sbjct: 300 SSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVK 359
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
GL + + NALI+MYSKCG + + ++F + K VSW+T+I L+G EAL L
Sbjct: 360 CGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCL 419
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
FH+M + P+ +TFLAVL AC H+G +++G F+ + K +V+ + HY+C+ DLLG
Sbjct: 420 FHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLG 479
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
+ GK+ +A D +++MP+K IW +L+ ACKIH +EI E +A L + EP +AA +
Sbjct: 480 KSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHTL 539
Query: 568 MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
++ IYA G W V ++R +M+ + K G S V
Sbjct: 540 LSMIYAESGNWFAVEDVRRLMRVQGLSKCYGFSQV 574
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 214/438 (48%), Gaps = 8/438 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN I + ++F+ M + I P + C +L D + IH +
Sbjct: 94 SWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRAIHALV 153
Query: 81 -VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+ +IFV T++VD Y K A ++FD++ ++V SW A++ G +
Sbjct: 154 LIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMA 213
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L F M++ G++ + VT++ + A K +H + G D D ++ I
Sbjct: 214 LDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHI 273
Query: 200 YAKCND-LKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPD 257
Y + + L++A+L F ++ VV W+SIIG C D ++L +R M DG P+
Sbjct: 274 YCRSREGLQLAKLTFE--RSNVKDVVMWSSIIGSYCRSADSI-EALKLFRWMRADGTEPN 330
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+++++++C +L G H + + G + D + N LI+MYSKCG + ++ +F
Sbjct: 331 SVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFK 390
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M + VSW+ +I+ Y G EAL LF M+ G PD +T L+++S C SG ++
Sbjct: 391 EMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKE 450
Query: 378 GKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGC 435
G+ FDN G + V L+D+ K G + DA ++ A+P K + W+++++ C
Sbjct: 451 GQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSAC 510
Query: 436 ALNGEFVEALDLFHQMME 453
++G A L ++++
Sbjct: 511 KIHGRLEIAERLAQELIK 528
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 161/367 (43%), Gaps = 17/367 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + + + + AL FR M+ N + PN +T I A A+L + IHG+
Sbjct: 196 SWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYA 255
Query: 81 VKSPFWSDIFVQTTMVDMYAKC-DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+ F D ++++ +Y + + L A F++ +DV W+++I + + +
Sbjct: 256 FRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSIEA 315
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L LF MR G + + VT++ + A L H + + G++ D + N I+
Sbjct: 316 LKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINM 375
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y+KC + + +F+ E ++ VSW+++I ++L + M G PD
Sbjct: 376 YSKCGCVVASHQIFK--EMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAM 433
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T +++LS+C + +G+ + + G L V L+ + K G +D A +
Sbjct: 434 TFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRA 493
Query: 319 MCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV---TVLSMISGCGQSGA 374
M + + W++++S G L+ A RL A E P T+LSMI
Sbjct: 494 MPMKPSTTIWSSLVSACKIHGRLEIAERL--AQELIKSEPSNAANHTLLSMIYA------ 545
Query: 375 LELGKWF 381
E G WF
Sbjct: 546 -ESGNWF 551
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 293/553 (52%), Gaps = 5/553 (0%)
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
AK + +H ++ + + F+ +V+MY+KC LD A KLFD MP R++ SW
Sbjct: 16 AKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWT 75
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
AMI G +Q + + F MR+ G +A + + K +H +
Sbjct: 76 AMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKF 135
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G+ +++ V + Y+KC + A VF E + VSW ++I G + +F+++L
Sbjct: 136 GIGSELFVGSNLEDMYSKCGAMFDACKVFE--EMPCKDEVSWTAMIDGYSKIGEFEEALL 193
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
++ MI + D + S L +C +A GR VHS + GF+ D+ V N L MYS
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253
Query: 305 KCGDIDSARFLF--DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
K GD++SA +F D C R VS+T +I GY + +++ L +F + G P+ T
Sbjct: 254 KAGDMESASNVFGIDSEC-RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
S+I C ALE G ++ V + L+DMY KCG + A + F + +
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGD 372
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
T ++W ++++ +G +A+ F +M++ ++PN +TF+++L C+HAG +E+G Y
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
F M K Y V P HYSC+ DLLGR G+LKEA +F+ MP + +A W + L AC+IH
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ E+G+ A +L +LEP ++ V ++NIYA +W+ V ++R M+ VKK PG S V
Sbjct: 493 DKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWV 552
Query: 603 HINGKTCTFTVED 615
+ KT F ED
Sbjct: 553 DVGYKTHVFGAED 565
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 208/421 (49%), Gaps = 3/421 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I ++ +A+ F M+ P F +ACA L + +H +
Sbjct: 74 WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 133
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S++FV + + DMY+KC + A K+F++MP +D SW AMI G++++G E+ L
Sbjct: 134 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 193
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + D + A K +SVHS + +G ++D+ V N Y+
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K D++ A VF GI+ R VVS+ +I G ++ + L+ + + G P+ T
Sbjct: 254 KAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
SL+ +C AL QG +H+ + FD D V + L+ MY KCG ++ A FD + D
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGD 372
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
T ++W +++S + Q G +A++ F M G P+ +T +S+++GC +G +E G +
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
F + + G+ + +ID+ + G + +A+E +P E W + + C ++G
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492
Query: 440 E 440
+
Sbjct: 493 D 493
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 118/214 (55%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + ++ + + L +G+ +H+ I G+ + N L++MYSKCG++D A LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M R VSWTAMISG +Q EA+R F M GEVP S I C G++E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+GK A G+ + V + L DMYSKCG++ DA ++F +P K VSWT MI G +
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
GEF EAL F +M++ ++ ++ + L AC
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D + +I ++ L GK G + N L++MYSKCG + A +LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+P++ +VSWT MI+G + N +F EA+ F M P + F + ++AC G +E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
G L K + + EL S + D+ + G + +A + MP K + W ++
Sbjct: 124 MGKQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMI 179
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 277/539 (51%), Gaps = 32/539 (5%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A ++FD++PD D ++N++I ++ G ++ LCL ++ GI + T+ + +A
Sbjct: 60 ARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSR 119
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
A+ + H I +G V V N + + A L+ + +F + R VVSWN
Sbjct: 120 ARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPH-RNVVSWN 178
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++IGGC + ++ +R M G DV T VSLL C L GRLVH H +
Sbjct: 179 TMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLAS 238
Query: 288 GFDLDVSVINTLISMYSKCGD-------------------------------IDSARFLF 316
G +D+ + N L+ MY KCGD +D+AR F
Sbjct: 239 GSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWF 298
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ M +R +SW AMIS Y Q G E L L+ M++ G PD VT+ ++S GQ+G L
Sbjct: 299 EQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLA 358
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ Y V V N+LIDMY++CG + + LF +P K +SW +I A
Sbjct: 359 SGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALA 418
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
++G EA+ F M+ P+ +TF+ +L AC+H G LE G YF M +Y V PE+
Sbjct: 419 MHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEV 478
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY+CM DLLGR G L +A+D ++ MP+K D +WG L+ AC+IH ++EIG+ +L E
Sbjct: 479 EHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLE 538
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
LE + +V ++N+ +W+ + LR +M+ KK G S + IN F VED
Sbjct: 539 LEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVED 597
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 211/466 (45%), Gaps = 32/466 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS IR + +AL L R + + I PN T PF+ KAC++ ++ HG +
Sbjct: 75 YNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEHALATHGVAI 134
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM-PDRDVASWNAMIVGFAQMGFLEKVL 140
K + +FV ++ A L + +LF +M P R+V SWN MI G AQ G +
Sbjct: 135 KLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEAC 194
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF MR G+ AD T + L +L + + VH + G D+ + N + Y
Sbjct: 195 ALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMY 254
Query: 201 AKCNDLKMAELVF---------------------------RGIEEGL--RTVVSWNSIIG 231
KC DL MA F R E + R ++SWN++I
Sbjct: 255 GKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMIS 314
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G +F ++L Y M G PD T+ +LS L GR++H + D
Sbjct: 315 CYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDP 374
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
V+V+N+LI MY++CG +D++ LF M ++ +SW +I A G EA+ F AM
Sbjct: 375 GVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMV 434
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ PD +T + ++S C G LE G+ +F +K V ++D+ + G +
Sbjct: 435 SDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHL 494
Query: 411 GDARELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
A +L +P K VV W +I C ++G Q++EL+
Sbjct: 495 AKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELE 540
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN+ I V + L L+ RMK + P+ +T + + D +MIH
Sbjct: 305 NIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIH 364
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I S + V +++DMYA+C ++D + LF +MP+++ SWN +I A G +
Sbjct: 365 CYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQ 424
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + F M D +T +GL A H
Sbjct: 425 EAVMFFRAMVSDAFSPDEITFVGLLSACSHG 455
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 273/496 (55%), Gaps = 5/496 (1%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
S+N I FA L LF +M I+ D T+ L AA SL ++ H+
Sbjct: 120 SYNVAIRFFAS-SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALL 178
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
IG++ ++ I+ Y+ +D A VF GI R VVSWN+++ +
Sbjct: 179 GKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPT--RDVVSWNAMMKAYGRVGMNGE 236
Query: 242 SLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+R M+ +G P+ TV +L++C LV GR V ++D V + L+
Sbjct: 237 VGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALL 296
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY KCG+I AR +FD + D+ V+W AMI+GYAQ G +EA+ LF +M AG PD +
Sbjct: 297 GMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKI 356
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+ ++S C GALELG D YA GL NV V AL+DMY+KCG + A E+F +
Sbjct: 357 TLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKM 416
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKG 479
P K V SW +I G A NG EA+ F M E L+P+ +TF+ VL AC HAG ++ G
Sbjct: 417 PCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDG 476
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
+FN +T +Q+ P++ HYSCM DLL R G L+EA DF++ +P K DA + G LL AC+
Sbjct: 477 KRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACR 536
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
+N+EIGE V R+ +LEP ++ YV + IYA R D A +R +M+ V K PG
Sbjct: 537 KCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGC 596
Query: 600 SLVHINGKTCTFTVED 615
S V ++GK F D
Sbjct: 597 SWVEVSGKVLEFYAGD 612
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 197/407 (48%), Gaps = 6/407 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
+ H +L LF M ++ I P++ T PF+ A A+ ++ H + K
Sbjct: 131 SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTV 190
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MY+ D A K+FD +P RDV SWNAM+ + ++G +V +F +M G
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 153 ADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
A + + AA + L L + V + ++ D V + + Y KC ++ A
Sbjct: 251 APNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
VF I + + +V+WN++I G +++++ + M G RPD T+ +LS+C
Sbjct: 311 VFDTIID--KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAV 368
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
AL G + + G +V V L+ MY+KCGD+D A +F M + SW A+I
Sbjct: 369 GALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALI 428
Query: 332 SGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG 389
G A G DEA++ F M G PD +T + ++S C +G ++ GK WF++
Sbjct: 429 CGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQ 488
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
+ + + ++D+ ++ G + +A + +P+K V ++A C
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I +++A+ LF M+ + P+ +T + AC+ + + G
Sbjct: 320 IVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDG 379
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + +S+++V T +VDMYAKC LD A ++F KMP ++VASWNA+I G A G ++
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDE 439
Query: 139 VLCLFYNMR-LVGIQADFVTVMGLTQAAIHA-----------------------KHLS-- 172
+ F MR G++ D +T +G+ A +HA +H S
Sbjct: 440 AIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCM 499
Query: 173 ---LLKSVH-----SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
L +S H F I D + ++A KC ++++ E V I + L
Sbjct: 500 VDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQ-LEPTN 558
Query: 225 SWNSIIGGCTYG--DKFDDS 242
SWN ++ Y D+ DDS
Sbjct: 559 SWNYVVSSKIYASSDRLDDS 578
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 303/573 (52%), Gaps = 46/573 (8%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSD--IFVQTTMVDMYAKCDRL 105
+D P+ L+F + C + + IH I+K+ D + + T + + A+ +
Sbjct: 31 HDFNPHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPI 87
Query: 106 DCAY--KLFDKMPDRDVASWNAMIVGFAQMGFLE-KVLCLFYNMRLVGIQADFVTVMGLT 162
D Y L ++ ++ +NA+I G A + L ++ M GI D T+ +
Sbjct: 88 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 147
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
+A ++ + + VH I +G+ +DV V NT + YA C+ ++ A VF + R
Sbjct: 148 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQ--RD 205
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
+VSW ++I G Y M GF + + + +S V
Sbjct: 206 LVSWTTMIQG-------------YVKM---GFAREGVGLYIIRNSNV------------- 236
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+LDV V N L+ MY KCGD + AR +F M + VSW +MISG AQKG E
Sbjct: 237 -------NLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKE 289
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
+L +F M+ G PD VT++++++ C G LELGKW Y ++ + + NAL+D
Sbjct: 290 SLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVD 349
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY+KCGSI A +F A+ K V S+T MI G A++G+ +ALDLF +M ++ + P+ VT
Sbjct: 350 MYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVT 409
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F+ VL AC+H G +E+G YF M+ +Y + P+L HY CM DLLGR G + EA +F+++M
Sbjct: 410 FVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNM 469
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
PI+ DA + G LL ACKIH +E+GE V ++ ++EP YV M+NIY+ RW
Sbjct: 470 PIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDAL 529
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
LR MK ++K PG S + ++G F D
Sbjct: 530 KLRKTMKERNLEKTPGCSSIELDGVIHEFQKGD 562
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 245/531 (46%), Gaps = 84/531 (15%)
Query: 1 MAASSLP--PR----LNKIYRSSTINQWNSQIRE-AVDKNEAHKALLLFRRMKKNDIEPN 53
+ A SLP PR L R+ + +N+ IR A N++ + L+++++M I P+
Sbjct: 80 LCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPD 139
Query: 54 NLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD 113
N T PF+ KACA+ + +HG +K SD++V T++ MYA CD + A K+FD
Sbjct: 140 NYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFD 199
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
P RD+ SW MI G+ +MGF + + L Y +R
Sbjct: 200 TSPQRDLVSWTTMIQGYVKMGFAREGVGL-YIIR-------------------------- 232
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ V+ DV V N + Y KC D A VF+ E ++ VVSWNS+I G
Sbjct: 233 ---------NSNVNLDVFVGNALVDMYLKCGDANFARKVFQ--EMPVKNVVSWNSMISGL 281
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+F +SL +R M G +PD T+V++L+SC L G+ VH++ D
Sbjct: 282 AQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADG 341
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ N L+ MY+KCG ID A ++F M + S+TAMI G A G +AL LF M
Sbjct: 342 FIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKM 401
Query: 354 GEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G PD VT + +++ C G +E G K+F++ + L+ + ++D+ + G I +
Sbjct: 402 GIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINE 461
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A E +P + P+ A+L AC
Sbjct: 462 AEEFIRNMP----------------------------------IEPDAFVLGALLGACKI 487
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELN-HYSCMADLLGRKGKLKEALDFVQSM 522
G +E G ++M K+ ++ P + Y M+++ + ++AL ++M
Sbjct: 488 HGKVELGE---SVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 535
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/615 (30%), Positives = 313/615 (50%), Gaps = 22/615 (3%)
Query: 20 NQWNSQIREAVDKNEAHKALL-------LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
N WN + +A +A L +++ + + P + C +
Sbjct: 38 NNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLL-HVCVETGSLGG 96
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +HGH+VK+ +D+FV T++V+ Y +C A LFD+MP+++V +W A+I G+
Sbjct: 97 ARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTV 156
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
L + L +F M G T+ + A + + L VH + I + S+
Sbjct: 157 NSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSI 216
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD-SLNFYRHMIY 251
N+ YAK L+ A FR + + + V++W ++I C + + + L + M+
Sbjct: 217 GNSLCRMYAKSGSLESAMRAFRMVPD--KNVITWTTMISACAEDENYTELGLTLFLDMLM 274
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
DG P+ T+ S++S C L G+ V + G ++ V N+ + +Y + G+ D
Sbjct: 275 DGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDE 334
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQ-----KGDLD------EALRLFFAMEAAGEVPDLV 360
A F+ M D + ++W AMISGYAQ K DL +AL++F ++ + PDL
Sbjct: 335 AMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLF 394
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T S++S C ALE G+ G +V+V +AL++MY+KCG I DA + F +
Sbjct: 395 TFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEM 454
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+T+V+WT+MI+G + +G EA+ LF M +RPN +TF+ VL AC++AG EK
Sbjct: 455 SIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAE 514
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
YF++M + Y++ P ++HY CM D+ R G+L +A F++ + + IW +L+ C+
Sbjct: 515 HYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRS 574
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H N+E+ Y A RL EL P YV + N+Y RW VA +R +MK+ + +S
Sbjct: 575 HGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRS 634
Query: 601 LVHINGKTCTFTVED 615
+ I K F D
Sbjct: 635 WITIKDKVYFFKAND 649
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 12/141 (8%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC-----AKLSDFLY 72
T+ W S I +A+ LF M+ + PN +TF + AC A+ ++ +
Sbjct: 458 TLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYF 517
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFA 131
M + ++ P + MVDM+ + RLD A+ + + + A W++++ G
Sbjct: 518 DMMKEEYKIE-PI---VDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCR 573
Query: 132 QMGFLEKVLCLFYNMRLVGIQ 152
G +E L + RL+ ++
Sbjct: 574 SHGNME--LAFYAADRLIELR 592
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 306/557 (54%), Gaps = 5/557 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I E +A+LL++ M + +P+ +TF + +++H
Sbjct: 227 IIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHS 286
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
HIV+S +I + T +V MY+KC+ L+ LF+KMP R+V SWN M+ +A+ G K
Sbjct: 287 HIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRK 346
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ + M+L G++ D VT +GL + L L + VH + +AD+ + N+ ++
Sbjct: 347 AVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLN 406
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y +C +++ AE+VF GI + R V+SW +++ + ++ D +L + + G +P
Sbjct: 407 MYGRCGEVEQAEMVFDGILQ--RNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTC 464
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T + L +CV EAL +GRLVHS + G D+DVS+ + L++MY +CG I A+ FD
Sbjct: 465 ITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDD 524
Query: 319 M-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ V+W+AMI+ + Q G E L+ M+ G T S +S C L
Sbjct: 525 TEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLRE 584
Query: 378 GKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK +Y + V N+L+ MY KCGS+ ARE+F + + W +I+G A
Sbjct: 585 GKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYA 644
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ + +A++LFH+M + + P+ VTF+ +L C+H G L++G + M ++ + P
Sbjct: 645 QHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASMVEL-GLEPTQ 703
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
++Y+C+ DLLGR GKL+EA +F+QS+ + +LL +CK H +++ G A + E
Sbjct: 704 DNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIME 763
Query: 557 LEPHSAAPYVEMANIYA 573
++P S++ +V +++IY+
Sbjct: 764 MDPRSSSAHVVLSSIYS 780
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 234/440 (53%), Gaps = 4/440 (0%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
MY C +D A ++FD MP R+V +W AMI G + LE+ +F M L G +++FVT
Sbjct: 105 MYGSCGSVDDAKRVFDAMPARNVITWTAMI-GAHAVTSLEQAFKVFRLMELEGFKSNFVT 163
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ L QA + L + +H + + +CN I+ Y +C L+ A +F +
Sbjct: 164 YVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMV 223
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
E R +++WN++I ++++ Y+ M+ +G +PD T V+LL+ PEAL +
Sbjct: 224 E--RDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEV 281
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+LVHSH + G +++++ L++MYSKC ++ R+LF+ M R +SW M++ YA+
Sbjct: 282 KLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKH 341
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G +A+++ M+ G PD VT + +++ C S L+LG+ + G + ++++
Sbjct: 342 GLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILW 401
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
N+L++MY +CG + A +F + ++ V+SWT M+ + AL LFH + ++
Sbjct: 402 NSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVK 461
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
P +TFL L AC A L+KG + + + +++ S + + GR G +++A
Sbjct: 462 PTCITFLEALDACVGAEALDKGRLVHSCAVQSGN-DIDVSLGSALVAMYGRCGSIRDAKA 520
Query: 518 FVQSMPIKSDAGIWGTLLCA 537
++ + W ++ A
Sbjct: 521 CFDDTEVRKNHVTWSAMIAA 540
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 230/446 (51%), Gaps = 7/446 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A +FR M+ + N +T+ + +AC+K ++H V+S + + ++
Sbjct: 144 QAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALI 203
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY +C RL+ A +F M +RD+ +WNA+I + Q G +E+ + L+ M G + D V
Sbjct: 204 TMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKV 263
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + L + + L+ +K VHS + GV ++++ ++ Y+KC L+ +F +
Sbjct: 264 TFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKM 323
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ R V+SWN ++ ++ +M DG +PD T V LL+ C L
Sbjct: 324 PQ--RNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKL 381
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR VH + D+ + N+L++MY +CG+++ A +FDG+ R +SWTAM++ Y++
Sbjct: 382 GRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSR 441
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+ D AL LF A+ +G P +T L + C + AL+ G+ + A G +V +
Sbjct: 442 QNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSL 501
Query: 397 CNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALD--LFHQMME 453
+AL+ MY +CGSI DA+ F K V+W+ MIA +G+ E L F Q
Sbjct: 502 GSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQG 561
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKG 479
LD+ P TF + L AC++ L +G
Sbjct: 562 LDMSP--ATFASTLSACSNLADLREG 585
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 221/454 (48%), Gaps = 39/454 (8%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+AC K+ ++ +H IV++ + +F+ ++ Y KC LD A++ F++M ++V
Sbjct: 3 QACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVY 62
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
+W A+I AQ + L M L G++ D +T++
Sbjct: 63 TWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAA-------------------- 102
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
++ Y C + A+ VF + R V++W ++IG +
Sbjct: 103 ---------------LTMYGSCGSVDDAKRVFDAMPA--RNVITWTAMIGAHAV-TSLEQ 144
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ +R M +GF+ + T V+L+ +C PE L G ++H + ++ + N LI+
Sbjct: 145 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 204
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY +CG ++ AR +F M +R ++W A+I+ Y Q G ++EA+ L+ M G PD VT
Sbjct: 205 MYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVT 264
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++++ AL K ++ G+ N+ + AL+ MYSKC S+ D R LF +P
Sbjct: 265 FVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMP 324
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ V+SW M+ A +G +A+ + M ++P+ VT + +L CT + L+ G
Sbjct: 325 QRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRK 384
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ + + +L ++ + ++ GR G++++A
Sbjct: 385 VHGWIAE-GRCEADLILWNSLLNMYGRCGEVEQA 417
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 15/234 (6%)
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++ C + AL++ + + L + V + N LI Y KC S+ DA E F + K
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
V +WT +I CA + A+ L QM+ ++P+ +T LA L G ++ F+
Sbjct: 61 VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFD 120
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKG--KLKEALDFVQSMPI---KSDAGIWGTLLCACK 539
M P N + A ++G L++A + M + KS+ + TL+ AC
Sbjct: 121 AM-------PARNVITWTA-MIGAHAVTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACS 172
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVE-MANIYALGGRW-DGVANLRTMMKRN 591
+E+G + R E P + +Y GR D A +M++R+
Sbjct: 173 KPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERD 226
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 274/496 (55%), Gaps = 5/496 (1%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
S+N I FA L LF +M I+ D T+ L AA SL ++ H+
Sbjct: 120 SYNVAIRFFAS-SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALL 178
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
IG++ ++ I+ Y+ +D A VF GI R VVSWN+++ +
Sbjct: 179 GKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPT--RDVVSWNAMMKAYGRVGMNGE 236
Query: 242 SLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+R M+ +G P+V TV +L++C LV GR V ++D V + L+
Sbjct: 237 VGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALL 296
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY KCG+I AR +FD + D+ V+W AMI+GYAQ G +EA+ LF +M AG PD +
Sbjct: 297 GMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKI 356
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+ ++S C GALELG D YA GL NV V AL+DMY+KCG + A E+F +
Sbjct: 357 TLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKM 416
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKG 479
P K V SW +I G A NG EA+ F M E L+P+ +TF+ VL AC HAG ++ G
Sbjct: 417 PCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDG 476
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
+FN +T +Q+ P++ HYSCM DLL R G L+EA DF++ +P K DA + G LL AC+
Sbjct: 477 KRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACR 536
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
+N+EIGE V R+ +LEP ++ YV + IYA R D A +R +M+ V K PG
Sbjct: 537 KCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGC 596
Query: 600 SLVHINGKTCTFTVED 615
S V ++GK F D
Sbjct: 597 SWVEVSGKVLEFYAGD 612
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 198/407 (48%), Gaps = 6/407 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
+ H +L LF M ++ I P++ T PF+ A A+ ++ H + K
Sbjct: 131 SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTV 190
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MY+ D A K+FD +P RDV SWNAM+ + ++G +V +F +M G
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 153 ADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
A V + + AA + L L + V + ++ D V + + Y KC ++ A
Sbjct: 251 APNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
VF I + + +V+WN++I G +++++ + M G RPD T+ +LS+C
Sbjct: 311 VFDTIID--KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAV 368
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
AL G + + G +V V L+ MY+KCGD+D A +F M + SW A+I
Sbjct: 369 GALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALI 428
Query: 332 SGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG 389
G A G DEA++ F M G PD +T + ++S C +G ++ GK WF++
Sbjct: 429 CGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQ 488
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
+ + + ++D+ ++ G + +A + +P+K V ++A C
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I +++A+ LF M+ + P+ +T + AC+ + + G
Sbjct: 320 IVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDG 379
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + +S+++V T +VDMYAKC LD A ++F KMP ++VASWNA+I G A G ++
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDE 439
Query: 139 VLCLFYNMR-LVGIQADFVTVMGLTQAAIHA-----------------------KHLS-- 172
+ F MR G++ D +T +G+ A +HA +H S
Sbjct: 440 AIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCM 499
Query: 173 ---LLKSVH-----SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
L +S H F I D + ++A KC ++++ E V I + L
Sbjct: 500 VDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQ-LEPTN 558
Query: 225 SWNSIIGGCTYG--DKFDDS 242
SWN ++ Y D+ DDS
Sbjct: 559 SWNYVVSSKIYASSDRLDDS 578
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 311/580 (53%), Gaps = 38/580 (6%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDC---AYKLFDKMPDRDVASWNAMIVGF 130
+ IH ++K+ + + + +++ D A +FD + + ++ WN M G
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A L L+ M +G+ D T L ++ +K + +H + +G D D+
Sbjct: 65 ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124
Query: 191 SVCNTWISAYAKCNDLKMAELVF--------------------RGIEEGL---------R 221
V + IS YA+ L+ A VF RG E +
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
VVSWN++I G + ++L ++ M+ RPD +T+V+++S+C +++ GR V
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
HS +GF ++ ++N LI +YSK G++++A LFDG+ ++ +SW +I GY
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW---FDNYACSGGLKDNVMVC 397
EAL LF M +GE P+ VT+LS++ C GA+++G+W + N G + + +
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364
Query: 398 NALIDMYSKCGSIGDARELF-YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
+LIDMY+KCG I A+++F ++ +++ +W MI+G A++G A D+F +M +
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI 424
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
P+ +TF+ +L AC+H+G L+ G F MT+ Y++ P+L HY CM DLLG G KEA
Sbjct: 425 EPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAE 484
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
+ + +MP++ D IW +LL ACKIH N+E+GE A +L ++EP ++ YV ++NIYA G
Sbjct: 485 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAG 544
Query: 577 RWDGVANLRTMMK-RNQVKKFPGQSLVHINGKTCTFTVED 615
RW+ VA +R ++ + KK PG S + I+ F + D
Sbjct: 545 RWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGD 584
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 236/458 (51%), Gaps = 40/458 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R ++ AL L+ M + P++ TFPF+ K+CAK Q IHGH++
Sbjct: 57 WNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVL 116
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRL-------------------------------DCAYK 110
K F DI+V T+++ MYA+ RL + A K
Sbjct: 117 KLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQK 176
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAK 169
LFD++P +DV SWNAMI G+ + G ++ L LF M ++ ++ D T++ + A +
Sbjct: 177 LFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSD 236
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ L + VHS+ G +++ + N I Y+K +++ A +F G+ + V+SWN++
Sbjct: 237 SIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWN--KDVISWNTL 294
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHY 287
IGG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H +
Sbjct: 295 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLK 354
Query: 288 GFDLDVSVINT-LISMYSKCGDIDSARFLFD-GMCDRTRVSWTAMISGYAQKGDLDEALR 345
G +VS + T LI MY+KCGDID+A+ +FD M +R+ +W AMISG+A G + A
Sbjct: 355 GVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFD 414
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMY 404
+F M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 415 IFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLL 474
Query: 405 SKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEF 441
G +A E+ +P E V W +++ C ++G
Sbjct: 475 GHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNL 512
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 287/561 (51%), Gaps = 3/561 (0%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
RR + ++ KAC + +D+ Y +H VK +D FV ++VDMYAK
Sbjct: 121 MRRRRPCPEAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAK 179
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
L+CA K+F+++P R+V SW +M+ G Q GF L LF MR + T+ +
Sbjct: 180 AGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATV 239
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A L + +H I G+ ++ + + Y KC +L+ A+ VF E
Sbjct: 240 ITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFD--ELSYI 297
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+V W ++I G T D+L + + P+ T+ ++LS+ L GR +H
Sbjct: 298 DLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIH 357
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ G V+N L+ MY+KC + A +F + ++ V+W +M+SGYA+ +
Sbjct: 358 GIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCN 417
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
+AL LF M G PD ++V+ +S G L +GK F YA N+ V AL+
Sbjct: 418 DALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALL 477
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
++Y+KCG + AR +F + ++ V+W MI G + G+ ++DLF +M++ + PN V
Sbjct: 478 NLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDV 537
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
F ++L C+H G + YF+ M + + + P + HY+CM D+L R G L+EAL+F+ +
Sbjct: 538 AFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDN 597
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MP+++D +WG L C++H ++ GE R+ L P YV ++N+Y G W+
Sbjct: 598 MPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKS 657
Query: 582 ANLRTMMKRNQVKKFPGQSLV 602
+R M+ + K PG S +
Sbjct: 658 QAIRRWMQEKGLVKLPGYSSI 678
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 232/461 (50%), Gaps = 7/461 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W S + V A LLLF +M+++++ P+ T + AC+ L + +HG +
Sbjct: 200 SWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSV 259
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K S+ F+ ++DMY KC L+ A +FD++ D+ W MIVG+ Q G L
Sbjct: 260 IKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDAL 319
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF + + I + VT+ + A+ + LSL +S+H + +G+ V N + Y
Sbjct: 320 RLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMY 379
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC + A +F I + VV+WNS++ G + +D+L ++ M G PD +
Sbjct: 380 AKCQAVSEANRIFGSISN--KDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAIS 437
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VV LS+ VC L+ G+ H + + + F ++ V L+++Y+KCGD+ SAR +FD M
Sbjct: 438 VVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMN 497
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK- 379
DR V+W AMI GY +GD ++ LF M G P+ V S++S C +G + K
Sbjct: 498 DRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKR 557
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
+FD+ A + ++ ++D+ ++ G++ +A E +P + S W + GC L+
Sbjct: 558 YFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELH 617
Query: 439 GEFVEALDLFHQMMELDL-RPNRVTFLAVLQACTHAGFLEK 478
+ +MM L RP+ ++ L T G EK
Sbjct: 618 SRLQFGEEAIKRMMVLHPERPDLYVLISNLY--TSNGMWEK 656
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 202/424 (47%), Gaps = 14/424 (3%)
Query: 92 QTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR---- 147
+T ++ YA L A +FD P D S+ M+ Q + + L +MR
Sbjct: 67 RTKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRP 126
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
Q DFV + L +A I + +H + +G AD V N+ + YAK DL+
Sbjct: 127 CPEAQDDFVLSLAL-KACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLE 184
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A VF I R VVSW S++ GC D L + M D P T+ +++++
Sbjct: 185 CARKVFERIPG--RNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITA 242
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C L QGR +H I G + + L+ MY KCG+++ A+ +FD + V W
Sbjct: 243 CSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLW 302
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
T MI GY Q G+ +ALRLF + A VP+ VT+ +++S Q L LG+ A
Sbjct: 303 TTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVK 362
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
GL + +V NAL+DMY+KC ++ +A +F ++ K VV+W +M++G A N +AL L
Sbjct: 363 LGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALML 422
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN------LMTKVYQVNPELNHYSC 501
F QM P+ ++ + L A G L G + ++ +Y LN Y+
Sbjct: 423 FKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNK 482
Query: 502 MADL 505
DL
Sbjct: 483 CGDL 486
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 131/262 (50%), Gaps = 13/262 (4%)
Query: 261 VVSLLSSCVCPEAL--VQGRLV-HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
++ LL SC +L + RL+ H+ G+ G + L+S Y+ GD+ SAR +FD
Sbjct: 32 LLRLLPSCGTLPSLRVLHARLLTHTQGLLLG---SLRARTKLLSCYAALGDLASARMVFD 88
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT--VLSM-ISGCGQSGA 374
G S+ M+ Q EA+ L M P+ VLS+ + C +S
Sbjct: 89 GTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSAD 148
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
G A G D V N+L+DMY+K G + AR++F +P + VVSWT+M++G
Sbjct: 149 YGYGTRLHCDAVKVGGADG-FVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSG 207
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVN 493
C NG + L LF++M + ++ P+ T V+ AC+ L +G W + +++ + N
Sbjct: 208 CVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSN 267
Query: 494 PELNHYSCMADLLGRKGKLKEA 515
++ + + D+ + G+L++A
Sbjct: 268 SFIS--AALLDMYVKCGELEDA 287
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 309/586 (52%), Gaps = 8/586 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + A + + F MK++ +P+ TF I ACA L + +H ++
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMI 437
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F S++FV +VDMYAK L A K F+ M D SWNA+IVG+ Q + ++
Sbjct: 438 KNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFF 497
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G+ D V++ + A + + L + H + +G+D ++ I Y
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYV 557
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A VF + R VVS N++I G T G +++++ ++ + G +P T
Sbjct: 558 KCGVVLAARDVFYSMPS--RNVVSVNALIAGYTMG-HLEEAIHLFQEIQMVGLKPTEVTF 614
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS--VINTLISMYSKCGD-IDSARFLFDG 318
LL C L GR +H + +GF L S V +L+ +Y +DS +
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGF-LSSSEMVCVSLLCLYMNSQRFVDSETLFSEL 673
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ V WTA+ISGYAQ+ ++AL+ + M + +PD S++ C +L+ G
Sbjct: 674 QYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNG 733
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCAL 437
+ + G + + C++LIDMY+KCG + + ++F +P + V+SW +MI G A
Sbjct: 734 QEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAK 793
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG EAL++F QM + + P+ VTFL VL AC+HAG + +G F+LM Y++ P ++
Sbjct: 794 NGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVD 853
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
H CM D+LGR G L EA +F+ + K+D +W TLL AC+ H + G+ A +L EL
Sbjct: 854 HLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMEL 913
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+P S++ YV +++IYA W G +LR MK VKK PG S +
Sbjct: 914 KPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 255/518 (49%), Gaps = 10/518 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + A +A+ F +KK ++ + + A A LS Y M+H
Sbjct: 277 WNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAT 336
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K +++V + +V+MYAKC ++D A ++F+ + +R++ WNAM+ GFAQ G ++V+
Sbjct: 337 KEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVME 396
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ G Q D T + A +L+ +H+ I +++ V N + YA
Sbjct: 397 FFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYA 456
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K LK A F ++ + VSWN+II G + D++ +R M+ +G PD ++
Sbjct: 457 KSGALKEARKQFELMK--IHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSL 514
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S++S+C + L +G+ H + G D ++LI MY KCG + +AR +F M
Sbjct: 515 ASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPS 574
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VS A+I+GY G L+EA+ LF ++ G P VT ++ GC + L LG+
Sbjct: 575 RNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 382 DNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
G L + MVC +L+ +Y D+ LF L K +V WT +I+G A
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+AL + M ++ P++ F +VL+AC L+ G +L ++ ++
Sbjct: 694 HHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSL---IFHTGFNMDEV 750
Query: 500 SC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+C + D+ + G +K +L + MP +++ W +++
Sbjct: 751 TCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 157/546 (28%), Positives = 254/546 (46%), Gaps = 46/546 (8%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D T+V+ Y RL A KLF ++P+ +V +WN MI G A+ GF E+ + F ++
Sbjct: 242 DQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G++A ++ + A L+ VH+ G+D +V V + ++ YAKC+ +
Sbjct: 302 KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMD 361
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF + E R +V WN+++GG + + F+ M G +PD T S+ S+
Sbjct: 362 AAKQVFNSLGE--RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSA 419
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C L G +H+ I F ++ V N L+ MY+K G + AR F+ M VSW
Sbjct: 420 CASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSW 479
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
A+I GY Q+ DEA +F M + G +PD V++ S++S C L+ G+
Sbjct: 480 NAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVK 539
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
GL + ++LIDMY KCG + AR++FY++P + VVS +IAG + G EA+ L
Sbjct: 540 VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHL 598
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---------WGYFNLMTKV--------- 489
F ++ + L+P VTF +L C A L G WG+ + V
Sbjct: 599 FQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYM 658
Query: 490 --------------YQVNPELNHYSCMADLLGRKGKLKEALDFVQSM---PIKSDAGIWG 532
Q L ++ + ++ ++AL F Q M I D +
Sbjct: 659 NSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFA 718
Query: 533 TLLCAC----KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL-RTM 587
++L AC + EI + + F ++ + + ++M YA G G + R M
Sbjct: 719 SVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDM---YAKCGDVKGSLQVFREM 775
Query: 588 MKRNQV 593
+RN V
Sbjct: 776 PRRNNV 781
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 231/505 (45%), Gaps = 38/505 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + +D + F M +++ PN TF + AC+ L D + + +H +
Sbjct: 110 WNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVF 169
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F F Q ++DMYAKC L A +FD + D SW A+I G+ + GF + +
Sbjct: 170 KTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVK 229
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ VG D +T++ T ++AY
Sbjct: 230 VFDRMQRVGHAPDQITLV-----------------------------------TVVNAYV 254
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
L A +F I VV+WN +I G +++++F+ + G + +++
Sbjct: 255 ALGRLADARKLFTQIPN--PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+ L G +VH+ G D +V V + L++MY+KC +D+A+ +F+ + +
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V W AM+ G+AQ G E + F M+ G PD T S+ S C L G
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQL 432
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
N+ V NAL+DMY+K G++ +AR+ F + VSW +I G
Sbjct: 433 HTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYN 492
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA +F +M+ + P+ V+ +++ AC + L++G L+ KV ++ S
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKV-GLDTSTCAGSS 551
Query: 502 MADLLGRKGKLKEALDFVQSMPIKS 526
+ D+ + G + A D SMP ++
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPSRN 576
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 137/309 (44%), Gaps = 37/309 (11%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
LS K +HS + IGV + N + Y KC ++ A+ F +E+ + V +WNS++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEK--KDVFAWNSVL 114
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
F + + M RP+ T +LS+C + + GR VH GF
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
LI MY+KC + AR +FDG + VSWTA+I+GY + G EA+++F M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ G PD +T+++ +++ Y G +
Sbjct: 235 QRVGHAPDQITLVT-----------------------------------VVNAYVALGRL 259
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
DAR+LF +P VV+W MI+G A G EA+ F ++ + L+ R + +VL A
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319
Query: 471 THAGFLEKG 479
L G
Sbjct: 320 ASLSMLNYG 328
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 8/269 (2%)
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+AL +++HS + G L + N ++ +Y KCG++D A+ F + + +W +++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
S Y G ++ F M P+ T ++S C + G+ G
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
LIDMY+KC + DAR +F VSWT +IAG +G +EA+ +F +M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
+ P+++T + V+ A G L F + NP + ++ M ++G
Sbjct: 235 QRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRGF 289
Query: 512 LKEALDF---VQSMPIKSDAGIWGTLLCA 537
+EA+ F ++ +K+ G++L A
Sbjct: 290 AEEAISFFLELKKTGLKATRSSLGSVLSA 318
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 308/599 (51%), Gaps = 20/599 (3%)
Query: 22 WNSQIREAVDK---NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
WNS I + +H + LFR M+ DI PN T I KA + L + H
Sbjct: 85 WNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHA 144
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
+VK + DI+V T++V MY K L Y F +DV L
Sbjct: 145 LVVKMSSFGDIYVDTSLVGMYCKAGLKYLYMVYYGFWLCYKKDVLRRQ-----------L 193
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ +C F + +D+V L+ A ++ L + +H + G+ V++ N
Sbjct: 194 KSSIC-FLEEKEKESDSDYVFTAVLSSLAATV-YVGLGRQIHGITVKNGLLGFVALSNAL 251
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++ Y+KC L A +F G R ++W++++ G + + +++ + M G +P
Sbjct: 252 VTMYSKCESLNEACKMFD--SSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKP 309
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T+V +L++C LV+G+ +HS + GF+ + L+ MY+K G + AR F
Sbjct: 310 SEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF 369
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + +R WT++ISGY Q D +EAL L+ M+ AG +P+ T+ S++ C LE
Sbjct: 370 DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 429
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LGK + G V + +AL MY+KCGS+ D +F P K VVSW MI+G +
Sbjct: 430 LGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLS 489
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
NG+ EAL+LF +M+ P+ VTF+ ++ AC+H GF+E+GW YF++M+ + ++P++
Sbjct: 490 HNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKV 549
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+HY+CM D+L R G+LKE +F++S I +W LL ACK H N E+G Y +L
Sbjct: 550 DHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMS 609
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L ++ YV++A IY GR V + +M+ N V K G S + + + F V D
Sbjct: 610 LGSRESSTYVQLAGIYTALGRMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGD 668
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 212/419 (50%), Gaps = 26/419 (6%)
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ + + +H I+++ + +V+ YAKC +L A+ +F+ + +DV SWN++I
Sbjct: 31 NLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLIT 90
Query: 129 GFAQMGFLEK---VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
G++Q G + V+ LF MR I + T+ G+ +A + ++ + H+ + +
Sbjct: 91 GYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMS 150
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGI-----EEGLRTVVSWNSIIGGCTYGDKFD 240
D+ V + + Y K LK +V+ G ++ LR + +SI C +K
Sbjct: 151 SFGDIYVDTSLVGMYCKAG-LKYLYMVYYGFWLCYKKDVLRRQLK-SSI---CFLEEKEK 205
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+S + Y ++LSS + GR +H + G V++ N L+
Sbjct: 206 ESDSDY-------------VFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALV 252
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
+MYSKC ++ A +FD DR ++W+AM++GY+Q G+ EA++LF M +AG P
Sbjct: 253 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEY 312
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T++ +++ C L GK ++ G + ++ AL+DMY+K G + DAR+ F L
Sbjct: 313 TIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCL 372
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
E+ V WT++I+G N + EAL L+ +M + PN T +VL+AC+ LE G
Sbjct: 373 QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 431
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 169/379 (44%), Gaps = 30/379 (7%)
Query: 167 HAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
H++H +L+ ++VH+ I G N ++ YAKC L A +F I + VV
Sbjct: 26 HSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAII--CKDVV 83
Query: 225 SWNSIIGGCTYGDKFDDS---LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
SWNS+I G + S + +R M P+ T+ + + ++ GR H
Sbjct: 84 SWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAH 143
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG--MCDRTRVSWTAMISGYAQKGD 339
+ + D+ V +L+ MY K G + ++ G +C + V + S
Sbjct: 144 ALVVKMSSFGDIYVDTSLVGMYCKAG-LKYLYMVYYGFWLCYKKDVLRRQLKSS------ 196
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
+ F E E +++S + + LG+ GL V + NA
Sbjct: 197 ------ICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNA 250
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+ MYSKC S+ +A ++F + ++ ++W+ M+ G + NGE +EA+ LF +M ++P+
Sbjct: 251 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPS 310
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA---L 516
T + VL AC+ +L +G + + K+ L + + D+ + G L +A
Sbjct: 311 EYTIVGVLNACSDICYLVEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGF 369
Query: 517 DFVQSMPIKSDAGIWGTLL 535
D +Q + D +W +L+
Sbjct: 370 DCLQ----ERDVALWTSLI 384
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
Y F +N + H +T++ L+ LV GR VH+ I G
Sbjct: 2 YPSTFQTEINPFSH---------TSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQ 52
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA---LRLFFAME 351
N L++ Y+KCG + A +F+ + + VSW ++I+GY+Q G + + ++LF M
Sbjct: 53 HANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMR 112
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
A +P+ T+ + + +G+ ++ V +L+ MY K G
Sbjct: 113 AQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 169
>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 723
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 201/589 (34%), Positives = 312/589 (52%), Gaps = 17/589 (2%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + +D + L F +++ EPN T + AC L + + IHG++
Sbjct: 102 SWNVIVFGLLDHGFEEEGLWWFSKLRVWGFEPNVSTLVLVIHACRSL--WFDGEKIHGYV 159
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++S FW VQ +++ +Y++ D L A KLFD+M +RDV SW+ +I + Q L
Sbjct: 160 IRSGFWRISSVQNSILCLYSEFDSLS-ARKLFDEMSERDVISWSVVIRSYVQSQEPVLGL 218
Query: 141 CLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 198
LF M R + D VTV + +A + + +SVH F I G D DV V N+ I
Sbjct: 219 ELFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLID 278
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K D A VF E R +VSWNSI+ G Y ++D++L +R M + D
Sbjct: 279 MYSKGYDADSAFRVFD--ETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADE 336
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+VSLL C E + + +H I G++ + +++L+ Y+ C +D AR +FD
Sbjct: 337 VTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDS 396
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + VS + MISG + G DEA+ +F M + P+ +TV+S++S C S L
Sbjct: 397 MSYKDVVSCSTMISGLGRCGRSDEAISIFCQMR---DKPNAITVISLLSACSVSAVLRTS 453
Query: 379 KWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
KW A GL N + V +++D Y+KCG+I AR F + EK++VSWT +I+ A+
Sbjct: 454 KWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAI 513
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG +AL F +M PN VT+LA L AC H G ++KG F M + Q P L
Sbjct: 514 NGLPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQ-KPSLQ 572
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCAC--KIHRNIEIGEYVAYR 553
HYSC+ D+L R G++ A++ ++++P +K+ A WG +L C ++ I E VA
Sbjct: 573 HYSCIVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILSGCRNRLKSGIITSEVVA-E 631
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ ELEP ++ Y+ ++++A W VA +R ++K V+ G S+V
Sbjct: 632 VLELEPLCSSGYLLASSVFAAEKSWVDVAMMRRLVKERNVRVVAGYSMV 680
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 230/473 (48%), Gaps = 29/473 (6%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNN-LTFPFIAKACAKLSDFLYSQM 75
S + +S+I++A + + + + ++ I+ N+ FP + KACAKLS L
Sbjct: 7 SKLQALSSKIKQASVNGKWREVVSGYSEIQSAGIQFNDPFVFPIVFKACAKLSWLLQG-- 64
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
F S + V ++ D Y KC L + FD M RD SWN ++ G GF
Sbjct: 65 ---------FESYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGF 115
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL---KSVHSFGIHIGVDADVSV 192
E+ L F +R+ G + + T++ IHA SL + +H + I G SV
Sbjct: 116 EEEGLWWFSKLRVWGFEPNVSTLV----LVIHACR-SLWFDGEKIHGYVIRSGFWRISSV 170
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ + Y++ + L +L F + E R V+SW+ +I + L ++ M+ +
Sbjct: 171 QNSILCLYSEFDSLSARKL-FDEMSE--RDVISWSVVIRSYVQSQEPVLGLELFKEMVRE 227
Query: 253 G-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDID 310
PD TV S+L +C + + GR VH I GFDL DV V N+LI MYSK D D
Sbjct: 228 AKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDAD 287
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA +FD R VSW ++++G+ DEAL +F M+ D VT++S++ C
Sbjct: 288 SAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCK 347
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
K G + N + ++L+D Y+ C + DAR +F ++ K VVS +T
Sbjct: 348 FFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCST 407
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGY 482
MI+G G EA+ +F QM + +PN +T +++L AC+ + L W +
Sbjct: 408 MISGLGRCGRSDEAISIFCQMRD---KPNAITVISLLSACSVSAVLRTSKWAH 457
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 151/320 (47%), Gaps = 9/320 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS + V +AL +FR MKK +E + +T + + C L + IH
Sbjct: 300 NIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFEHPLPCKSIH 359
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G I++ + S+ ++++D Y C +D A +FD M +DV S + MI G + G +
Sbjct: 360 GVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGRCGRSD 419
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA-DVSVCNTW 196
+ + +F MR + + +TV+ L A + L K H I G+ D+SV +
Sbjct: 420 EAISIFCQMR---DKPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISVDTSI 476
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ AYAKC + +A F I E +++VSW II D +L + M D + P
Sbjct: 477 VDAYAKCGAIDIARRTFDQITE--KSIVSWTVIISAYAINGLPDKALASFDEMKRDSYTP 534
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T ++ LS+C + +G ++ + + + ++ M S+ G+ID+A L
Sbjct: 535 NAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQKPSLQHYSCIVDMLSRAGEIDTAMELI 594
Query: 317 DGMCDRTRV---SWTAMISG 333
+ + + +W A++SG
Sbjct: 595 KNLPEDVKAGASAWGAILSG 614
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 303/576 (52%), Gaps = 6/576 (1%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
L +M+ + PN TF + A A S +H IVK+ F FV ++ MY
Sbjct: 192 LINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYL 251
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
K + + A +FD M RD +WN MI G+A +GF + +F+ MRL G++
Sbjct: 252 KSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCT 311
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ + L+ K +H + G + + + Y+KC+ + A +F + +
Sbjct: 312 ALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF-SMADAA 370
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
VV+W ++IGG + +++ + M +G RP+ T ++L+ P +L+ +
Sbjct: 371 HNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGK--PSSLLSQ--L 426
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+ I ++ SV L+ Y K G++ + +F + + V+W+AM++G AQ D
Sbjct: 427 HAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDS 486
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNA 399
++A+ +F + G P+ T S+I+ C S A +E GK A G + + V +A
Sbjct: 487 EKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSA 546
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+ MYSK G+I A ++F E+ +VSW +MI G +G+ +AL++F M L +
Sbjct: 547 LLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLD 606
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
VTF+ VL ACTHAG +E+G YFN+M K Y ++ + HYSCM DL R G +A+D +
Sbjct: 607 DVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDII 666
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
MP + IW TLL AC++HRN+E+G+ A +L L+P+ A YV ++NI+A+ G W+
Sbjct: 667 NGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWE 726
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A++R +M +VKK G S + I + +F D
Sbjct: 727 EKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGD 762
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 242/509 (47%), Gaps = 29/509 (5%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I+ +N + + N +AL LF+ + + + + LT K C L D + + +H
Sbjct: 69 ISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHC 128
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+KS F D+ V T++VDMY K + + +FD+M ++V SW +++ G+A+ G ++
Sbjct: 129 QSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDE 188
Query: 139 VLCLFYNMRLVGIQAD---FVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
V+ L M++ G+ + F TV+G L +I + VH+ + G + VCN
Sbjct: 189 VIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGV----QVHAMIVKNGFEFTTFVCN 244
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I Y K + AE VF + +R V+WN +IGG + + + M G
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMV--VRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+ T + L C L + +H + G++ + L+ YSKC +D A
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362
Query: 315 LFDGMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG---- 368
LF M D V+WTAMI G+ Q + +A+ LF M G P+ T ++++G
Sbjct: 363 LFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421
Query: 369 -CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
Q A + +++ V AL+D Y K G++ ++ +FY++P K +V+
Sbjct: 422 LLSQLHAQIIKAYYEKVPS---------VATALLDAYVKTGNVVESARVFYSIPAKDIVA 472
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC-THAGFLEKGWGYFNLM 486
W+ M+ G A + +A+++F Q+++ ++PN TF +V+ AC + A +E G
Sbjct: 473 WSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATA 532
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEA 515
K + N L S + + +KG ++ A
Sbjct: 533 VKSGKSNA-LCVSSALLTMYSKKGNIESA 560
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 200/440 (45%), Gaps = 11/440 (2%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A++LFD+ P +D++ +N ++ F++ + L LF ++ G+ D +T+ +
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + VH + G DVSV + + Y K D + +F E G++ VVSW
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFD--EMGIKNVVSWT 174
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL-VHSHGIH 286
S++ G D+ ++ M +G P+ T ++L + + E++++G + VH+ +
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGA-LADESIIEGGVQVHAMIVK 233
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
GF+ V N LI MY K + A +FD M R V+W MI GYA G E ++
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
F M AG + + C Q L K G + + AL+ YSK
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 407 CGSIGDARELF-YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
C S+ +A +LF A VV+WT MI G N +A+DLF QM +RPN T+
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL A + L + + ++ Y+ P + + + D + G + E+ S+P K
Sbjct: 414 VL-AGKPSSLLSQ--LHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK 468
Query: 526 SDAGIWGTLLCACKIHRNIE 545
D W +L R+ E
Sbjct: 469 -DIVAWSAMLTGLAQTRDSE 487
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 298/600 (49%), Gaps = 6/600 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V + +AL LFR+M+ + PN T AC DF + IH
Sbjct: 208 WNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFAR 267
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D VQT +V+MY K ++D A ++F+++ +RDV SWNAM+ A GF +K
Sbjct: 268 ELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFK 327
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV---DADVSVCNTWIS 198
F M LVG +T + + A A HL V + + G DV + ++
Sbjct: 328 CFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMN 387
Query: 199 AYAKCNDLKMA--ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
Y++C K A + + +++ WN+++ ++F+++ +R M+ G
Sbjct: 388 MYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTI 447
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D +++++ ++C +L +G+ +HS V N L++MY++ G ++ AR +F
Sbjct: 448 DTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIF 507
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M R +SWTAM+ ++Q G EALR+F ++ G P+ VT ++++ CG ++
Sbjct: 508 DAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIP 567
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
K G NV V N L+ KCGS+ + F + K VSW T IA A
Sbjct: 568 AAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANA 627
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G V ++LF M + VT + VL +C+HAG + +G+ YF M Y E
Sbjct: 628 QHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEA 687
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI-WGTLLCACKIHRNIEIGEYVAYRLF 555
HYSC+ DLL R G L+ A +FV+ +P + W TLLC CK+H ++E G R+
Sbjct: 688 EHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRIL 747
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L P S PY+ M N+YA G+W A +R M KK PG S + + G+ F V D
Sbjct: 748 GLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGD 807
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/539 (29%), Positives = 252/539 (46%), Gaps = 19/539 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ ++ W S I +A LFR M+ + PN++T+ + AC +
Sbjct: 102 QDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV---D 158
Query: 75 MIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
I + D+ V T +++ Y KC LD A+ +FD + RD A WNAMI
Sbjct: 159 TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAH 218
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
++ L LF MRL G+ + T + A H++ S +H+F + DAD V
Sbjct: 219 EQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQ 278
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ Y K + AE +F I+E R VVSWN+++ D + +R M+ G
Sbjct: 279 TALVNMYGKFGKVDDAEEIFERIQE--RDVVSWNAMLTANACNGFHDKAFKCFREMLLVG 336
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDID 310
P T V++L++C L G V + + G +DV + +++MYS+C
Sbjct: 337 ELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPK 396
Query: 311 SA---RFLFDGMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
SA L + D+ + W ++S Y + +EA +F M G D V+++++
Sbjct: 397 SAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVF 456
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
+ CG S +LE GKW + L V NAL+ MY++ GS+ DARE+F A+ + V+
Sbjct: 457 NACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVI 516
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SWT M+ + G EAL +F ++ + PN VTF AVL AC + + +
Sbjct: 517 SWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACL 576
Query: 487 TKV-YQVNPEL-NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
++ + N E+ N C LG+ G L+E +F Q M +K+ W T + A H N
Sbjct: 577 SETGFFGNVEVANGLLCT---LGKCGSLEEVANFFQVMAVKNQVS-WNTAIAANAQHGN 631
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 237/487 (48%), Gaps = 14/487 (2%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDC 107
+D + TF + CA+L D + IHG I+++ F+ ++ MY KC +
Sbjct: 34 DDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEE 93
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A +F + D+ V +W ++I A+ G ++ LF M+L G+ + VT + + A H
Sbjct: 94 ARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGH 153
Query: 168 AKHLSLLKS-VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
+ +++ V + G ++ DV V ++AY KC DL A VF GI +R W
Sbjct: 154 PWEVDTIRARVEACG---SLELDVIVATAVMNAYGKCGDLDSAWGVFDGIL--VRDAAVW 208
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N++I ++ D++L +R M G P+ T V+ L++C + +H+
Sbjct: 209 NAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARE 268
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
D D V L++MY K G +D A +F+ + +R VSW AM++ A G D+A +
Sbjct: 269 LAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKC 328
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL---KDNVMVCNALIDM 403
F M GE+P +T +++++ C + L+ G + A GG +V++ A+++M
Sbjct: 329 FREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNM 388
Query: 404 YSKCGSIGDARELFYALP----EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
YS+C S A L + +++ W T+++ N +F EA +F M+ + +
Sbjct: 389 YSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTID 448
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
V+ + V AC + LEKG +L+T+ ++ + + + + R G L++A +
Sbjct: 449 TVSLMTVFNACGSSASLEKGKWIHSLLTE-SELTRKTPVQNALVTMYARLGSLEDAREIF 507
Query: 520 QSMPIKS 526
+M ++
Sbjct: 508 DAMTTRN 514
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 16/293 (5%)
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+D D +T +L+ C L QGR +H + G ++ + L++MY KCG +
Sbjct: 33 FDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPE 92
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR +F G+ D++ V+WT++I A+ G EA LF M+ G +P+ VT ++++ CG
Sbjct: 93 EARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACG 152
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
E+ G L+ +V+V A+++ Y KCG + A +F + + W
Sbjct: 153 HP--WEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNA 210
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
MI+ + + EAL+LF QM + PN+ T +A L AC H+ F+ +++
Sbjct: 211 MISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHS-------RDFSEALRIH 263
Query: 491 QVNPELNH------YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
EL + + ++ G+ GK+ +A + + + + D W +L A
Sbjct: 264 AFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNAMLTA 315
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 145/332 (43%), Gaps = 7/332 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+I WN+ + V+ + +A +FR M + + ++ + AC + + IH
Sbjct: 413 SIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIH 472
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ +S VQ +V MYA+ L+ A ++FD M R+V SW AM+ +Q+G
Sbjct: 473 SLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNR 532
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L +F ++ L G+ + VT + A + + K V + G +V V N +
Sbjct: 533 EALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLL 592
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
KC L+ F+ + ++ VSWN+ I + ++ M +G
Sbjct: 593 CTLGKCGSLEEVANFFQVM--AVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTG 650
Query: 258 VTTVVSLLSSCVCPEALVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
T++ +LSSC + QG ++ H + YGF + + +I + S+ G ++ A
Sbjct: 651 SVTLIGVLSSCSHAGLVAQGYSYFLNMH-VDYGFPAEAEHYSCVIDLLSRAGWLEHAEEF 709
Query: 316 FDGM--CDRTRVSWTAMISGYAQKGDLDEALR 345
+ D++ W ++ G GDL+ R
Sbjct: 710 VKRLPFGDQSVFPWITLLCGCKLHGDLERGGR 741
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 301/585 (51%), Gaps = 7/585 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYS----QMI 76
WN+ I+ VD +AL +F M + + + T+P + KACA L +M+
Sbjct: 122 WNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMV 181
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
I ++FVQ +VDM+AKC LD A +F+ M RD+A+W AMI G G
Sbjct: 182 ETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNW 241
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+V+ LF +MR G D + + A A L + ++H + G D+ V N
Sbjct: 242 LEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNAL 301
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y KC ++MA+ +F + VVSW+S+I G + + S++ + MI G P
Sbjct: 302 VDMYCKCGCVEMADCLFWSTNS--KDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINP 359
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ +T+ S+L + + G+ +H I +G + V++ LI +YSK G I A +F
Sbjct: 360 NSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIF 419
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D+ W +M++GYA G D A ++ G PD VTV+S++ C Q L
Sbjct: 420 WLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLI 479
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK Y + V NAL+DMY KCG + A+E+F + E+ V++ +I+
Sbjct: 480 QGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFG 539
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ +AL F M + P++VTF+A+L C+HAG ++KG ++ M Y ++PE
Sbjct: 540 KHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEK 599
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HYSC+ DL R GKL EA F+ +M + + + G LL AC++H ++I E V R+FE
Sbjct: 600 EHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFE 659
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
P+ ++ ++NIYA G W V +RTM++ +KK G SL
Sbjct: 660 QNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNSL 704
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 216/463 (46%), Gaps = 16/463 (3%)
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
DF ++ +H ++ + +V YAK + A ++FD MP R+ +WNA+I
Sbjct: 68 DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIK 127
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G G + L +F+ M + V V G T + +L + V+
Sbjct: 128 GLVDAGRFSEALEMFWGM----VNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVET 183
Query: 189 DVSVCN---------TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
D++ N + +AKC L A VF ++ +R + +W ++IGG + +
Sbjct: 184 DIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQ--VRDLAAWTAMIGGTVHSGNW 241
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+ ++ + HM +GF D +++S+C L G +H + G D+ V N L
Sbjct: 242 LEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNAL 301
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+ MY KCG ++ A LF + VSW+++I GY+Q G + ++ LF M + G P+
Sbjct: 302 VDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNS 361
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T+ S++ + GK ++ GL+ + V +ALID+YSK G I A +F+
Sbjct: 362 STLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWL 421
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+K + W +M+AG A+NG A + ++ L+P+ VT ++VL C L +G
Sbjct: 422 TLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQG 481
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
+ K Y +N + + + D+ + G L+ A + Q M
Sbjct: 482 KELHAYVIK-YCINSVCSVNNALLDMYCKCGFLEVAKEVFQLM 523
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 144/311 (46%), Gaps = 3/311 (0%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W+S I + ++ LF M I PN+ T I + L +
Sbjct: 323 SKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKE 382
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++ FV + ++D+Y+K + A +F D+D+A WN+M+ G+A G+
Sbjct: 383 IHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGY 442
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ C ++ VG++ D VTV+ + L K +H++ I +++ SV N
Sbjct: 443 SDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNA 502
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y KC L++A+ VF+ + E R V++N +I + D +L+F+ M DG
Sbjct: 503 LLDMYCKCGFLEVAKEVFQLMTE--RNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIA 560
Query: 256 PDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T V+LLS C + +G L HS Y + + ++ +YS+CG +D A
Sbjct: 561 PDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWC 620
Query: 315 LFDGMCDRTRV 325
M + +
Sbjct: 621 FMSNMAEEPEI 631
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
CP+ + R +H+ + G ++ L+ Y+K GD+ A +FDGM R +W A
Sbjct: 66 CPD-FQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNA 124
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGK--W--FDNY 384
+I G G EAL +F+ M G V D T +I C GA+ G+ W +
Sbjct: 125 VIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETD 184
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
SG + NV V AL+DM++KCG + +AR +F ++ + + +WT MI G +G ++E
Sbjct: 185 IASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEV 244
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+DLF+ M + + V+ AC AG L+ G
Sbjct: 245 VDLFNHMRSEGFGVDSLIAATVISACGRAGELQVG 279
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 274/496 (55%), Gaps = 5/496 (1%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
S+N I FA L LF +M I+ D T+ L AA SL ++ H+
Sbjct: 120 SYNVAIRFFAS-SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALL 178
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
IG++ ++ I+ Y+ +D A VF GI R VVSWN+++ +
Sbjct: 179 GKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPT--RDVVSWNAMMKAYGRVGMNGE 236
Query: 242 SLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+R M+ +G P+V TV +L++C LV GR V ++D V + L+
Sbjct: 237 VGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALL 296
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY KCG+I AR +FD + D+ V+W AMI+GYAQ G +EA+ LF +M AG PD +
Sbjct: 297 GMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKI 356
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+ ++S C GALELG D YA GL NV V AL+DMY+KCG + A E+F +
Sbjct: 357 TLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKM 416
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKG 479
P K V SW +I G A NG EA+ F M E L+P+ +TF+ VL AC HAG ++ G
Sbjct: 417 PCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDG 476
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
+FN +T +Q+ P++ HYSCM DLL R G L+EA DF++ +P K DA + G LL AC+
Sbjct: 477 KRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACR 536
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
+N+EIGE V R+ +LEP ++ YV + IYA R D A +R +M+ V K PG
Sbjct: 537 KCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGC 596
Query: 600 SLVHINGKTCTFTVED 615
S V ++GK F D
Sbjct: 597 SWVEVSGKVLEFYAGD 612
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 198/407 (48%), Gaps = 6/407 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
+ H +L LF M ++ I P++ T PF+ A A+ ++ H + K
Sbjct: 131 SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTV 190
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MY+ D A K+FD +P RDV SWNAM+ + ++G +V +F +M G
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 153 ADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
A V + + AA + L L + V + ++ D V + + Y KC ++ A
Sbjct: 251 APNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
VF I + + +V+WN++I G +++++ + M G RPD T+ +LS+C
Sbjct: 311 VFDTIID--KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAV 368
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
AL G + + G +V V L+ MY+KCGD+D A +F M + SW A+I
Sbjct: 369 GALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALI 428
Query: 332 SGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG 389
G A G DEA++ F M G PD +T + ++S C +G ++ GK WF++
Sbjct: 429 CGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQ 488
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
+ + + ++D+ ++ G + +A + +P+K V ++A C
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I +++A+ LF M+ + P+ +T + AC+ + + G
Sbjct: 320 IVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDG 379
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ + +S+++V T +VDMYAKC LD A ++F KMP ++VASWNA+I G A G ++
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDE 439
Query: 139 VLCLFYNMR-LVGIQADFVTVMGLTQAAIHA-----------------------KHLS-- 172
+ F MR G++ D +T +G+ A +HA +H S
Sbjct: 440 AIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCM 499
Query: 173 ---LLKSVH-----SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
L +S H F I D + ++A KC ++++ E V I + L
Sbjct: 500 VDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQ-LEPTN 558
Query: 225 SWNSIIGGCTYG--DKFDDS 242
SWN ++ Y D+ DDS
Sbjct: 559 SWNYVVSSKIYASSDRLDDS 578
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 206/652 (31%), Positives = 313/652 (48%), Gaps = 54/652 (8%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK-LSDFLYSQ 74
SS ++ WN I + K A + L LF M ++ P+ TF + +AC+ + F ++
Sbjct: 73 SSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTE 132
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH I+ F S V ++D+Y+K +D A +F+++ +D SW AMI G +Q G
Sbjct: 133 QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNG 192
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ + LF M + + A + L + +H F + G+ ++ VCN
Sbjct: 193 REDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCN 252
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
++ Y++ +L AE +F + R +S+NS+I G D +L + M D
Sbjct: 253 ALVTLYSRWGNLIAAEQIFSKMHR--RDRISYNSLISGLAQRGFSDRALQLFEKMQLDCM 310
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD TV SLLS+C A +G+ +HS+ I G D+ + +L+ +Y KC DI++A
Sbjct: 311 KPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F V W M+ Y Q G+L E+ +F M+ G +P+ T S++ C GA
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGA 430
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LG+ G + NV VC+ LIDMY+K G + AR + L E+ VVSWT MIAG
Sbjct: 431 LDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG 490
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW---------GYF-- 483
+ F EAL LF +M +R + + F + + AC L +G GY
Sbjct: 491 YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSED 550
Query: 484 ---------NLMTKVYQV-------------NPELNHYSCMADLLG-------------- 507
N++ +Y PE N S A + G
Sbjct: 551 LSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLF 610
Query: 508 ----RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAA 563
+ G + + FV MPI+ DA IW TLL AC +H+NIEIGE+ A L ELEP +A
Sbjct: 611 EEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSA 670
Query: 564 PYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV ++N+YA+ G+WD R MMK VKK PG+S + + F V D
Sbjct: 671 TYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGD 722
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 242/500 (48%), Gaps = 9/500 (1%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M++ I N T+ ++ + C L ++ +H I KS F + + + ++D+Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
+D A KLFD +P +V+ WN +I G +VL LF M + D T + +A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 165 AIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
K + + +H+ IH G + VCN I Y+K + +A+LVF + L+
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL--FLKDS 178
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSW ++I G + + D+++ + M P S+LS+C E G +H
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ +G + V N L+++YS+ G++ +A +F M R R+S+ ++ISG AQ+G D A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
L+LF M+ PD VTV S++S C GA GK +Y G+ ++++ +L+D+
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y KC I A E F + VV W M+ G E+ +F QM L PN+ T+
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQS 521
++L+ CT G L+ G + T+V + + N Y C + D+ + G+L A +Q
Sbjct: 419 PSILRTCTSLGALDLGE---QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQR 475
Query: 522 MPIKSDAGIWGTLLCACKIH 541
+ + D W ++ H
Sbjct: 476 LR-EEDVVSWTAMIAGYTQH 494
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W + I + +AL LF+ M+ I +N+ F ACA + Q
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536
Query: 75 MIHGHIVKSPFWSDIFV-----QTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
IH S + D+ + ++ +Y+KC ++ A + F +MP+++V SWNAMI G
Sbjct: 537 QIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITG 596
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
++Q G+ + + LF M+ +G+ + VT +G
Sbjct: 597 YSQHGYGSEAVSLFEEMKQLGLMPNHVTFVG 627
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 308/585 (52%), Gaps = 11/585 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS-DIFVQTTM 95
+AL +RRM + P+ F C+ D Q++H I+++ DI + T +
Sbjct: 41 EALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTAL 100
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM---RLVGIQ 152
+ MYA+C L+ A K FD+M + + +WNA+I G+++ G L ++ +M G++
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D +T A +S + + + + G +D V N I+ Y+KC L+ A V
Sbjct: 161 PDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F ++ R V++WN++I G +L ++ M + +P+V T + LL++C E
Sbjct: 221 FDRLKN--RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLE 278
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRVSWTAMI 331
L QGR +H +G++ D+ + N L++MY+KC ++ AR +F+ + R ++W +I
Sbjct: 279 DLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILI 338
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
Y Q G +AL +F M+ P+ +T+ +++S C GA GK SG K
Sbjct: 339 VAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCK 398
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+V++ N+L++MY++CGS+ D +F A+ +K++VSW+T+IA A +G L+ F ++
Sbjct: 399 ADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWEL 458
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
++ L + VT ++ L AC+H G L++G F M + + P+ H+ CM DLL R G+
Sbjct: 459 LQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGR 518
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE-MAN 570
L+ A + + MP DA W +LL CK+H + + VA +LFELE V ++N
Sbjct: 519 LEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSN 578
Query: 571 IYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+YA GRWD V R R +K PG S + IN F D
Sbjct: 579 VYAEAGRWDDV---RKTRNRRAARKNPGCSYIEINDTVHEFVAGD 620
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 231/458 (50%), Gaps = 15/458 (3%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD--- 154
MY KC + A +F + + SW ++ FA+ G + L + M L G++ D
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAYAKCNDLKMAELVF 213
FV +G+ ++ K LL H+ + ++ D+ + I+ YA+C DL++A F
Sbjct: 61 FVVAIGVCSSSKDLKQGQLL---HAMILETQLLEFDIILGTALITMYARCRDLELARKTF 117
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY---DGFRPDVTTVVSLLSSCVC 270
E G +T+V+WN++I G + +L Y+ M+ +G +PD T S L +C
Sbjct: 118 D--EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSV 175
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
+ QGR + + + G+ D V N LI+MYSKCG ++SAR +FD + +R ++W M
Sbjct: 176 VGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTM 235
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
ISGYA++G +AL LF M P++VT + +++ C LE G+ G
Sbjct: 236 ISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGY 295
Query: 391 KDNVMVCNALIDMYSKC-GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ ++++ N L++MY+KC S+ +AR++F L + V++W +I G+ +ALD+F
Sbjct: 296 ESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFK 355
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
QM ++ PN +T VL AC G +G L+ + ++ + + ++ R
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS-GRCKADVVLENSLMNMYNRC 414
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
G L + + ++ KS W TL+ A H + G
Sbjct: 415 GSLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTG 451
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R+ + WN I V +A AL +F++M+ ++ PN +T + ACA L +
Sbjct: 327 RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGK 386
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H I +D+ ++ ++++MY +C LD +F + D+ + SW+ +I +AQ G
Sbjct: 387 AVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----GIHIGVDADV 190
L F+ + G+ AD VT++ A H L + V SF G H G+ D
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK--EGVQSFLSMVGDH-GLAPDY 503
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ ++ L+ AE + + L V+W S++ GC
Sbjct: 504 RHFLCMVDLLSRAGRLEAAENLIHDM-PFLPDAVAWTSLLSGC 545
>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
Length = 701
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 200/591 (33%), Positives = 319/591 (53%), Gaps = 27/591 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V +E A+LL R M +N + N T I ACA++S + IHG +
Sbjct: 129 SWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMV 188
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK---MPDRDVASWNAMIVGFAQMGFLE 137
+K+ + D V+ ++ Y ++ + K+F++ + +R + W+A I G + L
Sbjct: 189 LKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLR 246
Query: 138 KVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
V L M G++ + + +V + L HS I G + V +
Sbjct: 247 SVQ-LLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQL------HSSAIKEGFIHGILVGS 299
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDG 253
+ Y++C++++ + VF ++E R VSW +++ G T+G + L F R+MI DG
Sbjct: 300 ALSTMYSRCDNVQDSYKVFEEMQE--RDGVSWTAMVAGFATHGHSVEAFLTF-RNMILDG 356
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINT-LISMYSKCGDIDS 311
F+PD ++ ++LS+C PE L++G+ VH H + YG + + IN ISMYSKC + +
Sbjct: 357 FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYG---ETTFINDCFISMYSKCQGVQT 413
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR +FD + +V W++MISGYA G +EA+ LF M AA D S++S C
Sbjct: 414 ARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 473
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
K YA G+ + V ++L+ +YS+ G++ D+R++F + +V+WTT+
Sbjct: 474 IARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTI 533
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G A +G AL +F M++L +RP+ V ++VL AC+ G +E+G+ YFN M Y
Sbjct: 534 IDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYG 593
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V PEL HY CM DLLGR G+L EA FV SMP+K D +W TLL AC++H + +G +V
Sbjct: 594 VEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLGRFVE 653
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
++ E + + + ++NI A G W+ VA +R MK V K PG S+V
Sbjct: 654 NKIRE-GNYDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 701
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 248/561 (44%), Gaps = 43/561 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + AV E A+ +FR M EPN+ T+ ACA + + +HG ++
Sbjct: 29 WNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVL 88
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D+FV T++V+MYAKC + A + F +MP R+V SW I GF Q +
Sbjct: 89 RRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAML 148
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G+ + T + A + +H + + D V IS Y
Sbjct: 149 LLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYT 208
Query: 202 KCNDLKMAELVFRGIEEGLRTVVS-WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++++E VF E G + S W++ I G + S+ R M + G RP+
Sbjct: 209 NFGFIELSEKVFE--EAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKC 265
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+ SS ++ G +HS I GF + V + L +MYS+C ++ + +F+ M
Sbjct: 266 YASVFSSV---NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQ 322
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R VSWTAM++G+A G EA F M G PD V++ +++S C + L GK
Sbjct: 323 ERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKE 382
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + + + I MYSKC + AR +F A P K V W++MI+G A NG
Sbjct: 383 VHGHTLR-VYGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGC 441
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACT----------------HAGFLEKGWGYFN 484
EA+ LF M+ +R + ++L C AG L +
Sbjct: 442 GEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSD-QSVSS 500
Query: 485 LMTKVYQVN---------------PELNHYSCMADLLGRKGKLKEAL---DFVQSMPIKS 526
+ KVY + P+L ++ + D + G + AL D + + ++
Sbjct: 501 SLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRP 560
Query: 527 DAGIWGTLLCACKIHRNIEIG 547
D + ++L AC + +E G
Sbjct: 561 DTVVLVSVLSACSRNGLVEQG 581
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 197/442 (44%), Gaps = 10/442 (2%)
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
MVD+ AK RL A ++F WNA + G + G + +F +M + +
Sbjct: 1 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T G A + LS+ ++VH + + DV V + ++ YAKC D+ A F
Sbjct: 61 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ +R VVSW + I G D+ ++ R M+ +G + T S+L +C +
Sbjct: 121 RMP--VRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMV 178
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVSWTAMISG 333
+ +H + LD V LIS Y+ G I+ + +F+ R W+A ISG
Sbjct: 179 REASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISG 238
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
+ L +++L M G P+ S+ S ++E G + A G
Sbjct: 239 VSNH-SLLRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIEFGGQLHSSAIKEGFIHG 294
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
++V +AL MYS+C ++ D+ ++F + E+ VSWT M+AG A +G VEA F M+
Sbjct: 295 ILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMIL 354
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
+P+ V+ A+L AC L KG +VY +N C + + ++
Sbjct: 355 DGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFIN--DCFISMYSKCQGVQ 412
Query: 514 EALDFVQSMPIKSDAGIWGTLL 535
A + P K D +W +++
Sbjct: 413 TARRIFDATPRK-DQVMWSSMI 433
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 287/561 (51%), Gaps = 3/561 (0%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
T + + A+ + + +H +++ + F+ +++Y+KC LD KLFDKM
Sbjct: 77 TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKM 136
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
R++ SW ++I GFA ++ L F MR+ G A + + QA +
Sbjct: 137 SQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGT 196
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
VH + G ++ V + Y+KC +L A F E + V W S+I G
Sbjct: 197 QVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFE--EMPCKDAVLWTSMIDGFVK 254
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
F +L Y M+ D D + S LS+C +A G+ +H+ + GF+ + +
Sbjct: 255 NGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFI 314
Query: 296 INTLISMYSKCGDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
N L MYSK GD+ SA +F D + VS TA+I GY + +++AL F + G
Sbjct: 315 GNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRG 374
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P+ T S+I C LE G K + V + L+DMY KCG +
Sbjct: 375 IEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSI 434
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+LF + ++W T++ + +G A++ F+ M+ L+PN VTF+ +L+ C+HAG
Sbjct: 435 QLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAG 494
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+E G YF+ M K+Y V P+ HYSC+ DLLGR GKLKEA DF+ +MP + + W +
Sbjct: 495 MVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSF 554
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L ACKIH ++E ++ A +L +LEP ++ +V ++NIYA +W+ V +LR M+K +
Sbjct: 555 LGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMN 614
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K PG S V I KT F VED
Sbjct: 615 KLPGYSWVDIRNKTHVFGVED 635
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 200/436 (45%), Gaps = 3/436 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I + +AL F +M+ + +AC L + +H +V
Sbjct: 144 WTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVV 203
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F ++FV + + DMY+KC L A K F++MP +D W +MI GF + G +K L
Sbjct: 204 KCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALT 263
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ M + D + A K S KS+H+ + +G + + + N Y+
Sbjct: 264 AYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYS 323
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K D+ A VF+ I ++VS +II G D+ + +L+ + + G P+ T
Sbjct: 324 KSGDMVSASNVFQ-IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTF 382
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
SL+ +C L G +H + + F D V +TL+ MY KCG D + LFD + +
Sbjct: 383 TSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIEN 442
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
++W ++ ++Q G A+ F M G P+ VT ++++ GC +G +E G +
Sbjct: 443 PDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 502
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
F + G+ + +ID+ + G + +A + +P E V W + + C ++G
Sbjct: 503 FSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHG 562
Query: 440 EFVEALDLFHQMMELD 455
+ A ++M+L+
Sbjct: 563 DMERAKFAADKLMKLE 578
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 177/385 (45%), Gaps = 7/385 (1%)
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+D TV L Q K L+ K +H+ I G + + N +++ Y+KC +L +
Sbjct: 73 SDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKL 132
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + R +VSW SII G + +F ++L+ + M +G + S+L +C
Sbjct: 133 FDKMSQ--RNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLG 190
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
A+ G VH + GF ++ V + L MYSKCG++ A F+ M + V WT+MI
Sbjct: 191 AIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMID 250
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G+ + GD +AL + M D + S +S C A GK G +
Sbjct: 251 GFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEY 310
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ NAL DMYSK G + A +F + ++VS T +I G + +AL F +
Sbjct: 311 ETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDL 370
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKG 510
+ PN TF ++++AC + LE G + K ++ +P ++ S + D+ G+ G
Sbjct: 371 RRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS--STLVDMYGKCG 428
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLL 535
++ + D W TL+
Sbjct: 429 LFDHSIQLFDEIE-NPDEIAWNTLV 452
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 12/253 (4%)
Query: 242 SLNFYRHMIYDGFR-PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
S +F +++ G + D TV L+ + + L +G+ +H+ I G + + N +
Sbjct: 58 SFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFL 117
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
++YSKCG++D LFD M R VSWT++I+G+A EAL F M GE+
Sbjct: 118 NLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQF 177
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
+ S++ C GA++ G G + V + L DMYSKCG + DA + F +
Sbjct: 178 ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEM 237
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT--------- 471
P K V WT+MI G NG+F +AL + +M+ D+ ++ + L AC+
Sbjct: 238 PCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGK 297
Query: 472 --HAGFLEKGWGY 482
HA L+ G+ Y
Sbjct: 298 SLHATILKLGFEY 310
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 201/622 (32%), Positives = 313/622 (50%), Gaps = 30/622 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS--DFLY-SQMIH 77
WNS I E A+ FR M EP++ T +A AC+ L D L+ + IH
Sbjct: 80 SWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIH 139
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G + W F ++ MYAK RLD A L DRD+ +WN+MI F+Q
Sbjct: 140 GCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFM 198
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTW 196
+ L M L G++ D VT + A H L K +H++ + V + V +
Sbjct: 199 EALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSAL 258
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYDGFR 255
+ Y C ++ LVF + + R + WN++I G + + +L + M G
Sbjct: 259 VDMYCNCGQVESGRLVFDSVLD--RKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLY 316
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
+ TT+ S++ + V E + + +H + I G + + + N LI MYS+ GDI +++ +
Sbjct: 317 SNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRI 376
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV----------------PDL 359
FD M DR VSW +I+ Y G +AL L M+ E P+
Sbjct: 377 FDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNS 436
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+T+++++ GC AL GK YA L V V +AL+DMY+KCG + AR +F
Sbjct: 437 ITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQ 496
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL-----DLRPNRVTFLAVLQACTHAG 474
+P + V++W +I ++G+ E+L+LF M+ +++P VTF+A+ +C+H+G
Sbjct: 497 MPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSG 556
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWGT 533
+++G F+ M + + P +HY+C+ DL+GR GK++EA V +MP D G W +
Sbjct: 557 MVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSS 616
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL AC+I+ NIEIGE A L +L+P A+ YV ++NIY+ G WD NLR MK V
Sbjct: 617 LLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGV 676
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
KK PG S + + F D
Sbjct: 677 KKEPGCSWIEYGDEVHKFLAGD 698
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 251/518 (48%), Gaps = 38/518 (7%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPF--WSDIFVQTTMVDMYAKCDRLDCAY 109
P+N FP + KA A + + + IH H+ K + +S + + T+V+MY KC L AY
Sbjct: 8 PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
K+FD++ +RD SWN++I + E + F M + G + T++ + A + +
Sbjct: 68 KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLR 127
Query: 170 H---LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
L L K +H G S N ++ YAK L A+ + E+ R +V+W
Sbjct: 128 KRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFED--RDLVTW 184
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
NS+I + ++F ++L F R M+ +G +PD T S+L +C + L G+ +H++ +
Sbjct: 185 NSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALR 244
Query: 287 YGFDLDVSVINT-LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
++ S + + L+ MY CG ++S R +FD + DR W AMI+GYAQ ++AL
Sbjct: 245 TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALM 304
Query: 346 LFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
LF ME AAG + T+ S++ + + + Y GL+ N + NALIDMY
Sbjct: 305 LFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMY 364
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD--------- 455
S+ G I ++ +F ++ ++ +VSW T+I + G +AL L H+M ++
Sbjct: 365 SRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDY 424
Query: 456 -------LRPNRVTFLAVLQACTHAGFLEKG-----WGYFNLMTKVYQVNPELNHYSCMA 503
+PN +T + VL C L KG + NL+ V S +
Sbjct: 425 NDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVG------SALV 478
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
D+ + G L A MPI+ + W ++ A +H
Sbjct: 479 DMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMH 515
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 218/451 (48%), Gaps = 28/451 (6%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
++ + WNS I +AL+ R M ++P+ +TF + AC+ L
Sbjct: 175 LFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRT 234
Query: 73 SQMIHGHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH + +++ + FV + +VDMY C +++ +FD + DR + WNAMI G+A
Sbjct: 235 GKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYA 294
Query: 132 QMGFLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
Q EK L LF M G+ ++ T+ + A + + +S + +H + I G++ +
Sbjct: 295 QSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNR 354
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM- 249
+ N I Y++ D+K ++ +F +E+ R +VSWN+II + D+L M
Sbjct: 355 YLQNALIDMYSRMGDIKTSKRIFDSMED--RDIVSWNTIITSYVICGRSSDALLLLHEMQ 412
Query: 250 ------IYDG---------FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
YDG F+P+ T++++L C AL +G+ +H++ I V+
Sbjct: 413 RIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVT 472
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-- 352
V + L+ MY+KCG ++ AR +FD M R ++W +I Y G E+L LF M A
Sbjct: 473 VGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEG 532
Query: 353 --AGEV-PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
GEV P VT +++ + C SG ++ G F G++ ++D+ + G
Sbjct: 533 AKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAG 592
Query: 409 SIGDARELFYALPE--KTVVSWTTMIAGCAL 437
+ +A L +P V +W++++ C +
Sbjct: 593 KVEEAYGLVNTMPSGFDKVGAWSSLLGACRI 623
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 121/236 (51%), Gaps = 6/236 (2%)
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKC 306
MI GF PD ++L + + L G+ +H+H +G+ V++ NTL++MY KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + A +FD + +R +VSW ++IS + + + A++ F M G P T++SM
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 367 SGCG---QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
C + L LGK C NAL+ MY+K G + DA+ L ++
Sbjct: 121 LACSNLRKRDGLWLGKQIHG-CCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+V+W +MI+ + N F+EAL M+ ++P+ VTF +VL AC+H L G
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTG 235
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/515 (37%), Positives = 273/515 (53%), Gaps = 23/515 (4%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLL-KSV 177
SW I A G + LF MR A +V AA+ A LS L S+
Sbjct: 16 SWAHQIRMAAAQGHFRDAISLFLRMR--ACAAPRSSVPASLPAALKSCAALGLSALGASL 73
Query: 178 HSFGIHIGVDADVSVCNTWISAYAK--CNDLKMA--------------ELVFRGIEEGL- 220
H+ I G AD N ++ Y K C+ L E V + +E +
Sbjct: 74 HALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMIE 133
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R VVSWN+++ GC + ++L R M +GFRPD T+ S+L + +G V
Sbjct: 134 RDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEV 193
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H + GFD DV V ++LI MY+ C D + +FD + R + W ++++G AQ G +
Sbjct: 194 HGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSV 253
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
+EAL +F M G P VT S+I CG +L GK Y GG +DNV + ++L
Sbjct: 254 EEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSL 313
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
IDMY KCG I A +F + VVSWT MI G AL+G EAL LF +M + +PN
Sbjct: 314 IDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNH 373
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+TFLAVL AC+HAG ++KGW YF M+ Y + P L H + +AD+LGR G+L EA +F+
Sbjct: 374 ITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFIS 433
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
M IK A +W TLL AC++H+N + E VA ++ ELEP S +V ++N+Y+ GRW+
Sbjct: 434 KMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNE 493
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A+LR M++ +KK P S + + K F D
Sbjct: 494 AAHLRKSMRKKGMKKDPACSWIEVKNKLHVFVAHD 528
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 223/463 (48%), Gaps = 31/463 (6%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNL--TFPFIAKACAKLSDFLYSQMIHG 78
W QIR A + A+ LF RM+ +++ + P K+CA L +H
Sbjct: 16 SWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSALGASLHA 75
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY----------------------KLFDKMP 116
++S ++D F ++++Y K L C+Y K+FD+M
Sbjct: 76 LAIRSGAFADRFTANALLNLYCK---LPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMI 132
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+RDV SWN +++G A+ G + L L M G + D T+ + +
Sbjct: 133 ERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSE 192
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH F + G D DV V ++ I YA C + VF + +R + WNS++ GC
Sbjct: 193 VHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLP--VRDPILWNSVLAGCAQN 250
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+++L +R M+ G RP T SL+ C +L G+ +H++ I GF+ +V +
Sbjct: 251 GSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFIS 310
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
++LI MY KCG+I A +FD MC VSWTAMI GYA G EAL LF ME
Sbjct: 311 SSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAK 370
Query: 357 PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ +T L++++ C +G ++ G K+F + + G+ + C AL D+ + G + +A
Sbjct: 371 PNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYN 430
Query: 416 LFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+ K S W+T++ C ++ + A ++ ++MEL+ R
Sbjct: 431 FISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPR 473
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC--AKLSD--FL 71
S + W + I A +AL+LF RM+ + +PN++TF + AC A L D +
Sbjct: 335 SPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWK 394
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS-WNAMI 127
Y + + H P + D+ + LD AY KM + AS W+ ++
Sbjct: 395 YFKSMSDHYGIVPTLEHC---AALADILGRAGELDEAYNFISKMQIKPTASVWSTLL 448
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 307/585 (52%), Gaps = 11/585 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS-DIFVQTTM 95
+AL +RRM + P+ F C+ D Q++H I+++ DI + T +
Sbjct: 41 EALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTAL 100
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM---RLVGIQ 152
+ MYA+C L+ A K FD+M + + +WNA+I G+++ G L ++ +M G++
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D +T A +S + + + + G +D V N I+ Y+KC L+ A V
Sbjct: 161 PDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F ++ R V++WN++I G +L ++ M + +P+V T + LL++C E
Sbjct: 221 FDRLKN--RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLE 278
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARFLFDGMCDRTRVSWTAMI 331
L QGR +H G++ D+ + N L++MY+KC ++ AR +F+ M R ++W +I
Sbjct: 279 DLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILI 338
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
Y Q G +AL +F M+ P+ +T+ +++S C GA GK SG K
Sbjct: 339 VAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCK 398
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+V++ N+L++MY++CGS+ D +F A+ +K++VSW+T+IA A +G L+ F ++
Sbjct: 399 ADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWEL 458
Query: 452 MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
++ L + VT ++ L AC+H G L++G F M + + P+ H+ CM DLL R G+
Sbjct: 459 LQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGR 518
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE-MAN 570
L+ A + + MP DA W +LL CK+H + + VA +LFELE V ++N
Sbjct: 519 LEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSN 578
Query: 571 IYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+YA GRWD V R R +K PG S + IN F D
Sbjct: 579 VYAEAGRWDDVRKTRN---RRAARKNPGCSYIEINDTVHEFVAGD 620
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 231/458 (50%), Gaps = 15/458 (3%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD--- 154
MY KC + A +F + + SW ++ FA+ G + L + M L G++ D
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISAYAKCNDLKMAELVF 213
FV +G+ ++ K LL H+ + ++ D+ + I+ YA+C DL++A F
Sbjct: 61 FVVAIGVCSSSKDLKQGQLL---HAMILETRLLEFDIILGTALITMYARCRDLELARKTF 117
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY---DGFRPDVTTVVSLLSSCVC 270
E G +T+V+WN++I G + +L Y+ M+ +G +PD T S L +C
Sbjct: 118 D--EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTV 175
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
+ QGR + + + G+ D V N LI+MYSKCG ++SAR +FD + +R ++W M
Sbjct: 176 VGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTM 235
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
ISGYA++G +AL LF M P++VT + +++ C LE G+ G
Sbjct: 236 ISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGY 295
Query: 391 KDNVMVCNALIDMYSKC-GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ ++++ N L++MY+KC S+ +AR++F + + V++W +I G+ +ALD+F
Sbjct: 296 ESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFK 355
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
QM ++ PN +T VL AC G +G L+ + ++ + + ++ R
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS-GRCKADVVLENSLMNMYNRC 414
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
G L + + ++ KS W TL+ A H + G
Sbjct: 415 GSLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTG 451
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R+ + WN I V +A AL +F++M+ ++ PN +T + ACA L +
Sbjct: 327 RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGK 386
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H I +D+ ++ ++++MY +C LD +F + D+ + SW+ +I +AQ G
Sbjct: 387 AVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----GIHIGVDADV 190
L F+ + G+ AD VT++ A H L + V +F G H G+ D
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK--EGVQTFLSMVGDH-GLAPDY 503
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ ++ L+ AE + + L V+W S++ GC
Sbjct: 504 RHFLCMVDLLSRAGRLEAAENLIHDM-PFLPDAVAWTSLLSGC 545
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 300/598 (50%), Gaps = 6/598 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W + I V ++ +A +LF+++ ++ +PN ++F I AC +D
Sbjct: 214 RERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGL 273
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +I ++ ++ V ++ MYA+C L A ++FD + + SWNAMI G+ + G
Sbjct: 274 KLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-G 332
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
F+E+ LF +M+ G Q D T L L+ K +HS + +ADV+V
Sbjct: 333 FMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVAT 392
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
IS YAKC L+ A VF + E + VSWN+ I C ++ ++ M D
Sbjct: 393 ALISMYAKCGSLEEARKVFNQMPE--KNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDV 450
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T ++LL+SC PE +GR +H +G + V N LISMY +CG + AR
Sbjct: 451 IPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADARE 510
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F + R SW AMI+ Y Q G A LF ++ G D T ++++
Sbjct: 511 VFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLED 570
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+ G+ GL+ ++ + LI MYSKCGS+ DA +F + EK VV W M+A
Sbjct: 571 LDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAA 630
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
+ +AL LF QM + P+ T+ +VL AC G +E G F+ K +
Sbjct: 631 YNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHG-KKFHTQLKEAAMET 689
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HY+CM LGR LKEA +F++ + +SDA +W +LL AC+IH N+ + E L
Sbjct: 690 DTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHL 749
Query: 555 FELEPHSAAPYVE-MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+++ S+ E + NIYA GRW+ V+ ++ M+ + P + +N + TF
Sbjct: 750 LDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLA-PKSCTIEVNSEFHTF 806
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 261/509 (51%), Gaps = 29/509 (5%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
+ K ++ N + + C + + +H H+ + F DI++ ++ MY+KC
Sbjct: 42 LGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGS 101
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI---QADFVTVMGL 161
++ A +F M D+DV SWNAMI G+A G ++ + LFY M+ G+ Q F++++
Sbjct: 102 IEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSA 161
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
Q I L + +HS G ++DV+V I+ Y KC L++A VF + E R
Sbjct: 162 CQTPI---VLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRE--R 216
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSW ++I G ++ ++ +I G +P+ + S+L +C P L QG +H
Sbjct: 217 NVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLH 276
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
++ G + +V V N LISMY++CG + +AR +FD + RVSW AMI+GY + G ++
Sbjct: 277 AYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFME 335
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EA RLF M+ G PD T S+++ C L GK + + +V V ALI
Sbjct: 336 EAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALI 395
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
MY+KCGS+ +AR++F +PEK VSW IA C +G EA +F QM D+ P+ V
Sbjct: 396 SMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHV 455
Query: 462 TFLAVLQACTHAGFLEKG---------WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
TF+ +L +CT E+G WG +++ N ++ Y GR GKL
Sbjct: 456 TFITLLNSCTSPEDFERGRYIHGKIDQWG---MLSNNLVANALISMY-------GRCGKL 505
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+A + + + D G W ++ A H
Sbjct: 506 ADAREVFYRIR-RRDLGSWNAMIAAYVQH 533
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 292/585 (49%), Gaps = 13/585 (2%)
Query: 11 NKIYRS---STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
N +++S + WN+ I +A+ LF +M++ ++PN +F I AC
Sbjct: 106 NNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTP 165
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ + IH HI K+ + SD+ V T +++MY KC L+ A K+F++M +R+V SW AMI
Sbjct: 166 IVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 225
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ Q G ++ LF + G Q + V+ + A + L +H++ G++
Sbjct: 226 SGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLE 285
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF-DDSLNFY 246
+V V N IS YA+C L A VF + R VSWN++I G YG+ F +++ +
Sbjct: 286 QEVLVGNALISMYARCGSLANARQVFDNLRSPNR--VSWNAMIAG--YGEGFMEEAFRLF 341
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
R M GF+PD T SLL+ C L +G+ +HS + ++ DV+V LISMY+KC
Sbjct: 342 RDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKC 401
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G ++ AR +F+ M ++ VSW A I+ + G EA ++F M +PD VT ++++
Sbjct: 402 GSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLL 461
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
+ C E G++ G+ N +V NALI MY +CG + DARE+FY + + +
Sbjct: 462 NSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLG 521
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW MIA +G A DLF + + ++ TF+ VL+A + L+ G L+
Sbjct: 522 SWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLV 581
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK--IHRNI 544
K + ++ + + + + G L++A +++ K D W +L A H
Sbjct: 582 EKA-GLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEK-DVVCWNAMLAAYNHSDHGQD 639
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
+ + RL + P SA Y + N A G + T +K
Sbjct: 640 ALKLFQQMRLEGVNPDSAT-YTSVLNACARLGAIEHGKKFHTQLK 683
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 211/407 (51%), Gaps = 9/407 (2%)
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
G+QA+ Q + AK L+ K VH + D+ + N IS Y+KC ++ A
Sbjct: 46 GVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDA 105
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
VF+ +E+ + VVSWN++I G + ++++ + M +G +P+ + +S+LS+C
Sbjct: 106 NNVFQSMED--KDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQ 163
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
P L G +HSH G++ DV+V LI+MY KCG ++ AR +F+ M +R VSWTA
Sbjct: 164 TPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTA 223
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
MISGY Q GD EA LF + +G P+ V+ S++ C LE G Y G
Sbjct: 224 MISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAG 283
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
L+ V+V NALI MY++CGS+ +AR++F L VSW MIAG G EA LF
Sbjct: 284 LEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYG-EGFMEEAFRLFR 342
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
M + +P+R T+ ++L C L +G + + + ++ + + + +
Sbjct: 343 DMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRT-AWEADVTVATALISMYAKC 401
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
G L+EA MP K +A W + C H + E A+++F+
Sbjct: 402 GSLEEARKVFNQMPEK-NAVSWNAFIACCCRHGS----EKEAFQVFK 443
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 298/556 (53%), Gaps = 13/556 (2%)
Query: 24 SQIREAVDKNEAH--KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
S I A + ++H AL L+R M + P L + +AC L++ +++H H++
Sbjct: 386 STIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVI 445
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S D+ V ++V+MYAKC + A K+FD++ +R WN+MI + + E L
Sbjct: 446 ESGLEGDL-VGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEKDPHE-ALH 503
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ G+ D +T M + A ++A L +++H+ + G ADV V + YA
Sbjct: 504 LFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYA 563
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + R VVSWN++I G + +++ M +G RPD T
Sbjct: 564 KCGSLGEARGVFDSMV--FRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATF 621
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
SLL++C P LV GR +HS + D+ ++ LI+MY+ CG +++AR +FD +
Sbjct: 622 TSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFS 681
Query: 322 RTRVS------WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
+R WT+MI+ Y Q G+ +AL L+ M + D VT +S+++ C L
Sbjct: 682 NSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDL 741
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
G+ GL +V V N+++ MY KCGS +A +F K + WT +IA
Sbjct: 742 RQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASY 801
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
A +G +AL +F ++ + + + +TF+A+L AC+H G +E+G +F M ++ + P
Sbjct: 802 ARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAEL-GIEPN 860
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
+ H+SC+ DLL R G L A +F+ MP+ ++ + LL AC++H ++E VA +L
Sbjct: 861 MEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEKLE 920
Query: 556 ELEPHSAAPYVEMANI 571
L+P S APYV ++NI
Sbjct: 921 ALDPESEAPYVTLSNI 936
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 218/439 (49%), Gaps = 6/439 (1%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M + I P+ + + AC KL ++I + + DI V+ ++MY KC
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
LD A + F +M RDV SW MI ++Q G L LF M L G + VT + +
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL-VFRGIEEGLRTV 223
L + +H+ + +++ V V N+ + Y++C + + + F ++ R V
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKR--RDV 178
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSW +IG + KF S+ +R M+ +G P+ T VS+LS C P L QGR +H+
Sbjct: 179 VSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHAL 238
Query: 284 GIHYGFD--LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ + LD+ V+N I+MY KCG +D A F M R VSWT MI Y+Q G
Sbjct: 239 VVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFS 298
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
+L+LF M G P+ VT +S++SGC LE G+ L+ +V+V N+L+
Sbjct: 299 LSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLL 358
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV-EALDLFHQMMELDLRPNR 460
MYS+C S D+R LF + + VSW+T+I C+ +AL L+ M+ + P
Sbjct: 359 GMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKT 418
Query: 461 VTFLAVLQACTHAGFLEKG 479
+ VL+AC L+ G
Sbjct: 419 LALSMVLEACGSLAELKGG 437
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 159/530 (30%), Positives = 258/530 (48%), Gaps = 25/530 (4%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
+L LFR M PN++TF I C S + IH +V+S S + V +++
Sbjct: 300 SLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLG 359
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM-GFLEKVLCLFYNMRLVGIQADFV 156
MY++C + + LFD+M RD SW+ +I+ ++ L L+ +M G+ +
Sbjct: 360 MYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTL 419
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+ + +A L K VH+ I G++ D+ V + ++ YAKC + A VF I
Sbjct: 420 ALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFDRI 478
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R+ + WNS+I D + +L+ +R M +G PD T +++L++CV L
Sbjct: 479 NN--RSRILWNSMITAYQEKDPHE-ALHLFREMQPEGVSPDRITFMTVLNACVNAADLEN 535
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +H+ + GF DV V L +MY+KCG + AR +FD M R VSW MI+ Y Q
Sbjct: 536 GRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQ 595
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
D + A+ L +AM+ G PD T S+++ C L G+ ++ L++++++
Sbjct: 596 GRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVM 655
Query: 397 CNALIDMYSKCGSIGDARELFYAL------PEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
LI MY+ CGS+ +ARE+F + + + WT+MI +GE+ +AL+L+ Q
Sbjct: 656 VTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQ 715
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF------NLMTKVYQVNPELNHYSCMAD 504
M + +RVTF++VL AC H L +G L T V N + Y
Sbjct: 716 MHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMY----- 770
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
G+ G EA + K D +W L+ + H + E ++ RL
Sbjct: 771 --GKCGSFDEASIVFEKTKHK-DISLWTALIASYARHGHGEQALWIFRRL 817
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 250/506 (49%), Gaps = 14/506 (2%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
+L LFR M PN++TF I C S + IH +V+S S + V +++
Sbjct: 95 SLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLG 154
Query: 98 MYAKCDRL-DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY++C D + F +M RDV SW MI ++Q G + LF M L G + V
Sbjct: 155 MYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSV 214
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA--DVSVCNTWISAYAKCNDLKMAELVFR 214
T + + L + +H+ + +++ D+ V N I+ Y KC L A F
Sbjct: 215 TFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFA 274
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
++ R VVSW +IG + KF SL +R M+ +G P+ T VS+LS C P L
Sbjct: 275 RMKR--RDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLL 332
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
QGR +H+ + + V V N+L+ MYS+C + +R LFD M R VSW+ +I
Sbjct: 333 EQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMAC 392
Query: 335 AQK-GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
+++ +AL L+ +M G +P + + ++ CG L+ GK + GL+ +
Sbjct: 393 SREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGD 452
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+V +L++MY+KCG++G+AR++F + ++ + W +MI EAL LF +M
Sbjct: 453 -LVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEKDPH-EALHLFREMQP 510
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN--PELNHYSCMADLLGRKGK 511
+ P+R+TF+ VL AC +A LE G + T++ ++ + + ++ + G
Sbjct: 511 EGVSPDRITFMTVLNACVNAADLENGR---TIHTRIVDSGFAADVRVATALFNMYAKCGS 567
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCA 537
L EA SM + D W ++ A
Sbjct: 568 LGEARGVFDSMVFR-DVVSWNNMIAA 592
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I E KAL L+ +M +E + +TF + ACA LSD Q IH ++
Sbjct: 693 WTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVM 752
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D+ V ++V MY KC D A +F+K +D++ W A+I +A+ G E+ L
Sbjct: 753 RRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALW 812
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F +R GI+ +T + + A H + + +G++ ++ + + A
Sbjct: 813 IFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLA 872
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC-TYGD 237
+ L AE + T+V +++ C +GD
Sbjct: 873 RAGHLHTAEEFLSRMPVAANTIV-LTALLAACRVHGD 908
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I+ W + I +AL +FRR++++ IE +NLTF + AC+ +
Sbjct: 791 ISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFA 850
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
+ + ++ + +VD+ A+ L A + +MP
Sbjct: 851 SMAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMP 888
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 201/626 (32%), Positives = 318/626 (50%), Gaps = 39/626 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL-YSQMIHGHI 80
WNS I E +L LFR M +++P + T +A AC+ + + + +H +
Sbjct: 401 WNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYT 460
Query: 81 VKSPFWSDI--FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ D+ + +V MYA+ R++ A LF +D+ SWN +I +Q E+
Sbjct: 461 LRN---GDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEE 517
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT-WI 197
L Y M + G++ D VT+ + A + L + + +H + + G + S T +
Sbjct: 518 ALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALV 577
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRP 256
Y C K LVF G+ RTV WN+++ G + D +L + MI + F P
Sbjct: 578 DMYCNCKQPKKGRLVFDGVVR--RTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCP 635
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ TT S+L +CV + +H + + GF D V N L+ MYS+ G ++ ++ +F
Sbjct: 636 NATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIF 695
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-AGE-----------------VPD 358
M R VSW MI+G G D+AL L M+ GE P+
Sbjct: 696 GRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPN 755
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT+++++ GC AL GK YA L +V V +AL+DMY+KCG + A +F
Sbjct: 756 SVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFD 815
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM------ELDLRPNRVTFLAVLQACTH 472
+P + V++W +I ++G+ EAL+LF M +RPN VT++A+ AC+H
Sbjct: 816 QMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSH 875
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI---KSDAG 529
+G +++G F+ M + V P +HY+C+ DLLGR G++KEA + + +MP K DA
Sbjct: 876 SGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDA- 934
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
W +LL AC+IH+++E GE A LF LEP+ A+ YV M+NIY+ G WD +R MK
Sbjct: 935 -WSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMK 993
Query: 590 RNQVKKFPGQSLVHINGKTCTFTVED 615
V+K PG S + + F D
Sbjct: 994 EMGVRKEPGCSWIEHGDEVHKFLSGD 1019
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 262/546 (47%), Gaps = 30/546 (5%)
Query: 20 NQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
+QW +R + A+ + M P+N FP + KA A + D + IH H
Sbjct: 296 SQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAH 355
Query: 80 IVK---SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
+ K +P S + V ++V+MY KC L A ++FD +PDRD SWN+MI +
Sbjct: 356 VFKFGHAPP-SSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEW 414
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNT 195
E L LF M + T++ + A H + + L K VH++ + G D N
Sbjct: 415 ELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNA 473
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YA+ + A+ +F G+ +G + +VSWN++I + D+F+++L + MI DG R
Sbjct: 474 LVTMYARLGRVNDAKALF-GVFDG-KDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARF 314
PD T+ S+L +C E L GR +H + + G ++ S + T L+ MY C R
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 591
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSG 373
+FDG+ RT W A+++GYA+ D+ALRLF M + E P+ T S++ C +
Sbjct: 592 VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCK 651
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+ Y G + V NAL+DMYS+ G + ++ +F + ++ +VSW TMI
Sbjct: 652 VFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMIT 711
Query: 434 GCALNGEFVEALDLFHQMME------------------LDLRPNRVTFLAVLQACTHAGF 475
GC + G + +AL+L H+M + +PN VT + VL C
Sbjct: 712 GCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAA 771
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L KG K ++ ++ S + D+ + G L A MPI+ + W L+
Sbjct: 772 LGKGKEIHAYAVK-QKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLI 829
Query: 536 CACKIH 541
A +H
Sbjct: 830 MAYGMH 835
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 131/262 (50%), Gaps = 4/262 (1%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R+ W ++ T+ F D+++ Y M+ PD ++L + L G+ +
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 281 HSHGIHYGF--DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
H+H +G V+V N+L++MY KCGD+ +AR +FD + DR VSW +MI+ +
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ-SGALELGKWFDNYACSGGLKDNVMVC 397
+ + +L LF M + P T++S+ C G + LGK Y G
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTN 471
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NAL+ MY++ G + DA+ LF K +VSW T+I+ + N F EAL + M+ +R
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531
Query: 458 PNRVTFLAVLQACTHAGFLEKG 479
P+ VT +VL AC+ L G
Sbjct: 532 PDGVTLASVLPACSQLERLRIG 553
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 291/550 (52%), Gaps = 39/550 (7%)
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D L A +F+ + + ++ WN M+ G A L ++ M +G + + L
Sbjct: 12 DGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLL 71
Query: 163 QAAIHAKHLSLLKSVHSFGIHIG---------------------------VDA----DVS 191
++ +K + +H+ + +G DA DV
Sbjct: 72 KSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVV 131
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
C I+ YA D + A VF I E R VVSWN++I G +++++L ++ M+
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITE--RDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHS----HGIHYGFDLDVSVINTLISMYSKCG 307
RPD T+VS++S+C ++ GR VHS +GF + ++N LI +YSKCG
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
D+++A LF+G+ + VSW +I GY EAL LF M +GE P+ VT+LS++
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309
Query: 368 GCGQSGALELGKWFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
C GA+++G+W Y G+ + + +LIDMY+KCG I A ++F ++ +++
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
SW MI G A++G A DLF +M + P+ +TF+ +L AC+H+G L+ G F
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKS 429
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
MT+ Y + P+L HY CM DLLG G KEA + + +MP++ D IW +LL ACK H N+E
Sbjct: 430 MTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLE 489
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+ E A +L ++EP ++ YV ++NIYA GRW+ VA +R ++ +KK PG S + ++
Sbjct: 490 LAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVD 549
Query: 606 GKTCTFTVED 615
F + D
Sbjct: 550 SVVHEFIIGD 559
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 233/473 (49%), Gaps = 41/473 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ +R ++ AL ++ RM PN+ +FPF+ K+CAK F + IH ++
Sbjct: 32 WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVL 91
Query: 82 KSPFWSDIFVQTTMVDMYAK---------------------CDRLDCAY----------K 110
K D +V T+++ MYA+ C L Y K
Sbjct: 92 KLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARK 151
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD++ +RDV SWNAMI G+ + G E+ L LF M ++ D T++ + A +
Sbjct: 152 VFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGS 211
Query: 171 LSLLKSVHSFGIHI----GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
+ L + VHS+ G + + + N I Y+KC D++ A +F G+ + VVSW
Sbjct: 212 IELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGL--SCKDVVSW 269
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--G 284
N++IGG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H +
Sbjct: 270 NTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDK 329
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G + S+ +LI MY+KCGDI++A +F+ M R+ SW AMI G+A G + A
Sbjct: 330 KLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAF 389
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDM 403
LF M PD +T + ++S C SG L+LG+ F + L + +ID+
Sbjct: 390 DLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDL 449
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
G +A E+ + +P E V W +++ C +G A ++++++
Sbjct: 450 LGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIE 502
>gi|357131661|ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Brachypodium distachyon]
Length = 924
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 316/595 (53%), Gaps = 9/595 (1%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+I++ + ++ WN I+ ++ +A +AL +FR M ++ +P+ T + +C
Sbjct: 334 RIFKKNHVS-WNVMIKGLMENEKAGEALAVFREML-SECQPDFATLVAVILSCGDQGLLC 391
Query: 72 YSQMIHGHIV-KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ IHG+I K F + + +++ +Y KCD A LF MP RD+ SWN M+ G+
Sbjct: 392 EGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLFRTMPIRDLISWNTMLSGY 451
Query: 131 AQMGFL-EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
++ L E+ +F + G+ T++ + + + L K+VHSF + G +
Sbjct: 452 SRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASG 511
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
VSV N + Y C D + G + ++SWN+ + GC +L ++ M
Sbjct: 512 VSVVNALMHMYICCGD-SLVAFTLLGSIMPVSDIISWNTAVVGCVQNGLHRGALEAFQFM 570
Query: 250 IYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
PD T+VS+LS+C + G+ +HS + ++ V N L++MY + D
Sbjct: 571 HSSLPLNPDSITLVSVLSACGTLKLQSLGKSIHSMALKRLLVFNLRVKNALLTMYFRFAD 630
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+SA +F + DR SW M+SG+AQ D AL+ + ME VP+ + +S+I
Sbjct: 631 TESAELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFYQKMEKF--VPNEMCTVSIICA 688
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C Q + GK + L++NV + +L+DMYSKCG + A +F + EK++ W
Sbjct: 689 CTQLRDVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSKCGRLDIAVRVFESSTEKSIACW 748
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+MI+ +G + +++LF M+ ++ R TF+A+L AC+HAG ++G Y+NLM++
Sbjct: 749 NSMISAFGFHGHGLRSIELFCSMIHSGMKATRSTFIALLSACSHAGLTDEGLKYYNLMSE 808
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCACKIHRNIEIG 547
+ + P H+ C+ D+LGR G+L+EA FV+S+P +A G+WG LL AC + +G
Sbjct: 809 KFGITPTPEHHVCIVDMLGRAGRLQEAHKFVESLPKSKEAHGVWGALLSACSNKSELRMG 868
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
E +A +L LEP ++ YV ++N+YA W G +R +++ ++ K G S+V
Sbjct: 869 EAIARQLLCLEPENSGYYVTISNLYAYQDMWGGAVQVRDILQDKRLMKPHGHSIV 923
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 163/568 (28%), Positives = 256/568 (45%), Gaps = 42/568 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I A+ LFRRM E ++ T + ++ + +H
Sbjct: 137 WNAVIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGASRAGELDLGMALHAAA 196
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK +D+ + +VDMYAKC + +F MP D ASWN++ G G E
Sbjct: 197 VKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEVSA 256
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGVD--ADVSVCNTWI 197
C F M + +QAD VT+ + A+ A+ L S +SVH + +G + A SV N+ I
Sbjct: 257 CYFREMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVANSLI 316
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y + + AE VF I + + VSWN +I G +K ++L +R M+ + +PD
Sbjct: 317 TFYFEFGFPEDAEKVFMRIFK--KNHVSWNVMIKGLMENEKAGEALAVFREMLSE-CQPD 373
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLF 316
T+V+++ SC L +G+ +H + F ++ S+ N+L+ +Y KC D +A LF
Sbjct: 374 FATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLF 433
Query: 317 DGMCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
M R +SW M+SGY++ L +EA +F + + G + T+L++I C L
Sbjct: 434 RTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDL 493
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA-LPEKTVVSWTTMIAG 434
GK ++ G V V NAL+ MY CG A L + +P ++SW T + G
Sbjct: 494 RFGKAVHSFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGSIMPVSDIISWNTAVVG 553
Query: 435 CALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFLEKGWG----------YF 483
C NG AL+ F M L L P+ +T ++VL AC G F
Sbjct: 554 CVQNGLHRGALEAFQFMHSSLPLNPDSITLVSVLSACGTLKLQSLGKSIHSMALKRLLVF 613
Query: 484 NLMTKVYQV----------NPELNHYS----------CMADLLGRKGKLKEALDFVQSM- 522
NL K + + EL YS CM + + AL F Q M
Sbjct: 614 NLRVKNALLTMYFRFADTESAELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFYQKME 673
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ +++CAC R++ G+ +
Sbjct: 674 KFVPNEMCTVSIICACTQLRDVRHGKSI 701
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 173/376 (46%), Gaps = 23/376 (6%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKC-----NDLKMAELVFRGIEEGLRTVVSWNS 228
++S+H + G D V + ++AYA+C +D + A ++F E+ V+ WN+
Sbjct: 82 VESLHCAALKSGAVLDPPVRTSLLAAYARCPSGGDHDARAALVLFHEAED--PDVILWNA 139
Query: 229 IIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+IG T + D++ +R M G D TTVV +LS L G +H+ +
Sbjct: 140 VIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGASRAGELDLGMALHAAAVKR 199
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
D D+++ N L+ MY+KCG + +F M SW ++ G G + + F
Sbjct: 200 RLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEVSACYF 259
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQS-GALELGKWFDNYACSGGLKDNV--MVCNALIDMY 404
M D VT+ S+IS ++ G G+ G +D V N+LI Y
Sbjct: 260 REMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVANSLITFY 319
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+ G DA ++F + +K VSW MI G N + EAL +F +M+ + +P+ T +
Sbjct: 320 FEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVFREMLS-ECQPDFATLV 378
Query: 465 AVLQACTHAGFLEKGWGYFNLMTK--VYQVNPELNHYSCMADLLGRKGKLKEALD---FV 519
AV+ +C G L +G +T+ ++ V L + LLG K +A
Sbjct: 379 AVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGN-----SLLGLYMKCDDAYTANLLF 433
Query: 520 QSMPIKSDAGIWGTLL 535
++MPI+ D W T+L
Sbjct: 434 RTMPIR-DLISWNTML 448
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 10/235 (4%)
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL--VHSHGIHYGFDLDVSVINTLISMYS 304
RH++ DG P T S++ + +A + G + +H + G LD V +L++ Y+
Sbjct: 52 RHLL-DG-TPRGTRASSIVRALREYDAPLAGSVESLHCAALKSGAVLDPPVRTSLLAAYA 109
Query: 305 KC---GDIDS--ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA-GEVPD 358
+C GD D+ A LF D + W A+I + L +A+ LF M GE D
Sbjct: 110 RCPSGGDHDARAALVLFHEAEDPDVILWNAVIGALTRACRLGDAVALFRRMAGVRGEAFD 169
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
TV+ M+SG ++G L+LG A L ++ + NAL+DMY+KCGS D+ +F+
Sbjct: 170 STTVVVMLSGASRAGELDLGMALHAAAVKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFW 229
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
++P SW ++ G NG + F +M+ L ++ + VT +V+ A + A
Sbjct: 230 SMPCWDTASWNSVTGGSTFNGLSEVSACYFREMIRLAVQADEVTLSSVISASSRA 284
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 299/583 (51%), Gaps = 5/583 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
NS I D+ ++ L L +++++ P + +CAK +H I+K
Sbjct: 48 NSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIK 107
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
F S++++ + +VDMY KC + A +LFD+MP R+V +WN++I G+ +G E + L
Sbjct: 108 VGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIEL 167
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F M VGI +V + + L VH + G ++ V I Y+K
Sbjct: 168 FLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSK 227
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
++ + L+F + E R +++W S++ G + + ++ R M G R + T
Sbjct: 228 GWNIDASRLMFDLMPE--RNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYN 285
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF--LFDGMC 320
LLSS L + VH I G + + + TL+++YS+C F + G+
Sbjct: 286 CLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVT 345
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++SW A+I G + G+ + AL+ F M AG DL T S++ G L+ GK
Sbjct: 346 RWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQ 405
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G N+ V N L+ MY++CGSI DA+ +F + V+SW ++++GCA +G
Sbjct: 406 IHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGY 465
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV-NPELNHY 499
EA++LF QM ++P+ TFL VL AC H G L+KG YF+LM Y + +P HY
Sbjct: 466 GREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHY 525
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
S M DL R G L EA DF+ +MPI+ ++ LL AC++H N+EI A +L ++ P
Sbjct: 526 SSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCP 585
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ YV ++N+ A G WD VA++R +M V+K PG S +
Sbjct: 586 NDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 129/253 (50%)
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
S NS I T + L + G P + ++SSC ++ G +HS
Sbjct: 46 SCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTI 105
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
I GFD +V + + L+ MY KCG + SA+ LFD M R V+W ++ISGY G + A+
Sbjct: 106 IKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAI 165
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
LF M G P +V +++ GC + +LG + G N++V LID+Y
Sbjct: 166 ELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLY 225
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SK +I +R +F +PE+ +++WT+M+AG A + V A+ L M L +R N VT+
Sbjct: 226 SKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYN 285
Query: 465 AVLQACTHAGFLE 477
+L + + + L+
Sbjct: 286 CLLSSFSSSNDLD 298
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 160/333 (48%), Gaps = 9/333 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W S + + A++L R M++ I N +T+ + + + +D + + +H
Sbjct: 246 IITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHC 305
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
I++ S+ +++ T+V +Y++C L+ K+ + D SWNA+I G + +G
Sbjct: 306 RIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNG 365
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E L F MR GI D T + +A L K +H+ + G ++++V N
Sbjct: 366 EAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGL 425
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+S YA+C + A+ VF ++ V+SWNS++ GC Y +++ + M G +P
Sbjct: 426 VSMYARCGSINDAKRVFSLMDR--HDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKP 483
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI---NTLISMYSKCGDIDSAR 313
D TT + +LS+C L +G L + + + L+ ++++ ++S+ G + A
Sbjct: 484 DNTTFLVVLSACRHVGLLDKG-LEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAE 542
Query: 314 FLFDGMCDRTRVS-WTAMISGYAQKGDLDEALR 345
+ M S + A++S G+++ A+R
Sbjct: 543 DFINTMPIEPGPSVYKALLSACQVHGNVEIAVR 575
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/587 (33%), Positives = 312/587 (53%), Gaps = 55/587 (9%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD-----RLDCAYKLFDKMP 116
K+C ++ + IH I + DI ++ + A C L+ A K+F +
Sbjct: 45 KSCKSMTHL---KQIHAQIFRVGLHQDI---VSLNKLMAFCTDPFNGNLNYAEKMFKYIR 98
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+ +N +I FA+ G ++ L LF +R G+ D T + +A + +S +
Sbjct: 99 YPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEK 158
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+ G++ D V N+ I YA+ + +++F + + R V+SWN +I G
Sbjct: 159 LRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPD--RDVISWNVMISGYVKC 216
Query: 237 DKFDDSLN-FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD----- 290
+F+D++N F R G PD TVVS LS+C + L G+ +H HY D
Sbjct: 217 RRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIH----HYVRDNVKFT 272
Query: 291 -------LDV--------------------SVI--NTLISMYSKCGDIDSARFLFDGMCD 321
LD+ +VI T++S Y+ CG+++ AR LF+G
Sbjct: 273 PIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPI 332
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V WTAMI+GY Q DEA+ LF M+ PD V+S+++GC Q+GA+E GKW
Sbjct: 333 RDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWI 392
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ + + +V ALI+MY+KCG I A E+FY L K SWT++I G A+NG+
Sbjct: 393 HEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKT 452
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
+AL+LF +M + +RP+ +TF+ VL AC+H G +E+G +FN M YQ+ P++ HY C
Sbjct: 453 SKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGC 512
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDA---GIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+ DLLGR G L EA + ++ +P ++ A ++G+LL AC+I+ N+E+GE VA +L + E
Sbjct: 513 LVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFE 572
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
++ + +ANIYA RW+ V +R MK VKK PG S + ++
Sbjct: 573 SSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVD 619
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 241/498 (48%), Gaps = 39/498 (7%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
++ K R + +N I+ K + L+LF +++++ + P+N T+PF+ KA L
Sbjct: 92 KMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLG 151
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ ++ + G + K+ D +V+ +++DMYA+ D LFD+MPDRDV SWN MI
Sbjct: 152 EVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMIS 211
Query: 129 GFAQMGFLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF------- 180
G+ + E + +F M+ G+ D TV+ A K L L K +H +
Sbjct: 212 GYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKF 271
Query: 181 ----------------------GIHIGVDADVSVC-NTWISAYAKCNDLKMAELVFRGIE 217
+ + + +C T +S YA C +L+ A +F G
Sbjct: 272 TPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEG-- 329
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+R VV W ++I G ++FD+++ +R M +PD VVSLL+ C A+ QG
Sbjct: 330 SPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQG 389
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+ +H +D V LI MY+KCG I+ A +F G+ + SWT++I G A
Sbjct: 390 KWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMN 449
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMV 396
G +AL LF M+ AG PD +T + ++S C G +E G K+F++ +K V
Sbjct: 450 GKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEH 509
Query: 397 CNALIDMYSKCGSIGDARELFYALPEK----TVVSWTTMIAGCALNGEFVEALDLFHQMM 452
L+D+ + G + +A EL +P++ TV + ++++ C + G + Q++
Sbjct: 510 YGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLV 569
Query: 453 ELDLRPNRV-TFLAVLQA 469
+ + + V T LA + A
Sbjct: 570 KFESSDSSVHTLLANIYA 587
>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 748
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/576 (32%), Positives = 308/576 (53%), Gaps = 6/576 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A L + M+ I+P+ +TF + + +S+ Q +H + F DI V +M+
Sbjct: 130 EACSLVKEMRFQGIKPSPVTF---LEMLSGISEITQLQCLHAFALVYGFECDIAVMNSML 186
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
++Y KCDR+ A +LFD+M RD+ SWN MI GFA + + ++L L Y MR G++ D
Sbjct: 187 NLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQ 246
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + L + + +H + G D D+ + I+ Y KC + + + V I
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETI 306
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ + VV W +I G + + +L + M++ G + S+++SC +
Sbjct: 307 PD--KDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G VH + + G+ LD +N+ I+MY+KCG +D + LF+ M +R VSW A+ISG+AQ
Sbjct: 365 GASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQ 424
Query: 337 KGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
GDL +AL LF M+ + D +TV+S++ C +GAL +G+ ++ +
Sbjct: 425 HGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTL 484
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V AL+DMYSKCG + A+ F ++ K VVSW T+IAG +G+ AL+++ + +
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFG 544
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++PN V FLAVL +C+H G +++G F+ M + + V P H +C+ DLL R ++++A
Sbjct: 545 MKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRVEDA 604
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
F + + + G +L A + E+ + + + EL+P A YV + + +A
Sbjct: 605 FKFYKENFTRPSIDVLGIILDASHANGKTEVEDIICRDMIELKPVDAGHYVRLGHSFAAM 664
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
RWD V+ M+ +KK PG S + INGKT TF
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKIEINGKTTTF 700
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 166/554 (29%), Positives = 282/554 (50%), Gaps = 13/554 (2%)
Query: 13 IYRSSTINQ---WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
I RSS +N +NS I + + L F M N + P+ TFP + KAC L
Sbjct: 2 IRRSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQL 61
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ IH ++ + F SD ++ +++V++YAK L A K+FD+M DRDV W AMI
Sbjct: 62 LSFGLSIHQKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGC 121
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+++ G + L MR GI+ VT + + ++ L+ +H+F + G + D
Sbjct: 122 YSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLSG---ISEITQLQCLHAFALVYGFECD 178
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
++V N+ ++ Y KC+ + A+ +F +E+ R +VSWN++I G + + L M
Sbjct: 179 IAVMNSMLNLYCKCDRVGDAKELFDQMEQ--RDMVSWNTMISGFAFVANMSEILKLLYRM 236
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
DG RPD T + LS L GR++H + GFD D+ + LI+MY KCG+
Sbjct: 237 RDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEE 296
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+++ + + + D+ V WT MISG + G ++AL +F M +G + S+++ C
Sbjct: 297 EASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASC 356
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q G+ +LG Y G + N+ I MY+KCG + + LF + E+ +VSW
Sbjct: 357 AQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWN 416
Query: 430 TMIAGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+I+G A +G+ +AL LF +M + + + +T +++LQAC+ AG L G ++ +
Sbjct: 417 AIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIR 476
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH--RNIEI 546
+ + P + + D+ + G L+ A S+ K D WGTL+ H +I +
Sbjct: 477 SF-IRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWK-DVVSWGTLIAGYGFHGKGDIAL 534
Query: 547 GEYVAYRLFELEPH 560
Y + F ++P+
Sbjct: 535 EIYSEFLHFGMKPN 548
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 192/399 (48%), Gaps = 6/399 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + L L RM+ + + P+ TF + D +M+H IV
Sbjct: 213 WNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIV 272
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+ ++T ++ MY KC + +Y++ + +PD+DV W MI G ++G EK L
Sbjct: 273 GTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALI 332
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G + + + L SVH + + G D N++I+ YA
Sbjct: 333 VFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYA 392
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP-DVTT 260
KC L + ++F + E R +VSWN+II G +L + M + + D T
Sbjct: 393 KCGHLDKSLILFERMNE--RDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLT 450
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARFLFDGM 319
VVSLL +C AL GR++H I F ++++T L+ MYSKCG +++A+ F+ +
Sbjct: 451 VVSLLQACSSAGALPVGRMIHCIVIR-SFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSI 509
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
+ VSW +I+GY G D AL ++ G P+ V L+++S C +G ++ G
Sbjct: 510 TWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGL 569
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
K F + G++ N ++D+ + + DA + +
Sbjct: 570 KIFSSMVRDFGVEPNHEHLACVVDLLCRAKRVEDAFKFY 608
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 312/598 (52%), Gaps = 5/598 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + + LF MK+ + +F + K A F + +HG +V
Sbjct: 15 WNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKRFDLGEQVHGLVV 74
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + +++V +++VDMYAKC+R++ A+ F ++ + + SWNA+I GF Q+ +
Sbjct: 75 KGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDTKTAFW 134
Query: 142 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M + + D T L +LLK VH+ + +G++ ++++CN IS+Y
Sbjct: 135 LLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEHEITICNAMISSY 194
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A C + A+ VF G+ G + ++SWNS+I G + ++ + + + M + D+ T
Sbjct: 195 ANCGLVSDAKRVFDGLG-GSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYT 253
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK--CGDIDSARFLFDG 318
++S+C E G+ +H I G + SV N LISMY + G + A LF+
Sbjct: 254 YTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFES 313
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + VSW ++++G++Q G ++A++ F + ++ D +++ C L+LG
Sbjct: 314 LKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLG 373
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCAL 437
+ A + N V ++LI MYSKCG I +AR+ F + K ++W MI G A
Sbjct: 374 QQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQ 433
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G +LDLF QM +++ + VTF A+L AC+H G +++G N M VY++ P +
Sbjct: 434 HGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRME 493
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+ DLLGR G + + + ++SMP+ D + T L C+ IE+ VA L E+
Sbjct: 494 HYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEI 553
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP YV ++++Y+ +W+ AN++ MMK VKK PG S + I + F ED
Sbjct: 554 EPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIEIRNQVNAFNAED 611
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 180/385 (46%), Gaps = 10/385 (2%)
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
+LFD+MP RD SWN MI G+ G LE CLF +M+ G D + L + AK
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L + VH + G + +V V ++ + YAKC ++ A F I E VSWN++
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILE--PNSVSWNAL 119
Query: 230 IGGCTYGDKFDDSLNFYRHMIYD---GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
I G + D F+ + + D T LL+ P + VH+ +
Sbjct: 120 IAG--FVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLK 177
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGYAQKGDLDEALR 345
G + ++++ N +IS Y+ CG + A+ +FDG+ + +SW +MI+G ++ + A
Sbjct: 178 LGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFE 237
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LF M D+ T ++S C GK GL+ V NALI MY
Sbjct: 238 LFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYI 297
Query: 406 K--CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
+ G + DA LF +L K +VSW +++ G + NG +A+ F + ++ + F
Sbjct: 298 QFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAF 357
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTK 488
AVL++C+ L+ G L TK
Sbjct: 358 SAVLRSCSDLATLQLGQQTHALATK 382
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 4/307 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + WNS I + A LF M +N IE + T+ I AC+ + +
Sbjct: 213 SKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKS 272
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAK--CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+HG ++K V ++ MY + + A LF+ + +D+ SWN+++ GF+Q
Sbjct: 273 LHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQN 332
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G E + F +R I+ D + ++ L L + H+ +++ V
Sbjct: 333 GLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVT 392
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ I Y+KC ++ A F I T ++WN++I G SL+ + M
Sbjct: 393 SSLILMYSKCGVIENARKCFEQISSKHNT-IAWNAMILGYAQHGSGQVSLDLFSQMCNQN 451
Query: 254 FRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+ D T ++L++C + +G L++S Y + + + + G ++
Sbjct: 452 VKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKV 511
Query: 313 RFLFDGM 319
+ L + M
Sbjct: 512 KELIESM 518
>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
Length = 810
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 200/591 (33%), Positives = 319/591 (53%), Gaps = 27/591 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V +E A+LL R M +N + N T I ACA++S + IHG +
Sbjct: 238 SWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMV 297
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK---MPDRDVASWNAMIVGFAQMGFLE 137
+K+ + D V+ ++ Y ++ + K+F++ + +R + W+A I G + L
Sbjct: 298 LKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLR 355
Query: 138 KVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
V L M G++ + + +V + L HS I G + V +
Sbjct: 356 SVQ-LLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQL------HSSAIKEGFIHGILVGS 408
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDG 253
+ Y++C++++ + VF ++E R VSW +++ G T+G + L F R+MI DG
Sbjct: 409 ALSTMYSRCDNVQDSYKVFEEMQE--RDGVSWTAMVAGFATHGHSVEAFLTF-RNMILDG 465
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINT-LISMYSKCGDIDS 311
F+PD ++ ++LS+C PE L++G+ VH H + YG + + IN ISMYSKC + +
Sbjct: 466 FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYG---ETTFINDCFISMYSKCQGVQT 522
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR +FD + +V W++MISGYA G +EA+ LF M AA D S++S C
Sbjct: 523 ARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 582
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
K YA G+ + V ++L+ +YS+ G++ D+R++F + +V+WTT+
Sbjct: 583 IARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTI 642
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G A +G AL +F M++L +RP+ V ++VL AC+ G +E+G+ YFN M Y
Sbjct: 643 IDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYG 702
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V PEL HY CM DLLGR G+L EA FV SMP+K D +W TLL AC++H + +G +V
Sbjct: 703 VEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLGRFVE 762
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
++ E + + + ++NI A G W+ VA +R MK V K PG S+V
Sbjct: 763 NKIREGN-YDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 248/561 (44%), Gaps = 43/561 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + AV E A+ +FR M EPN+ T+ ACA + + +HG ++
Sbjct: 138 WNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVL 197
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D+FV T++V+MYAKC + A + F +MP R+V SW I GF Q +
Sbjct: 198 RRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAML 257
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G+ + T + A + +H + + D V IS Y
Sbjct: 258 LLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYT 317
Query: 202 KCNDLKMAELVFRGIEEGLRTVVS-WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++++E VF E G + S W++ I G + S+ R M + G RP+
Sbjct: 318 NFGFIELSEKVFE--EAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKC 374
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+ SS ++ G +HS I GF + V + L +MYS+C ++ + +F+ M
Sbjct: 375 YASVFSSV---NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQ 431
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R VSWTAM++G+A G EA F M G PD V++ +++S C + L GK
Sbjct: 432 ERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKE 491
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + + + I MYSKC + AR +F A P K V W++MI+G A NG
Sbjct: 492 VHGHTLR-VYGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGC 550
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACT----------------HAGFLEKGWGYFN 484
EA+ LF M+ +R + ++L C AG L +
Sbjct: 551 GEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSD-QSVSS 609
Query: 485 LMTKVYQVN---------------PELNHYSCMADLLGRKGKLKEAL---DFVQSMPIKS 526
+ KVY + P+L ++ + D + G + AL D + + ++
Sbjct: 610 SLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRP 669
Query: 527 DAGIWGTLLCACKIHRNIEIG 547
D + ++L AC + +E G
Sbjct: 670 DTVVLVSVLSACSRNGLVEQG 690
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 201/449 (44%), Gaps = 10/449 (2%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
+ +V T MVD+ AK RL A ++F WNA + G + G + +F +M
Sbjct: 103 NAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV 162
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+ + T G A + LS+ ++VH + + DV V + ++ YAKC D+
Sbjct: 163 WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMG 222
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F + +R VVSW + I G D+ ++ R M+ +G + T S+L +
Sbjct: 223 AAMREFWRMP--VRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLA 280
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVS 326
C + + +H + LD V LIS Y+ G I+ + +F+ R
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI 340
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W+A ISG + L +++L M G P+ S+ S ++E G + A
Sbjct: 341 WSAFISGVSNH-SLLRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIEFGGQLHSSAI 396
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
G ++V +AL MYS+C ++ D+ ++F + E+ VSWT M+AG A +G VEA
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
F M+ +P+ V+ A+L AC L KG +VY +N C +
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFIN--DCFISMY 514
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ ++ A + P K D +W +++
Sbjct: 515 SKCQGVQTARRIFDATPRK-DQVMWSSMI 542
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 10/295 (3%)
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G+ + VC + AK L+ A VF + + V WN+ + G + ++
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPS--SAVCWNAAVSGAVRNGEGGLAVE 156
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+R M++ P+ T LS+C E L GR VH + + DV V +L++MY+
Sbjct: 157 MFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYA 216
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCGD+ +A F M R VSWT I+G+ Q + A+ L M G + T S
Sbjct: 217 KCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATS 276
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++ C Q + + + +V ALI Y+ G I + ++F E
Sbjct: 277 ILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAG 333
Query: 425 VVS----WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
VS W+ I+G + N + ++ L +M LRPN + +V + F
Sbjct: 334 TVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEF 387
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%)
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G + V ++ + +K G + A +F + V W A +SG + G+ A+ +F
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M P+ T +S C L +G+ + +V V +L++MY+KC
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC 218
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G +G A F+ +P + VVSWTT IAG + E V A+ L +M+ + N+ T ++L
Sbjct: 219 GDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSIL 278
Query: 468 QACTHAGFLEK 478
AC + +
Sbjct: 279 LACAQMSMVRE 289
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL N VC ++D+ +K G + DA +F + V W ++G NGE A+++F
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLL 506
M+ PN T+ L AC L G L V + +PE + + + + ++
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGL---VLRRDPEYDVFVGTSLVNMY 215
Query: 507 GRKGKLKEALDFVQSMPIKS 526
+ G + A+ MP+++
Sbjct: 216 AKCGDMGAAMREFWRMPVRN 235
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 291/567 (51%), Gaps = 3/567 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+ L L MK+ I+ N ++ A + D + +H + ++ SDI V T +V
Sbjct: 311 EVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIV 370
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MYAKC L A + F + RD+ W+A + Q G+ + L +F M+ G++ D
Sbjct: 371 SMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKT 430
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+ L A L K +H + I + +D+SV T +S Y +C A +F +
Sbjct: 431 ILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRM 490
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ VV+WN++I G T +L + + G +PD T+VSLLS+C + L
Sbjct: 491 H--YKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYL 548
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD-GMCDRTRVSWTAMISGYA 335
G H + I G + ++ V LI MY+KCG + +A LF + VSW MI+GY
Sbjct: 549 GICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYL 608
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
G +EA+ F M+ P+LVT ++++ L F G + +
Sbjct: 609 HNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTL 668
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ N+LIDMY+K G + + + F+ + K +SW M++G A++G+ AL LF M E
Sbjct: 669 IGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETH 728
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ + V++++VL AC HAG +++G F MT+ + + P + HY+CM DLLG G E
Sbjct: 729 VPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEV 788
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
L + MP + DA +WG LL ACK+H N+++GE + L +LEP +A Y+ +++IYA
Sbjct: 789 LCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQC 848
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLV 602
GRW R+ M + +KK PG S V
Sbjct: 849 GRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/560 (29%), Positives = 287/560 (51%), Gaps = 12/560 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ WN+ I + +AL +F+RM+ + +EP++++ +A A ++L D + IH
Sbjct: 193 VASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIH 252
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G++V+ + V +++DMY+KC + A+++FD+M +D SW M+ G+ G
Sbjct: 253 GYVVRRCVFG--VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYF 310
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+VL L M+ I+ + ++V+ AA + L K VH++ + +G+ +D+ V +
Sbjct: 311 EVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIV 370
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S YAKC +LK A+ F +E R +V W++ + ++L+ ++ M ++G +PD
Sbjct: 371 SMYAKCGELKKAKEFFLSLEG--RDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPD 428
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T + SL+S+C + G+++H + I D+SV TL+SMY++C A LF+
Sbjct: 429 KTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFN 488
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M + V+W +I+G+ + GD AL +F ++ +G PD T++S++S C L L
Sbjct: 489 RMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYL 548
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVSWTTMIAGCA 436
G F G++ + V ALIDMY+KCGS+ A LF+ K VSW MIAG
Sbjct: 549 GICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYL 608
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
NG EA+ F+QM +RPN VTF+ +L A ++ L + + + ++ ++ L
Sbjct: 609 HNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTL 668
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
S + D+ + G+L + M K W +L +H E VA LF
Sbjct: 669 IGNS-LIDMYAKSGQLSYSEKCFHEMENKGTIS-WNAMLSGYAMHGQGE----VALALFS 722
Query: 557 LEPHSAAPYVEMANIYALGG 576
L + P ++ I L
Sbjct: 723 LMQETHVPVDSVSYISVLSA 742
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 238/467 (50%), Gaps = 8/467 (1%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+L P N I S I WNS IR + +A+ ++ M +EP+ TF F+ KAC
Sbjct: 81 TLAP--NSITNPSLI-LWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKAC 137
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
DF IH I D+F+ T +VDMY K LD A K+FDKMP +DVASWN
Sbjct: 138 TGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWN 197
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
AMI G +Q + L +F M++ G++ D V+++ L A + + KS+H + +
Sbjct: 198 AMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVR 257
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
V VS N+ I Y+KC ++K+A +F + ++ +SW +++ G + + + L
Sbjct: 258 RCVFGVVS--NSLIDMYSKCGEVKLAHQIFD--QMWVKDDISWATMMAGYVHHGCYFEVL 313
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
M + + +VV+ + + L +G+ VH++ + G D+ V ++SMY
Sbjct: 314 QLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMY 373
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
+KCG++ A+ F + R V W+A +S Q G EAL +F M+ G PD +
Sbjct: 374 AKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILS 433
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
S++S C + + LGK Y + ++ V L+ MY++C S A LF + K
Sbjct: 434 SLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYK 493
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
VV+W T+I G G+ AL++F ++ ++P+ T +++L AC
Sbjct: 494 DVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSAC 540
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 11/320 (3%)
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+++ WNS+I + F +++ Y+ M Y G PD T +L +C +G +H
Sbjct: 91 SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ DV + L+ MY K G +D+AR +FD M + SW AMISG +Q +
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPC 210
Query: 342 EALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA---CSGGLKDNVMVC 397
EAL +F M+ G PD V++L++ + ++ K Y C G+ V
Sbjct: 211 EALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGV-----VS 265
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
N+LIDMYSKCG + A ++F + K +SW TM+AG +G + E L L +M ++
Sbjct: 266 NSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIK 325
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
N+++ + + A T LEKG N ++ + ++ + + + + G+LK+A +
Sbjct: 326 MNKISVVNSVLAATETRDLEKGKEVHNYALQL-GMTSDIVVATPIVSMYAKCGELKKAKE 384
Query: 518 FVQSMPIKSDAGIWGTLLCA 537
F S+ + D +W L A
Sbjct: 385 FFLSLEGR-DLVVWSAFLSA 403
>gi|125562361|gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
Length = 642
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 250/434 (57%), Gaps = 1/434 (0%)
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
AA L + H+ + + + +D V N I+ Y+ CN A LV V
Sbjct: 14 AAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDV 73
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWN+II G G + +L + M + R D T++++L +C A+ G L H+
Sbjct: 74 VSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHAL 133
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ GF+++ + ++L+SMY+KCG ++ AR +F+ M +R V WT+MI+G Q G EA
Sbjct: 134 VVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEA 193
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+ LF M+ AG D T+ +++S CGQ GAL+LG++ Y GL + V N+LIDM
Sbjct: 194 VDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDM 253
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRVT 462
YSKCG + A ++F L ++ V +WT MI G A+NG VEALDLF QM D + PN V
Sbjct: 254 YSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVI 313
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
FL VL AC+H G +E+G+ +F+ M+KVY + P + HY CM DLLGR L EA F++ M
Sbjct: 314 FLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDM 373
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
P+ D +W +LL AC+ + + EY A R+ +LEP +V ++N+YA RW V
Sbjct: 374 PVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTSRWVDVN 433
Query: 583 NLRTMMKRNQVKKF 596
N+RT M ++ +
Sbjct: 434 NVRTGMGNSRTSQI 447
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 133/254 (52%), Gaps = 3/254 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+S + WN+ I + +KAL F +M K + + +T + ACA+ +
Sbjct: 70 ASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 129
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
H +V + F + ++ +++V MYAKC ++ A ++F++MP+R+V W +MI G Q G
Sbjct: 130 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGR 189
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + LF +M++ G++AD T+ + + L L + +H++ G+ ++SV N+
Sbjct: 190 FKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNS 249
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGF 254
I Y+KC D+ A +FRG+ + R V +W +I G ++L+ + M D
Sbjct: 250 LIDMYSKCGDVNKAYQIFRGLTK--RDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKV 307
Query: 255 RPDVTTVVSLLSSC 268
P+ + +L++C
Sbjct: 308 MPNEVIFLGVLTAC 321
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--K 423
IS + +L++G F + L + V NALI+MYS C AR + + P
Sbjct: 12 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWAS 71
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---- 479
VVSW T+IAG G +AL FHQM + +R + VT L VL AC G ++ G
Sbjct: 72 DVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCH 131
Query: 480 ------------------------WGYFNLMTKVYQVNPELNHYSCMADLLG--RKGKLK 513
G +V+ PE N + + G + G+ K
Sbjct: 132 ALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFK 191
Query: 514 EALDFVQSMPI---KSDAGIWGTLLCACKIHRNIEIGEYV 550
EA+D + M I K+D T++ +C +++G Y+
Sbjct: 192 EAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYL 231
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 200/606 (33%), Positives = 310/606 (51%), Gaps = 51/606 (8%)
Query: 38 ALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
AL +F M +N + N + ++ A L+ L+ +M H D+F M+
Sbjct: 52 ALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPH---------KDLFSWNLML 102
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
YA+ RL A LFD MP++DV SWNAM+ G+ + G +++ +F M + +
Sbjct: 103 TGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM----PHKNSI 158
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+ GL A + + L + + D ++ CN + Y K N L A +F I
Sbjct: 159 SWNGLLAAYVRSGRLEEARRL----FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQI 214
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+R ++SWN++I G D L+ R + + DV T +++ + V L +
Sbjct: 215 P--VRDLISWNTMISGYAQ----DGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDE 268
Query: 277 GR----------------LVHSHGIHYGFDL-----------DVSVINTLISMYSKCGDI 309
R ++ + + D+ ++ N +IS Y + GD+
Sbjct: 269 ARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDL 328
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
AR LFD M R VSW A+I+GYAQ G +EA+ + M+ GE + T +S C
Sbjct: 329 AQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSAC 388
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
ALELGK G + +V NAL+ MY KCG I +A ++F + K +VSW
Sbjct: 389 ADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWN 448
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
TM+AG A +G +AL +F M+ ++P+ +T + VL AC+H G ++G YF+ M K
Sbjct: 449 TMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKD 508
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Y + P HY+CM DLLGR G L+EA + +++MP + DA WG LL A +IH N+E+GE
Sbjct: 509 YGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQ 568
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A +F++EPH++ YV ++N+YA GRW V+ +R M++ V+K PG S V + K
Sbjct: 569 AAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIH 628
Query: 610 TFTVED 615
TFTV D
Sbjct: 629 TFTVGD 634
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ + MK++ N TF ACA ++ + +HG +V++ + V +V
Sbjct: 361 EAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALV 420
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY KC +D AY +F + +D+ SWN M+ G+A+ GF + L +F +M G++ D +
Sbjct: 421 GMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEI 480
Query: 157 TVMGLTQAAIHA 168
T++G+ A H
Sbjct: 481 TMVGVLSACSHT 492
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 71/348 (20%)
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA------ 353
IS + + G D A +FD M R VS+ AMISGY + A LF M
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99
Query: 354 -------------------GEVP--DLVTVLSMISGCGQSGALELGK-WFDN-------- 383
+P D+V+ +M+SG +SG ++ + FD
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS 159
Query: 384 -------YACSGGLKD-----------NVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
Y SG L++ ++ CN L+ Y K +GDAR+LF +P + +
Sbjct: 160 WNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDL 219
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
+SW TMI+G A +G+ +A LF + D+ T+ A++ A G L++ F+
Sbjct: 220 ISWNTMISGYAQDGDLSQARRLFEESPVRDV----FTWTAMVYAYVQDGMLDEARRVFDE 275
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA-CKIHRNI 544
M + +++ Y+ M + ++ + + MP + G W ++ C+ N
Sbjct: 276 MPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQ---NG 326
Query: 545 EIGEYVAYRLFELEPH-SAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
++ + A LF++ P + + + YA G ++ N+ MKR+
Sbjct: 327 DLAQ--ARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRD 372
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 66/162 (40%), Gaps = 18/162 (11%)
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
C I + + G A +F A+P + VS+ MI+G N +F A DLF +M DL
Sbjct: 36 CTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL 95
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG--RKGKLKE 514
++ +L L F+ M PE + S A L G R G + E
Sbjct: 96 ----FSWNLMLTGYARNRRLRDARMLFDSM-------PEKDVVSWNAMLSGYVRSGHVDE 144
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
A D MP K+ W LL A +E A RLFE
Sbjct: 145 ARDVFDRMPHKNSIS-WNGLLAAYVRSGRLE----EARRLFE 181
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 267/496 (53%), Gaps = 6/496 (1%)
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
WN + A + + L+ +M G D + + ++ LSL S
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSC---ASLSLPVSGQQLHC 77
Query: 183 HI---GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
H+ G + + V IS Y KC + A VF + + V +N++I G T K
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D+ +R M G D T++ L+ C PE L GR +H + G D +V+V+N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
I+MY KCG +++ R LFD M + ++W A+ISGY+Q G + L L+ M+++G PD
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T++S++S C GA ++G S G NV V NA I MY++CG++ AR +F
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+P K++VSWT MI ++G L LF M++ +RP+ F+ VL AC+H+G +KG
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
F M + Y++ P HYSC+ DLLGR G+L EA++F++SMP++ D +WG LL ACK
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
IH+N+++ E ++ E EP++ YV M+NIY+ +G+ +R MM+ +K PG
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 600 SLVHINGKTCTFTVED 615
S V G+ F D
Sbjct: 498 SYVEHKGRVHLFLAGD 513
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 232/474 (48%), Gaps = 27/474 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN ++RE ++ +++ L+R M ++ P+ +FPFI K+CA LS + Q +H H+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS--WNAMIVGFAQMGFLEKV 139
K ++ FV T ++ MY KC + A K+F++ P S +NA+I G+ +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+F M+ G+ D VT++GL ++L L +S+H + G+D++V+V N++I+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC ++ +F E ++ +++WN++I G + D L Y M G PD
Sbjct: 201 YMKCGSVEAGRRLFD--EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+VS+LSSC A G V GF +V V N ISMY++CG++ AR +FD M
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
++ VSWTAMI Y G + L LF M G PD + ++S C SG + G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
+ F L+ + L+D+ + G + +A E ++P E W ++ C +
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ A F +++E + PN + GY+ LM+ +Y
Sbjct: 439 HKNVDMAELAFAKVIEFE--PNNI-------------------GYYVLMSNIYS 471
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 288/529 (54%), Gaps = 4/529 (0%)
Query: 85 FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFY 144
F D+ + ++ MY KC RL A +FD+M R+V SW A++ G Q G + L LF
Sbjct: 3 FGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFS 62
Query: 145 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
M L G++ + T +A L + + +H + G D V N+ I Y+KC
Sbjct: 63 KMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCG 122
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSL 264
+ A +F + +R ++SWN++I G T + +L ++ M G D T S
Sbjct: 123 RINEAACMFEVMP--VRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGF--DLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
L +C A+ +G +H+ I GF ++ +V LI +Y KCG + AR +F + ++
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
+SWTA+I GYAQ+G+L E++ LF + + D + SM+ ++ GK
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+A ++ VCN+++DMY KCG I +A LF +P + V+SWT MI G +G
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
EA+ LF +M P+ VT+LAVL C+H+G +EKG YF+ + + + + HY+CM
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
DLLGR G+LKEA + V SMP++++ GIW TLL AC++H ++E+G+ V L L+ +
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENP 480
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
YV M+NIYA G W +R ++K ++KK G+S V I+ + F
Sbjct: 481 VNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFF 529
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 233/462 (50%), Gaps = 7/462 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ W + + + ++LLLF +M + ++PN+ TF KAC L+ + IH
Sbjct: 37 NVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIH 96
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
VK+ F V +++DMY+KC R++ A +F+ MP R++ SWNAMI G+ GF E
Sbjct: 97 DICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCE 156
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV--DADVSVCNT 195
K L LF M+ VG D T +A + +H+F I G + +V
Sbjct: 157 KALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGA 216
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I Y KC L MA VF IEE + V+SW ++I G +S+ +R + +
Sbjct: 217 LIDLYVKCGKLFMARRVFSHIEE--KHVISWTALILGYAQEGNLAESMELFRQLRESSIQ 274
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D + S++ + QG+ +H+ I +D+SV N+++ MY KCG I+ A L
Sbjct: 275 VDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERL 334
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F M R +SWT MI+GY + G EA+RLF M+ PD VT L+++ GC SG +
Sbjct: 335 FSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLV 394
Query: 376 ELGKWFDNYACS-GGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
E G+ + + CS G+K V ++D+ + G + +A+ L ++P E V W T+++
Sbjct: 395 EKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLS 454
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
C ++G+ ++ ++ LD N V ++ + AG+
Sbjct: 455 ACRVHGDLELGKEVGGILLRLD-SENPVNYVMMSNIYADAGY 495
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 108/192 (56%)
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF D+ + N LI MY KCG + A +FD M R VSWTA++ G+ Q G+ E+L LF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M +G P+ T + + CG L++G+ + G +V N++IDMYSKC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G I +A +F +P + ++SW MIAG + G +AL LF +M E+ + TF + L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 468 QACTHAGFLEKG 479
+AC+ G +++G
Sbjct: 182 KACSDLGAIKEG 193
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 306/576 (53%), Gaps = 34/576 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVD---MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+MIH ++K+ + + + +++ + D L A +F+ + + ++ WN M G
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A L L+ M +G+ + T L ++ +K + +H + +G D D+
Sbjct: 79 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 138
Query: 191 SVCNTWISAYAKCNDLKMAELVF-----RGI------------------------EEGLR 221
V + IS Y + L+ A VF R + E ++
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSWN++I G ++L ++ M+ RPD +T+VS++S+C ++ GR VH
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S +GF ++ ++N LI +Y KCG++++A LF+G+ + +SW +I GY
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 318
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNA 399
EAL LF M +GE P+ VT+LS++ C GA+E+G+W Y G+ + +
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 378
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY+KCG I A+++F ++ +++ SW MI G A++G A D+F +M + ++ P+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 438
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TF+ +L AC+H+G L+ G F M + Y++ P+L HY CM DLLG G KEA + +
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
+M ++ D IW +LL ACK++ N+E+GE A L ++EP + YV ++NIYA GRW+
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 558
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA +R ++ +KK PG S + I+ F + D
Sbjct: 559 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 252/531 (47%), Gaps = 80/531 (15%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R ++ AL L+ M + PN TFPF+ K+CAK F Q IHGH++
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 130
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLD-------------------------------CAYK 110
K + D++V T+++ MY + RL+ A K
Sbjct: 131 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 190
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD++P +DV SWNAMI G+A+ G ++ L LF M ++ D T++ + A +
Sbjct: 191 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 250
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G +++ + N I Y KC +++ A +F G+ + V+SWN++I
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL--SYKDVISWNTLI 308
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 309 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKG 368
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S +LI MY+KCGDI++A+ +FD + +R+ SW AMI G+A G + A +F
Sbjct: 369 VANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFS 428
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M PD +T + ++S C SG L+LG
Sbjct: 429 RMRKNEIEPDDITFVGLLSACSHSGMLDLG------------------------------ 458
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALN-----GEFVEALDLFHQMMELDLRPNRVTF 463
R +F ++ E ++ GC ++ G F EA ++ + M ++ P+ V +
Sbjct: 459 -----RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIW 510
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++L+AC +E G Y + K+ NP Y ++++ G+ E
Sbjct: 511 CSLLKACKMYANVELGESYAQNLIKIEPKNP--GSYVLLSNIYATAGRWNE 559
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 39/308 (12%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF---LFDG 318
+SLL +C ++L R++H+ I G ++ LI D + +F+
Sbjct: 6 LSLLHNCKTLQSL---RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + + W M G+A D AL L+ M + G +P+ T ++ C +S A G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT--------- 429
+ + G ++ V +LI MY + G + DAR++F + VVS+T
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182
Query: 430 ----------------------TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
MI+G A G EAL+LF +MM+ ++RP+ T ++V+
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC + +E G + + + L + + DL + G+++ A + + K D
Sbjct: 243 SACAQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-D 300
Query: 528 AGIWGTLL 535
W TL+
Sbjct: 301 VISWNTLI 308
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
+++ WN+ I A+ A +F RM+KN+IEP+++TF + AC+
Sbjct: 403 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS 450
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 287/542 (52%), Gaps = 49/542 (9%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM------------------ 146
L A LFD+MP+RDV SWNAM+ G+AQ G++++ +F M
Sbjct: 46 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQN 105
Query: 147 -------RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
RL +AD+ + + K L+ + F + D NT IS
Sbjct: 106 GRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRM--PERDEVSWNTMISG 163
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YA+ +L A+ +F E +R V +W +++ G D++ ++DG P+
Sbjct: 164 YAQNGELLEAQRLFE--ESPVRDVFTWTAMVSGYVQNGMLDEA-----RRVFDGM-PEKN 215
Query: 260 TVV--SLLSSCVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLISMYSKCGDIDSAR 313
+V ++++ V + + Q R + F+ +VS NT+I+ Y++ GDI AR
Sbjct: 216 SVSWNAIIAGYVQCKRMDQAREL--------FEAMPCQNVSSWNTMITGYAQNGDIAQAR 267
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
FD M R +SW A+I+GYAQ G +EAL LF M+ GE + T S +S C +
Sbjct: 268 NFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIA 327
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
ALELGK GL+ V NAL+ MY KCG+I DA +F + EK VVSW TMIA
Sbjct: 328 ALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIA 387
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A +G EAL LF M + + P+ VT + VL AC+H G ++KG YF MT+ Y +
Sbjct: 388 GYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGIT 447
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
HY+CM DLLGR G+L +A + +++MP + DA WG LL A +IH N E+GE A
Sbjct: 448 ANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKM 507
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+FE+EP ++ YV ++N+YA GRW V +R M+ VKK PG S V + K TFTV
Sbjct: 508 IFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTV 567
Query: 614 ED 615
D
Sbjct: 568 GD 569
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I +AL LF MK++ N TF CA+++ + +HG +V
Sbjct: 281 WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVV 340
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ S +V ++ MY KC +D AY +F+ + +++V SWN MI G+A+ GF ++ L
Sbjct: 341 KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 400
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIH 167
LF +M+ GI D VT++G+ A H
Sbjct: 401 LFESMKKTGILPDDVTMVGVLSACSH 426
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 139/288 (48%), Gaps = 29/288 (10%)
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++ +AR LFD M +R VSW AM+SGYAQ G + EA +F M + ++ M++
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNSISWNGMLA 100
Query: 368 GCGQSGALE-LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
Q+G +E + F++ A ++ N ++ Y K + DAR +F +PE+ V
Sbjct: 101 AYVQNGRIEDARRLFESKA-----DWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEV 155
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW TMI+G A NGE +EA LF + D+ T+ A++ G L++ F+ M
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGM 211
Query: 487 TKVYQVNPELNHYSCMADLLG--RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
PE N S A + G + ++ +A + ++MP + + W T++ +N
Sbjct: 212 -------PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYA--QNG 261
Query: 545 EIGEYVAYRLFELEPH-SAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
+I + A F+ P + + + YA G + +L MKR+
Sbjct: 262 DIAQ--ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRD 307
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 199/593 (33%), Positives = 311/593 (52%), Gaps = 41/593 (6%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY--KLFDKMPD 117
+ + C ++ F + IH I+K+ + +FVQ+ ++ A D +Y LF++
Sbjct: 34 LLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQ 90
Query: 118 R---DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
+V WN++I G++ L LF M G+Q + T L ++ AK
Sbjct: 91 HHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEG 150
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG----------------IEE 218
K +H+ + + + + V + I YA ++ A LVF + +
Sbjct: 151 KQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQ 210
Query: 219 G-------------LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
G ++ VVSWN++I G +F++++ + M P+ +T+V +L
Sbjct: 211 GCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVL 270
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
S+C + G+ + S GF ++ + N LI MY KCG+ D AR LFDG+ ++ +
Sbjct: 271 SACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVI 330
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SW MI GY+ +EAL LF M + P+ VT L ++ C GAL+LGKW Y
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAY- 389
Query: 386 CSGGLKD--NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
L++ N + +LIDMY+KCG I A +F ++ + + SW M++G A++G
Sbjct: 390 IDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAER 449
Query: 444 ALDLFHQMMELDL-RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
AL LF +M+ L RP+ +TF+ VL ACT AG ++ G YF M + Y ++P+L HY CM
Sbjct: 450 ALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCM 509
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
DLL R K +EA +++M ++ D IWG+LL ACK H +E GEYVA RLF+LEP +A
Sbjct: 510 IDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENA 569
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+V ++NIYA GRWD VA +RT + +KK PG + + I+G F V D
Sbjct: 570 GAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGD 622
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 230/470 (48%), Gaps = 39/470 (8%)
Query: 11 NKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF 70
N+ + + WNS IR + +L LF RM ++PN+ TFPF+ K+C K
Sbjct: 88 NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR-------------------------- 104
+ +H H +K + V T+++ MYA
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 105 -----LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
LD A +LFD++P +DV SWNAMI G+ Q G E+ + FY M+ + + T++
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
+ A H + L K + S+ G +++ + N I Y KC + +A +F GIEE
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEE- 326
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
+ V+SWN++IGG +Y ++++L + M+ +P+ T + +L +C C AL G+
Sbjct: 327 -KDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW 385
Query: 280 VHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VH++ + + S+ +LI MY+KCG I++A +F M R SW AM+SG+A G
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHG 445
Query: 339 DLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMV 396
+ AL LF M G PD +T + ++S C Q+G ++LG ++F + G+ +
Sbjct: 446 HAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQH 505
Query: 397 CNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNG--EFVE 443
+ID+ ++ +A L + E W ++++ C +G EF E
Sbjct: 506 YGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGE 555
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V +A++ F M++ ++ PN T + AC + I +
Sbjct: 231 WNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVR 290
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F S++ + ++DMY KC D A +LFD + ++DV SWN MI G++ + E+ L
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF-GIHIGVDADVSVCNTWISAY 200
LF M ++ + VT +G+ A L L K VH++ ++ ++ S+ + I Y
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMY 410
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVT 259
AKC ++ AE VFR + R + SWN+++ G + +L + M+ G FRPD
Sbjct: 411 AKCGCIEAAERVFRSMHS--RNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDI 468
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T V +LS+C Q LV DL ++I Y G+
Sbjct: 469 TFVGVLSAC------TQAGLV---------DLGHQYFRSMIQDY--------------GI 499
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ + + MI A+ +EA L ME PD S++S C G +E G+
Sbjct: 500 SPKLQ-HYGCMIDLLARAEKFEEAEILMKNMEME---PDGAIWGSLLSACKAHGRVEFGE 555
Query: 380 W 380
+
Sbjct: 556 Y 556
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 319/594 (53%), Gaps = 3/594 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I ++L F M+ E N+ T + C+ + + + + IHG
Sbjct: 363 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 422
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+VK S++ + T++ +Y++ R + A +F M +RD+ SWN+M+ + Q G
Sbjct: 423 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 482
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L + + +G + VT A + + L K VH+ I G + V N ++
Sbjct: 483 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVT 542
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y K + A+ V + + + R V+WN++IGG ++ ++++ Y+ + G +
Sbjct: 543 MYGKLGMMMEAKKVLQTMPQPDR--VTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 600
Query: 259 TTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+VS+L +C P+ L++ G +H+H + GF+ D V N+LI+MY+KCGD++S+ ++FD
Sbjct: 601 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 660
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
G+ +++ ++W AM++ A G +EAL++F M G D + ++ LE
Sbjct: 661 GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEE 720
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ G + ++ V NA +DMY KCG + D ++ ++ +SW +I+ A
Sbjct: 721 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR 780
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G F +A + FH+M++L +P+ VTF+++L AC H G +++G Y++ MT+ + V P +
Sbjct: 781 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIE 840
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
H C+ DLLGR G+L A F++ MP+ + W +LL AC+IH N+E+ A L EL
Sbjct: 841 HCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLEL 900
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+P + YV +N+ A G+W+ V NLR M N +KK P S V + K +F
Sbjct: 901 DPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSF 954
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/580 (26%), Positives = 281/580 (48%), Gaps = 9/580 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + D + L +++RM++ + N TF + +C L D + + GHI+
Sbjct: 265 WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII 324
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F + V +++ M++ ++ A +FD M + D+ SWNAMI +A G + L
Sbjct: 325 QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 384
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F+ MR + + + T+ L +L + +H + +G+D++V +CNT ++ Y+
Sbjct: 385 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 444
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ + AELVF+ + E R ++SWNS++ K D L ++ G + T
Sbjct: 445 EAGRSEDAELVFQAMTE--RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 502
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L++C PE L++ ++VH+ I GF + V N L++MY K G + A+ + M
Sbjct: 503 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 562
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC-GQSGALELGKW 380
RV+W A+I G+A+ + +EA++ + + G + +T++S++ C L+ G
Sbjct: 563 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 622
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G + + V N+LI MY+KCG + + +F L K+ ++W M+A A +G
Sbjct: 623 IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 682
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL +F +M + + ++ +F L A + LE+G L+ K+ +L+ +
Sbjct: 683 GEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKL-GFESDLHVTN 741
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
D+ G+ G++ + L + PI W L+ A H + + + +L P
Sbjct: 742 AAMDMYGKCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 800
Query: 561 S-AAPYVEMANIYALGGRWD-GVANLRTMMKRNQVKKFPG 598
+V + + GG D G+A +M + V FPG
Sbjct: 801 PDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV--FPG 838
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 256/521 (49%), Gaps = 11/521 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
N + FP K ++++ + + +H + IF T+++MY+K ++ A +F
Sbjct: 95 NAVNFPL--KGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 152
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D+M R+ ASW+ M+ G+ ++G E+ + LF M +G++ + V L A + +++
Sbjct: 153 DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA 212
Query: 173 LLK-SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
VH F + G+ DV V + Y + A+ +F + + VVSW S++
Sbjct: 213 DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD--HNVVSWTSLMV 270
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + + LN Y+ M +G + T ++ SSC E V G V H I YGF+
Sbjct: 271 GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFED 330
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
VSV N+LISM+S ++ A ++FD M + +SW AMIS YA G E+LR F M
Sbjct: 331 SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 390
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ T+ S++S C L+ G+ GL NV +CN L+ +YS+ G
Sbjct: 391 HLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSE 450
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
DA +F A+ E+ ++SW +M+A +G+ ++ L + +++++ N VTF + L AC+
Sbjct: 451 DAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACS 510
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
+ L + + + V + L + + + G+ G + EA +Q+MP + D W
Sbjct: 511 NPECLIES-KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTW 568
Query: 532 GTLLCACKIHRNIEIGEYV-AYRLFELEPHSAAPYVEMANI 571
L+ N E E V AY+L E A Y+ M ++
Sbjct: 569 NALIGGHA--ENEEPNEAVKAYKLIR-EKGIPANYITMVSV 606
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 227/452 (50%), Gaps = 5/452 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ--MIHGH 79
W++ + V +A+ LF +M +EPN + AC++ S ++ + +HG
Sbjct: 163 WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSR-SGYMADEGFQVHGF 221
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+VK+ D++V T +V Y + A KLF++MPD +V SW +++VG++ G +V
Sbjct: 222 VVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEV 281
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L ++ MR G+ + T +T + + L V I G + VSV N+ IS
Sbjct: 282 LNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM 341
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
++ + ++ A VF + E ++SWN++I + +SL + M + + T
Sbjct: 342 FSSFSSVEEACYVFDHMNEC--DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNST 399
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ SLLS C + L GR +H + G D +V + NTL+++YS+ G + A +F M
Sbjct: 400 TLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM 459
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+R +SW +M++ Y Q G + L++ + G+V + VT S ++ C L K
Sbjct: 460 TERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESK 519
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G D ++V NAL+ MY K G + +A+++ +P+ V+W +I G A N
Sbjct: 520 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENE 579
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
E EA+ + + E + N +T ++VL AC+
Sbjct: 580 EPNEAVKAYKLIREKGIPANYITMVSVLGACS 611
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 186/590 (31%), Positives = 293/590 (49%), Gaps = 2/590 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + AL LF +M + + P+ AC+ L + HG+
Sbjct: 183 WTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAY 242
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D V ++D+Y KC RL A KLFD M +R++ SW MI G+ Q + +
Sbjct: 243 RIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMA 302
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F+ + G Q D + + + + VH+ I +++D V N+ I YA
Sbjct: 303 MFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYA 362
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + E +S+N++I G + +++ + M Y +P T
Sbjct: 363 KCEHLTEARAVFEALAE--DDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTF 420
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VSLL A+ + +H + G LD+ ++LI +YSK ++ A+ +F+ M +
Sbjct: 421 VSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHN 480
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R V W AMI G AQ +EA++LF ++ +G P+ T +++++ ++ G+ F
Sbjct: 481 RDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQF 540
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G + V NALIDMY+KCG I + R LF + K V+ W +MI+ A +G+
Sbjct: 541 HAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQA 600
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL +F M + PN VTF+ VL AC HAG +++G +F+ M Y + P HY+
Sbjct: 601 EEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYAS 660
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ +L GR GKL A +F++ MPI+ A +W +LL AC + N+EIG Y +P
Sbjct: 661 VVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPAD 720
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+ P V M+NIYA G W LR M V K PG S + + + TF
Sbjct: 721 SGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTF 770
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 255/533 (47%), Gaps = 10/533 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK--NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
W S I A+ LF ++ PN +ACA+ + Q +HG
Sbjct: 80 WGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGV 139
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
V+ +++V T ++++YAK +D A +FD +P ++ +W A+I G++Q+G
Sbjct: 140 AVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVA 199
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L LF M L G++ D + A L + H + I V+ D SV N I
Sbjct: 200 LELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDL 259
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC+ L +A +F +E R +VSW ++I G +++ + + +G++PDV
Sbjct: 260 YCKCSRLSLARKLFDCMEN--RNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVF 317
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
S+L+SC A+ QGR VH+H I + D V N+LI MY+KC + AR +F+ +
Sbjct: 318 ACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEAL 377
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ +S+ AMI GY++ GDL A+ +F M P +T +S++ A+EL K
Sbjct: 378 AEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSK 437
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G ++ ++LID+YSK + DA+ +F + + +V W MI G A N
Sbjct: 438 QIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNE 497
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ EA+ LF+Q+ L PN TF+A++ T A L + ++ + + +H+
Sbjct: 498 QGEEAVKLFNQLQVSGLAPNEFTFVALV---TVASTLVSMFHGQQFHAQIIKAGADSDHH 554
Query: 500 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ + D+ + G +KE +S + D W +++ H E YV
Sbjct: 555 VSNALIDMYAKCGFIKEGRLLFES-TLGKDVICWNSMISTYAQHGQAEEALYV 606
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 214/417 (51%), Gaps = 6/417 (1%)
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ H V + D+F+ ++ Y+K R+ A +LFD+MP +++ SW + I AQ G
Sbjct: 32 LAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHG 91
Query: 135 FLEKVLCLFYNM-RLVGIQA--DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
E + LF R G +A +F+ L +A ++ +S + VH + IG+D +V
Sbjct: 92 CEEDAVALFAAFQRASGGEAPNEFLLASAL-RACAQSRAVSFGQQVHGVAVRIGLDGNVY 150
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V I+ YAK + A LVF + ++ V+W ++I G + + +L + M
Sbjct: 151 VGTALINLYAKVGCIDAAMLVFDALP--VKNPVTWTAVITGYSQIGQGGVALELFGKMGL 208
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
DG RPD + S +S+C L GR H + + D SVIN LI +Y KC +
Sbjct: 209 DGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSL 268
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR LFD M +R VSWT MI+GY Q EA+ +F+ + G PD+ S+++ CG
Sbjct: 269 ARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGS 328
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
A+ G+ +A L+ + V N+LIDMY+KC + +AR +F AL E +S+ M
Sbjct: 329 LAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAM 388
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
I G + G+ A+D+F +M L+P+ +TF+++L + +E L+ K
Sbjct: 389 IEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVK 445
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 217/437 (49%), Gaps = 4/437 (0%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
SL +L + + W + I + + +A+ +F ++ + +P+ I +C
Sbjct: 267 SLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSC 326
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
L+ + +H H +K+ SD +V+ +++DMYAKC+ L A +F+ + + D S+N
Sbjct: 327 GSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYN 386
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
AMI G++++G L + +F MR ++ +T + L + + L K +H +
Sbjct: 387 AMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKS 446
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G D+ ++ I Y+K + ++ A+ VF + R +V WN++I G ++ ++++
Sbjct: 447 GTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHN--RDMVIWNAMIFGLAQNEQGEEAVK 504
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+ + G P+ T V+L++ ++ G+ H+ I G D D V N LI MY+
Sbjct: 505 LFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYA 564
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCG I R LF+ + + W +MIS YAQ G +EAL +F M G P+ VT +
Sbjct: 565 KCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVG 624
Query: 365 MISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-E 422
++S C +G ++ G + FD ++ ++++++ + G + A+E +P E
Sbjct: 625 VLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIE 684
Query: 423 KTVVSWTTMIAGCALNG 439
W ++++ C L G
Sbjct: 685 PAAAVWRSLLSACHLFG 701
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 293/531 (55%), Gaps = 9/531 (1%)
Query: 87 SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM 146
S+++V T++++MY K + A ++FD MP R+ SW+ M+ G+A E+ LF M
Sbjct: 45 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 104
Query: 147 --RLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAK 202
+++FV L+ ++ L LL + +H + G+ VSV N+ ++ YAK
Sbjct: 105 LEECPSEKSEFVATAVLSAVSVP---LGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAK 161
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
+ A VF E R ++W+++I G + D +++ + M GF P T V
Sbjct: 162 AGCMGAAFHVFESSRE--RNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFV 219
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+L++ AL G+ H + GF++ + V + L+ MY+KCG I A+ FD + +
Sbjct: 220 GVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEV 279
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
V WTAM+SG+ Q G+ +EAL L+ M+ G +P T+ S + C ALE GK
Sbjct: 280 DIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLH 339
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
GL V +AL MYSKCG++ D +F +P++ V++W ++I+G + NG
Sbjct: 340 TQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGN 399
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
ALDLF +M P+ +TF+ +L AC+H G +++GW YF+LMTK Y + P L+HY+CM
Sbjct: 400 GALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACM 459
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
D+L R G LKEA DF++S+ I +W +L AC+ R+ ++G Y RL EL +
Sbjct: 460 VDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDS 519
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+ Y+ ++NIYA +W+ V +R +M+ V K PG S V +N + F V
Sbjct: 520 SAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVV 570
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I EA A+ +F +M P TF + A + L + HG +V
Sbjct: 183 WSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMV 242
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F I+V++ +VDMYAKC + A + FD++ + D+ W AM+ G Q G E+ L
Sbjct: 243 KLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALT 302
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ M GI T+ +A L K +H+ + G+ V + + Y+
Sbjct: 303 LYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYS 362
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +L+ VFR I + R V++WNSII G + + +L+ + M +G PD T
Sbjct: 363 KCGNLEDGMSVFRRIPD--RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITF 420
Query: 262 VSLLSSC 268
+++L +C
Sbjct: 421 INILCAC 427
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + V E +AL L+ RM K I P+ T +ACA ++ + +H IV
Sbjct: 284 WTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIV 343
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K V + + MY+KC L+ +F ++PDRDV +WN++I GF+Q G L
Sbjct: 344 KYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALD 403
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIH 167
LF M++ G D +T + + A H
Sbjct: 404 LFEEMKMEGTIPDNITFINILCACSH 429
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 320/605 (52%), Gaps = 16/605 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM--KKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ WNS + + +++ AL FR M + + P +F + A A++ +
Sbjct: 84 VASWNSLL-NPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVA 142
Query: 77 HGHIVKSPFWS---DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
H K P S ++FV T +++MY K + A ++FD+MP R+ SW AM+ G+A
Sbjct: 143 HAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATG 202
Query: 134 GFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI--GVDAD 189
E+ LF M + +FV L+ ++ L LL V G+ + G+
Sbjct: 203 KCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVP---LGLLIGVQLHGLVLKDGLVGF 259
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
VSV N+ ++ YAK + A VF +E R ++W+++I G + D + + M
Sbjct: 260 VSVENSLVTMYAKAECMDAAMAVFGSSKE--RNSITWSAMITGYAQNGEADCAATMFLQM 317
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
GF P T V +L++ ALV G+ H + GF+ V V + L+ MY+KCG
Sbjct: 318 HSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCT 377
Query: 310 DSARFLFDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
A+ F + D V WTAMI+G+ Q G+ +EAL L+ M+ G +P +TV S++
Sbjct: 378 GDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRA 437
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C ALE GK G V AL MYSKCG++ D+ +F +P++ ++SW
Sbjct: 438 CACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISW 497
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
++I+G + +G +ALDLF +M + P+ +TF+ VL AC+H G +++GW YF M+K
Sbjct: 498 NSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSK 557
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
Y + P+L+HY+C+ D+L R G+LKEA DF++S+ I +W +L AC+ R+ ++G
Sbjct: 558 DYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGA 617
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
Y +L EL ++ Y+ ++NIYA +W+ V +R +M+ V K PG S V +N +
Sbjct: 618 YAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQV 677
Query: 609 CTFTV 613
F V
Sbjct: 678 NVFVV 682
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 228/482 (47%), Gaps = 26/482 (5%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDR--LDCAYKLFDKMPD--RDVASWNAMIVGFA 131
+HG +KS S V +++ Y R L A+ +F +P RDVASWN+++ +
Sbjct: 36 LHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNPLS 95
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFV-----TVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+ + L + R + D V + + AA S H+F +
Sbjct: 96 R----HQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPS 151
Query: 187 DA---DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
+ +V V ++ Y K + A VF + R VSW +++ G G +++
Sbjct: 152 SSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPH--RNAVSWAAMVSGYATGKCSEEAF 209
Query: 244 NFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
+R M+ + + ++LS+ P L+ G +H + G VSV N+L++M
Sbjct: 210 ELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTM 269
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+K +D+A +F +R ++W+AMI+GYAQ G+ D A +F M +AG P T
Sbjct: 270 YAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTF 329
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ +++ GAL +GK G + V V +AL+DMY+KCG GDA++ F+ L +
Sbjct: 330 VGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYD 389
Query: 423 -KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
VV WT MI G NGE EAL L+ +M + + P+ +T +VL+AC LE G
Sbjct: 390 VDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGK- 448
Query: 482 YFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
L ++ + L + ++ + + G L++++ + MP + D W +++
Sbjct: 449 --QLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDR-DIISWNSIISGFS 505
Query: 540 IH 541
H
Sbjct: 506 QH 507
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 162/371 (43%), Gaps = 16/371 (4%)
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCND----LKMAELVFRGIEEGLRTVVSWNSIIG 231
++H + + G + V N+ I+ Y C+ L A VF I GLR V SWNS++
Sbjct: 35 ALHGWALKSGAASHTPVSNSLITFY--CSPPRPLLGAAFAVFADIPAGLRDVASWNSLLN 92
Query: 232 GCTYGDKFDDSLNFYRHMI--YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
+ +L+ +R M+ D P + ++ ++ + G + H+
Sbjct: 93 PLSRHQPL-AALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPS 151
Query: 290 DL---DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
+V V L++MY K G I AR +FD M R VSW AM+SGYA +EA L
Sbjct: 152 SSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFEL 211
Query: 347 FFAM--EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
F M E E + V +++S L +G GL V V N+L+ MY
Sbjct: 212 FRLMLQECPLEKNEFVAT-AVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMY 270
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+K + A +F + E+ ++W+ MI G A NGE A +F QM P TF+
Sbjct: 271 AKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFV 330
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
+L A + G L G LM K+ ++ S + D+ + G +A D +
Sbjct: 331 GILNASSDMGALVVGKQAHGLMVKL-GFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYD 389
Query: 525 KSDAGIWGTLL 535
D IW ++
Sbjct: 390 VDDVVIWTAMI 400
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+++Y + W + I V E +AL+L+ RM K + P+ LT + +ACA L+
Sbjct: 384 FHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAA 443
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ +H I+K F V T + MY+KC L+ + +F +MPDRD+ SWN++I G
Sbjct: 444 LEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISG 503
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
F+Q G L LF M+L GI D +T + + A H
Sbjct: 504 FSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSH 541
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 319/594 (53%), Gaps = 3/594 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I ++L F M+ E N+ T + C+ + + + + IHG
Sbjct: 1013 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 1072
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+VK S++ + T++ +Y++ R + A +F M +RD+ SWN+M+ + Q G
Sbjct: 1073 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 1132
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L + + +G + VT A + + L K VH+ I G + V N ++
Sbjct: 1133 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVT 1192
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y K + A+ V + + + R V+WN++IGG ++ ++++ Y+ + G +
Sbjct: 1193 MYGKLGMMMEAKKVLQTMPQPDR--VTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 1250
Query: 259 TTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+VS+L +C P+ L++ G +H+H + GF+ D V N+LI+MY+KCGD++S+ ++FD
Sbjct: 1251 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 1310
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
G+ +++ ++W AM++ A G +EAL++F M G D + ++ LE
Sbjct: 1311 GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEE 1370
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ G + ++ V NA +DMY KCG + D ++ ++ +SW +I+ A
Sbjct: 1371 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR 1430
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G F +A + FH+M++L +P+ VTF+++L AC H G +++G Y++ MT+ + V P +
Sbjct: 1431 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIE 1490
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
H C+ DLLGR G+L A F++ MP+ + W +LL AC+IH N+E+ A L EL
Sbjct: 1491 HCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLEL 1550
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+P + YV +N+ A G+W+ V NLR M N +KK P S V + K +F
Sbjct: 1551 DPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSF 1604
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 180/536 (33%), Positives = 277/536 (51%), Gaps = 3/536 (0%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+IH H++ + F SD+ + T ++ Y K + A +FD MP+R V SW AM+ G++Q
Sbjct: 50 HLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQN 109
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G EK LF +MR G++A+ T +A + L + V ++ V
Sbjct: 110 GRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVK 169
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ + ++KC ++ A +F + E R VVSWN++IGG DDS +R M+ G
Sbjct: 170 SALVDFHSKCGKMEDASYLFGTMME--RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 227
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T+ S+L + L+ +H G+ V LI+ Y+K G + SA+
Sbjct: 228 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 287
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
L GM + S TA+I+GYA +G +AL LF M D V + SM++ C
Sbjct: 288 DLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANL 347
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
+ LG +A +V + NALIDMY+K G I DA+ F + EK V+SWT++I
Sbjct: 348 ASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLI 407
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G A +G A+ L+ +M +PN VTFL++L AC+H G +G FN M Y +
Sbjct: 408 SGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNI 467
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P HYSCM DL R+G L+EA + + + IK +A +WG +L A I+ + +G+ A
Sbjct: 468 KPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAAS 527
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
LF ++P ++ YV +A+IY+ G WD +R +M+ KK G S K+
Sbjct: 528 NLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKKS 583
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/580 (26%), Positives = 281/580 (48%), Gaps = 9/580 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + D + L +++RM++ + N TF + +C L D + + GHI+
Sbjct: 915 WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII 974
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F + V +++ M++ ++ A +FD M + D+ SWNAMI +A G + L
Sbjct: 975 QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 1034
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F+ MR + + + T+ L +L + +H + +G+D++V +CNT ++ Y+
Sbjct: 1035 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 1094
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ + AELVF+ + E R ++SWNS++ K D L ++ G + T
Sbjct: 1095 EAGRSEDAELVFQAMTE--RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 1152
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L++C PE L++ ++VH+ I GF + V N L++MY K G + A+ + M
Sbjct: 1153 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 1212
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC-GQSGALELGKW 380
RV+W A+I G+A+ + +EA++ + + G + +T++S++ C L+ G
Sbjct: 1213 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 1272
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G + + V N+LI MY+KCG + + +F L K+ ++W M+A A +G
Sbjct: 1273 IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 1332
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EAL +F +M + + ++ +F L A + LE+G L+ K+ +L+ +
Sbjct: 1333 GEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKL-GFESDLHVTN 1391
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
D+ G+ G++ + L + PI W L+ A H + + + +L P
Sbjct: 1392 AAMDMYGKCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 1450
Query: 561 -SAAPYVEMANIYALGGRWD-GVANLRTMMKRNQVKKFPG 598
+V + + GG D G+A +M + V FPG
Sbjct: 1451 PDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV--FPG 1488
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 256/521 (49%), Gaps = 11/521 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
N + FP K ++++ + + +H + IF T+++MY+K ++ A +F
Sbjct: 745 NAVNFPL--KGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 802
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D+M R+ ASW+ M+ G+ ++G E+ + LF M +G++ + V L A + +++
Sbjct: 803 DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA 862
Query: 173 LLK-SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
VH F + G+ DV V + Y + A+ +F + + VVSW S++
Sbjct: 863 DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD--HNVVSWTSLMV 920
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + + LN Y+ M +G + T ++ SSC E V G V H I YGF+
Sbjct: 921 GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFED 980
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
VSV N+LISM+S ++ A ++FD M + +SW AMIS YA G E+LR F M
Sbjct: 981 SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 1040
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
+ T+ S++S C L+ G+ GL NV +CN L+ +YS+ G
Sbjct: 1041 HLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSE 1100
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
DA +F A+ E+ ++SW +M+A +G+ ++ L + +++++ N VTF + L AC+
Sbjct: 1101 DAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACS 1160
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
+ L + + + V + L + + + G+ G + EA +Q+MP + D W
Sbjct: 1161 NPECLIES-KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTW 1218
Query: 532 GTLLCACKIHRNIEIGEYV-AYRLFELEPHSAAPYVEMANI 571
L+ N E E V AY+L E A Y+ M ++
Sbjct: 1219 NALIGGHA--ENEEPNEAVKAYKLIR-EKGIPANYITMVSV 1256
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 227/452 (50%), Gaps = 5/452 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ--MIHGH 79
W++ + V +A+ LF +M +EPN + AC++ S ++ + +HG
Sbjct: 813 WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSR-SGYMADEGFQVHGF 871
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+VK+ D++V T +V Y + A KLF++MPD +V SW +++VG++ G +V
Sbjct: 872 VVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEV 931
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L ++ MR G+ + T +T + + L V I G + VSV N+ IS
Sbjct: 932 LNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM 991
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
++ + ++ A VF + E ++SWN++I + +SL + M + + T
Sbjct: 992 FSSFSSVEEACYVFDHMNEC--DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNST 1049
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ SLLS C + L GR +H + G D +V + NTL+++YS+ G + A +F M
Sbjct: 1050 TLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM 1109
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+R +SW +M++ Y Q G + L++ + G+V + VT S ++ C L K
Sbjct: 1110 TERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESK 1169
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
G D ++V NAL+ MY K G + +A+++ +P+ V+W +I G A N
Sbjct: 1170 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENE 1229
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
E EA+ + + E + N +T ++VL AC+
Sbjct: 1230 EPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 231/478 (48%), Gaps = 14/478 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W + + KA +LF M+ ++ N T+ +AC L +
Sbjct: 95 SVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQ 154
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G I K F ++FV++ +VD ++KC +++ A LF M +RDV SWNAMI G+A GF +
Sbjct: 155 GCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD 214
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
C+F +M G+ D T+ + +A+ L + +H +G + V I
Sbjct: 215 DSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLI 274
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRP 256
+AYAK L+ A+ + +G+ + + + S ++I G + + D+L+ ++ M
Sbjct: 275 NAYAKNGSLRSAKDLRKGMLK--KDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGM 332
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + S+L+ C + G +H+ + Y DV++ N LI MY+K G+I+ A+ F
Sbjct: 333 DDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAF 392
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M ++ +SWT++ISGYA+ G A+ L+ ME+ G P+ VT LS++ C +G
Sbjct: 393 DEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTA 452
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAG 434
G + F+N +K + ++D++++ G + +A L + K S W ++
Sbjct: 453 EGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGA 512
Query: 435 CALNGEFV----EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
++ G A +LF+ E N V ++ + + AG + W LM +
Sbjct: 513 SSIYGYMSLGKEAASNLFNMQPE-----NSVNYVVLASIYSAAGLWDDAWKIRKLMEE 565
>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
Length = 833
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 295/565 (52%), Gaps = 11/565 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ + +A+ LF+RM +EP ++F + A + IH I
Sbjct: 270 WNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMI 329
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ S I V +V MY +C + A ++F M RD+ SWNAMI +AQ G +V+
Sbjct: 330 QERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVV 389
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF+ MR + D +T + A + L ++VH + G + +SV N + Y
Sbjct: 390 NLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLY 449
Query: 201 AKCNDLKMAEL----VFRGIEEGL--RTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDG 253
+ C+ + V GI E + R V+SWN++I G GD F +L+ ++ M+ +G
Sbjct: 450 SSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFS-ALSIFKRMLLEG 508
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDS 311
R + T +SLLS C L QG +H I+ +L D V +++MY KCG++D+
Sbjct: 509 IRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDT 568
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR LF+ R SW +MIS YA G ++A L M G +PD VT +++++ C
Sbjct: 569 ARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVA 628
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
GA+ GK GL+ + +V NAL++ YSKCG++ A LF AL + VVSW +
Sbjct: 629 GGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGI 688
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
IAG A NG EAL M + +RP+ +TFL +L A +HAGFL +G F M ++
Sbjct: 689 IAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHE 748
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ + HY CM DLLGR G++ +A FV +M + W TLL AC++H + E + VA
Sbjct: 749 LERGVEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKEVSWMTLLSACEVHGDEERAKRVA 808
Query: 552 YRLFELEPHSAAPYVEMANIYALGG 576
+ E+ P ++ YV ++N+YA G
Sbjct: 809 GSIVEMNPQHSSAYVALSNLYATCG 833
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 261/545 (47%), Gaps = 20/545 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W + I +AL LF M + ++PN +TF + +AC +
Sbjct: 60 RERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGK 119
Query: 75 MIHGHIVKSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
IH + SD+ V ++ MY KC+R D A +F +M +RD+ SWN I A+
Sbjct: 120 QIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAES 179
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G L L +M+L G+ D VT + A I ++ LS + +H+ + G++ DV +
Sbjct: 180 GDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLG 239
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ Y +C L+ A +F + E R VVSWN+++ CT F +++ ++ M+
Sbjct: 240 TALVTMYGRCGCLESAREIFHRMPE--RNVVSWNAMVASCTLNAHFAEAIELFKRMVAVA 297
Query: 254 F-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
P + +++L++ PEAL +GR +H+ + V N L++MY +CG + A
Sbjct: 298 MVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDA 357
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F M R VSW AMIS YAQ G E + LF M A PD +T L + C +
Sbjct: 358 ERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEI 417
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE--------LFYALPEKT 424
L+ G+ + + G + V NA + +YS C S + +F ++ +
Sbjct: 418 RDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARD 477
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
V+SW TMI G G+ AL +F +M+ +R N+VTF+++L C FL +G
Sbjct: 478 VISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGE---T 534
Query: 485 LMTKVYQVNPELNH----YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
+ +V PEL+ + + ++ G+ G+L A + ++ A W +++ A +
Sbjct: 535 IHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLAS-WNSMISAYAL 593
Query: 541 HRNIE 545
H E
Sbjct: 594 HGRAE 598
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 226/449 (50%), Gaps = 11/449 (2%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
+ + +AC + +HGH+ + +F +V+MY +C LD A K+FD+M
Sbjct: 1 YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+RDV SW AMI +AQ G + L LF M + + VT + L +A + L K
Sbjct: 61 ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQ 120
Query: 177 VHSFGIHIG-VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+H+ + +++DV V N + Y KC +A VF + E R ++SWN+ I
Sbjct: 121 IHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRE--RDLISWNNAIAANAE 178
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+ +L + M +G PD T VS L++C+ +L GRL+H+ + G + DV +
Sbjct: 179 SGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVL 238
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
L++MY +CG ++SAR +F M +R VSW AM++ EA+ LF M A
Sbjct: 239 GTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAM 298
Query: 356 V-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
V P V+ +++++ AL G+ L + V NAL+ MY +CG +GDA
Sbjct: 299 VEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAE 358
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F A+ + +VSW MI+ A +G E ++LFH+M + P+R+TFL L AC
Sbjct: 359 RVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIR 418
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
L+ G V+ ++ E SC++
Sbjct: 419 DLDSG-------RTVHHLSVESGFGSCIS 440
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 175/346 (50%), Gaps = 6/346 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N ++ Y +C+ L A VF + E R VVSW ++I +L+ + M
Sbjct: 37 NRLVNMYRRCSSLDEARKVFDRMRE--RDVVSWTAMISAYAQTGHQRQALDLFTEMAGSS 94
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSA 312
P+ T ++LL +C PE L G+ +H+ + DV V N ++ MY KC D A
Sbjct: 95 LDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLA 154
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F M +R +SW I+ A+ GD L L +M+ G PD VT +S ++ C S
Sbjct: 155 MAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGS 214
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
+L G+ G++ +V++ AL+ MY +CG + ARE+F+ +PE+ VVSW M+
Sbjct: 215 RSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMV 274
Query: 433 AGCALNGEFVEALDLFHQMMELDL-RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
A C LN F EA++LF +M+ + + P RV+F+ VL A T L +G + M + Q
Sbjct: 275 ASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGR-RIHAMIQERQ 333
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ ++ + + + GR G + +A +M + D W ++ A
Sbjct: 334 LLSQIEVANALVTMYGRCGGVGDAERVFSAME-RRDLVSWNAMISA 378
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 141/279 (50%), Gaps = 3/279 (1%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
L+ +C AL QGR VH H + D + N L++MY +C +D AR +FD M +R
Sbjct: 4 LMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERD 63
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
VSWTAMIS YAQ G +AL LF M + P+ VT L+++ C LE GK
Sbjct: 64 VVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHA 123
Query: 384 YACS-GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+ L+ +V V NA++ MY KC A +F + E+ ++SW IA A +G++
Sbjct: 124 RVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYT 183
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
L L M + P++VTF++ L AC + L G L+ + + ++ + +
Sbjct: 184 FTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLE-RGMEGDVVLGTAL 242
Query: 503 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ GR G L+ A + MP ++ W ++ +C ++
Sbjct: 243 VTMYGRCGCLESAREIFHRMPERNVVS-WNAMVASCTLN 280
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 268/479 (55%), Gaps = 5/479 (1%)
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L LF+ M + + D T + + LS + HS + + +D ++ I+A
Sbjct: 107 LSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITA 166
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYDGFRPDV 258
YA+C + A VF I R VSWNS+I G +++ +R M DGF PD
Sbjct: 167 YARCGLVASARKVFDEIPH--RDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDE 224
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
++VSLL +C L GR V + G L+ + + LISMY+KCG+++SAR +FDG
Sbjct: 225 MSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDG 284
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R ++W A+ISGYAQ G DEA+ LF M+ + +T+ +++S C GAL+LG
Sbjct: 285 MAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLG 344
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K D YA G + ++ V ALIDMY+K GS+ +A+ +F +P+K SW MI+ A +
Sbjct: 345 KQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAH 404
Query: 439 GEFVEALDLFHQMMEL--DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
G+ EAL LF M + RPN +TF+ +L AC HAG +++G+ F++M+ ++ + P++
Sbjct: 405 GKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKI 464
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HYSCM DLL R G L EA D ++ MP K D G LL AC+ +N++IGE V + E
Sbjct: 465 EHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILE 524
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++P ++ Y+ + IYA W+ A +R +M++ + K PG S + + F D
Sbjct: 525 VDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGD 583
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 207/403 (51%), Gaps = 7/403 (1%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL LF RM + P+N TFPF +CA L+ ++ H + K SD +++
Sbjct: 106 ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLIT 165
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFV 156
YA+C + A K+FD++P RD SWN+MI G+A+ G + + +F M R G + D +
Sbjct: 166 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 225
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+++ L A L L + V F + G+ + + + IS YAKC +L+ A +F G+
Sbjct: 226 SLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGM 285
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R V++WN++I G D+++ + M D + T+ ++LS+C AL
Sbjct: 286 --AARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDL 343
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ + + GF D+ V LI MY+K G +D+A+ +F M + SW AMIS A
Sbjct: 344 GKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAA 403
Query: 337 KGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 393
G EAL LF M E G P+ +T + ++S C +G ++ G + FD + GL
Sbjct: 404 HGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 463
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
+ + ++D+ ++ G + +A +L +PEK V+ ++ C
Sbjct: 464 IEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGAC 506
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 170/362 (46%), Gaps = 38/362 (10%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS I A +A+ +FR M + D EP+ ++ + AC +L D + + G
Sbjct: 190 SWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGF 249
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+V+ + ++ + ++ MYAKC L+ A ++FD M RDV +WNA+I G+AQ G ++
Sbjct: 250 VVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEA 309
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF+ M+ + A+ +T+ + A L L K + + G D+ V I
Sbjct: 310 ILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDM 369
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD--GFRPD 257
YAK L A+ VF+ + + + SWN++I K ++L+ ++HM + G RP+
Sbjct: 370 YAKSGSLDNAQRVFKDMPQ--KNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPN 427
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T V LLS+C VH+ + G+ L +++TL + K
Sbjct: 428 DITFVGLLSAC-----------VHAGLVDEGYRL-FDMMSTLFGLVPKIEH--------- 466
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
++ M+ A+ G L EA L M E PD VT+ +++ C +++
Sbjct: 467 ---------YSCMVDLLARAGHLYEAWDLIRKMP---EKPDKVTLGALLGACRSKKNVDI 514
Query: 378 GK 379
G+
Sbjct: 515 GE 516
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/527 (33%), Positives = 288/527 (54%), Gaps = 5/527 (0%)
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+ T ++ Y + A+ LFD+MP RDV +W +MI G+ + +F NM G
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISAYAKCND-LKM 208
++ + TV + +A K L K VH I IG + + V N + YA C D +
Sbjct: 103 VKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDN 162
Query: 209 AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
A LVF I G + VSW ++I G T+ L +R M + + +S+C
Sbjct: 163 ARLVFEDI--GTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSAC 220
Query: 269 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
+ G+ VH+ I++GF+ ++ V+N ++ MY +C A+ LF M + ++W
Sbjct: 221 ASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWN 280
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
+I+G+ + D E+L +F M + G P+ T S+I+ C L G+
Sbjct: 281 TLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR 339
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL +N+ + NALIDMY+KCG++ D+ ++F + +VSWT+M+ G +G EA+DLF
Sbjct: 340 GLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLF 399
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
++M+ ++P+++ F+AVL AC+HAG +++G YF LMT Y V P+ + Y+C+ DLL R
Sbjct: 400 NEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSR 459
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEM 568
G++KEA + +++MP K D IW LL ACK ++ I + A ++ E++P+ A YV +
Sbjct: 460 AGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLL 519
Query: 569 ANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+N A G W A+LR +M+ + KK G+S + + + C+F V D
Sbjct: 520 SNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGD 566
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 233/476 (48%), Gaps = 16/476 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I N +A +F M ++ ++PN T + KAC L L +++HG +
Sbjct: 75 WTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAI 134
Query: 82 K-SPFWSDIFVQTTMVDMYAK-CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K S I+V ++DMYA CD +D A +F+ + ++ SW +I G+
Sbjct: 135 KIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGG 194
Query: 140 LCLFYNMRL-VGIQADFVTVMGLTQ-AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L +F M + G + F + ++ A+I + +L K VH+ I+ G ++++ V N +
Sbjct: 195 LRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLG--KQVHAAVINHGFESNLPVMNAIL 252
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y +C A+ +F + + + ++WN++I G D + +SL + M+ +GF P+
Sbjct: 253 DMYCRCRCASEAKQLFGEMTQ--KDTITWNTLIAGFETLDSY-ESLCIFSQMVSEGFSPN 309
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T S++++C L G+ +H IH G D ++ + N LI MY+KCG++ + +F
Sbjct: 310 CFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFS 369
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
GM VSWT+M+ GY G EA+ LF M +G PD + ++++S C +G ++
Sbjct: 370 GMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDE 429
Query: 378 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
G ++F + + + ++D+ S+ G + +A EL +P K S W ++ C
Sbjct: 430 GLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGAC 489
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ ++ + L+++PN+ +L + A E W F + K+ +
Sbjct: 490 KKYKQ--PSIQKLAALKVLEMKPNKAGTYVLLSNFSAA---EGNWADFASLRKLMR 540
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
AS ++ + TI WN+ I + +++++L +F +M PN TF +
Sbjct: 261 ASEAKQLFGEMTQKDTIT-WNTLI-AGFETLDSYESLCIFSQMVSEGFSPNCFTFTSVIA 318
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
ACA L+ Q +HG I+ +++ + ++DMYAKC + ++K+F M ++ S
Sbjct: 319 ACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVS 378
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLK 175
W +M++G+ G ++ + LF M GI+ D + M + A HA ++ L+
Sbjct: 379 WTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMT 438
Query: 176 SVHSFGIHIGVDADVSVC 193
S + ++ D D+ C
Sbjct: 439 SYY----NVAPDRDIYAC 452
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 15/182 (8%)
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
KD + LI Y GS +A LF +P + V++WT+MI G A ++F
Sbjct: 38 KDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTN 97
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK-------VYQVNPELNHYSCMA 503
M+ ++PN T AVL+AC L G L K +Y N ++ Y+
Sbjct: 98 MLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCC 157
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAA 563
D + + E + +A W TL+ HR G +R +E +
Sbjct: 158 DSMDNARLVFEDIG-------TKNAVSWTTLITG-YTHRRDAFGGLRVFRQMFMEEGELS 209
Query: 564 PY 565
P+
Sbjct: 210 PF 211
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 291/529 (55%), Gaps = 6/529 (1%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
+ T ++ Y + ++ A LFD+MPDRDV +W AMI G+A + + F+ M
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN-DLKM 208
G + T+ + ++ + K L+ VH + +G++ + V N ++ YA C+ ++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 209 AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
A L+FR I+ ++ V+W ++I G T+ L Y+ M+ + + + +
Sbjct: 166 ACLIFRDIK--VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 269 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
+++ G+ +H+ I GF ++ V+N+++ +Y +CG + A+ F M D+ ++W
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
+IS ++ D EAL +F E+ G VP+ T S+++ C AL G+
Sbjct: 284 TLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDL 447
G NV + NALIDMY+KCG+I D++ +F + ++ +VSWT+M+ G +G EA++L
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F +M+ +RP+R+ F+AVL AC HAG +EKG YFN+M Y +NP+ + Y+C+ DLLG
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR-NIEIGEYVAYRLFELEPHSAAPYV 566
R GK+ EA + V+ MP K D WG +L ACK H+ N I A ++ EL+P YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 567 EMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ IYA G+W A +R MM+ KK G S + + + +F V D
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 203/418 (48%), Gaps = 7/418 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N +A F M K PN T + K+C + Y ++HG +V
Sbjct: 79 WTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV 138
Query: 82 KSPFWSDIFVQTTMVDMYAKCD-RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K ++V M++MYA C ++ A +F + ++ +W +I GF +G L
Sbjct: 139 KLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ M L + + +A+ ++ K +H+ I G +++ V N+ + Y
Sbjct: 199 KMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY 258
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C L A+ F +E+ + +++WN++I D + L F R GF P+ T
Sbjct: 259 CRCGYLSEAKHYFHEMED--KDLITWNTLISELERSDSSEALLMFQR-FESQGFVPNCYT 315
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
SL+++C AL G+ +H GF+ +V + N LI MY+KCG+I ++ +F +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 321 DRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
DR VSWT+M+ GY G EA+ LF M ++G PD + ++++S C +G +E G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
K+F+ G+ + + N ++D+ + G IG+A EL +P K S W ++ C
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 152/362 (41%), Gaps = 7/362 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + L ++++M + E +A A + + IH ++
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S++ V +++D+Y +C L A F +M D+D+ +WN +I + E +L
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALL- 299
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F G + T L A + L+ + +H G + +V + N I YA
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYA 359
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ ++ VF I + R +VSW S++ G +++ + M+ G RPD
Sbjct: 360 KCGNIPDSQRVFGEIVD-RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVF 418
Query: 262 VSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++LS+C + +G + + YG + D + N ++ + + G I A L + M
Sbjct: 419 MAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ S I G + + + A + P +V M+S + GKW
Sbjct: 479 FKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAE----GKW 534
Query: 381 FD 382
D
Sbjct: 535 VD 536
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
K +++ N ++ + K G + +AR LF +P++ VV+WT MI G A + A + FH+
Sbjct: 43 KHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMAD 504
M++ PN T +VL++C + L G ++ K +Y N +N Y+ +
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
++ A + + +K+D W TL+ H IG Y+ LE P
Sbjct: 162 ------TMEAACLIFRDIKVKNDV-TWTTLITGF-THLGDGIGGLKMYKQMLLENAEVTP 213
Query: 565 Y 565
Y
Sbjct: 214 Y 214
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 307/577 (53%), Gaps = 36/577 (6%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDM---YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++IH ++K+ + + + ++++ D L A +F+ + + ++ WN M G
Sbjct: 50 RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A L L+ M +G+ + T L ++ +K + +H + +G D D+
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169
Query: 191 SVCNTWISAYAKCNDLKMAELVF--------------------RGIEEG---------LR 221
V + IS Y + L+ A VF RG E ++
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSWN++I G + ++L ++ M+ RPD +T+V+++S+C ++ GR VH
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S +GF ++ ++N+L+ +YSKCG++++A LF+G+ + +SW +I GY
Sbjct: 290 SWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYK 349
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN--- 398
EAL LF M +GE P+ VT+LS++ C GA+++G+W Y LK +
Sbjct: 350 EALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKRLKSATNASSLRT 408
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LIDMY+KCG I A ++F ++ K++ SW MI G A++G A D+F +M ++ + P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEP 468
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ +TF+ +L AC+ +G L+ G F MT+ Y++ P+L HY CM DLLG G KEA +
Sbjct: 469 DDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 528
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+ +M ++ D IW +LL ACKI N+E+GE A L ++EP + YV ++NIYA GRW
Sbjct: 529 INNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRW 588
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ VA +R ++ +KK PG S + I+ F + D
Sbjct: 589 NEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/531 (28%), Positives = 257/531 (48%), Gaps = 80/531 (15%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R ++ AL L+ M + PN+ TFPF+ K+CAK F Q IHGH++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 161
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRL-------------------------------DCAYK 110
K + D+FV T+++ +Y + RL + A K
Sbjct: 162 KLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQK 221
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD++P +DV SWNAMI G+A+ G ++ L LF M I+ D T++ + A +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGS 281
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G +++ + N+ + Y+KC +L+ A +F G+ + V+SWN++I
Sbjct: 282 IELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLL--YKDVISWNTLI 339
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH-GIHYGF 289
GG T+ + + ++L ++ M+ G RP+ T++S+L +C A+ GR +H +
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKS 399
Query: 290 DLDVSVINT-LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
+ S + T LI MY+KCGDI++A +F+ + ++ SW AMI G+A G D A +F
Sbjct: 400 ATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFS 459
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M G PD +T + ++S C +SG L+LG
Sbjct: 460 RMRKIGIEPDDITFVGLLSACSRSGMLDLG------------------------------ 489
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALN-----GEFVEALDLFHQMMELDLRPNRVTF 463
R +F + + ++ GC ++ G F EA ++ + M ++ P+ V +
Sbjct: 490 -----RHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNM---EMEPDGVIW 541
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++L+AC G +E G + + K+ NP Y ++++ G+ E
Sbjct: 542 CSLLKACKIRGNVELGESFAQNLIKIEPENPGC--YVLLSNIYATAGRWNE 590
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 140/319 (43%), Gaps = 41/319 (12%)
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
YD R + +SLL +C ++L RL+H+ I G ++ L+ + D
Sbjct: 28 YDSLRNHPS--LSLLHNCKTLQSL---RLIHAQMIKTGLHNTNYALSKLLELCVISPHFD 82
Query: 311 SARF---LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+ +F+ + + + W M G+A D AL+L+ M + G +P+ T ++
Sbjct: 83 GLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLK 142
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV- 426
C +S A + G+ + G ++ V +LI +Y + G + DAR++F P + VV
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVS 202
Query: 427 ------------------------------SWTTMIAGCALNGEFVEALDLFHQMMELDL 456
SW MI+G A G + EAL+LF +MM+ ++
Sbjct: 203 YTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNI 262
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
RP+ T + V+ AC +G +E G + + + L + + DL + G+L+ A
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHSWIDD-HGFGSNLKIVNSLMDLYSKCGELETAC 321
Query: 517 DFVQSMPIKSDAGIWGTLL 535
+ + K D W TL+
Sbjct: 322 GLFEGLLYK-DVISWNTLI 339
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 255/444 (57%), Gaps = 4/444 (0%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWI--SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ +H+F I GV ++ + + C+ + A +F I+ + +WN++I
Sbjct: 56 FRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNP--NIFTWNTMIR 113
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + +L YR M PD T LL + + +G VHS I GF+
Sbjct: 114 GYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES 173
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
V V NTL+ MY+ CG +SA LF+ M +R V+W ++I+GYA G +EAL LF M
Sbjct: 174 LVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG 233
Query: 352 AAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
G PD T++S++S C + GAL LG+ Y GL N+ NAL+D+Y+KCGSI
Sbjct: 234 LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIR 293
Query: 412 DARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
A ++F + EK+VVSWT++I G A+NG EAL+LF ++ L P+ +TF+ VL AC+
Sbjct: 294 QAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
H G +++G+ YF M + Y + P++ HY CM DLLGR G +K+A +F+Q+MP++ +A +W
Sbjct: 354 HCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVW 413
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
TLL AC IH ++ +GE +L +LEP + YV ++N+YA RW V +R M R
Sbjct: 414 RTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLRE 473
Query: 592 QVKKFPGQSLVHINGKTCTFTVED 615
VKK PG SLV + + F + D
Sbjct: 474 GVKKTPGHSLVELRNRLHEFVMGD 497
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 196/407 (48%), Gaps = 13/407 (3%)
Query: 59 FIAKACAKL------SDFLYSQMIHGHIVKS--PFWSDIFVQTTMVDMYAKCDRLDCAYK 110
+I K C L S F + Q IH ++ P + + + + + C + A++
Sbjct: 37 YILKKCIALLLSCASSKFKFRQ-IHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQ 95
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+F ++ + ++ +WN MI G+A+ L L+ M + I+ D T L +A
Sbjct: 96 IFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMD 155
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ + VHS I G ++ V V NT + YA C + A +F + E R +V+WNS+I
Sbjct: 156 VREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAE--RNLVTWNSVI 213
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + +++L +R M G PD T+VSLLS+C AL GR H + + G D
Sbjct: 214 NGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLD 273
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
++ N L+ +Y+KCG I A +FD M +++ VSWT++I G A G EAL LF +
Sbjct: 274 GNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKEL 333
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
E G +P +T + ++ C G ++ G +F G+ + ++D+ + G
Sbjct: 334 ERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGL 393
Query: 410 IGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ A E +P + V W T++ C ++G Q+++L+
Sbjct: 394 VKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLE 440
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 12/289 (4%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
++ I WN+ IR + AL L+R+M + IEP+ T+PF+ KA AKL D +
Sbjct: 101 QNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGE 160
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +++ F S +FVQ T+V MYA C + A+KLF+ M +R++ +WN++I G+A G
Sbjct: 161 KVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNG 220
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L LF M L G++ D T++ L A L+L + H + + +G+D ++ N
Sbjct: 221 RPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGN 280
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ YAKC ++ A VF +EE ++VVSW S+I G ++L ++ + G
Sbjct: 281 ALLDLYAKCGSIRQAHKVFDEMEE--KSVVSWTSLIVGLAVNGFGKEALELFKELERKGL 338
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGI-----HYGFDLDV 293
P T V +L +C + +G R+ +GI HYG +D+
Sbjct: 339 MPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDL 387
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+L ++ + WNS I ++AL LFR M +EP+ T + ACA+L
Sbjct: 196 KLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELG 255
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ H ++VK ++ ++D+YAKC + A+K+FD+M ++ V SW ++IV
Sbjct: 256 ALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIV 315
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
G A GF ++ L LF + G+ +T +G+ A H
Sbjct: 316 GLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSH 354
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 293/546 (53%), Gaps = 35/546 (6%)
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D L A +F+ + + + WN MI G A L L+ M +G+ + T L
Sbjct: 12 DGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLL 71
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS------------------------ 198
++ +K + + +H + +G D D+ V + IS
Sbjct: 72 KSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVV 131
Query: 199 -------AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
YA D++ A+ +F I ++ VVSWN++I G + ++L + M+
Sbjct: 132 SYTALITGYASRGDIRSAQKLFDEIP--VKDVVSWNAMISGYAETGCYKEALELFEEMMK 189
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
RPD +T V++LS+C ++ GR VHS +GFD ++ ++N LI +YSKCG++++
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A LF G+ + +SW +I GY EAL LF M +GE P+ VT+LS++ C
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309
Query: 372 SGALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
GA+++G+W Y G+ + + +LIDMY+KCG I A ++F ++ K++ SW
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 369
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MI G A++G + DLF +M ++ + P+ +TF+ +L AC+H+G L+ G F MT+
Sbjct: 370 AMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQD 429
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Y++ P+L HY CM DLLG G KEA + + +M ++ D IW +LL ACK+H N+E+ E
Sbjct: 430 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAES 489
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A L ++EP + + Y+ ++NIYA GRW+ VA +R ++ +KK PG S + ++
Sbjct: 490 FAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVF 549
Query: 610 TFTVED 615
F V D
Sbjct: 550 EFVVGD 555
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 239/464 (51%), Gaps = 38/464 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR ++ +L L+ M + PN+ TFPF+ K+CAK F Q IHG ++
Sbjct: 32 WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVL 91
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAY-------------------------------K 110
K F D++V T+++ MY + RL+ AY K
Sbjct: 92 KLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQK 151
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD++P +DV SWNAMI G+A+ G ++ L LF M + ++ D T + + A H+
Sbjct: 152 LFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGS 211
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G D+++ + N I Y+KC +++ A +F+G+ + V+SWN++I
Sbjct: 212 IELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGL--SYKDVISWNTLI 269
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 270 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKG 329
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S+ +LI MY+KCGDI++A +F+ M ++ SW AMI G+A G D + LF
Sbjct: 330 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFS 389
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 390 RMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHS 449
Query: 408 GSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
G +A E+ + E V W +++ C ++G VE + F Q
Sbjct: 450 GLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN-VELAESFAQ 492
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 192/599 (32%), Positives = 315/599 (52%), Gaps = 46/599 (7%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F + + C+ ++ +H IV S D F+ + ++ Y+K + L A+K+FDK+
Sbjct: 37 FGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKIL 96
Query: 117 DRDVASWNAMIVGFAQMGF---LEKVLCLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLS 172
D+++ SWNAM++G++ +L + ++ D T+ + +A ++
Sbjct: 97 DKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSI 156
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L K V F + G D+D+ V N I+ Y++C++ +A ++F + + R +VSWNS+I G
Sbjct: 157 LAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHD--RDIVSWNSMIAG 214
Query: 233 CTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
+ G ++D YR M+ G RP+ TVVS+L +C LV G VH I ++
Sbjct: 215 YSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEM 274
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
DVS N+LI +Y+KCG +D AR LF+ M ++ V++ +++SGY G +D+A+ LF M+
Sbjct: 275 DVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMK 334
Query: 352 AAGEVPDLVTVLSMISGCGQS----GALEL------------------------------ 377
P L T ++ISG Q+ G LEL
Sbjct: 335 N----PRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLK 390
Query: 378 -GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK YA G N+ V ++ID Y+K G + A+ +F +++++ WT +I+ +
Sbjct: 391 GGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYS 450
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G+ AL LF M+ +P+ VTF AVL AC H+G + + W F+ M Y P +
Sbjct: 451 AHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCV 510
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY+CM +L R G L EA +F+ MPI+ +A +WG LL + ++E+G++V LF
Sbjct: 511 EHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFN 570
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+EP + YV MAN+Y+ GRW+ N+R MK+ +KK PG S + +G +F D
Sbjct: 571 MEPENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIETSGGLRSFIARD 629
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 209/423 (49%), Gaps = 33/423 (7%)
Query: 51 EPNNLTFPFIAKACAKL-SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+P+N T + KA + L D + ++ + +++ F SDIFV ++ Y++CD A
Sbjct: 135 KPDNFTITCVLKALSVLFPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIAR 194
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHA 168
LFD+M DRD+ SWN+MI G++Q GF E L+ M G++ + VTV+ + QA
Sbjct: 195 ILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQT 254
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA-----------ELVFRGIE 217
L VH F I V+ DVS N+ I YAKC L A E+ + I
Sbjct: 255 NDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIV 314
Query: 218 EGLRT------------------VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
G T + +WN++I G + + L + M GFRP+
Sbjct: 315 SGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAV 374
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ S+L + C L G+ +H++ I G+ ++ V ++I Y+K G + A+++FD
Sbjct: 375 TLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQS 434
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-ELG 378
DR+ + WTA+IS Y+ GD + ALRLF M + G PD VT ++++ C SG + E
Sbjct: 435 KDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAW 494
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
K FD G + V ++ + S+ G + +A E +P E W ++ G ++
Sbjct: 495 KIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSV 554
Query: 438 NGE 440
+G+
Sbjct: 555 SGD 557
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 163/357 (45%), Gaps = 36/357 (10%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WNS I L+R+M + PN +T + +ACA+ +D ++ +H
Sbjct: 205 IVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVH 264
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I++ D+ +++ +YAKC LD A +LF++M ++D ++ +++ G+ GF++
Sbjct: 265 QFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVD 324
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL----------------------- 174
K + LF M+ + + GL Q + L L+
Sbjct: 325 KAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFS 384
Query: 175 --------KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
K++H++ I G ++ V + I AYAK L+ A+ VF ++ R+++ W
Sbjct: 385 CFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKD--RSLIVW 442
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGI 285
+II + + +L + M+ +G +PD T ++L++C + + ++ +
Sbjct: 443 TAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFL 502
Query: 286 HYGFDLDVSVINTLISMYSKCGDI-DSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
YGF V ++ + S+ G + ++A F+ + W A+++G + GD++
Sbjct: 503 KYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVE 559
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
++ ++ WN+ I V N L L + M++ PN +T I + S+ +
Sbjct: 334 KNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGK 393
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH + +++ + +I+V T+++D YAK L A +FD+ DR + W A+I ++ G
Sbjct: 394 AIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHG 453
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
L LF +M G Q D VT + A H+
Sbjct: 454 DANAALRLFGDMLSNGTQPDPVTFTAVLAACAHS 487
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 315/618 (50%), Gaps = 28/618 (4%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP----------- 52
SS P L K+ S + N S+ + + +E H + F +N P
Sbjct: 5 SSASP-LRKLKVSKSANHLLSRALTSHNHHEEHSSSRTFNS-NQNTSSPVDSDLIAEFTR 62
Query: 53 -NNLTFPF----IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDC 107
+L+ P+ I CAK F H I+K F S++++ + +VDMYAKC +
Sbjct: 63 HGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISS 122
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A LFD+MP R V +WN++I G+ + + + LF M I +V
Sbjct: 123 ARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQ 182
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + VH + G+ +V V + + Y+KC D+ + LVF + R V++W
Sbjct: 183 LEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVN--RNVITWT 240
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
S++ G + +K D+++ + M+ RP+ T SLLSS P+ L VH I
Sbjct: 241 SMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQL 300
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT----RVSWTAMISGYAQKGDLDEA 343
G + +V + TL+++YSKC S+ F +C ++W A+I+GY++ G +EA
Sbjct: 301 GLESNVYIAATLVTVYSKCS---SSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEA 357
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
LR F M+ AG D T+ S++ G S LE GK G ++ V N L+ M
Sbjct: 358 LRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVSM 417
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y++CG+IGD++ +F+ + E V+SW ++ A +G EA++LF QM + +++PN TF
Sbjct: 418 YARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTF 477
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNP-ELNHYSCMADLLGRKGKLKEALDFVQSM 522
LAVL AC+H GF++KG YF+ M + P ++ HY+ + D GR G L EA F+ SM
Sbjct: 478 LAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSM 537
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
PI ++ LL A +H N EI A +L EL P+ A YV ++++ + G WD A
Sbjct: 538 PIVPAPSVYKALLSASLVHGNREIAARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAA 597
Query: 583 NLRTMMKRNQVKKFPGQS 600
+LR +M ++K PG S
Sbjct: 598 DLRKLMCDRGLRKKPGYS 615
>gi|297823227|ref|XP_002879496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325335|gb|EFH55755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 617
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 198/588 (33%), Positives = 305/588 (51%), Gaps = 28/588 (4%)
Query: 38 ALLLFRRMKKNDIEPNNLT----------FPFIAKACAKLSDF--LYSQMIHGHIVKSPF 85
A ++R+ + + +P L F F+ K C ++ + +QM+ H V+ P
Sbjct: 8 AFSIYRQFQFSQFKPRQLEEARRGDLERGFLFLLKKCISVNQLREIQAQMLL-HSVEKPN 66
Query: 86 WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM-GFLEKVLCLFY 144
+ ++ + + A L + + S+N MI G + E L L+
Sbjct: 67 F--------LIPKAVELGDFNYASFLLSVTEEPNHYSFNYMIRGLTNIWNDHEGALSLYR 118
Query: 145 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN 204
M+ G++ D T + A + + + +SVHS +G++ D + ++ I YAKC
Sbjct: 119 RMKYSGLKPDNFTYNFVFIACGKREEIGVGRSVHSSLFKVGLERDDHISHSLIMMYAKCG 178
Query: 205 DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSL 264
+ A VF I + R VSWNS+I G + + D+++ +R M +GF PD T+VS+
Sbjct: 179 LVGYARKVFDEITD--RVTVSWNSMISGYSEAGRAKDAMDLFRKMEEEGFEPDERTLVSM 236
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
L +C L GRL+ I L + + LI+MY KCGD+DSAR +F+ M + R
Sbjct: 237 LGACAHLGDLTTGRLLEKMAITKKIGLSTFLGSKLITMYGKCGDLDSARRVFNQMIKKDR 296
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
V+W AMI+ Y+Q G EA +LFF ME G PD T+ +++S CG GALELGK + +
Sbjct: 297 VAWNAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKRIETH 356
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A L+ N+ V L+DMY KCG I +A +F A+P K +W MI A G EA
Sbjct: 357 ASEISLQHNIYVATGLVDMYGKCGHIEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEA 416
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L LF QM + P+ VTF+ VL AC HAG +++G YF+ M+ ++ + P++ HY+ + D
Sbjct: 417 LLLFDQM---PVPPSDVTFIGVLSACVHAGLVDQGCRYFHEMSSLFGLVPKIEHYTNIID 473
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL-EPHSAA 563
LL R G L EA +F++ P K D + +L AC +++ I E L E+ E +A
Sbjct: 474 LLSRAGLLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAG 533
Query: 564 PYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
YV + + A WD A +R +M+ V K PG S + ING+ F
Sbjct: 534 NYVISSKVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEINGELMEF 581
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 193/392 (49%), Gaps = 6/392 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N+ AL L+RRMK + ++P+N T+ F+ AC K + + +H + K D +
Sbjct: 108 NDHEGALSLYRRMKYSGLKPDNFTYNFVFIACGKREEIGVGRSVHSSLFKVGLERDDHIS 167
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MYAKC + A K+FD++ DR SWN+MI G+++ G + + LF M G +
Sbjct: 168 HSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYSEAGRAKDAMDLFRKMEEEGFE 227
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T++ + A H L+ + + I + + + I+ Y KC DL A V
Sbjct: 228 PDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLSTFLGSKLITMYGKCGDLDSARRV 287
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + R V+WN++I + K ++ + M G PD T+ ++LS+C
Sbjct: 288 FNQMIKKDR--VAWNAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 345
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ + +H ++ V L+ MY KCG I+ A +F+ M + +W AMI+
Sbjct: 346 ALELGKRIETHASEISLQHNIYVATGLVDMYGKCGHIEEALRVFEAMPVKNEATWNAMIT 405
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLK 391
YA +G EAL LF M P VT + ++S C +G ++ G ++F + GL
Sbjct: 406 AYAHQGHAKEALLLFDQMPVP---PSDVTFIGVLSACVHAGLVDQGCRYFHEMSSLFGLV 462
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ +ID+ S+ G + +A E P K
Sbjct: 463 PKIEHYTNIIDLLSRAGLLDEAWEFMERFPGK 494
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 155/346 (44%), Gaps = 14/346 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I + A A+ LFR+M++ EP+ T + ACA L D +++ +
Sbjct: 198 WNSMISGYSEAGRAKDAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAI 257
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F+ + ++ MY KC LD A ++F++M +D +WNAMI ++Q G +
Sbjct: 258 TKKIGLSTFLGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFK 317
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ M G+ D T+ + A L L K + + I + ++ V + Y
Sbjct: 318 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKRIETHASEISLQHNIYVATGLVDMYG 377
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A VF + ++ +WN++I + ++L + M P T
Sbjct: 378 KCGHIEEALRVFEAMP--VKNEATWNAMITAYAHQGHAKEALLLFDQMPVP---PSDVTF 432
Query: 262 VSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFL--FD 317
+ +LS+CV + QG R H +G + +I + S+ G +D A F+ F
Sbjct: 433 IGVLSACVHAGLVDQGCRYFHEMSSLFGLVPKIEHYTNIIDLLSRAGLLDEAWEFMERFP 492
Query: 318 GMCDRTRVSWTAMISGYAQKGDL---DEALRLFFAMEAAGEVPDLV 360
G D + A++ ++ D+ ++A+R+ M+ A + V
Sbjct: 493 GKPD--EIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 536
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 285/548 (52%), Gaps = 30/548 (5%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
+Y+ + L + +LF+ + +W ++I + G + L F M G+ D
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKM-------AE 210
+ ++ L+L +S+H + I +G+D D+ N ++ Y+K L+ A
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 211 LVFRGIEEGLRTV-----------------------VSWNSIIGGCTYGDKFDDSLNFYR 247
VF + E R+V VSWN+II G ++++L R
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M +PD T+ S+L + +G+ +H I G D D+ V ++LI MY+KC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+ + +F + +R +SW ++I+G Q G DE LR F M A P + S++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C L LGK Y G +N+ + ++L+DMY+KCG+I A+++F + + +VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT MI GCAL+G+ +A++LF QM ++PN V F+AVL AC+H G +++ W YFN MT
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ + + P + HY+ ++DLLGR G+L+EA DF+ M I IW TLL AC++H NI++
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMA 528
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E VA R+ E++P++ Y+ +ANIY+ RW A R M+R ++K P S + + K
Sbjct: 529 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 588
Query: 608 TCTFTVED 615
F D
Sbjct: 589 VYAFMAGD 596
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 230/474 (48%), Gaps = 42/474 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S IR H++L F M + + P++ FP + K+CA L D + +HG+I+
Sbjct: 74 WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYII 133
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRL--------------------------------DCAY 109
+ D++ +++MY+K L D
Sbjct: 134 RVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVR 193
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
K+F+ MP++D+ SWN +I G A+ G E+ L + M ++ D T+ +
Sbjct: 194 KIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENV 253
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+S K +H I G+DAD+ V ++ I YAKC + + VF + E R +SWNSI
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTE--RDGISWNSI 311
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I GC FD+ L F+R M+ +P + S++ +C L G+ +H + GF
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D ++ + ++L+ MY+KCG+I +A+ +FD M R VSWTAMI G A G +A+ LF
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
ME G P+ V +++++ C G + E K+F++ G+ V A+ D+ + G
Sbjct: 432 METEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAG 491
Query: 409 SIGDARELFYAL---PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
+ +A + + P ++ W T+++ C ++ A + ++++E+D PN
Sbjct: 492 RLEEAYDFICGMHIGPTGSI--WATLLSACRVHXNIDMAEKVANRILEVD--PN 541
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 185/594 (31%), Positives = 308/594 (51%), Gaps = 4/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + A M ++ + N + I AC D + +HG ++
Sbjct: 188 WNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVL 247
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S + + +VDMY K L+ + +F+ M +++ SWN+ I FA GF E VL
Sbjct: 248 KFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLE 307
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M + VT+ L A + + L K +H + I V++D+ + NT + YA
Sbjct: 308 MFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYA 367
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K + A +F IE +R VVSWN++I T ++ M +G P+ T+
Sbjct: 368 KFGCSEKASAIFENIE--VRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTL 425
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V+LL +C ++ G+ +H+ I D+ V N LI +Y+KCG ++ AR++FD +
Sbjct: 426 VNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFD-RSE 484
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VS+ +I GY+Q E+L LF M AG D V+ + +S C A + GK
Sbjct: 485 KDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEI 544
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L + + N+L+D+Y+K G + A ++F + +K V SW TMI G ++G+
Sbjct: 545 HGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQI 604
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A +LF M + + + V+++AVL C+H G +++G YF+ M + P+ HY+C
Sbjct: 605 DVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMI-AQNIKPQQMHYAC 663
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G+L E+ + +++MP ++++ +WG LL +C+IH +IE+ A LFEL+P +
Sbjct: 664 MVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEN 723
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y + N+Y+ G W+ ++ +MK +V+K P S V K F V D
Sbjct: 724 SGYYTLLRNMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 777
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/566 (28%), Positives = 273/566 (48%), Gaps = 15/566 (2%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY- 72
+R + WNS R +AL ++ RM ++ + P++ TFPF A A ++ +
Sbjct: 75 FRLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHP 134
Query: 73 ---SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+++ + + +D+F T+V YA C R A ++FD+MP RDV SWN+++
Sbjct: 135 AKGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSA 194
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
G LE M G+ + +++ + A + VH + G+++
Sbjct: 195 LLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSV 254
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V++ N + Y K DL+ + VF G++E + VSWNS IG + +D L +R M
Sbjct: 255 VNLGNALVDMYGKFGDLESSMHVFNGMQE--KNEVSWNSAIGCFAHAGFHEDVLEMFRLM 312
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
P T+ SLL + V G+ +H + I + D+ + NTL+ MY+K G
Sbjct: 313 SEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCS 372
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ A +F+ + R VSW AMI+ Q G EA RL M+ GE P+ T+++++ C
Sbjct: 373 EKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPAC 432
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ ++++GK ++ L ++ V NALID+Y+KCG + AR +F EK VS+
Sbjct: 433 SRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIF-DRSEKDGVSYN 491
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK- 488
T+I G + + E+L LF QM + + V+F+ L AC++ ++G ++ K
Sbjct: 492 TLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKR 551
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ +P L + + D+ + G L A + K D W T++ +H I+
Sbjct: 552 LLDSHPFL--ANSLLDVYTKGGMLDTASKIFNRITQK-DVASWNTMILGYGMHGQID--- 605
Query: 549 YVAYRLFELEPHSAAPYVEMANIYAL 574
VA+ LF+L Y ++ I L
Sbjct: 606 -VAFELFDLMKDDGIEYDHVSYIAVL 630
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 5/312 (1%)
Query: 173 LLKSVHSFGIHIG-VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
LL+ H+ + G + A + + +YA D+ A L+ R LR+ WNS+
Sbjct: 29 LLRRAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSR 88
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTT---VVSLLSSCVCPEALVQGRLVHSHGIHYG 288
++L Y M+ G RPD T + ++ E +G +H+ + G
Sbjct: 89 ALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRG 148
Query: 289 FDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
L DV NTL++ Y+ CG AR +FD M R VSW +++S G L++A R
Sbjct: 149 LLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAV 208
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M +G ++ +++S++ CG G GL V + NAL+DMY K
Sbjct: 209 VGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKF 268
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + + +F + EK VSW + I A G + L++F M E D+ P VT ++L
Sbjct: 269 GDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLL 328
Query: 468 QACTHAGFLEKG 479
A G+ G
Sbjct: 329 PALVDLGYFHLG 340
>gi|218546775|sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
Length = 736
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 310/589 (52%), Gaps = 15/589 (2%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + +D + L F +++ EPN T + AC L + + IHG++
Sbjct: 115 SWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYV 172
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++S F VQ +++ MYA D L A KLFD+M +RDV SW+ +I + Q L
Sbjct: 173 IRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGL 231
Query: 141 CLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 198
LF M + D VTV + +A + + + +SVH F I G D ADV VCN+ I
Sbjct: 232 KLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLID 291
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K D+ A VF E R +VSWNSI+ G + ++D++L + M+ + D
Sbjct: 292 MYSKGFDVDSAFRVFD--ETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDE 349
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TVVSLL C E + + +H I G++ + +++LI Y+ C +D A + D
Sbjct: 350 VTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDS 409
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + VS + MISG A G DEA+ +F M + P+ +TV+S+++ C S L
Sbjct: 410 MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTS 466
Query: 379 KWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
KW A L N + V +++D Y+KCG+I AR F + EK ++SWT +I+ A+
Sbjct: 467 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 526
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG +AL LF +M + PN VT+LA L AC H G ++KG F M + P L
Sbjct: 527 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQ 585
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIH-RNIEIGEYVAYRL 554
HYSC+ D+L R G++ A++ ++++P +K+ A WG +L C+ + + I V +
Sbjct: 586 HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEV 645
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
ELEP ++ Y+ ++ +A W+ VA +R ++K +V+ G S+V
Sbjct: 646 LELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVR 694
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 235/484 (48%), Gaps = 18/484 (3%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNN-LTFPFIAKACAKLSDFLYSQM 75
S + +S+I++A + + + + +++ ++ N+ FP + KACAKLS +
Sbjct: 9 SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRC 68
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
I ++K F S + V ++ D Y KC L + FD M RD SWN ++ G GF
Sbjct: 69 IQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGF 128
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL---KSVHSFGIHIGVDADVSV 192
E+ L F +R+ G + + T++ IHA SL + +H + I G SV
Sbjct: 129 EEEGLWWFSKLRVWGFEPNTSTLV----LVIHACR-SLWFDGEKIHGYVIRSGFCGISSV 183
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ + YA + L +L F + E R V+SW+ +I + L ++ M+++
Sbjct: 184 QNSILCMYADSDSLSARKL-FDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHE 240
Query: 253 G-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDID 310
PD TV S+L +C E + GR VH I GFDL DV V N+LI MYSK D+D
Sbjct: 241 AKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVD 300
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA +FD R VSW ++++G+ DEAL +F M D VTV+S++ C
Sbjct: 301 SAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCK 360
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
K G + N + ++LID Y+ C + DA + ++ K VVS +T
Sbjct: 361 FFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCST 420
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-HAGFLEKGWGYFNLMTKV 489
MI+G A G EA+ +F M + PN +T +++L AC+ A W + + +
Sbjct: 421 MISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRS 477
Query: 490 YQVN 493
+N
Sbjct: 478 LAIN 481
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 290/540 (53%), Gaps = 3/540 (0%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +VK SD FV T+++DMYAKC +D A +++DKM D A+ N +I +A+ GF
Sbjct: 136 HCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFF 195
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ +F + +G + + T + + K +H+ + + ++ +V N
Sbjct: 196 VQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNAL 255
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++ Y+KC ++ AE+VF + + R ++SW + I G F +L + M G P
Sbjct: 256 LTLYSKCGMMEEAEIVFESLRQ--RNIISWTASINGFYQHGDFKKALKQFSMMRESGIEP 313
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T +L+SC C + + GR+ H+ I G V V +I MYS G++D A F
Sbjct: 314 NEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQF 373
Query: 317 DGMCDR-TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
M + VSW A+I+GY +++A+ F M + T ++ C +L
Sbjct: 374 KQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSL 433
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+ ++ N+ V ++LI+ Y++CGS+ +A ++F + + VVSW ++I
Sbjct: 434 ATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAY 493
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ NG+ +A+ L +M+E +P TFL VL AC+H+G +++G +F M + Y + PE
Sbjct: 494 SQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPE 553
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
H SCM D+LGR G+L+ ALDF++ + +K A IW LL AC+ + N+++ EYVA ++
Sbjct: 554 ETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKIL 613
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+LEP+ A YV ++N+YA GRW N R +M++ ++ K PG S + +N K F D
Sbjct: 614 DLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHD 673
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 275/534 (51%), Gaps = 41/534 (7%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H H+V + ++ Y +C +L A KLFDK+P+ ++ W + A+
Sbjct: 823 RALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARR 882
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
GF E+ L F M+ G++ + + + +A H +++H+ + ++D +
Sbjct: 883 GFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 942
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ I Y+KC ++ A VF I + + +V N+++ G ++LB + M G
Sbjct: 943 SALIYMYSKCGHVEKACRVFDWIVD--KDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAG 1000
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+P+V + NTLI+ +S+ GD
Sbjct: 1001 VKPNVVS-----------------------------------WNTLIAGFSQVGDKSMVS 1025
Query: 314 FLFDGMC----DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+F M + VSWT++ISG+ Q E F M G P VT+ S++ C
Sbjct: 1026 EVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPAC 1085
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
L GK YA G++ +V V +AL+DMY+KCG I +A+ LFY +PE+ V+W
Sbjct: 1086 TNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWN 1145
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
++I G A +G EA++LF+QM E D + + +TF AVL AC+HAG +E G F M +
Sbjct: 1146 SLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEK 1205
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Y++ P L HY+CM DLLGR GKL EA D +++MP++ D +WG LL AC+ H NIE+ E
Sbjct: 1206 YRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEV 1265
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
A LFELEP S + ++N+YA GRW A ++ MMK+ + KFPG S +
Sbjct: 1266 AAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 204/427 (47%), Gaps = 45/427 (10%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+AL F M+K + PN P I KAC LSD + +H I+K+ F SD ++ + +
Sbjct: 886 EEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISAL 945
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+ MY+KC ++ A ++FD + D+D+ NAM+ G+AQ GF+ + L L M+ G++ +
Sbjct: 946 IYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNV 1005
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR- 214
V+ NT I+ +++ D M VFR
Sbjct: 1006 VS-----------------------------------WNTLIAGFSQVGDKSMVSEVFRL 1030
Query: 215 ----GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
G+E VVSW S+I G + + ++ M+ GF P T+ SLL +C
Sbjct: 1031 MTANGVEP---DVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTN 1087
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
L G+ +H + + G + DV V + L+ MY+KCG I A+ LF M +R V+W ++
Sbjct: 1088 VANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSL 1147
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG 389
I GYA G +EA+ LF ME + D +T ++++ C +G +ELG+ F
Sbjct: 1148 IFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYR 1207
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLF 448
++ + ++D+ + G + +A +L A+P E W ++ C +G A
Sbjct: 1208 IEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAA 1267
Query: 449 HQMMELD 455
+ EL+
Sbjct: 1268 EHLFELE 1274
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 202/433 (46%), Gaps = 5/433 (1%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A +F ++ PN+ T+ + C +S + +H H+VK + S+ V ++
Sbjct: 197 QAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALL 256
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+Y+KC ++ A +F+ + R++ SW A I GF Q G +K L F MR GI+ +
Sbjct: 257 TLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEF 316
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + + K + H+ I G+ + V V I Y+ ++ AE F+ +
Sbjct: 317 TFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQM 376
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
VSWN++I G +K + ++ + M+ + + T ++ +C +L
Sbjct: 377 GRAASN-VSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLAT 435
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
+HS I + ++ V ++LI Y++CG +++A +F + D VSW ++I Y+Q
Sbjct: 436 TVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQ 495
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVM 395
GD +A+ L M G P T L+++S C SG ++ G+ +F + ++
Sbjct: 496 NGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEET 555
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMEL 454
C+ ++D+ + G + +A + L K S W ++A C N A + ++ L
Sbjct: 556 HCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKI--L 613
Query: 455 DLRPNRVTFLAVL 467
DL PN T L
Sbjct: 614 DLEPNDATVYVTL 626
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 166/371 (44%), Gaps = 11/371 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R I W + I + KAL F M+++ IEPN TF + +C + DF+ +
Sbjct: 276 RQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGR 335
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQM 133
M H ++K S +FV T ++DMY+ +D A K F +M SWNA+I G+
Sbjct: 336 MFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLN 395
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+EK + F M + + T + +A L+ +HS I V++++ V
Sbjct: 396 EKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVA 455
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ I AY +C L+ A VF I + VVSWNSII + ++ R MI +G
Sbjct: 456 SSLIEAYTQCGSLENAVQVFTQISDA--DVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEG 513
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSA 312
+P T +++LS+C + +G+ + Y + + + ++ + + G +++A
Sbjct: 514 NKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENA 573
Query: 313 RFLFDGMCDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ + S W +++ +L A + A + P+ TV +S
Sbjct: 574 LDFIKKLTMKPTASIWRPLLAACRYNSNLQMA--EYVAEKILDLEPNDATVYVTLSNM-- 629
Query: 372 SGALELGKWFD 382
E+G+W D
Sbjct: 630 --YAEVGRWAD 638
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 112/223 (50%)
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
H+ + G P V S LS C + GR H + G D V +LI MY+KCG
Sbjct: 103 HVEFGGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCG 162
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++DSA ++D M + +IS YA+ G +A ++F + G P+ T +M++
Sbjct: 163 EVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLA 222
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
CG A++ GK + V NAL+ +YSKCG + +A +F +L ++ ++S
Sbjct: 223 VCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIIS 282
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
WT I G +G+F +AL F M E + PN TF VL +C
Sbjct: 283 WTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC 325
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL +GR +H+H + G L+S Y++CG + +AR LFD + + W +
Sbjct: 818 ALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTG 877
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
A++G +EAL F M+ G P+ + S++ CG G+ +
Sbjct: 878 ACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFES 937
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
+ + +ALI MYSKCG + A +F + +K +V M++G A +G EALBL +M
Sbjct: 938 DAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQ 997
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
+ ++PN V++ ++ + G F LMT
Sbjct: 998 QAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMT 1032
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 308 DIDSARFLFDGMCDRTRVSWT-AMISGYAQKGDLDEALRL--FFA------MEAAGEVPD 358
D+++A LF+ R VS T + SG D +E ++ FF +E G P
Sbjct: 55 DLNNACILFEKTPKRIGVSITESHRSGCTD--DPEEGVKEAGFFTRNETPHVEFGGGFPH 112
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
V S +S CG+ G +ELG+ + + GL + VC +LIDMY+KCG + A ++
Sbjct: 113 RQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYD 172
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ + +I+ A NG FV+A +F Q+ + RPN T+ +L C +++
Sbjct: 173 KMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQE 232
Query: 479 G 479
G
Sbjct: 233 G 233
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 196/584 (33%), Positives = 294/584 (50%), Gaps = 86/584 (14%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W IR + + +A L+ +M++ + P KACA+++ + IHG +
Sbjct: 73 WACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIHGQVQ 132
Query: 82 KSPF---WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
K F I+V+T +VD Y K ++ A K+FD+M +R+V SWN+M+ G+ + G
Sbjct: 133 KFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSG---- 188
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
LV Q F + DV N+ IS
Sbjct: 189 --------DLVVAQRVFDEI---------------------------PQKDVISWNSMIS 213
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YA+ D++ A +F+ + E R SWN++I G D + +F+ M P
Sbjct: 214 GYARAGDMEKASSLFQQMPE--RNFASWNAMISGHVEFGDIDSARSFFDAM------PQK 265
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
V + T+IS YSKCGD+DSA LFD
Sbjct: 266 NNVSWM---------------------------------TMISGYSKCGDVDSACELFDQ 292
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALE 376
+ + + + AMI+ YAQ +EAL LF M PD +T+ S+IS C Q G L
Sbjct: 293 VGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLR 352
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G W ++Y G++ + + AL+D+Y+KCGSI A ELF+ L +K +V++T MI GC
Sbjct: 353 FGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCG 412
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+NG+ ++A+ LF +M++ + PN +TF+ +L A HAG +E+G+ F M K Y + P +
Sbjct: 413 INGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVPSV 471
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+HY M DL GR G+L+EAL+ ++SMP++ AG+WG LL AC++H N+E GE A FE
Sbjct: 472 DHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFE 531
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
LEP + ++NIYA G RWD V LR + K K PG S
Sbjct: 532 LEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCS 575
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 158/356 (44%), Gaps = 52/356 (14%)
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SW I T +F ++ Y M G P + S L +C + G +H
Sbjct: 72 SWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIHGQV 131
Query: 285 IHYGFDLD---VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+GF + V L+ Y K GD++ AR +FD M +R VSW +M++GY + GDL
Sbjct: 132 QKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLV 191
Query: 342 EALRLFFAMEAAGEVP--DLVTVLSMISGCGQSGALE-LGKWFDNYACSGGLKDNVMVCN 398
A R+F E+P D+++ SMISG ++G +E F + N N
Sbjct: 192 VAQRVF------DEIPQKDVISWNSMISGYARAGDMEKASSLFQQMP-----ERNFASWN 240
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG----------CAL----------- 437
A+I + + G I AR F A+P+K VSW TMI+G C L
Sbjct: 241 AMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLL 300
Query: 438 ----------NGEFVEALDLFHQMME--LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
N EAL+LF+ M+ ++++P+ +T +V+ AC+ G L G +
Sbjct: 301 FNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESY 360
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
M ++ + + + + + DL + G + +A + + K D + ++ C I+
Sbjct: 361 MRRL-GIEMDGHLATALLDLYAKCGSIDKAYELFHGLR-KKDLVAYTAMILGCGIN 414
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 315/602 (52%), Gaps = 20/602 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + + + LF RM+ I PN TF + A A Q +H V
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE-KVL 140
K S +FV ++++MYAKC ++ A +F+ M RD+ SWN ++ G Q+ E + L
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL-QLNECELEAL 287
Query: 141 CLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
LF+ R Q+ + TV+ L + K L+L + +HS + G +V
Sbjct: 288 QLFHESRATMGKMTQSTYATVIKL---CANLKQLALARQLHSCVLKHGFHLTGNVMTALA 344
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
AY+KC +L A +F + G R VVSW +II GC ++ + M D P+
Sbjct: 345 DAYSKCGELADALNIF-SMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403
Query: 258 VTTVVSLLS---SCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
T ++L S + P+ + +++ ++ H F V L++ YSK G + A
Sbjct: 404 EFTYSAMLKASLSILPPQ--IHAQVIKTNYQHIPF-----VGTALLASYSKFGSTEDALS 456
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG-QSG 373
+F + + V+W+AM+S +AQ GD + A LF M G P+ T+ S+I C S
Sbjct: 457 IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSA 516
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
++ G+ F + D + V +AL+ MYS+ G+I A+ +F ++ +VSW +MI+
Sbjct: 517 GVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMIS 576
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A +G ++A++ F QM ++ + VTFLAV+ CTH G + +G YF+ M + +++N
Sbjct: 577 GYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKIN 636
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P + HY+CM DL R GKL E + ++ MP + A +W TLL AC++H+N+E+G++ A +
Sbjct: 637 PTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADK 696
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
L LEPH ++ YV ++NIYA G+W +R +M +VKK G S + I K +F
Sbjct: 697 LLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIA 756
Query: 614 ED 615
D
Sbjct: 757 FD 758
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 229/477 (48%), Gaps = 10/477 (2%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYA 100
F ++ + ++ T + KAC + D + + +H VK ++ T++VDMY
Sbjct: 87 FSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYM 146
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
KC + ++F+ MP ++V +W +++ G A +V+ LF+ MR GI + T
Sbjct: 147 KCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFAS 206
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ A L L + VH+ + G + V VCN+ ++ YAKC ++ A+ VF +E
Sbjct: 207 VLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMET-- 264
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R +VSWN+++ G + ++L + + +T +++ C + L R +
Sbjct: 265 RDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQL 324
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC-DRTRVSWTAMISGYAQKGD 339
HS + +GF L +V+ L YSKCG++ A +F R VSWTA+ISG Q GD
Sbjct: 325 HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD 384
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 399
+ A+ LF M +P+ T +M+ ++ L + V A
Sbjct: 385 IPLAVVLFSRMREDRVMPNEFTYSAML----KASLSILPPQIHAQVIKTNYQHIPFVGTA 440
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
L+ YSK GS DA +F + +K VV+W+ M++ A G+ A LF++M ++PN
Sbjct: 441 LLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPN 500
Query: 460 RVTFLAVLQACT-HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
T +V+ AC + +++G + + K Y+ + + S + + RKG + A
Sbjct: 501 EFTISSVIDACACPSAGVDQGRQFHAISIK-YRYHDAICVSSALVSMYSRKGNIDSA 556
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDS 311
G D T+ +L +C V G +H + G D +VS +L+ MY KCG +
Sbjct: 94 GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+F+GM + V+WT++++G A E + LFF M A G P+ T S++S
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVAS 213
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
GAL+LG+ + G + +V VCN+L++MY+KCG + DA+ +F + + +VSW T+
Sbjct: 214 QGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTL 273
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+AG LN +EAL LFH+ + + T+ V++ C + L + + K +
Sbjct: 274 MAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLK-HG 332
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ N + +AD + G+L +AL+ + W ++ C + +I + +
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 552 YRLFE 556
R+ E
Sbjct: 393 SRMRE 397
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 141/315 (44%), Gaps = 26/315 (8%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W + I + + A++LF RM+++ + PN T+ + KA S +
Sbjct: 366 SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA----SLSILPPQ 421
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++K+ + FV T ++ Y+K + A +F + +DV +W+AM+ AQ G
Sbjct: 422 IHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGD 481
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E LF M + GI+ + T+ + A A + + + H+ I + V +
Sbjct: 482 CEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSS 541
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S Y++ ++ A++VF + R +VSWNS+I G ++ +R M G
Sbjct: 542 ALVSMYSRKGNIDSAQIVFE--RQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 255 RPDVTTVVSLLSSCVCPEALVQGR-----LVHSHGI-----HYGFDLDVSVINTLISMYS 304
+ D T ++++ C +V+G+ +V H I HY ++ +YS
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA---------CMVDLYS 650
Query: 305 KCGDIDSARFLFDGM 319
+ G +D L M
Sbjct: 651 RAGKLDETMSLIRDM 665
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K+ + W++ + + A LF +M I+PN T + ACA S +
Sbjct: 459 KMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGV 518
Query: 72 -YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ H +K + I V + +V MY++ +D A +F++ DRD+ SWN+MI G+
Sbjct: 519 DQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGY 578
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
AQ G+ K + F M GIQ D VT + + H
Sbjct: 579 AQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTH 615
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 295/550 (53%), Gaps = 8/550 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ + C+K F +H V F D+ + ++DMY KC R+D A +FD+M +R+
Sbjct: 10 LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
V SW A++ G+ Q G + L L M G++ + T +A + +H
Sbjct: 70 VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+ G + V N I Y+KC + MAE VF + R +VSWN++I G T+
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMP--FRNLVSWNAMIAGHTHEGNG 187
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI--N 297
SL ++ M G PD T S L +C A+ G +H+ I GF + + I +
Sbjct: 188 RKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIAS 247
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEV 356
++ +Y+KCG + A+ +FD + + +SW+A+I G+AQ+G+L EA+ LF + E+ V
Sbjct: 248 AIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNV 307
Query: 357 PDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
V LS++ G AL E GK Y ++ V N++IDMY KCG +A
Sbjct: 308 DGFV--LSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAER 365
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
LF + + VVSWT MI G +G +A+ LF++M + + V +LA+L AC+H+G
Sbjct: 366 LFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGL 425
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + YF+ + +Q+ P + HY+CM D+LGR G+LKEA + +++M +K + GIW TLL
Sbjct: 426 IRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLL 485
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
AC++H N+EIG V LF ++ + YV M+NIYA G W +R ++K +KK
Sbjct: 486 SACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKK 545
Query: 596 FPGQSLVHIN 605
GQS V IN
Sbjct: 546 EAGQSWVEIN 555
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 222/466 (47%), Gaps = 23/466 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + + + A +L L M + ++PN TF KAC L IHG V
Sbjct: 73 WTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCV 132
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F V +DMY+KC R+ A ++F+KMP R++ SWNAMI G G K L
Sbjct: 133 KSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLV 192
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS--VCNTWISA 199
LF M+ G D T +A + +H+ I G + + + +
Sbjct: 193 LFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDL 252
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-----YDGF 254
YAKC L A+ VF IE+ + ++SW+++I G ++++ +R + DGF
Sbjct: 253 YAKCGYLFEAQKVFDRIEQ--KNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGF 310
Query: 255 RPDVTTVVSLLSSCVCPEALV-QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
V+S++ ALV QG+ +H + + LD+SV N++I MY KCG + A
Sbjct: 311 ------VLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAE 364
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LF M R VSWT MI+GY + G ++A+ LF M+ G D V L+++S C SG
Sbjct: 365 RLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSG 424
Query: 374 AL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWT 429
+ E ++F + +K N+ ++D+ + G + +A+ L + P + + W
Sbjct: 425 LIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGI--WQ 482
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
T+++ C ++G ++ + +D N V ++ + AG+
Sbjct: 483 TLLSACRVHGNLEIGREVGEILFRMDT-DNPVNYVMMSNIYAEAGY 527
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 132/256 (51%), Gaps = 1/256 (0%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ LL +C QG VH+ ++ GF D+ + N LI MY KC +D A +FD M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R VSWTA++ GY Q+G+ +L L M +G P+ T + + CG G +E G
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G + +V NA IDMYSKCG IG A ++F +P + +VSW MIAG G
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHY 499
++L LF +M P+ TF + L+AC G + G + +L+T+ + ++
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246
Query: 500 SCMADLLGRKGKLKEA 515
S + DL + G L EA
Sbjct: 247 SAIVDLYAKCGYLFEA 262
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 241/421 (57%), Gaps = 35/421 (8%)
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+V W +II G + +LNFY M+ G P+ T S+L +CP + G+ +H
Sbjct: 39 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK--LCP--IEPGKALH 94
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDI-------------------------------D 310
S + GFD D+ V L+ +Y++ GD+ D
Sbjct: 95 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 154
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+AR LFDGM +R V W MI GY Q G +EAL LF M A P+ VTVLS++S CG
Sbjct: 155 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 214
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
Q GALE G+W +Y + G++ NV V AL+DMYSKCGS+ DAR +F + +K VV+W +
Sbjct: 215 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 274
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
MI G A+ G EAL LF M + L P +TF+ +L AC H+G++ +GW FN M Y
Sbjct: 275 MIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEY 334
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P++ HY CM +LLGR G +++A + V++M I+ D +WGTLL AC++H I +GE +
Sbjct: 335 GIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKI 394
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
L + ++ Y+ ++NIYA G WDGVA LRTMMK + VKK PG S + +N K
Sbjct: 395 VELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 454
Query: 611 F 611
F
Sbjct: 455 F 455
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 185/392 (47%), Gaps = 41/392 (10%)
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
YA RLD + LF + + V W A+I G A G E+ L + M G++ + T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV-------------------------- 192
+ + + K++HS + +G D+D+ V
Sbjct: 79 SSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 193 -----CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
++ YAK +L A ++F G+EE R V WN +I G T +++L +R
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEE--RDGVCWNVMIDGYTQNGMPNEALVLFR 192
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +P+ TV+S+LS+C AL GR VHS+ + G +V V L+ MYSKCG
Sbjct: 193 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++ AR +FD + D+ V+W +MI GYA G EAL+LF +M G P +T + ++S
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 368 GCGQSGALELGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKT 424
CG SG + G W F+ G++ + ++++ + G + A EL + E
Sbjct: 313 ACGHSGWVTEG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPD 371
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
V W T++ C L+G+ + +++ +L
Sbjct: 372 PVLWGTLLGACRLHGKIALGEKIVELLVDQNL 403
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 38/330 (11%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + +AL + +M +EPN TF I K C + +H V
Sbjct: 43 WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAV 98
Query: 82 KSPFWSDIFVQTTMVDMYA-------------------------------KCDRLDCAYK 110
K F SD++V+T ++D+YA K LD A
Sbjct: 99 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 158
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LFD M +RD WN MI G+ Q G + L LF M + + VTV+ + A
Sbjct: 159 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 218
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L + VHS+ + G+ +V V + Y+KC L+ A LVF I++ + VV+WNS+I
Sbjct: 219 LESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD--KDVVAWNSMI 276
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGF 289
G ++L ++ M G P T + +LS+C + +G + + YG
Sbjct: 277 VGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGI 336
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ + ++++ + G ++ A L M
Sbjct: 337 EPKIEHYGCMVNLLGRAGHVEQAYELVKNM 366
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 38/252 (15%)
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
++ L Y+ G +D + LF + + WTA+I G+A +G ++AL + M G
Sbjct: 12 LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ T S++ C +E GK + A G ++ V L+D+Y++ G + A++
Sbjct: 72 EPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127
Query: 416 LFYALPEKTVVS-------------------------------WTTMIAGCALNGEFVEA 444
LF +PEK++VS W MI G NG EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMA 503
L LF +M++ +PN VT L+VL AC G LE G W + + Q N + + +
Sbjct: 188 LVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVG--TALV 245
Query: 504 DLLGRKGKLKEA 515
D+ + G L++A
Sbjct: 246 DMYSKCGSLEDA 257
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y+ G + + LF +V WT +I G AL G +AL+ + QM+ + PN TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 464 LAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
++L+ C +E G + K+ + +L + + D+ R G + A +MP
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKL-GFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 524 IKSDAGIWGTLLCACK 539
KS + L C K
Sbjct: 134 EKSLVSLTAMLTCYAK 149
>gi|15227389|ref|NP_179312.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|4584344|gb|AAD25139.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330251504|gb|AEC06598.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 310/589 (52%), Gaps = 15/589 (2%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + +D + L F +++ EPN T + AC L + + IHG++
Sbjct: 94 SWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYV 151
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++S F VQ +++ MYA D L A KLFD+M +RDV SW+ +I + Q L
Sbjct: 152 IRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGL 210
Query: 141 CLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 198
LF M + D VTV + +A + + + +SVH F I G D ADV VCN+ I
Sbjct: 211 KLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLID 270
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K D+ A VF E R +VSWNSI+ G + ++D++L + M+ + D
Sbjct: 271 MYSKGFDVDSAFRVFD--ETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDE 328
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TVVSLL C E + + +H I G++ + +++LI Y+ C +D A + D
Sbjct: 329 VTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDS 388
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + VS + MISG A G DEA+ +F M + P+ +TV+S+++ C S L
Sbjct: 389 MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTS 445
Query: 379 KWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
KW A L N + V +++D Y+KCG+I AR F + EK ++SWT +I+ A+
Sbjct: 446 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 505
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG +AL LF +M + PN VT+LA L AC H G ++KG F M + P L
Sbjct: 506 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQ 564
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIH-RNIEIGEYVAYRL 554
HYSC+ D+L R G++ A++ ++++P +K+ A WG +L C+ + + I V +
Sbjct: 565 HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEV 624
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
ELEP ++ Y+ ++ +A W+ VA +R ++K +V+ G S+V
Sbjct: 625 LELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVR 673
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 229/484 (47%), Gaps = 37/484 (7%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNN-LTFPFIAKACAKLSDFLYSQM 75
S + +S+I++A + + + + +++ ++ N+ FP + KACAKLS
Sbjct: 7 SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLS------- 59
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
W +F ++ D Y KC L + FD M RD SWN ++ G GF
Sbjct: 60 ----------W--LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGF 107
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL---KSVHSFGIHIGVDADVSV 192
E+ L F +R+ G + + T++ IHA SL + +H + I G SV
Sbjct: 108 EEEGLWWFSKLRVWGFEPNTSTLV----LVIHACR-SLWFDGEKIHGYVIRSGFCGISSV 162
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ + YA + L +L F + E R V+SW+ +I + L ++ M+++
Sbjct: 163 QNSILCMYADSDSLSARKL-FDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHE 219
Query: 253 G-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDID 310
PD TV S+L +C E + GR VH I GFDL DV V N+LI MYSK D+D
Sbjct: 220 AKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVD 279
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA +FD R VSW ++++G+ DEAL +F M D VTV+S++ C
Sbjct: 280 SAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCK 339
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
K G + N + ++LID Y+ C + DA + ++ K VVS +T
Sbjct: 340 FFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCST 399
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-HAGFLEKGWGYFNLMTKV 489
MI+G A G EA+ +F M + PN +T +++L AC+ A W + + +
Sbjct: 400 MISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRS 456
Query: 490 YQVN 493
+N
Sbjct: 457 LAIN 460
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 14/345 (4%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS + V +AL +F M + +E + +T + + C L + IHG
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
I++ + S+ ++++D Y C +D A + D M +DV S + MI G A G ++
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA-DVSVCNTWI 197
+ +F +MR + +TV+ L A + L K H I + D+SV + +
Sbjct: 413 AISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
AYAKC ++MA F I E + ++SW II D +L + M G+ P+
Sbjct: 470 DAYAKCGAIEMARRTFDQITE--KNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++ LS+C + +G ++ + + + ++ M S+ G+ID+A L
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIK 587
Query: 318 GMCDRTRV---SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+ + + +W A++SG + +L E EV +L
Sbjct: 588 NLPEDVKAGASAWGAILSGCRNRFK-----KLIITSEVVAEVLEL 627
>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
Length = 495
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 170/484 (35%), Positives = 270/484 (55%), Gaps = 2/484 (0%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
FV ++++MY KC ++ A + F+ M R+V SW+ M+ +AQ G ++ L LF M
Sbjct: 11 FVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEE 70
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
G++ + VT + + A +A+ + + +H +D + V + Y KC+ L A
Sbjct: 71 GVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEA 130
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
VF GI E + VV+W+++I +++ + +M DG RP+ ++S+L +C
Sbjct: 131 RQVFDGIVE--KDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACS 188
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
AL +G++ H + GF DVS NTLI MY KCGD+ SA+ +F GM R +SW+A
Sbjct: 189 SAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSA 248
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
M++ A+ G +A F M+ G PD VT +S++ C GAL G + G
Sbjct: 249 MLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEG 308
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ + + N+LIDMY KCGS+ ARE+F + + V++WTTMI C + + EAL+LF
Sbjct: 309 FQSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFE 368
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M + ++P++V FL+++ +C+H+G +E+G YF M + P + H+ M DLLGR
Sbjct: 369 EMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRS 428
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
GKL EA + ++ MP++ W TLL ACK H + E VA + L P A PYV +
Sbjct: 429 GKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYVSFS 488
Query: 570 NIYA 573
NI +
Sbjct: 489 NILS 492
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 226/420 (53%), Gaps = 12/420 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + + + +AL+LF++M++ +EPN +TF + ACA +MIH +
Sbjct: 44 WSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLVA 103
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + V T +V MY KC RL A ++FD + ++DV +W+ MI +AQ+G + + +
Sbjct: 104 RKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQ 163
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M L G++ + + +M + A A L+ K H + G ADVS NT I Y
Sbjct: 164 LFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYG 223
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL A+ VF G+E R ++SW++++ D+ +R M +G +PD T
Sbjct: 224 KCGDLASAKAVFGGMER--RDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTF 281
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VSLL +C ALV+G ++H+ GF + + N+LI MY KCG + +AR +FD M
Sbjct: 282 VSLLDACSLLGALVEGHVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAAREIFDRMSH 341
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R ++WT MI+ Q EAL LF ME AG PD V LS+I C SG +E G+ +
Sbjct: 342 RNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIY 401
Query: 382 -----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
++ + + G++ V ++D+ + G + +A EL +P E VV W T+++ C
Sbjct: 402 FLKMVEDQSFTPGVEHFV----GMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSAC 457
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 301/570 (52%), Gaps = 53/570 (9%)
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++++YAK L+ A+K+F+++P DV SW +I GFA++G VL LF M+ G+ +
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386
Query: 155 -FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
F + L + + + K +H + + G+D D + N+ + Y KC AE +F
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLF 446
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM----------IYDG---------- 253
+ E + VSWN ++ S++ +R + + DG
Sbjct: 447 GLMAE--KDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504
Query: 254 -------------FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
F ++ +L+S + L G+ +H+ + G D V N+LI
Sbjct: 505 LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGL--GKQIHTQVLKVGVLDDGFVRNSLI 562
Query: 301 SMYSKCGDIDSARFLFDGM------------CDRT---RVSWTAMISGYAQKGDLDEALR 345
MY KCG+++ A +F + CD VSW++M+SGY Q G ++AL+
Sbjct: 563 DMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALK 622
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
F M + D T+ S++S C +G LELG+ Y G +V + +++IDMY
Sbjct: 623 TFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYV 682
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCGS+ DA +F ++ VV WT+MI+GCAL+G+ EA+ LF M+ + PN V+F+
Sbjct: 683 KCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVG 742
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL AC+HAG LE+G YF LM +VY + P H++CM DL GR G+L E +F+ + I
Sbjct: 743 VLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAIS 802
Query: 526 SDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLR 585
+ +W + L +C++H+NIE+G +V +L ELEP A PY+ ++I A RW+ A +R
Sbjct: 803 KLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIR 862
Query: 586 TMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++M++ VKK P QS + + + +F + D
Sbjct: 863 SLMQQRGVKKNPSQSWIQLKNQVHSFVMGD 892
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 221/468 (47%), Gaps = 55/468 (11%)
Query: 39 LLLFRRMKKNDIEPNNLTFPFIAKACAK-LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
L LF +M+ + PN T + K+C+ ++D + IHG I+++ D + +++D
Sbjct: 372 LGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILD 431
Query: 98 MYAKCDRLDCAYKLFD-------------------------------KMPDRDVASWNAM 126
Y KC A KLF ++P +D ASWN M
Sbjct: 432 YYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTM 491
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL---KSVHSFGIH 183
I G + G L L Y M G + +T + A + A LS+L K +H+ +
Sbjct: 492 IDGLMRNGCERVALELLYKMVAAGPAFNKLT---FSIALVLASSLSVLGLGKQIHTQVLK 548
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGI-------------EEGLRTVVSWNSII 230
+GV D V N+ I Y KC +++ A ++F+ + ++ + VSW+S++
Sbjct: 549 VGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMV 608
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G +F+D+L + MI D T+ S++S+C L GR VH + G
Sbjct: 609 SGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHG 668
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
LDV + +++I MY KCG ++ A +F+ DR V WT+MISG A G EA+RLF M
Sbjct: 669 LDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELM 728
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
G P+ V+ + +++ C +G LE G K+F G++ ++D+Y + G
Sbjct: 729 INEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGR 788
Query: 410 IGDARELFY--ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ + +E + A+ + + V W + ++ C ++ + + +++EL+
Sbjct: 789 LNEIKEFIHNNAISKLSSV-WRSFLSSCRVHKNIEMGIWVCKKLLELE 835
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 174/412 (42%), Gaps = 57/412 (13%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N ++ YAK +L+ A +F I + V SW +I G D L + M G
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQ--TDVFSWTVLISGFARIGLSADVLGLFTKMQDQG 382
Query: 254 FRPDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
P+ T+ +L SC + G+ +H + G DLD + N+++ Y KC A
Sbjct: 383 VCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYA 442
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDE------------------------------ 342
LF M ++ VSW M+S Y Q GD+ +
Sbjct: 443 EKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCER 502
Query: 343 -ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
AL L + M AAG + +T + L LGK G+ D+ V N+LI
Sbjct: 503 VALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLI 562
Query: 402 DMYSKCGSIGDARELFYALPEKT---------------VVSWTTMIAGCALNGEFVEALD 446
DMY KCG + A +F LP+++ VSW++M++G NG F +AL
Sbjct: 563 DMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALK 622
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
F M+ + ++ T +V+ AC AG LE G + K+ ++ S + D+
Sbjct: 623 TFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGH-GLDVFLGSSIIDMY 681
Query: 507 GRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
+ G L +A L F Q+ + +W +++ C +H A RLFEL
Sbjct: 682 VKCGSLNDAWLIFNQAK--DRNVVLWTSMISGCALHGQ----GREAVRLFEL 727
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 141/331 (42%), Gaps = 25/331 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + AL L +M N LTF + LS + IH ++
Sbjct: 488 WNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVL 547
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR---------------DVASWNAM 126
K D FV+ +++DMY KC ++ A +F +P + SW++M
Sbjct: 548 KVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSM 607
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+ G+ Q G E L F M ++ D T+ + A A L L + VH + IG
Sbjct: 608 VSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGH 667
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
DV + ++ I Y KC L A L+F ++ R VV W S+I GC + +++ +
Sbjct: 668 GLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKD--RNVVLWTSMISGCALHGQGREAVRLF 725
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQG----RLVHSHGIHYGFDLDVSVINTLISM 302
MI +G P+ + V +L++C L +G RL+ YG ++ +
Sbjct: 726 ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMRE---VYGIRPGAEHFTCMVDL 782
Query: 303 YSKCGDIDSAR-FLFDGMCDRTRVSWTAMIS 332
Y + G ++ + F+ + + W + +S
Sbjct: 783 YGRAGRLNEIKEFIHNNAISKLSSVWRSFLS 813
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+S + V AL F M + +E + T + ACA + +HG+I
Sbjct: 604 WSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQ 663
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+F+ ++++DMY KC L+ A+ +F++ DR+V W +MI G A G + +
Sbjct: 664 KIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVR 723
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDADVSVCN 194
LF M GI + V+ +G+ A HA K+ L++ V +GI G + + +
Sbjct: 724 LFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREV--YGIRPGAEHFTCMVD 781
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ A + N++K E + L +V W S + C
Sbjct: 782 LYGRA-GRLNEIK--EFIHNNAISKLSSV--WRSFLSSC 815
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 296/563 (52%), Gaps = 39/563 (6%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
++F ++ A L LF M RD+ S+NA+I GF+ G + + ++
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVY---- 126
Query: 148 LVGIQADF------VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L +QAD +T+ + AA +L K H + +G A+ V + + YA
Sbjct: 127 LALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYA 186
Query: 202 KCNDLKMAELVF---------------------RGIEEGLRTV--------VSWNSIIGG 232
K + + A+ F + +EE R ++W +++ G
Sbjct: 187 KMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTG 246
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
T ++L +R M + G D T S+L++C AL QG+ +H++ I +D +
Sbjct: 247 FTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDN 306
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
V V + L+ MYSKC I A +F M + +SWTA+I GY Q G +EA+R+F M+
Sbjct: 307 VFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G PD T+ S+IS C +LE G F A GL + V NAL+ +Y KCGSI D
Sbjct: 367 DGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIED 426
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
A LF + VSWT +++G A G E +DLF +M+ ++P+ VTF+ VL AC+
Sbjct: 427 AHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSR 486
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 532
AGF+EKG YF+ M K + + P +HY+CM DL R GKLKEA +F++ MP+ DA WG
Sbjct: 487 AGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWG 546
Query: 533 TLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQ 592
TLL AC++ ++EIG++ A L E++P + A YV + +++A G+W+ VA LR M+ Q
Sbjct: 547 TLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQ 606
Query: 593 VKKFPGQSLVHINGKTCTFTVED 615
VKK PG S + K F+ +D
Sbjct: 607 VKKEPGCSWIKYKNKVHIFSADD 629
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 214/443 (48%), Gaps = 39/443 (8%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK------ 101
+ + P+ +T + A + L D + H I++ F ++ FV + +VDMYAK
Sbjct: 134 SSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGD 193
Query: 102 -------------------------CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
C ++ A +LF+ M DRD +W M+ GF Q G
Sbjct: 194 AKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLE 253
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L +F MR GI D T + A L K +H++ I D +V V +
Sbjct: 254 SEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSAL 313
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+KC +K+AE VFR + + ++SW ++I G ++++ + M DG P
Sbjct: 314 VDMYSKCRSIKLAETVFRRMT--CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T+ S++SSC +L +G H + G ++V N L+++Y KCG I+ A LF
Sbjct: 372 DDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +VSWTA++SGYAQ G E + LF M A G PD VT + ++S C ++G +E
Sbjct: 432 DEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVE 491
Query: 377 LGK-WFDNYACSGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMI 432
G+ +F + G+ D+ C +ID+YS+ G + +A E +P + W T++
Sbjct: 492 KGRSYFHSMQKDHGIVPIDDHYTC--MIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL 549
Query: 433 AGCALNGEFVEALDLFHQMMELD 455
+ C L G+ ++E+D
Sbjct: 550 SACRLRGDMEIGKWAAENLLEID 572
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 159/364 (43%), Gaps = 45/364 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + +AL +FRRM+ I + TF I AC LS + IH +I+
Sbjct: 240 WTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + ++FV + +VDMY+KC + A +F +M +++ SW A+IVG+ Q G E+ +
Sbjct: 300 RTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVR 359
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ GI D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 360 VFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYG 419
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F E VSW +++ G + ++++ + M+ G +PD T
Sbjct: 420 KCGSIEDAHRLFD--EMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTF 477
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +LS+C S+ G ++ R F M
Sbjct: 478 IGVLSAC-----------------------------------SRAGFVEKGRSYFHSMQK 502
Query: 322 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ +T MI Y++ G L EA M PD + +++S C G +E
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMH---PDAIGWGTLLSACRLRGDME 559
Query: 377 LGKW 380
+GKW
Sbjct: 560 IGKW 563
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + I + +A+ +F M+++ I+P++ T + +CA L+ H
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHC 397
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ S I V +V +Y KC ++ A++LFD+M D SW A++ G+AQ G ++
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKE 457
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS-VHSFGIHIGVDADVSVCNTWI 197
+ LF M G++ D VT +G+ A A + +S HS G+ I
Sbjct: 458 TIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMI 517
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
Y++ LK AE + + + W +++ C
Sbjct: 518 DLYSRSGKLKEAEEFIKQMPMH-PDAIGWGTLLSAC 552
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 301/579 (51%), Gaps = 4/579 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V NE+ + L M + PN T +AC L + + +HG +
Sbjct: 178 WTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLAL 237
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F V++T++ MY++C + AY+ F K+ +D+ SW ++I ++ G + + L
Sbjct: 238 KNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLH 297
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ M+ I D + + + ++ + K+ H+ + N +S Y
Sbjct: 298 LFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYC 357
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A +F ++ W+++I G + + + ++F R M+ G PD+ ++
Sbjct: 358 KFGHLGTANKIFHSFH---KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSL 414
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS++SSC A+ GR +H + I +VSV N+L+ MY K G + + +F
Sbjct: 415 VSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQ 474
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R +SW +IS Y Q G L EA+ LF M P+ VT + ++S C +L+ G+
Sbjct: 475 RDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKI 534
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y G + N+ + ALIDMY+KCG + +R+LF + E+ V+ W MI+ ++G
Sbjct: 535 HQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHV 594
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A+++F M E +++PN TFL++L AC H G + +G F+ M K Y + P L HY+
Sbjct: 595 ESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQK-YGIEPSLKHYAS 653
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G L+ A V SMPI D +WG+LL ACKIH E+G +A E +P +
Sbjct: 654 IIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKN 713
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
Y+ ++++Y+ GRWD V +R MMK+ V+K G S
Sbjct: 714 DGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 752
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 263/564 (46%), Gaps = 22/564 (3%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+ L ++ S I WNS I+ + +A + +M+ + PN T P + C
Sbjct: 59 AFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTC 118
Query: 65 AKLSDFLYSQMIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
A+L F + IHG K F + + ++ + MY+KC ++ A +F ++ +DV +W
Sbjct: 119 AELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTW 178
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
A+IVG+ Q + L + M +G ++ T+ QA + L K +H +
Sbjct: 179 TALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALK 238
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G V +T +S Y++C + A F +++ + ++SW SII + + L
Sbjct: 239 NGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQ--KDLISWTSIIAVHSKFGLMSECL 296
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ + M PD + +L + + +G+ H+ + L N L+SMY
Sbjct: 297 HLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMY 356
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
K G + +A +F ++ W+ MI GY+ G ++ + M G PDL +++
Sbjct: 357 CKFGHLGTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLV 415
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
S+IS C Q GA+ +G+ YA + +NV V N+L+DMY K G + +F+ ++
Sbjct: 416 SVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQR 475
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
V+SW T+I+ +G EA+ LF +M++ + PN+VT + VL AC H L++G
Sbjct: 476 DVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEG---- 531
Query: 484 NLMTKVYQVNPE------LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
K++Q E + + + D+ + G+L+ + S + D +W ++
Sbjct: 532 ---EKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTE-ERDVILWNVMISN 587
Query: 538 CKIHRNIEIGEYVAYRLFELEPHS 561
+H ++E A +F+L S
Sbjct: 588 YGMHGHVE----SAMEIFQLMEES 607
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 218/464 (46%), Gaps = 6/464 (1%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ + +++F T ++ YA + + LF + +D+ WN++I G
Sbjct: 30 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 89
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNT 195
++ + MR + TV + + ++H +G+ + ++ ++
Sbjct: 90 QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSS 149
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+I Y+KC ++ A ++F I ++ VV+W ++I G ++ L M G
Sbjct: 150 FIYMYSKCGHVESASIMFSEIT--VKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 207
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T+ S +CV +ALV+G+ +H + GF V +T++SMYS+CG + A
Sbjct: 208 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 267
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + + +SWT++I+ +++ G + E L LF+ M+A+ +PD + + M+ G G S +
Sbjct: 268 FCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRI 327
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
GK F + + NAL+ MY K G +G A ++F++ K+ W+TMI G
Sbjct: 328 FEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGY 386
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ G+ + + +M+ L P+ + ++V+ +C+ G + G K +
Sbjct: 387 SNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIK-NSIIEN 445
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
++ + + D+ G+ G + ++ D W TL+ + K
Sbjct: 446 VSVANSLMDMYGKSGHVTATWRIFHR-TLQRDVISWNTLISSYK 488
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 43/110 (39%)
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
WF + + G +NV L+ Y+ + LF + K + W ++I NG
Sbjct: 28 WFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNG 87
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
++ A D + QM PN+ T V+ C G L +K+
Sbjct: 88 DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKL 137
>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Glycine max]
Length = 644
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 290/561 (51%), Gaps = 9/561 (1%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
K AK + + +H H++K F + +Q ++ +Y KC D A KLF+++ R+V
Sbjct: 58 KVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVRNVV 117
Query: 122 SWNAMIVGFAQMG-------FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
SWN +I G G ++ F M L + D T GL + + +
Sbjct: 118 SWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDIDMG 177
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
+H F + +G+D D V + + YA+C ++ A VF ++ R +V WN +I
Sbjct: 178 FQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQH--RDLVVWNVMISCYA 235
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+++ + M +DG D T +LLS C E G+ VH H + FD DV
Sbjct: 236 LNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVL 295
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V + LI+MY+K +I A LFD M R V+W +I GY + + +E ++L M G
Sbjct: 296 VASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNEVMKLLREMLREG 355
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
PD +T+ S IS CG A+ +A ++ + V N+LI YSKCGSI A
Sbjct: 356 FSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSAC 415
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+ F E +VSWT++I A +G EA ++F +M+ + P++++FL VL AC+H G
Sbjct: 416 KCFRLTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACSHCG 475
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
+ KG YFNLMT VY++ P+ HY+C+ DLLGR G + EA +F++SMP+++++ G
Sbjct: 476 LVTKGLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLINEAFEFLRSMPMEAESNTLGAF 535
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
+ +C +H NI + ++ A +LF +EP Y M+NIYA W V +R MM
Sbjct: 536 VASCNLHANIGLAKWAAEKLFTIEPEKNVNYAVMSNIYASHRHWSDVERVRRMMGNKCDA 595
Query: 595 KFPGQSLVHINGKTCTFTVED 615
+ PG S + I + +F D
Sbjct: 596 RVPGCSWIEITNQVHSFVSND 616
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 202/429 (47%), Gaps = 15/429 (3%)
Query: 22 WNSQIREAV---DKNE----AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
WN IR V D NE + F+RM + P++ TF + C K D
Sbjct: 119 WNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDIDMGF 178
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H VK D FV + +VD+YA+C ++ A ++F + RD+ WN MI +A
Sbjct: 179 QLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISCYALNC 238
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E+ +F MR G D T L ++ K VH + + D+DV V +
Sbjct: 239 LPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVAS 298
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD--DSLNFYRHMIYD 252
I+ YAK ++ A +F + +R VV+WN+II G YG++ + + + R M+ +
Sbjct: 299 ALINMYAKNENIVDAHRLFDNMV--IRNVVAWNTIIVG--YGNRREGNEVMKLLREMLRE 354
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
GF PD T+ S +S C A+ + H+ + F +SV N+LIS YSKCG I SA
Sbjct: 355 GFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSA 414
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
F + VSWT++I+ YA G EA +F M + G +PD ++ L ++S C
Sbjct: 415 CKCFRLTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACSHC 474
Query: 373 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTT 430
G + G +F+ + + L+D+ + G I +A E ++P E +
Sbjct: 475 GLVTKGLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLINEAFEFLRSMPMEAESNTLGA 534
Query: 431 MIAGCALNG 439
+A C L+
Sbjct: 535 FVASCNLHA 543
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 35/359 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I +A ++F M+ + + TF + C L + + + +HGHI+
Sbjct: 227 WNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHIL 286
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F SD+ V + +++MYAK + + A++LFD M R+V +WN +IVG+ +V+
Sbjct: 287 RLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNEVMK 346
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G D +T+ + ++ H+F + +SV N+ ISAY+
Sbjct: 347 LLREMLREGFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYS 406
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A FR E +VSW S+I + ++ + M+ G PD +
Sbjct: 407 KCGSITSACKCFRLTREP--DLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISF 464
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +LS+C LV + G+HY N + S+Y D
Sbjct: 465 LGVLSAC------SHCGLV-TKGLHY--------FNLMTSVYKIVPDSG----------- 498
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+T ++ + G ++EA +M E T+ + ++ C + L KW
Sbjct: 499 ----HYTCLVDLLGRYGLINEAFEFLRSMPMEAESN---TLGAFVASCNLHANIGLAKW 550
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 301/579 (51%), Gaps = 4/579 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V NE+ + L M + PN T +AC L + + +HG +
Sbjct: 208 WTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLAL 267
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F V++T++ MY++C + AY+ F K+ +D+ SW ++I ++ G + + L
Sbjct: 268 KNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLH 327
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ M+ I D + + + ++ + K+ H+ + N +S Y
Sbjct: 328 LFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYC 387
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A +F ++ W+++I G + + + ++F R M+ G PD+ ++
Sbjct: 388 KFGHLGTANKIFHSFH---KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSL 444
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VS++SSC A+ GR +H + I +VSV N+L+ MY K G + + +F
Sbjct: 445 VSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQ 504
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R +SW +IS Y Q G L EA+ LF M P+ VT + ++S C +L+ G+
Sbjct: 505 RDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKI 564
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y G + N+ + ALIDMY+KCG + +R+LF + E+ V+ W MI+ ++G
Sbjct: 565 HQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHV 624
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A+++F M E +++PN TFL++L AC H G + +G F+ M K Y + P L HY+
Sbjct: 625 ESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQK-YGIEPSLKHYAS 683
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G L+ A V SMPI D +WG+LL ACKIH E+G +A E +P +
Sbjct: 684 IIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKN 743
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
Y+ ++++Y+ GRWD V +R MMK+ V+K G S
Sbjct: 744 DGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 782
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 263/564 (46%), Gaps = 22/564 (3%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+ L ++ S I WNS I+ + +A + +M+ + PN T P + C
Sbjct: 89 AFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTC 148
Query: 65 AKLSDFLYSQMIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
A+L F + IHG K F + + ++ + MY+KC ++ A +F ++ +DV +W
Sbjct: 149 AELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTW 208
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
A+IVG+ Q + L + M +G ++ T+ QA + L K +H +
Sbjct: 209 TALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALK 268
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
G V +T +S Y++C + A F +++ + ++SW SII + + L
Sbjct: 269 NGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQ--KDLISWTSIIAVHSKFGLMSECL 326
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+ + M PD + +L + + +G+ H+ + L N L+SMY
Sbjct: 327 HLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMY 386
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
K G + +A +F ++ W+ MI GY+ G ++ + M G PDL +++
Sbjct: 387 CKFGHLGTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLV 445
Query: 364 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
S+IS C Q GA+ +G+ YA + +NV V N+L+DMY K G + +F+ ++
Sbjct: 446 SVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQR 505
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
V+SW T+I+ +G EA+ LF +M++ + PN+VT + VL AC H L++G
Sbjct: 506 DVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEG---- 561
Query: 484 NLMTKVYQVNPE------LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
K++Q E + + + D+ + G+L+ + S + D +W ++
Sbjct: 562 ---EKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTE-ERDVILWNVMISN 617
Query: 538 CKIHRNIEIGEYVAYRLFELEPHS 561
+H ++E A +F+L S
Sbjct: 618 YGMHGHVE----SAMEIFQLMEES 637
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 225/489 (46%), Gaps = 9/489 (1%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
PNN F +K L H I+ + +++F T ++ YA + + L
Sbjct: 38 PNNCLHSFFSKPNLTFQSLL---QFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHL 94
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
F + +D+ WN++I G ++ + MR + TV +
Sbjct: 95 FRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMF 154
Query: 172 SLLKSVHSFGIHIGV-DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ ++H +G+ + ++ +++I Y+KC ++ A ++F I ++ VV+W ++I
Sbjct: 155 NHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEIT--VKDVVTWTALI 212
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G ++ L M G P+ T+ S +CV +ALV+G+ +H + GF
Sbjct: 213 VGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFL 272
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
V +T++SMYS+CG + A F + + +SWT++I+ +++ G + E L LF+ M
Sbjct: 273 CFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEM 332
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+A+ +PD + + M+ G G S + GK F + + NAL+ MY K G +
Sbjct: 333 QASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHL 392
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
G A ++F++ K+ W+TMI G + G+ + + +M+ L P+ + ++V+ +C
Sbjct: 393 GTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSC 451
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+ G + G K + ++ + + D+ G+ G + ++ D
Sbjct: 452 SQVGAINIGRSIHCYAIK-NSIIENVSVANSLMDMYGKSGHVTATWRIFHR-TLQRDVIS 509
Query: 531 WGTLLCACK 539
W TL+ + K
Sbjct: 510 WNTLISSYK 518
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 251/441 (56%)
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
K +H G + V + IS Y KC+ + A +F + + V +NS++ G
Sbjct: 30 KQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYA 89
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+ D + + M G + T++ L+ C P L G VH + +G D+D S
Sbjct: 90 LNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSS 149
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V N L++MY K G+ID R LFD M + ++W AMI+GYAQ G + L L+ ME+ G
Sbjct: 150 VGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKG 209
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
PD +T++ ++S C GAL +GK + G N + NAL++MY++CG++ AR
Sbjct: 210 FCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKAR 269
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
++F +P K+VVSWT +I G ++G+ A+ LF +M+ ++P+ F++VL AC+HAG
Sbjct: 270 DIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAG 329
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 534
KG YF +M + Y + P HYSCM DLLGR G+L EA + ++SM +++D +WG L
Sbjct: 330 LTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGAL 389
Query: 535 LCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK 594
L ACKIHRN+E+ E ++ ELEP + YV ++N+Y G +G+ +R +M++ ++K
Sbjct: 390 LGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLK 449
Query: 595 KFPGQSLVHINGKTCTFTVED 615
K PG S V G+ F D
Sbjct: 450 KDPGCSYVEFKGRVHLFFAGD 470
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 228/438 (52%), Gaps = 9/438 (2%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M ++ PN TFPF K+CA LS + + +H H+ K+ + FVQT+++ MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 105 LDCAYKLFDKMPD--RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
+D A KLFD+ P + +N+++ G+A ++ V+ LF MR +G++ + VT++GL
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
Q +L L VH F + G+D D SV N ++ Y K ++ +F E +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFD--EMPRKG 178
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
+++WN++I G ++ L Y+ M GF PD T+V +LSSC AL G+ V
Sbjct: 179 LITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
+GF + + N L++MY++CG++ AR +FDGM ++ VSWTA+I GY G +
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALI 401
A+ LF M G PD +S++S C +G G +F GL+ + ++
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358
Query: 402 DMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
D+ + G + +AREL ++ + + W ++ C ++ A F Q++EL+ P
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELE--PTN 416
Query: 461 VTFLAVLQAC-THAGFLE 477
+ +L T AG LE
Sbjct: 417 TGYYVLLSNVYTEAGNLE 434
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 153/315 (48%), Gaps = 8/315 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS + + ++LF M++ +E N +T + + C + +HG V
Sbjct: 81 YNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCV 140
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D V ++ MY K +DC KLFD+MP + + +WNAMI G+AQ G VL
Sbjct: 141 KFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLE 200
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ M G D +T++G+ + H LS+ K V G ++ + N ++ YA
Sbjct: 201 LYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYA 260
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C +LK A +F G+ +++VVSW +IIGG + + ++ + MI G +PD T
Sbjct: 261 RCGNLKKARDIFDGMP--VKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAF 318
Query: 262 VSLLSSCVCPEALVQGRLVHSHGI---HYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
VS+LS+ C A + + + G+ YG + ++ + + G ++ AR L +
Sbjct: 319 VSVLSA--CSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIES 376
Query: 319 MCDRTRVS-WTAMIS 332
M R + W A++
Sbjct: 377 MQVRADGALWGALLG 391
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/610 (30%), Positives = 303/610 (49%), Gaps = 40/610 (6%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMI 76
I W + + + + H+AL L+ M ++ IE PN + + KAC + + +M+
Sbjct: 68 NIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMV 127
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H HI ++ DI + ++DMY KC L A ++F ++P ++ SWN +I+G+A+ G +
Sbjct: 128 HYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLI 187
Query: 137 EKVLCLFYNM------------------------RLV------GIQADFVTVMGLTQAAI 166
+ + LF M R V G++ D T + +A
Sbjct: 188 DDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACG 247
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF------RGIEEGL 220
+ L L + +H + I G ++ + I Y+ C L A +F + E L
Sbjct: 248 CSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESL 307
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
WNS++ G + ++L+ HM G R D T +L C+ + L V
Sbjct: 308 AL---WNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQV 364
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H I G++LD V + LI +Y+K G I++A LF+ + D+ V+W+++I+G A+ G
Sbjct: 365 HGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSD 424
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
A LF M G D + ++ C + + GK + G + +V AL
Sbjct: 425 KLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTAL 484
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
IDMY+KCG I DA LF L E +SWT++I GCA NG EA+ L H+M+E +PN+
Sbjct: 485 IDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNK 544
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+T L VL AC H+G +E+ W FN + + + P HY+CM D+LG+ G+ +EA+ +
Sbjct: 545 ITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLIS 604
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
MP K D IW +LL AC ++N ++ VA L P + Y+ ++N+YA G WD
Sbjct: 605 EMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDS 664
Query: 581 VANLRTMMKR 590
V+ +R +K+
Sbjct: 665 VSKVRETVKK 674
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 245/540 (45%), Gaps = 42/540 (7%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
N++ F + C + ++ +H HI+KS F + IF+ M+ +Y+KC + A +F
Sbjct: 4 NHIQIAF--RYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMF 61
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI-QADFVTVMGLTQAAIHAKHL 171
D+MP R++ SW M+ + L L+ M I Q + + +A +++
Sbjct: 62 DEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNV 121
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI--------------- 216
L K VH +D D+ + N + Y KC L+ A+ VF I
Sbjct: 122 ELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGY 181
Query: 217 -EEGL-------------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
++GL +VSWNSII G + +L F M G + D T
Sbjct: 182 AKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLV-DNASSRALRFVSMMHGKGLKMDEFTFP 240
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
S+L +C C + L+ GR +H + I GF+ I+ LI MYS C + A +FD
Sbjct: 241 SVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRN 300
Query: 323 TRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ VS W +M+SG+ GD EAL + M +G D T ++ C L L
Sbjct: 301 SSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSL 360
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
+ + G + + +V + LID+Y+K GSI +A LF LP+K VV+W+++I GCA
Sbjct: 361 ASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCAR 420
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL-MTKVYQVNPEL 496
G A LF M+ L L+ + VL+AC+ + G +L + K Y+ +
Sbjct: 421 FGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVV 480
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+ + D+ + G +++AL + + D W +++ C + E + +++ E
Sbjct: 481 T--TALIDMYAKCGDIEDALSLFGCLS-EIDTMSWTSIIVGCAQNGRAEEAISLLHKMIE 537
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 211/467 (45%), Gaps = 53/467 (11%)
Query: 10 LNKIYRSSTINQ----WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
++ +R+S++++ WNS + V + +AL + M ++ + + TF + K C
Sbjct: 294 FDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICM 353
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+ + +HG ++ S + D V + ++D+YAK ++ A +LF+++PD+DV +W++
Sbjct: 354 NFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSS 413
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
+I G A+ G + LF +M +G+Q D FV + L + A H K VHS +
Sbjct: 414 LITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASH-QHGKQVHSLCLKK 472
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G +++ V I YAKC D++ A +F + E +SW SII GC + +++++
Sbjct: 473 GYESEGVVTTALIDMYAKCGDIEDALSLFGCLSE--IDTMSWTSIIVGCAQNGRAEEAIS 530
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSC----VCPEAL-VQGRLVHSHGI-----HYGFDLDVS 294
MI G +P+ T++ +L++C + EA V + +HG+ HY
Sbjct: 531 LLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHY------- 583
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
N ++ + + G + A L M + + W++++ + D L A
Sbjct: 584 --NCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRD--LANIVAEHLL 639
Query: 354 GEVPDLVTVLSMISG-----------------CGQSGALELGKWFDNYACSGGLKDNVMV 396
P+ V+V M+S + G GK F +++ +
Sbjct: 640 ATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYFMEHLHL 699
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
+A K G G ++ Y + E +VSW +IAG A N E
Sbjct: 700 GHA------KQGLNGGVVKVIYPILEPDLVSWNNVIAGLADNASPYE 740
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 296/564 (52%), Gaps = 16/564 (2%)
Query: 59 FIAKACA--KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM- 115
F+AK C+ K +++QM+ + SP ++ A LF +
Sbjct: 23 FLAKQCSSSKTLQQVHAQMVVKSSIHSP-------NNHLLSKAIHLKNFTYASLLFSHIA 75
Query: 116 PDRDVASWNAMIVGFAQM-GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
P + ++N MI L LF+ M + + + T + + LS
Sbjct: 76 PHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPA 135
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
++ HS + + +D ++ I+ Y++C + A VF I R +VSWNS+I G
Sbjct: 136 RAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPR--RDLVSWNSMIAGYA 193
Query: 235 YGDKFDDSLNFYRHM-IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+++ + M DGF PD ++VS+L +C L GR V + G L+
Sbjct: 194 KAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNS 253
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ + LISMY+KCGD+ SAR +FDGM R ++W A+ISGYAQ G DEA+ LF AM+
Sbjct: 254 YIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKED 313
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
+ +T+ +++S C GAL+LGK D YA G + ++ V ALIDMY+KCGS+ A
Sbjct: 314 CVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASA 373
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL--DLRPNRVTFLAVLQACT 471
+ +F +P+K SW MI+ A +G+ EAL LF M + RPN +TF+ +L AC
Sbjct: 374 QRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACV 433
Query: 472 HAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
HAG + +G+ F++M+ ++ + P++ HYSCM DLL R G L EA D ++ MP K D
Sbjct: 434 HAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTL 493
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRN 591
G LL AC+ +N++IGE V + E++P ++ Y+ + IYA W+ A +R +M++
Sbjct: 494 GALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQK 553
Query: 592 QVKKFPGQSLVHINGKTCTFTVED 615
+ K PG S + + F D
Sbjct: 554 GITKTPGCSWIEVENHLHEFHAGD 577
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 209/403 (51%), Gaps = 7/403 (1%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
AL LF RM + PNN TFPF +CA L+ ++ H + K SD +++
Sbjct: 100 ALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSLIT 159
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFV 156
MY++C R+ A K+FD++P RD+ SWN+MI G+A+ G + + +F M R G + D +
Sbjct: 160 MYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEM 219
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
+++ + A L L + V F + G+ + + + IS YAKC DL A +F G+
Sbjct: 220 SLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGM 279
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R V++WN++I G D++++ + M D + T+ ++LS+C AL
Sbjct: 280 --AARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDL 337
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
G+ + + GF D+ V LI MY+KCG + SA+ +F M + SW AMIS A
Sbjct: 338 GKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALAS 397
Query: 337 KGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 393
G EAL LF M E G P+ +T + ++S C +G + G + FD + GL
Sbjct: 398 HGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPK 457
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
+ + ++D+ ++ G + +A +L +PEK V+ ++ C
Sbjct: 458 IEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGAC 500
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 169/362 (46%), Gaps = 38/362 (10%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS I A +A+ +F M + D EP+ ++ + AC +L D + + G
Sbjct: 184 SWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGF 243
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
+V+ + ++ + ++ MYAKC L A ++FD M RDV +WNA+I G+AQ G ++
Sbjct: 244 VVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEA 303
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ LF+ M+ + + +T+ + A L L K + + G D+ V I
Sbjct: 304 ISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDM 363
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD--GFRPD 257
YAKC L A+ VF+ + + + SWN++I K ++L+ ++ M + G RP+
Sbjct: 364 YAKCGSLASAQRVFKEMPQ--KNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPN 421
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T V LLS+C VH+ ++ G+ L +++TL + K
Sbjct: 422 DITFVGLLSAC-----------VHAGLVNEGYRL-FDMMSTLFGLVPKIEH--------- 460
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
++ M+ A+ G L EA L +E E PD VT+ +++ C +++
Sbjct: 461 ---------YSCMVDLLARAGHLYEAWDL---IEKMPEKPDKVTLGALLGACRSKKNVDI 508
Query: 378 GK 379
G+
Sbjct: 509 GE 510
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 287/541 (53%), Gaps = 16/541 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDR---LDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+HG ++KS ++ + ++D C L A +F+ + V WN+MI G++
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+K L + M G D+ T + +A + + VH F + G + ++ V
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYV 144
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ Y C ++ VF I + VV+W S+I G ++F D++ +R M +
Sbjct: 145 STCLLHMYMCCGEVNYGLRVFEDIPQW--NVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD--------LDVSVINTLISMYS 304
G + + T +V LL +C + +V G+ H GFD +V + +LI MY+
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCGD+ +AR+LFDGM +RT VSW ++I+GY+Q GD +EAL +F M G PD VT LS
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 365 MISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+I G +LG+ Y G +KD +VC AL++MY+K G A++ F L +K
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC-ALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGY 482
++WT +I G A +G EAL +F +M E + P+ +T+L VL AC+H G +E+G Y
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
F M ++ + P + HY CM D+L R G+ +EA V++MP+K + IWG LL C IH
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+E+ + + + E E + YV ++NIYA GRW V +R MK +V K G S V
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Query: 603 H 603
Sbjct: 562 E 562
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 232/468 (49%), Gaps = 22/468 (4%)
Query: 4 SSLPPRLNKIYRSSTINQ--------WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNL 55
++ P +N Y S WNS IR + KAL+ ++ M + P+
Sbjct: 49 TTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYF 108
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TFP++ KAC+ L D + +HG +VK+ F +++V T ++ MY C ++ ++F+ +
Sbjct: 109 TFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
P +V +W ++I GF + F M+ G++A+ ++ L A K + K
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 176 SVHSFGIHIGVDA--------DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
H F +G D +V + + I YAKC DL+ A +F G+ E RT+VSWN
Sbjct: 229 WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPE--RTLVSWN 286
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
SII G + +++L + M+ G PD T +S++ + + G+ +H++
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF D +++ L++MY+K GD +SA+ F+ + + ++WT +I G A G +EAL +F
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 348 FAMEAAGE-VPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYS 405
M+ G PD +T L ++ C G +E G ++F GL+ V ++D+ S
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 406 KCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMM 452
+ G +A L +P K V+ W ++ GC ++ E +E D M+
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH-ENLELTDRIRSMV 513
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 278/506 (54%), Gaps = 13/506 (2%)
Query: 114 KMPDRDVASWNAMIVGFAQMGF---LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
K P R VA + ++ FA L + + M G+ AD +T L +
Sbjct: 11 KPPLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGA 70
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ K VH G + + V NT ++ Y K N L+ AE +F + E R VVSW ++I
Sbjct: 71 VQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPE--RNVVSWTTMI 128
Query: 231 GGCTYGDKFDD-SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
Y +K +D +L M +G RP++ T S+L +C + L R +H I G
Sbjct: 129 SA--YSNKLNDKALKCLILMFREGVRPNMFTYSSVLRAC---DGLPNLRQLHCGIIKTGL 183
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ DV V + LI +YSK D+D+A +FD M R V W ++I G+AQ D +EAL LF
Sbjct: 184 ESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKR 243
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M+ AG + D T+ S++ C LELG+ + ++++ NALIDMY KCGS
Sbjct: 244 MKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGS 301
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ DA F + EK V+SW+TM+AG A NG +AL+LF M E RPN +T L VL A
Sbjct: 302 LEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFA 361
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
C+HAG +EKGW YF M K++ V+P HY C+ DLLGR G+L EA+ + M + D+
Sbjct: 362 CSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSV 421
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
W TLL AC++HRN+++ Y A ++ ELEP A Y+ ++NIYA RW+ VA +R M
Sbjct: 422 TWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMT 481
Query: 590 RNQVKKFPGQSLVHINGKTCTFTVED 615
++K PG S + ++ + F + D
Sbjct: 482 NRGIRKTPGCSWIEVDKQIHVFILGD 507
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 217/422 (51%), Gaps = 10/422 (2%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
H+A+ M+++ + + +T+ + K C+ + +H HI + +FV T+
Sbjct: 37 HRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTL 96
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
++MY K + L+ A LFD+MP+R+V SW MI ++ + + CL R G++ +
Sbjct: 97 LNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFR-EGVRPNM 155
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
T + +A L L+ +H I G+++DV V + I Y+K +DL A VF
Sbjct: 156 FTYSSVLRA---CDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFD- 211
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
E R +V WNSIIGG +++LN ++ M GF D T+ S+L +C L
Sbjct: 212 -EMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLE 270
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
GR VH H + FD D+ + N LI MY KCG ++ A F M ++ +SW+ M++G A
Sbjct: 271 LGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 394
Q G +AL LF +M+ +G P+ +TVL ++ C +G +E G +F + G+
Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGR 388
Query: 395 MVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
LID+ + G + +A +L + + E V+W T++ C ++ A+ +++E
Sbjct: 389 EHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE 448
Query: 454 LD 455
L+
Sbjct: 449 LE 450
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 165/340 (48%), Gaps = 19/340 (5%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
P N + ++ I+ +++++ ++A K L+L M + + PN T+ + +AC L
Sbjct: 117 PERNVVSWTTMISAYSNKL-----NDKALKCLIL---MFREGVRPNMFTYSSVLRACDGL 168
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ + +H I+K+ SD+FV++ ++D+Y+K LD A +FD+MP RD+ WN++I
Sbjct: 169 PNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII 225
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-GV 186
GFAQ + L LF M+ G AD T+ + +A L L + VH +H+
Sbjct: 226 GGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVH---VHVLKF 282
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D D+ + N I Y KC L+ A F + E + V+SW++++ G +L +
Sbjct: 283 DQDLILNNALIDMYCKCGSLEDANSAFSRMVE--KDVISWSTMVAGLAQNGYSRQALELF 340
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSK 305
M G RP+ TV+ +L +C + +G S +G D LI + +
Sbjct: 341 ESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGR 400
Query: 306 CGDIDSARFLFDGM-CDRTRVSWTAMISGYAQKGDLDEAL 344
G +D A L M C+ V+W ++ ++D A+
Sbjct: 401 AGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAI 440
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 280/511 (54%), Gaps = 6/511 (1%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAA 165
AY +F DV +WN+M+ F + L + M R + F T L +
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRF-TFPSLLKGC 89
Query: 166 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
+ K +H + + +D+ + T ++ YA C DLK A +F + G R V
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM--GHRNKVV 147
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
W S+I G +++L Y+ M DGF PD T+ +L+S+C + L G +HSH
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
+ + + L++MY+KCGD+ +AR +FD + D+ +W+A+I GY + EAL+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 346 LFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
LF + + P+ VT+L++IS C Q G LE G+W +Y +V + N+LIDM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKCG I A+ +F ++ K ++SW +M+ G AL+G EAL FH M DL+P+ +TF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFI 387
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
VL AC+HAG +++G F + +Y V + HY CM DLL R G L EA +F++ MP+
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ D IWG++L AC+++ N+E+GE A L ELEP + Y+ ++NIYA W+ V +
Sbjct: 448 QPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKV 507
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R +M ++K PG S V I+ +F D
Sbjct: 508 RELMNEKGIQKTPGCSSVVIDNIAHSFLAGD 538
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 224/424 (52%), Gaps = 18/424 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS +R V+ N +AL + M +++ P+ TFP + K CA L +F +++HG +
Sbjct: 46 WNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQV 105
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK SD++++TT+++MYA C L A LF++M R+ W +MI G+ + + L
Sbjct: 106 VKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEAL 165
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC----NTW 196
L+ M G D VT+ L A K L + +HS HI + D+ +C +
Sbjct: 166 LLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS---HIR-EMDMKICAVLGSAL 221
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFR 255
++ YAKC DLK A VF + + + V +W+++I G ++ ++L +R + R
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSD--KDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMR 279
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T+++++S+C L GR VH + VS+ N+LI M+SKCGDID+A+ +
Sbjct: 280 PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRI 339
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD M + +SW +M++G A G EAL F M+ PD +T + +++ C +G +
Sbjct: 340 FDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLV 399
Query: 376 ELGK--WFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
+ GK +++ A G LK C ++D+ + G + +ARE +P + W +M
Sbjct: 400 QEGKKLFYEIEALYGVRLKSEHYGC--MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSM 457
Query: 432 IAGC 435
+ C
Sbjct: 458 LGAC 461
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/587 (33%), Positives = 297/587 (50%), Gaps = 49/587 (8%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H VK+ + ++ +Y K +D A KLFD++P R+ +W +I GF++ G
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E V LF MR G + T+ L + +L L K VH++ + G+DADV + N+
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y KC + AE VF + EG VVSWN +I + SL+ +R + Y
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEG--DVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVV 488
Query: 256 PDVTTVVSLLSSCVCPEALVQ-------------------------------GRLVHSHG 284
T V L+ +AL Q GR +H
Sbjct: 489 SWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMV 548
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSAR---------FLFDG----MCDRTR---VSWT 328
+ +GF D + ++L+ MY KCG +D+A FL +G C + VSW
Sbjct: 549 LKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWG 608
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
M+SGY G ++ L+ F M V D+ TV ++IS C +G LE G+ Y
Sbjct: 609 LMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKI 668
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
G + + V ++LIDMYSK GS+ DA +F E +V WT+MI+GCAL+G+ +A+ LF
Sbjct: 669 GHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLF 728
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
+M+ + PN VTFL VL AC HAG LE+G YF +M Y +NP + H + M DL GR
Sbjct: 729 EEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGR 788
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEM 568
G L E +F+ I +W + L +C++H+N+E+G++V+ L ++ P YV +
Sbjct: 789 AGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLL 848
Query: 569 ANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+N+ A RWD A +R++M + +KK PGQS + + + TF + D
Sbjct: 849 SNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGD 895
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 203/449 (45%), Gaps = 55/449 (12%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
LFR M+ PN T + K C+ + + +H ++++ +D+ + +++D+Y
Sbjct: 377 LFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYL 436
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLF----------------- 143
KC + A ++F+ M + DV SWN MI + + G +EK L +F
Sbjct: 437 KCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDG 496
Query: 144 --------------YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
Y M G + VT + + L + +H + G D
Sbjct: 497 LMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRD 556
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGI--------------EEGLRTVVSWNSIIGGCTY 235
+ ++ + Y KC + A +V + + +E +VSW ++ G +
Sbjct: 557 GFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVW 616
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
K++D L +R M+ + D+ TV +++S+C L GR VH++ G +D V
Sbjct: 617 NGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYV 676
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
++LI MYSK G +D A +F + V WT+MISG A G +A+ LF M G
Sbjct: 677 GSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGI 736
Query: 356 VPDLVTVLSMISGCGQSGALELG-KWF----DNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+P+ VT L +++ C +G LE G ++F D Y + G++ C +++D+Y + G +
Sbjct: 737 IPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEH----CTSMVDLYGRAGHL 792
Query: 411 GDARELFYALPEKTVVS-WTTMIAGCALN 438
+ + + + S W + ++ C L+
Sbjct: 793 TETKNFIFENGISHLTSVWKSFLSSCRLH 821
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 150/373 (40%), Gaps = 51/373 (13%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNN------LTFPFIAK 62
R+ ++ + WN I + + K+L +FRR+ D+ N + F + +
Sbjct: 446 RVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQ 505
Query: 63 ACAKL-------SDFL------------------YSQMIHGHIVKSPFWSDIFVQTTMVD 97
A +L ++F + +HG ++K F D F+++++V+
Sbjct: 506 ALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVE 565
Query: 98 MYAKCDRLDCAYKLFDKMP----------------DRDVASWNAMIVGFAQMGFLEKVLC 141
MY KC R+D A + +P + SW M+ G+ G E L
Sbjct: 566 MYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLK 625
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + D TV + A +A L + VH++ IG D V ++ I Y+
Sbjct: 626 TFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYS 685
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A +FR E +V W S+I GC + ++ + M+ G P+ T
Sbjct: 686 KSGSLDDAWTIFRQTNE--PNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTF 743
Query: 262 VSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DSARFLFDGM 319
+ +L++C L +G R Y + V +++ +Y + G + ++ F+F+
Sbjct: 744 LGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENG 803
Query: 320 CDRTRVSWTAMIS 332
W + +S
Sbjct: 804 ISHLTSVWKSFLS 816
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W + V + L FR M + + + T I ACA + + +H
Sbjct: 604 IVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHA 663
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ K D +V ++++DMY+K LD A+ +F + + ++ W +MI G A G ++
Sbjct: 664 YNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQ 723
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDADVS 191
+CLF M GI + VT +G+ A HA ++ ++K + ++ V
Sbjct: 724 AICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYC------INPGVE 777
Query: 192 VCNTWISAYAKCNDL-KMAELVFRGIEEGLRTVVS-WNSIIGGC 233
C + + Y + L + +F E G+ + S W S + C
Sbjct: 778 HCTSMVDLYGRAGHLTETKNFIF---ENGISHLTSVWKSFLSSC 818
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 200/628 (31%), Positives = 331/628 (52%), Gaps = 31/628 (4%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKAC-- 64
PR +K + WN+ I + A +AL LFR M ++ P N++TF + +C
Sbjct: 203 PRASK----RDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVE 258
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF----DKMPDRDV 120
A L + IHG IV + + FV+T +VD Y K LD A+++F D+ P +
Sbjct: 259 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSL 318
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
+ +AMI Q G+ ++ L LF+ M L G + VT++ + ++A + + S +F
Sbjct: 319 VTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSV----LNACSMLQVGSATAF 374
Query: 181 GIH-----IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+ + D + T ++ YA+ NDL A F I+ VVSWN++
Sbjct: 375 VLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSP--DVVSWNAMAAAYLQ 432
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC--PE-ALVQGRLVHSHGIHYGFDLD 292
+ ++L + M+ +G RP V T ++ L++C P+ A G+ + S G + D
Sbjct: 433 HHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGD 492
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAM 350
+V N ++MY+KCG + AR +F+ + R ++W +M++ Y G EA LF AM
Sbjct: 493 TAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAM 552
Query: 351 EAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
EA V P+ VT ++++ ++ G+ S G + + ++ NAL++MY+KCGS
Sbjct: 553 EAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGS 612
Query: 410 IGDARELF--YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ DA+ +F + ++ V++WT++IAG A G+ AL LF M + +RPN VTF++ L
Sbjct: 613 LDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISAL 672
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC H G LE+G + MT + + P H+SC+ DLLGR G+L EA ++ ++D
Sbjct: 673 TACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QAD 731
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTM 587
W LL ACK + +E GE A R+ +L+P A+ Y+ +A++YA GRW+ A +R
Sbjct: 732 VITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKT 791
Query: 588 MKRNQVKKFPGQSLVHINGKTCTFTVED 615
M ++ PG S V +N + +F+ D
Sbjct: 792 MLDKGIRADPGCSAVEVNQELHSFSAGD 819
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 235/492 (47%), Gaps = 24/492 (4%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
A +L R +Y + + IR ++ KA+ LF RM ++ PN +
Sbjct: 99 AEALADRFASVYSCTAM------IRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVN 149
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP---DRD 119
AC+ L + + IH I F + + ++ MY+KC L A + FD++P RD
Sbjct: 150 ACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRD 209
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI-QADFVTVMGLTQAAIHAKHLSL--LKS 176
V +WNAMI F + G + L LF +M G + VT + + + + A LSL +++
Sbjct: 210 VVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRA 269
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--RGIEEGLRTVVSWNSIIGGCT 234
+H + G++ + V + +Y K L A VF +G EE ++V+ +++I C
Sbjct: 270 IHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACW 329
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDV 293
+SL + M +G +P T+VS+L++C + V + D
Sbjct: 330 QNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDN 389
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ TL++ Y++ D+ AR FD + VSW AM + Y Q EAL LF M
Sbjct: 390 VLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLE 449
Query: 354 GEVPDLVTVLSMISGCGQ---SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
G P + T ++ ++ C A +GK + GL+ + V NA ++MY+KCGS+
Sbjct: 450 GVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSL 509
Query: 411 GDARELFYAL--PEKTVVSWTTMIAGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVL 467
DAR +F + + ++W +M+A +G EA +LF M E ++PN+VTF+AVL
Sbjct: 510 ADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVL 569
Query: 468 QACTHAGFLEKG 479
A T + +G
Sbjct: 570 DASTSRTSIAQG 581
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 202/432 (46%), Gaps = 28/432 (6%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIV--KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD 113
T+ + +AC +L Q +H HI+ + + F+ + ++ M+AKC L A L D
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
+ V S AMI + + G +K + LF M ++ + ++ L A +L+
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAA 159
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF-RGIEEGLRTVVSWNSIIGG 232
+ +HS + + + N IS Y+KC L A+ F R R VV+WN++I
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219
Query: 233 CTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEA----LVQGRLVHSHGIHY 287
++L +R M DG P+ T VS+L SCV EA L R +H +
Sbjct: 220 FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCV--EAGLLSLEDVRAIHGRIVGA 277
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLF----DGMCDRTRVSWTAMISGYAQKGDLDEA 343
G + + V L+ Y K G +D A +F D + V+ +AMIS Q G E+
Sbjct: 278 GIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQES 337
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGC-----GQSGALELGKWFDNYACSGGLKDNVMVCN 398
LRLFFAM G P VT++S+++ C G + A L + + + + +DNV+
Sbjct: 338 LRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT---RDNVL-GT 393
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
L+ Y++ + AR F A+ VVSW M A + EAL LF +M+ +RP
Sbjct: 394 TLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRP 453
Query: 459 NRVTFLAVLQAC 470
+ TF+ L AC
Sbjct: 454 SVATFITALTAC 465
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I +AKC +L AE + + +V S ++I + D ++ + M RP
Sbjct: 87 IVMHAKCGNLAEAE----ALADRFASVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRP 139
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ +++L+++C C L GR +HS F+ + + N LISMYSKCG + A+ F
Sbjct: 140 NCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAF 199
Query: 317 DGM---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGCGQS 372
D + R V+W AMIS + + G EAL+LF M+ G P+ VT +S++ C ++
Sbjct: 200 DRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEA 259
Query: 373 GALELG--KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY----ALPEKTVV 426
G L L + G++ V AL+D Y K GS+ DA E+F P ++V
Sbjct: 260 GLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLV 319
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+ + MI+ C NG E+L LF M +P+ VT ++VL AC+
Sbjct: 320 TCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS 364
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 118/219 (53%), Gaps = 11/219 (5%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVS--VINTLISMYSKCGDIDSARFLFDGMCD 321
LL +C AL QG+ +H+H + DL + + LI M++KCG++ A L D
Sbjct: 49 LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA- 107
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ S TAMI + + G D+A+ LF ME P+ ++++++ C G L G+
Sbjct: 108 -SVYSCTAMIRAWMEHGRPDKAMELFDRMEVR---PNCHALIALVNACSCLGNLAAGRRI 163
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP---EKTVVSWTTMIAGCALN 438
+ ++N ++ NALI MYSKCGS+ DA++ F LP ++ VV+W MI+ N
Sbjct: 164 HSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRN 223
Query: 439 GEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFL 476
G EAL LF M + PN VTF++VL +C AG L
Sbjct: 224 GSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLL 262
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/599 (32%), Positives = 314/599 (52%), Gaps = 8/599 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ WNS + + + AL FR M + I P+ +F A A+ ++H
Sbjct: 82 VASWNS-LLNPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVH 140
Query: 78 GHIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
K P S ++FV T +++MY K + A +FD+MP R+ SW AM+ G+A
Sbjct: 141 ALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCS 200
Query: 137 EKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ LF M + +FV L+ ++ L + VH + G+ VSV N
Sbjct: 201 QEAFELFRQMLGECPLHKNEFVATAVLSAISVPLG-LPMGVQVHGLVVKDGMVGFVSVEN 259
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ ++ YAK + A VF +E R ++W+++I G + + ++ + M GF
Sbjct: 260 SLVTMYAKAGCMDAAFHVFESSKE--RNSITWSAMITGYSQNGNAESAVRMFSQMHAAGF 317
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P T+V +L++C L++G+ H + GF++ V V + L+ MY+KCG I A+
Sbjct: 318 PPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKE 377
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F+ + V WTAM++G+ Q G+ ++AL L+ M+ G P+ +T+ S++ C A
Sbjct: 378 CFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAA 437
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LE GK G V +AL MYSKCG++ D +F +P + V++W ++I+G
Sbjct: 438 LEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISG 497
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
+ NG +A++LF +M P+ VTF+ VL AC+H G +++GW YF M K Y + P
Sbjct: 498 FSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTP 557
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
L+HY+CM D+L R G L EA DF++S+ I +W +L AC+ R+ ++G Y +L
Sbjct: 558 RLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKL 617
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+L +A Y+ ++NIYA +W+ V +R +MK V K PG S V +N + F V
Sbjct: 618 MDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVV 676
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 227/470 (48%), Gaps = 14/470 (2%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRL--DCAYKLFDKMPD--RDVASWNAMIVG 129
+ +H +KS S V +++ Y+ RL A+ +F +P RDVASWN+++
Sbjct: 32 EALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLNP 91
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-GVDA 188
+ L + + I + AA A S VH+ + +
Sbjct: 92 LSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASS 151
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+V V ++ Y K + A+LVF E R VSW +++ G ++ +R
Sbjct: 152 NVFVSTALLNMYCKLGLIPDAQLVFD--EMPHRNEVSWAAMVAGYAARKCSQEAFELFRQ 209
Query: 249 MIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ + + ++LS+ P L G VH + G VSV N+L++MY+K G
Sbjct: 210 MLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAG 269
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+D+A +F+ +R ++W+AMI+GY+Q G+ + A+R+F M AAG P T++ +++
Sbjct: 270 CMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLN 329
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C G L GK G + V V +AL+DMY+KCG IGDA+E F E +V
Sbjct: 330 ACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVL 389
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT M+ G NGEF +AL L+ +M + + PN +T ++L+AC LE G L T
Sbjct: 390 WTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGK---QLHT 446
Query: 488 KVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ + L S ++ + + G L++ + + MP + D W +++
Sbjct: 447 QILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHR-DVIAWNSII 495
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 18/323 (5%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARFLFDGMCDRTR--VSWTAMIS 332
G +H+ + G V N+LI+ YS + +A +F + R SW ++++
Sbjct: 31 GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90
Query: 333 GYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACS-GGL 390
+ L AL F +M ++ + P + + + ++ + G AC
Sbjct: 91 PLSHHRPL-AALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSA 149
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
NV V AL++MY K G I DA+ +F +P + VSW M+AG A EA +LF Q
Sbjct: 150 SSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQ 209
Query: 451 MM-ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
M+ E L N AVL A + L G L+ K V ++ + + + +
Sbjct: 210 MLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVG-FVSVENSLVTMYAKA 268
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G + A +S + ++ W ++ + N E A R+F + P E
Sbjct: 269 GCMDAAFHVFESSK-ERNSITWSAMITGYSQNGNAE----SAVRMFSQMHAAGFPPTE-- 321
Query: 570 NIYALGGRWDGVANLRTMMKRNQ 592
+ L G + +++ T+M+ Q
Sbjct: 322 --FTLVGVLNACSDVGTLMEGKQ 342
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 274/528 (51%), Gaps = 10/528 (1%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
TT++ L A +FD+MPDRDV +W AM+ G+A G L LF M G+
Sbjct: 7 TTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVG 66
Query: 153 ADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND---LK 207
+ T+ + A A S+H+ + GVD V N I AYA C + ++
Sbjct: 67 PNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVE 126
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
+ +F + G RT SW S++ G + + L ++ MI DG T L +
Sbjct: 127 ESRKLFDALGSG-RTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHA 185
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C L G+ +H + F+ +++V N+LI MY C ++ AR LFD + +R V+W
Sbjct: 186 CASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTW 245
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
MI+ Y+Q L AL+L M P+ T+ S+ S C +L G+ A
Sbjct: 246 NTMIAWYSQCNHL-MALQLLREMNLQ---PNCFTLTSITSACAGLASLRFGQQVHGAALR 301
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
++ +CNAL+DMYSKCGSI +A+++F + K +SWT+MI G +NG E++ L
Sbjct: 302 RNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQL 361
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F M+ + P+ V FL ++ AC H G +++GW +F MT Y + P Y C+ +LL
Sbjct: 362 FTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLA 421
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
R G+L+EA D + MP D +WG LL ACK+H+N+E+G A ++ E+ P A YV
Sbjct: 422 RAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDRAKTYVL 481
Query: 568 MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ANIYA G +W A+ R +++ +K G S + + K +FT D
Sbjct: 482 LANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTAD 529
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 220/456 (48%), Gaps = 23/456 (5%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKAC--AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
AL LFRRM + PN T + AC +H V+ +V +
Sbjct: 53 ALDLFRRMLAAGVGPNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNAL 112
Query: 96 VDMYAKCDR---LDCAYKLFDKM-PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI 151
++ YA C+ ++ + KLFD + R ASW +M+ G+++ G + L LF M GI
Sbjct: 113 IEAYASCEEGVGVEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGI 172
Query: 152 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
+ T A +L + + +H + +A+++V N+ I Y C +L A
Sbjct: 173 ELSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARR 232
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
+F I E R +V+WN++I + + +L R M +P+ T+ S+ S+C
Sbjct: 233 LFDEIPE--RNLVTWNTMIAWYSQCNHL-MALQLLREM---NLQPNCFTLTSITSACAGL 286
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+L G+ VH + + D+ + N L+ MYSKCG I +A+ +F+ M + ++SWT+MI
Sbjct: 287 ASLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMI 346
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGL 390
+GY G +E+++LF +M AG PD V L +I C G ++ G +F + L
Sbjct: 347 TGYGMNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNL 406
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIAGCALNGEFVEALDL 447
+ N + + ++ ++ G + +A +L + + P++TV W ++ C ++ + VE L
Sbjct: 407 QPNKEIYGCVTNLLARAGRLREAFDLIHRMPFAPDETV--WGALLGACKMH-KNVELGRL 463
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
+ + +++ P+R +L AG WG +
Sbjct: 464 AARKI-IEINPDRAKTYVLLANIYAAG---NKWGEY 495
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T W S + + L LF+ M ++ IE + T ACA +++ Q +H
Sbjct: 140 TAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLH 199
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
++ F +++ V +++DMY C L A +LFD++P+R++ +WN MI ++Q L
Sbjct: 200 VLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCNHLM 259
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L R + +Q + T+ +T A L + VH + D+ +CN +
Sbjct: 260 ALQLL----REMNLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNALV 315
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KC + A+ +F ++ + +SW S+I G ++S+ + MI+ G PD
Sbjct: 316 DMYSKCGSIANAKKMFNMMD--YKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHPD 373
Query: 258 VTTVVSLLSSC 268
+ L+ +C
Sbjct: 374 HVVFLGLICAC 384
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I N AL L R M +++PN T I ACA L+ + Q +HG +
Sbjct: 245 WNTMIAWYSQCNHL-MALQLLREM---NLQPNCFTLTSITSACAGLASLRFGQQVHGAAL 300
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + D+ + +VDMY+KC + A K+F+ M +D SW +MI G+ G+ + +
Sbjct: 301 RRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQ 360
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIH 167
LF +M G+ D V +GL A H
Sbjct: 361 LFTSMIHAGVHPDHVVFLGLICACNH 386
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 294/562 (52%), Gaps = 23/562 (4%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK--------CDRLDCAYKLFD 113
K C L F + IH +V S D FV + +++ +A CD L+
Sbjct: 13 KDCKNLRIF---RQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRLG 69
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
P +N++I G+ F + + ++ M G D T L +A +
Sbjct: 70 SFP------FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE 123
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ VH + +G+ AD V N+ I Y C D A VF E +R VVSWNS+I G
Sbjct: 124 GRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFD--EMLVRDVVSWNSLISGF 181
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
FD++++ + M P +TT+VS+L++C L G+ +H I F +++
Sbjct: 182 MKAGHFDEAISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNL 237
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
+ N ++ MY K G A+ +FD + R VSWT MI+G Q ++L LF M
Sbjct: 238 VLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTL 297
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G PD + + S++S C G L+ G W Y G+K ++ + A++DMY+KCG I A
Sbjct: 298 GISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMA 357
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
++FY++ ++ +W ++ G A++G EAL+LF M+ ++PN +TFLA+L AC H
Sbjct: 358 LKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHC 417
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G +++G YF+ M+K+Y + P+L HY CM DL R G L+EA++ ++MP+K D IWG
Sbjct: 418 GLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGL 477
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL AC NIE+ + + EL+ + +V ++NI A+ RW V LR +MK V
Sbjct: 478 LLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGV 537
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
+K PG S++ ++GK F V D
Sbjct: 538 RKAPGSSVIEVDGKAHEFVVGD 559
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 209/436 (47%), Gaps = 8/436 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS I V A+ ++RRM ++ P+ TFP + KAC+ S + +HG +V
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K +D +VQ +++ Y C CA K+FD+M RDV SWN++I GF + G ++ +
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F+ M ++ T++ + A L K +H I ++ + N + Y
Sbjct: 193 VFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGV-IERRFKVNLVLGNAMLDMYV 248
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K A+ +F E R +VSW +I G D SL + M G PD +
Sbjct: 249 KNGCFYEAKNIFD--ELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIIL 306
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C L G VH + G D+ + ++ MY+KCG I+ A +F M
Sbjct: 307 TSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQ 366
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
R +W A++ G A G + EAL LF M +G P+ +T L++++ C G ++ G K+
Sbjct: 367 RNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKY 426
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNG 439
FDN + L + +ID++ + G + +A EL +P K V+ W ++ C G
Sbjct: 427 FDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVG 486
Query: 440 EFVEALDLFHQMMELD 455
+ + ++ELD
Sbjct: 487 NIELSHRIQDYILELD 502
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W I V + ++L LF M+ I P+ + + ACA L + +H
Sbjct: 268 IVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 327
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+I + DI + T +VDMYAKC ++ A K+F M R+ +WNA++ G A G + +
Sbjct: 328 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHE 387
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
L LF M + G++ + +T + + A H
Sbjct: 388 ALNLFEVMIISGVKPNEITFLAILTACCH 416
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 297/562 (52%), Gaps = 34/562 (6%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCD-RLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H + + S ++ + + ++ YA L A+K+FD++ WN +I G AQ
Sbjct: 5 KRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ 64
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ + + G+ D +T + +A L+ + +H+ +G+ +D+ V
Sbjct: 65 SDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFV 124
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ I YA C +L A VF E ++ VVSWNS+I G + ++F D L ++ M +
Sbjct: 125 SNSLIHLYAACGNLCYARSVFD--EMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNE 182
Query: 253 GFRPDVTTVVSLLSSCV------------------CPEALV------------QGRLVHS 282
G + D T++ ++S+C C E V +G+L +
Sbjct: 183 GVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSA 242
Query: 283 HGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ + + ++ +N +I+ Y+K DI SAR +FD + + +SW++MISGY+Q
Sbjct: 243 EKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFS 302
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
+AL +F M+ A PD + + S++S C GAL+LGKW Y +K + ++ N+LI
Sbjct: 303 DALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLI 362
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY KCGS +A ++F + EK +SW ++I G A NG E+L+LF M+ RPN V
Sbjct: 363 DMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGV 422
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TFL VL AC +A +E+G +F M ++Y + P++ HY C+ DLLGR G+L++AL F+
Sbjct: 423 TFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITE 482
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MPI D +W LL +C H ++ I E V +L ELEP ++ Y ++N YA RW
Sbjct: 483 MPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEA 542
Query: 582 ANLRTMMKRNQVKKFPGQSLVH 603
N+R M V+K PG S V
Sbjct: 543 MNVRQCMADTDVRKSPGCSAVE 564
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 223/467 (47%), Gaps = 35/467 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + A+ +++ + + P+NLTFPFI KACA+++ + +H HI
Sbjct: 55 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 114
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K SDIFV +++ +YA C L A +FD+M +DV SWN++I G++Q + +L
Sbjct: 115 KLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILA 174
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIGV----------- 186
LF M+ G++AD VT++ + A S +++ + + I + V
Sbjct: 175 LFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFG 234
Query: 187 ----------------DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
++ N I+AYAK D+ A +F I + + ++SW+S+I
Sbjct: 235 RRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPK--KDLISWSSMI 292
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + + F D+L +R M +PD + S++SSC AL G+ VH +
Sbjct: 293 SGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIK 352
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D + N+LI MY KCG A +F M ++ +SW ++I G A G E+L LF AM
Sbjct: 353 ADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAM 412
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
G P+ VT L ++ C + +E G F++ L+ + ++D+ + G
Sbjct: 413 LTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQ 472
Query: 410 IGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ A +P + V W ++ C +G+ A + ++ EL+
Sbjct: 473 LEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELE 519
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 307/601 (51%), Gaps = 11/601 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + V A L R M + + ++ A + V
Sbjct: 59 WNSLLAAHVAAGAHRDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSV 118
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ ++F + ++D+YAKC RL A ++FD MP R++ SWNA+I G+ + +
Sbjct: 119 RCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAME 178
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M+ VG D T L + SL++ +H + G + N I+AY+
Sbjct: 179 LFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYS 238
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY-RHMIYDGFRPDVTT 260
+C+ L + +F GIE R ++SWNS++G Y D+++ F+ R M G +PD+ +
Sbjct: 239 QCDALADSRKIFDGIES--RDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYS 296
Query: 261 VVSLLSSCV---CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD---IDSARF 314
S +S C C + QGR +HS I +G + V N +I+MY++ D ++ A
Sbjct: 297 FTSAISVCSEHGCDDQ--QGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYN 354
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
F + + VSW +M++GY+ G +AL+ F M A D + + + C
Sbjct: 355 CFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAV 414
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L LG+ + G N V ++LI MYSKCG +GDAR+ F + + V W +M+ G
Sbjct: 415 LRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFG 474
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A +G+ DLF++M++L++ + VTF+A++ A +H G +++G N M Y++
Sbjct: 475 YAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPM 534
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HY+C DL GR G+L +A + ++SMP + DA +W TLL AC+IH N+E+ VA L
Sbjct: 535 RMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHL 594
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
F EP + YV ++++Y+ G W A ++ +M+ + K PG S + + + +F +
Sbjct: 595 FVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIEVKNEVHSFNAD 654
Query: 615 D 615
D
Sbjct: 655 D 655
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 226/501 (45%), Gaps = 21/501 (4%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
L A ++FD++P D ASWN+++ G L M G+ A + ++
Sbjct: 41 LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLAASTFALGSALRS 100
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
A A+ L + SF + G+ +V + + YAKC L A VF G+ +R +V
Sbjct: 101 AAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMP--VRNIV 158
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SWN+II G T K +++ + M G PD TT LL++ P R +H
Sbjct: 159 SWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKI 218
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ YG L + +N I+ YS+C + +R +FDG+ R +SW +M+ YA G DEA+
Sbjct: 219 VKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAM 278
Query: 345 RLFFA-MEAAGEVPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNALID 402
R F M +G PD+ + S IS C + G + G+ + GL+ VCNA+I
Sbjct: 279 RFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIA 338
Query: 403 MYSKCGS---IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
MY++ + DA F +L K VSW +M+ G + +G +AL F M ++R +
Sbjct: 339 MYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTD 398
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM-----ADLLGRKGKLKE 514
A L++C+ L G +L+ + + + S + +LG K E
Sbjct: 399 EFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFE 458
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE-PHSAAPYVEMANIYA 573
D S+P W +++ H + + + +LE P +V + Y+
Sbjct: 459 EADKSSSVP-------WNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYS 511
Query: 574 LGGRWD-GVANLRTMMKRNQV 593
GG D G L TM R ++
Sbjct: 512 HGGLVDEGSEILNTMETRYKI 532
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 226/523 (43%), Gaps = 49/523 (9%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I D + +A+ LF M++ P+ TF + A + + +HG
Sbjct: 157 IVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHG 216
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
IVK + + Y++CD L + K+FD + RD+ SWN+M+ +A G ++
Sbjct: 217 KIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDE 276
Query: 139 VLCLFYN-MRLVGIQADFVT-VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ F MR GIQ D + ++ + H +S+HS I G++ VCN
Sbjct: 277 AMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAM 336
Query: 197 ISAYAKCNDLKMAELVFRGIEE-GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I+ Y + D M E + + VSWNS++ G ++ D+L F+R M + R
Sbjct: 337 IAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIR 396
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D + + L SC L GR VHS + GF + V ++LI MYSKCG + AR
Sbjct: 397 TDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKS 456
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGA 374
F+ + V W +M+ GYAQ G LF M EVP D VT +++I+ G
Sbjct: 457 FEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDL-EVPLDHVTFVALITAYSHGGL 515
Query: 375 LELGK--------------WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
++ G ++YAC +D+Y + G + A+EL ++
Sbjct: 516 VDEGSEILNTMETRYKIPMRMEHYACG-------------VDLYGRAGQLDKAKELIESM 562
Query: 421 P-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL--------------A 465
P + + W T++ C ++G A D+ + + R + L A
Sbjct: 563 PFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRA 622
Query: 466 VLQACTHAGFLEK--GWGYFNLMTKVYQVNPELNHYSCMADLL 506
+Q L K GW + + +V+ N + + M ++
Sbjct: 623 TVQKVMRNRALSKIPGWSWIEVKNEVHSFNADDRSHPRMVEIF 665
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 153/352 (43%), Gaps = 8/352 (2%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N ++AY+ L A VF I SWNS++ D+ R M G
Sbjct: 30 NQLLTAYS-ATGLAAARRVFDEIPHP--DAASWNSLLAAHVAAGAHRDAWRLLRAMHARG 86
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+ S L S G + S + G +V + L+ +Y+KCG + AR
Sbjct: 87 LAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDAR 146
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+FDGM R VSW A+I+GY EA+ LF M+ G VPD T +++
Sbjct: 147 RVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPR 206
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
L + G ++ NA I YS+C ++ D+R++F + + ++SW +M+
Sbjct: 207 WYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLG 266
Query: 434 GCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGF-LEKGWGYFNLMTK--V 489
A +G EA+ F +MM E ++P+ +F + + C+ G ++G +L+ K +
Sbjct: 267 AYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGL 326
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
V P N M +++A + S+ K DA W ++L H
Sbjct: 327 EGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFK-DAVSWNSMLTGYSHH 377
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/548 (33%), Positives = 290/548 (52%), Gaps = 39/548 (7%)
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D A +F + + + WN M+ G+A L L+ M +G+ + T L
Sbjct: 14 DGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLL 73
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--------- 213
++ +K + +H + +G + D+ V + IS YA+ L+ A VF
Sbjct: 74 KSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVV 133
Query: 214 ---------------RGIEE-----GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
R +E ++ VVSWN++I G + ++L ++ M+
Sbjct: 134 SYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN 193
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
RPD T+V++LS+C ++ GR VHS +GF ++ ++N LI +YSKCG +++A
Sbjct: 194 VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETAC 253
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LF+G+ + VSW +I GY EAL LF M +GE P+ VT++S++ C G
Sbjct: 254 GLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLG 313
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNA------LIDMYSKCGSIGDARELFYALPEKTVVS 427
A+++G+W Y LKD V NA LIDMY+KCG I A ++F ++ K++ S
Sbjct: 314 AIDIGRWIHVY-IDKKLKD---VTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 369
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
W MI G A++G DLF +M + + P+ +TF+ +L AC+H+G L+ G F MT
Sbjct: 370 WNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMT 429
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ Y + P+L HY CM DLLG G KEA + +++MP++ D IW +LL AC+ H N+E+
Sbjct: 430 QDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELA 489
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
E A L ++EP + YV ++NIYA G WD VA +R ++ +KK PG S + I+ +
Sbjct: 490 ESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSE 549
Query: 608 TCTFTVED 615
F V D
Sbjct: 550 VHEFIVGD 557
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 240/469 (51%), Gaps = 37/469 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ +R ++ AL L+ M + PN+ TFPF+ K+CAK F Q IHGH++
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--------------------------- 114
K + D++V T+++ MYA+ RL+ A+K+FD+
Sbjct: 94 KLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQE 153
Query: 115 ----MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+P +DV SWNAMI G+A+ G ++ L LF M ++ D T++ + A ++
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G +++ + N I Y+KC ++ A +F G+ + VVSWN++I
Sbjct: 214 VELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGL--SCKDVVSWNTLI 271
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
GG T+ + + ++L ++ M+ G P+ T+VS+L +C A+ GR +H + D
Sbjct: 272 GGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKD 331
Query: 291 LD--VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
+ S+ +LI MY+KCGDI++A +F+ M ++ SW AMI G+A G + LF
Sbjct: 332 VTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFS 391
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 392 RMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHS 451
Query: 408 GSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
G +A+E+ +P E V W +++ C +G A +M+++
Sbjct: 452 GLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVE 500
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 306/576 (53%), Gaps = 34/576 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVD---MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++IH ++K+ + + + +++ + D L A +F+ + + ++ WN M G
Sbjct: 19 RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A + L+ M +G+ + T L ++ K + +H + +G + D+
Sbjct: 79 ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138
Query: 191 SVCNTWISAYAKCNDLKMAELVFRG---------------------IEEG--------LR 221
V + IS Y K K A VF G IE ++
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSWN+II G ++L+ ++ M+ +PD +T+V+++S+C ++ GR VH
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S +G ++ ++N LI +YSKCG++++A LF G+ ++ +SW MI GY
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYK 318
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNA 399
EAL LF M +GE P+ VT+LS++ C Q GA++ G+W Y G+ + + +
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS 378
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY+KCG I A ++F ++ +T+ + MI G A++G A D+F +M + + P+
Sbjct: 379 LIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TF+ +L AC+H+G L+ G F MT+ Y++ P+L HY CM DLLG G KEA + +
Sbjct: 439 DITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMI 498
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
+M ++ D IW +LL ACK+H N+E+GE A +L ++EP + YV ++NIYA GRW+
Sbjct: 499 NTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWN 558
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VAN+R ++ +KK PG S + I+ F + D
Sbjct: 559 EVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 256/531 (48%), Gaps = 66/531 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R ++ A+ L+ M + PN+ TFPF+ K+CAKL Q IHGH++
Sbjct: 71 WNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVL 130
Query: 82 KSPFWSDIFVQTTMVDMYAKCDR-------------------------------LDCAYK 110
K + D++V T+++ MY K R ++ A K
Sbjct: 131 KLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQK 190
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD++P +DV SWNA+I G+A G ++ L LF M ++ D T++ + A +
Sbjct: 191 MFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS 250
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G+ +++ + N I Y+KC +++ A +F+G+ + V+SWN++I
Sbjct: 251 IQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSN--KDVISWNTMI 308
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY--G 288
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 309 GGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKG 368
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S+ +LI MY+KCGDI++A +F+ M RT + AMI G+A G + A +F
Sbjct: 369 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFS 428
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDM 403
M G PD +T + ++S C SG L+LG+ NY + L+ +ID+
Sbjct: 429 RMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEH----YGCMIDL 484
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
G +A E+ + E V W +++ C ++G VE + F Q + + + P
Sbjct: 485 LGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGN-VELGESFAQKL-IKIEP---- 538
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
+ G + L++ +Y N + + LL KG K
Sbjct: 539 ---------------ENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKK 574
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 39/308 (12%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF---LFDG 318
+SLL +C ++L R++H+ I G ++ L+ + D + +F+
Sbjct: 6 LSLLHNCKTLQSL---RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFET 62
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + + W M G+A D A++L+ M + G +P+ T ++ C + + G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + G + ++ V +LI MY K G DA ++F + VVS+T +I G A
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182
Query: 439 GEF-------------------------------VEALDLFHQMMELDLRPNRVTFLAVL 467
G EALDLF +MM+ +++P+ T + V+
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC +G ++ G + + + + L + + DL + G+++ A Q + K D
Sbjct: 243 SACAQSGSIQLGRQVHSWIDD-HGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK-D 300
Query: 528 AGIWGTLL 535
W T++
Sbjct: 301 VISWNTMI 308
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 279/498 (56%), Gaps = 17/498 (3%)
Query: 126 MIVGFAQMGFLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
MI GF + E + +F +M L G + D TV+ + A + L L + I
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G + VS+ IS ++KC ++++A L+F I + + ++S N++I G T + +DS+
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRK--KDLISCNAMISGFTCNGETEDSVR 118
Query: 245 FYRHMIYDGFRPDVTTVVSLLS-------SCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
++ ++ G R +T+V L+ S +C +H + G SV
Sbjct: 119 LFKELLSSGERVSSSTIVGLIPVYSPFGHSYLC-------NCIHGFCVKLGIVSHSSVST 171
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L ++Y + ++ AR LFD ++T SW AMISG Q G D A+ LF M+ P
Sbjct: 172 ALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNP 231
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+ VTV S++S C Q GAL LG+W + S + NV V ALIDMY+KCGSI ARELF
Sbjct: 232 NPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELF 291
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+PEK V+W MI+G L+G EAL LF+ M+ ++P +TFL+VL AC+HAG ++
Sbjct: 292 DLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVK 351
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+G G F+ M + P HY+CM D+LGR G+LK+AL+F+++MP++ +WG LL A
Sbjct: 352 EGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGA 411
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
C IH++ + + +LFEL+P + YV M+NIY++ ++ A++R + K+ ++ K P
Sbjct: 412 CMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTP 471
Query: 598 GQSLVHINGKTCTFTVED 615
G +L+ I FT D
Sbjct: 472 GCTLIEIGQVPHVFTSGD 489
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 205/436 (47%), Gaps = 25/436 (5%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ A A+L + I +K F+S + + T ++ +++KC ++ A LF ++ +D
Sbjct: 37 VLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKD 96
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
+ S NAMI GF G E + LF + G + T++GL H L +H
Sbjct: 97 LISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHG 156
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
F + +G+ + SV + Y + N++ A +F E +T+ SWN++I GCT
Sbjct: 157 FCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFD--ESAEKTLASWNAMISGCTQNGLT 214
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D +++ ++ M + P+ TV S+LS+C AL G VHS F+ +V V L
Sbjct: 215 DAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTAL 274
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
I MY+KCG I AR LFD M ++ V+W AMISGY G EAL+LF+ M ++ P
Sbjct: 275 IDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTG 334
Query: 360 VTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+T LS++ C +G ++ G F G + ++D+ + G + A E
Sbjct: 335 LTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIK 394
Query: 419 ALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
A+P E W ++ C ++ + A ++ ELD P +
Sbjct: 395 AMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELD--PENI---------------- 436
Query: 478 KGWGYFNLMTKVYQVN 493
GY+ LM+ +Y V
Sbjct: 437 ---GYYVLMSNIYSVE 449
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ WN+ I A+ LF+ M+KN++ PN +T I ACA++ + +H
Sbjct: 197 TLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVH 256
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I + F S+++V T ++DMYAKC + A +LFD MP+++ +WNAMI G+ G +
Sbjct: 257 SLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQ 316
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L LFY+M ++ +T + + A HA
Sbjct: 317 EALKLFYDMLSSSVKPTGLTFLSVLYACSHA 347
>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
Length = 495
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 269/484 (55%), Gaps = 2/484 (0%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
FV ++++MY KC ++ A + F+ M R+V SW+ M+ +AQ G ++ L LF M
Sbjct: 11 FVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEE 70
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
G++ + VT + + A +A+ + + +H +D + V + Y KC+ L A
Sbjct: 71 GVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEA 130
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
VF GI E + VV+W+++I +++ + +M DG RP+ ++S+L +C
Sbjct: 131 RQVFDGIVE--KDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACS 188
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
AL +G++ H + GF DVS NTLI MY KCGD+ SA+ +F GM R +SW+A
Sbjct: 189 SAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSA 248
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
M++ A+ G +A F M+ G PD VT +S++ C GAL G + G
Sbjct: 249 MLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEG 308
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ + + N+LIDMY KCGS+ AR +F + + V++WTTMI C + + EAL+LF
Sbjct: 309 FQSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFE 368
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+M + ++P++V FL+++ +C+H+G +E+G YF M + P + H+ M DLLGR
Sbjct: 369 EMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRS 428
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
GKL EA + ++ MP++ W TLL ACK H + E VA + L P A PYV +
Sbjct: 429 GKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYVSFS 488
Query: 570 NIYA 573
NI +
Sbjct: 489 NILS 492
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 225/420 (53%), Gaps = 12/420 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + + + +AL+LF++M++ +EPN +TF + ACA +MIH
Sbjct: 44 WSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLAA 103
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + V T +V MY KC RL A ++FD + ++DV +W+ MI +AQ+G + + +
Sbjct: 104 RKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQ 163
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M L G++ + + +M + A A L+ K H + G ADVS NT I Y
Sbjct: 164 LFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYG 223
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL A+ VF G+E R ++SW++++ D+ +R M +G +PD T
Sbjct: 224 KCGDLASAKAVFGGMER--RDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTF 281
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
VSLL +C ALV+G ++H+ GF + + N+LI MY KCG + +AR +FD M
Sbjct: 282 VSLLDACSLLGALVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSH 341
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R ++WT MI+ Q EAL LF ME AG PD V LS+I C SG +E G+ +
Sbjct: 342 RNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIY 401
Query: 382 -----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
++ + + G++ V ++D+ + G + +A EL +P E VV W T+++ C
Sbjct: 402 FLKMVEDQSFTPGVEHFV----GMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSAC 457
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 298/545 (54%), Gaps = 8/545 (1%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYA--KCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH ++++ + D F + +V + + L A +F ++P+ + N++I G
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
++ L + M + G+ D T L ++ ++ S K +H +G +D
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTY 121
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY-RHMI 250
NT ++ Y+ C L A VF +E+ +TVVSW ++IG D+ ++++ + R M
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMED--KTVVSWATMIGVHAQWDQPNEAVRLFDRMMK 179
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ +P+ T+V++L++C L + +H + +GF V + L+ +Y KCG +
Sbjct: 180 SENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQ 239
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR LFD ++ SW MI+G+ + + +EAL LF M+ G D VT+ S++ C
Sbjct: 240 LARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACT 299
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
GALELGKW Y + +V + AL+DMY+KCGSI A ++F+ +PEK V++WT
Sbjct: 300 HLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTA 359
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I G A+ G+ AL F +M ++P+ +TF+ VL AC+HAGF+++G +FN M+ Y
Sbjct: 360 LILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTY 419
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P + HY + D+LGR G++ EA + ++SMP+ D + G LL AC+IH N+E E
Sbjct: 420 GIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERA 479
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
A +L E++P+ + YV ++NIY +W+ R +M ++K PG S + ++G
Sbjct: 480 AKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHE 539
Query: 611 FTVED 615
F D
Sbjct: 540 FVKGD 544
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 229/438 (52%), Gaps = 12/438 (2%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
NS IR DKN +ALL ++ M + P+ TFP + K+C S+ + IH H K
Sbjct: 57 NSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTK 113
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
F SD + Q T+++MY+ C L A K+FDKM D+ V SW MI AQ + + L
Sbjct: 114 LGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRL 173
Query: 143 FYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ ++ + VT++ + A A+ L+++K +H + G V + + Y
Sbjct: 174 FDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYC 233
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +++A +F +E + + SWN +I G ++++L +R M G + D T+
Sbjct: 234 KCGCVQLARDLFDKAQE--KNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTM 291
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
SLL +C AL G+ +H++ D+DV++ L+ MY+KCG I++A +F M +
Sbjct: 292 ASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPE 351
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KW 380
+ ++WTA+I G A G + AL+ F M G PD +T + +++ C +G ++ G
Sbjct: 352 KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISH 411
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKTVVSWTTMIAGCAL 437
F++ + + G++ + L+D+ + G I +A EL ++ P++ V+ ++ C +
Sbjct: 412 FNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLG--GLLGACRI 469
Query: 438 NGEFVEALDLFHQMMELD 455
+G A Q++E+D
Sbjct: 470 HGNLEAAERAAKQLLEID 487
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 150/305 (49%), Gaps = 6/305 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
T+ W + I ++ ++A+ LF RM K +++PN +T + ACA+ D + I
Sbjct: 150 TVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRI 209
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +I + F + + T ++D+Y KC + A LFDK ++++ SWN MI G +
Sbjct: 210 HEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNY 269
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E+ L LF M+ GI+ D VT+ L A H L L K +H++ +D DV++
Sbjct: 270 EEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTAL 329
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC ++ A VF + E + V++W ++I G + +++L ++ M G +P
Sbjct: 330 VDMYAKCGSIETAIQVFHEMPE--KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKP 387
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSARF 314
D T V +L++C V + H + + YG + L+ + + G I A
Sbjct: 388 DAITFVGVLAAC-SHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEE 446
Query: 315 LFDGM 319
L M
Sbjct: 447 LIKSM 451
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 267/506 (52%), Gaps = 3/506 (0%)
Query: 111 LFDKMP-DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
+F K P + + +N MI G + L+ +M I D T + +A
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L +HS G D DV V + Y+KC L+ A VF + ++ VVSW +
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMV--VKNVVSWTGM 176
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I GC KF ++++ +R ++ G RPD +V +L +C L GR + G
Sbjct: 177 ICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGL 236
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+V V +L+ MY+KCG ++ ARF+FDGM ++ V W+AMI GYA G EA+ LFF
Sbjct: 237 SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M PD ++ +S C GALELG W N ++ +LID Y+KCGS
Sbjct: 297 MRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGS 356
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ +A ++ + EK V + +I+G A+ G+ A +F QM + + PN TF+ +L
Sbjct: 357 MEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCG 416
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
CTHAG ++ G YFN M+ + V P + HY CM DLL R G L EA + ++ MP+K++
Sbjct: 417 CTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVI 476
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
+WG+LL C++HR ++ E+V +L ELEP ++ YV ++NIY+ RWD +R+ +
Sbjct: 477 VWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVN 536
Query: 590 RNQVKKFPGQSLVHINGKTCTFTVED 615
++K PG S V ++G F V D
Sbjct: 537 EKGMQKLPGYSWVEVDGVVHEFLVGD 562
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 223/448 (49%), Gaps = 4/448 (0%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+K +S +N+ IR V K+ + A+ L+ M K I P++ TF F+ KACA+L+
Sbjct: 60 FHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNL 119
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
F MIH + K+ F D+FV+T +V Y+KC L A+K+FD M ++V SW MI G
Sbjct: 120 FHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICG 179
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ G + + LF + G++ D ++ + +A L + + G+ +
Sbjct: 180 CIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRN 239
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V + + Y KC ++ A VF G+ E + +V W+++I G +++ + M
Sbjct: 240 VFVATSLVDMYTKCGSMEEARFVFDGMVE--KDIVCWSAMIQGYASNGLPREAIELFFEM 297
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
RPD +V LSSC AL G + F + + +LI Y+KCG +
Sbjct: 298 RKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSM 357
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ A ++ M ++ RV + A+ISG A G + A +F M G P+ T + ++ GC
Sbjct: 358 EEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGC 417
Query: 370 GQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVS 427
+G ++ G+ +F++ + + + ++D+ ++ G + +A L +P K V+
Sbjct: 418 THAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIV 477
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELD 455
W +++ GC L+ E A + Q++EL+
Sbjct: 478 WGSLLGGCRLHRETQLAEHVLKQLIELE 505
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 312/580 (53%), Gaps = 15/580 (2%)
Query: 47 KNDIEPNNLTFPFIAKACAKLS----DFLYSQMIHGHIVKSPFWS-DIFVQTTMVDMYAK 101
+N ++ N T+ + A A+ S +++HGH++++ I V +V+MYAK
Sbjct: 368 RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAK 427
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMG 160
C ++ A K+F M D SWN +I Q G E+ + + MR I ++F +
Sbjct: 428 CGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISS 487
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L+ A K L+ + VH + G+D D SV N + Y +C + VF + E
Sbjct: 488 LSSCA-GLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAE-- 544
Query: 221 RTVVSWNSIIG-GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
VSWN+++G + + + + +M+ G P+ T ++LL++ L G+
Sbjct: 545 HDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQ 604
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT-RVSWTAMISGYAQKG 338
VH+ + +G D V N LIS Y+K GD+ S LF M DR +SW +MISGY G
Sbjct: 605 VHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNG 664
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+L EA+ + M +G++ D T +++ C ALE G + L+ +V+V +
Sbjct: 665 NLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVES 724
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+DMYSKCG + A +LF ++ ++ SW +MI+G A +G +A+++F +M+ P
Sbjct: 725 ALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESP 784
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ VTF++VL AC+HAG +E+G YF +M + + P++ HYSC+ DLLGR GK+ + ++
Sbjct: 785 DHVTFVSVLSACSHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEY 843
Query: 519 VQSMPIKSDAGIWGTLLCACKIHR---NIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
+Q MPI+ +A IW T+L AC+ + NI++G + L E+EP + YV +N +A
Sbjct: 844 IQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAAT 903
Query: 576 GRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
G W+ A RT M++ KK G+S V +N TF D
Sbjct: 904 GMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGD 943
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 207/417 (49%), Gaps = 5/417 (1%)
Query: 22 WNSQIREAVDKN-EAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I A+D+N +A++ + M+++ I P+N +CA L Q +H
Sbjct: 449 WNTII-SALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDA 507
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI-VGFAQMGFLEKV 139
VK D V +V MY +C + +K+F+ M + D SWN M+ V + + ++
Sbjct: 508 VKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEI 567
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ +F NM G+ + VT + L A L L K VH+ + GV D V N IS
Sbjct: 568 VKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISC 627
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAK D+ E +F + + R +SWNS+I G Y ++++ MI+ G D
Sbjct: 628 YAKSGDMGSCEHLFTNMSD-RRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCC 686
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T +L++C AL +G +H+ GI + DV V + L+ MYSKCG +D A LF+ M
Sbjct: 687 TFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 746
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
R SW +MISGYA+ G +A+ +F M + E PD VT +S++S C +G +E G
Sbjct: 747 TQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGL 806
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
+ G+ + + +ID+ + G I +E +P E + W T++ C
Sbjct: 807 EYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVAC 863
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 233/482 (48%), Gaps = 33/482 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKN---DIEPNNLTFPFIAKAC--AKLSDFLYSQMI 76
W + V A +A +FR M + P + TF + +AC ++ +
Sbjct: 130 WTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQV 189
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLD--CAYKLFDKMPDRDVASWNAMIVGFAQMG 134
HG + K+ + S+ V ++ MY C A ++FD P RD+ +WNA++ +A+ G
Sbjct: 190 HGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKG 249
Query: 135 FLEKVLCLFYNM-------RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
+ LF +M +L + F ++ +T A++ + ++L V + + G
Sbjct: 250 DVASTFTLFKDMQRGDSRIQLRPTEHTFGSL--ITAASLSSGSSAVLDQVLVWVLKSGCS 307
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
+D+ V + +SA+A+ A+ +F +++ + V+ N +I G D ++++
Sbjct: 308 SDLYVGSALVSAFARHGLTDEAKDIFLSLKQ--KNAVTLNGLIVGLVRQDFSEEAVK--- 362
Query: 248 HMIYDGFRPDV----TTVVSLLSS----CVCPEALVQGRLVHSHGIHYGF-DLDVSVINT 298
I+ G R V T V LLS+ + E L GR+VH H + G DL ++V N
Sbjct: 363 --IFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNG 420
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L++MY+KCG I+SA +F M R+SW +IS Q G+ +EA+ + M + P
Sbjct: 421 LVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPS 480
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
++S +S C L G+ A GL + V N L+ MY +CG++ D ++F
Sbjct: 481 NFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFN 540
Query: 419 ALPEKTVVSWTTMIAGCALNGEFV-EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
++ E VSW TM+ A + + E + +F+ MM L PN+VTF+ +L A + LE
Sbjct: 541 SMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLE 600
Query: 478 KG 479
G
Sbjct: 601 LG 602
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 213/496 (42%), Gaps = 60/496 (12%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H ++K D+F+ +V+ YAK RL A ++FD+MP+R+ SW ++ G+ G
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142
Query: 136 LEKVLCLFYNMRLVGIQA-------DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
E+ +F M L +QA F T++ Q L VH +
Sbjct: 143 AEEAFRVFRAM-LREVQAGCRPTSFTFGTLLRACQDG-GPDRLGFAVQVHGLVSKTEYAS 200
Query: 189 DVSVCNTWISAYAKCN--DLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD--DSLN 244
+ +VCN IS Y C +A+ VF G +R +++WN+++ Y K D +
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTP--IRDLITWNALMS--VYAKKGDVASTFT 256
Query: 245 FYRHMIYDG----FRPDVTTVVSLLS--------SCVCPEALVQGRLVHSHGIHYGFDLD 292
++ M RP T SL++ S V + LV + G D
Sbjct: 257 LFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVW-------VLKSGCSSD 309
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ V + L+S +++ G D A+ +F + + V+ +I G ++ +EA+++F
Sbjct: 310 LYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRN 369
Query: 353 AGEV--PDLVTVLSMISGCGQS-GALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCG 408
+V V +LS ++ S L +G+ + GL D + V N L++MY+KCG
Sbjct: 370 TVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCG 429
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
+I A ++F + +SW T+I+ NG EA+ + M + + P+ ++ L
Sbjct: 430 AIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLS 489
Query: 469 ACTHAGFLEKG---------WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+C L G WG +L T V V + + G G + +
Sbjct: 490 SCAGLKLLTAGQQVHCDAVKWG-LDLDTSVSNV---------LVKMYGECGAMSDYWKVF 539
Query: 520 QSMPIKSDAGIWGTLL 535
SM + D W T++
Sbjct: 540 NSMA-EHDEVSWNTMM 554
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 179/410 (43%), Gaps = 41/410 (10%)
Query: 167 HAKHLSLLK---------SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
HA L LL+ ++H I G++ D+ +CN +++YAK L A VF +
Sbjct: 64 HADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMP 123
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD---GFRPDVTTVVSLLSSCV--CPE 272
E R VSW ++ G +++ +R M+ + G RP T +LL +C P+
Sbjct: 124 E--RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPD 181
Query: 273 ALVQGRLVHSHGI--HYGFDLDVSVINTLISMYSKC--GDIDSARFLFDGMCDRTRVSWT 328
L G V HG+ + + +V N LISMY C G A+ +FDG R ++W
Sbjct: 182 RL--GFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWN 239
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGE----VPDLVTVLSMISGCGQSGAL-----ELGK 379
A++S YA+KGD+ LF M+ P T S+I+ S ++
Sbjct: 240 ALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLV 299
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
W CS L V +AL+ +++ G +A+++F +L +K V+ +I G
Sbjct: 300 WVLKSGCSSDL----YVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQD 355
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL----MTKVYQVNPE 495
EA+ +F + N T++ +L A E+G + M + + +
Sbjct: 356 FSEEAVKIFVGTRN-TVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLK 414
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ + + ++ + G ++ A Q M +D W T++ A + N E
Sbjct: 415 IAVSNGLVNMYAKCGAIESASKIFQLME-ATDRISWNTIISALDQNGNCE 463
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 290/546 (53%), Gaps = 10/546 (1%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAK-CDRLDCAYKLFDKMPDRDVAS--WNAMIVGF 130
+ IH H++ S D FV + + + + K +D A+ ++ D V + +N +I +
Sbjct: 22 KQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQ-TDLHVGTLPYNTLIAAY 80
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A + ++ + G D T + +A + + VH + +G D+
Sbjct: 81 ASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDL 140
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N+ + Y+ C A VF E +R VVSW +I G FD+++N + M
Sbjct: 141 YVQNSLLHFYSVCGKWGGAGRVFD--EMLVRDVVSWTGLISGYVRTGLFDEAINLFLKM- 197
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
P+V T VS+L +C L G+ VH F + + V N L+ MY KC +
Sbjct: 198 --DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLC 255
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
AR LFD + DR VSWT++ISG Q ++L LF+ M+ +G PD + + S++S C
Sbjct: 256 EARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACA 315
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
GAL+ G+W Y G++ ++ + AL+DMY+KCG I A +F +P + + +W
Sbjct: 316 SLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNA 375
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF-NLMTKV 489
++ G A++G EAL F M+ +RPN VTFLA+L AC H+G + +G YF ++++
Sbjct: 376 LLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQP 435
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ +P L HY CM DLL R G L EA F+++MP+ D IWG LL ACK + N+E+ +
Sbjct: 436 FNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQE 495
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
+ L EL+ + YV ++NIYA RWD V +R +MK ++KFPG S++ ++G+
Sbjct: 496 ILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAH 555
Query: 610 TFTVED 615
F V D
Sbjct: 556 EFLVGD 561
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 214/446 (47%), Gaps = 8/446 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I A L++ R+ N P+ TFP + KAC K + +HG V
Sbjct: 73 YNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAV 132
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F D++VQ +++ Y+ C + A ++FD+M RDV SW +I G+ + G ++ +
Sbjct: 133 KMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAIN 192
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M +V A FV+V+ A +LS+ K VH + V N + Y
Sbjct: 193 LFLKMDVVPNVATFVSVL---VACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYV 249
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A +F + + R +VSW SII G + DSL + M G PD +
Sbjct: 250 KCECLCEARKLFDELPD--RDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIIL 307
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS+C AL GR V + G + D+ + L+ MY+KCG I+ A +F+G+ +
Sbjct: 308 TSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPN 367
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-- 379
R +W A++ G A G EAL+ F M AG P+ VT L++++ C SG + G+
Sbjct: 368 RNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSY 427
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
++ + + +ID+ + G + +A + +P V+ W +++ C N
Sbjct: 428 FYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKAN 487
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFL 464
G + ++ ++EL + + V L
Sbjct: 488 GNVELSQEILSHLLELKSQDSGVYVL 513
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W S I V + +L LF M+ + +EP+ + + ACA L Y + +
Sbjct: 269 IVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQE 328
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+I + DI + T +VDMYAKC ++ A +F+ +P+R++ +WNA++ G A G +
Sbjct: 329 YIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHE 388
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
L F M GI+ + VT + + A H+
Sbjct: 389 ALKHFELMIGAGIRPNEVTFLAILTACCHS 418
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 300/555 (54%), Gaps = 16/555 (2%)
Query: 60 IAKACAK--LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
I + C + LSD +H +++KS ++ ++DMY KC AYK+FD MP+
Sbjct: 12 ILRVCTRKGLSD--QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 177
R+V SW+A++ G G L+ L LF M GI + T +A L +
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG---CT 234
H F + IG + V V N+ + Y+KC + AE VFR I + R+++SWN++I G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD--RSLISWNAMIAGFVHAG 187
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
YG K D+ + RPD T+ SLL +C + G+ +H + GF S
Sbjct: 188 YGSKALDTFGMMQEANIKE-RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 295 --VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ +L+ +Y KCG + SAR FD + ++T +SW+++I GYAQ+G+ EA+ LF ++
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSI 410
D + S+I L GK A GL+ +V+ N+++DMY KCG +
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLV 364
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+A + F + K V+SWT +I G +G +++ +F++M+ ++ P+ V +LAVL AC
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
+H+G +++G F+ + + + + P + HY+C+ DLLGR G+LKEA + +MPIK + GI
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 531 WGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKR 590
W TLL C++H +IE+G+ V L ++ + A YV M+N+Y G W+ N R +
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 591 NQVKKFPGQSLVHIN 605
+KK G S V I
Sbjct: 545 KGLKKEAGMSWVEIE 559
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 231/477 (48%), Gaps = 17/477 (3%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
S+P R + W++ + V + +L LF M + I PN TF KAC
Sbjct: 66 SMPER--------NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC 117
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
L+ IHG +K F + V ++VDMY+KC R++ A K+F ++ DR + SWN
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
AMI GF G+ K L F M+ I+ D T+ L +A + K +H F +
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 183 HIGVD--ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
G + ++ + + Y KC L A F I+E +T++SW+S+I G +F
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE--KTMISWSSLILGYAQEGEFV 295
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+++ ++ + + D + S++ L QG+ + + + L+ SV+N+++
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 355
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY KCG +D A F M + +SWT +I+GY + G +++R+F+ M PD V
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 361 TVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
L+++S C SG ++ G + F + G+K V ++D+ + G + +A+ L
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 475
Query: 420 LPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+P K V W T+++ C ++G+ ++ ++ +D + N ++ + AG+
Sbjct: 476 MPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK-NPANYVMMSNLYGQAGY 531
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 2/222 (0%)
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+VS+L C QG VH + + G L++ N LI MY KC + A +FD M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+R VSW+A++SG+ GDL +L LF M G P+ T + + CG ALE G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ G + V V N+L+DMYSKCG I +A ++F + +++++SW MIAG G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 440 EFVEALDLFHQMMELDL--RPNRVTFLAVLQACTHAGFLEKG 479
+ALD F M E ++ RP+ T ++L+AC+ G + G
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 315/620 (50%), Gaps = 33/620 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I + + L LF +M + P LT+ + AC + Y M+HG I
Sbjct: 192 WNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRI 251
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K+ + ++V Y KC L A +LF+++ +DV SWNAMI Q G E L
Sbjct: 252 IKAGL-EATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENAL 310
Query: 141 CLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
LF M V +Q + VT + L A L + +H+ + ++ D S+ N+ I+
Sbjct: 311 GLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLIT 370
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC ++ A +F + LR ++SWNS++ G ++ + ++ M+ G PD
Sbjct: 371 FYSKCREVGKAREIFERLL--LRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDS 428
Query: 259 TTVVSLLSSCVCPEA----LVQGRLVHSHGIHY----GFDLDVSVINTLISMYSKCGDID 310
++ + ++ + +G+ +H + + G L VS N ++ MY+K I
Sbjct: 429 HSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVS--NAILKMYAKFNRIA 486
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
A +F GM +R SW AM+ GY++ ++ L +F + G D V++ +++ CG
Sbjct: 487 DAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCG 546
Query: 371 QSGALELGKWFDNYACSGGL--------KDNVM-VCNALIDMYSKCGSIGDARELFYALP 421
+ +L+LGK F +A L +D+++ + NALI MYSKCGSI DA ++F +
Sbjct: 547 RLVSLQLGKQF--HAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME 604
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
K V SWT MI GCA +G VEAL LF +M ++PN+VTFLA+L AC H G +++G
Sbjct: 605 RKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSY 664
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ-----SMPIKSDA-GIWGTLL 535
YF+ M Y ++P + HY+CM DL GR G+ A V+ P D +W LL
Sbjct: 665 YFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLL 724
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
AC + +++G A ++ ELEP A Y+ +AN+YA G W+ +R M+ ++K
Sbjct: 725 GACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRK 784
Query: 596 FPGQSLVHINGKTCTFTVED 615
G S + + F D
Sbjct: 785 EVGCSWIDTGNRRHVFVAGD 804
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 203/431 (47%), Gaps = 30/431 (6%)
Query: 44 RMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD 103
R K+ + + + + FI + C+ S FL SQ H +
Sbjct: 36 RNKQLEFQNHGFSSQFIFR-CSACSKFLVSQSEH-------------------------E 69
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
RL CA +LFD P+RDV SW+A+I +++ G + LF M G+Q + ++ L +
Sbjct: 70 RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
+ + L + +H + I G D + WI+ Y++C L+ A+ VF +
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
+ WNSII + + + L + M+ G P T S++++C G +VH
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
I G + ++ N+L++ Y KCG++ A LF+ + + VSW AMI+ Q+G+ +
Sbjct: 250 RIIKAGLE-ATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGEN 308
Query: 343 ALRLFFAMEAAGE--VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
AL LF M P+ VT LS++S AL G+ + L+ + + N+L
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSL 368
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
I YSKC +G ARE+F L + ++SW +M+AG N + D+F +MM + P+
Sbjct: 369 ITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDS 428
Query: 461 VTFLAVLQACT 471
+ + A +
Sbjct: 429 HSLTIIFNAAS 439
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 255/527 (48%), Gaps = 31/527 (5%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A LF++M ++PN + + K + + +HG +++ F D ++ +
Sbjct: 104 QAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWI 163
Query: 97 DMYAKCDRLDCAYKLFDK--MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA- 153
MY++C L+ A ++FD+ + D+ WN++I + G +VL LF M VG+ A
Sbjct: 164 TMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAP 223
Query: 154 ---DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ +V+ ++ K+ ++ VH I G++A ++ N+ ++ Y KC +L+ A
Sbjct: 224 TELTYASVVNACGSSGEEKYGAM---VHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHAS 279
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM--IYDGFRPDVTTVVSLLSSC 268
+F I + VVSWN++I + +++L +R M + +P+ T +SLLS+
Sbjct: 280 QLFERISR--KDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAV 337
Query: 269 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
AL GR +H+H ++D S+ N+LI+ YSKC ++ AR +F+ + R +SW
Sbjct: 338 SGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWN 397
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPD--LVTVLSMISGCGQSGAL--ELGKWFDNY 384
+M++GY Q +F M +G PD +T++ + SG + GK Y
Sbjct: 398 SMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGY 457
Query: 385 ----ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
GG+ ++ V NA++ MY+K I DA ++F + + SW M+ G + N +
Sbjct: 458 ILRRITPGGV--SLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAK 515
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY--QVNPE--- 495
F + L +F +++ + V+ +L +C L+ G + ++ K++ Q P
Sbjct: 516 FEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDS 575
Query: 496 -LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
L+ + + + + G +K+A M + D W ++ C H
Sbjct: 576 LLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGCAHH 621
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 150/314 (47%), Gaps = 18/314 (5%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD----FLYSQ 74
I WNS + + + +F+RM + IEP++ + I A ++ S F +
Sbjct: 393 IISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGK 452
Query: 75 MIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
IHG+I++ +P + V ++ MYAK +R+ A K+F M +RD SWNAM+ G+++
Sbjct: 453 EIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSR 512
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-------G 185
E VL +F ++ G D V++ L + L L K H+ +
Sbjct: 513 NAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPH 572
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D+ +S+ N IS Y+KC +K A VF +E + V SW ++I GC + ++L
Sbjct: 573 QDSLLSINNALISMYSKCGSIKDAAQVFLKMER--KDVFSWTAMITGCAHHGLAVEALQL 630
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMY 303
+ M DG +P+ T ++LL +C LVQ + ++ YG + +I ++
Sbjct: 631 FERMKTDGIKPNQVTFLALLMACA-HGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLF 689
Query: 304 SKCGDIDSARFLFD 317
+ G D A+ L +
Sbjct: 690 GRSGQFDRAKSLVE 703
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
F N+ S C+ + S+ + A++LF P + V+SW+ +IA + G
Sbjct: 42 FQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGN 101
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
F +A LF +MM L+PN + ++L+ G
Sbjct: 102 FAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTG 135
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 293/574 (51%), Gaps = 13/574 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSD----------IFVQTTMVDMYAKC 102
N + F+ C + +H I+K+ + D I V +++ MY++C
Sbjct: 43 NQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRC 102
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI-QADFVTVMGL 161
L A K+FD MP +D SWN+ I G G +E +F + GI Q D T+ +
Sbjct: 103 GELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTV 162
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A + + K +HS G + +++V N I++Y +C VF + E +
Sbjct: 163 LTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSE--K 220
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VV+W ++I G + G +++SL + M P+ T +S L +C +A+ +GR +H
Sbjct: 221 NVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIH 280
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
G D+ + + L+ MYSKCG ++ A +F+ + VS T ++ G AQ G +
Sbjct: 281 GLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEE 340
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
E++++F M G V D + +++ G +L LGK + N V N LI
Sbjct: 341 ESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLI 400
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
+MYSKCG + D+ ++F +P++ VSW +MIA A +G AL L+ +M + P V
Sbjct: 401 NMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDV 460
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TFL++L AC H G +EKG G+ M K Y + P + HY+C+ D++GR G L EA F++
Sbjct: 461 TFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIER 520
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
+P K +W LL AC IH N E+G+Y A +LF P S APY+ +ANIY+ G+W
Sbjct: 521 LPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKER 580
Query: 582 ANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A MK V K G S + I + +F VED
Sbjct: 581 ARTIKKMKDMGVTKETGISWIEIEKQIHSFVVED 614
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I ++L LF +M+ ++PN+LT+ AC+ L + IHG +
Sbjct: 225 WTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVW 284
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+ +++ ++DMY+KC L+ A+K+F+ + D S ++VG AQ GF E+ +
Sbjct: 285 KLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQ 344
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M G+ D + + L+L K +HS I ++ V N I+ Y+
Sbjct: 345 VFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYS 404
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL + +F + + R VSWNS+I +L Y M +G P T
Sbjct: 405 KCGDLDDSIKIFCWMPQ--RNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTF 462
Query: 262 VSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+SLL +C + +G + S YG + ++ M + G ++ A+ + +
Sbjct: 463 LSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLP 522
Query: 321 DRTRV-SWTAMISGYAQKGD 339
++ + W A++ + G+
Sbjct: 523 EKPGILVWQALLGACSIHGN 542
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 273/508 (53%), Gaps = 6/508 (1%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A LF+++P+RDV +W AMIVGF + +F M +Q + T+ + +A
Sbjct: 62 ACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKG 121
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA-KCNDLKMAELVFRGIEEGLRTVVSW 226
K LS HS G+D V V N + YA C + A VF I L+T VSW
Sbjct: 122 MKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIP--LKTAVSW 179
Query: 227 NSIIGGCTY-GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
++I G T+ GD + L F R M+ + P+ + +C + G+ +H+
Sbjct: 180 TTLIAGFTHRGDGYSGLLAF-RQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVT 238
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
YG D V+N+++ MY +C + A+ F + ++ ++W +I+GY ++ D E+L
Sbjct: 239 KYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLS 297
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LFF M + G P+ T S+ + C L G+ G NV + N+LIDMY+
Sbjct: 298 LFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYA 357
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCGSI D+ +LF +P + +VSWTTM+ G +G EA+ LF +M++ ++P+R+ F+
Sbjct: 358 KCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMG 417
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL C+HAG ++KG YF M + Y +NP+ Y C+ DLLGR G+++EA V++MP +
Sbjct: 418 VLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFE 477
Query: 526 SDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLR 585
D +WG LL ACK ++ +G A R+ + P+ A Y+ ++ IYA G+W A +R
Sbjct: 478 PDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMR 537
Query: 586 TMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+MK KK G+S + I + +F V
Sbjct: 538 KLMKGMNKKKEVGKSWIEIRNEVYSFVV 565
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 217/473 (45%), Gaps = 11/473 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N H+A +F M +++++PN T + KAC + + H
Sbjct: 77 WTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLAT 136
Query: 82 KSPFWSDIFVQTTMVDMYA-KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K ++VQ ++DMYA C +D A +F+ +P + SW +I GF G L
Sbjct: 137 KHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGL 196
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M L + + + +A S K +H+ G+ D V N+ + Y
Sbjct: 197 LAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMY 256
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+CN L A+ F + E + +++WN++I G D +SL+ + M +G++P+ T
Sbjct: 257 CRCNYLCDAKRCFGELTE--KNLITWNTLIAGYERSDS-SESLSLFFQMGSEGYKPNCFT 313
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+ ++C L G+ VH + GFD +V++IN+LI MY+KCG I + LF M
Sbjct: 314 FTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMP 373
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
R VSWT M+ GY G EA++LF M +G PD + + ++ GC +G ++ G K
Sbjct: 374 GRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLK 433
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+F + + + + ++D+ + G + +A +L +P E W ++ C
Sbjct: 434 YFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGAC--K 491
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ L LD RPN +L A E WG F M K+ +
Sbjct: 492 AYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAA---EGKWGEFAKMRKLMK 541
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 4/303 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T W + I + + + LL FR+M D+ PN+ +F A+ACA +S + + IH
Sbjct: 175 TAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIH 234
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ K D V +++DMY +C+ L A + F ++ ++++ +WN +I G+ + E
Sbjct: 235 AAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSE 294
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L LF+ M G + + T +T A + LS + VH + G D +V++ N+ I
Sbjct: 295 S-LSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLI 353
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + + +F + R +VSW +++ G +++ + M+ G +PD
Sbjct: 354 DMYAKCGSISDSHKLFCDMPG--RDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPD 411
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ +L C + +G + S Y + D + ++ + + G ++ A L
Sbjct: 412 RIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLV 471
Query: 317 DGM 319
+ M
Sbjct: 472 ENM 474
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
LI Y G A LF+ + +R V+WTAMI G+ +A +F M +
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQ 106
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY-SKCGSIGDARE 415
P+ T+ S++ C AL G + A G+ +V V NAL+DMY + C ++ DA
Sbjct: 107 PNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALS 166
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+F +P KT VSWTT+IAG G+ L F QM+ D+ PN +F +AC
Sbjct: 167 VFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARAC 221
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LI Y G +A LF +PE+ VV+WT MI G + +A +F +M+ +++PN
Sbjct: 49 LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPN 108
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMADLLGRKGKLK 513
T +VL+AC L G +L TK VY N L+ Y+ +
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASC------ATMD 162
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+AL +P+K+ A W TL+ A HR +A+R LE
Sbjct: 163 DALSVFNDIPLKT-AVSWTTLI-AGFTHRGDGYSGLLAFRQMLLE 205
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 287/535 (53%), Gaps = 38/535 (7%)
Query: 116 PDRDVASWNAMIVGFA---QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
P + +NA + + G + + L L+ ++ L + D +T L +A + +
Sbjct: 79 PPDSASPYNAALRALSLCTDRGLVTRCLPLYCSL-LRSARPDHLTFPFLLKACARLQERN 137
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+V + +G ADV V N + A C+ + A +F G +R +VSWN++IGG
Sbjct: 138 YGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDG--SHVRDLVSWNTLIGG 195
Query: 233 CTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
++L + M+ DG PD T++ ++S L GR +H + +G
Sbjct: 196 YVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRC 255
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD---------- 341
V ++N ++ MY KCGD++ A+ +F+G+ +T VSWT MI GYAQ G +D
Sbjct: 256 TVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMP 315
Query: 342 ---------------------EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
EALRLF M+ A PD +T+++++S C Q GALE+G W
Sbjct: 316 ERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMW 375
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+Y + +VM+ L+DMYSKCG+I A +F +PEK ++WT MI+G A +G
Sbjct: 376 VHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGH 435
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
A+ F +M+EL L+P+ +TF+ VL AC HAG +++G +F+LM Y + ++ HYS
Sbjct: 436 ADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYS 495
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
CM DLLGR G L EA V +MP++ DA +WG L AC++H NI +GE A +L EL+P
Sbjct: 496 CMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPG 555
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV +AN+YA +R MM+ V+K PG S + +NG F V+D
Sbjct: 556 DSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKD 610
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 213/439 (48%), Gaps = 36/439 (8%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
P++LTFPF+ KACA+L + Y + G+++ F +D+FV + A C + A K
Sbjct: 117 RPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARK 176
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIH 167
LFD RD+ SWN +I G+ + G + L +F+ R+VG + D VT++G+ +
Sbjct: 177 LFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFW--RMVGDGAVTPDEVTMIGVVSGSAQ 234
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE--------- 218
+ L L + +H + GV V + N + Y KC DL+ A+ VF GI++
Sbjct: 235 LRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTM 294
Query: 219 -------GL-------------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
GL R V WN+++ G + ++L + M PD
Sbjct: 295 IVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDD 354
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+V+LLS+C AL G VH + L V + L+ MYSKCG+I+ A +F
Sbjct: 355 ITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKE 414
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ ++ ++WTAMISG A G D A++ F M G PD +T + ++S C +G ++ G
Sbjct: 415 IPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEG 474
Query: 379 KWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCA 436
+ F + S L+ + + ++D+ + G + +A L +P E V W + C
Sbjct: 475 QEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACR 534
Query: 437 LNGEFVEALDLFHQMMELD 455
++G +++ELD
Sbjct: 535 MHGNITLGEKAAMKLVELD 553
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 157/355 (44%), Gaps = 38/355 (10%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WN+ I V + +AL +F RM + + P+ +T + A+L D + +HG+
Sbjct: 188 SWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGY 247
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE-- 137
+ + + ++DMY KC L+ A +F+ + + + SW MIVG+AQ G ++
Sbjct: 248 VESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDA 307
Query: 138 -----------------------------KVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ L LF++M+ ++ D +T++ L A
Sbjct: 308 RKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQL 367
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L + VH + V V + + Y+KC +++ A VF+ I E + ++W +
Sbjct: 368 GALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPE--KNALTWTA 425
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV-QGRLVHSHGI-H 286
+I G D ++ +++ MI G +PD T + +LS+C C LV +G+ S +
Sbjct: 426 MISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSAC-CHAGLVKEGQEFFSLMVSK 484
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGYAQKGDL 340
Y + + + ++ + + G +D A L + M + V W A+ G++
Sbjct: 485 YHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNI 539
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 299/553 (54%), Gaps = 20/553 (3%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ + + T ++ YA C + +FD + ++V WN++I G+A+
Sbjct: 46 HSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLY 105
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ LF M + D T+ L++ + L KS+H I IG +D V N+
Sbjct: 106 NEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSI 165
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG------CTYGDKFDDSLNFYRHMI 250
+S Y KC + + + VF E +R SWN +I G C + + ++ F + M
Sbjct: 166 MSMYCKCGNFEESRKVFD--EMTIRNSGSWNVLIAGYAVSGNCNFRE---ETWEFVKQMQ 220
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIH----YGFDLDVSVINTLISMYSK 305
D RPD T+ SLL C + GR +H + + G D DV + LI MYS+
Sbjct: 221 MDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSR 280
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA-GEVPDLVTVLS 364
+ R +FD M R SWTAMI+GY + GD DEAL LF M+ G P+ V+++S
Sbjct: 281 SNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVS 340
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-K 423
++ C L G+ +A L + V +CNALIDMYSKCGS+ AR +F K
Sbjct: 341 VLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCK 400
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF 483
+SW++MI+G L+G+ EA+ L+ +M++ +RP+ +T + +L AC+ +G + +G +
Sbjct: 401 DAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIY 460
Query: 484 NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
+ + Y + P L ++C+ D+LGR G+L ALDF+++MP++ +WG L+ IH +
Sbjct: 461 SSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGD 520
Query: 544 IEIGEYVAYR-LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+E+ E +AYR L +LEP + + YV ++N+YA RWD VA +R MMK +++K PG S +
Sbjct: 521 LEMQE-LAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWI 579
Query: 603 HINGKTCTFTVED 615
IN KT F V D
Sbjct: 580 SINNKTHCFYVAD 592
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 230/450 (51%), Gaps = 18/450 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS I ++A LF +M +D+ P++ T ++K ++L + IHG +
Sbjct: 92 WNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSI 151
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG---FLEK 138
+ F SD V +++ MY KC + + K+FD+M R+ SWN +I G+A G F E+
Sbjct: 152 RIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREE 211
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIH----IGVDADVSVC 193
M++ ++ D T+ L K + +H + + +G+D+DV +
Sbjct: 212 TWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLG 271
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYD 252
I Y++ N + + VF ++ R V SW ++I G D++L+ +R M + D
Sbjct: 272 CCLIDMYSRSNKVVVGRRVFDRMK--CRNVFSWTAMINGYVENGDSDEALSLFRDMQVID 329
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G P+ ++VS+L +C L+ GR +H + + +VS+ N LI MYSKCG +DSA
Sbjct: 330 GIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSA 389
Query: 313 RFLF--DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
R +F D +C + +SW++MISGY G EA+ L+ M AG PD++T + ++S C
Sbjct: 390 RRVFEDDSLC-KDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACS 448
Query: 371 QSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSW 428
+SG + G + + G++ + + ++DM + G + A + A+P E W
Sbjct: 449 RSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVW 508
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+++ ++G+ +E +L ++ + + L P
Sbjct: 509 GALVSCSIIHGD-LEMQELAYRFL-IQLEP 536
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 187/413 (45%), Gaps = 15/413 (3%)
Query: 141 CLFYNMRLVGIQADFVTVMGLTQA---AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
C R +F + L Q+ ++ K L L + HS + +G+ + + I
Sbjct: 6 CTLIPSRYYASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLI 65
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
AYA C + LVF ++ + V WNS+I G ++++ + M PD
Sbjct: 66 FAYAICQHPYHSRLVFDSLQH--KNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPD 123
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T+ +L AL G+ +H I GF D V N+++SMY KCG+ + +R +FD
Sbjct: 124 DFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFD 183
Query: 318 GMCDRTRVSWTAMISGYAQKGDL---DEALRLFFAMEAAGEVPDLVTVLSMISGC-GQSG 373
M R SW +I+GYA G+ +E M+ PD T+ S++ C G G
Sbjct: 184 EMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKG 243
Query: 374 ALELGKWFDNYACSG----GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ G+ Y GL +V + LIDMYS+ + R +F + + V SWT
Sbjct: 244 KWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWT 303
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI G NG+ EAL LF M +D + PNRV+ ++VL AC+ L G +
Sbjct: 304 AMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVR 363
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
++N E++ + + D+ + G L A + + DA W +++ +H
Sbjct: 364 -KELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLH 415
>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
Length = 610
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 274/516 (53%), Gaps = 6/516 (1%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
P TF + K CA +D + +H + S+ T + +MY KC R A +
Sbjct: 56 RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR--LVGIQADFVTVMGLTQAAIHA 168
+FD+MP RD +WNA++ G+A+ G + M+ G Q D +T++ + A A
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADA 175
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+ L + VH+F + G+D V+V + AY KC ++ A VF + +R VSWN+
Sbjct: 176 RVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMP--VRNSVSWNA 233
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+I G ++L + M+ +G V++ L +C L + R VH + G
Sbjct: 234 MIDGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVG 293
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGYAQKGDLDEALRLF 347
+VSV+N LI+ YSKC D A F+ + +TR+SW AMI G+ Q G ++A RLF
Sbjct: 294 LKSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLF 353
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M+ PD T++S+I +W Y+ L ++ V ALIDMYSKC
Sbjct: 354 ARMQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKC 413
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + AR+LF + ++ V++W MI G +G A++LF +M PN TFL+VL
Sbjct: 414 GRVTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVL 473
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC+HAG +++G YF M K Y + P + HY + DLLGR GK+ EA F+Q+MPI+
Sbjct: 474 AACSHAGLVDEGRKYFASM-KDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPG 532
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAA 563
++G +L ACK+H+N+E+ E A ++FEL P +
Sbjct: 533 ISVYGAMLGACKLHKNVELAEESAQKIFELGPEEGS 568
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 3/292 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + A +AL LF RM + ++ + +AC +L ++ +H +V
Sbjct: 231 WNAMIDGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLV 290
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA-SWNAMIVGFAQMGFLEKVL 140
+ S++ V ++ Y+KC R D A F+++ + SWNAMI+GF Q G E
Sbjct: 291 RVGLKSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAE 350
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M+L ++ D T++ + A + +H + I +D D+ V I Y
Sbjct: 351 RLFARMQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMY 410
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC + +A +F + R V++WN++I G ++ + M G P+ TT
Sbjct: 411 SKCGRVTIARKLFDSARD--RHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETT 468
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+S+L++C + +GR + YG + + TL+ + + G +D A
Sbjct: 469 FLSVLAACSHAGLVDEGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEA 520
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N++ T WN+ I + A LF RM+ +++P++ T + A A +SD
Sbjct: 321 FNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLENVKPDSFTLVSVIPAVADISD 380
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
L ++ IHG+ ++ DI+V T ++DMY+KC R+ A KLFD DR V +WNAMI G
Sbjct: 381 PLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLFDSARDRHVITWNAMIHG 440
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSVHSFGIHIG 185
+ GF + + LF M+ G + T + + A HA + S+ +G+ G
Sbjct: 441 YGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGRKYFASMKDYGLEPG 500
Query: 186 VD 187
++
Sbjct: 501 ME 502
>gi|357148978|ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 598
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/596 (30%), Positives = 320/596 (53%), Gaps = 9/596 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ST+ WN I+ A + L + + + + TFP +AK+CA L
Sbjct: 7 TSTLRHWNRLIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCS 66
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H H + SD+FV T+++DMYAKC L A +LFD+MP + SWN M+ +++
Sbjct: 67 VHAHALLVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSC 126
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS---VHSFGIHIGVDADVSV 192
+ + + +F MR VG++ T++GL + + LS ++ + + G+D D+ V
Sbjct: 127 VTEAVAMFNTMRGVGVRPSGATLVGLLSGRVDS--LSTRNPGLCLYGYSMKSGLDTDLPV 184
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ ++ + L A L+F + E ++VV+W++++ G + + HM
Sbjct: 185 LNSVLTMLVRAGQLYDACLLFDSMHE--KSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTA 242
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G++ D +V+L+S+ V L+ + VH+ I GF+ + ++++L+++Y+KCGD+++A
Sbjct: 243 GYKFDSVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAA 302
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ +FD + + V WT+MISGYA+ G D+AL++F +M P+ TV S++S C
Sbjct: 303 QEVFDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANL 362
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKTVVSWTT 430
G+ K +++ + GL+ ++ V LID Y KCG++ ARE+F + + W+
Sbjct: 363 GSANQAKKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSA 422
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
MI G A GE EAL LF++M ++P+ + F +L AC ++G +++G F +T Y
Sbjct: 423 MINGYACIGEGSEALVLFNEMQNQGVQPDAIVFTHLLTACNYSGLVDEGLQCFRSLTVEY 482
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P + HY C DLL + G L A +F + +PI+ + +L A H E V
Sbjct: 483 GIEPSIEHYMCTIDLLCKAGHLSAAKEFFRKIPIQLQNQVLAPILTAYSAHCADSSIELV 542
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
+ L LEPH++ V MAN+ G+W + R ++ + + K PG+S + ++G
Sbjct: 543 SEELLNLEPHNSDHCVLMANMLNCLGKWKKATDYRRLITKQGLVKEPGRSCIEMSG 598
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 3/360 (0%)
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
P + WN +I A G + L + + G+ D T L ++ + L
Sbjct: 6 PTSTLRHWNRLIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGC 65
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
SVH+ + +G +DV V + + YAKC L A +F E T++SWN ++ +
Sbjct: 66 SVHAHALLVGAASDVFVLTSLLDMYAKCACLPDARRLFD--EMPSPTLISWNCMVTAYSK 123
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV-CPEALVQGRLVHSHGIHYGFDLDVS 294
+++ + M G RP T+V LLS V G ++ + + G D D+
Sbjct: 124 SSCVTEAVAMFNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLP 183
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V+N++++M + G + A LFD M +++ V+W+AM+SG+ Q GD + LF M+ AG
Sbjct: 184 VLNSVLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAG 243
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D V ++++IS G L + K G + + ++L+++Y+KCG + A+
Sbjct: 244 YKFDSVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQ 303
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
E+F A+ K VV WT+MI+G A G +AL +F M+ D+ PN T +VL AC + G
Sbjct: 304 EVFDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLG 363
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/585 (33%), Positives = 307/585 (52%), Gaps = 18/585 (3%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIA----KACAKLSD--FL-YSQMIHGHIVKSPFWSDIF 90
A+ LF R++ + P PF+ K+CA +D FL ++ +H V+S S +F
Sbjct: 51 AMALFSRLRASS-PPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVF 109
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
V T + D+YAK L A K+FD+MP ++V SW ++ + G + L F MR G
Sbjct: 110 VATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASG 169
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ D A A LS + VH+F +G+D+ V NT + YA+C+D+ A
Sbjct: 170 VHCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRAL 229
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD----GFRPDVTTVVSLLS 266
+ G R V +W ++I + +++ + M+ + P+ T ++++
Sbjct: 230 AAVSRM--GTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIA 287
Query: 267 SCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSARFLFDGMCDRTRV 325
+C + G +H+ GF SV N+L+++Y++ G + +A +F + V
Sbjct: 288 ACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVV 347
Query: 326 SWTAMISGYAQKGDLDEALRLFFAME--AAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
SW+A+ISGYAQ+G ++A LF M + P+ T+ S++S C + +L+ G+
Sbjct: 348 SWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHT 407
Query: 384 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
A + GL+ + M+ +ALIDMY K GS+ DA +F + VVSWT MI G A +G +
Sbjct: 408 LAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKK 467
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
AL+LF +M + L+P+ VTF+ VL AC HAG +E G Y N M ++Y + P HY C+
Sbjct: 468 ALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVV 527
Query: 504 DLLGRKGKLKEALDFVQSMPI-KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSA 562
DLLGR G++ EA + + + + D +W +LL AC E G+ A R E EP A
Sbjct: 528 DLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGA 587
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
+V MAN+YA G+W A R MMK+ V K G S + + G+
Sbjct: 588 GAHVAMANLYASKGQWHEAAQERHMMKQKGVVKGAGWSSITVGGE 632
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 198/447 (44%), Gaps = 12/447 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ W + + H+AL F M+ + + ++ + ACA + +H
Sbjct: 139 VVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHA 198
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
K S +V T+ +YA+C +D A +M RDVA+W +I + Q G ++
Sbjct: 199 FCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKE 258
Query: 139 VLCLFYNM----RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ F M V + T + A + L + +H+ G SV N
Sbjct: 259 AIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVAN 318
Query: 195 TWISAYAKCND-LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ ++ Y + L A+ VFR E ++ VVSW++II G +D+ +R M +
Sbjct: 319 SLVTLYTRAAGCLSAADAVFR--ESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHS 376
Query: 254 F--RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
RP+ T+ SLLS C +L GR +H+ + G + + + LI MY K G +
Sbjct: 377 GCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLD 436
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F VSWTAMI GYA+ G +AL LF M G PD VT + +++ C
Sbjct: 437 ADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCH 496
Query: 372 SGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKTVVSW 428
+G +ELG ++ + GL ++D+ + G I +A EL A E+ V W
Sbjct: 497 AGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVW 556
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELD 455
T+++ CA GE + ME +
Sbjct: 557 TSLLRACAARGEEETGKKAAERAMEAE 583
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 11/273 (4%)
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--VP 357
+ ++ + A LFDGM R V++ +++G+A GD A+ LF + A+ P
Sbjct: 8 LKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPLAP 67
Query: 358 DLVTVLSMI----SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
VLS++ + + L +A +V V AL D+Y+K G +G A
Sbjct: 68 ADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLA 127
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
++F +P K VVSWTT++A G EAL F +M + + + A L AC A
Sbjct: 128 LKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADA 187
Query: 474 GFLEKGWGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 532
G L +G K+ P + + +A L R + AL V M + D W
Sbjct: 188 GLLSRGREVHAFCAKLGLDSTPYVA--NTLATLYARCSDVDRALAAVSRMGTR-DVAAWT 244
Query: 533 TLLCA-CKIHRNIEIGEYVAYRLFELEPHSAAP 564
T++ A + R E E L E +A+P
Sbjct: 245 TVISAYVQTGRAKEAIEAFVRMLREESSVAASP 277
>gi|242035545|ref|XP_002465167.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
gi|241919021|gb|EER92165.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
Length = 564
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 278/502 (55%), Gaps = 8/502 (1%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLD 106
+ + P++ TFP + +A + + H ++ ++F ++V Y + R+
Sbjct: 63 HPLRPDSFTFPPLVRAAPGPAS---AAQFHACALRLGLLHPNVFASGSLVHAYLRFGRVA 119
Query: 107 CAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAI 166
AY++FD+MP+RDV +WNAM+ G + + LF M G+ D VT+ + +
Sbjct: 120 EAYRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCV 179
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
+L +H + + G+ ++ VCN I Y K L A VF G+ LR +V+W
Sbjct: 180 LLGDRALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGM--ALRDLVTW 237
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
NSII G K ++ + M+ G PDV T+VSL S+ + VH +
Sbjct: 238 NSIISAYEQGGKVAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRR 297
Query: 287 YGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
G+D+ D+ N ++ MY+K ID+A+ +FD + DR VSW +I+GY Q G +EA+R
Sbjct: 298 RGWDVGDIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVR 357
Query: 346 LFFAMEA-AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
++ M+ G P T +S++ GAL+ G + GL +V V LID+Y
Sbjct: 358 IYNDMQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLY 417
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCG + +A LF +P ++ W +IAG ++G +AL+LF QM + ++P+ VTF+
Sbjct: 418 AKCGKLVEAMLLFEHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQQEGIKPDNVTFV 477
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
++L AC+HAG +++G +F+LM VY + P HY+CM D+LGR G+L EA +F+Q MPI
Sbjct: 478 SLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPI 537
Query: 525 KSDAGIWGTLLCACKIHRNIEI 546
K D+ +WG LL AC+IH N+E+
Sbjct: 538 KPDSAVWGALLGACRIHGNVEL 559
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 205/426 (48%), Gaps = 6/426 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WN+ + A A+ LF RM + + +T + C L D + ++H
Sbjct: 133 VPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLLGDRALALVMHV 192
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ VK ++FV ++D+Y K L A +F M RD+ +WN++I + Q G +
Sbjct: 193 YAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSIISAYEQGGKVAA 252
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWI 197
+ LF+ M G+ D +T++ L A KSVH + G D D+ N +
Sbjct: 253 AVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWDVGDIIAGNAVV 312
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRP 256
YAK + + A++VF + + R VVSWN++I G ++++ Y M ++G +P
Sbjct: 313 DMYAKLSKIDAAQMVFDNLPD--RDVVSWNTLITGYMQNGLSNEAVRIYNDMQNHEGLKP 370
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
T VS+L + AL QG +H+ I G +LDV V LI +Y+KCG + A LF
Sbjct: 371 IQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLYAKCGKLVEAMLLF 430
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ M R+ W A+I+G G +AL LF M+ G PD VT +S+++ C +G ++
Sbjct: 431 EHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQQEGIKPDNVTFVSLLAACSHAGLVD 490
Query: 377 LGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAG 434
G+ +FD G+ ++DM + G + +A E +P K W ++
Sbjct: 491 QGRSFFDLMQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSAVWGALLGA 550
Query: 435 CALNGE 440
C ++G
Sbjct: 551 CRIHGN 556
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 278/511 (54%), Gaps = 7/511 (1%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAI- 166
A +F + P ++ +N +I G + ++ +MR G D T + +A
Sbjct: 54 ATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTR 113
Query: 167 --HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
H H+ L S+HS I G D DV V + Y+K L A VF I E + VV
Sbjct: 114 LPHYFHVGL--SLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPE--KNVV 169
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SW +II G F ++L +R ++ G RPD T+V +L +C L GR + +
Sbjct: 170 SWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYM 229
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G +V V +L+ MY+KCG ++ AR +FDGM ++ V W+A+I GYA G EAL
Sbjct: 230 RESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEAL 289
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
+FF M+ PD ++ + S C + GALELG W N ++ ALID Y
Sbjct: 290 DVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFY 349
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCGS+ A+E+F + K V + +I+G A+ G A +F QM+++ ++P+ TF+
Sbjct: 350 AKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFV 409
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
+L CTHAG ++ G YF+ M+ V+ V P + HY CM DL R G L EA D ++SMP+
Sbjct: 410 GLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPM 469
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
++++ +WG LL C++H++ ++ E+V +L ELEP ++ YV ++NIY+ RWD +
Sbjct: 470 EANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKI 529
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R+ + + ++K PG S V ++G F V D
Sbjct: 530 RSSLNQKGMQKLPGCSWVEVDGVVHEFLVGD 560
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 230/439 (52%), Gaps = 9/439 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM-IHGHI 80
+N+ IR V + A+ ++ M+++ P+N TFPF+ KAC +L + + + +H +
Sbjct: 69 YNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLV 128
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K+ F D+FV+T +V +Y+K L A K+FD++P+++V SW A+I G+ + G + L
Sbjct: 129 IKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEAL 188
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF + +G++ D T++ + A L+ + + + G +V V + + Y
Sbjct: 189 GLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMY 248
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC ++ A VF G+ E + VV W+++I G ++L+ + M + RPD
Sbjct: 249 AKCGSMEEARRVFDGMVE--KDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYA 306
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFD-LDVSVINT-LISMYSKCGDIDSARFLFDG 318
+V + S+C AL G + G+ G + L V+ T LI Y+KCG + A+ +F G
Sbjct: 307 MVGVFSACSRLGALELGNW--ARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKG 364
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + V + A+ISG A G + A +F M G PD T + ++ GC +G ++ G
Sbjct: 365 MRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG 424
Query: 379 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCA 436
++F + + + ++D+ ++ G + +A++L ++P E + W ++ GC
Sbjct: 425 HRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCR 484
Query: 437 LNGEFVEALDLFHQMMELD 455
L+ + A + Q++EL+
Sbjct: 485 LHKDTQLAEHVLKQLIELE 503
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 74/196 (37%), Gaps = 34/196 (17%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL + + N L+ + A +F P + + T+I G N F +A+ ++
Sbjct: 30 GLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVY 89
Query: 449 HQMMELDLRPNRVTFLAVLQACT------HAG----------------FLEKGW------ 480
M + P+ TF VL+ACT H G F++ G
Sbjct: 90 ASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSK 149
Query: 481 -GYFNLMTKVYQVNPELNHYSCMADLLG--RKGKLKEALDFVQ---SMPIKSDAGIWGTL 534
G+ KV+ PE N S A + G G EAL + M ++ D+ +
Sbjct: 150 NGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRI 209
Query: 535 LCACKIHRNIEIGEYV 550
L AC ++ G ++
Sbjct: 210 LYACSRVGDLASGRWI 225
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 315/584 (53%), Gaps = 16/584 (2%)
Query: 24 SQIREAVDKNEAHKALLLFRRMKKNDIEPNN-LTFPFIAKACAKLSDFLYSQMIHGHIVK 82
SQI + + AL L + D N L + + + C K+ F + H H+VK
Sbjct: 29 SQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVK 88
Query: 83 SPFWSDIFVQTTMVDMYAK--CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
S +D FV +++ +Y K D L ++FD + +DV SW +MI G+ + G +
Sbjct: 89 SGLETDRFVGNSLLSLYFKLGSDSL-LTRRVFDGLFVKDVVSWASMITGYVREGKSGIAI 147
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF++M GI+ + T+ + +A +L L K H + G D++ + ++ I Y
Sbjct: 148 ELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMY 207
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR--PDV 258
+ + A +F + E V W ++I T D ++++L F+ ++ + R PD
Sbjct: 208 GRNSVSSDARQLFDELLEP--DPVCWTTVISAFTRNDLYEEALGFF-YLKHRAHRLCPDN 264
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T S+L++C L QG +H+ I YGF +V ++L+ MY KCG ++ ++ LFD
Sbjct: 265 YTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDR 324
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M +R VSW+A+++ Y GD ++A+ LF M+ DL + ++I C A+ G
Sbjct: 325 MSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEV----DLYSFGTVIRACAGLAAVTPG 380
Query: 379 KWFD-NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
K Y GG +D V+V +AL+D+Y+KCG I A +F +P + +++W +MI G A
Sbjct: 381 KEIHCQYIRKGGWRD-VIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQ 439
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG A+ +F M++ ++P+ ++F+ +L AC+H G +++ YF+LMT Y + P +
Sbjct: 440 NGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVE 499
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIEIGEYVAYRLFE 556
HY+CM DLLGR G L+EA + +++ ++D+ +W LL AC N E +A +L E
Sbjct: 500 HYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLME 559
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
LEP YV +AN+Y GRWD +R +MK Q+KK PGQS
Sbjct: 560 LEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQS 603
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 210/438 (47%), Gaps = 10/438 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S I V + ++ A+ LF M + IEPN T + KAC+++ + + + HG +V
Sbjct: 130 WASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVV 189
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F S+ + ++++DMY + A +LFD++ + D W +I F + E+ L
Sbjct: 190 RRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALG 249
Query: 142 LFY-NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
FY R + D T + A + L + +H+ I G +V ++ + Y
Sbjct: 250 FFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMY 309
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC ++ ++ +F + R VSW++++ + ++ ++N +R M D+ +
Sbjct: 310 GKCGAVEKSQRLFDRMSN--RNSVSWSALLAVYCHNGDYEKAVNLFREMK----EVDLYS 363
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++ +C A+ G+ +H I G DV V + L+ +Y+KCG I+ A +FD M
Sbjct: 364 FGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMP 423
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK- 379
R ++W +MI G+AQ G A+++F AM G PD ++ + ++ C +G ++ +
Sbjct: 424 TRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARH 483
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
+FD G+K V N ++D+ + G + +A L + S W ++ C
Sbjct: 484 YFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTT 543
Query: 439 -GEFVEALDLFHQMMELD 455
A + ++MEL+
Sbjct: 544 CTNSATAERIAKKLMELE 561
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 273/508 (53%), Gaps = 6/508 (1%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
A LF+++P+RDV +W AMIVGF + +F M +Q + T+ + +A
Sbjct: 62 ACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKG 121
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA-KCNDLKMAELVFRGIEEGLRTVVSW 226
K LS HS G+D V V N + YA C + A VF I L+T VSW
Sbjct: 122 MKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIP--LKTAVSW 179
Query: 227 NSIIGGCTY-GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
++I G T+ GD + L F R M+ + P+ + +C + G+ +H+
Sbjct: 180 TTLIAGFTHRGDGYSGLLAF-RQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVT 238
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
YG D V+N+++ MY +C + A+ F + ++ ++W +I+GY ++ D E+L
Sbjct: 239 KYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLS 297
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LFF M + G P+ T S+ + C L G+ G NV + N+LIDMY+
Sbjct: 298 LFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYA 357
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCGSI D+ +LF +P + +VSWTTM+ G +G EA+ LF +M++ ++P+R+ F+
Sbjct: 358 KCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMG 417
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
VL C+HAG ++KG YF M + Y +NP+ Y C+ DLLGR G+++EA V++MP +
Sbjct: 418 VLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFE 477
Query: 526 SDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLR 585
D +WG LL ACK ++ +G A R+ + P+ A Y+ ++ IYA G+W A +R
Sbjct: 478 PDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMR 537
Query: 586 TMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+MK KK G+S + I + +F V
Sbjct: 538 KLMKGMNKKKEVGKSWIEIRNEVYSFVV 565
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 217/473 (45%), Gaps = 11/473 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N H+A +F M +++++PN T + KAC + + H
Sbjct: 77 WTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLAT 136
Query: 82 KSPFWSDIFVQTTMVDMYA-KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K ++VQ ++DMYA C +D A +F+ +P + SW +I GF G L
Sbjct: 137 KHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGL 196
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
F M L + + + +A S K +H+ G+ D V N+ + Y
Sbjct: 197 LAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMY 256
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+CN L A+ F + E + +++WN++I G D +SL+ + M +G++P+ T
Sbjct: 257 CRCNYLCDAKRCFGELTE--KNLITWNTLIAGYERSDS-SESLSLFFQMGSEGYKPNCFT 313
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+ ++C L G+ VH + GFD +V++IN+LI MY+KCG I + LF M
Sbjct: 314 FTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMP 373
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
R VSWT M+ GY G EA++LF M +G PD + + ++ GC +G ++ G K
Sbjct: 374 GRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLK 433
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+F + + + + ++D+ + G + +A +L +P E W ++ C
Sbjct: 434 YFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGAC--K 491
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ L LD RPN +L A E WG F M K+ +
Sbjct: 492 AYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAA---EGKWGEFAKMRKLMK 541
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 4/303 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T W + I + + + LL FR+M D+ PN+ +F A+ACA +S + + IH
Sbjct: 175 TAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIH 234
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ K D V +++DMY +C+ L A + F ++ ++++ +WN +I G+ + E
Sbjct: 235 AAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSE 294
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L LF+ M G + + T +T A + LS + VH + G D +V++ N+ I
Sbjct: 295 S-LSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLI 353
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC + + +F + R +VSW +++ G +++ + M+ G +PD
Sbjct: 354 DMYAKCGSISDSHKLFCDMPG--RDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPD 411
Query: 258 VTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ +L C + +G + S Y + D + ++ + + G ++ A L
Sbjct: 412 RIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLV 471
Query: 317 DGM 319
+ M
Sbjct: 472 ENM 474
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
LI Y G A LF+ + +R V+WTAMI G+ +A +F M +
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQ 106
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY-SKCGSIGDARE 415
P+ T+ S++ C AL G + A G+ +V V NAL+DMY + C ++ DA
Sbjct: 107 PNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALS 166
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
+F +P KT VSWTT+IAG G+ L F QM+ D+ PN +F +AC
Sbjct: 167 VFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARAC 221
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LI Y G +A LF +PE+ VV+WT MI G + +A +F +M+ +++PN
Sbjct: 49 LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPN 108
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMADLLGRKGKLK 513
T +VL+AC L G +L TK VY N L+ Y+ +
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASC------ATMD 162
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+AL +P+K+ A W TL+ A HR +A+R LE
Sbjct: 163 DALSVFNDIPLKT-AVSWTTLI-AGFTHRGDGYSGLLAFRQMLLE 205
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 296/552 (53%), Gaps = 6/552 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
+ ++ A+ S+FL IH + +K +F+Q +++MY KC L A +LFD+MP+R+
Sbjct: 11 LLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERN 70
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVH 178
V SW++++ G G L LF M G ++ + T + QA +++++ ++
Sbjct: 71 VVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIY 130
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
S + G++ +V + N +++A + L A +F +R V+WN+++GG Y +
Sbjct: 131 SLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFE--TSPIRDTVTWNTMMGG--YLEF 186
Query: 239 FDDSLN-FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
+ + F+R+M +G +PD T S L+ +L G VH+ + G+ D+ V N
Sbjct: 187 SSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGN 246
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
+L+ MY K ++ FD + + SWT M G Q G+ AL + M+ G P
Sbjct: 247 SLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKP 306
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+ T+ + ++ C ++E GK F G +V V NAL+DMY+KCG + A +F
Sbjct: 307 NKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVF 366
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ ++VVSWTTMI CA NG+ EAL +F +M E + PN +TF+ VL AC+ GF++
Sbjct: 367 RSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVD 426
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+GW Y + M K Y + P +HY CM +LGR G +KEA + + MP +W TLL A
Sbjct: 427 EGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSA 486
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
C+IH ++E G+ A + + + + YV ++N+ A WD V +LR +M+ VKK P
Sbjct: 487 CQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVP 546
Query: 598 GQSLVHINGKTC 609
G + + C
Sbjct: 547 GSRIAAYALQEC 558
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 199/424 (46%), Gaps = 10/424 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+S + V A AL LF M + ++PN TF +AC+ + + I+ +
Sbjct: 74 WSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLV 133
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+S ++F+ + + +L A ++F+ P RD +WN M+ G+ + E++
Sbjct: 134 VRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSS-EQIP 192
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+ M G++ D T L + VH+ + G D+ V N+ + Y
Sbjct: 193 VFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMY 252
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
K L+ F I + V SW + GC + +L M G +P+ T
Sbjct: 253 LKNQKLEEGFKAFDEIPH--KDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFT 310
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ + L++C C ++ +G+ H I G D+DV V N L+ MY+KCG +DSA +F
Sbjct: 311 LATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTN 370
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
R+ VSWT MI AQ G EAL++F M+ P+ +T + ++ C Q G ++ G K
Sbjct: 371 SRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWK 430
Query: 380 WFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCA 436
+ + G+ ++ +C ++ + + G I +A+EL +P V W T+++ C
Sbjct: 431 YLSSMDKDYGIIPGEDHYIC--MVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQ 488
Query: 437 LNGE 440
++G+
Sbjct: 489 IHGD 492
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 8/335 (2%)
Query: 12 KIYRSSTINQ---WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+I+ +S I WN+ + ++ + + + + +R M + ++P+ TF A +S
Sbjct: 163 QIFETSPIRDTVTWNTMMGGYLEFS-SEQIPVFWRYMNREGVKPDEFTFASALTGLATIS 221
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+H +V+S + DI V ++VDMY K +L+ +K FD++P +DV SW M
Sbjct: 222 SLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMAD 281
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G Q G L + M+ +G++ + T+ A + K H I +G D
Sbjct: 282 GCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDV 341
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV V N + YAKC + A VFR R+VVSW ++I C + ++L +
Sbjct: 342 DVCVDNALLDMYAKCGCMDSAWTVFRSTNS--RSVVSWTTMIMACAQNGQPGEALQIFDE 399
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M P+ T + +L +C + +G + + S YG ++S+ + G
Sbjct: 400 MKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAG 459
Query: 308 DIDSARFLFDGMCDRTRVS-WTAMISGYAQKGDLD 341
I A+ L M V W ++S GD++
Sbjct: 460 LIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVE 494
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 39/323 (12%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++LL S ++G +H++ I + + N L++MY KC D+ SA LFD M +
Sbjct: 9 INLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPE 68
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKW 380
R VSW+++++G G +AL LF M G V P+ T +S + C S +
Sbjct: 69 RNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQ 128
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ GL+ NV + NA + + G + +A ++F P + V+W TM+ G E
Sbjct: 129 IYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYL---E 185
Query: 441 F-VEALDLFHQMMELD-LRPNRVTFLAVLQAC-----------THAGFLEKGWG----YF 483
F E + +F + M + ++P+ TF + L HA + G+G
Sbjct: 186 FSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVG 245
Query: 484 NLMTKVYQVNPELNH---------------YSCMADLLGRKGKLKEALDFV---QSMPIK 525
N + +Y N +L ++ MAD + G+ + AL + + M +K
Sbjct: 246 NSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVK 305
Query: 526 SDAGIWGTLLCACKIHRNIEIGE 548
+ T L AC ++E G+
Sbjct: 306 PNKFTLATALNACACLASMEEGK 328
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 253/440 (57%), Gaps = 1/440 (0%)
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+H+ + +G+ +D V NT I+ Y+ C+ A V +G VSWN+II G +
Sbjct: 115 LHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHA 174
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ +L + M D T+++ L +C + G+L H+ + GF+++ +
Sbjct: 175 GLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMG 234
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
++LISMY+KCG ++ AR +FDGM DR V WT+MISGY Q G EA++LF M+ AG
Sbjct: 235 SSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVK 294
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
D T+ +++S CGQ GAL+LG++ Y GL ++ V N+LIDMYSKCG I A ++
Sbjct: 295 VDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGF 475
F + ++ SWT +I G A NG EALDLF QM E + PN +TFL VL +C+H G
Sbjct: 355 FCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGL 414
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+E+G+ +F+ M+ +Y + P + HY CM DLLGR L EA F++ MPI DA +W +LL
Sbjct: 415 VEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLL 474
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
AC+ + + EYVA R+ LEP+ V ++ +YA RW +RT + + K
Sbjct: 475 FACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTK 534
Query: 596 FPGQSLVHINGKTCTFTVED 615
PG S + ++G F D
Sbjct: 535 QPGCSFIEVDGCVHEFFAGD 554
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 196/413 (47%), Gaps = 9/413 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+N + A++ + +H VK SD FV T+++MY+ C A +
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 113 DKMPD--RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
D P D SWN +I G+ G K L F M + D VT++ A
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ + K H+ + G + + + ++ IS YAKC ++ A +F G+ + R V W S+I
Sbjct: 212 MKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPD--RNAVCWTSMI 269
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G T + +++ +R M G + D T+ +++SSC AL GR VH++ +G
Sbjct: 270 SGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLG 329
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+SV N+LI MYSKCGDI A +F GM R SWT +I G+A G EAL LF M
Sbjct: 330 KDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQM 389
Query: 351 EAAGEV-PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
E G V P+ +T L +++ C G +E G + F + G+ + ++D+ +
Sbjct: 390 EEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAK 449
Query: 409 SIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+ +A + +P V W +++ C GE A + ++ L+ PN+
Sbjct: 450 LLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLE--PNK 500
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 149/288 (51%), Gaps = 9/288 (3%)
Query: 253 GFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G+ P D ++ + LS+ ++V G +H+ + G D V+NTLI+MYS C +
Sbjct: 87 GYMPIDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPST 146
Query: 312 ARFLFD----GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
AR + D G D VSW +I+GY G ++AL+ F M + D VT+L+ +
Sbjct: 147 ARSVLDSAPKGASD--TVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALV 204
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C ++ +++GK + G + N + ++LI MY+KCG + DAR +F +P++ V
Sbjct: 205 ACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVC 264
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT+MI+G G+ EA+ LF M ++ + T V+ +C G L+ G Y +
Sbjct: 265 WTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGR-YVHAYC 323
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ + +++ + + D+ + G +K+A D M +K D W ++
Sbjct: 324 DIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGM-VKRDNFSWTVII 370
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 148/289 (51%), Gaps = 13/289 (4%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+S WN+ I + +KAL F +M K + +++T ACA+ ++
Sbjct: 158 ASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKL 217
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
H +V + F + ++ ++++ MYAKC +++ A ++FD MPDR+ W +MI G+ Q+G
Sbjct: 218 CHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQ 277
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + LF +M++ G++ D T+ + + L L + VH++ G+ D+SV N+
Sbjct: 278 SKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNS 337
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GF 254
I Y+KC D+K A +F G+ + R SW II G ++L+ + M + G
Sbjct: 338 LIDMYSKCGDIKKAYDIFCGMVK--RDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGV 395
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGI-----HYGFDLDV 293
P+ T + +L+SC + QG R+ +GI HYG +D+
Sbjct: 396 MPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDL 444
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 300/600 (50%), Gaps = 53/600 (8%)
Query: 31 DKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK--------------LSDFLYSQMI 76
D ++ ++A LFR M +N I ++++ + C++ LS ++ Q +
Sbjct: 186 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQV 245
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +K F SD+ + +++DMYAK +D A +F MP+ V SWN MI G+ Q
Sbjct: 246 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQS 305
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K + M+ G + D +T + + A I
Sbjct: 306 SKAIEYLQRMQYHGFEPDEITYVNMLVACI------------------------------ 335
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
K D++ +F G+ ++ SWN+I+ G + + +++ +R M + P
Sbjct: 336 -----KSGDIEAGRQMFDGMSS--PSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHP 388
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TT+ +LSS L GR VH+ F D+ + + LI MYSKCG ++ A+ +F
Sbjct: 389 DRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIF 448
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + + V W +M++G + EA F M G P + +++S C + +L
Sbjct: 449 DRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLS 508
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ + G ++ V +ALIDMYSKCG + AR +F + K V+W MI G A
Sbjct: 509 QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYA 568
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
NG EA+ L+ M+ +P+ +TF+AVL AC+H+G ++ G FN M + + V P +
Sbjct: 569 QNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLV 628
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+HY+C+ D LGR G+L EA + MP K D IW LL +C+++ ++ + A LF
Sbjct: 629 DHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFH 688
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV-HINGKTCTFTVED 615
L+P ++APYV +ANIY+ GRWD +R +M NQV K PG S + H NG F V+D
Sbjct: 689 LDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQ-AFMVDD 747
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 206/446 (46%), Gaps = 53/446 (11%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+E + + C L ++IH H+++S D F+ +++ YAKC+ +D +
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
+LFD+MP RD+ +WNA++ + + LE LF M I + + LT+
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGA 120
Query: 170 HLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + + H I IG+D ++ V N + YAKC + A F + E VS+
Sbjct: 121 LVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPE--PNEVSFT 178
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV---CPE-----------A 273
+++GG D+ +++ +R M+ + D ++ S+L C C E +
Sbjct: 179 AMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSS 238
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
V G+ VH I +GF+ D+ + N+L+ MY+K G++DSA +F M + + VSW MI+G
Sbjct: 239 DVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAG 298
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
Y QK +A+ M+ G PD +T ++M+ C +SG +E G
Sbjct: 299 YGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAG--------------- 343
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
R++F + ++ SW T+++G + N EA+ LF +M
Sbjct: 344 --------------------RQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQF 383
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKG 479
+ P+R T +L + LE G
Sbjct: 384 RSVHPDRTTLAIILSSLAGMMLLEGG 409
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 176/383 (45%), Gaps = 25/383 (6%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L Q I K K +H+ + + D + N I YAKCN + + +F + +
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPK-- 68
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ---G 277
R + +WN+I+G + +D+ + M T + +L + C ALV G
Sbjct: 69 RDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACG-ALVDVECG 127
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
R H I G D ++ V N L+ MY+KC I A F + + VS+TAM+ G A
Sbjct: 128 RRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADS 187
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG--------- 388
++EA RLF M D V++ S++ C + G E G N S
Sbjct: 188 DQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHC 247
Query: 389 -----GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
G + ++ + N+L+DMY+K G++ A +F +PE +VVSW MIAG + +
Sbjct: 248 LTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSK 307
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
A++ +M P+ +T++ +L AC +G +E G F+ M+ +P L+ ++ +
Sbjct: 308 AIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSLSSWNTIL 362
Query: 504 DLLGRKGKLKEALDFVQSMPIKS 526
+ KEA+ + M +S
Sbjct: 363 SGYSQNENHKEAVKLFREMQFRS 385
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 168/376 (44%), Gaps = 18/376 (4%)
Query: 16 SSTINQWNSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
S +++ WN+ I +NE HK A+ LFR M+ + P+ T I + A + +
Sbjct: 352 SPSLSSWNT-ILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGR 410
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H K+ F +DI++ + ++ MY+KC +++ A ++FD++ + D+ WN+M+ G +
Sbjct: 411 QVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNS 470
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ F MR G+ + + LS + VHS G D V +
Sbjct: 471 LDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGS 530
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I Y+KC D+ A VF + + V+WN +I G D+++ Y MI G
Sbjct: 531 ALIDMYSKCGDVDAARWVFDMMLG--KNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGE 588
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD T V++L++C + G ++ +S +G + V +I + G + A
Sbjct: 589 KPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAE 648
Query: 314 FLFDGM-CDRTRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGEVPDLVTVLSMISGC 369
L D M C + W ++S D+ A R F ++ P V + ++ S
Sbjct: 649 VLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAP-YVLLANIYS-- 705
Query: 370 GQSGALELGKWFDNYA 385
LG+W D A
Sbjct: 706 ------SLGRWDDAKA 715
>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 955
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/589 (30%), Positives = 304/589 (51%), Gaps = 8/589 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN+ + H+A L M+ +P+ +T + CA+L + + IH
Sbjct: 369 IVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIH 428
Query: 78 GHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
G+ ++ D + ++ ++DMY+KC+ ++ A LF D+ SWNAMI G++Q +
Sbjct: 429 GYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYY 488
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
EK LF + G TV + + A L+ KSVH + + G + N+
Sbjct: 489 EKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSL 548
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY-DGFR 255
+ Y DL + + + + SWN+II GC GD+F ++L + M F
Sbjct: 549 MQMYINSGDLTSGFSILQE-NSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFN 607
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D T+V++LS+ E L QG+ +HS + F D V N+LI+MY +C DI+SAR +
Sbjct: 608 YDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKV 667
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F +W MIS + + EAL LF ++ P+ T++S++S C + G L
Sbjct: 668 FKFHSISNLCTWNCMISALSHNKESREALELFRHLQFK---PNEFTIVSVLSACTRIGVL 724
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
GK Y G + N + AL+D+YS CG + +A ++F +K+ +W +MIA
Sbjct: 725 IHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRH-SQKSESAWNSMIAAY 783
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+G +A++LFH+M +L ++ + TF+++L AC+H+G + +G Y+ M + Y + PE
Sbjct: 784 GNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPE 843
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
H + ++L R G++ EA F + + + +G+WG LL C H +E+G+ VA +LF
Sbjct: 844 AEHQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLSVCNYHGELELGKKVAEKLF 903
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
E+EP + Y+ +AN+Y G W +LR + ++K G SL+ +
Sbjct: 904 EMEPQNVGYYISLANMYVAAGSWKDATDLRQYIHDQGLRKCAGYSLIDV 952
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 246/515 (47%), Gaps = 22/515 (4%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLS----DFLYSQMIHGHIVKSPFWSDIFVQT 93
A+ LF +M + + + F + C KLS + + ++H +K+ + + T
Sbjct: 78 AINLFDKMPQRNFHVREVHFDLVVD-CIKLSLEKPNIFTATVVHCAALKTGALAYLPTST 136
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
++ +Y+K + LF+ + +RDV +WNA+I + + F M +
Sbjct: 137 SLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIKDQTRF 196
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA--EL 211
D T++ + H K+ + +H I G+ D+S+CN I+ YAKC D+ + E
Sbjct: 197 DSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSEC 256
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
+F +E + VVSWNSI+ GC Y + SL ++R M + R D ++ +S+C
Sbjct: 257 LFEEME--YKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSL 314
Query: 272 EALVQGRLVHSHGIHYGFDLD--VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
L G +H GI G+ + VSV N+LIS+YS+C +D A +F M + VSW A
Sbjct: 315 GELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNA 374
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
M+ GYA ++ EA L M+ G PD+VT+ +M+ C + G+ YA
Sbjct: 375 MMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRR 434
Query: 389 GL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
+ D++ + N LIDMYSKC + A LF++ + +VSW MI+G + N + +A +L
Sbjct: 435 HMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNL 494
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE-LNHYSCMADLL 506
F +++ + T A+L +C A L F ++Q+ LNH + L+
Sbjct: 495 FKELLCCGQNCSSSTVFAILSSCNSANSLN-----FGKSVHIWQLKSGFLNHTLLVNSLM 549
Query: 507 G---RKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G L +Q +D W T++ C
Sbjct: 550 QMYINSGDLTSGFSILQENSSIADIASWNTIIVGC 584
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 259/558 (46%), Gaps = 46/558 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I +++ A+ F++M K+ ++ T + + L +F ++IH +
Sbjct: 166 WNAIISASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSI 225
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYK--LFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
KS DI + +++MYAKC ++ + LF++M +DV SWN+++ G G LEK
Sbjct: 226 KSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKS 285
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV--DADVSVCNTWI 197
LC F M +AD V++ A L+ + +H GI +G ++ VSV N+ I
Sbjct: 286 LCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLI 345
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRP 256
S Y++C + +AE VFR E + +VSWN+++ G + ++ + M G F+P
Sbjct: 346 SLYSQCEAVDVAETVFR--EMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQP 403
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARFL 315
D+ T+ ++L C +GR +H + I D + + N LI MYSKC ++ A L
Sbjct: 404 DIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELL 463
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F VSW AMISGY+Q ++A LF + G+ TV +++S C + +L
Sbjct: 464 FHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSL 523
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT----VVSWTTM 431
GK + G ++ ++ N+L+ MY G + F L E + + SW T+
Sbjct: 524 NFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSG---FSILQENSSIADIASWNTI 580
Query: 432 IAGCALNGEFVEALDLFHQMME-LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK-- 488
I GC +F EAL+ F M + + +T + VL A + L +G +L K
Sbjct: 581 IVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSP 640
Query: 489 -------------VYQVNPELNH---------------YSCMADLLGRKGKLKEALDFVQ 520
+Y ++N ++CM L + +EAL+ +
Sbjct: 641 FGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFR 700
Query: 521 SMPIKSDAGIWGTLLCAC 538
+ K + ++L AC
Sbjct: 701 HLQFKPNEFTIVSVLSAC 718
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 251/531 (47%), Gaps = 16/531 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS +R + + K+L FRRM ++ ++++ AC+ L + + + IHG +
Sbjct: 269 WNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGI 328
Query: 82 KSPFWSDIFVQ--TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K + + FV +++ +Y++C+ +D A +F +M +D+ SWNAM+ G+A + +
Sbjct: 329 KLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEA 388
Query: 140 LCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 197
L M+ G Q D VT+ + +++H + I + D + + N I
Sbjct: 389 FDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLI 448
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y+KCN ++ AEL+F + +VSWN++I G + ++ + N ++ ++ G
Sbjct: 449 DMYSKCNVVEKAELLFHSTAQ--IDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCS 506
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RFLF 316
+TV ++LSSC +L G+ VH + GF ++N+L+ MY GD+ S L
Sbjct: 507 SSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQ 566
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGAL 375
+ SW +I G + EAL F M D +T+++++S L
Sbjct: 567 ENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELL 626
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
GK + A + V N+LI MY +C I AR++F + +W MI+
Sbjct: 627 NQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISAL 686
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV-YQVNP 494
+ N E EAL+LF L +PN T ++VL ACT G L G + YQ N
Sbjct: 687 SHNKESREALELFRH---LQFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNS 743
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ + + DL G+L A+ + KS++ W +++ A H N E
Sbjct: 744 FIS--AALVDLYSTCGRLDNAVKVFRHSQ-KSESA-WNSMIAAYGNHGNGE 790
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K + S + WN I E+ +AL LFR ++ +PN T + AC ++ +
Sbjct: 669 KFHSISNLCTWNCMISALSHNKESREALELFRHLQ---FKPNEFTIVSVLSACTRIGVLI 725
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ + +HG+ + + + F+ +VD+Y+ C RLD A K+F + + ++WN+MI +
Sbjct: 726 HGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVF-RHSQKSESAWNSMIAAYG 784
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
G EK + LF+ M +GI+ T + L A H+
Sbjct: 785 NHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHS 821
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 277/516 (53%), Gaps = 22/516 (4%)
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
+W +I +A G L L F +R GI D L +A+ KH +L +S+H+
Sbjct: 43 AWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAV 102
Query: 182 IHIGVDADVSVCNTWISAYAKCN--------------------DLKMAELVFRGIEEGLR 221
I +G D+ N ++ Y+K + +K+ + +R
Sbjct: 103 IRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVR 162
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSWN++I G ++++LN + M + RPD T+ S+L + +G+ +H
Sbjct: 163 DVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIH 222
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ I +GFD DV + ++LI MY+KC ++ + F + +R +SW ++I+G Q G D
Sbjct: 223 GYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFD 282
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
+ L F M P V+ S+I C AL LGK Y G DN + ++L+
Sbjct: 283 QGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLL 342
Query: 402 DMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
DMY+KCG+I AR +F + ++ +VSWT +I GCA++G ++A+ LF +M+ ++P
Sbjct: 343 DMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPC 402
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
V F+AVL AC+HAG +++GW YFN M + + V P L HY+ +ADLLGR G+L+EA DF+
Sbjct: 403 YVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFI 462
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
+M + +W TLL AC+ H+NIE+ E V ++ ++P + +V M+NIY+ RW
Sbjct: 463 SNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWR 522
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A LR M++ +KK P S + + K TF D
Sbjct: 523 DAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGD 558
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 223/444 (50%), Gaps = 28/444 (6%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
+L F ++ I P+ FP + +A F +Q +H +++ F D++ +++
Sbjct: 60 SLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMN 119
Query: 98 MYAKCD----------------------RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
MY+K ++D KLFD+MP RDV SWN +I G AQ G
Sbjct: 120 MYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGM 179
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ L + M ++ D T+ + +++ K +H + I G D DV + ++
Sbjct: 180 YEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSS 239
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
I YAKC ++++ F + R +SWNSII GC +FD L F+R M+ + +
Sbjct: 240 LIDMYAKCTQVELSVCAFHLLSN--RDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVK 297
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P + S++ +C AL G+ +H++ I GFD + + ++L+ MY+KCG+I AR++
Sbjct: 298 PMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYI 357
Query: 316 FDG--MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F+ MCDR VSWTA+I G A G +A+ LF M G P V +++++ C +G
Sbjct: 358 FNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAG 417
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTM 431
++ G K+F++ G+ + A+ D+ + G + +A + + E+ S W+T+
Sbjct: 418 LVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTL 477
Query: 432 IAGCALNGEFVEALDLFHQMMELD 455
+A C + A + ++++ +D
Sbjct: 478 LAACRAHKNIELAEKVVNKILLVD 501
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 131/247 (53%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I +AL + + M K ++ P++ T I + ++ + IHG+ +
Sbjct: 167 WNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAI 226
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D+F+ ++++DMYAKC +++ + F + +RD SWN++I G Q G ++ L
Sbjct: 227 RHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLG 286
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M ++ V+ + A H L+L K +H++ I +G D + + ++ + YA
Sbjct: 287 FFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYA 346
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++KMA +F IE R +VSW +II GC D+++ + M+ DG +P
Sbjct: 347 KCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAF 406
Query: 262 VSLLSSC 268
+++L++C
Sbjct: 407 MAVLTAC 413
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
++W +I YA G L +L F + + G PD S++ L +
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 385 ACSGGLKDNVMVCNALIDMYSK----------------------CGSIGDARELFYALPE 422
G ++ NAL++MYSK I R+LF +P
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ VVSW T+IAG A NG + EAL++ +M + +LRP+ T ++L T + KG
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG 218
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 270/537 (50%), Gaps = 34/537 (6%)
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA-DFVTVMGLTQAAIHAK 169
+F ++P+ N ++ ++ F EK + L++N+R + A D + L +A
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ +H +G D + I+ YA C + A L+F + V+WN I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHP--DAVAWNMI 193
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
I G +DD+L + M +PD + ++LS+C L GR +H G+
Sbjct: 194 IDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGY 253
Query: 290 DLDVSVINTLISMYSKCGDID-------------------------------SARFLFDG 318
+D + LI+MY+ CG +D ARF+FD
Sbjct: 254 AIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQ 313
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M +R V W+AMISGYA+ EAL+LF M VPD +T+LS+IS C GAL
Sbjct: 314 MIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA 373
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
W Y G + V NALIDMY+KCG++ ARE+F +P K V+SW++MI A++
Sbjct: 374 NWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMH 433
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G A+ LF +M E+++ PN VTF+ VL AC HAG +E+G F+ M + ++P H
Sbjct: 434 GNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREH 493
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM DL R L++A++ +++MP + IWG+L+ AC++H E+GE+ A RL ELE
Sbjct: 494 YGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELE 553
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P V ++NIYA RW+ V +R M + K S + IN + F + D
Sbjct: 554 PDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMAD 610
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 253/542 (46%), Gaps = 45/542 (8%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
N +R + K + L+ ++ N + +FP + KA +K+S F + IHG
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F D F+QT ++ MYA C R+ A LFDKM D +WN +I G+ Q G + L
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +MR ++ D V + + A HA +LS +++H F G D + I+ YA
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 202 KCNDLKMAELVFRGIEE----------------GL-------------RTVVSWNSIIGG 232
C + +A ++ G+ G+ R +V W+++I G
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
D+ ++L + M+ PD T++S++S+C AL Q +H++ GF
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA 388
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+SV N LI MY+KCG++ AR +F+ M + +SW++MI+ +A G+ D A++LF M+
Sbjct: 389 LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKE 448
Query: 353 AGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 411
P+ VT + ++ CG +G +E G K F + G+ ++D+Y + +
Sbjct: 449 VNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLR 508
Query: 412 DARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL--- 467
A EL +P V+ W ++++ C ++GE L F L+L P+ L VL
Sbjct: 509 KAIELIETMPFAPNVIIWGSLMSACQVHGE--AELGEFAAKRLLELEPDHDGALVVLSNI 566
Query: 468 ----QACTHAGFLEKGWGYFNLMTKVYQVNPELN---HYSCMADLLGRKG-KLKEALDFV 519
+ G + K Y + + E+N H MAD ++ ++ E LD V
Sbjct: 567 YAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEV 626
Query: 520 QS 521
S
Sbjct: 627 VS 628
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 159/390 (40%), Gaps = 66/390 (16%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I AL LF M+ +D++P+++ + AC + Y + IH +
Sbjct: 190 WNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVK 249
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYK------------------------------- 110
+ + D +QT +++MYA C +D A K
Sbjct: 250 DNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARF 309
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD+M +RD+ W+AMI G+A+ ++ L LF M D +T++ + A H
Sbjct: 310 IFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGA 369
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L+ +H++ G +SV N I YAKC +L A VF + + V+SW+S+I
Sbjct: 370 LAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPR--KNVISWSSMI 427
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
D ++ +R M P+ T + +L +C H+ + G
Sbjct: 428 NAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYAC-----------GHAGLVEEGEK 476
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
L S+IN + TR + M+ Y + L +A+ L M
Sbjct: 477 LFSSMIN-------------------EHGISPTREHYGCMVDLYCRANFLRKAIELIETM 517
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKW 380
A P+++ S++S C G ELG++
Sbjct: 518 PFA---PNVIIWGSLMSACQVHGEAELGEF 544
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 248/455 (54%), Gaps = 3/455 (0%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L Q+ I K + K +H+ G D + ++ Y C+ L A L+F I +
Sbjct: 81 LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK-- 138
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ WN +I G + ++ ++ Y M G PD T +L +C A+ GR +
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H H + G++ DV V LI MY+KCG + SAR +FD + R V W +M++ Y+Q G
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
D L L M G P T+++ IS + AL G+ + + + V AL
Sbjct: 259 DACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTAL 318
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+DMY+KCGS+ AR LF L K VVSW MI G A++G EALDLF +M + +P+
Sbjct: 319 VDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDH 377
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+TF+ VL AC+H G LE+GW +F M + Y+++P + HY+CM DLLG G+L EA + +
Sbjct: 378 ITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIM 437
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
M + D+G+WG LL +CKIH N+E+GE RL ELEP A YV ++NIYA G+W+G
Sbjct: 438 QMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEG 497
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA LR +M ++KK S + + K F D
Sbjct: 498 VAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGD 532
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 185/410 (45%), Gaps = 9/410 (2%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+ P + + ++C + +H + + F D + T +V++Y CD L A
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 110 KLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LFD++P ++ WN +I G+A G E + L+Y M G+ D T + +A
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ + +H + G + DV V I YAKC + A VF I +R V WNS+
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKIL--VRDAVLWNSM 248
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
+ + D L+ M+ G RP T+V+ +S+ AL QGR +H F
Sbjct: 249 LAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEF 308
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ V L+ MY+KCG + AR LF+ + + VSW AMI+GYA G EAL LF
Sbjct: 309 ESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEE 368
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M + PD +T + ++S C G LE G +F+ + V ++D+ G
Sbjct: 369 MNRVAK-PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSG 427
Query: 409 SIGDARELFY---ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ +A L LP+ V W ++ C ++ +++EL+
Sbjct: 428 RLDEAYNLIMQMKVLPDSGV--WGALLNSCKIHANVELGEIALERLIELE 475
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 162/363 (44%), Gaps = 46/363 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR A+ L+ +M + P+N TFPF+ KACA LS + + IH H+V
Sbjct: 144 WNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVV 203
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + D+FV ++DMYAKC + A ++FDK+ RD WN+M+ ++Q G + L
Sbjct: 204 QTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLS 263
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M L G++ T++ A+ L + +H ++ V + YA
Sbjct: 264 LCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYA 323
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +++A +F + G++ VVSWN++I G ++L+ + M +PD T
Sbjct: 324 KCGSVRVARNLFERL--GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITF 380
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-- 319
V +LS+C SHG G ++ F+ M
Sbjct: 381 VGVLSAC-------------SHG----------------------GLLEEGWMFFETMIR 405
Query: 320 ---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D T +T M+ G LDEA L M+ +PD ++++ C +E
Sbjct: 406 DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKV---LPDSGVWGALLNSCKIHANVE 462
Query: 377 LGK 379
LG+
Sbjct: 463 LGE 465
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 4/287 (1%)
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P + SLL SC+ +A+ G+ +H+ GF D + L+++Y C + SAR L
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + W +I GYA G + A++L++ M G VPD T ++ C A+
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E G+ + G + +V V ALIDMY+KCG +G ARE+F + + V W +M+A
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAY 252
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM-TKVYQVNP 494
+ NG L L +M+ LRP T + + A L +G L + ++ +
Sbjct: 253 SQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD 312
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
++ + + D+ + G ++ A + + + +K W ++ +H
Sbjct: 313 KVK--TALVDMYAKCGSVRVARNLFERLGVKRVVS-WNAMITGYAMH 356
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 297/599 (49%), Gaps = 51/599 (8%)
Query: 31 DKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK--------------LSDFLYSQMI 76
D ++ ++A LFR M +N I ++++ + C++ LS ++ Q +
Sbjct: 215 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQV 274
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +K F SD+ + +++DMYAK +D A +F MP+ V SWN MI G+ Q
Sbjct: 275 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQS 334
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K + M+ G + D +T + + A I
Sbjct: 335 SKAIEYLQRMQYHGFEPDEITYVNMLVACI------------------------------ 364
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
K D++ +F G+ ++ SWN+I+ G + + +++ +R M + P
Sbjct: 365 -----KSGDIEAGRQMFDGMSS--PSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHP 417
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TT+ +LSS L GR VH+ F D+ + + LI MYSKCG ++ A+ +F
Sbjct: 418 DRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIF 477
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + + V W +M++G + EA F M G P + +++S C + +L
Sbjct: 478 DRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLS 537
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ + G ++ V +ALIDMYSKCG + AR +F + K V+W MI G A
Sbjct: 538 QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYA 597
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
NG EA+ L+ M+ +P+ +TF+AVL AC+H+G ++ G FN M + + V P +
Sbjct: 598 QNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLV 657
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+HY+C+ D LGR G+L EA + MP K D IW LL +C+++ ++ + A LF
Sbjct: 658 DHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFH 717
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P ++APYV +ANIY+ GRWD +R +M NQV K PG S + F V+D
Sbjct: 718 LDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDD 776
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 216/478 (45%), Gaps = 55/478 (11%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
I WN+ I KAL ++ RM + P + T + AC L D + H
Sbjct: 101 NIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCH 160
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G +K ++I+V ++ MYAKC + A + F +P+ + S+ AM+ G A +
Sbjct: 161 GISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVN 220
Query: 138 KVLCLFYNMRLVGIQADFVTVM---------GLTQAAIHAKHLSLLKSVHSFGIHI---- 184
+ LF M I D V++ G + +H + L VH +H
Sbjct: 221 EAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIK 280
Query: 185 -GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS- 242
G ++D+ + N+ + YAK ++ AE++F + E +VVSWN +I G YG K S
Sbjct: 281 HGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPE--VSVVSWNVMIAG--YGQKSQSSK 336
Query: 243 -LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+ + + M Y GF PD T V++L +C+
Sbjct: 337 AIEYLQRMQYHGFEPDEITYVNMLVACI-------------------------------- 364
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
K GDI++ R +FDGM + SW ++SGY+Q + EA++LF M+ PD T
Sbjct: 365 ---KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTT 421
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ ++S LE G+ + + ++ + + LI MYSKCG + A+ +F +
Sbjct: 422 LAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIA 481
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
E +V W +M+AG +LN EA F +M E + P++ ++ VL C L +G
Sbjct: 482 ELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQG 539
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 211/475 (44%), Gaps = 82/475 (17%)
Query: 50 IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAY 109
+E + + C L ++IH H+++S D F+ +++ YAKC+ +D +
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 110 KLFDKMPDRDVASWNAMI-------------VGFAQM------------------GFLEK 138
+LFD+MP RD+ +WNA++ V FA+M GF +K
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQK 120
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L ++Y M G T+ + A + + H I IG+D ++ V N +
Sbjct: 121 ALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLG 180
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC + A F + E VS+ +++GG D+ +++ +R M+ + D
Sbjct: 181 MYAKCRCIGDAIQAFGDVPE--PNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDS 238
Query: 259 TTVVSLLSSCV---CPE-----------ALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
++ S+L C C E + V G+ VH I +GF+ D+ + N+L+ MY+
Sbjct: 239 VSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYA 298
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
K G++DSA +F M + + VSW MI+GY QK +A+ M+ G PD +T ++
Sbjct: 299 KNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVN 358
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
M+ C +SG +E G R++F + +
Sbjct: 359 MLVACIKSGDIEAG-----------------------------------RQMFDGMSSPS 383
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ SW T+++G + N EA+ LF +M + P+R T +L + LE G
Sbjct: 384 LSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGG 438
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 171/352 (48%), Gaps = 21/352 (5%)
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
D+ N + AY K ++L+ A ++F + E R +VSWN++I T +L Y
Sbjct: 70 DIYTWNAILGAYCKASELEDAHVLFAEMPE--RNIVSWNTLISALTRNGFEQKALGVYYR 127
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +GF P T+ S+LS+C + GR H I G D ++ V N L+ MY+KC
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 187
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
I A F + + VS+TAM+ G A ++EA RLF M D V++ S++
Sbjct: 188 IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGV 247
Query: 369 CGQSGALELGKWFDNYACSG--------------GLKDNVMVCNALIDMYSKCGSIGDAR 414
C + G E G N S G + ++ + N+L+DMY+K G++ A
Sbjct: 248 CSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAE 307
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F +PE +VVSW MIAG + +A++ +M P+ +T++ +L AC +G
Sbjct: 308 MIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSG 367
Query: 475 FLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
+E G F+ M+ +P L+ ++ + + KEA+ + M +S
Sbjct: 368 DIEAGRQMFDGMS-----SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS 414
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 168/376 (44%), Gaps = 18/376 (4%)
Query: 16 SSTINQWNSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
S +++ WN+ I +NE HK A+ LFR M+ + P+ T I + A + +
Sbjct: 381 SPSLSSWNT-ILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGR 439
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H K+ F +DI++ + ++ MY+KC +++ A ++FD++ + D+ WN+M+ G +
Sbjct: 440 QVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNS 499
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ F MR G+ + + LS + VHS G D V +
Sbjct: 500 LDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGS 559
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I Y+KC D+ A VF + + V+WN +I G D+++ Y MI G
Sbjct: 560 ALIDMYSKCGDVDAARWVFDMMLG--KNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGE 617
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD T V++L++C + G ++ +S +G + V +I + G + A
Sbjct: 618 KPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAE 677
Query: 314 FLFDGM-CDRTRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGEVPDLVTVLSMISGC 369
L D M C + W ++S D+ A R F ++ P V + ++ S
Sbjct: 678 VLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAP-YVLLANIYS-- 734
Query: 370 GQSGALELGKWFDNYA 385
LG+W D A
Sbjct: 735 ------SLGRWDDAKA 744
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 330/628 (52%), Gaps = 31/628 (4%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKAC-- 64
PR +K + WN+ I + A +AL LFR M + P N++TF + +C
Sbjct: 69 PRASK----RDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF----DKMPDRDV 120
A L + IHG IV + + FV+T +VD Y K LD A+++F D+ P +
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
+ +AMI Q G+ ++ L LFY M L G + VT++ + ++A + + S +F
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSV----LNACSMLPVGSATAF 240
Query: 181 GIH-----IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+ + D + T ++ YA+ NDL A F I+ VVSWN++
Sbjct: 241 VLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSP--DVVSWNAMAAAYLQ 298
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC--PE-ALVQGRLVHSHGIHYGFDLD 292
+ ++L + M+ +G RP V T ++ L++C P+ A G+ + S G + D
Sbjct: 299 HHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGD 358
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAM 350
+V N ++MY+KCG + AR +F+ + R ++W +M++ Y G EA LF AM
Sbjct: 359 TAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAM 418
Query: 351 EAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
EA V P+ VT ++++ ++ G+ S G + + ++ NAL++MY+KCGS
Sbjct: 419 EAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGS 478
Query: 410 IGDARELF--YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ DA+ +F + ++ V++WT+++AG A G+ AL LF M + +RPN +TF++ L
Sbjct: 479 LDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISAL 538
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC H G LE+G + MT + + P H+SC+ DLLGR G+L EA ++ ++D
Sbjct: 539 TACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QAD 597
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTM 587
W LL ACK + +E GE A R+ +L+P A+ Y+ +A++YA GRW+ A +R
Sbjct: 598 VITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKT 657
Query: 588 MKRNQVKKFPGQSLVHINGKTCTFTVED 615
M ++ PG S V +N + +F+ D
Sbjct: 658 MLDKGIRADPGCSAVEVNQELHSFSAGD 685
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 216/446 (48%), Gaps = 15/446 (3%)
Query: 49 DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
++ PN + AC+ L + + IH I F + + ++ MY+KC L A
Sbjct: 2 EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61
Query: 109 YKLFDKMP---DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI-QADFVTVMGLTQA 164
+ FD++P RDV +WNAMI F + G + L LF +M G + VT + + +
Sbjct: 62 KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121
Query: 165 AIHAKHLSL--LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--RGIEEGL 220
+ A LSL ++++H + G++ + V + +Y K L A VF + EE
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC-VCPEALVQGRL 279
++V+ +++I C +SL + M +G +P T+VS+L++C + P +
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
+ D + TL++ Y++ D+ AR FD + VSW AM + Y Q
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301
Query: 340 LDEALRLFFAMEAAGEVPDLVTVLSMISGCG---QSGALELGKWFDNYACSGGLKDNVMV 396
EAL LF M G P + T ++ ++ C A +GK + GL+ + V
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361
Query: 397 CNALIDMYSKCGSIGDARELFYALP--EKTVVSWTTMIAGCALNGEFVEALDLFHQM-ME 453
NA ++MY+KCGS+ DAR +F + + ++W +M+A +G EA +LF M E
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 421
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKG 479
++PN+VTF+AVL A T + +G
Sbjct: 422 KLVKPNKVTFVAVLDASTSRTSIAQG 447
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 199/622 (31%), Positives = 316/622 (50%), Gaps = 67/622 (10%)
Query: 55 LTFPFIAKACAKLSDFLYS----------QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
+ FPF +++ S FL+S + +HGH K + ++ +Y K
Sbjct: 24 VNFPFHSRSRQPCS-FLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSN 82
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQM-GFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
LD A+KLFD++ ++ +W +I GFA+ G E V LF M+ G + T+ + +
Sbjct: 83 LDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLK 142
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
++ K +H++ + GV DV + N+ + Y KC + + AE F + E + V
Sbjct: 143 CCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIE--KDV 200
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHM----------IYDG-------------------- 253
VSWN +IG + SL +R+ I DG
Sbjct: 201 VSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAH 260
Query: 254 ---FRPDVTTVVSLLSSCVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
F P ++ +L S + +LV+ GR +H + +G + D + ++L+ MY KCG +
Sbjct: 261 GTEFSPVTFSIALILVSSL---SLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRM 317
Query: 310 DSA---------RFLFDG----MCDRTR---VSWTAMISGYAQKGDLDEALRLFFAMEAA 353
D A FL G C + VSW++M+SGY G ++ ++ F +M
Sbjct: 318 DKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCE 377
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
V D+ TV ++IS C +G LE GK Y GL+ + V ++LIDMYSK GS+ DA
Sbjct: 378 LIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDA 437
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+F + E VV WT+MI+GCAL+G+ EA+ LF M+ L + PN VTF+ VL AC+H
Sbjct: 438 LMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHV 497
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G +E+G YF +M Y +NPE+ HY+ M +L GR G L EA +F+ I +W +
Sbjct: 498 GLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRS 557
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
L +C++H+N +G+ V+ L + P Y+ ++N+ + +WD A +R++M + V
Sbjct: 558 FLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGV 617
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
KK PGQS V + + +FTV D
Sbjct: 618 KKQPGQSWVQLKDQIHSFTVGD 639
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 215/449 (47%), Gaps = 49/449 (10%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
LFR M+ + PN T + K C++ ++ + + IH I+++ D+ ++ +++D+Y
Sbjct: 121 LFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYL 180
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
KC + A F+ M ++DV SWN MI + + G +EK L +F N + + + G
Sbjct: 181 KCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDG 240
Query: 161 LTQ----------------------------AAIHAKHLSLL---KSVHSFGIHIGVDAD 189
L Q A I LSL+ + +H + G+++D
Sbjct: 241 LIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSD 300
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGI--------------EEGLRTVVSWNSIIGGCTY 235
+ ++ + Y KC + A + + + +E +VSW+S++ G +
Sbjct: 301 GYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVW 360
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
K++D + +R M+ + D+ TV +++S+C L G+ +H++ G +D V
Sbjct: 361 NGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYV 420
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
++LI MYSK G +D A +F+ + + V WT+MISG A G EA+ LF M G
Sbjct: 421 GSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGI 480
Query: 356 VPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
+P+ VT + +++ C G +E G ++F + + V +++++Y + G + +A+
Sbjct: 481 IPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAK 540
Query: 415 ELFY--ALPEKTVVSWTTMIAGCALNGEF 441
+ ++ T V W + ++ C L+ F
Sbjct: 541 NFIFENSISHFTSV-WRSFLSSCRLHKNF 568
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 145/329 (44%), Gaps = 20/329 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + AL M + E + +TF + LS + +HG ++
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVL 293
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD----------------KMPDRDVASWNA 125
SD ++++++V+MY KC R+D A + K P + SW++
Sbjct: 294 TFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSS 353
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
M+ G+ G E + F +M I D TV + A +A L K +H++ IG
Sbjct: 354 MVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIG 413
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+ D V ++ I Y+K L A ++F I+E VV W S+I GC + ++++
Sbjct: 414 LRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEP--NVVLWTSMISGCALHGQGKEAISL 471
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYS 304
+ M+ G P+ T V +L++C + +G R Y + +V +++++Y
Sbjct: 472 FEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYG 531
Query: 305 KCGD-IDSARFLFDGMCDRTRVSWTAMIS 332
+ G I++ F+F+ W + +S
Sbjct: 532 RAGHLIEAKNFIFENSISHFTSVWRSFLS 560
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 3/227 (1%)
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G C K NF H++ F S L S + R +H H G
Sbjct: 7 GSCRKFTKHVSVTNF--HIVNFPFHSRSRQPCSFLHSTTSIGSPPSLRALHGHYFKKGSL 64
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK-GDLDEALRLFFA 349
++ N L+++Y K ++D A LFD + + +WT +ISG+A+ G + LF
Sbjct: 65 QILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFRE 124
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M+A G P+ T+ S++ C + ++ GK + G+ +V++ N+++D+Y KC
Sbjct: 125 MQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKE 184
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
A F + EK VVSW MI G+ ++L++F D+
Sbjct: 185 FEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDV 231
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 16/227 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+S + V + + FR M I + T I ACA + + IH +I
Sbjct: 351 WSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQ 410
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D +V ++++DMY+K LD A +F+++ + +V W +MI G A G ++ +
Sbjct: 411 KIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAIS 470
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDADVSVCN 194
LF M +GI + VT +G+ A H ++ ++K + ++ +V
Sbjct: 471 LFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYH------INPEVEHYT 524
Query: 195 TWISAYAKCNDLKMAE-LVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ ++ Y + L A+ +F +V W S + C F+
Sbjct: 525 SMVNLYGRAGHLIEAKNFIFENSISHFTSV--WRSFLSSCRLHKNFN 569
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 300/553 (54%), Gaps = 6/553 (1%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
CAK+ FL+ +H +K+ SDI V ++++Y+KC + A ++FD+M DR++ SW
Sbjct: 13 CAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSW 72
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
+A+I G+ Q G L LF MR+V + F +V+ A LS VH+ +
Sbjct: 73 SAIISGYDQTGQPLLALNLFSQMRIVPNEYVFASVI---SACASLTALSQGLQVHAQSLK 129
Query: 184 IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
+G + V N IS Y KC A LV + E VS+N++I G + + +
Sbjct: 130 LGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSE--PNAVSYNALIAGFVENQQPEKGI 187
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
++ M GF PD T LL C + +G +H I + + N +I+MY
Sbjct: 188 EAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMY 247
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTV 362
SK I+ A +F + ++ +SW +++ D + ALR+F M V PD T
Sbjct: 248 SKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTF 307
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+++ C ++ GK + +V V NAL++MY+KCGSI ++ ++F +
Sbjct: 308 AGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSD 367
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+ +VSW T+IA +G AL+ F +M + + P+ VTF+ +L AC HAG +E+G Y
Sbjct: 368 RNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVY 427
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
FN M + Y + P + H+SC+ DLLGR G+L+EA ++++ +P D I G+LL AC++H
Sbjct: 428 FNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHG 487
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
++ IGE++A +L +L+P + +PYV ++N+YA W GVA M+K + +KK PG SL+
Sbjct: 488 DMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPGHSLI 547
Query: 603 HINGKTCTFTVED 615
+ G FT+ D
Sbjct: 548 DVMGMFEKFTMGD 560
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 208/437 (47%), Gaps = 8/437 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I + AL LF +M+ I PN F + ACA L+ +H +
Sbjct: 72 WSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQSL 128
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S FV ++ MY KC A + + M + + S+NA+I GF + EK +
Sbjct: 129 KLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIE 188
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F MR G D T GL +H I + ++ + N I+ Y+
Sbjct: 189 AFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYS 248
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF-RPDVTT 260
K N ++ AE VF I+E + ++SWN+++ C + + +L +R M+ F +PD T
Sbjct: 249 KFNLIEEAEKVFGLIKE--KDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFT 306
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+L++C ++ G+ +H H I DV V N L++MY+KCG I ++ +F
Sbjct: 307 FAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTS 366
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK- 379
DR VSW +I+ + G AL F M+ G PD VT + +++ C +G +E G+
Sbjct: 367 DRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQV 426
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+F++ + G+ N+ + LID+ + G + +A E LP + ++++ C L+
Sbjct: 427 YFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLH 486
Query: 439 GEFVEALDLFHQMMELD 455
G+ V L Q+++L
Sbjct: 487 GDMVIGEHLATQLLKLQ 503
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 132/277 (47%), Gaps = 7/277 (2%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL C +A + G +H+ + G D+ V N +I++YSKCG++ AR +FD M DR
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSW+A+ISGY Q G AL LF M VP+ S+IS C AL G
Sbjct: 68 NLVSWSAIISGYDQTGQPLLALNLFSQMRI---VPNEYVFASVISACASLTALSQGLQVH 124
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+ G V NALI MY KCG DA + + E VS+ +IAG N +
Sbjct: 125 AQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPE 184
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY-SC 501
+ ++ F M + P+R TF +L CT + W L ++ ++N E + +
Sbjct: 185 KGIEAFKVMRQKGFAPDRFTFSGLLGICTS---YDDFWRGMQLHCQMIKLNLEDSAFIGN 241
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ + K L E + V + + D W TL+ AC
Sbjct: 242 VIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTAC 278
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 178/509 (34%), Positives = 275/509 (54%), Gaps = 11/509 (2%)
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
D + +V ++NA+I GF GF E+ + MR G+ D T +A + +
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 155
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
K +H G++ DV + + ++ Y K ++ A++ F E +R VV WN+++ G
Sbjct: 156 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE--ELPIRDVVLWNAMVNG 211
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
+F+ L +R M + P TV LS L GR++H + G+D
Sbjct: 212 YAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSG 271
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
V+V N+LI MY KC I+ A +F+ M ++ SW +++S + Q GD D LRL M
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLG 331
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDMYSK 406
AG PDLVTV +++ C AL G+ Y GL D+V++ NA+IDMY+K
Sbjct: 332 AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAK 391
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAV 466
CGS+ DA +F + K V SW MI G ++G EAL++F +M E+ L+P+ VTF+ V
Sbjct: 392 CGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGV 451
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
L AC+HAGF+ +G + M Y V P + HY+C+ D+LGR G+L EA + +MPI++
Sbjct: 452 LSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEA 511
Query: 527 DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRT 586
+ +W LL AC++H++ + E A R+FELEP YV M+N+Y GR++ V +R
Sbjct: 512 NPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRH 571
Query: 587 MMKRNQVKKFPGQSLVHINGKTCTFTVED 615
M++ V+K PG S + + F D
Sbjct: 572 TMRQQNVRKTPGCSWIELKNGVHVFVSAD 600
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 213/442 (48%), Gaps = 13/442 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I + + +++M+ + P+ TFP KAC D L + IHG +
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL---DVLEIKKIHGLLF 163
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D+F+ + +V+ Y K ++ A F+++P RDV WNAM+ G+AQ+G E VL
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 223
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + TV G L+ + +H F + +G D+ V+V N+ I Y
Sbjct: 224 TFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F + E + + SWNSI+ D +L M+ G +PD+ TV
Sbjct: 284 KCKCIEDALEIFEMMRE--KDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGF-----DL-DVSVINTLISMYSKCGDIDSARFL 315
++L +C AL+ GR +H + I G D+ DV + N +I MY+KCG + A +
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M ++ SW MI GY G +EAL +F M PD VT + ++S C +G +
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 461
Query: 376 ELGKWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIA 433
G+ F + + +IDM + G + +A EL +P E V W ++A
Sbjct: 462 SQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 521
Query: 434 GCALNGEFVEALDLFHQMMELD 455
C L+ V A ++ EL+
Sbjct: 522 ACRLHKHAVLAEVAAQRVFELE 543
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
++ R I WNS + + L L RM I+P+ +T + AC+ L+ +
Sbjct: 296 EMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALM 355
Query: 72 YSQMIHGHIVKSPFWS------DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+ + IHG+++ S D+ ++ ++DMYAKC + A+ +F++M ++DVASWN
Sbjct: 356 HGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNI 415
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
MI+G+ G+ + L +F M V ++ D VT +G+ A HA +S
Sbjct: 416 MIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 462
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 296/587 (50%), Gaps = 49/587 (8%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H VK+ + ++ +YAK + + A KLFD++P R+ +W +I GFA+ G
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E V LF M+ G + T+ + + +L L K VH++ + G+D DV + N+
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y KC + AE +F + EG VVSWN +IG + SL+ +R + Y
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEG--DVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVV 488
Query: 256 PDVTTVVSLLSSCVCPEALVQ-------------------------------GRLVHSHG 284
T V LL AL Q GR +H
Sbjct: 489 SWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMV 548
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLF-DGMCDRTR---------------VSWT 328
+ +GFD D + ++L+ MY KCG +D A + D D R VSW
Sbjct: 549 LKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWG 608
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
+M+SGY G ++ L+ F M V D+ TV ++IS C +G LE G+ Y
Sbjct: 609 SMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKI 668
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
G + + V ++LIDMYSK GS+ DA +F E +V WT+MI+G AL+G+ + A+ LF
Sbjct: 669 GHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLF 728
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
+M+ + PN VTFL VL AC+HAG +E+G YF +M Y +NP + H + M DL GR
Sbjct: 729 EEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGR 788
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEM 568
G L + +F+ I +W + L +C++H+N+E+G++V+ L ++ P YV +
Sbjct: 789 AGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLL 848
Query: 569 ANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+N+ A RWD A +R++M + VKK PGQS + + + TF + D
Sbjct: 849 SNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGD 895
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 208/449 (46%), Gaps = 55/449 (12%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
LFR M+ PN T + K C+ ++ + +H ++++ D+ + +++D+Y
Sbjct: 377 LFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYL 436
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
KC + A +LF+ M + DV SWN MI + + G +EK L +F + + + V G
Sbjct: 437 KCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDG 496
Query: 161 LTQAAI--HA-----------------------------KHLSLLKSVHSFGIHIGVDAD 189
L Q HA H+ L + +H + G D+D
Sbjct: 497 LLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSD 556
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGI--------------EEGLRTVVSWNSIIGGCTY 235
+ ++ + Y KC + A ++ R + +E +VSW S++ G +
Sbjct: 557 GFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVW 616
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
K++D L +R M+ + D+ TV +++S+C L GR VH++ G +D V
Sbjct: 617 NGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYV 676
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
++LI MYSK G +D A +F + V WT+MISGYA G A+ LF M G
Sbjct: 677 GSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGI 736
Query: 356 VPDLVTVLSMISGCGQSGALELG-KWF----DNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+P+ VT L +++ C +G +E G ++F D Y + G++ C +++D+Y + G +
Sbjct: 737 IPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEH----CTSMVDLYGRAGHL 792
Query: 411 GDARELFYALPEKTVVS-WTTMIAGCALN 438
+ + + S W + ++ C L+
Sbjct: 793 TKTKNFIFKNGISHLTSVWKSFLSSCRLH 821
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 147/373 (39%), Gaps = 51/373 (13%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDI------------------ 50
RL ++ + WN I + + K+L +FRR+ D+
Sbjct: 446 RLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERH 505
Query: 51 -------------EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
E + +TF + LS + +HG ++K F SD F+++++V+
Sbjct: 506 ALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVE 565
Query: 98 MYAKCDRLDCAYKLFD----------------KMPDRDVASWNAMIVGFAQMGFLEKVLC 141
MY KC R+D A + K P + SW +M+ G+ G E L
Sbjct: 566 MYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLK 625
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M + D TV + A +A L + VH++ IG D V ++ I Y+
Sbjct: 626 TFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYS 685
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L A +VFR E +V W S+I G + ++ + M+ G P+ T
Sbjct: 686 KSGSLDDAWMVFRQSNE--PNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTF 743
Query: 262 VSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR-FLFDGM 319
+ +L++C + +G R Y + V +++ +Y + G + + F+F
Sbjct: 744 LGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNG 803
Query: 320 CDRTRVSWTAMIS 332
W + +S
Sbjct: 804 ISHLTSVWKSFLS 816
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I W S + V + L FR M + + + T I ACA + + +H
Sbjct: 604 IVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHA 663
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++ K D +V ++++DMY+K LD A+ +F + + ++ W +MI G+A G
Sbjct: 664 YVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMH 723
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDADVS 191
+ LF M GI + VT +G+ A HA ++ ++K + ++ V
Sbjct: 724 AIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYC------INPGVE 777
Query: 192 VCNTWISAYAKCNDL-KMAELVFRGIEEGLRTVVSWNSIIGGC 233
C + + Y + L K +F+ L +V W S + C
Sbjct: 778 HCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSV--WKSFLSSC 818
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 304/573 (53%), Gaps = 14/573 (2%)
Query: 52 PNNLTFPFIAKACAKLSDFLY---SQMIHGHIVKSPFW-SDIFVQTTMVDMYAKCDRLDC 107
PN F +AC + L+ + +HG+ +++ + + V +++MYAKC +D
Sbjct: 99 PNRFAFGSAIRACQE--SMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDH 156
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMGLTQAAI 166
A +F M D+D SWN+MI G Q E + + +MR G+ ++F + L+ A
Sbjct: 157 ARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCAS 216
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
L L + H GI +G+D DVSV NT ++ YA+ + L + VF + E R VSW
Sbjct: 217 LGCIL-LGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLE--RDQVSW 273
Query: 227 NSIIGGCT-YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
N++IG G +++ + M+ G+ P+ T ++LL++ +H+ +
Sbjct: 274 NTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALIL 333
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT-RVSWTAMISGYAQKGDLDEAL 344
Y D ++ N L++ Y K G++++ +F M +R VSW +MISGY L +A+
Sbjct: 334 KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAM 393
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
L + M G+ D T +++S C LE G A L+ +V++ +AL+DMY
Sbjct: 394 DLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMY 453
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKCG I A F +P + + SW +MI+G A +G AL LF +M P+ +TF+
Sbjct: 454 SKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFV 513
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
VL AC+H G +++G+ YF MT+VY + P + HYSCM DLLGR G+L + +F+ MPI
Sbjct: 514 GVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPI 573
Query: 525 KSDAGIWGTLLCAC--KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
K + IW T+L AC R E+G A LF ++P +A YV ++N+YA GG+W+ +A
Sbjct: 574 KPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMA 633
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R M+ VKK G S V + F D
Sbjct: 634 RTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGD 666
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 228/462 (49%), Gaps = 15/462 (3%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ + H +++K F SD+F+ T++++Y + A KLFD+MPDR+ +W +I G+ Q
Sbjct: 19 ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-----KSVHSFGIHIGV- 186
G E + M G F+ +AI A S+L + VH + I G+
Sbjct: 79 NGMPEDACGVLKEMIFEG----FLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLN 134
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
DA V+V N I+ YAKC D+ A VF + + + VSWNS+I G F+D++ Y
Sbjct: 135 DAKVAVGNGLINMYAKCGDIDHARSVFGLMVD--KDSVSWNSMITGLDQNKCFEDAVKSY 192
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M G P ++S LSSC ++ G+ H GI G D+DVSV NTL+++Y++
Sbjct: 193 NSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAET 252
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKG-DLDEALRLFFAMEAAGEVPDLVTVLSM 365
+ + +F M +R +VSW +I A G + EA+ +F M AG P+ VT +++
Sbjct: 253 SRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINL 312
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT- 424
++ +L +KD+ + NAL+ Y K G + + E+F + E+
Sbjct: 313 LATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRD 372
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
VSW +MI+G N +A+DL MM+ R + TF VL AC LE G
Sbjct: 373 EVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHA 432
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
+ + ++ S + D+ + G++ A F MP+++
Sbjct: 433 CAIRAC-LESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRN 473
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 206/428 (48%), Gaps = 7/428 (1%)
Query: 21 QWNSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS I +D+N+ + A+ + M+K + P+N +CA L L Q HG
Sbjct: 171 SWNSMI-TGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGE 229
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF-LEK 138
+K D+ V T++ +YA+ RL K+F M +RD SWN +I A G + +
Sbjct: 230 GIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSE 289
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ +F M G + VT + L L +H+ + V D ++ N ++
Sbjct: 290 AIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLA 349
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y K +++ E +F + E R VSWNS+I G + + +++ M+ G R D
Sbjct: 350 CYGKSGEMENCEEIFSRMSE-RRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDC 408
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T ++LS+C L G VH+ I + DV + + L+ MYSKCG ID A F+
Sbjct: 409 FTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNL 468
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R SW +MISGYA+ G D ALRLF M+ +G++PD +T + ++S C G ++ G
Sbjct: 469 MPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 528
Query: 379 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCA 436
++F + GL V + ++D+ + G + +P K ++ W T++ C
Sbjct: 529 FEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACC 588
Query: 437 L-NGEFVE 443
NG E
Sbjct: 589 RGNGRKTE 596
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 309/619 (49%), Gaps = 64/619 (10%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK--------- 110
+ K C + +F ++ +H HI+K+ + + F+ ++ YAK + A K
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 111 ----------------------LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRL 148
LFD MP RD SWN++I G+A G + + + YN+ L
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKA-YNLML 133
Query: 149 V---GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
+ +T L A + L + +H + G + V V + + Y+K
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193
Query: 206 LKMAELVFRGIEE-----------GL------------------RTVVSWNSIIGGCTYG 236
+ A VF + E GL R +SW S+I G T
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D+++ +R M + + D T S+L++C AL +G+ VH++ I + ++ V
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+ L+ MY KC +I SA +F M + VSWTAM+ GY Q G +EA++ F M+ G
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
PD T+ S+IS C +LE G F A + GL + V NAL+ +Y KCGSI D+ L
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F + K V+WT +++G A G+ E + LF M+ L+P++VTF+ VL AC+ AG +
Sbjct: 434 FNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLV 493
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
EKG F M + + P +HY+CM DL R G+++EA +F+ MP DA W TLL
Sbjct: 494 EKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
+C+ + N++IG++ A L EL+PH+ A YV ++++YA G+W+ VA LR M+ ++K
Sbjct: 554 SCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKE 613
Query: 597 PGQSLVHINGKTCTFTVED 615
PG S + + F+ +D
Sbjct: 614 PGCSWIKYKNQVHVFSADD 632
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 224/469 (47%), Gaps = 37/469 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
WNS I ++++ + M KND N +TF + +K + IHGH
Sbjct: 109 WNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGH 168
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP----------------------- 116
+VK F S +FV + +VDMY+K + CA K+FD++P
Sbjct: 169 VVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDS 228
Query: 117 --------DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+RD SW +MI GF Q G + +F M+L +Q D T + A
Sbjct: 229 KRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGV 288
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L K VH++ I ++ V + + Y KC ++K AE VF+ + + VVSW +
Sbjct: 289 MALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMT--CKNVVSWTA 346
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
++ G ++++ + M G PD T+ S++SSC +L +G H+ + G
Sbjct: 347 MLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSG 406
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
++V N L+++Y KCG I+ + LF+ + + V+WTA++SGYAQ G +E + LF
Sbjct: 407 LISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFE 466
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKC 407
+M A G PD VT + ++S C ++G +E G + F++ G+ +ID++S+
Sbjct: 467 SMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRA 526
Query: 408 GSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
G I +AR +P +SW T+++ C G +MELD
Sbjct: 527 GRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELD 575
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 120/281 (42%), Gaps = 64/281 (22%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA---------- 312
+LL C + + +HSH I + ++N LIS Y+K G I A
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73
Query: 313 ---------------------RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
+LFD M R VSW ++ISGYA G + ++++ + M
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 352 AAGEVPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
+L +T +++ + G ++LG+ + G V V + L+DMYSK G
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193
Query: 410 IGDARELFYALPEKTVV-------------------------------SWTTMIAGCALN 438
I AR++F LPEK VV SWT+MI G N
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
G +A+D+F +M +L+ ++ TF +VL AC L++G
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEG 294
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 293/554 (52%), Gaps = 9/554 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + + L RM+++ + P +T+ + AC+ D + IH +V
Sbjct: 185 WNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVV 244
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D V++ ++ MY KC L+ + ++ +R+ +WN +I +A+ + L
Sbjct: 245 DMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALR 304
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+L G++AD VT + + HL+ +H + +G ++ + V N+ + YA
Sbjct: 305 SFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVHNSLTAMYA 363
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A +F G+ R VSWNS+I + D+ F++ M +G RPD T
Sbjct: 364 KCGSLDAARKMFEGMPS--RNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTC 421
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S+L +C +G +H + GFD V N LI MY+K GD ++AR +FD M +
Sbjct: 422 ISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAE 481
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC-GQSGALELGKW 380
R VSW +++ Y +KG +A+ +F+ M+ A D VT ++ + C G +G L GK
Sbjct: 482 RNTVSWNTILAAYVEKGLNRDAVEMFWKMDVA---RDKVTYVAALDACSGLAGGLAHGKL 538
Query: 381 FDNYACSGGLKD--NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
Y G + + + AL++MY KCGS+ +AR++F + + VV+WT++I A +
Sbjct: 539 IHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSLIVAYAQH 598
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
E +AL L M + ++ + V FL++L C H+G LE+G YF M Y ++P L H
Sbjct: 599 SEIEQALKLVKIMEQDGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEH 658
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ D+LGR G L A V +P +SD+ +W TLL AC++H N E G+ A R+ L+
Sbjct: 659 YNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLLD 718
Query: 559 PHSAAPYVEMANIY 572
P A YV ++NIY
Sbjct: 719 PSIPAAYVVLSNIY 732
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/516 (32%), Positives = 261/516 (50%), Gaps = 19/516 (3%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+++LLFR+M+ I PN +T + +AC L+D + +HG+++++ D +
Sbjct: 101 GRESVLLFRKMELEGIRPNLITMVAVLRAC-NLTD---GRQVHGYVLEAGMSLDTSLGNA 156
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
+VDMY K +D A + +MP RDV SWN MI G+AQ G ++ L + M+ G+
Sbjct: 157 LVDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPT 216
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
VT L A + L KS+H + +G+D D V + + Y KC L+ +
Sbjct: 217 KVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSC 276
Query: 215 GIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
+ E R ++WN+IIG Y D F +L ++ M G + D T V +L +C P
Sbjct: 277 EVHE--RNTIAWNTIIGAYARYSDHF-QALRSFQQMQLQGVKADAVTFVLMLGTCSSPAH 333
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
L QG L+H GF+ + V N+L +MY+KCG +D+AR +F+GM R VSW ++IS
Sbjct: 334 LAQGILLHDWISQLGFE-SIIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISA 392
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
Q G +A + F M+ G PD VT +SM+ C + + G G
Sbjct: 393 AIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKR 452
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V NALI MY+K G AR +F A+ E+ VSW T++A G +A+++F +M
Sbjct: 453 TGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM-- 510
Query: 454 LDLRPNRVTFLAVLQACTH-AGFLEKG---WGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
D+ ++VT++A L AC+ AG L G GY ++ + + + + ++ G+
Sbjct: 511 -DVARDKVTYVAALDACSGLAGGLAHGKLIHGY--MLDHGFSNRLDTVAATALVNMYGKC 567
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
G L+EA M + D W +L+ A H IE
Sbjct: 568 GSLQEARKIFDEM-LHRDVVTWTSLIVAYAQHSEIE 602
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 232/445 (52%), Gaps = 10/445 (2%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL L++RM+ + P+++TF +AC + +H +I +S +DI+ ++
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL--EKVLCLFYNMRLVGIQAD 154
+MY KC + A++LF +M +V SW ++I FAQ G L E VL LF M L GI+ +
Sbjct: 61 NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVL-LFRKMELEGIRPN 119
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+T++ A + A +L+ + VH + + G+ D S+ N + Y K D+ A+LV R
Sbjct: 120 LITMV----AVLRACNLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLR 175
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
+ + R V+SWN +I G + L M DG P T +LL++C E L
Sbjct: 176 EMPK--RDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDL 233
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+G+ +H + G D D V + L+ MY KCG ++ + + +R ++W +I Y
Sbjct: 234 GEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAY 293
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
A+ D +ALR F M+ G D VT + M+ C L G ++ G +++
Sbjct: 294 ARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF-ESI 352
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+V N+L MY+KCGS+ AR++F +P + VSW ++I+ +G + +A F +M
Sbjct: 353 IVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLE 412
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKG 479
RP+ VT +++L ACT ++G
Sbjct: 413 GSRPDEVTCISMLDACTKQANAKEG 437
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 198/405 (48%), Gaps = 10/405 (2%)
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L L+ M+L G++ D VT + +A L + VH++ G++ D+ N I
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y KC + A +F +E VVSW S+IG YG +S+ +R M +G RP
Sbjct: 61 NMYGKCRSPEDAFQLFSRMESP--NVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRP 118
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
++ T+V++L +C L GR VH + + G LD S+ N L+ MY K GD+D A +
Sbjct: 119 NLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVL 174
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
M R +SW MISGYAQ GD E LR + M+ G P VT ++++ C L
Sbjct: 175 REMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLG 234
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK GL + +V + L+ MY KCGS+ D + + E+ ++W T+I A
Sbjct: 235 EGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYA 294
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+ +AL F QM ++ + VTF+ +L C+ L +G + ++++ +
Sbjct: 295 RYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQL-GFESII 353
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
H S A + + G L A + MP ++ W +L+ A H
Sbjct: 354 VHNSLTA-MYAKCGSLDAARKMFEGMPSRNSVS-WNSLISAAIQH 396
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 297/562 (52%), Gaps = 34/562 (6%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR-LDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H + + S ++ + + ++ YA L A+K+FD++ WN +I G AQ
Sbjct: 470 KRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ 529
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ + + G+ D +T + +A L+ + +H+ +G+ +D+ V
Sbjct: 530 SDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFV 589
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ I YA C +L A VF E ++ VVSWNS+I G + ++F D L ++ M +
Sbjct: 590 SNSLIHLYAACGNLCYARSVFD--EMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNE 647
Query: 253 GFRPDVTTVVSLLSSCV------------------CPEALV------------QGRLVHS 282
G + D T++ ++S+C C E V +G+L +
Sbjct: 648 GVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSA 707
Query: 283 HGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ + + ++ +N +I+ Y+K DI SAR +FD + + +SW++MISGY+Q
Sbjct: 708 EKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFS 767
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
+AL +F M+ A PD + + S++S C GAL+LGKW Y +K + ++ N+LI
Sbjct: 768 DALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLI 827
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY KCGS +A ++F + EK +SW ++I G A NG E+L+LF M+ RPN V
Sbjct: 828 DMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGV 887
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
TFL VL AC +A +E+G +F M ++Y + P++ HY C+ DLLGR G+L++AL F+
Sbjct: 888 TFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITE 947
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MPI D +W LL +C H ++ I E V +L ELEP ++ Y ++N YA RW
Sbjct: 948 MPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEA 1007
Query: 582 ANLRTMMKRNQVKKFPGQSLVH 603
N+R M V+K PG S V
Sbjct: 1008 MNVRQCMADTDVRKSPGCSAVE 1029
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 209/412 (50%), Gaps = 40/412 (9%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC---PEALVQG 277
R W++++ ++G D+L +RH + D L +C P +Q
Sbjct: 53 RRPTPWHALLKAYSHGPHPQDALQLFRHARWHA-ADDTYAFTFALKACAGLGWPRCCMQ- 110
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCG------------------------------ 307
+H + GF+ V L+++Y CG
Sbjct: 111 --LHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGW 168
Query: 308 -DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
+++ AR LF+ M R VSW+ MI GY + EA+ LF M A G P +TVL+++
Sbjct: 169 GEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVV 228
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKTV 425
G + +G+ Y GL +V V N+LID+Y+K GSI ++ +F L + +
Sbjct: 229 PALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNL 288
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSWT++I+G A++G V+A++LF M +RPNR+TFL+VL AC+H G +E+G +F
Sbjct: 289 VSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKS 348
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M Y +NP++ H+ C+ D+LGR G+L+EA ++ P++ +A +W TLL C + +E
Sbjct: 349 MIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVE 408
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM-KRNQVKKF 596
+GE ++ LE +V ++N+ R+ +R ++ +RN VK F
Sbjct: 409 MGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSF 460
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 223/467 (47%), Gaps = 35/467 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + A+ +++ + + P+NLTFPFI KACA+++ + +H HI
Sbjct: 520 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 579
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K SDIFV +++ +YA C L A +FD+M +DV SWN++I G++Q + +L
Sbjct: 580 KLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILA 639
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIGV----------- 186
LF M+ G++AD VT++ + A S +++ + + I + V
Sbjct: 640 LFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFG 699
Query: 187 ----------------DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
++ N I+AYAK D+ A +F I + + ++SW+S+I
Sbjct: 700 RRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPK--KDLISWSSMI 757
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G + + F D+L +R M +PD + S++SSC AL G+ VH +
Sbjct: 758 SGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIK 817
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D + N+LI MY KCG A +F M ++ +SW ++I G A G E+L LF AM
Sbjct: 818 ADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAM 877
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
G P+ VT L ++ C + +E G F++ L+ + ++D+ + G
Sbjct: 878 LTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQ 937
Query: 410 IGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ A +P + V W ++ C +G+ A + ++ EL+
Sbjct: 938 LEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELE 984
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 149/581 (25%), Positives = 254/581 (43%), Gaps = 80/581 (13%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA-----KLSDFLYSQMI 76
W S I + KA+ LF M++ I PN +TF + AC+ + + MI
Sbjct: 291 WTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMI 350
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMI-----VGF 130
+ + + D+ ++DM + RL A ++ P + + W ++ G
Sbjct: 351 YEYNIN----PDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGE 406
Query: 131 AQMG--FLEKVLCLFYNMRLVGIQADFVTVMGL-------TQAAIHAKHLSLLKSVHSFG 181
+MG ++K+L L R G DFV + + + A I K + SV SF
Sbjct: 407 VEMGERTMKKILAL---EREFG--GDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSFF 461
Query: 182 IHIGVDADVSVCNTWI-SAYAKCN---------------DLKMAELVFRGIEEGLRTVVS 225
+ ++A + +I S C+ DL A VF IE T
Sbjct: 462 NIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAP--TTFL 519
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
WN +I G D D++ FY+ G PD T +L +C AL +G +H+H
Sbjct: 520 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 579
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
G D+ V N+LI +Y+ CG++ AR +FD M + VSW ++I GY+Q + L
Sbjct: 580 KLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILA 639
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF--------------------DNYA 385
LF M+ G D VT++ ++S C + G + + D +
Sbjct: 640 LFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFG 699
Query: 386 CSGGLKD-----------NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
G L+ N++ NA+I Y+K I AR++F +P+K ++SW++MI+G
Sbjct: 700 RRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISG 759
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
+ F +AL++F QM ++P+ + +V+ +C H G L+ G + + + +
Sbjct: 760 YSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLG-KWVHEYVRRNNIKA 818
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + + D+ + G KEAL + M K D W +++
Sbjct: 819 DTIMENSLIDMYMKCGSAKEALQVFKEMKEK-DTLSWNSII 858
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 241/524 (45%), Gaps = 43/524 (8%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ LFRRM I P+ +T + A + + L + +HG+ K D+ V +++
Sbjct: 204 EAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLI 263
Query: 97 DMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
D+YAK + + ++FD+M D R++ SW ++I GFA G K + LF +MR GI+ +
Sbjct: 264 DLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNR 323
Query: 156 VTVMGLTQAAIHA----KHLSLLKS-VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+T + + A H + ++ KS ++ + I + DV I + L+ AE
Sbjct: 324 ITFLSVLHACSHGGLVEQGVAFFKSMIYEYNI----NPDVKHFGCIIDMLGRAGRLREAE 379
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCT-YGD----------------KFDDSLNFYRHMIYDG 253
+ R + V W +++G C+ YG+ +F +M+ +
Sbjct: 380 QIIRDFPVEVNATV-WRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTEL 438
Query: 254 FR-PDVTTVVSLLS---------SCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISM 302
R D V L+ + V EA+ + +H++ I G ++ ++ L S
Sbjct: 439 RRFSDAEIVRKLVDQRNSVKSFFNIVRMEAI---KRLHAYYIVSGLYNCHYAMSKVLRSY 495
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
D+ A +FD + T W +I G AQ +A+ + + G VPD +T
Sbjct: 496 AILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTF 555
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
++ C + AL G+ N+ GL ++ V N+LI +Y+ CG++ AR +F +
Sbjct: 556 PFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVV 615
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
K VVSW ++I G + F + L LF M ++ ++VT + V+ ACT G Y
Sbjct: 616 KDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA-DY 674
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
+ Y + ++ + + D GR+G+L+ A +M +++
Sbjct: 675 MVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRN 718
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 129/250 (51%), Gaps = 5/250 (2%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ +A +++ A L+F + R VVSW+ +I G T + +++ +R M+ +G
Sbjct: 159 NVVITGFAGWGEVEYARLLFERMP--CRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEG 216
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P TV++++ + ++ G +H + G DV V N+LI +Y+K G I ++
Sbjct: 217 ISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSL 276
Query: 314 FLFDGMCDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+FD M DR VSWT++ISG+A G +A+ LF M AG P+ +T LS++ C
Sbjct: 277 RVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHG 336
Query: 373 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTT 430
G +E G +F + + +V +IDM + G + +A ++ P E W T
Sbjct: 337 GLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRT 396
Query: 431 MIAGCALNGE 440
++ C+ GE
Sbjct: 397 LLGCCSKYGE 406
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 124/573 (21%), Positives = 228/573 (39%), Gaps = 62/573 (10%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ ++ AL LFR + + + + F F KACA L +HG +V
Sbjct: 58 WHALLKAYSHGPHPQDALQLFRHARWHAAD-DTYAFTFALKACAGLGWPRCCMQLHGLVV 116
Query: 82 KSPFWSDIFVQTTMVDMYAKCD-------------------------------RLDCAYK 110
+ F +V T +V++Y C ++ A
Sbjct: 117 RKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYARL 176
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LF++MP R+V SW+ MI G+ + + + LF M GI +TV+ + A +
Sbjct: 177 LFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPALSNVGK 236
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ + +++H + G+ DV V N+ I YAK ++ + VF + + R +VSW SII
Sbjct: 237 ILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDR-RNLVSWTSII 295
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGF 289
G ++ + M G RP+ T +S+L +C + QG I+ Y
Sbjct: 296 SGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNI 355
Query: 290 DLDVSVINTLISMYSKCGDIDSA-RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR--- 345
+ DV +I M + G + A + + D + W ++ ++ G+++ R
Sbjct: 356 NPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMK 415
Query: 346 --LFFAMEAAGEVPDLVTVLSMISGCGQSG-------------------ALELGKWFDNY 384
L E G+ L +L+ + + +E K Y
Sbjct: 416 KILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSFFNIVRMEAIKRLHAY 475
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGS-IGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
GL + + ++ Y+ + A ++F + T W +I G A + +
Sbjct: 476 YIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPAD 535
Query: 444 ALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMA 503
A+ + + + P+ +TF +L+AC L +G N +TK+ ++ ++ + +
Sbjct: 536 AIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLS-DIFVSNSLI 594
Query: 504 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
L G L A M +K D W +L+C
Sbjct: 595 HLYAACGNLCYARSVFDEMVVK-DVVSWNSLIC 626
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 37/254 (14%)
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAME--AAGEVPDLVTVLSMISG------CGQS 372
DR W A++ Y+ +AL+LF AA + L +G C Q
Sbjct: 52 DRRPTPWHALLKAYSHGPHPQDALQLFRHARWHAADDTYAFTFALKACAGLGWPRCCMQL 111
Query: 373 GALELGKWFD-----------NYACSGGLKD-----------NVMVCNALIDMYSKCGSI 410
L + K F+ Y G L D N + N +I ++ G +
Sbjct: 112 HGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGEV 171
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
AR LF +P + VVSW+ MI G VEA+ LF +MM + P+ +T LAV+ A
Sbjct: 172 EYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPAL 231
Query: 471 THAGFL---EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
++ G + E GY V+ V + + DL + G ++ +L M + +
Sbjct: 232 SNVGKILIGEALHGYCEKEGLVWDVRVG----NSLIDLYAKIGSIQNSLRVFDEMLDRRN 287
Query: 528 AGIWGTLLCACKIH 541
W +++ +H
Sbjct: 288 LVSWTSIISGFAMH 301
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 202/639 (31%), Positives = 316/639 (49%), Gaps = 83/639 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I + A++AL LF M + EPN++T +ACA + + IH
Sbjct: 240 WSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH---- 295
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K W +DV SW A++ G+AQ G K +
Sbjct: 296 KIAVW-------------------------------KDVVSWVALLSGYAQNGMAYKSMG 324
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F NM GIQ D V V+ + A+ +H + + G +++V V + I Y+
Sbjct: 325 VFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYS 384
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI---------YD 252
KC L A +F+G+ +R VV W+S+I + ++L + MI Y
Sbjct: 385 KCGSLGDAVKLFKGMI--VRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQ 442
Query: 253 -GFRPDVTTVVSLLSSC---------------------------VCPEALVQGR-LVHSH 283
+P V +++ +SC + P Q + S+
Sbjct: 443 ISMQPQVQPPLAI-TSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSN 501
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
YG D ++ MY ID+A +F+ + + W MI G+A G +
Sbjct: 502 IFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSS 561
Query: 344 LRLFFAM-------EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
L L+ M + +G +P+ V++LS++ CG GAL G+WF +Y G + +++V
Sbjct: 562 LELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILV 621
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
A++DMYSKCGS+ AR LF K +V W+ MIA ++G +A+DLF QM++ +
Sbjct: 622 ATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGV 681
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
RP+ VTF VL AC+H+G LE+G YF LMT+ + + +L++Y+CM DLLGR G+L EA+
Sbjct: 682 RPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAV 741
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
D +++MP++ DA IWG+LL AC+IH N+++ E +A LF L+P A +V ++NIYA
Sbjct: 742 DLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKS 801
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
RW+ V +R MM R K G SLV + + F V D
Sbjct: 802 RWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGD 840
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 142/565 (25%), Positives = 232/565 (41%), Gaps = 97/565 (17%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
+++KI + W + + A+K++ +FR M + I+P+ + I A ++L
Sbjct: 293 KIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG 352
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
F + +HG++V+S F S++FV +++++Y+KC L A KLF M RDV W++MI
Sbjct: 353 IFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIA 412
Query: 129 GFAQMGFLEKVLCLFYNMRLV----------GIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+ G + L +F M V +Q + +T + A H+
Sbjct: 413 AYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTL-ATHIPWKVKAF 471
Query: 179 SFGIHI----------------------------GVDADVSVCNTWISAYAKCNDLKMAE 210
H G+ D + + Y N + A
Sbjct: 472 YMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAAS 531
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV-------S 263
+VF I + WN +I G +F SL Y M+ G +PD + V+ S
Sbjct: 532 IVFEDIPNPCSFL--WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILS 589
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
+L +C AL +G HS+ I GF+ D+ V ++ MYSKCG +D AR LFD +
Sbjct: 590 VLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD 649
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF-- 381
V W+AMI+ Y G +A+ LF M AG P VT ++S C SG LE GK +
Sbjct: 650 LVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ 709
Query: 382 ------------DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSW 428
NYAC ++D+ + G + +A +L +P E W
Sbjct: 710 LMTEEFVIARKLSNYAC-------------MVDLLGRAGQLSEAVDLIENMPVEPDASIW 756
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+++ C ++ A + + LD HA GY L++
Sbjct: 757 GSLLGACRIHNNLDLAEKIADHLFHLD--------------PVHA-------GYHVLLSN 795
Query: 489 VYQVNPELNHYSCMADLLGRKGKLK 513
+Y N + ++ R+G K
Sbjct: 796 IYAAKSRWNEVEKVRKMMARRGANK 820
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 234/538 (43%), Gaps = 76/538 (14%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE-PNNLTFPFIAKACAKLSDFLYSQMI 76
++ WNS +R + + + L LF M E P+N T P KACA L ++I
Sbjct: 66 NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125
Query: 77 HGHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
HG K+ SD+FV + +V++Y+KC ++ A K+F++ D W +M+ G+ Q
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185
Query: 136 LEKVLCLFYNMRLVG-IQADFVTVMGLTQ-------AAIHAKHLSLL--KSVHSFGIHIG 185
E+ L LF M ++ D V L I A S + K V S+ I
Sbjct: 186 PEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIA 245
Query: 186 VDADVSVCNTWISAYAKCNDLKM------------AELVFRGIEEGLRT--------VVS 225
A+ N ++ + + + + A V R +EEG + VVS
Sbjct: 246 CYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVS 305
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
W +++ G S+ +R+M+ DG +PD VV +L++ Q +H + +
Sbjct: 306 WVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV 365
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
GF+ +V V +LI +YSKCG + A LF GM R V W++MI+ Y G EAL
Sbjct: 366 RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALE 425
Query: 346 LF---------------FAMEAAGEVPDLVTVLSMISGCG--------QSGALELGKWFD 382
+F +M+ + P +T ++ + ++ LG +++
Sbjct: 426 IFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWE 485
Query: 383 NYAC--------------SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
+ + GL+ + + MY I A +F +P W
Sbjct: 486 IFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLW 545
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLR-------PNRVTFLAVLQACTHAGFLEKG 479
MI G A +G F+ +L+L+ +MME L+ PNRV+ L+VL AC + G L KG
Sbjct: 546 NVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG 603
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 196/421 (46%), Gaps = 52/421 (12%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H + K+ D F T + +YAKC L A K+FD+ P +V WN+ + + +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 136 LEKVLCLFYNMRLVGIQA-DFVTVMGLTQAAIHAKHLSLLKSVHSFG-IHIGVDADVSVC 193
E+ L LF+ M +A D T+ +A + L L K +H F + + +D+ V
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRT-VVSWNSIIGGCTYGDKFDDSLNFYRHMI-- 250
+ + Y+KC + A VF EE R V W S++ G + +++L + M+
Sbjct: 143 SALVELYSKCGQMGEALKVF---EEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 251 --YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
+DG P V ++++L + C + + ++ + DV +T+I+ Y+
Sbjct: 200 DCFDGDLPLVNSLLNLYAKTGCEK-------IAANLFSKMPEKDVISWSTMIACYANNEA 252
Query: 309 IDSARFLFDGM------------------CDRTR-----------------VSWTAMISG 333
+ A LF M C +R VSW A++SG
Sbjct: 253 ANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSG 312
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
YAQ G +++ +F M + G PD V V+ +++ + G + Y G N
Sbjct: 313 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 372
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V V +LI++YSKCGS+GDA +LF + + VV W++MIA ++G EAL++F QM++
Sbjct: 373 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQ 432
Query: 454 L 454
+
Sbjct: 433 V 433
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 151/325 (46%), Gaps = 41/325 (12%)
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
++ L QA + + +S L HS G+ D S YAKC L+ A VF
Sbjct: 6 VLVDLFQACNNGRSVSQL---HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD-- 60
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDGFRPDVTTVVSLLSSCVCPEALV 275
E V WNS + +++++L + MI G PD T+ L +C L
Sbjct: 61 ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120
Query: 276 QGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
G+++H D+ V + L+ +YSKCG + A +F+ V WT+M++GY
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY 180
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q D +EAL LF M ++ C FD ++
Sbjct: 181 QQNNDPEEALALFSQM--------------VMMDC-----------FDG---------DL 206
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+ N+L+++Y+K G A LF +PEK V+SW+TMIA A N EAL+LFH+M+E
Sbjct: 207 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 266
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKG 479
PN VT ++ LQAC + LE+G
Sbjct: 267 RFEPNSVTVVSALQACAVSRNLEEG 291
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 133/296 (44%), Gaps = 12/296 (4%)
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+V L +C ++ Q +HS G D L S+Y+KC + +AR +FD
Sbjct: 6 VLVDLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELG 378
W + + Y ++ +E LRLF M AGE PD T+ + C LELG
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 379 KWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
K +A + ++ V +AL+++YSKCG +G+A ++F V WT+M+ G
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
N + EAL LF QM+ +D + + L EK NL +K+ + ++
Sbjct: 183 NNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAA--NLFSKMPE--KDVI 238
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIK---SDAGIWGTLLCACKIHRNIEIGEYV 550
+S M EAL+ M K ++ + L AC + RN+E G+ +
Sbjct: 239 SWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKI 294
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 301/596 (50%), Gaps = 11/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + AL +F M ++ + PN+ ACA L + +H V
Sbjct: 82 WTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAV 141
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F D ++ + +++MY++C L A ++FD+M DV + ++I F + G E
Sbjct: 142 RAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE 201
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDADVSVCNT-WISA 199
M G++ + T+ + A L + +H + I IG+ + +T I
Sbjct: 202 ALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDF 257
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y++ + K+A+ VF + + VVSW S++ + +++L + MI +G P+
Sbjct: 258 YSRNGEFKLAKAVFDSLH--CKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEF 315
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ +L +C ++ GR +H I + D+ V N L+SMY + G ++ + + +
Sbjct: 316 ALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI 372
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ VSWT IS Q G ++A+ L M + G P+ S++S C +L+ G
Sbjct: 373 ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM 432
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
F A G + NALI+MYSKCG +G AR F + V SW ++I G A +G
Sbjct: 433 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 492
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ +AL++F +M ++P+ TFL VL C H+G +E+G +F LM Y P +HY
Sbjct: 493 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHY 552
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM D+LGR G+ EAL + MP + DA IW TLL +CK+HRN++IG+ A RL EL
Sbjct: 553 ACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 612
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV M+NIYA+ G W+ +R M VKK G S + IN + TF D
Sbjct: 613 RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRD 668
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 206/457 (45%), Gaps = 27/457 (5%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D+ ++ ++ K RL A LFD+MP ++V +W +++ G+ + G E L +F +M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ + A L + VHS + G D + + I Y++C L
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF ++ VV + S+I +F+ + M+ G +P+ T+ ++L++
Sbjct: 167 AAKEVFDRMDS--PDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTA 224
Query: 268 CVCPEAL---VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
CP L + G L+ G+ V LI YS+ G+ A+ +FD + +
Sbjct: 225 --CPRVLGQQIHGYLIKKIGLR---SQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
VSW +M+ Y + G L+EAL++F M + G P+ + ++ CG G LG+
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCS 336
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A L ++ V NAL+ MY + G + + + + +VSWTT I+ NG +A
Sbjct: 337 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 396
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNH 498
+ L QM PN F +VL +C L++G + L K + N +N
Sbjct: 397 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINM 456
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
YS G+ G + A D + + + S W +L+
Sbjct: 457 YS----KCGQMGSARLAFDVMHTHDVTS----WNSLI 485
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC-----AKL 67
+ + + WNS I +A+KAL +F +M+ N I+P++ TF + C +
Sbjct: 472 VMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEE 531
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAM 126
+ + MI + F M+DM + R D A ++ + MP + D W +
Sbjct: 532 GELFFRLMIDQY----SFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 587
Query: 127 IV 128
+
Sbjct: 588 LA 589
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 202/618 (32%), Positives = 318/618 (51%), Gaps = 11/618 (1%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
L R+ R + WN+ I V +A +FR M + I P ++F + A
Sbjct: 170 LVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229
Query: 66 KLSDFLYSQMIHGHIVK--SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
++SD+ + +++G +VK S F D FV ++ + MYA+ +D A ++FD +R+ W
Sbjct: 230 RMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 124 NAMIVGFAQMGFLEKVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
N MI G+ Q + + LF M D VT + A + L L + +H++ +
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYIL 349
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
V + N I Y++C + + VF + E R VV+WN+++ D+
Sbjct: 350 KSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLE--RDVVTWNTMVSAFVQNGLDDEG 407
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L M GF D T+ +LLS + G+ H++ I +G + + + LI M
Sbjct: 408 LMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDM 466
Query: 303 YSKCGDIDSARFLFDGMCD--RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
Y+K G I +A+ LF+ D R +W AMI+GY Q G +E +F M P+ V
Sbjct: 467 YAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAV 526
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
T+ S++ C G + LGK +A L NV V AL+DMYSK G+I A +F
Sbjct: 527 TLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAET 586
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
EK V++TTMI+ +G AL LFH M+ ++P+ VTF+A+L AC++AG +++G
Sbjct: 587 LEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGL 646
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCACK 539
F M + Y++ P HY C+AD+LGR G++ EA +FV+ + + + GIWG+LL AC+
Sbjct: 647 RIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACR 706
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAP--YVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
IH E+G+ VA +L E+E S+ +V ++NIYA G WD V +R M++ + K
Sbjct: 707 IHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEA 766
Query: 598 GQSLVHINGKTCTFTVED 615
G S V + G F D
Sbjct: 767 GCSWVEVAGHVNCFMSRD 784
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 225/530 (42%), Gaps = 33/530 (6%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAI 166
A LFD +P WN +I+GF L + MR + D T +A
Sbjct: 56 ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC-------------NDLKMAELVF 213
A+ L L K++H + + V N+ ++ Y+ C N+ + VF
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
+ + R VV+WN++I ++ ++ +R M+ G RP + V++ +
Sbjct: 176 DTMRK--RNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSD 233
Query: 274 LVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMI 331
+++ + G D D V+++ I MY++ G +D AR +FD +R W MI
Sbjct: 234 YDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293
Query: 332 SGYAQKGDLDEALRLFF-AMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
GY Q EA+ LF ME+ V D VT LS ++ Q LELG+ Y
Sbjct: 294 GGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSST 353
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
V++ NA+I MYS+CGSIG + ++F + E+ VV+W TM++ NG E L L
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFA 413
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
M + + VT A+L ++ E G + + ++ Y + D+ + G
Sbjct: 414 MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSY--LIDMYAKSG 471
Query: 511 KLKEALD-FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE--LEPH-----SA 562
+ A F ++ D W ++ + E G V ++ E + P+ S
Sbjct: 472 LITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASI 531
Query: 563 APYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
P LG + G A +R + RN F G +L+ + K+ T
Sbjct: 532 LPACNPMGTIGLGKQIHGFA-IRCFLNRN---VFVGTALLDMYSKSGAIT 577
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
I + +S + G A LFD + T V W +I G+ +AL LF+A A
Sbjct: 40 IRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASP 98
Query: 356 VP--DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC------ 407
P D T S + C Q+ +L+LGK + + +V N+L++MYS C
Sbjct: 99 SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPY 158
Query: 408 -GSIGD------ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
G+ D R +F + ++ VV+W TMI+ +EA +F MM + +RP
Sbjct: 159 LGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTP 218
Query: 461 VTFLAVLQA 469
V+F+ V A
Sbjct: 219 VSFVNVFPA 227
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 284/541 (52%), Gaps = 3/541 (0%)
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
KA + +DF Y + +H +VK+ D+FV +VDMYAK L A K+FD++PDR+V
Sbjct: 136 KAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVV 194
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
SW +M+ G Q G ++ L LF MR I T+ + A L + +H
Sbjct: 195 SWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSV 254
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+ G+ ++ + + Y KC + + A VF E +V W ++I G T D
Sbjct: 255 MKHGLVSNHFITAAMLDMYVKCGEAEDARQVFD--ELSFVDLVLWTTMIVGYTQNGSPLD 312
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+L + + P+ T+ ++LS+ L GR +H + G + V+N L+
Sbjct: 313 ALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVD 372
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY+KC + A+ +F + ++ V+W ++I+GYA+ +AL LF M G +PD ++
Sbjct: 373 MYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAIS 432
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
V++ +S C G L +GK F YA N+ V AL+++Y+KC + A+ +F +
Sbjct: 433 VVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMN 492
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ V+W MI G + G+ ++DLF++M++ +++PN F ++L C+H G + G
Sbjct: 493 DRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKK 552
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
F M + + P + HY+CM D+L R G L+EAL+F+Q MP+++D IW L CK+H
Sbjct: 553 CFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLH 612
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+E E R+ L P + V M+N+Y GRWD +R +MK + K PG S
Sbjct: 613 SRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSS 672
Query: 602 V 602
V
Sbjct: 673 V 673
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 224/436 (51%), Gaps = 4/436 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W S + + A + L+LF M++ I P+ T + AC L ++IHG +
Sbjct: 195 SWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSV 254
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K S+ F+ M+DMY KC + A ++FD++ D+ W MIVG+ Q G L
Sbjct: 255 MKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDAL 314
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF + + + I + VT+ + A+ ++LSL +S+H + +G + V N + Y
Sbjct: 315 LLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMY 374
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC L A+ +F + + VV+WNS+I G D D+L + HM G PD +
Sbjct: 375 AKCKALSDAKGIFGRVLN--KDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAIS 432
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VV+ LS+CVC L+ G+ H++ + + F ++ V L+++Y+KC D+ SA+ +F M
Sbjct: 433 VVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMN 492
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
DR V+W AMI GY +GD ++ LF M P+ S++S C +G + +G K
Sbjct: 493 DRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKK 552
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
F++ A + ++ ++D+ ++ G++ +A E +P + S W + GC L+
Sbjct: 553 CFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLH 612
Query: 439 GEFVEALDLFHQMMEL 454
A + ++MM L
Sbjct: 613 SRLEFAEEAVNRMMVL 628
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 17/287 (5%)
Query: 256 PDVTTVV-SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD ++ LL +C +L R +H+ + +G + L+S Y+ GD+ SAR
Sbjct: 25 PDANPLLHRLLPACTTLPSL---RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARR 81
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQS 372
+ D ++ + +A G EA+ + M E D+V + + +S
Sbjct: 82 VLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRS 141
Query: 373 GALELGKWF--DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G+ D GG ++ V N L+DMY+K G + +AR++F +P++ VVSWT+
Sbjct: 142 ADFGYGRRLHCDVVKAGGG---DLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTS 198
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
M++GC NG E L LF++M + + P+ T +VL ACT G L +G + K
Sbjct: 199 MLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHG 258
Query: 491 QVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
V+ NH+ + M D+ + G+ ++A + D +W T++
Sbjct: 259 LVS---NHFITAAMLDMYVKCGEAEDARQVFDELSF-VDLVLWTTMI 301
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 304/597 (50%), Gaps = 35/597 (5%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
E N+ + + C + + + +H I+K D+F +++MY K D L A K
Sbjct: 35 EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94
Query: 111 LFDKMPDRDVASWNAMIVGFAQ-MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LFD+MP+R+ S+ +I G+A+ + FLE + LF + G + + + + +
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIE-LFVRLHREGHELNPFVFTTILKLLVSTD 153
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
L +H+ +G +++ V I AY+ C + +A VF GI + +VSW +
Sbjct: 154 CGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGIL--YKDMVSWTGM 211
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
+ D F ++L + M GF+P+ T S+ +C+ EA G+ VH + +
Sbjct: 212 VTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRY 271
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+LD+ V L+ +Y+K GDID AR F+ + + + W+ MI+ YAQ EA+ +FF
Sbjct: 272 ELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQ 331
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M A +P+ T S++ C L LG + GL +V V NAL+D+Y+KCG
Sbjct: 332 MRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR 391
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME---------------- 453
+ ++ ELF P + V+W T+I G G+ +AL LF M+E
Sbjct: 392 MENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 451
Query: 454 ---------------LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
L ++P+++TF+ VL AC +AG L++G YF M + + + P + H
Sbjct: 452 CASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEH 511
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM LLGR G L +A+ + +P + +W LL AC IH +IE+G A R+ E+E
Sbjct: 512 YTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEME 571
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P A +V ++N+YA RWD VA++R MKR VKK PG S + G +FTV D
Sbjct: 572 PQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGD 628
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 170/366 (46%), Gaps = 20/366 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + + +AL LF +M+ +PNN TF + KAC L F + +HG +
Sbjct: 208 WTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCAL 267
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + D++V ++D+Y K +D A + F+++P +DV W+ MI +AQ ++ +
Sbjct: 268 KSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVE 327
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F+ MR + + T + QA + L+L +H I IG+ +DV V N + YA
Sbjct: 328 MFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYA 387
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ + +F E R V+WN++I G + +L + +M+ + T
Sbjct: 388 KCGRMENSMELF--AESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTY 445
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L +C AL G +HS + D ++S + G +D + F M
Sbjct: 446 SSALRACASLAALEPGLQIHSLTV----KPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ 501
Query: 322 RTRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL---SMISGCGQSG 373
+ +T M+ + G LD+A++L E+P +V+ +++ C
Sbjct: 502 DHGIEPCIEHYTCMVWLLGRGGHLDKAVKLI------DEIPFQPSVMVWRALLGACVIHN 555
Query: 374 ALELGK 379
+ELG+
Sbjct: 556 DIELGR 561
>gi|48475127|gb|AAT44196.1| hypothetical protein, contains pentatricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|51854327|gb|AAU10708.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 634
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 306/584 (52%), Gaps = 18/584 (3%)
Query: 39 LLLFRRMKKNDIEPNNLTFPFIA----KACAKLSD--FL-YSQMIHGHIVKSPFWSDIFV 91
+ LF R++ + P PF+ K+CA +D FL ++ +H V+S S +FV
Sbjct: 1 MALFSRLRASS-PPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFV 59
Query: 92 QTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI 151
T + D+YAK L A K+FD+MP ++V SW ++ + G + L F MR G+
Sbjct: 60 ATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGV 119
Query: 152 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
D A A LS + VH+F +G+D+ V NT + YA+C+D+ A
Sbjct: 120 HCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALA 179
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD----GFRPDVTTVVSLLSS 267
+ G R V +W ++I + +++ + M+ + P+ T +++++
Sbjct: 180 AVSRM--GTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAA 237
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSARFLFDGMCDRTRVS 326
C + G +H+ GF SV N+L+++Y++ G + +A +F + VS
Sbjct: 238 CADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVS 297
Query: 327 WTAMISGYAQKGDLDEALRLFFAME--AAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
W+A+ISGYAQ+G ++A LF M + P+ T+ S++S C + +L+ G+
Sbjct: 298 WSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTL 357
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A + GL+ + M+ +ALIDMY K GS+ DA +F + VVSWT MI G A +G +A
Sbjct: 358 AVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKA 417
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L+LF +M + L+P+ VTF+ VL AC HAG +E G Y N M ++Y + P HY C+ D
Sbjct: 418 LELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVD 477
Query: 505 LLGRKGKLKEALDFVQSMPI-KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAA 563
LLGR G++ EA + + + + D +W +LL AC E G+ A R E EP A
Sbjct: 478 LLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAG 537
Query: 564 PYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGK 607
+V MAN+YA G+W A R MMK+ V K G S + + G+
Sbjct: 538 AHVAMANLYASKGQWHEAAQERHMMKQKGVVKGAGWSSITVGGE 581
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 198/447 (44%), Gaps = 12/447 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ W + + H+AL F M+ + + ++ + ACA + +H
Sbjct: 88 VVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHA 147
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
K S +V T+ +YA+C +D A +M RDVA+W +I + Q G ++
Sbjct: 148 FCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKE 207
Query: 139 VLCLFYNM----RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ F M V + T + A + L + +H+ G SV N
Sbjct: 208 AIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVAN 267
Query: 195 TWISAYAKCND-LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ ++ Y + L A+ VFR E ++ VVSW++II G +D+ +R M +
Sbjct: 268 SLVTLYTRAAGCLSAADAVFR--ESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHS 325
Query: 254 F--RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
RP+ T+ SLLS C +L GR +H+ + G + + + LI MY K G +
Sbjct: 326 GCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLD 385
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F VSWTAMI GYA+ G +AL LF M G PD VT + +++ C
Sbjct: 386 ADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCH 445
Query: 372 SGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKTVVSW 428
+G +ELG ++ + GL ++D+ + G I +A EL A E+ V W
Sbjct: 446 AGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVW 505
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELD 455
T+++ CA GE + ME +
Sbjct: 506 TSLLRACAARGEEETGKKAAERAMEAE 532
>gi|226505108|ref|NP_001141927.1| uncharacterized protein LOC100274076 [Zea mays]
gi|194706472|gb|ACF87320.1| unknown [Zea mays]
gi|413938142|gb|AFW72693.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 583
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 193/577 (33%), Positives = 296/577 (51%), Gaps = 9/577 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ ++++ N+ +R +AL L+ +M+ D +LTF F AKACA L + +
Sbjct: 3 QPASVSVSNTLLRSYSGLGFHRQALALYSQMRHFD----HLTFTFAAKACAGLRLRRHGR 58
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG + + F SD +VQ +V MY +C + A +F +P R SWN +I G + G
Sbjct: 59 AVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVKDG 118
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E+ L +F M G+ D +V+ + A A+ L ++VH + G+ V+V N
Sbjct: 119 RAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAVKN 178
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGL-RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
I Y KC L+ A VF E+ + VVSW +IG D + M+
Sbjct: 179 ALIDMYGKCGSLEDARRVFD--EDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSS 236
Query: 254 -FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+P+ T+ LLS+C + + H+ I G D+ V L+ Y+KCG +
Sbjct: 237 EAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVI 296
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ + RT +W A ISGY Q+ +AL LF M A PD T+ S+I +S
Sbjct: 297 DMVVEKGSRRTE-TWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAES 355
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L G + + LID+Y+K G +G A ELF LPEK VV+WTT+I
Sbjct: 356 ADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVI 415
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
AG ++G A+ L+ +M+EL + PN VT ++L +C+HAG +++G FN M V+ +
Sbjct: 416 AGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGL 475
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P HY C+ D+LGR G+++EA ++ MP + +W +LL AC +H N+E GE A
Sbjct: 476 MPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAK 535
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK 589
LFELEP + YV + +YA RW V +LR +M+
Sbjct: 536 HLFELEPDNVGNYVLLGKVYAAAERWSDVQHLRRVME 572
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 294/550 (53%), Gaps = 39/550 (7%)
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D L A +F+ +P+ + WN M G A L L+ M +G+ +F T L
Sbjct: 23 DGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLL 82
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--------- 213
++ +K + +H + +G D D+ V + IS YA+ L+ A+ VF
Sbjct: 83 KSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142
Query: 214 -----------RGIEEG---------LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
RG E ++ VVSWN++I G + +L ++ M+
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD +T+ +++S+C ++ GR VHS +GF ++ ++N LI +YSKCG++++A
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
L +G+ ++ +SW +I GY EAL LF M +GE P+ VT+LS++ C G
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNA------LIDMYSKCGSIGDARELFYALP-EKTVV 426
A+++G+W Y LK V+V NA LIDMY+KCG I A ++ + +++
Sbjct: 323 AIDIGRWIHVY-IDKKLK-GVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLS 380
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
+W MI G A++G A D+F +M + + P+ +TF+ +L AC+H+G L+ G F M
Sbjct: 381 TWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 440
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
+ Y + P+L HY CM DLLG G KEA + + +MP++ D IW +LL ACKIH N+E+
Sbjct: 441 RQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLEL 500
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMK-RNQVKKFPGQSLVHIN 605
GE A +L ++EP + YV ++NIYA G+W+ V +RT++ + KK PG S + I+
Sbjct: 501 GESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEID 560
Query: 606 GKTCTFTVED 615
F + D
Sbjct: 561 SVVHEFIIGD 570
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 228/461 (49%), Gaps = 46/461 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN R ++ AL L+ M + PN TFPF+ K+CAK F Q IHGH++
Sbjct: 43 WNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVL 102
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLD-------------------------------CAYK 110
K F D++V T+++ MYA+ RL+ A K
Sbjct: 103 KLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQK 162
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD++P +DV SWNAMI G+A+ G +K L LF M ++ D T+ + A +
Sbjct: 163 MFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGS 222
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G +++ + N I Y+KC +++ A + G+ + V+SWN++I
Sbjct: 223 IELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN--KDVISWNTLI 280
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H ++
Sbjct: 281 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH---VYIDKK 337
Query: 291 LDVSVI-------NTLISMYSKCGDIDSARFLFDGMC-DRTRVSWTAMISGYAQKGDLDE 342
L V+ +LI MY+KCGDID+A + D +R+ +W AMI G+A G +
Sbjct: 338 LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANA 397
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALI 401
A +F M G PD +T + ++S C SG L+LG+ F + + + +I
Sbjct: 398 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMI 457
Query: 402 DMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEF 441
D+ G +A E+ +P E V W +++ C ++G
Sbjct: 458 DLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNL 498
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 154/369 (41%), Gaps = 48/369 (13%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + KAL LF+ M K +++P+ T + ACA+ + +H I
Sbjct: 175 WNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWIN 234
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F S++ + ++D+Y+KC ++ A +L + + ++DV SWN +I G+ M ++ L
Sbjct: 235 DHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALL 294
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH----IGVDADVSVCNTWI 197
LF M G + VT++ + A H + + + +H + + V S+ + I
Sbjct: 295 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLI 354
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YAKC D+ A V R++ +WN++I G + + + + + M +G PD
Sbjct: 355 DMYAKCGDIDAAPQVSDSSAFN-RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 413
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T V LLS+C S G +D R +F
Sbjct: 414 DITFVGLLSAC-----------------------------------SHSGMLDLGRNIFR 438
Query: 318 GMCDRTRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
M ++ + MI G EA + M PD V S++ C
Sbjct: 439 SMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME---PDGVIWCSLLKACKIH 495
Query: 373 GALELGKWF 381
G LELG+ F
Sbjct: 496 GNLELGESF 504
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 186/515 (36%), Positives = 286/515 (55%), Gaps = 12/515 (2%)
Query: 111 LFDKMPDR-DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LF++ D+ DV SWN++I A+ G + L F +MR + + + +A
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ K H G +D+ V + I Y+ C L+ A VF I + R +VSW S+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK--RNIVSWTSM 148
Query: 230 IGGCTYGDKFDDSLNFYRHMIYD------GFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
I G D+++ ++ ++ D D +VS++S+C A +HS
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 284 GIHYGFDLDVSVINTLISMYSKCGD--IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
I GFD VSV NTL+ Y+K G+ + AR +FD + D+ RVS+ +++S YAQ G +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 342 EALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
EA +F + V + +T+ +++ SGAL +GK + GL+D+V+V ++
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
IDMY KCG + AR+ F + K V SWT MIAG ++G +AL+LF M++ +RPN
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+TF++VL AC+HAG +GW +FN M + V P L HY CM DLLGR G L++A D +Q
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
M +K D+ IW +LL AC+IH+N+E+ E RLFEL+ + Y+ +++IYA GRW
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +R +MK + K PG SL+ +NG+ F + D
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 233/463 (50%), Gaps = 15/463 (3%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+L N+ + + WNS I + ++ +ALL F M+K + P +FP KAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
+ L D + H + SDIFV + ++ MY+ C +L+ A K+FD++P R++ SW
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQAD----FVTVMGLT---QAAIHAKHLSLLKSV 177
+MI G+ G + LF ++ LV D F+ MGL A L +S+
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCND--LKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
HSF I G D VSV NT + AYAK + + +A +F I + R VS+NSI+
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVYAQ 263
Query: 236 GDKFDDSLNFYRHMIYDGFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+++ +R ++ + + T+ ++L + AL G+ +H I G + DV
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V ++I MY KCG +++AR FD M ++ SWTAMI+GY G +AL LF AM +G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 355 EVPDLVTVLSMISGCGQSG-ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
P+ +T +S+++ C +G +E +WF+ G++ + ++D+ + G + A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 414 RELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+L + K + W++++A C ++ A ++ ELD
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/614 (29%), Positives = 320/614 (52%), Gaps = 18/614 (2%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
Y+ ST N ++ +A +A+ + +K+ + + P + + C + +
Sbjct: 42 YQGSTQVLENGRLEAPPRPLDAQEAMAM---LKEGQSVQSAMYVPLLHR-CIETGSLGGA 97
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +HGH+VK+ DIFV T++V++Y +C A LFD+MP+++V +W A+I G+
Sbjct: 98 KALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLN 157
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
L +F M +G T+ G+ A + + ++ L K VH + I G + S+
Sbjct: 158 SQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIG 217
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD-SLNFYRHMIYD 252
N+ Y K +L+ F+ I + + V++W ++I C + + + LN + M+
Sbjct: 218 NSLCRLYTKSGNLESGIRAFKRIPD--KNVITWTTMISACAEDENYTELGLNLFLDMLKG 275
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
P+ T+ S++S C + G+ V G ++ V N+ + +Y + G+ + A
Sbjct: 276 EVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEA 335
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQ-----KGDLD------EALRLFFAMEAAGEVPDLVT 361
LF+ M D + ++W AMISG+AQ K DL +AL++F + + PDL T
Sbjct: 336 MRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFT 395
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
S++S C ALE G+ G +V+V +AL++MY+KCG I A + F +P
Sbjct: 396 FSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMP 455
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+T+V+WT+MI+G + +G +A+ LF M+ +PN +TF+++L AC++AG +E+
Sbjct: 456 TRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMR 515
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YF++M Y + P ++HY CM D+ R G+L +A F++ + + IW +L+ C+ H
Sbjct: 516 YFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSH 575
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
N+E+ Y A RL EL+P YV + N+Y GRW VA +R + K + +S
Sbjct: 576 GNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSW 635
Query: 602 VHINGKTCTFTVED 615
+ I K F +D
Sbjct: 636 ITIRDKVYFFKADD 649
>gi|357143056|ref|XP_003572787.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Brachypodium distachyon]
Length = 594
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 187/585 (31%), Positives = 300/585 (51%), Gaps = 15/585 (2%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
NS +R +A+ L+ M+ D +LTFPF AKAC L + + +H +
Sbjct: 11 NSLLRSYTGLGHYREAVALYSGMRSFD----HLTFPFAAKACGGLRLSRHGRAVHCRALA 66
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ F D +VQ ++ MY C + A +F M +R V SWNA+I G + E+ L +
Sbjct: 67 AGFGDDTYVQNALISMYMGCGDVAAAEAVFCAMQNRTVVSWNAVIAGCVKNDCAERALEV 126
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F M G + D TV+ + A AK+LS+ ++VH G+ +V N I Y K
Sbjct: 127 FGEMAGDGTEIDRATVVSVLPACAQAKNLSIGRAVHQLVEERGLADYAAVKNALIDMYGK 186
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP--DVTT 260
C +L+ A VF + + VVSW +IG D +++ M+ P + T
Sbjct: 187 CRNLEGARKVFDDHKYD-KDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTSGAPWPNGVT 245
Query: 261 VVSLLSSCVCPEALVQGR---LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ LLS+C + + GR +H+ I G + D+ V L+ Y+KC ++ +
Sbjct: 246 MAYLLSAC----SRLSGRHAKCMHAMCIRLGLESDIIVETALMDAYAKCHNMKMMELTLE 301
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
RT +W A ISGY +A+ L M A PD T+ S++ +S +
Sbjct: 302 NGSRRTE-TWNATISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAESADVRQ 360
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
Y + G + + LI++Y+K G + + LF LPEK VV+WTT+IAG +
Sbjct: 361 ATNIHCYLLTLGFLRSTEITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWTTVIAGYGM 420
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G+ ++ L+++M++L ++PN VTF ++L AC+H G +++G F M ++ V P +
Sbjct: 421 HGQAQTSILLYNRMVQLGVKPNTVTFASLLYACSHVGMVDEGLQLFEDMRGIHGVMPNAD 480
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HYS + D++GR G+++EA ++ MP++ +WG LL AC +H+N++ GE A LFEL
Sbjct: 481 HYSSLVDMVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLHKNVKFGEVAAKHLFEL 540
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
EP + +V + NIYA RW V ++R M + K G SLV
Sbjct: 541 EPKNTGNHVLLGNIYAAADRWSDVQDVRRRMAEKGLSKESGSSLV 585
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S WN+ I + KA+ L +RM P++ T I A A+ +D +
Sbjct: 304 SRRTETWNATISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAESADVRQATN 363
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +++ F + T ++++YAK LD ++ LFD +P++DV +W +I G+ G
Sbjct: 364 IHCYLLTLGFLRSTEITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWTTVIAGYGMHGQ 423
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSVHSFGIHIGVDADVS 191
+ + L+ M +G++ + VT L A H + L L + + GIH GV +
Sbjct: 424 AQTSILLYNRMVQLGVKPNTVTFASLLYACSHVGMVDEGLQLFEDMR--GIH-GVMPNAD 480
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEE-GLRTVVS-WNSIIGGC 233
++ + + ++ A +R IE+ L S W +++G C
Sbjct: 481 HYSSLVDMVGRAGRIEEA---YRLIEDMPLEPSTSVWGALLGAC 521
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 178/594 (29%), Positives = 313/594 (52%), Gaps = 2/594 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + +L ++ K +++ + +F AC + + +H +V
Sbjct: 224 WNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLV 283
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F +D +V T+++ MY+KC ++ A +FD++ + WNAMI + G L
Sbjct: 284 KLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLK 343
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
++ M+++ I D +T + + + +H+ + + ++V++ + ++ Y+
Sbjct: 344 IYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYS 403
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F I+ R VV+W S+I G K+ ++L FY M G +PD +
Sbjct: 404 KCGNSDDANSIFNTIKG--RDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIM 461
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S++S+C + + G +H I G + DV V ++L+ MYSK + +F M
Sbjct: 462 ASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPL 521
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W ++IS Y + G D ++ LF M G PD V++ S++ L GK
Sbjct: 522 KNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAV 581
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
Y + ++ + NALIDMY KCG + A+ +F + + +V+W MIAGC +G++
Sbjct: 582 HGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDW 641
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
++A+ LF +M + P+ +TF+++L +C H GF+E+G F LMT + + P + HY
Sbjct: 642 LKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVN 701
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+ DLLGR G+L +A FV+++PI+ D IW +LLC+C++H N+E+G+ A++L ++EP
Sbjct: 702 IVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSR 761
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV++ N+Y D ANLR MK +KK PG S + + F D
Sbjct: 762 GSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGD 815
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/523 (27%), Positives = 254/523 (48%), Gaps = 13/523 (2%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV- 81
+ +I V + + AL + R N + T+P + KAC LS+ Y + IH I+
Sbjct: 21 DPKIVTLVQQGQYVDALQFYSR---NPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIIT 77
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-----RDVASWNAMIVGFAQMGFL 136
K F+SD ++ T++++ Y KC A K+FDK+P+ +DV WN+++ G+ + G
Sbjct: 78 KGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHK 137
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ + F M+L G++ D ++ L A+ HL K +H + + D + +
Sbjct: 138 KEGIAQFCRMQLFGVRPDAYSLCILLGAS--DGHLGYAKQIHGYSVRKVFYGDPFLESGL 195
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I Y C A +F+ +E+ VV+WN +IGG +++SL Y + +
Sbjct: 196 IYMYFSCGRPLDAWRLFKELEDK-GNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKL 254
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ S LS+C E + G VH + GF+ D V +L++MYSKC ++ A +F
Sbjct: 255 VSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVF 314
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + + W AMIS Y G + L+++ M+ PD +T +++S C G+ +
Sbjct: 315 DQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYD 374
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ ++ NV + +AL+ MYSKCG+ DA +F + + VV+W +MI+G
Sbjct: 375 FGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFC 434
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
N +++EAL+ ++ M +P+ +V+ ACT + G L K + ++
Sbjct: 435 QNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKS-GLEQDV 493
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
S + D+ + K + + MP+K+ + C C+
Sbjct: 494 FVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCR 536
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 256/524 (48%), Gaps = 13/524 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + + F RM+ + P+ + + A Y++ IHG+ V
Sbjct: 124 WNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASD--GHLGYAKQIHGYSV 181
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFLE--- 137
+ F+ D F+++ ++ MY C R A++LF ++ D+ +V +WN MI GF + G E
Sbjct: 182 RKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSL 241
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+V L N + + A F + + A + +S VH + +G + D VC + +
Sbjct: 242 EVYLLAKNENVKLVSASFTSTL---SACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLL 298
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y+KC ++ AE VF + ++ WN++I + D L Y+ M PD
Sbjct: 299 TMYSKCKLVEDAENVFDQVS--VKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPD 356
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
T ++LSSC + GRL+H+ + +V++ + L++MYSKCG+ D A +F+
Sbjct: 357 SLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFN 416
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ R V+W +MISG+ Q EAL + +M GE PD + S++S C + L
Sbjct: 417 TIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNL 476
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G A GL+ +V V ++L+DMYSK + +F +P K +V+W ++I+
Sbjct: 477 GCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCR 536
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG ++ LF QM + L P+ V+ +VL + + L KG + + ++ +L
Sbjct: 537 NGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIR-QRIPSDLQ 595
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + D+ + G LK A Q+M ++++ W ++ C H
Sbjct: 596 LENALIDMYIKCGFLKYAQHIFQNM-LQTNLVTWNIMIAGCGSH 638
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 189/613 (30%), Positives = 311/613 (50%), Gaps = 12/613 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
++I R ++ WNS + V A L + M + + ++ A
Sbjct: 52 FDEIPRPDAVS-WNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRSAAAARR 110
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ VKS ++F + ++D+YAKC RL A ++FD MP R+ SWNA+I G
Sbjct: 111 PELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAG 170
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+A+ + + LF M+ V + D T L SL++ +H G
Sbjct: 171 YAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALG 230
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY-RH 248
+ V N I+AY++C + +F GI+ R ++SWNS++G Y D+++ F+ R
Sbjct: 231 LVVLNAAITAYSQCGAFADSRRIFDGIQS--RDLISWNSMLGAYAYHGMDDEAMRFFVRM 288
Query: 249 MIYDGFRPDV---TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
M G +PD+ T+VVS+ S C + QGR +HS + G + V N +I+MY++
Sbjct: 289 MRESGVQPDMYSFTSVVSVCSEHGCDDR--QGRSIHSLVVKIGLEGVTHVCNAMIAMYTR 346
Query: 306 CGD---IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
+ ++ A FD + + VSW +M++GY+ G +ALR F M A D +
Sbjct: 347 FTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFAL 406
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ + C L LG+ + G N V ++LI MYSKCG +GDAR+ F +
Sbjct: 407 SAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADK 466
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+ V W +M+ G A +G+ DLF +M++ + + VTF+A+L A +H G +++G
Sbjct: 467 GSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEI 526
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
N M Y++ + HY+C DL GR G+L +A + ++SMP + DA +W TLL AC+IH
Sbjct: 527 LNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHG 586
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+E+ VA LF EP + YV ++++Y+ G W A ++ +MK + K PG S +
Sbjct: 587 NMELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWI 646
Query: 603 HINGKTCTFTVED 615
+ + +F +D
Sbjct: 647 EVKNEVHSFNADD 659
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 179/380 (47%), Gaps = 7/380 (1%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
L A ++FD++P D SWN+++ G L +M G+ A + ++
Sbjct: 45 LAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRS 104
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
A A+ L + SF + G+ +V + + YAKC L A VF G+ +R V
Sbjct: 105 AAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMP--VRNTV 162
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SWN++I G K ++ + M PD T +LL++ P + +H
Sbjct: 163 SWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKI 222
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
YG L + V+N I+ YS+CG +R +FDG+ R +SW +M+ YA G DEA+
Sbjct: 223 AKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAM 282
Query: 345 RLFFA-MEAAGEVPDLVTVLSMISGCGQSGALEL-GKWFDNYACSGGLKDNVMVCNALID 402
R F M +G PD+ + S++S C + G + G+ + GL+ VCNA+I
Sbjct: 283 RFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIA 342
Query: 403 MYSKCGS---IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
MY++ + DA + F +L K VSW +M+ G + +G +AL F M ++ +
Sbjct: 343 MYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTD 402
Query: 460 RVTFLAVLQACTHAGFLEKG 479
A L++C+ L G
Sbjct: 403 EFALSAALRSCSDLAVLRLG 422
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 297 NTLISMYSKCGD---IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
N L++ YS G + +AR +FD + VSW ++++ + G +A RL M A
Sbjct: 30 NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHAR 89
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G + S + + ELG ++A GL DNV +AL+D+Y+KCG + DA
Sbjct: 90 GLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDA 149
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
R +F +P + VSW +IAG A + + +A++LF +M ++L P+ TF A+L
Sbjct: 150 RRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATV--- 206
Query: 474 GFLEKGWGYFNLMTKVY 490
+G +++LM +++
Sbjct: 207 ----EGPSWYSLMQQLH 219
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 212/692 (30%), Positives = 321/692 (46%), Gaps = 104/692 (15%)
Query: 2 AASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIA 61
+ SSLP L I +ST + N Q H + + + L
Sbjct: 12 SPSSLPFHLRHI-STSTFTKPNPQ----------HFIHIFTNARNHQNHHDSELALVSAL 60
Query: 62 KACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD------------------ 103
K+C+ LS + IH I K + F+Q ++++MYAKC
Sbjct: 61 KSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSV 120
Query: 104 -------------RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
++D A KLFD MP++ S+ MI+GF Q GF + L +F +MR G
Sbjct: 121 SCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCG 180
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ + +T++ + A H + + VH + + V V V + AY C+ ++ A
Sbjct: 181 VVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREAR 240
Query: 211 LVFRGIEE----------------GL-------------RTVVSWNSIIGGCTYGDKFDD 241
+F + E GL + V+SW ++I G + +
Sbjct: 241 RLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLRE 300
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+L YR M+ G P+ +V+L+S+C A+V G +H + GFD + T+I
Sbjct: 301 ALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIY 360
Query: 302 MYSKCGDID--------------------SARFLFDGMCD-----------RTRVSWTAM 330
Y+ CG +D +A F+ +GM D R SW+ M
Sbjct: 361 FYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTM 420
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
ISGYAQ AL LF M A G P+ VT++S+ S G L+ GK Y S +
Sbjct: 421 ISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESI 480
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEK--TVVSWTTMIAGCALNGEFVEALDLF 448
N + ALIDMY+KCGSI A + F + ++ +V W +I G A +G L++F
Sbjct: 481 PFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVF 540
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
M ++PN +TF+ VL AC HAG +E G F M Y V P++ HY CM D+LGR
Sbjct: 541 SDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGR 600
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEM 568
G L+EA + ++SMP+++D IWGTLL AC+ H N+ IGE A L L P V +
Sbjct: 601 AGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLL 660
Query: 569 ANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
+NIYA G+W+ V+ +R++M+ + + PG S
Sbjct: 661 SNIYANAGKWEEVSFVRSVMQGQTMDREPGYS 692
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 190/596 (31%), Positives = 318/596 (53%), Gaps = 6/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W+S I V+ + L +FR M I P+++ +A+AC K+ ++ +HG+++
Sbjct: 171 WSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVM 230
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D + +++ MY++C L A +LF+ + DR + W +MI + Q E+ L
Sbjct: 231 REGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALD 290
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH--IGVDADVSVCNTWISA 199
+F M+ ++ + VT++ + + L KSVH F + +GV + + I
Sbjct: 291 VFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTG-LDLGPALIDF 349
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y+ C + E + I G +VSWN++I D+++ F+ M+ G PD
Sbjct: 350 YSACWKMSSCEKLLHSI--GNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSF 407
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
++ S +S+ ++ G+ +H H + GF D V N+L+ MYSKCG SA +F+ +
Sbjct: 408 SLASSISASASSGSIQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKI 466
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ V+W MI G++Q G EAL LF M + VT LS I C G L+ GK
Sbjct: 467 KHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGK 526
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
W + G ++++ + AL+DMY+KCG + A+++F ++ EK+VVSW+TMIA ++G
Sbjct: 527 WIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHG 586
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ A LFH+M+ +++PN VTF+ +L AC HAG +++G YFN M Y + P + H+
Sbjct: 587 QINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHF 646
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+ + DLL R G + A + ++S+ A IWG LL C+I+ +++ EY+A L +
Sbjct: 647 ASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGIST 706
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
Y ++NIYA GG W +R+ M+ +KK PG S V I+ K F D
Sbjct: 707 DDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGD 762
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 272/539 (50%), Gaps = 22/539 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN RE + H +M + +P + +A + + + + +HG I+
Sbjct: 76 WNHLFREVLSLFNHHI------QMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRIL 129
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F D + T++V MY + L A K+FD+M RD+ W+++I + + G + L
Sbjct: 130 KSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLE 189
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F +M GI+ D V ++ + +A L L KSVH + + G+ D S+ N+ I Y+
Sbjct: 190 MFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYS 249
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L A+ +F I++ R+ W S+I + F+++L+ + M P+ T+
Sbjct: 250 QCGYLCRAKRLFECIDD--RSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTM 307
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIH-----YGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+S+L+SC L +G+ VH + G DL + LI YS C + S L
Sbjct: 308 ISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPA----LIDFYSACWKMSSCEKLL 363
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + VSW +IS YA++G DEA+ F M A G +PD ++ S IS SG+++
Sbjct: 364 HSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQ 423
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ + G D V N+L+DMYSKCG A +F + K++V+W MI G +
Sbjct: 424 FGQQIHGHVMKRGFFDE-FVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFS 482
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPE 495
NG VEAL LF +M + L N+VTFL+ +QAC++ G+L+KG W + ++ Q +
Sbjct: 483 QNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLY 542
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
++ + + D+ + G L+ A S+ KS W T++ A IH I + +++
Sbjct: 543 ID--TALVDMYAKCGDLQTAQKVFDSIVEKSVVS-WSTMIAAHGIHGQINAATSLFHKM 598
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 182/372 (48%), Gaps = 15/372 (4%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+ I WN+ I + +A+ F M I P++ + A A + Q
Sbjct: 368 NENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQ 427
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IHGH++K F+ D FVQ +++DMY+KC AY +F+K+ + + +WN MI GF+Q G
Sbjct: 428 IHGHVMKRGFF-DEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGI 486
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M ++ + VT + QA + +L K +H I G D+ +
Sbjct: 487 SVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTA 546
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC DL+ A+ VF I E ++VVSW+++I + + + + + M+ +
Sbjct: 547 LVDMYAKCGDLQTAQKVFDSIVE--KSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIK 604
Query: 256 PDVTTVVSLLSSCVCPEALVQGRL-VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P+ T +++LS+C ++ +G+ ++ +YG +V +++ + S+ GDI+ A
Sbjct: 605 PNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYE 664
Query: 315 LFDGMCDRTRVS---WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+ + RT V+ W A+++G G +D + + A E G D +++S
Sbjct: 665 IIKSI--RTPVAASIWGALLNGCRIYGRMD--MIEYIAEELGGISTDDTGYYTLLSNIYA 720
Query: 372 SGALELGKWFDN 383
G G W+++
Sbjct: 721 EG----GNWYES 728
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 185/388 (47%), Gaps = 6/388 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H H+V + ++ T +++ Y++ L + +F P D ++ +I
Sbjct: 20 LHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHL 79
Query: 136 LEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+VL LF + +G Q + +A L + + +H + G D +
Sbjct: 80 FREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVI 139
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ + Y + L+ A+ VF E +R +V W+SII + + L +R MI +
Sbjct: 140 GTSLVGMYGELCFLRDAKKVFD--EMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICE 197
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
G RPD ++S+ +C L + VH + + G D S+ N+LI MYS+CG + A
Sbjct: 198 GIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRA 257
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+ LF+ + DR+ WT+MIS Y Q +EAL +F M+ + P+ VT++S+++ C +
Sbjct: 258 KRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARL 317
Query: 373 GALELGKWFDNYACSGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
G L+ GK + + + + ALID YS C + +L +++ + +VSW T+
Sbjct: 318 GRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTL 377
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPN 459
I+ A G EA+ F M+ + P+
Sbjct: 378 ISFYAREGLNDEAMAFFACMVAKGIMPD 405
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
ASS NKI + +I WN I + +AL LF M KN +E N +TF +
Sbjct: 456 ASSAYTIFNKI-KHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQ 514
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
AC+ L + IH I+ + +D+++ T +VDMYAKC L A K+FD + ++ V S
Sbjct: 515 ACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVS 574
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK-SVHSFG 181
W+ MI G + LF+ M L I+ + VT M + A HA + K ++
Sbjct: 575 WSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMR 634
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ G+ +V + + ++ D+ A + + I + + W +++ GC + D
Sbjct: 635 DYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASI-WGALLNGCRIYGRMD 692
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 254/449 (56%), Gaps = 6/449 (1%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+HLS + H+ I +++ ++ I+ Y+ +D A VF GI R VVSWN+
Sbjct: 144 RHLSPV--AHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPS--RDVVSWNA 199
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++ + R M+ DG P+ T+ +L++C LV GR V
Sbjct: 200 MMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSA 259
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G + D V + L+ MY KCG+I AR +FD + D+ V+W AMI+GYAQ G +EA+ LF
Sbjct: 260 GMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLF 319
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M+ AG PD +T+ ++S C GALELG D YA GL +NV V AL+DMY+KC
Sbjct: 320 HNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKC 379
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAV 466
G + A E+F + K V SW +I G A NG+ EA+ F M D L+P+ +TF+ V
Sbjct: 380 GDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGV 439
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
L AC HAG ++ G +FN +T +Q+ P++ HYSCM DLL R G L+E DF++ +P K
Sbjct: 440 LSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKV 499
Query: 527 DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRT 586
DA + G LL AC+ +N+EIGE V R+ +LEP ++ YV + IYA GR D A +R
Sbjct: 500 DAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRG 559
Query: 587 MMKRNQVKKFPGQSLVHINGKTCTFTVED 615
M+ V K PG S V I+GK F D
Sbjct: 560 PMRERGVNKTPGCSWVEISGKVLEFYAGD 588
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 172/346 (49%), Gaps = 6/346 (1%)
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG-IQ 152
+++ +Y+ D A K+F+ +P RDV SWNAM+ + ++G +V + +M G +
Sbjct: 168 SLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAVV 227
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
+ VT+ + A L L + V + G++ D V + + Y KC ++ A V
Sbjct: 228 PNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCGEIAEARRV 287
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F I + + VV+WN++I G +++++ + +M G PD T+ +LS+C
Sbjct: 288 FDSIID--KDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVG 345
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G + + G +V V L+ MY+KCGD+D A +F M + SW A+I
Sbjct: 346 ALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALIC 405
Query: 333 GYAQKGDLDEALRLFFAMEAA-GEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGL 390
G A G DEA++ F M G PD +T + ++S C +G ++ GK WF++ +
Sbjct: 406 GLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQI 465
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGC 435
+ + ++D+ ++ G + + + +P+K V ++A C
Sbjct: 466 IPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALLAAC 511
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQ 74
S + WN+ ++ + + R M K+ + PN +T + AC D + +
Sbjct: 191 SRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGR 250
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ + +D V + +V MY KC + A ++FD + D+DV +WNAMI G+AQ G
Sbjct: 251 WVEEWSKSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNG 310
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + LF+NM+ G+ D +T+ G+ A L L + + G+ +V V
Sbjct: 311 MSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGT 370
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDG 253
+ YAKC DL A VFR + + V SWN++I G + + D+++ + M DG
Sbjct: 371 ALVDMYAKCGDLDKAIEVFRKMR--CKNVASWNALICGLAFNGQGDEAIQHFELMRNEDG 428
Query: 254 FRPDVTTVVSLLSSCV 269
+PD T + +LS+CV
Sbjct: 429 LKPDDITFIGVLSACV 444
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I +++A+ LF MKK + P+ +T + AC+ + + G+
Sbjct: 299 WNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYAS 358
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+++++V T +VDMYAKC LD A ++F KM ++VASWNA+I G A G ++ +
Sbjct: 359 CRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQ 418
Query: 142 LFYNMRLV-GIQADFVTVMGLTQAAIHA-----------------------KHLSL---- 173
F MR G++ D +T +G+ A +HA +H S
Sbjct: 419 HFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDL 478
Query: 174 ------LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
L+ V F I D + ++A KC ++++ E V I + L SWN
Sbjct: 479 LARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQ-LEPTNSWN 537
Query: 228 SIIGGCTYGD--KFDDS 242
++ Y + DDS
Sbjct: 538 YVVSSKIYASSGRLDDS 554
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 291/550 (52%), Gaps = 11/550 (2%)
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD--RDVASWNAMIVG 129
++ IH I+ + + S F+ ++++YAKC L+ A LF + + +W ++I
Sbjct: 160 HATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITH 219
Query: 130 FAQMGFLEKVLCLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
+ + L LF MR G Q F +++ + A + H + +HS G
Sbjct: 220 LSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG---QQLHSLIHKHGF 276
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
DA++ V + YAKC D+ A VF + E R +VSWNS+I G + + +D ++ +
Sbjct: 277 DANIFVGTALVDMYAKCADMHSAVRVFDQMPE--RNLVSWNSMIVGFFHNNLYDRAVGVF 334
Query: 247 RHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ ++ + P+ +V S+LS+C L GR VH + YG V+N+L+ MY K
Sbjct: 335 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFK 394
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
C D LF + DR V+W ++ G+ Q +EA F+ M G +PD + ++
Sbjct: 395 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ AL G + G N+ + +LI MY+KCGS+ DA ++F + + V
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 514
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
+SWT MI+ L+G + ++LF M+ + P+ VTF+ VL AC+H G +E+G +FN
Sbjct: 515 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 574
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M K++ +NP HY+CM DLLGR G L EA F++SMP+K +WG LL AC+ + N++
Sbjct: 575 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK 634
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+G A RLFE+EP++ YV +AN+ GR + +R +M N V+K PG S + +
Sbjct: 635 MGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVK 694
Query: 606 GKTCTFTVED 615
T FT D
Sbjct: 695 NMTFVFTAHD 704
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 233/466 (50%), Gaps = 8/466 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI W S I N +AL LF +M+ + PN TF I A A L+ Q +H
Sbjct: 209 TIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLH 268
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I K F ++IFV T +VDMYAKC + A ++FD+MP+R++ SWN+MIVGF +
Sbjct: 269 SLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYD 328
Query: 138 KVLCLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ + +F + +R + + V+V + A + L+ + VH + G+ V N+
Sbjct: 329 RAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSL 388
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y KC +F+ + G R VV+WN ++ G DKF+++ N++ M +G P
Sbjct: 389 MDMYFKCRFFDEGVKLFQCV--GDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILP 446
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + ++L S AL QG +H I G+ ++ ++ +LI+MY+KCG + A +F
Sbjct: 447 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVF 506
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+G+ D +SWTAMIS Y G ++ + LF M + G P VT + ++S C +G +E
Sbjct: 507 EGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 566
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAG 434
G F++ + ++D+ + G + +A+ ++P K S W ++
Sbjct: 567 EGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGA 626
Query: 435 CALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKG 479
C G + ++ E++ P LA + CT +G LE+
Sbjct: 627 CRKYGNLKMGREAAERLFEMEPYNPGNYVLLANM--CTRSGRLEEA 670
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-- 321
LL++ + +L +H+ I + + N LI++Y+KCG ++ A LF
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+T V+WT++I+ + +AL LF M +G P+ T S++S + + G+
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G N+ V AL+DMY+KC + A +F +PE+ +VSW +MI G N +
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327
Query: 442 VEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLEKG 479
A+ +F ++ E + PN V+ +VL AC + G L G
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG 366
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 301/596 (50%), Gaps = 11/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + AL +F M ++ + PN+ ACA L + +H V
Sbjct: 9 WTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAV 68
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F D ++ + +++MY++C L A ++FD+M DV + ++I F + G E
Sbjct: 69 RAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE 128
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDADVSVCNT-WISA 199
M G++ + T+ + A L + +H + I IG+ + +T I
Sbjct: 129 ALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDF 184
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y++ + K+A+ VF + + VVSW S++ + +++L + MI +G P+
Sbjct: 185 YSRNGEFKLAKAVFDSLH--CKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEF 242
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ +L +C ++ GR +H I + D+ V N L+SMY + G ++ + + +
Sbjct: 243 ALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI 299
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ VSWT IS Q G ++A+ L M + G P+ S++S C +L+ G
Sbjct: 300 ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM 359
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
F A G + NALI+MYSKCG +G AR F + V SW ++I G A +G
Sbjct: 360 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 419
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ +AL++F +M ++P+ TFL VL C H+G +E+G +F LM Y P +HY
Sbjct: 420 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHY 479
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM D+LGR G+ EAL + MP + DA IW TLL +CK+HRN++IG+ A RL EL
Sbjct: 480 ACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 539
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV M+NIYA+ G W+ +R M VKK G S + IN + TF D
Sbjct: 540 RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRD 595
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 149/322 (46%), Gaps = 17/322 (5%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ VV+W S++ G T + + +L + M+ G P+ + L +C AL G V
Sbjct: 4 KNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQV 63
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
HS + GF D + + LI MYS+CG + +A+ +FD M V +T++IS + + G+
Sbjct: 64 HSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEF 123
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG-GLK-DNVMVCN 398
+ A M G P+ T+ ++++ C + LG+ Y GL+ +V
Sbjct: 124 ELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSST 179
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
ALID YS+ G A+ +F +L K VVSW +M+ +G EAL +F M+ + P
Sbjct: 180 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 239
Query: 459 NRVTFLAVLQACTHAGF---LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
N VL AC G L +L+T + N L+ Y GR G L E
Sbjct: 240 NEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMY-------GRTG-LVEE 291
Query: 516 LDFVQSMPIKSDAGIWGTLLCA 537
L+ + + D W T + A
Sbjct: 292 LEAMLNKIENPDLVSWTTAISA 313
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+P K VV+WT++++G NG AL +F M+E + PN A L AC G L G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 480 WGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
+L + + + + SC+ ++ R G L A + M
Sbjct: 61 EQVHSLAVRAGFAGDAWIG--SCLIEMYSRCGSLPAAKEVFDRM 102
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC-----AKL 67
+ + + WNS I +A+KAL +F +M+ N I+P++ TF + C +
Sbjct: 399 VMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEE 458
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAM 126
+ + MI + F M+DM + R D A ++ + MP + D W +
Sbjct: 459 GELFFRLMIDQY----SFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 514
Query: 127 I 127
+
Sbjct: 515 L 515
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 266/471 (56%), Gaps = 7/471 (1%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
M +GIQ D T + +A +H +H + G + V + N+ I+ Y KC+
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+++ VF + + + VSW++IIG C D+ + + +R M+ +G RP + ++L
Sbjct: 61 YELSRQVFDEMPD--KNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAIL 115
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
++ C + + V+ + G D D SV + M+++CG ++ AR LFDG+ + V
Sbjct: 116 NAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLV 175
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
+W I Y + EAL L M G PD +T+L +I C + +L
Sbjct: 176 TWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGII 235
Query: 386 CSGGLKDNVM-VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
+G + ++ V ALID+Y KCGS+ AR++F + E+ +++W+ MI+G ++G EA
Sbjct: 236 TTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREA 295
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L+LF QM + ++P+ +TF+++L AC+H+G + +GW FN M + + V P HY+CM D
Sbjct: 296 LNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVD 354
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
+LGR GKL EA DF++ MP++ +A +WG LL AC+IH N+++ E VA LF+L+PH+A
Sbjct: 355 ILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGR 414
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YV + NIY L G+ ++RT+MK VKK G S++ I K F D
Sbjct: 415 YVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGD 465
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 207/400 (51%), Gaps = 15/400 (3%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M + I+P+N TFPFI KAC+ L F + IH +VK + S +F+ +++ MY KCD+
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
+ + ++FD+MPD++ SW+A+I Q ++ LF M G + ++ A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILN-AMA 119
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ + + V+ + G+D D SV + +A+C +++A +F GI + +V
Sbjct: 120 CVRSHEEA--DDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMS--KDLV 175
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH-SH 283
+W + I D ++L + M+ G PD T++ ++ +C L +L H H
Sbjct: 176 TWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRAC---STLASFQLAHIVH 232
Query: 284 GI---HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
GI + ++ ++V LI +Y KCG + AR +FDGM +R ++W+AMISGY G
Sbjct: 233 GIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWG 292
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNA 399
EAL LF M+A+ + PD +T +S++S C SG + G + F++ A G+
Sbjct: 293 REALNLFDQMKASVK-PDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYAC 351
Query: 400 LIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALN 438
++D+ + G + +A + +P + W ++ C ++
Sbjct: 352 MVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W + I V + +AL L ++M I P+ +T + +AC+ L+ F + +
Sbjct: 171 SKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHI 230
Query: 76 IHGHIVKSPFWSDIF-VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+HG I F++ + V+T ++D+Y KC L A K+FD M +R++ +W+AMI G+ G
Sbjct: 231 VHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHG 290
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + L LF M+ ++ D +T + + A H+
Sbjct: 291 WGREALNLFDQMK-ASVKPDHITFVSILSACSHS 323
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 186/515 (36%), Positives = 286/515 (55%), Gaps = 12/515 (2%)
Query: 111 LFDKMPDR-DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LF++ D+ DV SWN++I A+ G + L F +MR + + + +A
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ K H G +D+ V + I Y+ C L+ A VF I + R +VSW S+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK--RDIVSWTSM 148
Query: 230 IGGCTYGDKFDDSLNFYRHMIYD------GFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
I G D+++ ++ ++ D D +VS++S+C A +HS
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 284 GIHYGFDLDVSVINTLISMYSKCGD--IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
I GFD VSV NTL+ Y+K G+ + AR +FD + D+ RVS+ +++S YAQ G +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 342 EALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
EA +F + V + +T+ +++ SGAL +GK + GL+D+V+V ++
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
IDMY KCG + AR+ F + K V SWT MIAG ++G +AL+LF M++ +RPN
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+TF++VL AC+HAG +GW +FN M + V P L HY CM DLLGR G L++A D +Q
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
M +K D+ IW +LL AC+IH+N+E+ E RLFEL+ + Y+ +++IYA GRW
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +R +MK + K PG SL+ +NG+ F + D
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 233/463 (50%), Gaps = 15/463 (3%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+L N+ + + WNS I + ++ +ALL F M+K + P +FP KAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
+ L D + H + SDIFV + ++ MY+ C +L+ A K+FD++P RD+ SW
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWT 146
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQAD----FVTVMGLT---QAAIHAKHLSLLKSV 177
+MI G+ G + LF ++ LV D F+ MGL A L +S+
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 178 HSFGIHIGVDADVSVCNTWISAYAKCND--LKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
HSF I G D VSV NT + AYAK + + +A +F I + R VS+NSI+
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVYAQ 263
Query: 236 GDKFDDSLNFYRHMIYDGFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+++ +R ++ + + T+ ++L + AL G+ +H I G + DV
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V ++I MY KCG +++AR FD M ++ SWTAMI+GY G +AL LF AM +G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 355 EVPDLVTVLSMISGCGQSG-ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
P+ +T +S+++ C +G +E +WF+ G++ + ++D+ + G + A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 414 RELFYALPEKT-VVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+L + K + W++++A C ++ A ++ ELD
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 231/398 (58%), Gaps = 6/398 (1%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD---VTTVVSLLSSCVCPEALVQG 277
R VSWN++I GC + ++L+ R M DGF PD ++TV+ + + C + +G
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECA---DIKRG 189
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+VH + I GFD DV V ++LI MY+ C +D + +FD D V W +M++GYAQ
Sbjct: 190 MVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQN 249
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G ++EAL +F M AG P VT S+I G L LGK Y DN+ +
Sbjct: 250 GSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFIS 309
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
++LIDMY KCG++ AR +F + +VSWT MI G AL+G EA LF +M +++
Sbjct: 310 SSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVK 369
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN +TFLAVL AC+HAG ++ GW YFN M+ Y P L H + +AD LGR G L EA +
Sbjct: 370 PNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYN 429
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F+ M IK + +W TLL AC++H+N + E VA ++FELEP S +V ++N+Y+ GR
Sbjct: 430 FISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGR 489
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W+ A LR M+ +KK P S + + K F D
Sbjct: 490 WNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHD 527
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 217/461 (47%), Gaps = 28/461 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNN---LTFPFIAKACAKLSDFLYSQMIHG 78
W QIR A + + A+ LF +M+ + + P + + P K+CA L + +H
Sbjct: 15 WAYQIRMAASQGQFLHAISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRL----------------DCAY----KLFDKMPDR 118
++S ++D F ++++ K AY K+FD+M +R
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
D SWN +I+G A+ ++ L + M G D T+ + + VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ I G D DV V ++ I YA C + + VF + V WNS++ G
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC--DAVLWNSMLAGYAQNGS 251
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+++L +R M+ G RP T SL+ + L G+ +H++ I F+ ++ + ++
Sbjct: 252 VEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSS 311
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
LI MY KCG++D AR +F+G+ VSWTAMI GYA G EA LF ME P+
Sbjct: 312 LIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPN 371
Query: 359 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+T L++++ C +G ++ G K+F++ + G ++ C AL D + G + +A
Sbjct: 372 HITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFI 431
Query: 418 YALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+ K S W+T++ C ++ V A ++ ++ EL+ +
Sbjct: 432 SEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPK 472
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%)
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+S R +FD M +R VSW +I G A+ EAL + M G +PD T+ +++
Sbjct: 121 ESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 180
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ ++ G YA G ++V V ++LIDMY+ C + + ++F + + V W
Sbjct: 181 AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWN 240
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+M+AG A NG EAL +F +M++ +RP VTF +++ A + L G
Sbjct: 241 SMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 313/602 (51%), Gaps = 4/602 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+I S + WN I +L L+ K N ++ + +F AC++ +
Sbjct: 230 EIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSG 289
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ + IH +VK +D +V T+++ MY+KC + A +F + D+ + WNAM+ +A
Sbjct: 290 FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+ + L LF MR + D T+ + + KSVH+ + + +
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST 409
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ + ++ Y+KC A LVF+ +EE + +V+W S+I G KF ++L + M
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEE--KDMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 252 D--GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
D +PD + S+ ++C EAL G VH I G L+V V ++LI +YSKCG
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP 527
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ A +F M V+W +MIS Y++ + ++ LF M + G PD V++ S++
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ +L GK Y G+ + + NALIDMY KCG A +F + K++++W
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWN 647
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
MI G +G+ + AL LF +M + P+ VTFL+++ AC H+GF+E+G F M +
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Y + P + HY+ M DLLGR G L+EA F+++MPI++D+ IW LL A + H N+E+G
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGIL 767
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
A +L +EP + YV++ N+Y G + A L +MK + K PG S + ++ +T
Sbjct: 768 SAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTN 827
Query: 610 TF 611
F
Sbjct: 828 VF 829
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 158/538 (29%), Positives = 248/538 (46%), Gaps = 24/538 (4%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEP---NNLTFPFIAKACAKLSDFLYSQMIHGH 79
NS IR + K E +AL L+ K + P + TFP + KAC+ L++ Y + IHG
Sbjct: 28 NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD-------KMPDRDVASWNAMIVGFAQ 132
+V + D F+ T++V+MY KC LD A ++FD + RDV WN+MI G+ +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADV 190
++ + F M + G++ D ++ + + K +H F + +D D
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+ I Y K A VF IE+ VV WN +I G + SL+ Y
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDK-SNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ + T+ L +C E GR +H + G D V +L+SMYSKCG +
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
A +F + D+ W AM++ YA+ AL LF M +PD T+ ++IS C
Sbjct: 325 EAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCS 384
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G GK ++ + +AL+ +YSKCG DA +F ++ EK +V+W +
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGS 444
Query: 431 MIAGCALNGEFVEALDLFHQMMELD--LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+I+G NG+F EAL +F M + D L+P+ +V AC L G M K
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 489 VYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
V LN + S + DL + G + AL SM ++ W +++ +C N+
Sbjct: 505 TGLV---LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMI-SCYSRNNL 557
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 289/545 (53%), Gaps = 7/545 (1%)
Query: 76 IHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H H++++ + + + +V+MYAK + A +F+ M ++D SWN++I G Q
Sbjct: 408 VHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNE 467
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E F+ MR G T++ + + L + +H G+ +G+D DVSV N
Sbjct: 468 CSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSN 527
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGD-KFDDSLNFYRHMIYDG 253
++ YA+ VF + E VSWNS+IG + + ++ ++ M+ G
Sbjct: 528 ALLALYAETGCFTECLKVFSLMPE--YDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGG 585
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+ T +++LS+ +H+ + Y D ++ N L+S Y KCG+++
Sbjct: 586 WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECE 645
Query: 314 FLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+F M + R VSW +MISGY L +A+ L + M G+ D T +++S C
Sbjct: 646 KIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASV 705
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
LE G L+ +V+V +AL+DMYSKCG I A F +P + V SW +MI
Sbjct: 706 ATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMI 765
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
+G A +G +AL LF +MM P+ VTF+ VL AC+H GF+E+G+ +F M++VY++
Sbjct: 766 SGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRL 825
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC--KIHRNIEIGEYV 550
+P + H+SCM DLLGR GKL E DF+ SMP+K + IW T+L AC RN E+G
Sbjct: 826 SPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRA 885
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
A L ELEP +A YV +AN+YA G +W+ VA RT MK VKK G S V +
Sbjct: 886 AEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHV 945
Query: 611 FTVED 615
F D
Sbjct: 946 FVAGD 950
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 217/449 (48%), Gaps = 9/449 (2%)
Query: 22 WNSQIREAVDKNE-AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I +D+NE + A F RM++ P+N T +CA L + + IH
Sbjct: 456 WNSLI-SGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDG 514
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA-QMGFLEKV 139
+K +D+ V ++ +YA+ K+F MP+ D SWN++I + + +
Sbjct: 515 LKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQA 574
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ F M G VT + + A + +H+ + + D ++ N +S
Sbjct: 575 VKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSC 634
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC ++ E +F + E R VSWNS+I G + + +++ M+ G R D
Sbjct: 635 YGKCGEMNECEKIFARMSE-TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSF 693
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T ++LS+C L +G VH+ GI + DV V + L+ MYSKCG ID A F+ M
Sbjct: 694 TFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM 753
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
R SW +MISGYA+ G ++AL+LF M G+ PD VT + ++S C G +E G
Sbjct: 754 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGF 813
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMI-AGCA 436
+ F + + L V + ++D+ + G + + + ++P K V+ W T++ A C
Sbjct: 814 EHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCR 873
Query: 437 LNGEFVEALDLFHQMMELDLRP-NRVTFL 464
NG E +M+ L+L P N V ++
Sbjct: 874 ANGRNTELGRRAAEML-LELEPQNAVNYV 901
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 237/513 (46%), Gaps = 65/513 (12%)
Query: 2 AASSLPPRLNKIYRSSTINQWNSQIREAVD---KNEAHKALLLFRRMKKNDIEPNNLTFP 58
AS PP + +++ NQ +++ VD + +H LF + + +L
Sbjct: 25 TASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFE----SLINR 80
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
+ C++ ++ +H +K F ++F+ T++++Y + L A KLFD+M +R
Sbjct: 81 YQGSCCSE-----EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNR 135
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS------ 172
++ +W +I G+ Q G ++ F +M ++A F+ +A+ A S
Sbjct: 136 NLVTWACLISGYTQNGKPDEACARFRDM----VRAGFIPNHYAFGSALRACQESGPSGCK 191
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCND-LKMAELVFRGIEEGLRTVVSWNSIIG 231
L +H +DV VCN IS Y C D A VF GI G+R +SWNSII
Sbjct: 192 LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGI--GIRNSISWNSIIS 249
Query: 232 GCTYGDKFD--DSLNFYRHMIYDG----FRPDVTTVVSLLSS---------CVCPEALVQ 276
Y + D + + + M +G F+P+ T SL+++ CV + L
Sbjct: 250 --VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQML-- 305
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
R+ S GF D+ V + L+S +++ G D A+ +F+ M R VS ++ G +
Sbjct: 306 ARVEKS-----GFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK 360
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLS-----MISGCGQSGALE----LGKWFDNYACS 387
+ + A ++F M+ DLV + S ++S + LE G+ +
Sbjct: 361 QKQGEAAAKVFHEMK------DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 414
Query: 388 GGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
GL DN V + N L++MY+K G+I DA +F + EK VSW ++I+G N +A +
Sbjct: 415 TGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAE 474
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
FH+M P+ T ++ L +C G++ G
Sbjct: 475 SFHRMRRTGSMPSNFTLISTLSSCASLGWIMLG 507
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 276/523 (52%), Gaps = 4/523 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN I V + A+ +FR M + PN F + AC D+ + +HG +
Sbjct: 169 SWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMV 228
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V++ + D+F +VDMY+K ++ A +F+K+P DV SWNA+I G G + L
Sbjct: 229 VRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRAL 288
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M+ +G+ + T+ + +A A +L + +H F I D+D V + Y
Sbjct: 289 ELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMY 348
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV-- 258
AK L A VF + R ++ WN++I GC++ + + L+ + M +G DV
Sbjct: 349 AKDGFLDDARKVFDFMPR--RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNR 406
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TT+ ++L S EA+ + VH+ G D V+N LI Y KCG +D A +F+
Sbjct: 407 TTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEE 466
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
C +S T+M++ +Q ++A++LF M G PD + S+++ C A E G
Sbjct: 467 SCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQG 526
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
K + +V NAL+ Y+KCGSI DA F LPEK VVSW+ MI G A +
Sbjct: 527 KQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQH 586
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G AL+LFH+M++ + PN +T +VL AC HAG ++ YF M + + ++ H
Sbjct: 587 GHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEH 646
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
Y+CM D+LGR GKLK+A++ V +MP +++A +WG LL A +++
Sbjct: 647 YACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLGASRLN 689
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 6/427 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
++ + WN+ I V H+AL L +MK + PN T + KACA F +
Sbjct: 265 AADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQ 324
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IHG ++K+ SD FV +VDMYAK LD A K+FD MP RD+ WNA+I G + G
Sbjct: 325 IHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGR 384
Query: 136 LEKVLCLFYNMRLVGIQADF--VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+VL LF+ MR G+ D T+ + ++ + + K VH+ IG+ +D V
Sbjct: 385 HGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVV 444
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I +Y KC L A VF E ++S S++ + D +D++ + M+ G
Sbjct: 445 NGLIDSYWKCGRLDYAIKVFE--ESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKG 502
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD + SLL++C A QG+ VH+H I F DV N L+ Y+KCG I+ A
Sbjct: 503 LEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDAD 562
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F G+ ++ VSW+AMI G AQ G AL LF M G P+ +T+ S++S C +G
Sbjct: 563 MAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAG 622
Query: 374 AL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
+ + K+F++ + G+ +ID+ + G + DA EL +P + W +
Sbjct: 623 LVDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGAL 682
Query: 432 IAGCALN 438
+ LN
Sbjct: 683 LGASRLN 689
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 197/402 (49%), Gaps = 8/402 (1%)
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
L +H H++KS + ++ Y++C A +FD++PD SW++++
Sbjct: 20 LLAGAHLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLVTA 77
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
++ G L F +MR G+ + + + + A + VH+ + + D
Sbjct: 78 YSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDVR---FGAQVHALAVATRLIQD 134
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V V N ++ Y + A+ +F G R VSWN +I D+ D++ +R M
Sbjct: 135 VFVTNALVAMYGGFGMVDEAKRIFDE-PGGERNAVSWNGMISAYVKNDRCRDAVGVFREM 193
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
++ G RP+ ++++C GR VH + G+D DV N L+ MYSK GDI
Sbjct: 194 VWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDI 253
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+ A +F+ + VSW A+I+G G AL L M+ G VP++ T+ S++ C
Sbjct: 254 EMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKAC 313
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+GA LG+ + + V L+DMY+K G + DAR++F +P + ++ W
Sbjct: 314 AGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWN 373
Query: 430 TMIAGCALNGEFVEALDLFHQMME--LDLRPNRVTFLAVLQA 469
+I+GC+ +G E L LFH+M + LDL NR T AVL++
Sbjct: 374 ALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKS 415
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 202/462 (43%), Gaps = 8/462 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+S + + AL FR M+ + N P + K CA D + +H
Sbjct: 70 SWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK-CAP--DVRFGAQVHALA 126
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM-PDRDVASWNAMIVGFAQMGFLEKV 139
V + D+FV +V MY +D A ++FD+ +R+ SWN MI + +
Sbjct: 127 VATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDA 186
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+ +F M G + + + A ++ + VH + G D DV N +
Sbjct: 187 VGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDM 246
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y+K D++MA +VF I VVSWN++I GC +L M G P+V
Sbjct: 247 YSKLGDIEMAAVVFEKIPAA--DVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVF 304
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ S+L +C A GR +H I D D V L+ MY+K G +D AR +FD M
Sbjct: 305 TLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFM 364
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL--VTVLSMISGCGQSGALEL 377
R + W A+ISG + G E L LF M G D+ T+ +++ A+
Sbjct: 365 PRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICH 424
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
K A GL + V N LID Y KCG + A ++F ++S T+M+ +
Sbjct: 425 TKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQ 484
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+A+ LF QM+ L P+ ++L AC E+G
Sbjct: 485 CDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQG 526
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 173/394 (43%), Gaps = 16/394 (4%)
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
MR G + G +++ + HL HS + G+ A S N +S Y++C
Sbjct: 1 MRTPGTIGSALARFGASRSLLAGAHL------HSHLLKSGLLASYS--NHLLSFYSRCRL 52
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
A VF I + VSW+S++ + D+L +R M G + + +L
Sbjct: 53 PSAARAVFDEIPDPCH--VSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVL 110
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC-DRTR 324
C + G VH+ + DV V N L++MY G +D A+ +FD +R
Sbjct: 111 K---CAPDVRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNA 167
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
VSW MIS Y + +A+ +F M +GE P+ +++ C S E G+
Sbjct: 168 VSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGM 227
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
G +V NAL+DMYSK G I A +F +P VVSW +IAGC +G A
Sbjct: 228 VVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRA 287
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L+L QM L + PN T +VL+AC AG G M K + E + D
Sbjct: 288 LELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVG-LVD 346
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+ + G L +A MP + D +W L+ C
Sbjct: 347 MYAKDGFLDDARKVFDFMP-RRDLILWNALISGC 379
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 287/527 (54%), Gaps = 12/527 (2%)
Query: 86 WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN 145
W ++ ++DMY KC AYK+FD MP+R+V SW+A++ G G L+ L LF
Sbjct: 409 WLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSE 468
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
M GI + T +A L +H F + IG + V V N+ + Y+KC
Sbjct: 469 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 528
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGG---CTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
+ AE VFR I + R+++SWN++I G YG K D+ + RPD T+
Sbjct: 529 INEAEKVFRRIVD--RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE-RPDEFTLT 585
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS--VINTLISMYSKCGDIDSARFLFDGMC 320
SLL +C + G+ +H + GF S + +L+ +Y KCG + SAR FD +
Sbjct: 586 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 645
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
++T +SW+++I GYAQ+G+ EA+ LF ++ D + S+I L GK
Sbjct: 646 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 705
Query: 381 FDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
A GL+ +V+ N+++DMY KCG + +A + F + K V+SWT +I G +
Sbjct: 706 MQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 763
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +++ +F++M+ ++ P+ V +LAVL AC+H+G +++G F+ + + + + P + H
Sbjct: 764 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 823
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ DLLGR G+LKEA + +MPIK + GIW TLL C++H +IE+G+ V L ++
Sbjct: 824 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 883
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+ A YV M+N+Y G W+ N R + +KK G S V I
Sbjct: 884 AKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIE 930
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 231/477 (48%), Gaps = 17/477 (3%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
S+P R + W++ + V + +L LF M + I PN TF KAC
Sbjct: 437 SMPER--------NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC 488
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
L+ IHG +K F + V ++VDMY+KC R++ A K+F ++ DR + SWN
Sbjct: 489 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 548
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
AMI GF G+ K L F M+ I+ D T+ L +A + K +H F +
Sbjct: 549 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 608
Query: 183 HIGV--DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
G + ++ + + Y KC L A F I+E +T++SW+S+I G +F
Sbjct: 609 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE--KTMISWSSLILGYAQEGEFV 666
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+++ ++ + + D + S++ L QG+ + + + L+ SV+N+++
Sbjct: 667 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 726
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY KCG +D A F M + +SWT +I+GY + G +++R+F+ M PD V
Sbjct: 727 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 786
Query: 361 TVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
L+++S C SG ++ G + F + G+K V ++D+ + G + +A+ L
Sbjct: 787 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 846
Query: 420 LPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+P K V W T+++ C ++G+ ++ ++ +D + N ++ + AG+
Sbjct: 847 MPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK-NPANYVMMSNLYGQAGY 902
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 167/439 (38%), Positives = 249/439 (56%), Gaps = 3/439 (0%)
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH+ + D+ + NT ++ YAKC L+ A VF + + R V+W ++I G +
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ--RDFVTWTTLISGYSQH 139
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D+ D+L F+ M+ G+ P+ T+ S++ + G +H + GFD +V V
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+ L+ +Y++ G +D A+ +FD + R VSW A+I+G+A++ ++AL LF M G
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P + S+ C +G LE GKW Y G K N L+DMY+K GSI DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F L ++ VVSW +++ A +G EA+ F +M + +RPN ++FL+VL AC+H+G L
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
++GW Y+ LM K V PE HY + DLLGR G L AL F++ MPI+ A IW LL
Sbjct: 380 DEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
AC++H+N E+G Y A +FEL+P P+V + NIYA GGRW+ A +R MK + VKK
Sbjct: 439 ACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKE 498
Query: 597 PGQSLVHINGKTCTFTVED 615
P S V I F D
Sbjct: 499 PACSWVEIENAIHMFVAND 517
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 215/444 (48%), Gaps = 10/444 (2%)
Query: 3 ASSLPPRL-NKIYRSSTINQWNSQIRE-AVDKNEAHKALLLFRRMKKNDIE----PNNLT 56
A PPRL +++ S +N + + E + D++ + L R ND+E P +
Sbjct: 2 ALRFPPRLLSQLKLSRRLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRR 61
Query: 57 F-PFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
F + K C + +++H HI++S F DI + T+++MYAKC L+ A K+F+KM
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
P RD +W +I G++Q L F M G + T+ + +AA +
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+H F + G D++V V + + Y + + A+LVF +E R VSWN++I G
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNALIAGHAR 239
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+ +L ++ M+ DGFRP + SL +C L QG+ VH++ I G L
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
NTL+ MY+K G I AR +FD + R VSW ++++ YAQ G EA+ F M G
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ ++ LS+++ C SG L+ G + G+ ++D+ + G + A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 416 LFYALP-EKTVVSWTTMIAGCALN 438
+P E T W ++ C ++
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMH 443
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 6/281 (2%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+LL C + L+QGR+VH+H + F D+ + NTL++MY+KCG ++ AR +F+ M R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
V+WT +ISGY+Q +AL F M G P+ T+ S+I G
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+ G NV V +AL+D+Y++ G + DA+ +F AL + VSW +IAG A
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS-- 500
+AL+LF M+ RP+ ++ ++ AC+ GFLE+G M K + +L ++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE---KLVAFAGN 301
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ D+ + G + +A + K D W +LL A H
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 270/514 (52%), Gaps = 2/514 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + V + A +F M++ + PN++TF + CA + +HG +V
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVV 275
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S D V T++ MYAKC L A +LFD MP D+ +WN MI G+ Q GF+++ C
Sbjct: 276 SSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASC 335
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ M G++ D +T L K +H + I GV DV + + I Y
Sbjct: 336 LFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYF 395
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D++MA +F + +V ++I G +++L +R ++ + R + T+
Sbjct: 396 KCRDVEMAHKIFD--QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C AL G+ +H H + G V + ++ MY+KCG +D A F G+
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISX 513
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V W +MI+ +Q G +EA+ LF M AG D V++ + +S C AL GK
Sbjct: 514 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 573
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G + ++ +ALIDMYSKCG++ A +F + EK VSW ++IA +G
Sbjct: 574 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRL 633
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
++L+LFH M+ ++P+ VTFLA++ AC HAG +++G YF MT+ + + HY+C
Sbjct: 634 KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC 693
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
M DL GR G+L EA + SMP DAG+WG L
Sbjct: 694 MVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYL 727
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 241/524 (45%), Gaps = 4/524 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR + ALL + +M P+ TFP++ KAC L+ +++H I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F D+FV ++++ Y++ + A LFD+MP +D WN M+ G+ + G +
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MR + VT + ++ +H + G++ D V NT ++ YA
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYA 294
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A +F + + +V+WN +I G D++ + MI G +PD T
Sbjct: 295 KCGHLFDARRLFDMMPK--TDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITF 352
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S L L QG+ +H + I G LDV + + LI +Y KC D++ A +FD
Sbjct: 353 SSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTP 412
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V TAMISGY G + AL +F + + VT+ S++ C AL LGK
Sbjct: 413 VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKEL 472
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
+ G + V +A++DMY+KCG + A + F + K V W +MI C+ NG+
Sbjct: 473 HGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKP 532
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA+DLF QM + + V+ A L AC + L G M + +L S
Sbjct: 533 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESA 591
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ D+ + G L A M K++ W +++ A H ++
Sbjct: 592 LIDMYSKCGNLDLACRVFDMMEEKNEVS-WNSIIAAYGNHGRLK 634
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 207/414 (50%), Gaps = 3/414 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + + + WN I V +A LF M ++P+++TF ++ +
Sbjct: 304 RLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGA 363
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
+ IH +I+++ D+F+++ ++D+Y KC ++ A+K+FD+ D+ AMI
Sbjct: 364 TLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMIS 423
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
G+ G L +F + ++A+ VT+ + A L+L K +H + G
Sbjct: 424 GYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGG 483
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
V + + YAKC L +A F GI + V WNS+I C+ K +++++ +R
Sbjct: 484 SCYVGSAIMDMYAKCGKLDLAHQTFIGISX--KDAVCWNSMITSCSQNGKPEEAIDLFRQ 541
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M G + D ++ + LS+C AL G+ +H+ + F D+ + LI MYSKCG+
Sbjct: 542 MGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGN 601
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+D A +FD M ++ VSW ++I+ Y G L ++L LF M G PD VT L++IS
Sbjct: 602 LDLACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISA 661
Query: 369 CGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
CG +G ++ G +F G+ + ++D++ + G + +A + ++P
Sbjct: 662 CGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMP 715
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 217/482 (45%), Gaps = 8/482 (1%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRD 119
I + C S + + H ++ + + + T ++ MY C A +F ++
Sbjct: 52 ILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 120 VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 179
WN MI GF MG + L ++ M G D T + +A ++L + VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+G + DV V ++ I Y++ + A +F + + V WN ++ G +
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPS--KDGVLWNVMLNGYVKNGDW 229
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D++ + M P+ T +LS C + G +H + G ++D V NTL
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTL 289
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
++MY+KCG + AR LFD M V+W MISGY Q G +DEA LF M +AG PD
Sbjct: 290 LAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDS 349
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+T S + + L GK Y G+ +V + +ALID+Y KC + A ++F
Sbjct: 350 ITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQ 409
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+V T MI+G LNG AL++F +++ +R N VT +VL AC L G
Sbjct: 410 RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLG 469
Query: 480 WGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
L + + + Y S + D+ + GKL A + K DA W +++ +
Sbjct: 470 K---ELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXK-DAVCWNSMITS 525
Query: 538 CK 539
C
Sbjct: 526 CS 527
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 280/511 (54%), Gaps = 6/511 (1%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAA 165
AY +F + DV +WN+M+ F + L + M R + F T L +
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRF-TFPSLLKGC 89
Query: 166 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
+ K +H + + +D+ + T ++ YA C DLK A +F + G R V
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM--GHRNKVV 147
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
W S+I G +++L Y+ M DGF PD T+ +L+S+C + L G +HSH
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
+ + + L++MY+KCGD+ +AR +FD + D+ +W+A+I GY + EAL+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 346 LFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
LF + + P+ VT+L++IS C Q G LE G+W +Y +V + N+LIDM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKCG I A+ +F ++ K ++SW +M+ G AL+G EAL F M DL+P+ +TF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFI 387
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
VL AC+HAG +++G F + +Y V + HY CM DLL R G L EA +F++ MP+
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ D IWG++L AC+++ N+E+GE A L +LEP + Y+ ++NIYA W+ V +
Sbjct: 448 QPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKV 507
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R +M ++K PG S V I+ +F D
Sbjct: 508 RELMNEKGIQKTPGCSSVVIDNIAHSFLAGD 538
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 249/506 (49%), Gaps = 39/506 (7%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYS 73
R + WNS +R V+ N +AL + M +++ P+ TFP + K CA L +F
Sbjct: 39 RELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVG 98
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+++HG +VK SD++++TT+++MYA C L A LF++M R+ W +MI G+ +
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKN 158
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L L+ M G D VT+ L A K L + +HS HI + D+ +C
Sbjct: 159 HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS---HIR-EMDMKIC 214
Query: 194 ----NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ ++ YAKC DLK A VF + + + V +W+++I G ++ ++L +R +
Sbjct: 215 AVLGSALVNMYAKCGDLKTARQVFDKLSD--KDVYAWSALIFGYVKNNRSTEALQLFREV 272
Query: 250 I-YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
RP+ T+++++S+C L GR VH + VS+ N+LI M+SKCGD
Sbjct: 273 AGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGD 332
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
ID+A+ +FD M + +SW +M++G+A G EAL F M+ PD +T + +++
Sbjct: 333 IDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTA 392
Query: 369 CGQSGALELGK--WFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKT 424
C +G ++ GK +++ A G LK C ++D+ + G + +ARE +P +
Sbjct: 393 CSHAGLVQEGKKLFYEIEALYGVRLKSEHYGC--MVDLLCRAGLLAEAREFIRVMPLQPD 450
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
W +M+ C + L+L FL L+ G +
Sbjct: 451 GAIWGSMLGACRVYN-------------NLELGEEAARFLLKLEPTND--------GVYI 489
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKG 510
L++ +Y N + +L+ KG
Sbjct: 490 LLSNIYAKRKMWNEVKKVRELMNEKG 515
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 231/398 (58%), Gaps = 6/398 (1%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD---VTTVVSLLSSCVCPEALVQG 277
R VSWN++I GC + ++L+ R M DGF PD ++TV+ + + C + +G
Sbjct: 450 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECA---DIKRG 506
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+VH + I GFD DV V ++LI MY+ C +D + +FD D V W +M++GYAQ
Sbjct: 507 MVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQN 566
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
G ++EAL +F M AG P VT S+I G L LGK Y DN+ +
Sbjct: 567 GSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFIS 626
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
++LIDMY KCG++ AR +F + +VSWT MI G AL+G EA LF +M +++
Sbjct: 627 SSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVK 686
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
PN +TFLAVL AC+HAG ++ GW YFN M+ Y P L H + +AD LGR G L EA +
Sbjct: 687 PNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYN 746
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F+ M IK + +W TLL AC++H+N + E VA ++FELEP S +V ++N+Y+ GR
Sbjct: 747 FISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGR 806
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W+ A LR M+ +KK P S + + K F D
Sbjct: 807 WNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHD 844
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 217/461 (47%), Gaps = 28/461 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNN---LTFPFIAKACAKLSDFLYSQMIHG 78
W QIR A + + A+ LF +M+ + + P + + P K+CA L + +H
Sbjct: 332 WAYQIRMAASQGQFLHAISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLHA 390
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRL----------------DCAY----KLFDKMPDR 118
++S ++D F ++++ K AY K+FD+M +R
Sbjct: 391 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 450
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
D SWN +I+G A+ ++ L + M G D T+ + + VH
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ I G D DV V ++ I YA C + + VF + V WNS++ G
Sbjct: 511 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC--DAVLWNSMLAGYAQNGS 568
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+++L +R M+ G RP T SL+ + L G+ +H++ I F+ ++ + ++
Sbjct: 569 VEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSS 628
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
LI MY KCG++D AR +F+G+ VSWTAMI GYA G EA LF ME P+
Sbjct: 629 LIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPN 688
Query: 359 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+T L++++ C +G ++ G K+F++ + G ++ C AL D + G + +A
Sbjct: 689 HITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFI 748
Query: 418 YALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+ K S W+T++ C ++ V A ++ ++ EL+ +
Sbjct: 749 SEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPK 789
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%)
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+S R +FD M +R VSW +I G A+ EAL + M G +PD T+ +++
Sbjct: 438 ESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 497
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
+ ++ G YA G ++V V ++LIDMY+ C + + ++F + + V W
Sbjct: 498 AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWN 557
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+M+AG A NG EAL +F +M++ +RP VTF +++ A + L G
Sbjct: 558 SMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 607
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 297/582 (51%), Gaps = 72/582 (12%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +VK SD FV T+++DMYAKC +D A +++DKM D A+ N +I +A+ GF
Sbjct: 136 HCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFF 195
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ +F + +G + + T + + K +H+ + + ++ +V N
Sbjct: 196 VQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNAL 255
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY---------- 246
++ Y+KC ++ AE+VF + G R ++SW + I G F +L +
Sbjct: 256 LTLYSKCGMMEEAEIVFENL--GQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEP 313
Query: 247 ----------------------------------------RHMIYDG-----FRPDVTTV 261
R MI +G RP+ +
Sbjct: 314 NEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVL 373
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C G +H+ + F+ D +I+ LI MYSKCG ++ A +FD + +
Sbjct: 374 PSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIPN 433
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
VSW +I+G++Q D G P VT+ S++ C L GK
Sbjct: 434 V--VSWNTLIAGFSQMLD-------------QGFCPSSVTISSLLPACTNVANLRHGKEI 478
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
YA G++ +V V +AL+DMY+KCG I +A+ LFY +PE+ V+W ++I G A +G
Sbjct: 479 HGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYC 538
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EA++LF+QM E D + + +TF AVL AC+HAG +E G F M + Y++ P L HY+C
Sbjct: 539 NEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYAC 598
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR GKL EA D +++MP++ D +WG LL AC+ H NIE+ E A LFELEP S
Sbjct: 599 MVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPES 658
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+ ++N+YA GRW A ++ MMK+ + KFPG S +
Sbjct: 659 PGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 700
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 204/477 (42%), Gaps = 47/477 (9%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A +F ++ PN+ T+ + C +S + +H H+VK + S+ V ++
Sbjct: 197 QAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALL 256
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD-- 154
+Y+KC ++ A +F+ + R++ SW A I GF Q G +K L F MR GI+ +
Sbjct: 257 TLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEF 316
Query: 155 -FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
F V+ + S G H+ + + I K L+ + V
Sbjct: 317 TFSIVLASCGCDLGKWMKQRTSSNRWGGQHL---MSIFLLRKMIEEGNKPTSLRPNQFVL 373
Query: 214 ------------RGIEEGLRTVVSWNS-------------IIGGCTYGDK----FDDSLN 244
R E + TV+ NS + C + +K FD N
Sbjct: 374 PSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIPN 433
Query: 245 F---------YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+ M+ GF P T+ SLL +C L G+ +H + + G + DV V
Sbjct: 434 VVSWNTLIAGFSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYV 493
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
+ L+ MY+KCG I A+ LF M +R V+W ++I GYA G +EA+ LF ME +
Sbjct: 494 RSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT 553
Query: 356 VPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
D +T ++++ C +G +ELG+ F ++ + ++D+ + G + +A
Sbjct: 554 KLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAY 613
Query: 415 ELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR-PNRVTFLAVLQA 469
+L A+P E W ++ C +G A + EL+ P L+ L A
Sbjct: 614 DLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYA 670
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 111/223 (49%)
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
H+ + G P V S LS C + GR H + G D V +LI MY+KCG
Sbjct: 103 HVEFGGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCG 162
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++DSA ++D M + +IS YA+ G +A ++F + G P+ T +M++
Sbjct: 163 EVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLA 222
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
CG A++ GK + V NAL+ +YSKCG + +A +F L ++ ++S
Sbjct: 223 VCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIIS 282
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
WT I G +G+F +AL F M E + PN TF VL +C
Sbjct: 283 WTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC 325
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 308 DIDSARFLFDGMCDRTRVSWT-AMISGYAQKGDLDEALRL--FFA------MEAAGEVPD 358
D+++A LF+ R VS T + SG D +E ++ FF +E G P
Sbjct: 55 DLNNACILFEKTPKRIGVSITESHRSGCTD--DPEEGVKEAGFFTRNETPHVEFGGGFPH 112
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
V S +S CG+ G +ELG+ + + GL + VC +LIDMY+KCG + A ++
Sbjct: 113 RQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYD 172
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ + +I+ A NG FV+A +F Q+ + RPN T+ +L C +++
Sbjct: 173 KMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQE 232
Query: 479 G 479
G
Sbjct: 233 G 233
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA-----KLSDFLYSQMI 76
WNS I + ++A+ LF +M+++D + ++LTF + AC+ +L + L+ +M
Sbjct: 525 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQ 584
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFAQMGF 135
+ ++ + MVD+ + +L AY L MP + D W A++ G
Sbjct: 585 EKYRIE----PRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGN 640
Query: 136 LE 137
+E
Sbjct: 641 IE 642
>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/615 (30%), Positives = 316/615 (51%), Gaps = 12/615 (1%)
Query: 7 PPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAK 66
P +L + + W + I V+ ++ +AL L+ +M + I PN TF +
Sbjct: 171 PHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLG---- 226
Query: 67 LSDFL-----YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVA 121
+ FL Y +++H ++ ++ ++T ++ MYAKC R++ A K+ + P DV
Sbjct: 227 MPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVC 286
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
W ++I GF Q + + + +M L GI + T L A+ L L + HS
Sbjct: 287 LWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRV 346
Query: 182 IHIGVDADVSVCNTWISAYAKCNDLKMAEL-VFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
I +G++ D+ V N + Y KC+ + FRGI L V+SW S+I G +
Sbjct: 347 IMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGI--ALPNVISWTSLIAGFAEHGFEE 404
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+S+ + M G +P+ T+ ++L +C ++++Q + +H + I D+D++V N L+
Sbjct: 405 ESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALV 464
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
Y+ G D A + M R +++T + + Q+GD + ALR+ M D
Sbjct: 465 DAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEF 524
Query: 361 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 420
++ S IS G +E GK Y+ G + V N+L+ YSKCGS+ DA +F +
Sbjct: 525 SLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDI 584
Query: 421 PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
E VSW +I+G A NG +AL F M ++P+ VTFL+++ AC+ L +G
Sbjct: 585 TEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGL 644
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 540
YF M K Y + P+L+HY C+ DLLGR G+L+EA+ +++MP K D+ I+ TLL AC +
Sbjct: 645 DYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNL 704
Query: 541 HRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
H N+ +GE +A R EL+P A Y+ +A++Y G D R +M+ +++ P Q
Sbjct: 705 HGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQC 764
Query: 601 LVHINGKTCTFTVED 615
+ + K F+ +
Sbjct: 765 WMEVKSKIYLFSARE 779
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 196/401 (48%), Gaps = 10/401 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H I+K D+++ ++ +YAKC + A LFD+MP RDV SW ++ +
Sbjct: 38 VHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTRNKH 97
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M G + T+ ++ +H+ + +G++ + + T
Sbjct: 98 HFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTT 157
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y KC+ + +++G VVSW ++I K+ ++L Y MI G
Sbjct: 158 LVDLYTKCDCTVEPHKLLAFVKDG--DVVSWTTMISSLVETSKWSEALQLYVKMIEAGIY 215
Query: 256 PDVTTVVSLLSSCVCPEAL----VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
P+ T V LL P L G+++HS I +G ++++ + +I MY+KC ++
Sbjct: 216 PNEFTFVKLLG---MPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMED 272
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A + WT++ISG+ Q + EA+ ME +G +P+ T S+++
Sbjct: 273 AIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSS 332
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG-SIGDARELFYALPEKTVVSWTT 430
+LELG+ F + GL+ ++ V NAL+DMY KC + + + F + V+SWT+
Sbjct: 333 VLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTS 392
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
+IAG A +G E++ LF +M ++PN T +L AC+
Sbjct: 393 LIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACS 433
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 8/462 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + +AL LF M + PN T ++C+ L +F + IH +V
Sbjct: 85 WTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVV 144
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + + TT+VD+Y KCD +KL + D DV SW MI + + L
Sbjct: 145 KLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQ 204
Query: 142 LFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L+ M GI + FV ++G+ K K +HS I GV+ ++ + I
Sbjct: 205 LYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYG--KVLHSQLITFGVEMNLMLKTAIIC 262
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAKC +M + + + V W SII G + +++N M G P+
Sbjct: 263 MYAKCR--RMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNN 320
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF-LFD 317
T SLL++ +L G HS I G + D+ V N L+ MY KC + F
Sbjct: 321 FTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFR 380
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
G+ +SWT++I+G+A+ G +E+++LF M+AAG P+ T+ +++ C + ++
Sbjct: 381 GIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQ 440
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
K Y + ++ V NAL+D Y+ G +A + + + ++++TT+ A
Sbjct: 441 TKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQ 500
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
G+ AL + M +++ + + + + A G +E G
Sbjct: 501 QGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETG 542
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 146/285 (51%), Gaps = 11/285 (3%)
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
FR V+SL +S + L +G VHS I G D+ + N L+ +Y+KC + AR
Sbjct: 16 FRETCLQVLSLCNS----QTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQAR 71
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M R VSWT ++S + + EAL+LF M +G+ P+ T+ S + C G
Sbjct: 72 HLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALG 131
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
E G GL+ N ++ L+D+Y+KC + +L + + VVSWTTMI+
Sbjct: 132 EFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMIS 191
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG---YFNLMTKVY 490
++ EAL L+ +M+E + PN TF+ +L + G L KG+G + L+T
Sbjct: 192 SLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLG-LGKGYGKVLHSQLITFGV 250
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++N L + + + + ++++A+ Q P K D +W +++
Sbjct: 251 EMNLMLK--TAIICMYAKCRRMEDAIKVSQQTP-KYDVCLWTSII 292
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 289/517 (55%), Gaps = 16/517 (3%)
Query: 111 LFDKMPDR-DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
LF++ D+ DV SWN++I A+ G + L F +MR + + + +A
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ K H G +D+ V + I Y+ C L+ A VF I + R +VSW S+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK--RNIVSWTSM 148
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT------VVSLLSSC--VCPEALVQGRLVH 281
I G D+++ ++ ++ + D T +VS++S+C V + L + +H
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTES--IH 206
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGD--IDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
S I GFD VSV NTL+ Y+K G+ + AR +FD + D+ RVS+ +++S YAQ G
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 340 LDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+EA +F + V + +T+ +++ SGAL +GK + GL+D+V+V
Sbjct: 267 SNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
++IDMY KCG + AR F + K V SWT MIAG ++G +AL+LF M++ +RP
Sbjct: 327 SIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N +TF++VL AC+HAG + GW +FN M + V P L HY CM DLLGR G L++A D
Sbjct: 387 NYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+Q M ++ D+ IW +LL AC+IH+N+E+ E RLFEL+P + Y+ +++IYA GRW
Sbjct: 447 IQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRW 506
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +R MK + K PG SL+ +NG+ F + D
Sbjct: 507 KDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 232/462 (50%), Gaps = 13/462 (2%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+L N+ + + WNS I + ++ +AL F M+K + P +FP KAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
+ L D + H + SDIFV + ++ MY+ C +L+ A K+FD++P R++ SW
Sbjct: 87 SSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVGIQAD---FVTVMGLT---QAAIHAKHLSLLKSVH 178
+MI G+ G + LF ++ + D F+ MG+ A L +S+H
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIH 206
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCND--LKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
SF I G D VSV NT + AYAK + + +A +F I + R VS+NSI+
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVYAQS 264
Query: 237 DKFDDSLNFYRHMIYDGFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+++ + +R +I + + T+ ++L + AL G+ +H I G + DV V
Sbjct: 265 GMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
++I MY KCG +++AR FD M ++ SWTAMI+GY G +AL LF AM +G
Sbjct: 325 GTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 356 VPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
P+ +T +S+++ C +G ++G WF+ G++ + ++D+ + G + A
Sbjct: 385 RPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 415 ELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+L + E + W++++A C ++ A ++ ELD
Sbjct: 445 DLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 292/558 (52%), Gaps = 30/558 (5%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM- 146
++F + ++ A + +LF MP+RD S+NA+I GF+ G + + L+ +
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 147 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
R ++ +T+ + A +L SVH + +G A V + + YAK +
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 207 KMAELVFRGIE-----------------------EGL------RTVVSWNSIIGGCTYGD 237
+ A VF+ +E +GL R ++W +++ G T
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
++L+ +R M +G D T S+L++C AL +G+ +H++ ++ +V V +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MYSKC I A +F M R +SWTAMI GY Q +EA+R F M+ G P
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T+ S+IS C +LE G F A GL + V NAL+ +Y KCGSI DA LF
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ VSWT ++ G A G+ E +DLF +M+ L+P+ VTF+ VL AC+ AG +E
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVE 497
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
KG YF+ M K + + P +HY+CM DL R G+ KEA +F++ MP DA W TLL +
Sbjct: 498 KGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
C++ N+EIG++ A L E +P + A YV + +++A G+W VA+LR M+ QVKK P
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 598 GQSLVHINGKTCTFTVED 615
G S + K F+ +D
Sbjct: 618 GCSWIKYKNKVHIFSADD 635
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 223/478 (46%), Gaps = 43/478 (8%)
Query: 1 MAASSLPPRLNKIYRSSTIN---QWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLT 56
+A S L P + +++ S +N+ I +++ L+R + ++ + P +T
Sbjct: 89 LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK--------------- 101
+ + LSD +H +++ F + FV + +VDMYAK
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208
Query: 102 ----------------CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN 145
C ++ A LF M DRD +W M+ G Q G + L +F
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
MR G+ D T + A L K +H++ + +V V + + Y+KC
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS 328
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+++AE VFR + R ++SW ++I G ++++ + M DG +PD T+ S++
Sbjct: 329 IRLAEAVFRRMT--CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVI 386
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
SSC +L +G H + G ++V N L+++Y KCG I+ A LFD M +V
Sbjct: 387 SSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 446
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNY 384
SWTA+++GYAQ G E + LF M A G PD VT + ++S C ++G +E G +FD+
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSM 506
Query: 385 ACSGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNG 439
G+ D+ C +ID+YS+ G +A E +P W T+++ C L G
Sbjct: 507 QKDHGIVPIDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 45/364 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + +AL +FRRM+ + + TF I AC L+ + IH +I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 305
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + ++FV + +VDMY+KC + A +F +M R++ SW AMIVG+ Q E+ +
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M++ GI+ D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F E VSW +++ G K ++++ + M+ +G +PD T
Sbjct: 426 KCGSIEDAHRLFD--EMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTF 483
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +LS+C S+ G ++ FD M
Sbjct: 484 IGVLSAC-----------------------------------SRAGLVEKGCDYFDSMQK 508
Query: 322 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ +T MI Y++ G EA M + PD +++S C G +E
Sbjct: 509 DHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNME 565
Query: 377 LGKW 380
+GKW
Sbjct: 566 IGKW 569
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 196/610 (32%), Positives = 299/610 (49%), Gaps = 24/610 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+I W I V + + A+ LF R+ + I + + F + AC+ ++IH
Sbjct: 92 SIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIH 151
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFL 136
V++ V + +V MY +C L A LF + DV WNAMI +Q G
Sbjct: 152 RCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSP 211
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCN 194
+ L +FY M +GI D VT + + +A + L S +K H+ G+ +DV V
Sbjct: 212 REALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVAT 271
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDG 253
++AYA+C ++ A F + E R VSW S+I G ++ + M+ +G
Sbjct: 272 ALVNAYARCGEIDCAREFFAAMPE--RNAVSWTSMIAAFAQIGHLL--AVETFHAMLLEG 327
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
P +T+ + L C E L RLV + G DV+++ L+ Y++C + A
Sbjct: 328 VVPTRSTLFAALEGC---EDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAI 384
Query: 314 FLFDGMCDRTRVSW-----TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+F R W TAMI+ YAQ D +L+ A G PD + ++ +
Sbjct: 385 RVFSA---REEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDA 441
Query: 369 CGQSGALELGKWFDNYACSGG---LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
C AL G+ +AC L +V + NA++ MY +CGS+ DAR+ F +P +
Sbjct: 442 CASLAALSEGRQI--HACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDE 499
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
+SW M++ A +G + DLF M++ RV FL +L AC HAG +E G +F+
Sbjct: 500 ISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSA 559
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
MT + V P HY CM DLLGRKG+L +A VQ+MP+ DA W L+ AC+I+ + E
Sbjct: 560 MTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTE 619
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
G + A R+ EL + A YV + NIY+ GRW+ A +R +M ++K PG S + I
Sbjct: 620 RGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIR 679
Query: 606 GKTCTFTVED 615
K F V D
Sbjct: 680 SKVHEFVVRD 689
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 210/465 (45%), Gaps = 16/465 (3%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D ++ +++V MY +C L+ A +F K+ + + W +I + G + LF+ +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
GI D + + + A + L+ + +H + G+ V + +S Y +C L+
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A +F +E L VV WN++I + ++L + M+ G PD+ T VS+ +
Sbjct: 181 DANALFGHLERHL-DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239
Query: 268 CVCPEALVQGRLVHSHGIH-----YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
C +L R G H G DV V L++ Y++CG+ID AR F M +R
Sbjct: 240 CSSSPSL---RASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPER 296
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
VSWT+MI+ +AQ G L A+ F AM G VP T+ + + GC L + +
Sbjct: 297 NAVSWTSMIAAFAQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCED---LHTARLVE 352
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT--VVSWTTMIAGCALNGE 440
A G+ +V + L+ Y++C DA +F A E T MIA A +
Sbjct: 353 AIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRD 412
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
L+ +E + P+R+ ++ L AC L +G + +++ ++ +
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ + G+ G L++A D MP + + W +L A H +E
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 150/303 (49%), Gaps = 14/303 (4%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFL 315
D V L+ C ++ +G+L+HS D + ++L+ MY +CG ++SA +
Sbjct: 28 DSAAAVRLVREC---NSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDV 84
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + ++ V WT +IS Y +G A+ LF + G D + +S++S C L
Sbjct: 85 FHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFL 144
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAG 434
G+ A GL +V +AL+ MY +CGS+ DA LF L VV W MI
Sbjct: 145 AAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITA 204
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW--GYFNLMTKVYQV 492
+ NG EAL++F++M++L + P+ VTF++V +AC+ + L G+ + + +
Sbjct: 205 NSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDET-GL 263
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
++ + + + R G++ A +F +MP + +A W +++ A +IG +A
Sbjct: 264 GSDVVVATALVNAYARCGEIDCAREFFAAMP-ERNAVSWTSMIAAFA-----QIGHLLAV 317
Query: 553 RLF 555
F
Sbjct: 318 ETF 320
>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
Length = 810
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 318/591 (53%), Gaps = 27/591 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V +E A+LL R M +N + N T I ACA++S + IHG +
Sbjct: 238 SWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMV 297
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK---MPDRDVASWNAMIVGFAQMGFLE 137
+K+ + D V+ ++ Y ++ + K+F++ + +R + W+A I G + L
Sbjct: 298 LKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLR 355
Query: 138 KVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
V L M G++ + + +V + L HS I G + V +
Sbjct: 356 SVQ-LLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQL------HSSAIKEGFIHGILVGS 408
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDG 253
+ Y++C++++ + VF ++E R VSW +++ G T+G + L F R+MI DG
Sbjct: 409 ALSTMYSRCDNVQDSYKVFEEMQE--RDGVSWTAMVAGFATHGHSVEAFLTF-RNMILDG 465
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINT-LISMYSKCGDIDS 311
F+PD ++ ++LS+C E L++G+ VH H + YG + + IN ISMYSKC + +
Sbjct: 466 FKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYG---ETTFINDCFISMYSKCQGVQT 522
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR +FD + +V W++MISGYA G +EA+ LF M AA D S++S C
Sbjct: 523 ARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 582
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
K YA G+ + V ++L+ +YS+ G++ D+R++F + +V+WTT+
Sbjct: 583 IARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTI 642
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G A +G AL +F M++L +RP+ V ++VL AC+ G +E+G+ YFN M Y
Sbjct: 643 IDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYG 702
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V PEL HY CM DLLGR G+L EA FV SMP+K D +W TL+ AC++H + +G +V
Sbjct: 703 VEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDTVLGRFVE 762
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
++ E + + + ++NI A G W+ VA +R MK V K PG S+V
Sbjct: 763 NKIREGN-YDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/561 (27%), Positives = 249/561 (44%), Gaps = 43/561 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + AV E A+ +FR M EPN+ T+ ACA + + +HG ++
Sbjct: 138 WNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVL 197
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D+FV T++V+MYAKC + A + F +MP R+V SW I GF Q +
Sbjct: 198 RRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAML 257
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G+ + T + A + +H + + D V IS Y
Sbjct: 258 LLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYT 317
Query: 202 KCNDLKMAELVFRGIEEGLRTVVS-WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++++E VF E G + S W++ I G + S+ R M + G RP+
Sbjct: 318 NFGFIELSEKVFE--EAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKC 374
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+ SS ++ G +HS I GF + V + L +MYS+C ++ + +F+ M
Sbjct: 375 YASVFSSV---NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQ 431
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R VSWTAM++G+A G EA F M G PD V++ +++S C +S L GK
Sbjct: 432 ERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKE 491
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + + + I MYSKC + AR +F A P K V W++MI+G A NG
Sbjct: 492 VHGHTLR-VYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGC 550
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACT----------------HAGFLEKGWGYFN 484
EA+ LF M+ +R + ++L C AG L +
Sbjct: 551 GEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSD-QSVSS 609
Query: 485 LMTKVYQVN---------------PELNHYSCMADLLGRKGKLKEAL---DFVQSMPIKS 526
+ KVY + P+L ++ + D + G + AL D + + ++
Sbjct: 610 SLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRP 669
Query: 527 DAGIWGTLLCACKIHRNIEIG 547
D + ++L AC + +E G
Sbjct: 670 DTVVLVSVLSACSRNGLVEQG 690
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 202/449 (44%), Gaps = 10/449 (2%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
+ +V T MVD+ AK RL A ++F WNA + G + G + +F +M
Sbjct: 103 NAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV 162
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+ + T G A + LS+ ++VH + + DV V + ++ YAKC D+
Sbjct: 163 WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMG 222
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F + +R VVSW + I G D+ ++ R M+ +G + T S+L +
Sbjct: 223 AAMREFWRMP--VRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLA 280
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVS 326
C + + +H + LD V LIS Y+ G I+ + +F+ R
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI 340
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W+A ISG + L +++L M G P+ S+ S ++E G + A
Sbjct: 341 WSAFISGVSNH-SLLRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIEFGGQLHSSAI 396
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
G ++V +AL MYS+C ++ D+ ++F + E+ VSWT M+AG A +G VEA
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
F M+ +P+ V+ A+L AC + L KG +VY +N C +
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTFIN--DCFISMY 514
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ ++ A + P K D +W +++
Sbjct: 515 SKCQGVQTARRIFDATPCK-DQVMWSSMI 542
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 10/295 (3%)
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G+ + VC + AK L+ A VF + + V WN+ + G + ++
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPS--SAVCWNAAVSGAVRNGEGGLAVE 156
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+R M++ P+ T LS+C E L GR VH + + DV V +L++MY+
Sbjct: 157 MFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYA 216
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCGD+ +A F M R VSWT I+G+ Q + A+ L M G + T S
Sbjct: 217 KCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATS 276
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++ C Q + + + +V ALI Y+ G I + ++F E
Sbjct: 277 ILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAG 333
Query: 425 VVS----WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
VS W+ I+G + N + ++ L +M LRPN + +V + F
Sbjct: 334 TVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEF 387
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%)
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G + V ++ + +K G + A +F + V W A +SG + G+ A+ +F
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M P+ T +S C L +G+ + +V V +L++MY+KC
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC 218
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G +G A F+ +P + VVSWTT IAG + E V A+ L +M+ + N+ T ++L
Sbjct: 219 GDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSIL 278
Query: 468 QACTHAGFLEK 478
AC + +
Sbjct: 279 LACAQMSMVRE 289
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL N VC ++D+ +K G + DA +F + V W ++G NGE A+++F
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLL 506
M+ PN T+ L AC L G L V + +PE + + + + ++
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGL---VLRRDPEYDVFVGTSLVNMY 215
Query: 507 GRKGKLKEALDFVQSMPIKS 526
+ G + A+ MP+++
Sbjct: 216 AKCGDMGAAMREFWRMPVRN 235
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 254/449 (56%), Gaps = 6/449 (1%)
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+HLS + H+ I +++ ++ I+ Y+ +D A VF GI R VVSWN+
Sbjct: 144 RHLSPV--AHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPS--RDVVSWNA 199
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++ + R M+ DG P+ T+ +L++C LV GR V
Sbjct: 200 MMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSA 259
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G + D V + L+ MY KCG+I AR +FD + D+ V+W AMI+GYAQ G +EA+ LF
Sbjct: 260 GMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLF 319
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M+ AG PD +T+ ++S C GALELG D YA GL +NV V AL+DMY+KC
Sbjct: 320 HNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKC 379
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAV 466
G + A E+F + K V SW +I G A NG+ EA+ F M D L+P+ +TF+ V
Sbjct: 380 GDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGV 439
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
L AC HAG ++ G +FN +T +Q+ P++ HYSCM D L R G L+E DF++ +P K
Sbjct: 440 LSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKV 499
Query: 527 DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRT 586
DA + G LL AC+ +N+EIGE V R+ +LEP ++ YV + IYA GR D A +R
Sbjct: 500 DAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRG 559
Query: 587 MMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+M+ V K PG S V I+GK F D
Sbjct: 560 LMRERGVNKTPGCSWVEISGKVLEFYAGD 588
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 177/367 (48%), Gaps = 6/367 (1%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
S + H + K S +++ +Y+ D A K+F+ +P RDV SWNAM+ + +
Sbjct: 147 SPVAHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGR 206
Query: 133 MGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
+G +V + +M G + + VT+ + A L L + V + G++ D
Sbjct: 207 VGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSL 266
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V + + Y KC ++ A VF I + + VV+WN++I G +++++ + +M
Sbjct: 267 VGSALVGMYEKCGEIAEARRVFDSIID--KDVVAWNAMITGYAQNGMSNEAISLFHNMKK 324
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G PD T+ +LS+C AL G + + G +V V L+ MY+KCGD+D
Sbjct: 325 AGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDK 384
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA-GEVPDLVTVLSMISGCG 370
A +F M + SW A+I G A G DEA++ F M G PD +T + ++S C
Sbjct: 385 AIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACV 444
Query: 371 QSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSW 428
+G ++ GK WF++ + + + ++D ++ G + + + +P+K V
Sbjct: 445 HAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAVML 504
Query: 429 TTMIAGC 435
++A C
Sbjct: 505 GALLAAC 511
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQ 74
S + WN+ ++ + + R M K+ + PN +T + AC D + +
Sbjct: 191 SRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGR 250
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ + +D V + +V MY KC + A ++FD + D+DV +WNAMI G+AQ G
Sbjct: 251 WVEEWSKSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNG 310
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + LF+NM+ G+ D +T+ G+ A L L + + G+ +V V
Sbjct: 311 MSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGT 370
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-YDG 253
+ YAKC DL A VFR + + V SWN++I G + + D+++ + M DG
Sbjct: 371 ALVDMYAKCGDLDKAIEVFRKMR--CKNVASWNALICGLAFNGQGDEAIQHFELMRNEDG 428
Query: 254 FRPDVTTVVSLLSSCV 269
+PD T + +LS+CV
Sbjct: 429 LKPDDITFIGVLSACV 444
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I +++A+ LF MKK + P+ +T + AC+ + + G+
Sbjct: 299 WNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYAS 358
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+++++V T +VDMYAKC LD A ++F KM ++VASWNA+I G A G ++ +
Sbjct: 359 CRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQ 418
Query: 142 LFYNMRLV-GIQADFVTVMGLTQAAIHA-----------------------KHLSL---- 173
F MR G++ D +T +G+ A +HA +H S
Sbjct: 419 HFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDP 478
Query: 174 ------LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
L+ V F I D + ++A KC ++++ E V I + L SWN
Sbjct: 479 LARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQ-LEPTNSWN 537
Query: 228 SIIGGCTYGD--KFDDS 242
++ Y + DDS
Sbjct: 538 YVVSSKIYASSGRLDDS 554
>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 810
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 318/591 (53%), Gaps = 27/591 (4%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V +E A+LL R M +N + N T I ACA++S + IHG +
Sbjct: 238 SWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMV 297
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK---MPDRDVASWNAMIVGFAQMGFLE 137
+K+ + D V+ ++ Y ++ + K+F++ + +R + W+A I G + L
Sbjct: 298 LKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLR 355
Query: 138 KVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
V L M G++ + + +V + L HS I G + V +
Sbjct: 356 SVQ-LLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQL------HSSAIKEGFIHGILVGS 408
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDG 253
+ Y++C++++ + VF ++E R VSW +++ G T+G + L F R+MI DG
Sbjct: 409 ALSTMYSRCDNVQDSYKVFEEMQE--RDGVSWTAMVAGFATHGHSVEAFLTF-RNMILDG 465
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINT-LISMYSKCGDIDS 311
F+PD ++ ++LS+C E L++G+ VH H + YG + + IN ISMYSKC + +
Sbjct: 466 FKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYG---ETTFINDCFISMYSKCQGVQT 522
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR +FD + +V W++MISGYA G +EA+ LF M AA D S++S C
Sbjct: 523 ARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 582
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
K YA G+ + V ++L+ +YS+ G++ D+R++F + +V+WTT+
Sbjct: 583 IARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTI 642
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G A +G AL +F M++L +RP+ V ++VL AC+ G +E+G+ YFN M Y
Sbjct: 643 IDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYG 702
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
V PEL HY CM DLLGR G+L EA FV SMP+K D +W TL+ AC++H + +G +V
Sbjct: 703 VEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDTVLGRFVE 762
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
++ E + + + ++NI A G W+ VA +R MK V K PG S+V
Sbjct: 763 NKIREGN-YDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/561 (27%), Positives = 249/561 (44%), Gaps = 43/561 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + AV E A+ +FR M EPN+ T+ ACA + + +HG ++
Sbjct: 138 WNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVL 197
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D+FV T++V+MYAKC + A + F +MP R+V SW I GF Q +
Sbjct: 198 RRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAML 257
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G+ + T + A + +H + + D V IS Y
Sbjct: 258 LLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYT 317
Query: 202 KCNDLKMAELVFRGIEEGLRTVVS-WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
++++E VF E G + S W++ I G + S+ R M + G RP+
Sbjct: 318 NFGFIELSEKVFE--EAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKC 374
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
S+ SS ++ G +HS I GF + V + L +MYS+C ++ + +F+ M
Sbjct: 375 YASVFSSV---NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQ 431
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+R VSWTAM++G+A G EA F M G PD V++ +++S C +S L GK
Sbjct: 432 ERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKE 491
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ + + + I MYSKC + AR +F A P K V W++MI+G A NG
Sbjct: 492 VHGHTLR-VYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGC 550
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACT----------------HAGFLEKGWGYFN 484
EA+ LF M+ +R + ++L C AG L +
Sbjct: 551 GEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSD-QSVSS 609
Query: 485 LMTKVYQVN---------------PELNHYSCMADLLGRKGKLKEAL---DFVQSMPIKS 526
+ KVY + P+L ++ + D + G + AL D + + ++
Sbjct: 610 SLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRP 669
Query: 527 DAGIWGTLLCACKIHRNIEIG 547
D + ++L AC + +E G
Sbjct: 670 DTVVLVSVLSACSRNGLVEQG 690
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 202/449 (44%), Gaps = 10/449 (2%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
+ +V T MVD+ AK RL A ++F WNA + G + G + +F +M
Sbjct: 103 NAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV 162
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+ + T G A + LS+ ++VH + + DV V + ++ YAKC D+
Sbjct: 163 WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMG 222
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F + +R VVSW + I G D+ ++ R M+ +G + T S+L +
Sbjct: 223 AAMREFWRMP--VRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLA 280
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVS 326
C + + +H + LD V LIS Y+ G I+ + +F+ R
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI 340
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W+A ISG + L +++L M G P+ S+ S ++E G + A
Sbjct: 341 WSAFISGVSNH-SLLRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIEFGGQLHSSAI 396
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
G ++V +AL MYS+C ++ D+ ++F + E+ VSWT M+AG A +G VEA
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
F M+ +P+ V+ A+L AC + L KG +VY +N C +
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTFIN--DCFISMY 514
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ ++ A + P K D +W +++
Sbjct: 515 SKCQGVQTARRIFDATPCK-DQVMWSSMI 542
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 10/295 (3%)
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
G+ + VC + AK L+ A VF + + V WN+ + G + ++
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPS--SAVCWNAAVSGAVRNGEGGLAVE 156
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
+R M++ P+ T LS+C E L GR VH + + DV V +L++MY+
Sbjct: 157 MFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYA 216
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCGD+ +A F M R VSWT I+G+ Q + A+ L M G + T S
Sbjct: 217 KCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATS 276
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++ C Q + + + +V ALI Y+ G I + ++F E
Sbjct: 277 ILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAG 333
Query: 425 VVS----WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
VS W+ I+G + N + ++ L +M LRPN + +V + F
Sbjct: 334 TVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEF 387
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%)
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G + V ++ + +K G + A +F + V W A +SG + G+ A+ +F
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M P+ T +S C L +G+ + +V V +L++MY+KC
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC 218
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G +G A F+ +P + VVSWTT IAG + E V A+ L +M+ + N+ T ++L
Sbjct: 219 GDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSIL 278
Query: 468 QACTHAGFLEK 478
AC + +
Sbjct: 279 LACAQMSMVRE 289
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
GL N VC ++D+ +K G + DA +F + V W ++G NGE A+++F
Sbjct: 99 GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLL 506
M+ PN T+ L AC L G L V + +PE + + + + ++
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGL---VLRRDPEYDVFVGTSLVNMY 215
Query: 507 GRKGKLKEALDFVQSMPIKS 526
+ G + A+ MP+++
Sbjct: 216 AKCGDMGAAMREFWRMPVRN 235
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 301/596 (50%), Gaps = 11/596 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + AL +F M ++ + PN+ ACA L + +H V
Sbjct: 82 WTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAV 141
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F D ++ + +++MY++C L A ++FD+M DV + ++I F + G E
Sbjct: 142 RAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE 201
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDADVSVCNT-WISA 199
M G++ + T+ + A L + +H + I IG+ + +T I
Sbjct: 202 ALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDF 257
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y++ + K+A+ VF + + VVSW S++ + +++L + MI +G P+
Sbjct: 258 YSRNGEFKLAKAVFDSLH--CKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEF 315
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ +L +C ++ GR +H I + D+ V N L+SMY + G ++ + + +
Sbjct: 316 ALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI 372
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ VSWT IS Q G ++A+ L M + G P+ S++S C +L+ G
Sbjct: 373 ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM 432
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
F A G + NALI+MYSKCG +G AR F + V SW ++I G A +G
Sbjct: 433 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 492
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ +AL++F +M ++P+ TFL VL C H+G +E+G +F LM Y P +HY
Sbjct: 493 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHY 552
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM D+LGR G+ EAL + MP + DA IW TLL +CK+HRN++IG+ A RL EL
Sbjct: 553 ACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 612
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A YV M+NIYA+ G W+ +R M VKK G S + IN + TF D
Sbjct: 613 RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRD 668
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 206/457 (45%), Gaps = 27/457 (5%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D+ ++ ++ K RL A LFD+MP ++V +W +++ G+ + G E L +F +M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G+ + A L + VHS + G D + + I Y++C L
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A+ VF ++ VV + S+I +F+ + M+ G +P+ T+ ++L++
Sbjct: 167 AAKEVFDRMDSP--DVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTA 224
Query: 268 CVCPEAL---VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
CP L + G L+ G+ V LI YS+ G+ A+ +FD + +
Sbjct: 225 --CPRVLGQQIHGYLIKKIGLR---SQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
VSW +M+ Y + G L+EAL++F M + G P+ + ++ CG G LG+
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCS 336
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
A L ++ V NAL+ MY + G + + + + +VSWTT I+ NG +A
Sbjct: 337 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 396
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNH 498
+ L QM PN F +VL +C L++G + L K + N +N
Sbjct: 397 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINM 456
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
YS G+ G + A D + + + S W +L+
Sbjct: 457 YS----KCGQMGSARLAFDVMHTHDVTS----WNSLI 485
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 149/322 (46%), Gaps = 17/322 (5%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ VV+W S++ G T + + +L + M+ G P+ + L +C AL G V
Sbjct: 77 KNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQV 136
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
HS + GF D + + LI MYS+CG + +A+ +FD M V +T++IS + + G+
Sbjct: 137 HSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEF 196
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG-GLK-DNVMVCN 398
+ A M G P+ T+ ++++ C + LG+ Y GL+ +V
Sbjct: 197 ELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSST 252
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
ALID YS+ G A+ +F +L K VVSW +M+ +G EAL +F M+ + P
Sbjct: 253 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 312
Query: 459 NRVTFLAVLQACTHAGF---LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
N VL AC G L +L+T + N L+ Y GR G L E
Sbjct: 313 NEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMY-------GRTG-LVEE 364
Query: 516 LDFVQSMPIKSDAGIWGTLLCA 537
L+ + + D W T + A
Sbjct: 365 LEAMLNKIENPDLVSWTTAISA 386
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC-----AKL 67
+ + + WNS I +A+KAL +F +M+ N I+P++ TF + C +
Sbjct: 472 VMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEE 531
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP-DRDVASWNAM 126
+ + MI + F M+DM + R D A ++ + MP + D W +
Sbjct: 532 GELFFRLMIDQY----SFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 587
Query: 127 I 127
+
Sbjct: 588 L 588
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 257/454 (56%), Gaps = 3/454 (0%)
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ + QA + +SL ++VH G+ V + CNT + YAKC L A LVF +
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+RTVV+W S+I D+++ + M +G PD+ T+ ++L +C C +L G
Sbjct: 61 --VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 278 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+ VH++ ++ V N L+ MY+KCG ++ A +F M + +SW MI GY++
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 397
+EAL LF M + PD T+ ++ C +L+ GK + G + V
Sbjct: 179 SLPNEALSLFGDMVLEMK-PDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NAL+DMY KCG AR LF +P K +++WT MIAG ++G A+ F++M + +
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
P+ V+F+++L AC+H+G L++GW +FN+M V P+L HY+C+ DLL R GKL A
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357
Query: 518 FVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGR 577
F++SMPI+ DA IWG LL C+IH ++++ E VA +FELEP + YV +AN YA +
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
W+ V LR + R +KK PG S + + K F
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIF 451
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 222/454 (48%), Gaps = 28/454 (6%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
I +ACA D + +HG VK+ W F T ++DMYAKC LD A +FD M R
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNT-LLDMYAKCGVLDGAILVFDLMSVR 62
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
V +W ++I +A+ G ++ + LF+ M G+ D T+ + A L K VH
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
++ + +++ VCN + YAKC ++ A VF +E ++ ++SWN++IGG +
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVF--LEMPVKDIISWNTMIGGYSKNSL 180
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+++L+ + M+ + +PD TT+ +L +C +L +G+ VH H + GF D V N
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+ MY KCG AR LFD + + ++WT MI+GY G + A+ F M AG PD
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299
Query: 359 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
V+ +S++ C SG L+ G ++F+ +K + ++D+ ++ G + A +
Sbjct: 300 EVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFI 359
Query: 418 YALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
++P E W +++GC ++ + A + + EL+
Sbjct: 360 KSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELE--------------------- 398
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
+ GY+ L+ Y + + +GR+G
Sbjct: 399 PENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRG 432
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 3/251 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W S I + + +A+ LF M + + P+ T + ACA + +H
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I ++ S+IFV ++DMYAKC ++ A +F +MP +D+ SWN MI G+++
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF +M ++ ++ D T+ + A L K VH + G +D V N +
Sbjct: 183 EALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC +A L+F I + +++W +I G ++++ + M G PD
Sbjct: 242 DMYVKCGVPVLARLLFDMIPT--KDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299
Query: 258 VTTVVSLLSSC 268
+ +S+L +C
Sbjct: 300 EVSFISILYAC 310
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I + ++AL LF M +++P+ T I ACA L+ + +HG
Sbjct: 165 IISWNTMIGGYSKNSLPNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHG 223
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
HI+++ F+SD V +VDMY KC A LFD +P +D+ +W MI G+ GF
Sbjct: 224 HILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNN 283
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ F MR GI+ D V+ + + A H+
Sbjct: 284 AITTFNEMRQAGIEPDEVSFISILYACSHS 313
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 290/553 (52%), Gaps = 16/553 (2%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H H++K F + +Q ++ +Y KC + A KLF+++P R+V SWN MI A +
Sbjct: 80 KQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIR--ASV 137
Query: 134 GFLEK------VLCL--FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
G ++ LC F M L + D +T GL + + +H F + +G
Sbjct: 138 GRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVG 197
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D D V + YAKC ++ A VF + R +V WN ++ + +++
Sbjct: 198 FDLDCFVGCALVGLYAKCGFVENARRVFCDV--SCRDLVMWNVMVSCYVFNSLPEEAFRV 255
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ---GRLVHSHGIHYGFDLDVSVINTLISM 302
+ M D D T SLLS + +AL G+ VHS + FD DV V + LI+M
Sbjct: 256 FNSMRLDVVNGDEFTFSSLLS-VISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINM 314
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+K +I AR +FD M R V+W MI G+ GD +E ++L M G +PD +T+
Sbjct: 315 YAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTI 374
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
S+IS CG + A+ +A +D + V N+LI YSKCGSI A + F +
Sbjct: 375 SSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQ 434
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+V+WT++I A +G ++ ++F +M+ ++P+R+ FL VL AC H G + KG Y
Sbjct: 435 PDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHY 494
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
F LMT YQ+ P+ HY+C+ DLLGR G + EA + ++SMPI+ D+ G + +CK+H
Sbjct: 495 FKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHS 554
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+E+ + A +LF +EP + Y M+NI+A W V +R M+ + K PG S +
Sbjct: 555 NMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWI 614
Query: 603 HINGKTCTFTVED 615
I + +F D
Sbjct: 615 EIGNQIHSFVSND 627
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 206/429 (48%), Gaps = 14/429 (3%)
Query: 22 WNSQIREAVDKNEAHKA------LLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
WN IR +V +N+ +++ FRRM + P+++TF + C + +D
Sbjct: 129 WNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQ 188
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H VK F D FV +V +YAKC ++ A ++F + RD+ WN M+ +
Sbjct: 189 LHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSL 248
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH--AKHLSLLKSVHSFGIHIGVDADVSVC 193
E+ +F +MRL + D T L ++ K VHS + D+DV V
Sbjct: 249 PEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVA 308
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS-IIGGCTYGDKFDDSLNFYRHMIYD 252
+ I+ YAK ++ A VF E +R VV+WN+ I+G +GD ++ + + M+ +
Sbjct: 309 SALINMYAKSENIIDARRVFD--EMSIRNVVAWNTMIVGFGNHGDG-NEVMKLVKEMLRE 365
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
GF PD T+ S++SSC A+ + VH+ + +SV N+LIS YSKCG I SA
Sbjct: 366 GFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSA 425
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
F+ V+WT++I YA G +++ +F M + G PD + L ++S C
Sbjct: 426 FKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHC 485
Query: 373 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTT 430
G + G +F + + + L+D+ + G I +A E+ ++P E +
Sbjct: 486 GLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGA 545
Query: 431 MIAGCALNG 439
I C L+
Sbjct: 546 FIGSCKLHS 554
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 299/579 (51%), Gaps = 4/579 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR +V+ ++L + M+ + I NN TFP + KACA L+ M+H H++
Sbjct: 21 WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F SD+FVQT++VDMY+K L + ++FD+ R V SWN+MI +++ + + L
Sbjct: 81 HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS--VHSFGIHIGVDADVSVCNTWISA 199
LF M G + + T + L H SL + +H + D V N+ +
Sbjct: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQM 200
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y + A VF I E +TV+SW ++GG + M + D
Sbjct: 201 YVNFGQIDSACSVFYAISE--KTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKF 258
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
V ++SSC+ L G +HS + G + + LISMYSKCGD+ SAR +FD +
Sbjct: 259 VFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLL 318
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+++ SWT+MISGYA G EAL LF P+ + + IS C G+L + +
Sbjct: 319 SEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRR 378
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
+ + GL + V +LI +Y K GSI A ++F ++ + + +W++M+ G A++G
Sbjct: 379 EIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHG 438
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ ++LFH+M ++P+ + ++L AC+H+G +E G +F M Y + P + HY
Sbjct: 439 MGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHY 498
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+C+ D+L R G L+ AL+ +Q MP + + W L AC+ + ++E+GE L P
Sbjct: 499 TCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNP 558
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
+ +V MAN+Y G+W A +R+++ + K PG
Sbjct: 559 RNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPG 597
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 195/422 (46%), Gaps = 6/422 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS--DFLYSQM 75
++ WNS I ++AL LFR M EPN+ TF + A + ++
Sbjct: 118 SVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRL 177
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+HG + K D V+ ++V MY ++D A +F + ++ V SW M+ G+ + G
Sbjct: 178 LHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA 237
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ KV F MR + D + + + I +L L S+HS + G+ + +
Sbjct: 238 VAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCL 297
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
IS Y+KC DL A VF + E +++ SW S+I G ++L+ + + R
Sbjct: 298 LISMYSKCGDLLSARAVFDLLSE--KSIYSWTSMISGYANAGYPREALSLFSMATQNNVR 355
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ + + +S+C +L R + + G D V +LI +Y K G I+ A +
Sbjct: 356 PNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKV 415
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F+ M R +W++M++GYA G ++ + LF M+ +G PD S++ C SG +
Sbjct: 416 FNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLV 475
Query: 376 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIA 433
E G + F N G+ ++ L+D+ S+ G + A +P + +W ++
Sbjct: 476 EDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLS 535
Query: 434 GC 435
C
Sbjct: 536 AC 537
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/439 (38%), Positives = 249/439 (56%), Gaps = 3/439 (0%)
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH+ + D+ + NT ++ YAKC L+ A VF + + R V+W ++I G +
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ--RDFVTWTTLISGYSQH 139
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
D+ D+L F+ M+ G+ P+ T+ S++ + G +H + GFD +V V
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+ L+ +Y++ G +D A+ +FD + R VSW A+I+G+A++ ++AL LF M G
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P + S+ C +G LE GKW Y G K N L+DMY+K GSI DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F L ++ VVSW +++ A +G EA+ F +M + +RPN ++FL+VL AC+H+G L
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
++GW Y+ LM K V PE HY + DLLGR G L AL F++ MPI+ A IW LL
Sbjct: 380 DEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
AC++H+N E+G Y A +FEL+P P+V + NIYA GGRW+ A +R MK + VKK
Sbjct: 439 ACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKE 498
Query: 597 PGQSLVHINGKTCTFTVED 615
P S V I F D
Sbjct: 499 PACSWVEIENAIHMFVAND 517
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 215/444 (48%), Gaps = 10/444 (2%)
Query: 3 ASSLPPRL-NKIYRSSTINQWNSQIRE-AVDKNEAHKALLLFRRMKKNDIE----PNNLT 56
A PPRL +++ S +N + + E + D++ + L R ND+E P +
Sbjct: 2 ALRFPPRLLSQLKLSRRLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRR 61
Query: 57 F-PFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
F + K C + +++H HI++S F DI + T+++MYAKC L+ A K+F+KM
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
P RD +W +I G++Q L F M G + T+ + +AA +
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 176 SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTY 235
+H F + G D++V V + + Y + + A+LVF +E R VSWN++I G
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNALIAGHAR 239
Query: 236 GDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV 295
+ +L ++ M+ DGFRP + SL +C L QG+ VH++ I G L
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 296 INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 355
NTL+ MY+K G I AR +FD + R VSW ++++ YAQ G EA+ F M G
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 356 VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ ++ LS+++ C SG L+ G + G+ ++D+ + G + A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 416 LFYALP-EKTVVSWTTMIAGCALN 438
+P E T W ++ C ++
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMH 443
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 6/281 (2%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+LL C + L+QGR+VH+H + F D+ + NTL++MY+KCG ++ AR +F+ M R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFD 382
V+WT +ISGY+Q +AL F M G P+ T+ S+I G
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
+ G NV V +AL+D+Y++ G + DA+ +F AL + VSW +IAG A
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS-- 500
+AL+LF M+ RP+ ++ ++ AC+ GFLE+G M K + +L ++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE---KLVAFAGN 301
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ D+ + G + +A + K D W +LL A H
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/601 (31%), Positives = 309/601 (51%), Gaps = 18/601 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W S + + + LF RM+ + PN++TF + A + +H V
Sbjct: 173 WTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSV 232
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K S +FV ++++MYAKC ++ A +F M RD+ SWN ++ G G + L
Sbjct: 233 KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQ 292
Query: 142 LFYNMR---LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
LF++ R + Q+ + TV+ L + K L L + +HS + G + +V +
Sbjct: 293 LFHDSRSSITMLTQSTYATVIKL---CANIKQLGLARQLHSSVLKRGFHSYGNVMTALMD 349
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
AY+K L A +F + G + VVSW ++I GC + + M DG P+
Sbjct: 350 AYSKAGQLGNALDIFL-LMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPND 408
Query: 259 TTVVSLLSSCVC---PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
T ++L++ V P+ +H+ I ++ V L++ YSK + + A +
Sbjct: 409 FTYSTILTASVASLPPQ-------IHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSI 461
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA- 374
F + + VSW+AM++ YAQ GD D A +F M G P+ T+ S+I C A
Sbjct: 462 FKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAG 521
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
++LG+ F + D + V +AL+ MY++ GSI A+ +F ++ +VSW +M++G
Sbjct: 522 VDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSG 581
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
A +G +ALD+F QM + + VTFL+V+ C HAG +E+G YF+ M + Y + P
Sbjct: 582 YAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITP 641
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HY+CM DL R GKL EA+ ++ M + +W TLL ACK+H+N+E+G+ A +L
Sbjct: 642 TMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKL 701
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
LEP +A YV ++NIY+ G+W +R +M +VKK G S + I K +F
Sbjct: 702 LSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIAS 761
Query: 615 D 615
D
Sbjct: 762 D 762
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 221/460 (48%), Gaps = 12/460 (2%)
Query: 60 IAKACAKLSDFLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR 118
+ K C + D + + +HG ++ D+ V T++VDMY K + K+F+ MP R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168
Query: 119 DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+V +W +++ G+ Q G L V+ LF+ MR G+ + VT + + L + VH
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ + G + V VCN+ ++ YAKC ++ A +VF G+E R +VSWN+++ G
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMET--RDMVSWNTLMAGLVLNGH 286
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
++L + +T +++ C + L R +HS + GF +V+
Sbjct: 287 DLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTA 346
Query: 299 LISMYSKCGDIDSARFLFDGMC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ YSK G + +A +F M + VSWTAMI+G Q GD+ A LF M G P
Sbjct: 347 LMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAP 406
Query: 358 DLVTVLSMISGCGQSGALELGKWF--DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
+ T ++++ S ++ NY C+ +V AL+ YSK + +A
Sbjct: 407 NDFTYSTILTASVASLPPQIHAQVIKTNYECTS------IVGTALLASYSKLCNTEEALS 460
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGF 475
+F + +K VVSW+ M+ A G+ A ++F +M L+PN T +V+ AC
Sbjct: 461 IFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTA 520
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
F+ ++ ++ + L S + + RKG ++ A
Sbjct: 521 GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESA 560
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 7/365 (1%)
Query: 108 AYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAI 166
A + FD++P R+ + + + A+ G + + L F ++ R G + ++G+ +
Sbjct: 57 ARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 167 HAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVS 225
L K +H I G D DV V + + Y K + + VF + + R VV+
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPK--RNVVT 172
Query: 226 WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI 285
W S++ G D + + M +G P+ T S+LS + GR VH+ +
Sbjct: 173 WTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSV 232
Query: 286 HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
+G V V N+L++MY+KCG ++ AR +F GM R VSW +++G G EAL+
Sbjct: 233 KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQ 292
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
LF ++ + T ++I C L L + + G V AL+D YS
Sbjct: 293 LFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYS 352
Query: 406 KCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
K G +G+A ++F + + VVSWT MI GC NG+ A LF +M E + PN T+
Sbjct: 353 KAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYS 412
Query: 465 AVLQA 469
+L A
Sbjct: 413 TILTA 417
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 26/317 (8%)
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDS 311
G R +V +L C V G+ +H I G D DV V +L+ MY K +
Sbjct: 98 GGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVD 157
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
R +F+ M R V+WT++++GY Q G L + + LFF M A G P+ VT S++S
Sbjct: 158 GRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVAS 217
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
G ++LG+ + G V VCN+L++MY+KCG + +AR +F + + +VSW T+
Sbjct: 218 QGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTL 277
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-----------HAGFLEKGW 480
+AG LNG +EAL LFH + T+ V++ C H+ L++G+
Sbjct: 278 MAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGF 337
Query: 481 -GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
Y N+MT + D + G+L ALD M + W ++ C
Sbjct: 338 HSYGNVMT-------------ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCI 384
Query: 540 IHRNIEIGEYVAYRLFE 556
+ ++ + + R+ E
Sbjct: 385 QNGDVPLAAALFSRMRE 401
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 8/306 (2%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + W + I + + A LF RM+++ + PN+ T+ I A S
Sbjct: 370 SQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA----SVASLPPQ 425
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++K+ + V T ++ Y+K + A +F + +DV SW+AM+ +AQ G
Sbjct: 426 IHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGD 485
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ +F M + G++ + T+ + A A + L + H+ I + V +
Sbjct: 486 SDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSS 545
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+S YA+ ++ A+ +F + R +VSWNS++ G +L+ +R M +G
Sbjct: 546 ALVSMYARKGSIESAQCIFE--RQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGI 603
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D T +S++ C + +G R S YG + ++ +YS+ G +D A
Sbjct: 604 EMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAM 663
Query: 314 FLFDGM 319
L +GM
Sbjct: 664 SLIEGM 669
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 3/224 (1%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K+ + W++ + ++ A +F +M + ++PN T + ACA + +
Sbjct: 463 KMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGV 522
Query: 72 -YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ H +K + V + +V MYA+ ++ A +F++ DRD+ SWN+M+ G+
Sbjct: 523 DLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGY 582
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDAD 189
AQ G+ +K L +F M GI+ D VT + + HA + + S G+
Sbjct: 583 AQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPT 642
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+ + Y++ L A + G+ +V W +++G C
Sbjct: 643 MEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMV-WRTLLGAC 685
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 300/583 (51%), Gaps = 5/583 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + V + L L +M++ +++ N + A++ D + I+ + +
Sbjct: 267 WATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYAL 326
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ SDI V T +V MYAKC L A +LF + RD+ +W+A + + G+ +VL
Sbjct: 327 QMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLS 386
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M+ G++ D + L ++ L K +H + I +++D+S+ T +S Y
Sbjct: 387 IFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYI 446
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT-YGDKFDDSLNFYRHMIYDGFRPDVTT 260
+ A +F ++ ++ +V WN++I G T YGD +L + + G PD T
Sbjct: 447 RFELFTYAMTLFNRMQ--IKDIVVWNTLINGFTKYGDP-HLALEMFNRLQLSGILPDSGT 503
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+V L S+C + L G +H GF+ D+ V L+ MY+KCG + S LF
Sbjct: 504 MVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTK 563
Query: 321 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
+ VSW MI+GY G +EA+ F M+ P+LVT ++++ L
Sbjct: 564 HVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAM 623
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
F G ++ N+LIDMY+KCG + + + F+ + K +SW M++ A++G
Sbjct: 624 AFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHG 683
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ A+ LF M E ++R + V++++VL AC H+G +++GW F M + + V P + HY
Sbjct: 684 QGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHY 743
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM DLLG G E L + M + DA +WG LL ACKIH N+ +GE + L +LEP
Sbjct: 744 ACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEP 803
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ +V +++IYA GRW+ R+ + + +KK PG S V
Sbjct: 804 RNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 227/456 (49%), Gaps = 4/456 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
++ ++ +NS I+ + HKA+ L+ + K ++P+ TF F+ KAC DF
Sbjct: 60 KNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGV 119
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
I+ IV + D+++ T+++DM+ K LD A +FDKMP +D WNAMI G +Q
Sbjct: 120 NIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSL 179
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L +F+ M++ G + D V+++ L A + KS+H + + + VS N
Sbjct: 180 NPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVVS--N 237
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ I Y KC D+ A+ VF + G+R VSW +++ G + + L M
Sbjct: 238 SLIDMYCKCGDVHSAQRVFDRM--GVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNV 295
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+ + VV+ L L +G+ ++++ + G D+ V ++ MY+KCG++ AR
Sbjct: 296 KMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARE 355
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LF + R V+W+A +S + G E L +F M+ G PD + ++SGC +
Sbjct: 356 LFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISN 415
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ LGK YA ++ ++ + L+ MY + A LF + K +V W T+I G
Sbjct: 416 IGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLING 475
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
G+ AL++F+++ + P+ T + + AC
Sbjct: 476 FTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSAC 511
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 14/428 (3%)
Query: 112 FDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
F ++ + + +N+ I +++ K + L++ + +G++ D T + +A A
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+++ + G++ DV + + I + K L A VF + ++ V WN++I
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMP--VKDGVCWNAMIS 173
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + ++L + M +GF D ++++L P G + IH G+ +
Sbjct: 174 GLSQSLNPCEALEMFWRMQMEGFEVDKVSILNL-----APAVSRLGDVGCCKSIH-GYVV 227
Query: 292 DVS----VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
S V N+LI MY KCGD+ SA+ +FD M R VSW M++GY + G E L+L
Sbjct: 228 RRSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLL 287
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M + V V++ + + LE GK NYA GL +++V ++ MY+KC
Sbjct: 288 HKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKC 347
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + ARELF +L + +V+W+ ++ G E L +F M L+P++ ++
Sbjct: 348 GELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILV 407
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
CT + G K + +++ + + + R A+ M IK D
Sbjct: 408 SGCTEISNIGLGKIMHCYAIKA-DMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIK-D 465
Query: 528 AGIWGTLL 535
+W TL+
Sbjct: 466 IVVWNTLI 473
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 16/322 (4%)
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+++ +NS I + F ++N Y ++ G +PD T +L +C +G ++
Sbjct: 63 SLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIY 122
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ G + DV + +LI M+ K G +D+AR +FD M + V W AMISG +Q +
Sbjct: 123 KDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPC 182
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EAL +F+ M+ G D V++L++ + G + K Y + +V N+LI
Sbjct: 183 EALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLI 240
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
DMY KCG + A+ +F + + VSW TM+AG NG + E L L H+M +++ N+V
Sbjct: 241 DMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKV 300
Query: 462 TFLAVLQACTHAGFLEKGWGYFN------LMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
+ L LEKG +N LM+ + P + Y+ + G+LK+A
Sbjct: 301 AVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYA-------KCGELKKA 353
Query: 516 LDFVQSMPIKSDAGIWGTLLCA 537
+ S+ + D W L A
Sbjct: 354 RELFLSLEGR-DLVAWSAFLSA 374
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 398 NALIDMYSKCGSIGDAREL---FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
N + + + C I ++ F + +++ + + I + F +A++L+H ++++
Sbjct: 34 NHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKI 93
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKL 512
L+P++ TF VL+ACT A +G N+ + E + Y + + D+ + G L
Sbjct: 94 GLKPDKFTFNFVLKACTSALDFHEG---VNIYKDIVFNGLECDVYIGTSLIDMFCKMGCL 150
Query: 513 KEALDFVQSMPIKSDAGIWGTLL 535
A + MP+K D W ++
Sbjct: 151 DNARNVFDKMPVK-DGVCWNAMI 172
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 289/542 (53%), Gaps = 31/542 (5%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
L A +F+ + + ++ WN M G A L L+ M +G+ + T L ++
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF----------- 213
K +H + +G + D+ V + IS Y + L+ A VF
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 214 ---------RGIEEGLRT---------VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
RG E R VVSWN++I G + ++L ++ M+ R
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
PD +T+V+++S+ ++ GR VHS +GF ++ ++N LI YSKCG++++A L
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F G+ + +SW +I GY EAL LF M +GE P+ VT+LS++ C GA+
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 376 ELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
++G+W Y G+ + + +LIDMYSKCG I A ++F ++ K++ +W MI
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A++G A D+F +M + +++P+ +TF+ +L AC+HAG L+ G F MT Y++
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P+L HY CM DLLG G KEA + + +M ++ D IW +LL ACK+H N+E+GE A
Sbjct: 433 PKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQN 492
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LF++EP++ YV ++NIYA GRW+ VA +R ++ +KK PG S + I+ F +
Sbjct: 493 LFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFII 552
Query: 614 ED 615
D
Sbjct: 553 GD 554
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 253/531 (47%), Gaps = 66/531 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R + AL L+ M + PN+ TFPF+ K+CAKL IHGH++
Sbjct: 31 WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVL 90
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK--------------------------- 114
K + D++V T+++ MY + +RL+ A+K+FD+
Sbjct: 91 KLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARN 150
Query: 115 ----MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+P +DV SWNAMI G+ + G ++ L LF M ++ D T++ + A+ +
Sbjct: 151 MFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGS 210
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G +++ + N I Y+KC +++ A +F G+ + V+SWN +I
Sbjct: 211 IELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGL--SYKDVISWNILI 268
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG T+ + + ++L ++ M+ G P+ T++S+L +C A+ GR +H + G
Sbjct: 269 GGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKG 328
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S+ +LI MYSKCGDI++A +F+ M ++ +W AMI G+A G + A +F
Sbjct: 329 VTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFS 388
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDM 403
M PD +T + ++S C +G L+LG+ NY + L+ +ID+
Sbjct: 389 RMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEH----YGCMIDL 444
Query: 404 YSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
G +A E+ + E V W +++ C ++G VE + F Q + + PN
Sbjct: 445 LGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGN-VELGEKFAQNL-FKIEPNNP- 501
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
G + L++ +Y N + + LL KG K
Sbjct: 502 ------------------GSYVLLSNIYATAGRWNEVARIRGLLNDKGMKK 534
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 311/620 (50%), Gaps = 22/620 (3%)
Query: 15 RSSTINQ--WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + AL FR M D+EP++ T +A AC+
Sbjct: 154 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEG 213
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
L + +H + ++ + F+ T+V MY K +L + L RD+ +WN ++
Sbjct: 214 LLMGKQVHAYGLRKGELNS-FIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSS 272
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDA 188
Q + L M L G++ D T+ + A H + L K +H++ + G +D
Sbjct: 273 LCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 332
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + + Y C + VF G+ + R + WN++I G + +++L +
Sbjct: 333 NSFVGSALVDMYCNCKQVLSGCRVFDGMFD--RKIGLWNAMITGYAQNEYDEEALLLFIE 390
Query: 249 MIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G + TT+ ++ +CV A + +H + G D D V N L+ MYS+ G
Sbjct: 391 MEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLG 450
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM--------EAAGEV--- 356
ID A+ +F M DR V+W +I+GY ++AL + M E A V
Sbjct: 451 KIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLK 510
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++
Sbjct: 511 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 570
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F +P + V++W ++ ++G +A+D+ MM ++PN VTF++V AC+H+G +
Sbjct: 571 FDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMV 630
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWGTLL 535
+G F M K Y V P +HY+C+ DLLGR G++KEA + +P D AG W +LL
Sbjct: 631 NEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLL 690
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
AC+IH N+EIGE A L +LEP+ A+ YV +ANIY+ G W +R MK V+K
Sbjct: 691 GACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRK 750
Query: 596 FPGQSLVHINGKTCTFTVED 615
PG S + + F D
Sbjct: 751 EPGCSWIEHGDEVHKFVAGD 770
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 272/548 (49%), Gaps = 22/548 (4%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I +S + W +R V N +A+L + M I+P+N FP + KA A L D
Sbjct: 52 ISQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDL 111
Query: 73 SQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH H+ K + D + V T+V++Y KC YK+FD++ +R+ SWN++I
Sbjct: 112 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 171
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLLKSVHSFGIHIGVDA 188
E L F M ++ T++ + A + + L + K VH++G+ G +
Sbjct: 172 SFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-EL 230
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + NT ++ Y K L ++++ G EG R +V+WN+++ ++F ++L + R
Sbjct: 231 NSFIINTLVAMYGKMGKLASSKVLL-GSFEG-RDLVTWNTVLSSLCQNEQFLEALEYLRE 288
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCG 307
M+ +G PD T+ S+L +C E L G+ +H++ + G D + V + L+ MY C
Sbjct: 289 MVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 348
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMI 366
+ S +FDGM DR W AMI+GYAQ +EAL LF M E+AG + + T+ ++
Sbjct: 349 QVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVV 408
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C +SGA + + GL + V NAL+DMYS+ G I A+ +F + ++ +V
Sbjct: 409 PACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLV 468
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELD-----------LRPNRVTFLAVLQACTHAGF 475
+W T+I G + +AL + H+M L+ L+PN +T + +L +C
Sbjct: 469 TWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSA 528
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
L KG K + ++ S + D+ + G L+ + +PI+ + W ++
Sbjct: 529 LAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIV 586
Query: 536 CACKIHRN 543
A +H N
Sbjct: 587 MAYGMHGN 594
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 15/242 (6%)
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
W ++ + L EA+ + M G PD +++ ++LGK +
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 387 SGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEAL 445
G D+V V N L+++Y KCG G ++F + E+ VSW ++I+ ++ AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV----NPELNHY-- 499
+ F M++ D+ P+ T ++V AC++ E LM K ELN +
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEG-----LLMGKQVHAYGLRKGELNSFII 235
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA-CKIHRNIEIGEYVAYRLFE-L 557
+ + + G+ GKL + + S + D W T+L + C+ + +E EY+ + E +
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGR-DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGV 294
Query: 558 EP 559
EP
Sbjct: 295 EP 296
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 289/528 (54%), Gaps = 10/528 (1%)
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
T ++ Y + ++ A LFD+MP+RDV +W AMI G+A + F+ M G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRS 108
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN-DLKMAEL 211
+ T+ + ++ + K L+ VH + +G++ + V N ++ YA C+ ++ A L
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFL 168
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG--FRPDVTTVVSLLSSCV 269
+FR I+ ++ V+W ++I G T+ L Y+ M+ + P T+ S+ +
Sbjct: 169 IFRDIK--VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASI 226
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTA 329
+++ G+ +H+ + GF ++ V+N+++ Y +CG + A+ F M D+ ++W
Sbjct: 227 --DSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNT 284
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
+IS ++ D EAL +F E+ G VP+ T S+++ C AL G+ G
Sbjct: 285 LISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRG 343
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLF 448
NV + NALIDMY+KCG I D+ +F + E+ +VSWT+M+ G +G EA++LF
Sbjct: 344 FNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
+M+ +RP+R+ F+AVL AC HAG +EKG YFN+M Y +NP+ + Y+C+ DLLGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE-IGEYVAYRLFELEPHSAAPYVE 567
GK+ EA + V+ MP K D WG +L ACK H++ I A ++ EL+P YV
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVM 523
Query: 568 MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ IYA G+W A +R MM+ KK G S + + + +F V D
Sbjct: 524 LSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSD 571
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 200/418 (47%), Gaps = 7/418 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N A F M K PN T + K+C + Y ++HG +V
Sbjct: 79 WTAMITGYASSNYNSCAWECFHEMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV 138
Query: 82 KSPFWSDIFVQTTMVDMYAKCD-RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K ++V +++MYA C ++ A+ +F + ++ +W +I GF +G L
Sbjct: 139 KLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ M L + +A+ ++ K +H+ + G +++ V N+ + Y
Sbjct: 199 KMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFY 258
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C L A+ F +E+ + +++WN++I D + L F R GF P+ T
Sbjct: 259 CRCGYLSEAKRYFHEMED--KDLITWNTLISELERSDSSEALLMFQR-FESQGFVPNCYT 315
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DSARFLFDGM 319
SL+++C AL G+ +H GF+ +V + N LI MY+KCGDI DS R +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIE 375
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
R VSWT+M+ GY G EA+ LF M ++G PD + ++++S C +G +E G
Sbjct: 376 ERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
K+F+ G+ + + N ++D+ + G IG+A EL +P K S W ++ C
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
K +++ N ++ + K G + +AR LF +PE+ VV+WT MI G A + A + FH+
Sbjct: 43 KHHILATNLIVSYFEK-GLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHE 101
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMAD 504
M + PN T +VL++C + L G ++ K +Y N +N Y+ +
Sbjct: 102 MFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSV 161
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
++ A + + +K+D W TL+ H IG Y+ LE P
Sbjct: 162 ------TMEAAFLIFRDIKVKNDV-TWTTLITGF-THLGDGIGGLKMYKQMLLENADVTP 213
Query: 565 Y 565
Y
Sbjct: 214 Y 214
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 291/575 (50%), Gaps = 3/575 (0%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
R M K I N ++ ++ K C L ++ H + + S+ F+ ++ MY
Sbjct: 79 FIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMAN-SNKFIDNCILKMYC 137
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
C A + FDK+ D+D++SW+ +I + + G +++ + LF M +GI +
Sbjct: 138 DCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFST 197
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L + L L K +HS I IG A++S+ + Y KC L AE+ +
Sbjct: 198 LIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTR-- 255
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ V+ ++ G T + D+L + MI +G D +L +C L G+ +
Sbjct: 256 KNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQI 315
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
HS+ I G + +VSV L+ Y KC ++AR F+ + + SW+A+I+GY Q G
Sbjct: 316 HSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQF 375
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
D AL +F A+ + G + + ++ C L G A GL + +A+
Sbjct: 376 DRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAM 435
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
I MYSKCG + A + F + + V+WT +I A +G+ EAL LF +M +RPN
Sbjct: 436 ISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNA 495
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VTF+ +L AC+H+G +++G + M+ Y VNP ++HY+CM D+ R G L+EAL+ ++
Sbjct: 496 VTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIR 555
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
S+P + D W +LL C HRN+EIG A +F L+P +A YV M N+YAL G+WD
Sbjct: 556 SLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDE 615
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A R MM ++K S + + GK F V D
Sbjct: 616 AAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGD 650
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 207/419 (49%), Gaps = 4/419 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
++ W++ I ++ +A+ LF RM I PN+ F + + S + IH
Sbjct: 157 LSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHS 216
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ F ++I ++T + +MY KC LD A +KM ++ + ++VG+ +
Sbjct: 217 QLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRD 276
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF M G++ D + +A L K +HS+ I +G++++VSV +
Sbjct: 277 ALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVD 336
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC + A F I E SW+++I G +FD +L ++ + G +
Sbjct: 337 FYVKCARFEAARQAFESIHEP--NDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNS 394
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
++ +C L+ G +H+ I G +S + +ISMYSKCG +D A F
Sbjct: 395 FIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLT 454
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ V+WTA+I +A G EALRLF M+ +G P+ VT + +++ C SG ++ G
Sbjct: 455 IDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEG 514
Query: 379 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
K D+ + G+ + N +ID+YS+ G + +A E+ +LP E V+SW +++ GC
Sbjct: 515 KKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGC 573
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 305/601 (50%), Gaps = 10/601 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I + ++L+ FR M + I PN + +C+ L + + IHG +
Sbjct: 178 WNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVV 237
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS-----WNAMIVGFAQMGF 135
VKS + ++ +++++MY KC + A +F+ + D+D WN MI G+ G
Sbjct: 238 VKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGC 297
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF M + GI+ D+ T++ L + ++ K +H G+ ++ V
Sbjct: 298 FSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETA 357
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN-FYRHMIYDGF 254
+ Y KC D+ +FR + ++ W+++I C +L FY + DG
Sbjct: 358 LLDMYLKCGDMGTGLKIFRRSQN--HNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGL 415
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
D +V++L +C +G +H GF DV V + L+ +Y+KC D+ ++
Sbjct: 416 -ADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKK 474
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F + + VSW A+ISGYAQ DEAL+ F M+ P+ VT+ ++S C
Sbjct: 475 VFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSV 534
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ L K Y GL V+V N+LI Y+KCG I + F +PE+ VSW ++I G
Sbjct: 535 MTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILG 594
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
++ E + LF +M+ ++P+ VTF A+L AC+HAG +++G YF M + + + P
Sbjct: 595 MGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKP 654
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+L Y+CM DLLGR G L +A D + +MP D IWG+LL +CK H + + E VA +
Sbjct: 655 QLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHI 714
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
F+L P S V +AN+Y G+ + +R+ +K +KK PG S + ++ F
Sbjct: 715 FKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAG 774
Query: 615 D 615
D
Sbjct: 775 D 775
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 149/548 (27%), Positives = 259/548 (47%), Gaps = 19/548 (3%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLT-FPFIAKA 63
S P KI +++ N+ IRE + A+ ++ +M + ++ FP + KA
Sbjct: 59 SSKPLSTKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKA 118
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
L D + IHGH++K D+ V +++ MY KC ++ A ++F+KMP+ D+ SW
Sbjct: 119 FGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSW 178
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
N MI GF + + L F +M GI + V + + + L+ + +H +
Sbjct: 179 NTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVV 238
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI---EEGLRTVVSWNSIIGGCTYGDKF 239
G+D + + ++ I Y KC +K AE +F I + R V WN +I G F
Sbjct: 239 KSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCF 298
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+L + M+ G +PD +T+VSL S C + G+ +H +G ++ V L
Sbjct: 299 SQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETAL 358
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+ MY KCGD+ + +F + + W+A+IS AQ G +AL LF+ + + D
Sbjct: 359 LDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADS 418
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+++++ C G A G +V V +AL+D+Y+KC +G ++++F
Sbjct: 419 GILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLR 478
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL--- 476
L +K +VSW +I+G A + EAL F M ++RPN VT +L C H +
Sbjct: 479 LSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLC 538
Query: 477 EKGWGYF---NLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
++ GY L + V N + Y+ + G + +L + MP ++D W +
Sbjct: 539 KEVHGYLIRQGLGSTVLVSNSLIATYA-------KCGDINSSLYTFEKMPERNDVS-WNS 590
Query: 534 LLCACKIH 541
++ +H
Sbjct: 591 IILGMGMH 598
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/605 (29%), Positives = 308/605 (50%), Gaps = 3/605 (0%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
+I + W I + + +AL +F +M++ D+ P +T+ I ACA
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
IHG I++ F D+FV T +++MY KC + A+ F ++ RDV SW AMI
Sbjct: 123 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 182
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q L+ M+L G+ + +T+ + A +LS K V+ +++DV
Sbjct: 183 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVR 242
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V N+ ++ + L A +F + + R VV+WN +I + F +++ + +
Sbjct: 243 VMNSAVNMFGNAGLLGDARRLFEDMVD--RDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
DG + + T V +L+ +L +G+++H G+D D V L+S+Y +C
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ 360
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A +F M + ++WT M YAQ G EAL+LF M+ G P T+++++ C
Sbjct: 361 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 420
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
AL+ G+ ++ + ++V ALI+MY KCG + +A +F + ++ ++ W +M
Sbjct: 421 LAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSM 480
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ A +G + E L LF+QM ++ + V+F++VL A +H+G + G+ YF M + +
Sbjct: 481 LGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFS 540
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ P Y C+ DLLGR G+++EA+D V + D +W TLL AC+ H + +
Sbjct: 541 ITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAA 600
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCT 610
A ++ E +P + YV ++N+YA G WDGV +R +M+ VKK PG+S + I +
Sbjct: 601 AEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHE 660
Query: 611 FTVED 615
F D
Sbjct: 661 FLEGD 665
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 241/494 (48%), Gaps = 10/494 (2%)
Query: 51 EPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYK 110
+P+ F + + C+ + + + +H H+ F + V ++ MYA+C + A +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+F+ + +DV +W MI + Q G ++ L +FY M+ + VT + + A +
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L +H + G + DV V I+ Y KC ++ A F+ +E R VVSW ++I
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH--RDVVSWTAMI 178
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH---SHGIHY 287
C D+F + YR M DG P+ T+ ++ ++ P L +G+ V+ S G+
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV-- 236
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
+ DV V+N+ ++M+ G + AR LF+ M DR V+W +I+ Y Q + EA+RLF
Sbjct: 237 -MESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLF 295
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
++ G + +T + M++ +L GK G + +V AL+ +Y +C
Sbjct: 296 GRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRC 355
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
+ G A ++F + K V++WT M A NG EAL LF +M RP T +AVL
Sbjct: 356 EAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVL 415
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
C H L+KG + + + + E+ + + ++ G+ GK+ EA+ + M K D
Sbjct: 416 DTCAHLAALQKGRQIHSHIIE-NRFRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRD 473
Query: 528 AGIWGTLLCACKIH 541
+W ++L A H
Sbjct: 474 ILVWNSMLGAYAQH 487
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 6/301 (1%)
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+PD V+LL C + + GR VH H GF+ + V LI MY++CG + A+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F+ + + +WT MI Y Q+GD D AL +F+ M+ +P VT +++++ C + +
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+ G G + +V V ALI+MY+KCGS+ A + F L + VVSWT MIA
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
C + +F A L+ +M + PN++T V A +L +G + L++ +
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV-MES 239
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
++ + ++ G G L +A + M + D W ++ + N GE A RL
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNEN--FGE--AVRL 294
Query: 555 F 555
F
Sbjct: 295 F 295
>gi|449522624|ref|XP_004168326.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Cucumis sativus]
Length = 616
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 301/571 (52%), Gaps = 18/571 (3%)
Query: 56 TFPF-IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK 114
+F F + KA A ++ ++H +VK +++ VQ ++ +Y KC LD A LFD+
Sbjct: 17 SFSFNVLKAAAPVNSIPRDTLLHSLVVKLGLINELSVQNKLLRVYVKCRDLDSARTLFDE 76
Query: 115 MPDRDVASWNAMIVGFAQMGF------LEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIH 167
M R+V SWN +I G G+ + + L++ L+G + D +T GL ++ +
Sbjct: 77 MARRNVVSWNTVICGLVDGGYGGEFKMRQHSIFLYFKKMLMGLVDPDGITFNGLFRSCVV 136
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+ + +HSF + IG D D V + + YAKC + A L F I R +V WN
Sbjct: 137 LNDVESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCGLYEDARLAFSCIL--YRDLVLWN 194
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++ C + +++ +R M +GF+ D T SLLS C + G+ +H I
Sbjct: 195 VMLYCCVFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGSGELGKQLHCLLIKQ 254
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
FDLD+ V ++L+++Y+K ++ AR +FD M R VSWT MI GY Q EA++LF
Sbjct: 255 SFDLDILVASSLVNVYAKNDNLYDARKVFDEMPTRNSVSWTTMIVGYGQHEYGKEAVKLF 314
Query: 348 FAMEAAGEVPDLVTVLSMISGCG-QSGALELGKWFDNYAC--SGGLKDNVMVCNALIDMY 404
M PD +T S++S CG SGA EL ++C G + + + N LI Y
Sbjct: 315 RRMLRKDYCPDELTFASLLSSCGFTSGASEL---MQVHSCLIKLGFEAFLSINNGLIYAY 371
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKCG I A + F + E +V+WT++I G AL G +A+ LF +M+ +RP+++ FL
Sbjct: 372 SKCGIIAAALQCFRLVAEPDLVTWTSIICGLALCGLEKDAVKLFDKMLSYGIRPDKIAFL 431
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
VL AC+H GF+ G YFNLMT YQ+ P+ H +C+ DLLGR G L +A D ++SMP
Sbjct: 432 GVLSACSHGGFVSMGLHYFNLMTNQYQLVPDSEHLTCLIDLLGRAGSLDQAFDLLKSMPK 491
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
++ + AC+ H N+ + + F EP Y ++N+YA GRW VA +
Sbjct: 492 EAGPDALRAFIRACRTHGNLRLAKRAME--FASEPDEPVNYSLVSNMYASEGRWSDVARM 549
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R ++ +K PG S V I G F D
Sbjct: 550 RKLINDRCEQKTPGLSWVEIAGYNHLFISGD 580
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 207/452 (45%), Gaps = 15/452 (3%)
Query: 18 TINQWNSQIREAVD-------KNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF 70
+ WN+ I VD K H L F++M ++P+ +TF + ++C L+D
Sbjct: 81 NVVSWNTVICGLVDGGYGGEFKMRQHSIFLYFKKMLMGLVDPDGITFNGLFRSCVVLNDV 140
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ +H ++K F D FV + +VD YAKC + A F + RD+ WN M+
Sbjct: 141 ESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCGLYEDARLAFSCILYRDLVLWNVMLYCC 200
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
+ + +F M+L G + D T L + L K +H I D D+
Sbjct: 201 VFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGSGELGKQLHCLLIKQSFDLDI 260
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V ++ ++ YAK ++L A VF E R VSW ++I G + +++ +R M+
Sbjct: 261 LVASSLVNVYAKNDNLYDARKVFD--EMPTRNSVSWTTMIVGYGQHEYGKEAVKLFRRML 318
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ PD T SLLSSC + VHS I GF+ +S+ N LI YSKCG I
Sbjct: 319 RKDYCPDELTFASLLSSCGFTSGASELMQVHSCLIKLGFEAFLSINNGLIYAYSKCGIIA 378
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+A F + + V+WT++I G A G +A++LF M + G PD + L ++S C
Sbjct: 379 AALQCFRLVAEPDLVTWTSIICGLALCGLEKDAVKLFDKMLSYGIRPDKIAFLGVLSACS 438
Query: 371 QSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSW 428
G + +G +F+ L + LID+ + GS+ A +L ++P E +
Sbjct: 439 HGGFVSMGLHYFNLMTNQYQLVPDSEHLTCLIDLLGRAGSLDQAFDLLKSMPKEAGPDAL 498
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
I C +G L L + ME P+
Sbjct: 499 RAFIRACRTHGN----LRLAKRAMEFASEPDE 526
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 172/380 (45%), Gaps = 30/380 (7%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+YR + WN + V + + +A+ +FR M+ + ++ TF + C
Sbjct: 186 LYRDLVL--WNVMLYCCVFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGSGEL 243
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H ++K F DI V +++V++YAK D L A K+FD+MP R+ SW MIVG+ Q
Sbjct: 244 GKQLHCLLIKQSFDLDILVASSLVNVYAKNDNLYDARKVFDEMPTRNSVSWTTMIVGYGQ 303
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ ++ + LF M D +T L + S L VHS I +G +A +S+
Sbjct: 304 HEYGKEAVKLFRRMLRKDYCPDELTFASLLSSCGFTSGASELMQVHSCLIKLGFEAFLSI 363
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N I AY+KC + A FR + E +V+W SII G D++ + M+
Sbjct: 364 NNGLIYAYSKCGIIAAALQCFRLVAEP--DLVTWTSIICGLALCGLEKDAVKLFDKMLSY 421
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL---------DVSVINTLISMY 303
G RPD + +LS+C G V S G+HY F+L D + LI +
Sbjct: 422 GIRPDKIAFLGVLSAC------SHGGFV-SMGLHY-FNLMTNQYQLVPDSEHLTCLIDLL 473
Query: 304 SKCGDIDSARFLFDGMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
+ G +D A L M + A I G+L A R AME A E PD
Sbjct: 474 GRAGSLDQAFDLLKSMPKEAGPDALRAFIRACRTHGNLRLAKR---AMEFASE-PDEPVN 529
Query: 363 LSMISGCGQSGALELGKWFD 382
S++S S G+W D
Sbjct: 530 YSLVSNMYASE----GRWSD 545
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 292/558 (52%), Gaps = 30/558 (5%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM- 146
++F + ++ A + +LF MP+RD S+NA+I GF+ G + + L+ +
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 147 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
R ++ +T+ + A +L SVH + +G A V + + YAK +
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 207 KMAELVFRGIE-----------------------EGL------RTVVSWNSIIGGCTYGD 237
+ A VF+ +E +GL R ++W +++ G T
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
++L+ +R M +G D T S+L++C AL +G+ +H++ ++ +V V +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MYSKC I A +F M R +SWTAMI GY Q +EA+R F M+ G P
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T+ S+IS C +LE G F A GL + V NAL+ +Y KCGSI DA LF
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ VSWT ++ G A G+ E +DLF +M+ L+P+ VTF+ VL AC+ AG +E
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVE 497
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
KG YF+ M K + + P +HY+CM DL R G+ KEA +F++ MP DA W TLL +
Sbjct: 498 KGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
C++ N+EIG++ A L E +P + A YV + +++A G+W VA+LR M+ QVKK P
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 598 GQSLVHINGKTCTFTVED 615
G S + K F+ +D
Sbjct: 618 GCSWIKYKNKVHIFSADD 635
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 223/478 (46%), Gaps = 43/478 (8%)
Query: 1 MAASSLPPRLNKIYRSSTIN---QWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLT 56
+A S L P + +++ S +N+ I +++ L+R + ++ + P +T
Sbjct: 89 LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK--------------- 101
+ + LSD +H +++ F + FV + +VDMYAK
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208
Query: 102 ----------------CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN 145
C ++ A LF M DRD +W M+ G Q G + L +F
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
MR G+ D T + A L K +H++ + +V V + + Y+KC
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS 328
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+++AE VFR + R ++SW ++I G ++++ + M DG +PD T+ S++
Sbjct: 329 IRLAEAVFRRMT--CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVI 386
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
SSC +L +G H + G ++V N L+++Y KCG I+ A LFD M +V
Sbjct: 387 SSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 446
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNY 384
SWTA+++GYAQ G E + LF M A G PD VT + ++S C ++G +E G +FD+
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSM 506
Query: 385 ACSGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNG 439
G+ D+ C +ID+YS+ G +A E +P W T+++ C L G
Sbjct: 507 QKDHGIVPIDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 45/364 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + +AL +FRRM+ + + TF I AC L+ + IH +I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 305
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + ++FV + +VDMY+KC + A +F +M R++ SW AMIVG+ Q E+ +
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M++ GI+ D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F E VSW +++ G K ++++ + M+ +G +PD T
Sbjct: 426 KCGSIEDAHRLFD--EMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTF 483
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +LS+C S+ G ++ FD M
Sbjct: 484 IGVLSAC-----------------------------------SRAGLVEKGCDYFDSMQK 508
Query: 322 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ +T MI Y++ G EA M + PD +++S C G +E
Sbjct: 509 DHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNME 565
Query: 377 LGKW 380
+GKW
Sbjct: 566 IGKW 569
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/633 (31%), Positives = 313/633 (49%), Gaps = 100/633 (15%)
Query: 68 SDFLY---SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD--------------------- 103
SD L+ + IH + KS S+ F+Q ++++MY KC
Sbjct: 77 SDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYN 136
Query: 104 ----------RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
+LD A +LFD+MP + S+ MI+GF+Q + + LF MR VG+
Sbjct: 137 VMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVP 196
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
+ VT+ L A H + + +H I + + V V + Y C+ L A +F
Sbjct: 197 NEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALF 256
Query: 214 RGIEEGLRTVVSWNSIIGG----------------------CTYG---------DKFDDS 242
+ E + +VSWN ++ G T+G ++ +++
Sbjct: 257 DEMPE--KNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEA 314
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L YR MI G+ P+ +V L+S C A+ +G+ + S + GFD + +T+I +
Sbjct: 315 LMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHL 374
Query: 303 YSKCGDI-------------------------------DSARFLFDGMCDRTRVSWTAMI 331
Y+ CG I D A LF+ M +R SW+ MI
Sbjct: 375 YAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMI 434
Query: 332 SGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 391
SGY Q + AL LF M A+G P+ VT++S++S SG L+ G+W Y + +
Sbjct: 435 SGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSIT 494
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEK--TVVSWTTMIAGCALNGEFVEALDLFH 449
+ + A+IDMY+KCGSI +A E+FY + EK TV W +I G A++G +L +F
Sbjct: 495 VSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFS 554
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRK 509
+ ++ N +TF+ VL AC H G +E G +F M + ++P++ HY CM DLLGR
Sbjct: 555 DLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRA 614
Query: 510 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMA 569
G+L+EA + ++SMP+K+D IWGTLL AC+ H N+++GE A L LEP A V ++
Sbjct: 615 GRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLS 674
Query: 570 NIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+YA G+W+ +R M+ +++++ PG S V
Sbjct: 675 NMYADAGKWEDAFLVRRAMQSHRMQRLPGYSGV 707
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 217/474 (45%), Gaps = 65/474 (13%)
Query: 31 DKNEA-HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI 89
+NE ++A+ LF++M+ + PN +T + A + +M+HG ++K F +
Sbjct: 174 SQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFV 233
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE------------ 137
V T ++ MY C L A LFD+MP++++ SWN M+ G+++ GF++
Sbjct: 234 LVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNK 293
Query: 138 -------------------KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
+ L ++ +M G + + V ++ L ++ + +
Sbjct: 294 DLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLL 353
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR-GIEEGL----------------- 220
S + +G D + +T I YA C + A L FR G +E +
Sbjct: 354 SAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMID 413
Query: 221 -----------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
R V SW+++I G T ++ + +L + M+ G +P+ T+VS+LS+
Sbjct: 414 RAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIA 473
Query: 270 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR--TRVSW 327
L +GR H + + + ++ +I MY+KCG I++A +F + ++ T W
Sbjct: 474 TSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPW 533
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYAC 386
A+I G A G + +L++F +E + +T + +++ C G +E GK F +
Sbjct: 534 NAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKS 593
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALNG 439
+ ++ ++D+ + G + +A E+ ++P K VV W T++A C +G
Sbjct: 594 EHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHG 647
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 149/358 (41%), Gaps = 35/358 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V ++AL+++R M EPN++ + C + Q + +V
Sbjct: 298 WGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVV 357
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRL-------------------------------DCAYK 110
K F F+Q+T++ +YA C R+ D A +
Sbjct: 358 KMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAME 417
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
LF++MP+RDV SW+ MI G+ Q L LF+ M GI+ + VT++ + A +
Sbjct: 418 LFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGT 477
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L + H + + + ++ I YAKC + A VF I E TV WN+II
Sbjct: 478 LKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAII 537
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH--SHGIHYG 288
G + SL + + + + T + +L++C C LV+ H S +
Sbjct: 538 CGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTAC-CHVGLVESGKRHFMSMKSEHS 596
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WTAMISGYAQKGDLDEALR 345
D D+ ++ + + G ++ A + M + V W +++ G++D R
Sbjct: 597 IDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGER 654
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 39/242 (16%)
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
RH Y+ +VS L C L QG+ +H G + + N+LI+MY KC
Sbjct: 61 RHFNYE------LVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKC 114
Query: 307 GDIDSARFLFDGMCDRT-RVSWTAMISGYAQKGDLD------------------------ 341
G + A+ +FD +C R+ VS+ MISGY + G LD
Sbjct: 115 GLLVDAKSIFD-VCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGF 173
Query: 342 -------EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
+A+ LF M G VP+ VT+ +++S G + + ++ V
Sbjct: 174 SQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFV 233
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+V L+ MY C S+ +AR LF +PEK +VSW M+ G + G A +F ++
Sbjct: 234 LVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNK 293
Query: 455 DL 456
DL
Sbjct: 294 DL 295
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
++ST++ WN+ I A+ +L +F +++ I+ N +TF + AC + + S
Sbjct: 526 KASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVG-LVESG 584
Query: 75 MIHGHIVKSPFW--SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVG 129
H +KS DI MVD+ + RL+ A ++ MP + DV W ++
Sbjct: 585 KRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAA 642
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 296/551 (53%), Gaps = 26/551 (4%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH ++K+ + FV ++ ++ C ++ A +F+++ D DV +N +I +
Sbjct: 34 KQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRN 93
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+F+ M+ G+ AD T L +A + +++ +H+ +G D+ V
Sbjct: 94 SEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVP 153
Query: 194 NTWISAYAKC--NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
N+ I +Y KC + + A VF + E R VSWNS+IGG + ++ + M
Sbjct: 154 NSLIDSYFKCGLDGVAAARKVFEVMAE--RDTVSWNSMIGGLVKVGELGEARRLFDEM-- 209
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-------DVSVINTLISMYS 304
P+ TV ++ G V + ++ F+L +V +T++ YS
Sbjct: 210 ----PERDTV--------SWNTILDG-YVKAGEMNAAFELFEKMPARNVVSWSTMVLGYS 256
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
K GD+D AR LFD M + V WT MISGYA+KG +A+ L+ ME AG D TV+S
Sbjct: 257 KAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVIS 316
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
++S C SG L LGK K + V NALIDMY+KCGS+ +A +F+ + K
Sbjct: 317 ILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKD 376
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
VVSW +I G A++G +AL LF +M P++VTF+ VL ACTHAGF+++G YF+
Sbjct: 377 VVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFH 436
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
M + Y V PE+ HY CM DLLGR G+LKEA V SMP++ +A IWGTLL AC++H
Sbjct: 437 AMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSAT 496
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
+ E V RL + E + ++NIYA G WD AN+R MK ++K G S + +
Sbjct: 497 GLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEV 556
Query: 605 NGKTCTFTVED 615
+ + FTV D
Sbjct: 557 DDEVHEFTVFD 567
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 223/440 (50%), Gaps = 16/440 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ IR V +E A +F M+ + + +N T+PF+ KAC+ +MIH +
Sbjct: 83 YNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVE 142
Query: 82 KSPFWSDIFVQTTMVDMYAKC--DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
K F DIFV +++D Y KC D + A K+F+ M +RD SWN+MI G ++G L +
Sbjct: 143 KMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEA 202
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA-DVSVCNTWIS 198
LF M + D V+ + + A ++ +F + + A +V +T +
Sbjct: 203 RRLFDEMP----ERDTVSWNTILDGYVKAGEMNA-----AFELFEKMPARNVVSWSTMVL 253
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K D+ MA ++F + ++ +V W +I G D++N Y M G + D
Sbjct: 254 GYSKAGDMDMARILFDKMP--VKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDD 311
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TV+S+LS+C L G+ VH+ F V N LI MY+KCG +++A +F G
Sbjct: 312 GTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHG 371
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + VSW A+I G A G ++AL+LF M+ G VPD VT + ++ C +G ++ G
Sbjct: 372 MVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEG 431
Query: 379 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCA 436
+F G+ V ++D+ + G + +A L +++P E + W T++ C
Sbjct: 432 LHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACR 491
Query: 437 LNGEFVEALDLFHQMMELDL 456
++ A ++F ++++ +L
Sbjct: 492 MHSATGLAEEVFDRLVKSEL 511
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 179/381 (46%), Gaps = 30/381 (7%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L+ +K +H+ + + + V I+A++ C + +A VF I++ V+ +N++I
Sbjct: 30 LNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDP--DVLLYNTLI 87
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ + + + M G D T LL +C + ++H+ GF
Sbjct: 88 RAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFC 147
Query: 291 LDVSVINTLISMYSKCG--DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
LD+ V N+LI Y KCG + +AR +F+ M +R VSW +MI G + G+L EA RLF
Sbjct: 148 LDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFD 207
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M D V+ +++ G ++G + + F+ NV+ + ++ YSK
Sbjct: 208 EMPER----DTVSWNTILDGYVKAGEMNAAFELFEKMPAR-----NVVSWSTMVLGYSKA 258
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G + AR LF +P K +V WT MI+G A G +A++L++QM E L+ + T +++L
Sbjct: 259 GDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISIL 318
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC-------MADLLGRKGKLKEALDFVQ 520
AC +G L G K + E + C + D+ + G L+ AL
Sbjct: 319 SACAVSGLLGLG--------KRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFH 370
Query: 521 SMPIKSDAGIWGTLLCACKIH 541
M ++ D W ++ +H
Sbjct: 371 GM-VRKDVVSWNAIIQGLAMH 390
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 15/258 (5%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+L Q + +H+ + + V LI+ +S C + A +F+ + D + + +I
Sbjct: 29 SLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIR 88
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
+ + + A +FF M+ +G D T ++ C + + + G
Sbjct: 89 AHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCL 148
Query: 393 NVMVCNALIDMYSKCG--SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
++ V N+LID Y KCG + AR++F + E+ VSW +MI G GE EA LF +
Sbjct: 149 DIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDE 208
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG--R 508
M E D V++ +L AG + + F M P N S +LG +
Sbjct: 209 MPERDT----VSWNTILDGYVKAGEMNAAFELFEKM-------PARNVVSWSTMVLGYSK 257
Query: 509 KGKLKEALDFVQSMPIKS 526
G + A MP+K+
Sbjct: 258 AGDMDMARILFDKMPVKN 275
>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
Length = 1118
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 302/593 (50%), Gaps = 7/593 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS T N+ +R + + A+LL +R++ + + T + +AC L + +
Sbjct: 530 RSPTPRLANALLRAHIRARQWRAAILLGQRLR---VRRDGFTLSLLLRACTALPSLTHGR 586
Query: 75 MIHGHIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+H V+S S D FV T +V MY++C + A + + D+ +++ G+ Q
Sbjct: 587 AVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQN 646
Query: 134 GFLEKVLCLF-YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G E+ L F N+ G+ VT++ + AA H+ ++ H++ + + D+++
Sbjct: 647 GMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQACHAYVVRNSLSYDLAL 706
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N + Y K DL+ + +F G+ + R V++W+ +I G YR M+
Sbjct: 707 VNAVLGFYVKIGDLQASMRLFEGMTD--RDVITWSCMIKGYVQHGDAHTGFRMYREMVKA 764
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+P+ T+VS+L +C +G+ +H + G +L++ V L+ MY KC + A
Sbjct: 765 RVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKCSCHEEA 824
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
LF M + V+W A+I G Q E+L F M VPD VT++ +++ C +
Sbjct: 825 MRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEF 884
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G L Y G +N V AL+D+YSKCG + A +F EK +V W +MI
Sbjct: 885 GGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMI 944
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
AG +G EA+ L+ +M+ ++PN VTFL+VL AC+H+G +++G F+ MT+V+ V
Sbjct: 945 AGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQEGIQIFDSMTQVFGV 1004
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P H S M DLLGR G+L+EA+ ++ M ++ A W LL AC+ H N ++ E A
Sbjct: 1005 VPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAACRKHNNTKMSEVAAK 1064
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
L +L+P Y + N+YA +W+ V + R M+K ++K G S V +
Sbjct: 1065 NLLKLDPDHVGYYNLLTNLYAFDEKWENVKDTRDMVKGRDLRKVAGYSSVEVT 1117
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 289/566 (51%), Gaps = 4/566 (0%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
RR + ++ KAC + +++ Y + +H +K +D FV ++VDMYAK
Sbjct: 154 MRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAK 212
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
+ L+CA K+F+++PDR+V SW +MI G Q GF L LF MR + T+ +
Sbjct: 213 AEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATV 272
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A L + +H I G+ ++ + + Y KC +L A VF E
Sbjct: 273 ITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFD--ELSYI 330
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+V W ++I G T D+L + + P+ T ++LS+ L G+ +H
Sbjct: 331 DLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIH 390
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ G V N L+ MY+KC + A +F + ++ V+W +MISGYA+ D
Sbjct: 391 GLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGD 450
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
+AL LF M G PD ++V++ +S G L +GK YA N+ V AL+
Sbjct: 451 DALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALL 510
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
++Y+KCG + AR +F + ++ V+W MI G + G+ ++ LF +M++ + PN +
Sbjct: 511 NLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDI 570
Query: 462 TFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQS 521
F ++L C+H+G + G YF+ M + + + P + HY+CM D+L R G L++AL+F+ +
Sbjct: 571 AFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDN 630
Query: 522 MPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGV 581
MP+++D +WG L C++H ++ E R+ L P YV ++N+Y G WD
Sbjct: 631 MPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKS 690
Query: 582 ANLRTMMKRNQVKKFPGQSLV-HING 606
+R M+ + K PG S V H NG
Sbjct: 691 LAIRRWMQEKGLVKLPGCSSVGHENG 716
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 228/442 (51%), Gaps = 6/442 (1%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W S I V A LLLF +M+++++ P+ T + AC+ L + +HG +
Sbjct: 233 SWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSV 292
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K S+ F+ ++DMY KC LD A +FD++ D+ W MIVG+ Q G L
Sbjct: 293 IKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDAL 352
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF + R I + VT + A+ + LSL KS+H + +G+ V N + Y
Sbjct: 353 RLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMY 412
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC + A+ +F I + VV+WNS+I G + DD+L ++ M G PD +
Sbjct: 413 AKCQAVSEADRIFGRISN--KDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAIS 470
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
VV+ LS+ VC L+ G+ +H + + + F ++ V L+++Y+KCGD+ SAR +FD M
Sbjct: 471 VVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMN 530
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK- 379
DR V+W AMI GY +GD ++ LF M G P+ + S++S C SG + GK
Sbjct: 531 DRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKR 590
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALN 438
+FD+ A + ++ ++D+ ++ G++ DA E +P + S W + GC L+
Sbjct: 591 YFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELH 650
Query: 439 GEFVEALDLFHQMMELDLRPNR 460
A + +MM L P R
Sbjct: 651 SRLQFAEEAIKRMMV--LHPER 670
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 148/461 (32%), Positives = 217/461 (47%), Gaps = 17/461 (3%)
Query: 70 FLYSQMIHGHIVKSP---FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
L +++H ++ P + +T ++ YA L A +FD P D S+ AM
Sbjct: 75 LLSLRVLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAM 134
Query: 127 IVGFAQMGFLEKVLCLFYNMR----LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
+ Q + L ++MR Q DFV + L +A I + S +S+H I
Sbjct: 135 LWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLAL-KACIRSAEYSYGRSLHCDAI 193
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
+G AD V N+ + YAK DL+ A VF I + R VVSW S+I GC D
Sbjct: 194 KVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPD--RNVVSWTSMISGCVQNGFASDG 250
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L + M D P T+ +++++C L QGR +H I G + + L+ M
Sbjct: 251 LLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDM 310
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y KCG++D AR +FD + V WT MI GY Q G+ +ALRLF A P+ VT
Sbjct: 311 YVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTT 370
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+++S Q L LGK A GL + +V NAL+DMY+KC ++ +A +F +
Sbjct: 371 ATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISN 430
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG--- 479
K VV+W +MI+G A N +AL LF QM P+ ++ + L A G L G
Sbjct: 431 KDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSI 490
Query: 480 WGY---FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
GY ++ +Y LN Y+ DLL + E D
Sbjct: 491 HGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMND 531
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 281/509 (55%), Gaps = 13/509 (2%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
++ A+K+FD++P+ + + WNAM G++Q + V+ LF M+ + + + T + ++
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ L + VH F I G A+ V T I YA + A VF + E R V+
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIE--RNVI 118
Query: 225 SWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
+W ++I G T D L R + D+ +++S + + +++ R +
Sbjct: 119 AWTAMINGYITCCD-----LVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDK 173
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ DV NT+++ Y+ GD+ + LF+ M +R SW A+I GY + G E
Sbjct: 174 MPNK----DVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEV 229
Query: 344 LRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
L F M G V P+ T+++++S C + GAL+LGKW YA S G K NV V NAL+D
Sbjct: 230 LSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMD 289
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY+KCG + A ++F ++ K ++SW T+I G A++G +AL+LF M P+ +T
Sbjct: 290 MYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGIT 349
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
F+ +L ACTH G +E G+ YF MT Y + P + HY C+ DLLGR G L A+DF++ M
Sbjct: 350 FIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKM 409
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
PI++DA IW LL AC++++N+E+ E +L E EP + A YV ++NIY GRW VA
Sbjct: 410 PIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVA 469
Query: 583 NLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
L+ M+ KK PG SL+ +N F
Sbjct: 470 RLKVAMRDTGFKKLPGCSLIEVNDYLVEF 498
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 218/418 (52%), Gaps = 15/418 (3%)
Query: 22 WNSQIREAVDKNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ R +NE+HK ++LFR+MK D+ PN TFP I K+C K++ + +H +
Sbjct: 19 WNAMFR-GYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINALKEGEEVHCFV 77
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS F ++ FV TT++DMYA + AY++F +M +R+V +W AMI G+ L
Sbjct: 78 IKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVTAR 137
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF + + D V + I AK ++++ F + DV NT ++ Y
Sbjct: 138 RLFD----LAPERDIVLWNTMISGYIEAK--DVIRARELFDKM--PNKDVMSWNTVLNGY 189
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVT 259
A D+ E +F + E R V SWN++IGG T F + L+ ++ M+ DG P+
Sbjct: 190 ASNGDVMACERLFEEMPE--RNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDA 247
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+V++LS+C AL G+ VH + +G+ +V V N L+ MY+KCG +++A +F M
Sbjct: 248 TLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSM 307
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
++ +SW +I G A G +AL LF M+ AGE PD +T + ++ C G +E G
Sbjct: 308 DNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGF 367
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
+F + + + ++D+ + G + A + +P E V W ++ C
Sbjct: 368 SYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGAC 425
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 293/546 (53%), Gaps = 26/546 (4%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVD-MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++ + SD F + ++D + +K ++ A +F ++ + N M+ + +
Sbjct: 30 IHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTESS 89
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
E+ L + MR G+ D T + +A L V + G DV V N
Sbjct: 90 TPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVN 149
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
IS Y +C + A VF G E + +VSWNS++GG + + +++ N + M
Sbjct: 150 GLISMYCRCGETGWARAVFDGFSE--KDLVSWNSMLGGYVWCGEMENAQNMFDEM----- 202
Query: 255 RPDVTTVVSLLSSCVCPEALVQG---RLVHSHGIHYGFD----LDVSVINTLISMYSKCG 307
P+ V ++ G ++ + FD D+ N++I Y+K G
Sbjct: 203 -PE--------RDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVG 253
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+++ AR +FD M + +SW+ MI GYAQ D EAL LF M G PD V+V+ +S
Sbjct: 254 EMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVS 313
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C Q GAL+ G+W Y + +++V AL+DMY KCGS +AR +F ++PE+ VVS
Sbjct: 314 ACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVS 373
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRP-NRVTFLAVLQACTHAGFLEKGWGYFNLM 486
W MI G +NG EAL+ F QM E++ P + + FL VL AC+HA + +G FN M
Sbjct: 374 WNVMIVGLGMNGFGKEALECFTQM-EMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQM 432
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
VY++ P+L HY C+ DLLGR G+L + + +QSMP+K +A +WG+LL AC+IH+N+ +
Sbjct: 433 KGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTL 492
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
E V RL EL+ + YV M+NIYA G W+G+ +R +MK ++KK G+S++ ++G
Sbjct: 493 AEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDG 552
Query: 607 KTCTFT 612
F
Sbjct: 553 NVEEFV 558
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 202/434 (46%), Gaps = 11/434 (2%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N+ ++ + + +AL + M++ + +N T+PF+ KAC + L ++ G VK
Sbjct: 79 NTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVK 138
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
F D+FV ++ MY +C A +FD ++D+ SWN+M+ G+ G +E +
Sbjct: 139 RGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNM 198
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAK 202
F M + + + + G + K + + F + D+ N+ I YAK
Sbjct: 199 FDEMPERDVVSWSIMIDG------YGKKMGEVNRARVFFDSMPT-RDLVSWNSMIDGYAK 251
Query: 203 CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV 262
++++A +F + + + V+SW+ +I G ++LN +R M+ G +PD +VV
Sbjct: 252 VGEMEVAREIFDKMLQ--KNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVV 309
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
+S+C AL QGR +H + LD+ V L+ MY KCG D AR +F+ M +R
Sbjct: 310 GAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPER 369
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWF 381
VSW MI G G EAL F ME D + L ++ C + + G F
Sbjct: 370 NVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIF 429
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGE 440
+ L+ + L+D+ + G + + + ++P K + W +++ C ++
Sbjct: 430 NQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQN 489
Query: 441 FVEALDLFHQMMEL 454
A + ++ EL
Sbjct: 490 VTLAEIVVERLAEL 503
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 3/177 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
+K+ + + I+ W+ I ++ +AL LFR+M I+P+ ++ AC++L
Sbjct: 262 FDKMLQKNVIS-WSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGA 320
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ IH ++ ++ DI VQT +VDMY KC D A ++F+ MP+R+V SWN MIVG
Sbjct: 321 LDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVG 380
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
GF ++ L F M + I D + +G+ A HA ++ + +H F GV
Sbjct: 381 LGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVT--EGLHIFNQMKGV 435
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 4/197 (2%)
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI-SMYSKCGDIDSARFLFDGM 319
++SLL ++Q +H+ I D + L+ S+ SK +++ A +F +
Sbjct: 14 LLSLLQKSKTSSQILQ---IHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQI 70
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
M+ Y + + ALR + M G + D T ++ CG L G
Sbjct: 71 HQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGG 130
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
A G +V V N LI MY +CG G AR +F EK +VSW +M+ G G
Sbjct: 131 LVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCG 190
Query: 440 EFVEALDLFHQMMELDL 456
E A ++F +M E D+
Sbjct: 191 EMENAQNMFDEMPERDV 207
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 200/606 (33%), Positives = 317/606 (52%), Gaps = 11/606 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
R + W + + A +N HK +L L R+M + PN +T + A ++L D+ +
Sbjct: 143 RHPNVYSW-TILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEA 201
Query: 74 QMIHGHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ IH + D+ + T ++DMYAKC + A +FD+ ++D+A NAMI + Q
Sbjct: 202 RKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQ 261
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+G+ + F ++ G+Q + VT L +A S + H I + DV V
Sbjct: 262 LGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVV 321
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+S Y++C L+ A VF + + VV+WN +I G D++L Y M
Sbjct: 322 NTALVSMYSRCGSLEDARRVFDRMPG--KNVVTWNVMIAGYAQEGYTDEALQLYVSMEAA 379
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DS 311
G PD T V++L SC E L GR +H H + G+D ++V++ LI+MYS CG + D+
Sbjct: 380 GVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDA 439
Query: 312 ARFLFDGMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
G+ + V SWTAM++ + G+ AL LF M+ G ++VT +S I C
Sbjct: 440 VDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACS 499
Query: 371 QSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
GAL G F+ +G L D V++ +LI++Y KCG + A E+F+ L K +V+W
Sbjct: 500 SIGALVEGHAIFERVIVTGYLID-VVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWN 558
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T++A + NGE + +L Q M+LD +PN +T L +L C+H G + K YF M
Sbjct: 559 TILAASSQNGEETLSAELL-QEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVY 617
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ + P HY C+ DLLGR G+L+E F+ S P D+ +W +LL +C IH ++E G
Sbjct: 618 GHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGL 677
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A R+ L+P +A+PYV ++N++A G D V +L + +KK +S + +NG
Sbjct: 678 RAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGVV 737
Query: 609 CTFTVE 614
F V
Sbjct: 738 HEFGVR 743
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 251/541 (46%), Gaps = 19/541 (3%)
Query: 11 NKIYRSSTINQWNSQIREAVDKNEAHKALLLFR----RMKKNDIEPNNLTFPFIAKAC-- 64
+K + N W + + E + A A + + +E N F+ A
Sbjct: 28 DKAFTGGEFNLWAAVVEEPQAHDYAPLAPPTLSDEDVKQRLASLEEQNQKSDFVDPAAYV 87
Query: 65 ---AKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
+ D + I HI S F D + +V+ Y KC + A +F + +V
Sbjct: 88 SLLKQAGDVTALKTIQAHISHSKRFSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNV 147
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SW ++ +AQ G + VL L M L+G+ + VT+ + A + +H+
Sbjct: 148 YSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHAR 207
Query: 181 GIHI-GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+ DV + I YAKC D+ AE+VF + + N++I
Sbjct: 208 AAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARN--KDLACCNAMISAYIQLGYT 265
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D+++ + + G +P+ T L +C R+ H I DV V L
Sbjct: 266 VDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTAL 325
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+SMYS+CG ++ AR +FD M + V+W MI+GYAQ+G DEAL+L+ +MEAAG PD
Sbjct: 326 VSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDE 385
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY- 418
+T ++++ C + L G+ + G ++ V +ALI MYS CGS+GDA ++F+
Sbjct: 386 ITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHK 445
Query: 419 -ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+V+SWT M+ NGE AL LF +M ++ N VTF++ + AC+ G L
Sbjct: 446 GVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALV 505
Query: 478 KGWGYFN-LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
+G F ++ Y ++ L + + +L G+ G+L AL+ + K+ W T+L
Sbjct: 506 EGHAIFERVIVTGYLIDVVLG--TSLINLYGKCGRLDYALEVFHHLSFKNIV-TWNTILA 562
Query: 537 A 537
A
Sbjct: 563 A 563
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 286/544 (52%), Gaps = 9/544 (1%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +KS + I+ ++ YAKC + A K+F + RD SWN MI GF +G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
E L +M+ G D + + + ++ + + VHS + +G + +V +
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH--MIYDGF 254
+ YAKC ++ A VF+ I +R V+WN++I G Y D F+ M +G
Sbjct: 142 LDMYAKCERVEDAFEVFKSI--NIRNSVTWNALISG--YAQVGDRGTAFWLLDCMELEGV 197
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
D T LL+ P+ VH+ + +G D +V N +I+ YS+CG I+ A
Sbjct: 198 EIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAER 257
Query: 315 LFDGMC---DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
+FDG D VSW ++++G++Q G ++AL+ F M + V D +++ C
Sbjct: 258 VFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSD 317
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
L+LG+ G + N V ++LI MYSKCG I DAR+ F A P+ + ++W ++
Sbjct: 318 LATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSL 377
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G A +G ALDLF M + ++ + +TF+AVL AC+H G +E+GW + M Y
Sbjct: 378 IFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYG 437
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ P + HY+CM DLLGR G+L EA +++MP + DA +W TLL AC+ +IE+ VA
Sbjct: 438 IPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVA 497
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
L ELEP YV +++++ RW+ A+++ +MK VKK PG S + + + +F
Sbjct: 498 SHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSF 557
Query: 612 TVED 615
ED
Sbjct: 558 NAED 561
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 245/520 (47%), Gaps = 22/520 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I V+ AL + MK+ + +F I K A + Q +H +V
Sbjct: 68 WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMV 127
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + ++F + ++DMYAKC+R++ A+++F + R+ +WNA+I G+AQ+G
Sbjct: 128 KMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFW 187
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M L G++ D T L L VH+ + G+ +D +VCN I+AY+
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247
Query: 202 KCNDLKMAELVFRG-IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C ++ AE VF G IE VSWNSI+ G + +D+L F+ +M D
Sbjct: 248 ECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYA 307
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++L SC L G+ VH + GF+ + V ++LI MYSKCG I+ AR FD
Sbjct: 308 FSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATP 367
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-K 379
+ ++W ++I GYAQ G AL LFF M+ D +T +++++ C G +E G
Sbjct: 368 KDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWS 427
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALN 438
+ + G+ + +ID+ + G + +A+ L A+P E + W T++ C
Sbjct: 428 FLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTC 487
Query: 439 GEFVEALDLFHQMMELDLRPN--------------RVTFLAVLQACTHAGFLEK--GWGY 482
G+ A + ++EL+ + R A ++ ++K GW +
Sbjct: 488 GDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSW 547
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA---LDFV 519
+ +V N E + ++ R G+L E LD+V
Sbjct: 548 IEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYV 587
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL + + H I G + N +IS Y+KCG+I A +F R VSW MI+
Sbjct: 14 ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIA 73
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G+ G+ + AL +M+ G D + S++ G G +E+G+ + G +
Sbjct: 74 GFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
NV +AL+DMY+KC + DA E+F ++ + V+W +I+G A G+
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGD 181
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 309/613 (50%), Gaps = 14/613 (2%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR +++ WN+ + +A L R M + N ++ A
Sbjct: 54 PRRDEV-------SWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVA 106
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +KS +++F + ++D+YAKC R+ A ++FD MP+R+ SWNA+I
Sbjct: 107 RRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALI 166
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ + G + L LF M G+ D T L A+ L+ +H + G
Sbjct: 167 AGYTESGDMASALELFLEMEREGLVPDEATFASLL-TAVEGPSCFLMHQLHGKIVKYGSA 225
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY- 246
++V N I+AY++C LK + +F GI + +R ++SWN+++G T+ D+++ F+
Sbjct: 226 LGLTVLNAAITAYSQCGSLKDSRRIFDGIGD-IRDLISWNAMLGAYTHNGMDDEAMKFFV 284
Query: 247 RHMIYDGFRPDVTTVVSLLSSCV-CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
R M G PD+ + S++SSC QGR++H I + V N LI+MY++
Sbjct: 285 RMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR 344
Query: 306 CGD---IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
+ ++ A F+ + + VSW +M++GY+Q G +AL+ F M + D
Sbjct: 345 YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAF 404
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ + + L+LGK G N V ++LI MYSK G I DAR+ F +
Sbjct: 405 SAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+ V W MI G A +G+ LF++M++ + +TF+ ++ +C+HAG +++G
Sbjct: 465 SSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
N M Y V + HY+C DL GR G+L +A + SMP + DA +W TLL AC+IH
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+E+ VA LF EP + YV ++++Y+ G W A ++ +MK+ + K PG SL+
Sbjct: 585 NVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLI 644
Query: 603 HINGKTCTFTVED 615
+ + +F ED
Sbjct: 645 EVKNEVHSFNAED 657
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 202/414 (48%), Gaps = 18/414 (4%)
Query: 77 HGHIVKSPF-----WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
H ++KS F W+ + + + D L A ++FD++P RD SWNA++ A
Sbjct: 14 HASLLKSGFAAPTPWNQLLTAYS----RSSPDGLAAARRVFDEVPRRDEVSWNALLAAHA 69
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G + L M G+ ++ + ++A A+ ++ + S + G+ +V
Sbjct: 70 ASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVF 129
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
+ + YAKC ++ A VF G+ E R VSWN++I G T +L + M
Sbjct: 130 AASALLDVYAKCGRVRDARQVFDGMPE--RNTVSWNALIAGYTESGDMASALELFLEMER 187
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
+G PD T SLL++ P + +L H + YG L ++V+N I+ YS+CG +
Sbjct: 188 EGLVPDEATFASLLTAVEGPSCFLMHQL-HGKIVKYGSALGLTVLNAAITAYSQCGSLKD 246
Query: 312 ARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFA-MEAAGEVPDLVTVLSMISGC 369
+R +FDG+ D R +SW AM+ Y G DEA++ F M+ +G PD+ + S+IS C
Sbjct: 247 SRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSC 306
Query: 370 GQSGALE-LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS---IGDARELFYALPEKTV 425
+ G + G+ L+ VCNALI MY++ + DA + F +L K
Sbjct: 307 SEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDT 366
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
VSW +M+ G + +G +AL F M ++R + F A L++ + L+ G
Sbjct: 367 VSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLG 420
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 166/358 (46%), Gaps = 17/358 (4%)
Query: 194 NTWISAYAKC--NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
N ++AY++ + L A VF + R VSWN+++ ++ R M
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPR--RDEVSWNALLAAHAASGAHPEAWRLLRAMHA 86
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G + + S L S G + S + G +V + L+ +Y+KCG +
Sbjct: 87 QGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRD 146
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC-G 370
AR +FDGM +R VSW A+I+GY + GD+ AL LF ME G VPD T S+++ G
Sbjct: 147 ARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEG 206
Query: 371 QSGAL--ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVS 427
S L +L Y + GL V NA I YS+CGS+ D+R +F + + + ++S
Sbjct: 207 PSCFLMHQLHGKIVKYGSALGLT----VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262
Query: 428 WTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLE-KGWGYFNL 485
W M+ NG EA+ F +MM E + P+ +F +++ +C+ G + +G L
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322
Query: 486 MTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ K + V P N M +++A S+ +K D W ++L H
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSMLTGYSQH 379
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 289/575 (50%), Gaps = 3/575 (0%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
R M I N ++ ++ K C L ++ H + + S+ F+ ++ MY
Sbjct: 67 FIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMAN-SNKFIDNCILQMYC 125
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
C A + FDK+ DRD++SW +I + + G +++ + LF M +GI +F
Sbjct: 126 DCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFST 185
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L + L L K +HS I I AD+S+ + Y KC L AE+ +
Sbjct: 186 LIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTR-- 243
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
++ V+ ++ G T + D+L + MI +G D +L +C L G+ +
Sbjct: 244 KSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQI 303
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
HS+ I G + +VSV L+ Y KC ++AR F+ + + SW+A+I+GY Q G
Sbjct: 304 HSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKF 363
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
D AL +F + + G + + ++ C L G A GL + +A+
Sbjct: 364 DRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAM 423
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
I MYSKCG + A + F A+ + V+WT +I A +G+ EAL LF +M +RPN
Sbjct: 424 ITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNV 483
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VTF+ +L AC+H+G +++G + + MT Y VNP ++HY+CM D+ R G L EAL+ ++
Sbjct: 484 VTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIR 543
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
SMP + D W +LL C RN+EIG A +F L+P +A YV M N+YAL G+WD
Sbjct: 544 SMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDE 603
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
A R MM ++K S + + GK F V D
Sbjct: 604 AAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGD 638
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 206/419 (49%), Gaps = 4/419 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
++ W + I ++ +A+ LF RM I PN F + + A S + IH
Sbjct: 145 LSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHS 204
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ F +DI ++T + +MY KC LD A +KM + + ++VG+ Q
Sbjct: 205 QLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRD 264
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF M G++ D + +A L K +HS+ I +G++++VSV +
Sbjct: 265 ALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVD 324
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC + A F I E SW+++I G KFD +L ++ + G +
Sbjct: 325 FYVKCARFEAARQAFESIHEP--NDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNS 382
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
++ +C L+ G +H+ I G +S + +I+MYSKCG +D A F
Sbjct: 383 FIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLA 442
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ V+WTA+I +A G EALRLF M+ +G P++VT + +++ C SG ++ G
Sbjct: 443 IDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEG 502
Query: 379 KWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
K F D+ G+ + N +ID+YS+ G + +A E+ ++P E V+SW +++ GC
Sbjct: 503 KQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGC 561
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 149/306 (48%), Gaps = 4/306 (1%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVD 97
ALLLF +M +E + F I KACA L D + IH + +K S++ V T +VD
Sbjct: 265 ALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVD 324
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVT 157
Y KC R + A + F+ + + + SW+A+I G+ Q G ++ L +F +R G+ +
Sbjct: 325 FYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFI 384
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
+ QA L +H+ I G+ A +S + I+ Y+KC + A F I+
Sbjct: 385 YNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAID 444
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
+ V+W +II Y K ++L ++ M G RP+V T + LL++C + +G
Sbjct: 445 KP--DTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEG 502
Query: 278 R-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV-SWTAMISGYA 335
+ + S YG + + N +I +YS+ G + A + M V SW +++ G
Sbjct: 503 KQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCW 562
Query: 336 QKGDLD 341
+ +L+
Sbjct: 563 SRRNLE 568
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 272/505 (53%), Gaps = 7/505 (1%)
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM--RLVGIQADFVTVMGLTQAAIHA 168
L P ++N I FA + L LF +M V ++ D T+ L AA
Sbjct: 72 LLSSHPAPTAFTYNVTIRLFAS-SRPDTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAARC 130
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
+L +S H+ IG+ ++ I+ Y+ +D A VF GI R VVSWNS
Sbjct: 131 PAPALARSAHALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISH--RDVVSWNS 188
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++ + R M+ +G P+ T+ +L++C LV GR V
Sbjct: 189 MVKAYERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSA 248
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G ++D + + L+ MY KCG++ AR +FDG+ + V+W AMI+GYAQ G +EA+ LF
Sbjct: 249 GMEVDSLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALF 308
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
+M AG PD +T++ ++S C GAL+LG D YA GL +NV V AL+DMY+KC
Sbjct: 309 HSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALVDMYAKC 368
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAV 466
G + A +F +P K SW +I G A NG +A+ F M E L+P+ +TF+ V
Sbjct: 369 GDLEKATHVFGKMPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQPDDITFIGV 428
Query: 467 LQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKS 526
L AC HAG LE G FN +T V+++ P + HYSC+ DLL R G L+EA DF++ MP K
Sbjct: 429 LSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSCIVDLLARAGHLEEAWDFIEEMPGKV 488
Query: 527 DAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRT 586
DA + G LL AC+ +N E+GE V R+ +LEP ++ YV + IYA + D A +
Sbjct: 489 DAVMLGALLAACRKCKNTEVGERVINRIMKLEPSNSWNYVVSSKIYATSDKMDESARMIG 548
Query: 587 MMKRNQVKKFPGQSLVHINGKTCTF 611
+M+ V K PG S V +NGK F
Sbjct: 549 LMRERGVNKTPGCSWVEVNGKVLEF 573
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 167/367 (45%), Gaps = 37/367 (10%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ WNS ++ + + R M + + PN +T + AC + + + +
Sbjct: 183 VVSWNSMVKAYERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVE 242
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + D + + +V MY KC + A ++FD + +DV +WNAMI G+AQ G
Sbjct: 243 EWVRSAGMEVDSLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSN 302
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + LF++MR G+ D +T++G+ + L L + ++ + G+ +V V +
Sbjct: 303 EAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALV 362
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GFRP 256
YAKC DL+ A VF + + SWN++I G + + D++ + M + G +P
Sbjct: 363 DMYAKCGDLEKATHVFGKMP--FKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQP 420
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T + +LS+C VH+ + YG L N+L ++ I+
Sbjct: 421 DDITFIGVLSAC-----------VHAGLLEYGRQL----FNSLTPVFKIIPRIE------ 459
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
++ ++ A+ G L+EA F E G+V D V + ++++ C + E
Sbjct: 460 ---------HYSCIVDLLARAGHLEEAWD--FIEEMPGKV-DAVMLGALLAACRKCKNTE 507
Query: 377 LGKWFDN 383
+G+ N
Sbjct: 508 VGERVIN 514
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 37/264 (14%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WN+ I +++A+ LF M++ + P+ +T + +CA +
Sbjct: 281 RHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGV 340
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ + ++ +++++V T +VDMYAKC L+ A +F KMP ++ ASWNA+I G A G
Sbjct: 341 ELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLAFNG 400
Query: 135 FLEKVLCLFYNMR-LVGIQADFVTVMGLTQAAIHA-----------------------KH 170
+ F MR G+Q D +T +G+ A +HA +H
Sbjct: 401 RGYDAIQQFELMRDEKGLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEH 460
Query: 171 LSLLKSVHSFGIHIGV----------DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
S + + + H+ D + ++A KC + ++ E V I + L
Sbjct: 461 YSCIVDLLARAGHLEEAWDFIEEMPGKVDAVMLGALLAACRKCKNTEVGERVINRIMK-L 519
Query: 221 RTVVSWNSIIGGCTYG--DKFDDS 242
SWN ++ Y DK D+S
Sbjct: 520 EPSNSWNYVVSSKIYATSDKMDES 543
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 309/611 (50%), Gaps = 19/611 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + +WN+ I ++ +A+ +F M ++ +TF + AC+KL D ++
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK 221
Query: 75 MI--------HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
++ H H+ S F T +V+ Y C L+ A++ F + ++ AM
Sbjct: 222 LVKLCVEEREHDHLHDSSF------ATALVNFYGSCGDLEQAFRAFSRHR-LELILATAM 274
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I + Q ++ L LF M L G++ D + M + A + L + +H F I
Sbjct: 275 ITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRF 334
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D V+ N I+ Y KC L+ A VFR ++ R V+SWN+II + ++L+
Sbjct: 335 DRHVNAGNALINMYGKCGSLEEAVEVFRSMQH--RDVISWNTIIAAHGQHSQHPEALHLL 392
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M DG + D + V+ L C EAL +GR++HS + G DV + N ++ MY C
Sbjct: 393 HLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSC 452
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPDLVTVLSM 365
D A +F M R +VSW AMI+ YA + L EAL LF M+ G +PD+++ ++
Sbjct: 453 KSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAA 512
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+S C +L GK + GL+ N+ V NA+++MY+K GS+ AR++F +P V
Sbjct: 513 LSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDV 572
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYF-N 484
+SW MI+ A +G + L F +M PN VTF++V+ AC+H G ++ G F +
Sbjct: 573 ISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVS 632
Query: 485 LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNI 544
L+ ++P HY CM DL+ R GKL A F+ + P+K D I T+L A K+H+++
Sbjct: 633 LLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDV 692
Query: 545 EIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHI 604
E A L EL P +A YV ++N+Y G+ D A +R +M ++K P S + +
Sbjct: 693 ERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAV 752
Query: 605 NGKTCTFTVED 615
+ F D
Sbjct: 753 KRRVHEFFTGD 763
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 252/526 (47%), Gaps = 13/526 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS-QMIHGHI 80
W IR ++ +AL LFR M+ + P N F + AC+ + L + IHG +
Sbjct: 67 WARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVL 126
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ SD +V TT++ MY KC ++ A K+FD + + V WNAMI +AQ E+ +
Sbjct: 127 RGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAI 186
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA--DVSVCNTWIS 198
+FY M L G++A+ +T +G+ A K L + K V D D S ++
Sbjct: 187 QVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVN 246
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y C DL+ A FR ++ ++I T +++D++L ++ M+ +G + D
Sbjct: 247 FYGSCGDLEQA---FRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+++L++C P L +GR++H FD V+ N LI+MY KCG ++ A +F
Sbjct: 304 IACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRS 363
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M R +SW +I+ + Q EAL L M+ G D ++ ++ + C S AL G
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKG 423
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ ++ G+K +VM+ NA++DMY C S DA +F A+ + VSW MI A
Sbjct: 424 RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQ 483
Query: 439 GEF-VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
EAL LF QM P+ ++F+A L AC L +G L ++ + E N
Sbjct: 484 PRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK---LLHDRIRETGLESN 540
Query: 498 HYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
A ++ + G L A MP+ D W ++ A H
Sbjct: 541 MTVANAVLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQH 585
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 204/419 (48%), Gaps = 30/419 (7%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H I KS F+ +V MY C L A FD+MP +D +W +I Q+G
Sbjct: 20 VHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGD 79
Query: 136 LEKVLCLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
E+ L LF +M+L G + +FV V+G A + L + +H +++D V
Sbjct: 80 SEQALHLFRSMQLEGVAPVNRNFVAVLGACSA--DPELLEEGRRIHGVLRGTAMESDHYV 137
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
T + Y KC+ ++ A VF GI + VV WN++I D + ++ + M+ +
Sbjct: 138 STTLLHMYGKCSSVEDARKVFDGIRH--KRVVEWNAMITAYAQQDHHEQAIQVFYAMLLE 195
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLV--------HSHGIHYGFDLDVSVINTLISMYS 304
G + + T + +L +C + L +LV H H +H D S L++ Y
Sbjct: 196 GVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDH-LH-----DSSFATALVNFYG 249
Query: 305 KCGDIDSARFLFDGMCDRTRVSW---TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
CGD++ A F R R+ TAMI+ Y Q+ DEAL LF M G D +
Sbjct: 250 SCGDLEQAFRAF----SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIA 305
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++++ C LE G+ + +V NALI+MY KCGS+ +A E+F ++
Sbjct: 306 CMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQ 365
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKG 479
+ V+SW T+IA + + EAL L H +M+LD ++ ++++F+ L C + L KG
Sbjct: 366 HRDVISWNTIIAAHGQHSQHPEALHLLH-LMQLDGVKADKISFVNALPLCAASEALAKG 423
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
LL +L G+ VH+ D + + L+ MY CG + A+ FD M +
Sbjct: 4 LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA-LELGKWFD 382
++W +I + Q GD ++AL LF +M+ G P ++++ C LE G+
Sbjct: 64 ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
++ + V L+ MY KC S+ DAR++F + K VV W MI A
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+A+ +F+ M+ ++ R+TF+ VL AC+ LE
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLE 218
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 298/609 (48%), Gaps = 22/609 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+I W I V + + A+ LF R+ + I + + F + AC+ ++IH
Sbjct: 92 SIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIH 151
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQMGFL 136
V++ V + +V MY +C L A LF + DV WNAMI +Q G
Sbjct: 152 RCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSP 211
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCN 194
+ L +FY M +GI D VT + + +A + L S +K H+ G+ +DV V
Sbjct: 212 REALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVAT 271
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
++AYA+C ++ A F + E R VSW S+I T ++ + M+ +G
Sbjct: 272 ALVNAYARCGEIDCARKFFAEMPE--RNAVSWTSMIAAFTQIGHLL-AVETFHAMLLEGV 328
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P +T+ + L C E L RLV + G DV+++ L+ Y++C + A
Sbjct: 329 VPTRSTLFAALEGC---EDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIR 385
Query: 315 LFDGMCDRTRVSW-----TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+F R W TAMI+ YAQ D +L+ A G PD + ++ + C
Sbjct: 386 VFSA---REEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDAC 442
Query: 370 GQSGALELGKWFDNYACSGG---LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
AL G+ +AC L +V + NA++ MY +CGS+ DAR+ F +P + +
Sbjct: 443 ASLAALSEGRQI--HACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEI 500
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW M++ A +G + DLF M++ R+ FL +L AC HAG ++ G +F+ M
Sbjct: 501 SWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAM 560
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
T + V P HY CM DLLGRKG+L +A VQ+MP+ DA W L+ AC+I+ + E
Sbjct: 561 TGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTER 620
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
G + A R+ EL A YV + NIY+ GRWD A +R +M ++K PG S + I
Sbjct: 621 GRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRS 680
Query: 607 KTCTFTVED 615
K F V D
Sbjct: 681 KVHEFVVRD 689
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 211/465 (45%), Gaps = 16/465 (3%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D ++ +++V MY +C L+ A +F K+ + + W +I + G + LF+ +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
GI D + + + A + L+ + +H + G+ V + +S Y +C L+
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A +F +E L VV WN++I + ++L + M+ G PD+ T VS+ +
Sbjct: 181 DANALFGHLERHL-DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239
Query: 268 CVCPEALVQGRLVHSHGI--HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
C +L ++ H G DV V L++ Y++CG+ID AR F M +R V
Sbjct: 240 CSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAV 299
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYA 385
SWT+MI+ + Q G L A+ F AM G VP T+ + + GC L + + + A
Sbjct: 300 SWTSMIAAFTQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCED---LRVARLVEAIA 355
Query: 386 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW-----TTMIAGCALNGE 440
G+ +V + L+ Y++C DA +F A E W T MIA A +
Sbjct: 356 QEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEG---EWDAALVTAMIAVYAQCRD 412
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
L+ +E + P+R+ ++ L AC L +G + +++ ++ +
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
+ + G+ G L++A D MP + + W +L A H +E
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 147/314 (46%), Gaps = 36/314 (11%)
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFL 315
D V L+ C ++ +G+L+HS D + ++L+ MY +CG ++SA +
Sbjct: 28 DSAAAVRLVREC---NSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDV 84
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + ++ V WT +IS Y +G A+ LF + G D + +S++S C L
Sbjct: 85 FHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFL 144
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAG 434
G+ A GL +V +AL+ MY +CGS+ DA LF L VV W MI
Sbjct: 145 AAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITA 204
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-------------HAGFLEKGWG 481
+ NG EAL++F++M++L + P+ VTF++V +AC+ HA E G G
Sbjct: 205 NSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLG 264
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ V +N Y+ R G++ A F MP + +A W +++ A
Sbjct: 265 -----SDVVVATALVNAYA-------RCGEIDCARKFFAEMP-ERNAVSWTSMIAA---- 307
Query: 542 RNIEIGEYVAYRLF 555
+IG +A F
Sbjct: 308 -FTQIGHLLAVETF 320
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 298/597 (49%), Gaps = 12/597 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFI--AKACAKLSDFLYSQMIHG 78
W +R A+ LFR M ++ + P+++T + C +H
Sbjct: 105 WTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGCD-------VGTLHP 157
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+ K F + + V T++D Y K + A ++F +MP RD ++NAMI+G ++ G +
Sbjct: 158 VVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGE 217
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L LF MR G+ T L A L L + +H + +V V N +
Sbjct: 218 ALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLD 277
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC+ L + +F + E R VS+N +I C++ +L +R M GF
Sbjct: 278 FYSKCDSLGDLKQLFDEMSE--RDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRT 335
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
SLLS + GR +H+ I +G L+ V N LI MYSKCG +D+A+ +F
Sbjct: 336 LPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAY 395
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
D+T +SWTA+I+G Q G +EAL+LF M AG PD T S++ + +G
Sbjct: 396 KSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIG 455
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ Y G +V +AL+DMY+KCG + +A F +PEK ++W +I+ A
Sbjct: 456 RQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQY 515
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+ A+ +F M+ L P+ VTFL+VL AC H G E+ YF+LM Y ++P H
Sbjct: 516 GQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKEH 575
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
YSC+ D LGR G + + MP + D IW ++L +C+I+ N ++ A +LF +
Sbjct: 576 YSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMV 635
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P A YV ++NIYA G W+G A ++ +M+ VKK G S V I K F+ D
Sbjct: 636 PTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQKIYMFSSND 692
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 14 YRS-STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
Y+S T W + I V + +AL LF M++ + P+ T I K+ + L+
Sbjct: 395 YKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGI 454
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H ++ KS +F + ++DMYAKC LD A + F++MP+++ +WNA+I +AQ
Sbjct: 455 GRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQ 514
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
G + + +F +M G+ D VT + + A H
Sbjct: 515 YGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGH 549
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSM--ISGCGQSGALELG 378
R +WT M+ G +A+ LF M GE PD VT+ ++ + GC G L
Sbjct: 100 RNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGC-DVGTLH-- 156
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
G +V+VCN L+D Y K G I AR +F +P + +++ MI GC+
Sbjct: 157 ----PVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQ 212
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQV 492
G EAL+LF M + + TF ++L T L G L + V+
Sbjct: 213 GRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVN 272
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
N L+ YS L G LK+ D + + D + ++ AC +R
Sbjct: 273 NALLDFYSKCDSL----GDLKQLFDEMS----ERDNVSYNVMISACSWNR 314
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/576 (31%), Positives = 302/576 (52%), Gaps = 34/576 (5%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVD---MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
++IH ++K+ + + + +++ + D L A +FD + + + WN M G
Sbjct: 19 RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
A L L+ M +G+ + T L ++ + + +H + G D D+
Sbjct: 79 ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138
Query: 191 SVCNTWISAYAKCNDLKMAELVF--------------------RGIEEG---------LR 221
+ + IS Y + L+ A+ V RG E ++
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VVSWN+ I G + ++L ++ M+ RPD +T+V++LS+C ++ GR VH
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
S +GF ++ ++N LI +YSKCG++++A LF G+ ++ +SW +I GY
Sbjct: 259 SWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYK 318
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNA 399
EAL LF M +GE P+ VT+LS++S C GA+++G+W Y G+ + + +
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPN 459
LIDMY+KCG I A+++F ++ +++ SW MI G A++G A D+F +M + + P+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
+TF+ +L AC+H+G L+ G F MT+ Y++ P+L HY CM DL G G KEA +
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMI 498
Query: 520 QSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWD 579
+M ++ D IW +LL ACK+H N+E+GE A L ++EP + YV ++NIYA RW+
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWN 558
Query: 580 GVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA R ++ +KK PG S + I+ F + D
Sbjct: 559 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 233/453 (51%), Gaps = 37/453 (8%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ R ++ AL L+ M + PN+ TFPF+ K+CAK F Q +HG ++
Sbjct: 71 WNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVL 130
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRL-------------------------------DCAYK 110
K F D+++ T+++ MY + RL + A+K
Sbjct: 131 KFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHK 190
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
+FD++P +DV SWNA I G+A+ G ++ L LF M ++ D T++ + A +
Sbjct: 191 MFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGS 250
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ L + VHS+ G ++ + N I Y+KC +L+ A +F+G+ + V+SWN++I
Sbjct: 251 IELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSN--KDVISWNTLI 308
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH--GIHYG 288
GG T+ + + ++L ++ M+ G +P+ T++S+LS+C A+ GR +H + G
Sbjct: 309 GGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKG 368
Query: 289 FDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFF 348
S+ +LI MY+KCGDI++A+ +FD M +R+ SW AMI G+A G + A +F
Sbjct: 369 VTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFS 428
Query: 349 AMEAAGEVPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD +T + ++S C SG L+LG+ F + L + +ID+
Sbjct: 429 RMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHS 488
Query: 408 GSIGDARELFYALP-EKTVVSWTTMIAGCALNG 439
G +A ++ + E V W +++ C ++G
Sbjct: 489 GLFKEAEKMINTMEMEPDGVIWCSLLKACKMHG 521
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 47/367 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + +AL LF++M K ++ P+ T + ACA+ + +H I
Sbjct: 203 WNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIN 262
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
F ++ + ++D+Y+KC L+ A LF + ++DV SWN +I G+ M ++ L
Sbjct: 263 DHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALL 322
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF--GIHIGVDADVSVCNTWISA 199
LF +M G + + VT++ + A H + + + +H + GV S+ + I
Sbjct: 323 LFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 382
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC D++ A+ VF + R++ SWN++I G + + + + + M +G PD
Sbjct: 383 YAKCGDIEAAQQVFDSMLN--RSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T V LLS+C S G +D R +F M
Sbjct: 441 TFVGLLSAC-----------------------------------SHSGMLDLGRHIFRSM 465
Query: 320 CDRTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
++ + MI G EA ++ ME PD V S++ C G
Sbjct: 466 TRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEME---PDGVIWCSLLKACKMHGN 522
Query: 375 LELGKWF 381
+ELG+ +
Sbjct: 523 VELGESY 529
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 39/308 (12%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF---LFDG 318
+SLL C ++L R++H+ I G ++ L+ D + +FD
Sbjct: 6 LSLLHXCKTLQSL---RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDT 62
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + + W M G+A D AL+L+ M + G +P+ T ++ C +S A + G
Sbjct: 63 IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM------- 431
+ G ++ + +LI MY + G + DA+++ + VVS+T +
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182
Query: 432 ------------------------IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
I+G A G + EAL+LF +MM+ ++RP+ T + VL
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC +G +E G + + + L + + DL + G+L+ A Q + K D
Sbjct: 243 SACAQSGSIELGRQVHSWIND-HGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK-D 300
Query: 528 AGIWGTLL 535
W TL+
Sbjct: 301 VISWNTLI 308
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
+++ WN+ I A+ A +F RM+KN IEP+++TF + AC+
Sbjct: 403 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS 450
>gi|15230248|ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial; Flags: Precursor
gi|9293988|dbj|BAB01891.1| unnamed protein product [Arabidopsis thaliana]
gi|332643452|gb|AEE76973.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 601
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 287/522 (54%), Gaps = 6/522 (1%)
Query: 97 DMYAKCDRL---DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
D+ A C R+ A K+FD++P R V+ +N+MIV +++ ++VL L+ M IQ
Sbjct: 55 DLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 154 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
D T +A + L ++V + G DV VC++ ++ Y KC + AE++F
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
+ + R V+ W +++ G K ++ FYR M +GF D ++ LL +
Sbjct: 175 GKMAK--RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGD 232
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
GR VH + G ++V V +L+ MY+K G I+ A +F M +T VSW ++ISG
Sbjct: 233 TKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISG 292
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
+AQ G ++A M++ G PDLVT++ ++ C Q G+L+ G+ Y + D
Sbjct: 293 FAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR 352
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V AL+DMYSKCG++ +RE+F + K +V W TMI+ ++G E + LF +M E
Sbjct: 353 V-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
++ P+ TF ++L A +H+G +E+G +F++M Y++ P HY C+ DLL R G+++
Sbjct: 412 SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVE 471
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYA 573
EALD + S + + IW LL C HRN+ +G+ A ++ +L P S ++N +A
Sbjct: 472 EALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFA 531
Query: 574 LGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+W VA +R +M+ ++K PG S + +NG+ TF +ED
Sbjct: 532 TANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMED 573
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 204/423 (48%), Gaps = 13/423 (3%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
++ +NS I + L L+ +M I+P++ TF KAC + +
Sbjct: 81 VSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWC 140
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
V + +D+FV ++++++Y KC ++D A LF KM RDV W M+ GFAQ G K
Sbjct: 141 KAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLK 200
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ + M+ G D V ++GL QA+ + +SVH + G+ +V V + +
Sbjct: 201 AVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVD 260
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAK +++A VF + +T VSW S+I G + + M GF+PD+
Sbjct: 261 MYAKVGFIEVASRVFSRMM--FKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDL 318
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+V +L +C +L GRLVH + I LD L+ MYSKCG + S+R +F+
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCY-ILKRHVLDRVTATALMDMYSKCGALSSSREIFEH 377
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + V W MIS Y G+ E + LF M + PD T S++S SG +E G
Sbjct: 378 VGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQG 437
Query: 379 K-WF----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMI 432
+ WF + Y K V LID+ ++ G + +A ++ + + + W ++
Sbjct: 438 QHWFSVMINKYKIQPSEKHYV----CLIDLLARAGRVEEALDMINSEKLDNALPIWVALL 493
Query: 433 AGC 435
+GC
Sbjct: 494 SGC 496
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 7/259 (2%)
Query: 280 VHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H+ I G L+ S I+ LI+ + G+I AR +FD + R + +MI Y++
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ DE LRL+ M A PD T I C LE G+ A G K++V VC+
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCS 155
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+++++Y KCG + +A LF + ++ V+ WTTM+ G A G+ ++A++ + +M
Sbjct: 156 SVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR 215
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEAL 516
+RV L +LQA G + G + Y+ +N + + D+ + G ++ A
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYL---YRTGLPMNVVVETSLVDMYAKVGFIEVAS 272
Query: 517 DFVQSMPIKSDAGIWGTLL 535
M K+ A WG+L+
Sbjct: 273 RVFSRMMFKT-AVSWGSLI 290
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T W S I A+KA M+ +P+ +T + AC+++ +++H
Sbjct: 282 TAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVH 341
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+I+K D T ++DMY+KC L + ++F+ + +D+ WN MI + G +
Sbjct: 342 CYILKRHVL-DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQ 400
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+V+ LF M I+ D T L A H+
Sbjct: 401 EVVSLFLKMTESNIEPDHATFASLLSALSHS 431
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 291/594 (48%), Gaps = 57/594 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + E L F M + D+ NL + S + + + I
Sbjct: 174 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPN--- 230
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ TM+ +A+ ++ A +LFD+MP R+V +WNAMI + Q +++ +
Sbjct: 231 -----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAIS 285
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M + + ++ + + L + + + + V A ++ IS Y
Sbjct: 286 LFMEMP----EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAM----ISGYV 337
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ + A +F I +R VV WN++I G + + D++L+ ++ M+
Sbjct: 338 QNKRMDDARQIFNQI--SIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKK--------- 386
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
D+ NT+++ Y++ G +D+A +F+ M +
Sbjct: 387 ------------------------------DIVSWNTMVASYAQVGQMDAAIKIFEEMKE 416
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VSW ++ISG Q G +AL+ F M G+ PD T +S C AL++GK
Sbjct: 417 KNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQL 476
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
G ++ V NALI MY+KCGSI A LF + VVSW ++IA ALNG
Sbjct: 477 HQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNG 536
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
EAL LFH+M + P+ VTF+ +L AC+H G +++G F M + Y + P HY+C
Sbjct: 537 REALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYAC 596
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G+L+EA V+ M I ++AGIWG LL AC+IH N+E+ ++ A +L E EPH
Sbjct: 597 MVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHK 656
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV ++N+ A GRWD VA +R +MK +K PG S + + + F ED
Sbjct: 657 TSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSED 710
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 197/459 (42%), Gaps = 79/459 (17%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
+ +M+ +AK R+ A +LFD MP R++ SWN+MI + +E+ LF M
Sbjct: 45 NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMP 104
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
+ + + + T+ L K+ + F + + + CN ++ YAK
Sbjct: 105 TRDLYSWTLMITCYTRNG------ELAKARNLFNL-LPYKWNPVCCNAMVAGYAKNRQFD 157
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM----------IYDGF--- 254
A +F + + +VSWNS++ G T + L F+ M + DGF
Sbjct: 158 EARRLFDAMPA--KDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEV 215
Query: 255 --------------RPDVTTVVSLLSSCVCPEALVQGR----------------LVHSHG 284
P+ + V++L + + R ++ ++
Sbjct: 216 GDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYV 275
Query: 285 IHYGFDLDVSVI-----------NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
+ D +S+ T+I+ Y + G +D AR L + M R + TAMISG
Sbjct: 276 QNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISG 335
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG----ALELGKWFDNYACSGG 389
Y Q +D+A ++F + + D+V +MI+G Q G AL L K
Sbjct: 336 YVQNKRMDDARQIFNQI----SIRDVVCWNTMIAGYSQCGRMDEALHLFKQM-------- 383
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+K +++ N ++ Y++ G + A ++F + EK +VSW ++I+G NG +++AL F
Sbjct: 384 VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFM 443
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
M +P++ TF L +C H L+ G L+ K
Sbjct: 444 LMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMK 482
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 20/297 (6%)
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
N++IS ++K G I AR LFDGM R VSW +MI+ Y ++EA +LF M
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMP----T 105
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
DL + MI+ ++G L + N K N + CNA++ Y+K +AR L
Sbjct: 106 RDLYSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRL 162
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F A+P K +VSW +M+ G NGE L F +M E D+ V++ ++ G L
Sbjct: 163 FDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDV----VSWNLMVDGFVEVGDL 218
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
W +F + NP + M R GK+ EA MPI++ W ++
Sbjct: 219 NSSWEFFEKIP-----NPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVA-WNAMIA 272
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
A +N + E ++ E+ ++ + + N Y G+ D L M V
Sbjct: 273 AYV--QNCHVDEAISL-FMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNV 326
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ I WNS I AL F M +P+ TF +CA L+ +
Sbjct: 415 KEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGK 474
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H ++KS + +D+FV ++ MYAKC + A LF + DV SWN++I +A G
Sbjct: 475 QLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNG 534
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKS-VHSFGIHIGVDAD 189
+ L LF+ M + G+ D VT +G+ A H + L L K V ++ I A+
Sbjct: 535 NGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIE--PLAE 592
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
C + + L+ A + RG++ + W +++G C + + F
Sbjct: 593 HYAC--MVDLLGRAGRLEEAFQLVRGMKINANAGI-WGALLGACRIHGNLELA-KFAAEK 648
Query: 250 IYDGFRPDVTTVVSLLSS 267
+ + F P T+ LLS+
Sbjct: 649 LLE-FEPHKTSNYVLLSN 665
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
N + N++I ++K G I DAR+LF +P++ +VSW +MIA N EA LF +M
Sbjct: 45 NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMP 104
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG--RKG 510
DL ++ ++ T G L K FNL+ Y+ NP C A + G +
Sbjct: 105 TRDL----YSWTLMITCYTRNGELAKARNLFNLLP--YKWNP----VCCNAMVAGYAKNR 154
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ EA +MP K D W ++L + + +G
Sbjct: 155 QFDEARRLFDAMPAK-DLVSWNSMLTGYTRNGEMRLG 190
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 300/584 (51%), Gaps = 13/584 (2%)
Query: 26 IREAVDKNEAHKALLLFRRMKKN--------DIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ + ++ N+ K L R +K+ ++ + F+ + C SD + IH
Sbjct: 180 LNDEIEANDGAKQLPSLRISRKSFVSKSENSSVKLEDFYVSFLQR-CVLTSDSRHGSAIH 238
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+K +F +++ Y KC RL +LFD+MP+R+V SW+A+I GF Q G
Sbjct: 239 AKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPN 298
Query: 138 KVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L LF M G I + T++ A + L +++F + +G ++V + N +
Sbjct: 299 EALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAF 358
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++A + L A VF + VSWN+++ G F+ F+R M + +P
Sbjct: 359 LTALIRHEKLLEALEVFESCLS--KDTVSWNAMMAGYLQLAYFELP-KFWRRMNLESVKP 415
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T S+L+ G VH + G+ D+ V N+L MY K + F
Sbjct: 416 DNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAF 475
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M SWT M +G Q G+ +AL++ + M+ G + T+ + ++ C ++E
Sbjct: 476 DEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIE 535
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK F G +V V NAL+DMY+KCG + A +F ++ E++VVSWTTMI G A
Sbjct: 536 EGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFA 595
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
NG+ EAL +F +M + + PN +TF+ VL AC+ GF+++ W YF+ M+ + + P
Sbjct: 596 HNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSE 655
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+HY CM +LLGR G +KEA D + MP + + +W TLL AC +H +IE G+ A
Sbjct: 656 DHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALN 715
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
L+ + + Y+ ++N++A G WD V LR +M+ VKK PG S
Sbjct: 716 LDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKKVPGSS 759
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 15/230 (6%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
SS + W + E KAL + MK + N T +CA L+ +
Sbjct: 480 SSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKK 539
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
HG +K D+ V ++DMYAKC + A +F M +R V SW MI+GFA G
Sbjct: 540 FHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQ 599
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDA 188
++ L +F MR + + +T + + A K+ S + + H I
Sbjct: 600 TKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG----IAPSE 655
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC-TYGD 237
D VC + A C +K AE + + ++V W +++G C +GD
Sbjct: 656 DHYVCMVNLLGRAGC--IKEAEDLILQMPFQPGSLV-WQTLLGACLVHGD 702
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 281/543 (51%), Gaps = 34/543 (6%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
L A+ +F+++ + WN MI G+ F M + ++ D + + +A
Sbjct: 207 LHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKA 266
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ + +SV+ +G D ++ V N I YA+ LK A VF E + VV
Sbjct: 267 CQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFD--ESSDKDVV 324
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
+W ++I G D ++++ + M+ P+ T+++++S+C L G+ VH
Sbjct: 325 TWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV 384
Query: 285 IHYGFDLDVSVINTLISMY-------------------------------SKCGDIDSAR 313
+S+ N L+ MY +KCGD++SAR
Sbjct: 385 EEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESAR 444
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
FD + V W+AMI+GY+Q E+L+LF M G VP T++S++S CGQ
Sbjct: 445 RFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLT 504
Query: 374 ALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L LG W Y G + +V + NA++DMY+KCGSI A E+F +PE+ ++SW TMI
Sbjct: 505 CLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMI 564
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
AG A NG +A+++F QM + PN +TF+++L AC+H G + +G YF+ M + Y +
Sbjct: 565 AGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGI 624
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
PE HY+CM DLLGR G L+EA + +MP++ WG LL AC++H N+E+ A+
Sbjct: 625 KPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAH 684
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
L L+P + YV +AN A +W V +R++MK VKK PG SL+ I+G F
Sbjct: 685 NLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFL 744
Query: 613 VED 615
V D
Sbjct: 745 VAD 747
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 226/480 (47%), Gaps = 37/480 (7%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
N++ + +T WN+ IR + + A F M + +E ++ +F F KAC +
Sbjct: 214 FNRVEQPNTF-MWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFET 272
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ ++ + K F ++ V+ ++ YA+ L A ++FD+ D+DV +W MI G
Sbjct: 273 VFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDG 332
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH----------S 179
+A E+ + +F M L ++ + VT++ + A +L + K VH S
Sbjct: 333 YAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCS 392
Query: 180 FGIHIG-----------VDA----------DVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+H VDA DV + ++ YAKC DL+ A F +
Sbjct: 393 LSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFD--QT 450
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
+ V W+++I G + +K +SL + M+ G P T+VS+LS+C L G
Sbjct: 451 PRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGD 510
Query: 279 LVHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
+H + + L V++ N ++ MY+KCG ID+A +F M +R +SW MI+GYA
Sbjct: 511 WIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAAN 570
Query: 338 GDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMV 396
G +A+ +F M G P+ +T +S+++ C G + G+ +FDN G+K
Sbjct: 571 GRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGH 630
Query: 397 CNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
++D+ + G + +A +L +P + +W ++ C ++G A H ++ LD
Sbjct: 631 YACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLD 690
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 175/371 (47%), Gaps = 40/371 (10%)
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
A A DL A +F +E+ WN++I G K + +F+ +M D
Sbjct: 200 ALAHSGDLHYAHTIFNRVEQP--NTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDS 257
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+ V L +C E + +G V+ GFD ++ V N LI Y++ G + +AR +FD
Sbjct: 258 RSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDE 317
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
D+ V+WT MI GYA +EA+ +F M + P+ VT+++++S C G LE+G
Sbjct: 318 SSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMG 377
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-----------------YA-- 419
K ++ ++ + NAL+DMY KC + DARELF YA
Sbjct: 378 KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKC 437
Query: 420 ------------LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
P K V W+ MIAG + N + E+L LFH+MME + P T ++VL
Sbjct: 438 GDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVL 497
Query: 468 QACTHAGFLEKG-W--GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
AC L G W YF ++ K+ ++ L + + D+ + G + A + +MP
Sbjct: 498 SACGQLTCLNLGDWIHQYF-VVGKIIPLSVTLE--NAIVDMYAKCGSIDAATEVFSTMPE 554
Query: 525 KSDAGIWGTLL 535
++ W T++
Sbjct: 555 RNLIS-WNTMI 564
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/426 (39%), Positives = 238/426 (55%), Gaps = 32/426 (7%)
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC-VCPEALVQGRLV 280
T V+WN++I G G +F +S + M G P T VS+LS+C ++ G V
Sbjct: 86 TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQV 145
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGD-------------------------------I 309
H + G D+ V N L+ MY++C D +
Sbjct: 146 HGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQV 205
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
D AR LFD M +R VSWTAMI GY EAL +F M+ + D T++S+I+ C
Sbjct: 206 DEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITAC 265
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q GALE+G+W Y G+K + V NALIDMYSKCGSI A ++F + + +WT
Sbjct: 266 AQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWT 325
Query: 430 TMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I G A+NG EA+++FH+M+ + P+ VTF+ VL ACTHAG ++KG +F M +
Sbjct: 326 AIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEA 385
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
Y + P + HY C+ DLLGR GK+ EALD + MP+ ++ IWGTLL AC++H N EIGE
Sbjct: 386 YNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGEL 445
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTC 609
VA RL EL+P ++ Y+ ++NIYA RW+ V LR + +KK PG SL+ ++G
Sbjct: 446 VAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIH 505
Query: 610 TFTVED 615
F D
Sbjct: 506 EFVAGD 511
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 207/463 (44%), Gaps = 38/463 (8%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLS----DFLYSQMIHGHIVKSPFWSDIFVQT 93
A+ + RM P+ TFP + KA A+ + ++ +H H+V+ + V +
Sbjct: 3 AVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVAS 62
Query: 94 TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQA 153
++V Y A L + D VA WNA+I G + G + F +M G
Sbjct: 63 SLVAAYTAGGDGAAARALVGEC-DTPVA-WNALISGHNRGGRFGESCGSFVDMARAGAAP 120
Query: 154 DFVTVMGLTQAAIHAKHLSLLK-SVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
VT + + A LL VH + GV D+ V N + YA+C D+ A V
Sbjct: 121 TPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKV 180
Query: 213 FRGIE-----------EGL------------------RTVVSWNSIIGGCTYGDKFDDSL 243
F G++ GL R VSW ++I G + +F ++L
Sbjct: 181 FDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREAL 240
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 303
+R M Y D T+VS++++C AL G V + G +D V N LI MY
Sbjct: 241 EMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMY 300
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
SKCG I+ A +F GM R + +WTA+I G A G +EA+ +F M E PD VT +
Sbjct: 301 SKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFI 360
Query: 364 SMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP- 421
+++ C +G ++ G+ +F + + + NV+ +ID+ + G I +A + +P
Sbjct: 361 GVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPM 420
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
W T++A C ++G + +++ELD + V L
Sbjct: 421 TPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYIL 463
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 165/416 (39%), Gaps = 68/416 (16%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAK-LSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
F M + P +T+ + AC K D L +HG +V S D+ V+ +VDMYA
Sbjct: 110 FVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYA 169
Query: 101 KCDRLDCAYK-------------------------------LFDKMPDRDVASWNAMIVG 129
+C + A+K LFD+MP+RD SW AMI G
Sbjct: 170 ECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDG 229
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+ + L +F M+ + AD T++ + A L + + V + G+ D
Sbjct: 230 YVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMD 289
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V N I Y+KC ++ A VF+G+ R +W +II G ++++ + M
Sbjct: 290 AFVGNALIDMYSKCGSIERALDVFKGMHH--RDKFTWTAIILGLAVNGYEEEAIEMFHRM 347
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
I PD T + +L++C + +GR ++I Y+ ++
Sbjct: 348 IRVSETPDEVTFIGVLTACTHAGLVDKGR---------------EFFLSMIEAYNIAPNV 392
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
V + +I + G + EAL M P+ ++++ C
Sbjct: 393 ---------------VHYGCIIDLLGRAGKITEALDTIDQMPM---TPNSTIWGTLLAAC 434
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
G E+G+ +N MV L ++Y+KC D R L +A+ EK +
Sbjct: 435 RVHGNSEIGELVAERLLELD-PENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGI 489
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W + I V +AL +FR M+ +++ + T + ACA+L + + ++
Sbjct: 222 SWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYM 281
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+ D FV ++DMY+KC ++ A +F M RD +W A+I+G A G+ E+ +
Sbjct: 282 SRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAI 341
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+F+ M V D VT +G+ A HA
Sbjct: 342 EMFHRMIRVSETPDEVTFIGVLTACTHA 369
>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 186/598 (31%), Positives = 306/598 (51%), Gaps = 6/598 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W + I +A L M+ I+P +T + +++ Q
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---Q 164
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H V F DI V +M+++Y KCD + A LFD+M RD+ SWN MI G+A +G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ ++L L Y MR G++ D T + L + + +H + G D D+ +
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
I+ Y KC + + V I + VV W +I G + + +L + M+ G
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPN--KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS 342
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
+ S+++SC + G VH + + +G+ LD +N+LI+MY+KCG +D +
Sbjct: 343 DLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLV 402
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSG 373
+F+ M +R VSW A+ISGYAQ DL +AL LF M+ + D TV+S++ C +G
Sbjct: 403 IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG 462
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
AL +GK ++ +V AL+DMYSKCG + A+ F ++ K VVSW +IA
Sbjct: 463 ALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIA 522
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G +G+ AL+++ + + + PN V FLAVL +C+H G +++G F+ M + + V
Sbjct: 523 GYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P H +C+ DLL R ++++A F + + + G +L AC+ + E+ + +
Sbjct: 583 PNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICED 642
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+ EL+P A YV++ + +A RWD V+ M+ +KK PG S + +NGKT TF
Sbjct: 643 MIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTF 700
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 163/554 (29%), Positives = 280/554 (50%), Gaps = 13/554 (2%)
Query: 13 IYRSSTINQ---WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
I SS +N +NS I + + L F M N + P+ TFP + KACA L
Sbjct: 2 IRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR 61
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ IH ++ + F SD ++ +++V++YAK L A K+F++M +RDV W AMI
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGC 121
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
+++ G + + L MR GI+ VT++ + + ++ L+ +H F + G D D
Sbjct: 122 YSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVL---EITQLQCLHDFAVIYGFDCD 178
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
++V N+ ++ Y KC+ + A+ +F +E+ R +VSWN++I G + L M
Sbjct: 179 IAVMNSMLNLYCKCDHVGDAKDLFDQMEQ--RDMVSWNTMISGYASVGNMSEILKLLYRM 236
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 309
DG RPD T + LS L GR++H + GFD+D+ + LI+MY KCG
Sbjct: 237 RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKE 296
Query: 310 DSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC 369
+++ + + + ++ V WT MISG + G ++AL +F M +G + S+++ C
Sbjct: 297 EASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q G+ +LG Y G + N+LI MY+KCG + + +F + E+ +VSW
Sbjct: 357 AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWN 416
Query: 430 TMIAGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+I+G A N + +AL LF +M + + + T +++LQAC+ AG L G ++ +
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIR 476
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH--RNIEI 546
+ + P + + D+ + G L+ A S+ K D WG L+ H +I +
Sbjct: 477 SF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIAL 534
Query: 547 GEYVAYRLFELEPH 560
Y + +EP+
Sbjct: 535 EIYSEFLHSGMEPN 548
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 293/541 (54%), Gaps = 3/541 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H ++ K +D FV T ++D Y+ C +D A ++FD + +D+ SW M+ +A+
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYC 185
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E L LF MR++G + + T+ ++ + + KSVH + + D D+ V
Sbjct: 186 HEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIA 245
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y K ++ A+ F + + ++ W+ +I DK ++L + M
Sbjct: 246 LLELYTKSGEIAEAQQFFEEMPKD--DLIPWSLMISRYAQSDKSKEALELFCRMRQSSVV 303
Query: 256 -PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
P+ T S+L +C L G +HS + G D +V V N L+ +Y+KCG+I+++
Sbjct: 304 VPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVK 363
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
LF G ++ V+W +I GY Q GD ++AL LF M P VT S++ A
Sbjct: 364 LFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVA 423
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LE G+ + + +V N+LIDMY+KCG I DAR F + ++ VSW +I G
Sbjct: 424 LEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICG 483
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
+++G +EAL+LF M + + +PN++TF+ VL AC++AG L+KG +F M + Y + P
Sbjct: 484 YSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEP 543
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HY+CM LLGR G+ EA+ + +P + +W LL AC IH+N+++G+ A R+
Sbjct: 544 CIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRV 603
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
E+EP A +V ++N+YA RWD VA +R MK+ +VKK PG S V G FTV
Sbjct: 604 LEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVG 663
Query: 615 D 615
D
Sbjct: 664 D 664
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 228/469 (48%), Gaps = 9/469 (1%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
+H HI+K D+F Q +++ Y L+ A KLFD+MP + S+ + GF++
Sbjct: 25 LHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQ 84
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ L + G + + L + + SVH++ +G AD V
Sbjct: 85 FQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTA 144
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF--DDSLNFYRHMIYDG 253
I AY+ C ++ A VF GI + +VSW ++ Y + + +DSL + M G
Sbjct: 145 LIDAYSVCGNVDAARQVFDGIY--FKDMVSWTGMVA--CYAENYCHEDSLLLFCQMRIMG 200
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+RP+ T+ + L SC EA G+ VH + +D D+ V L+ +Y+K G+I A+
Sbjct: 201 YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQ 260
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQS 372
F+ M + W+ MIS YAQ EAL LF M +++ VP+ T S++ C
Sbjct: 261 QFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASL 320
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
L LG + GL NV V NAL+D+Y+KCG I ++ +LF EK V+W T+I
Sbjct: 321 VLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTII 380
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
G G+ +AL+LF M+ LD++P VT+ +VL+A LE G +L K
Sbjct: 381 VGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKT-MY 439
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
N + + + D+ + G++ +A M K D W L+C IH
Sbjct: 440 NKDSVVANSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALICGYSIH 487
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 168/362 (46%), Gaps = 42/362 (11%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKND-IEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
W+ I +++ +AL LF RM+++ + PNN TF + +ACA L IH +
Sbjct: 274 WSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCV 333
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+K S++FV ++D+YAKC ++ + KLF +++ +WN +IVG+ Q+G EK L
Sbjct: 334 LKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKAL 393
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF NM + IQ VT + +A+ L + +HS I + D V N+ I Y
Sbjct: 394 NLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMY 453
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC + A L F +++ + VSWN++I G + ++LN + M +P+ T
Sbjct: 454 AKCGRIDDARLTFDKMDK--QDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLT 511
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V +LS+C L +GR H+ L I I Y
Sbjct: 512 FVGVLSACSNAGLLDKGR------AHFKSMLQDYGIEPCIEHY----------------- 548
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL---SMISGCGQSGALEL 377
T M+ + G DEA++L GE+P +V+ +++ C L+L
Sbjct: 549 -------TCMVWLLGRSGQFDEAVKLI------GEIPFQPSVMVWRALLGACVIHKNLDL 595
Query: 378 GK 379
GK
Sbjct: 596 GK 597
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 179/376 (47%), Gaps = 5/376 (1%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ Q AI + + KS+H + G D+ N ++ Y L+ A +F E L
Sbjct: 9 MLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFD--EMPL 66
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
VS+ ++ G + +F + + +G+ + +LL V + V
Sbjct: 67 TNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSV 126
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H++ G D V LI YS CG++D+AR +FDG+ + VSWT M++ YA+
Sbjct: 127 HAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCH 186
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
+++L LF M G P+ T+ + + C A ++GK A ++ V AL
Sbjct: 187 EDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIAL 246
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPN 459
+++Y+K G I +A++ F +P+ ++ W+ MI+ A + + EAL+LF +M + + PN
Sbjct: 247 LELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPN 306
Query: 460 RVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
TF +VLQAC L G + + KV ++ + + + D+ + G+++ ++
Sbjct: 307 NFTFASVLQACASLVLLNLGNQIHSCVLKV-GLDSNVFVSNALMDVYAKCGEIENSVKLF 365
Query: 520 QSMPIKSDAGIWGTLL 535
K++ W T++
Sbjct: 366 TGSTEKNEVA-WNTII 380
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 292/549 (53%), Gaps = 14/549 (2%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH + S F+ T +++ + LD A ++F++ + D +NAMI ++
Sbjct: 23 KQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSS 82
Query: 134 GFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+ ++ MR I D T + +A + K VH + IG + D +
Sbjct: 83 QTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFL 142
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI-Y 251
++ ++ Y C ++ A+ VF E + VV WN++I G DS ++ M+
Sbjct: 143 QSSLLNFYMVCGEIGNAQQVFD--EFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEV 200
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG-----IHYGFDLDVSVINTLISMYSKC 306
RP+ T++ L+ +C+ + L GR +H + + G L+ ++IN +Y KC
Sbjct: 201 KEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALIN----LYVKC 256
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G +D AR LFD + ++ V W ++I GY Q G L+E + L M + PD TV ++
Sbjct: 257 GYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVL 316
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S C Q GA LG W +A G+ D V + ALIDMY+KCG IG AR++F + E+ V
Sbjct: 317 SACAQMGAFNLGNWVHRFAEKKGIWD-VFIGTALIDMYAKCGFIGAARKVFDQMNERNVA 375
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
+W +++G A +G+ A++LF +M E RP+ +TFLAVL AC H+G +E G YF+LM
Sbjct: 376 TWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLM 435
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
+ Y++ P + HY CM DLLGR G L+EA + ++ M ++ + +WG LL AC IH NIEI
Sbjct: 436 LQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEI 495
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
GE+ A+ + +L YV +AN+YA R++ V +R MM + K G S++ I
Sbjct: 496 GEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGD 555
Query: 607 KTCTFTVED 615
F V D
Sbjct: 556 VVHEFVVAD 564
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 222/439 (50%), Gaps = 8/439 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
+N+ IR A+ ++ +M+ +I + T+PF+ KACA + +HG I
Sbjct: 72 YNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVI 131
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + D F+Q+++++ Y C + A ++FD+ +DV WNA+I G+A+ G +
Sbjct: 132 VRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSF 191
Query: 141 CLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDADVSVCNTWIS 198
+F M V ++ + T+MGL A I +K+L L +++H + + + + V + I+
Sbjct: 192 GVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALIN 251
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y KC L A +F I E + V WNS+I G ++ + R M +PD
Sbjct: 252 LYVKCGYLDGARKLFDEIPE--KNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDR 309
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TV +LS+C A G VH G DV + LI MY+KCG I +AR +FD
Sbjct: 310 FTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQ 368
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M +R +W A++SGYA G + A+ LF M +G PD +T L+++ C SG +E G
Sbjct: 369 MNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENG 428
Query: 379 K-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCA 436
K +FD + V ++D+ + G + +AREL + E VV W +++ C+
Sbjct: 429 KQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACS 488
Query: 437 LNGEFVEALDLFHQMMELD 455
++G H M++L+
Sbjct: 489 IHGNIEIGEWAAHHMIKLN 507
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 304/557 (54%), Gaps = 19/557 (3%)
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
CA L+ + +H I++ D+ + ++ + C + + A ++F+++ + +V
Sbjct: 29 CANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 183
N++I AQ + +F M+ G+ AD T L +A L ++K +H+
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 184 IGVDADVSVCNTWISAYAKCNDL--KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+G+ +D+ V N I Y++C L + A +F + E R VSWNS++GG + D
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE--RDTVSWNSMLGGLVKAGELRD 203
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSS-CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+ + M + D+ + ++L C E L + + +T++
Sbjct: 204 ARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMP-----ERNTVSWSTMV 254
Query: 301 SMYSKCGDIDSARFLFDGMC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
YSK GD++ AR +FD M + V+WT +I+GYA+KG L EA RL M A+G D
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
V+S+++ C +SG L LG + L N V NAL+DMY+KCG++ A ++F
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+P+K +VSW TM+ G ++G EA++LF +M +RP++VTF+AVL +C HAG +++
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 434
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G YF M KVY + P++ HY C+ DLLGR G+LKEA+ VQ+MP++ + IWG LL AC
Sbjct: 435 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 494
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPG 598
++H ++I + V L +L+P Y ++NIYA W+GVA++R+ MK V+K G
Sbjct: 495 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 554
Query: 599 QSLVHINGKTCTFTVED 615
S V + FTV D
Sbjct: 555 ASSVELEDGIHEFTVFD 571
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 219/457 (47%), Gaps = 14/457 (3%)
Query: 4 SSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA 63
++L R+ + ++ NS IR ++ ++A +F M++ + +N T+PF+ KA
Sbjct: 67 TNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA 126
Query: 64 CAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDC--AYKLFDKMPDRDVA 121
C+ S +M+H HI K SDI+V ++D Y++C L A KLF+KM +RD
Sbjct: 127 CSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV 186
Query: 122 SWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 181
SWN+M+ G + G L LF M Q D ++ + + +S +F
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMS-----KAFE 237
Query: 182 IHIGVDADVSVC-NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ + +V +T + Y+K D++MA ++F + + VV+W II G
Sbjct: 238 LFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLK 297
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
++ M+ G + D V+S+L++C L G +HS + V+N L+
Sbjct: 298 EADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALL 357
Query: 301 SMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLV 360
MY+KCG++ A +F+ + + VSW M+ G G EA+ LF M G PD V
Sbjct: 358 DMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKV 417
Query: 361 TVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T ++++ C +G ++ G +F + L V L+D+ + G + +A ++
Sbjct: 418 TFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQT 477
Query: 420 LP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+P E VV W ++ C ++ E A ++ +++LD
Sbjct: 478 MPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 288/540 (53%), Gaps = 3/540 (0%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH ++ + + ++ YA+ ++ A ++FDK P V +WNAMI+ +++ G
Sbjct: 26 IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGA 85
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + L L++ M G++ D T + +A + L + + G DV V
Sbjct: 86 MFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAA 145
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAKC + A VF + G R +V W ++I G + ++++ YR M
Sbjct: 146 VLNLYAKCGKMDEAMRVFDKM--GRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVE 203
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
D ++ L+ +C G +H + I +DV V +L+ MY+K G ++ A +
Sbjct: 204 GDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCV 263
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F M + +SW+A+ISG+AQ G AL+L M++ G PD V+++S++ C Q G L
Sbjct: 264 FRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFL 323
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
+LGK Y L + + A+IDMYSKCGS+ AR +F + + +SW +IA
Sbjct: 324 KLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASY 382
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
++G EAL LF QM E +++P+ TF ++L A +H+G +EKG +F++M Y++ P
Sbjct: 383 GIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPS 442
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
HY+CM DLL R G+++EA + ++SM + IW LL C H IGE A ++
Sbjct: 443 EKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVL 502
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EL P Y ++N +A RWD VA +R +MK+ +KK PG S++ +NGK F +ED
Sbjct: 503 ELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMED 562
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 219/439 (49%), Gaps = 5/439 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
++ WN+ I + +AL L+ RM + P++ T+ + KAC + D +
Sbjct: 70 VDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWR 129
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
V + D+FV ++++YAKC ++D A ++FDKM RD+ W MI G AQ G +
Sbjct: 130 QAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQARE 189
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ ++ M ++ D V ++GL QA H + S+H + I + DV V + +
Sbjct: 190 AVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVD 249
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YAK L++A VFR + + V+SW+++I G ++L M G++PD
Sbjct: 250 MYAKNGHLELASCVFRRML--YKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDS 307
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
++VS+L +C L G+ VH + I D +I MYSKCG + AR +FD
Sbjct: 308 VSLVSVLLACSQVGFLKLGKSVHGY-IVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQ 366
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ R +SW A+I+ Y G +EAL LF M PD T S++S SG +E G
Sbjct: 367 ISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKG 426
Query: 379 K-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCA 436
+ WF ++ + ++D+ S+ G + +A+EL ++ E + W +++GC
Sbjct: 427 RYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCL 486
Query: 437 LNGEFVEALDLFHQMMELD 455
+G+F+ +++EL+
Sbjct: 487 NHGKFLIGEMAAKKVLELN 505
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 259/442 (58%), Gaps = 3/442 (0%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
++ VH+ + G D+ + N + YA+ + A +F G+ +R +W+ ++GG
Sbjct: 19 IRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT--MRDSKTWSVMVGGF 76
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+R ++ G PD T+ ++ +C L GR++H + +G D
Sbjct: 77 AKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDH 136
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V +L+ MY+KC ++ A+ LF+ M + V+WT MI YA + E+L LF M
Sbjct: 137 FVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYAD-CNAYESLVLFDRMREE 195
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G VPD V ++++++ C + GA+ ++ ++Y G +V++ A+IDMY+KCGS+ A
Sbjct: 196 GVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESA 255
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
RE+F + EK V+SW+ MIA +G +A+DLFH M+ + PNRVTF+++L AC+HA
Sbjct: 256 REVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHA 315
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
G +E+G +FN M + + V P++ HY+CM DLLGR G+L EAL +++M ++ D +W
Sbjct: 316 GLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSA 375
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQV 593
LL AC+IH +E+ E A L EL+P + YV ++NIYA G+W+ VA R MM + ++
Sbjct: 376 LLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKL 435
Query: 594 KKFPGQSLVHINGKTCTFTVED 615
KK PG + + ++ KT F+V D
Sbjct: 436 KKIPGWTWIEVDNKTYQFSVGD 457
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 220/435 (50%), Gaps = 12/435 (2%)
Query: 61 AKACAKL----SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
A++C L + + + +H H+V + D+ + ++ YA+ +D AY LFD +
Sbjct: 3 AESCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT 62
Query: 117 DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
RD +W+ M+ GFA+ G F + G+ D T+ + + L + +
Sbjct: 63 MRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRV 122
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+H + G+ +D VC + + YAKC ++ A+ +F + + +V+W +IG
Sbjct: 123 IHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLS--KDLVTWTVMIGAYADC 180
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ + +SL + M +G PD +V+++++C A+ + R + + + GF LDV +
Sbjct: 181 NAY-ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG 239
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
+I MY+KCG ++SAR +FD M ++ +SW+AMI+ Y G +A+ LF M + +
Sbjct: 240 TAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAIL 299
Query: 357 PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 415
P+ VT +S++ C +G +E G ++F++ ++ +V ++D+ + G + +A
Sbjct: 300 PNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALR 359
Query: 416 LFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR-PNRVTFLAVLQACTHA 473
L A+ EK W+ ++ C ++ + A + ++EL + P L+ + A A
Sbjct: 360 LIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYA--KA 417
Query: 474 GFLEKGWGYFNLMTK 488
G EK + ++MT+
Sbjct: 418 GKWEKVAKFRDMMTQ 432
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 144/294 (48%), Gaps = 5/294 (1%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
FR + + + P+N T PF+ + C +D ++IH ++K SD FV ++VDMYAK
Sbjct: 89 FRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAK 148
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C ++ A +LF++M +D+ +W MI +A E L LF MR G+ D V ++ +
Sbjct: 149 CIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYES-LVLFDRMREEGVVPDKVAMVTV 207
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
A + + + + + G DV + I YAKC ++ A VF ++E +
Sbjct: 208 VNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKE--K 265
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG-RLV 280
V+SW+++I Y + D+++ + M+ P+ T VSLL +C + +G R
Sbjct: 266 NVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFF 325
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISG 333
+S + DV ++ + + G +D A L + M ++ W+A++
Sbjct: 326 NSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 7/235 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL + S + W I D N A+++L+LF RM++ + P+ + + ACAKL
Sbjct: 157 RLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMVTVVNACAKLG 215
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
++ + +IV++ F D+ + T M+DMYAKC ++ A ++FD+M +++V SW+AMI
Sbjct: 216 AMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIA 275
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVD 187
+ G + + LF+ M I + VT + L A HA + L+ +S V
Sbjct: 276 AYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVR 335
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRG--IEEGLRTVVSWNSIIGGCTYGDKFD 240
DV + + L A + +E+ R W++++G C K +
Sbjct: 336 PDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERL---WSALLGACRIHSKME 387
>gi|357450559|ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484604|gb|AES65807.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1040
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 317/598 (53%), Gaps = 10/598 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPN-NLTFPFIAKACAKLSDFLYSQMIHGHI 80
+N+ +R E K L L++ M + + P+ + F + + M HGH+
Sbjct: 87 YNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHV 146
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VK + V T++++Y + L ++ + WN +I + G + +
Sbjct: 147 VKLGMDAFDLVGNTLIELYGFLN----GNGLVERKSVTKLNFWNNLIYEAYESGKIVESF 202
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF MR +Q + VT++ L +A + + L + K +HS + + +++V +S Y
Sbjct: 203 ELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMY 262
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AK + LK A L+F + E + VV WN +I + +SL M+ G RPD+ T
Sbjct: 263 AKLDSLKDARLMFEKMPE--KDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFT 320
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ +SS +++ G+ +H+ I G D VSV N+L+ MYS C D++SAR +F +
Sbjct: 321 AIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIK 380
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
DRT VSW+AMI GYA + EAL LF M+ +G DLV V++++ + GAL +
Sbjct: 381 DRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGY 440
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--KTVVSWTTMIAGCALN 438
Y+ L + +L++ Y+KCG I AR+LF K +V+W +MI + +
Sbjct: 441 LHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNH 500
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
GE+ + +L++Q+ ++P+ VTFL +L AC ++G ++KG F M +Y P H
Sbjct: 501 GEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEH 560
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-RNIEIGEYVAYRLFEL 557
+CM DLLGR GK+ EA +++ + SDA ++G LL ACK+H + E A +L ++
Sbjct: 561 NACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKM 620
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP + A YV ++NI+A G+WD A +R+ ++ +KK PG S V ++G+ F V D
Sbjct: 621 EPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVAD 678
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 209/403 (51%), Gaps = 5/403 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMI 76
+ +N WN+ I EA + + ++ LF RM+ +++PN++T + +A + + +++
Sbjct: 180 TKLNFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVL 239
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H +V S ++ V T ++ MYAK D L A +F+KMP++DV WN MI ++ G
Sbjct: 240 HSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCP 299
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ L L Y M GI+ D T + + K + K +H+ I G D VSV N+
Sbjct: 300 KESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSL 359
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+ C DL A +F I++ RTVVSW+++I G D ++L+ + M G +
Sbjct: 360 VDMYSTCADLNSARKIFGLIKD--RTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKV 417
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D+ V+++L + AL +H + + D S+ +L++ Y+KCG I+ AR LF
Sbjct: 418 DLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLF 477
Query: 317 DGMCDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+ + V+W +MI+ Y+ G+ + L+ ++ + PD VT L M++ C SG
Sbjct: 478 NEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGL 537
Query: 375 LELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
++ GK F G + + ++D+ + G I +AR++
Sbjct: 538 VDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKI 580
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 199/438 (45%), Gaps = 15/438 (3%)
Query: 45 MKKNDIEPNNLTFPF-----IAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
+K +I+P T F I C K Y Q IH + + + ++D Y
Sbjct: 7 LKITNIKPFQTTRFFNTTSSILNLCTKPQ---YLQQIHARFFLHGLHQNSSLSSKLIDSY 63
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVM 159
+ L ++K+F + D +NA + G EK L L+ M + D
Sbjct: 64 SNFGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCF 123
Query: 160 GLTQAAIHAKHLS-LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ ++ + H L+ H + +G+DA V NT I Y N + E +
Sbjct: 124 SVLKSLFYVFHEKGLIMMAHGHVVKLGMDAFDLVGNTLIELYGFLNGNGLVE------RK 177
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
+ + WN++I K +S + M + +P+ T+++LL + V +L G+
Sbjct: 178 SVTKLNFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGK 237
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
++HS + +++V L+SMY+K + AR +F+ M ++ V W MIS Y+ G
Sbjct: 238 VLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSG 297
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
E+L L + M +G PD+ T + IS + ++E GK G V V N
Sbjct: 298 CPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHN 357
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+L+DMYS C + AR++F + ++TVVSW+ MI G A++ +EAL LF +M +
Sbjct: 358 SLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKV 417
Query: 459 NRVTFLAVLQACTHAGFL 476
+ V + +L A G L
Sbjct: 418 DLVIVINILPAFAKIGAL 435
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ + T+ W++ I+ + +AL LF MK + + + + I A AK+ Y
Sbjct: 378 LIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHY 437
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF--DKMPDRDVASWNAMIVGF 130
+HG+ +K+ S ++T++++ YAKC ++ A KLF +K +D+ +WN+MI +
Sbjct: 438 VGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAY 497
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ G + L+ ++L ++ D VT +G+ A +++
Sbjct: 498 SNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNS 535
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 182/582 (31%), Positives = 295/582 (50%), Gaps = 4/582 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + H A M ++ N + + AC + + IH V
Sbjct: 9 WNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAV 68
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + + + +VDMY K ++ + ++FD M +++ SWN+ I F GF VL
Sbjct: 69 KVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLR 128
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M + +T+ L A + L + VH + I +D D+ V N+ + YA
Sbjct: 129 MFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYA 188
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L+ A +F +++ R VVSWN++I ++ M G P+ T+
Sbjct: 189 KFGSLEKASTIFEQMKD--RNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITL 246
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V++L +C +L G+ +H+ I G D+ + N LI MYSKCG + AR +F+ +
Sbjct: 247 VNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE-RSE 305
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VS+ +I GY+Q E+L LF M + G D V+ + +S C + GK
Sbjct: 306 KDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEI 365
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L + + N+L+D+Y+K G + A ++F + +K V SW TMI G ++G+
Sbjct: 366 HCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQI 425
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A +LF M L + V+++AVL AC+H G ++KG YF+ M + P+ HY+C
Sbjct: 426 DIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMV-AQNIEPQQMHYAC 484
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G+L + + ++ MP +++ +WG LL AC+IH NIE+ ++ A LFEL+P
Sbjct: 485 MVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEH 544
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+ Y M N+YA GRW+ +R +MK +V+K P S V
Sbjct: 545 SGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQ 586
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/463 (30%), Positives = 231/463 (49%), Gaps = 11/463 (2%)
Query: 115 MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 174
MP+RDV SWN+++ F G +M G + +++ + A +
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 175 KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT 234
S+H+ + +G++ V++ N + Y K D++ + VF G+ E + VSWNS IG
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLE--QNEVSWNSAIGCFL 118
Query: 235 YGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVS 294
+ D L +R M P T+ SLL + V + GR VH + I DLD+
Sbjct: 119 NAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIF 178
Query: 295 VINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 354
V N+L+ MY+K G ++ A +F+ M DR VSW AMI+ Q G EA RL M+ +G
Sbjct: 179 VANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSG 238
Query: 355 EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 414
E P+ +T+++++ C + +L++GK ++ GL ++ + NALIDMYSKCG + AR
Sbjct: 239 ECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLAR 298
Query: 415 ELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
+F EK VS+ T+I G + + E+L LF QM + + + V+F+ L ACT+
Sbjct: 299 NIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLS 357
Query: 475 FLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
+ G + L+ ++ +P L++ + DL + G L A + K D W T
Sbjct: 358 VFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKIFNKIT-KKDVASWNT 414
Query: 534 LLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
++ +H I+I A+ LFEL Y ++ I L
Sbjct: 415 MILGYGMHGQIDI----AFELFELMKGDGLDYDHVSYIAVLAA 453
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 3/254 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + WN+ I V +A L M+K+ PN++T + ACA+++ +
Sbjct: 204 KDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGK 263
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++ D+F+ ++DMY+KC +L A +F++ ++D S+N +I+G++Q
Sbjct: 264 QIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSP 322
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + L LF MR VGI D V+ MG A + K +H + + + N
Sbjct: 323 WCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN 382
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ + Y K L A +F I + + V SWN++I G + D + + M DG
Sbjct: 383 SLLDLYTKGGMLVTASKIFNKITK--KDVASWNTMILGYGMHGQIDIAFELFELMKGDGL 440
Query: 255 RPDVTTVVSLLSSC 268
D + +++L++C
Sbjct: 441 DYDHVSYIAVLAAC 454
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 290/566 (51%), Gaps = 20/566 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W + I + + +AL L+ M DIEP+++ + +AC++L + + +H
Sbjct: 300 TVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVH 356
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I F + VQT +VDMY KC L A + FD RDV SW ++I ++ F
Sbjct: 357 SRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGR 416
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L +F++M L G++ + +T + A L +++HS + G +D V N +
Sbjct: 417 EALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALV 476
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S Y+K + A +VF I ++ SW ++ T ++L Y + +GFRP
Sbjct: 477 SMYSKFGRVDFARMVFDSIP--VKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPG 534
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ L SC E + + R +H F D+ + N L+++Y+KCG+++ AR +FD
Sbjct: 535 SPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFD 594
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M ++ VSWT MI GYAQ G EAL L+ AM+ P+ + + +IS C GAL
Sbjct: 595 QMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDVQ---PNFIAFVPVISSCADLGALVE 651
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ GL++N ++ AL++MY+KCG +G ARE F + +W +M A
Sbjct: 652 GQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQ 711
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G + L+L+ +M ++PN +T L+VL AC+H G LE+ F M + + P
Sbjct: 712 FGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSE 771
Query: 498 HYSCMADLLGRKGKLKEALDFVQ----------SMPIKSDAGIWGTLLCACKIHRNIEIG 547
HYSCM DLLGR G+L+EA V+ + P+ A W + L ACK H +
Sbjct: 772 HYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSA--WMSFLGACKTHNDWGRA 829
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYA 573
A +L+EL+P +APYV ++ Y+
Sbjct: 830 AGAAEKLYELDPEDSAPYVLLSQTYS 855
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 247/507 (48%), Gaps = 16/507 (3%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+AL L+ M + ++PN+ TF + ACA L D + +H I +S D +Q ++
Sbjct: 13 EALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALL 72
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
++YAKC L+ + ++F+ M R VA+WN MI + Q F ++ L F M F
Sbjct: 73 NLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRMDAPPSSITFT 132
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSF--GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
+V+G A L K++H G + AD + N+ ++ Y KC L+ AE VF
Sbjct: 133 SVLG---ACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFH 189
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEA 273
GI + SW ++I ++ + M+ +G PD T +L++C
Sbjct: 190 GIRR--KNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGD 247
Query: 274 LVQGRLVHS--HGIH-YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
L G +H+ H I+ G + D + + ++S++++CG + R +FD M RT V+WT M
Sbjct: 248 LETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTM 307
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 390
I+ Y Q+G EAL L+ M+ PD + + +++ C + LE G+ + S
Sbjct: 308 IAAYNQRGYSMEALELYHCMDIE---PDDIALSNVLQACSRLKNLEQGRAVHSRIASRDF 364
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
+ ++MV L+DMY KCG + +AR F + V+SWT++I + EAL++FH
Sbjct: 365 EPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHS 424
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
M + PN +TF V+ AC+ L G + + ++ E + + + + G
Sbjct: 425 MELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVG-NALVSMYSKFG 483
Query: 511 KLKEALDFVQSMPIKSDAGIWGTLLCA 537
++ A S+P+K W +L A
Sbjct: 484 RVDFARMVFDSIPVKRYPS-WRVMLVA 509
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 256/534 (47%), Gaps = 18/534 (3%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ + T+ WN+ I V + +AL FRRM D P+++TF + AC
Sbjct: 86 RIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPD 142
Query: 69 DFLYSQMIHGHIVKSP--FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
D + IH I S +D +Q ++V MY KC L+ A ++F + ++ SW AM
Sbjct: 143 DLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAM 202
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-- 183
I +AQ G+ + + +F +M G ++ D +T G+ A L +H+ IH
Sbjct: 203 ITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHAL-IHRI 261
Query: 184 --IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD 241
+G++ D + + +S +A+C L +F + RTVV+W ++I +
Sbjct: 262 YTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPH--RTVVTWTTMIAAYNQRGYSME 319
Query: 242 SLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 301
+L Y M PD + ++L +C + L QGR VHS F+ + V L+
Sbjct: 320 ALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVD 376
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
MY KCGD+ AR FDG R +SWT++I+ Y+ + EAL +F +ME G P+ +T
Sbjct: 377 MYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSIT 436
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++I C + +L G+ + + G + V NAL+ MYSK G + AR +F ++P
Sbjct: 437 FCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIP 496
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
K SW M+ NG EAL+++ ++ RP F A L +CT + +
Sbjct: 497 VKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARA 556
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ K P+L + + ++ + G+L++A M K++ W T++
Sbjct: 557 IHGVI-KSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVS-WTTMI 608
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 5/209 (2%)
Query: 330 MISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 389
MIS YAQKG EAL L+ M+ G P+ T ++S C +E GK
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 390 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFH 449
+ + ++ NAL+++Y+KCG + ++R +F A+ +TV +W TMI + F EAL+ F
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120
Query: 450 QMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLLGR 508
+M D P+ +TF +VL AC LE G + + Q+ + + + + G+
Sbjct: 121 RM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
G L++A + K +A W ++ A
Sbjct: 178 CGSLEDAERVFHGIRRK-NAFSWTAMITA 205
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKV 489
MI+ A G EAL+L+ +M E + PN TF VL AC +E+G + + V
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+V+ L + + +L + G L+E+ ++M ++ A W T++ A H
Sbjct: 61 ARVDTVLQN--ALLNLYAKCGDLEESRRIFEAMERRTVA-TWNTMITAYVQH 109
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 291/559 (52%), Gaps = 36/559 (6%)
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+QT ++ +D A + D+ P SWN++I + G + L L+ M
Sbjct: 29 LQTHLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSS 88
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ T + +A + + +H+ + +G +D+ VCN+ I Y KC L A
Sbjct: 89 TKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSAR 148
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCT------------------------------YGDK-- 238
+ + G R VSWNSII G YG +
Sbjct: 149 NFWDDM--GFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGD 206
Query: 239 FDDSLNFYRHMIY--DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
F + L+ +R M+ D +P+ T+V LLS+C GR + L+ ++
Sbjct: 207 FVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILV 266
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
LI MYSKCGD++ A +FDG+ + SW A+I+G Q G L+EA+ L+ M+A
Sbjct: 267 TALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVK 326
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+ +T+++++S C GALELG+ Y GL NV++ AL+DMY+KCG I DA +
Sbjct: 327 PNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLI 386
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F EK V W MI G A +G+ ++L +F QM+ ++PN VTF+ VL AC H+G +
Sbjct: 387 FVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLV 446
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
E+G F+ M + ++P+L HY+CM DLLGR G LKEA + VQ+M I D+ IWG LL
Sbjct: 447 EEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLS 506
Query: 537 ACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKF 596
AC+IHRN+E+ + ++ + + + + ++NIYA GRW VA +R +K ++KK
Sbjct: 507 ACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKP 566
Query: 597 PGQSLVHINGKTCTFTVED 615
G S V ++G F VED
Sbjct: 567 SGCSWVEVDGVVHRFVVED 585
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 240/481 (49%), Gaps = 41/481 (8%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S T WNS IR +L L+ +M ++ +P+N TFPF+ KAC+ L L +
Sbjct: 55 SPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQ 114
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH H+++ F SD+FV +++DMY KC RLD A +D M RD SWN++I G+ Q G
Sbjct: 115 IHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQ 174
Query: 136 LEKVLCLFYNMRL-------------VGIQADFVTVMGLTQAAI---------HAKHLSL 173
+EK LF M + G + DFV ++ L + + A + L
Sbjct: 175 VEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCL 234
Query: 174 LKSVHSF-----GIHIGVDADVS-------VCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
L + + G + V DV+ + I Y+KC D++ A +F G+ +
Sbjct: 235 LSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVS--CK 292
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
+ SWN+II GC G +++++ YRHM +P+ T+V++LS+C AL GR VH
Sbjct: 293 NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVH 352
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ G DL+V + L+ MY+KCG ID A +F ++ W AMI G A GD
Sbjct: 353 LYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGR 412
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNAL 400
++L +F M AG P+ VT + ++S C SG +E G+ F + A GL + +
Sbjct: 413 DSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACM 472
Query: 401 IDMYSKCGSIGDARELFYAL--PEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+D+ + G + +A EL + P +++ W +++ C ++ +E D + + P
Sbjct: 473 VDLLGRAGHLKEAYELVQNMLIPPDSII-WGALLSACRIHRN-LELADKISETIMASQDP 530
Query: 459 N 459
N
Sbjct: 531 N 531
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 40/309 (12%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
LLS +L Q +H+ + +G L +I LI ++S ID ARF+ D T
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPT 57
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDN 383
SW ++I Y G +L L+ M + P T ++ C G++ G+
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 384 YACSGGLKDNVMVCNALIDMYSKC-------------------------------GSIGD 412
+ G ++ VCN+LIDMY KC G +
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEK 177
Query: 413 ARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMM--ELDLRPNRVTFLAVLQA 469
AR+LF +P + VV WT MI G G+FVE L LF QM+ +++PN T + +L A
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSA 237
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
C+ E G + ++ V ++ + + D+ + G +++A + K+
Sbjct: 238 CSTLCNYEVG-RFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPS 296
Query: 530 IWGTLLCAC 538
W ++ C
Sbjct: 297 -WNAIITGC 304
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 285/534 (53%), Gaps = 19/534 (3%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDR---LDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+HG ++KS ++ + ++D C L A +F+ + V WN+MI G++
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+K L + M G D+ T + +A + + VH F + G + ++ V
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYV 144
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ Y C ++ VF I + VV+W S+I G ++F D++ +R M +
Sbjct: 145 STCLLHMYMCCGEVNYGLRVFEDIPQW--NVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 253 GFRPDVTTVVSLLSSC-VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G + + T +V LL +C C + Q ++ GF+ V + +LI MY+KCGD+ +
Sbjct: 203 GVKANETIMVDLLVACGRCFDPYFQSKV--------GFN--VILATSLIDMYAKCGDLRT 252
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR+LFDGM +RT VSW ++I+GY+Q GD +EAL +F M G PD VT LS+I
Sbjct: 253 ARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMI 312
Query: 372 SGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
G +LG+ Y G +KD +VC AL++MY+K G A++ F L +K ++WT
Sbjct: 313 QGCSQLGQSIHAYVSKTGFVKDAAIVC-ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTV 371
Query: 431 MIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I G A +G EAL +F +M E + P+ +T+L VL AC+H G +E+G YF M +
Sbjct: 372 VIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDL 431
Query: 490 YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEY 549
+ + P + HY CM D+L R G+ +EA V++MP+K + IWG LL C IH N+E+ +
Sbjct: 432 HGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDR 491
Query: 550 VAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+ + E E + YV ++NIYA GRW V +R MK +V K G S V
Sbjct: 492 IRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 545
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 221/436 (50%), Gaps = 19/436 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS IR + KAL+ ++ M + P+ TFP++ KAC+ L D + +HG +V
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K+ F +++V T ++ MY C ++ ++F+ +P +V +W ++I GF +
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI--GVDADVSVCNTWISA 199
F M+ G++A+ ++ L L+ F + V +V + + I
Sbjct: 195 AFREMQSNGVKANETIMVDL-----------LVACGRCFDPYFQSKVGFNVILATSLIDM 243
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC DL+ A +F G+ E RT+VSWNSII G + +++L + M+ G PD
Sbjct: 244 YAKCGDLRTARYLFDGMPE--RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKV 301
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T +S++ + + G+ +H++ GF D +++ L++MY+K GD +SA+ F+ +
Sbjct: 302 TFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDL 361
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VPDLVTVLSMISGCGQSGALELG 378
+ ++WT +I G A G +EAL +F M+ G PD +T L ++ C G +E G
Sbjct: 362 EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEG 421
Query: 379 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCA 436
++F GL+ V ++D+ S+ G +A L +P K V+ W ++ GC
Sbjct: 422 QRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCD 481
Query: 437 LNGEFVEALDLFHQMM 452
++ E +E D M+
Sbjct: 482 IH-ENLELTDRIRSMV 496
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 25/229 (10%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKA-----CAKLSDFLY 72
T+ WNS I +A +AL +F M I P+ +TF + +A C++L
Sbjct: 264 TLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL----- 318
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
Q IH ++ K+ F D + +V+MYAK + A K F+ + +D +W +I+G A
Sbjct: 319 GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLAS 378
Query: 133 MGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIH-------AKHLSLLKSVHSFGIHI 184
G + L +F M+ G D +T +G+ A H ++ + ++ +H
Sbjct: 379 HGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH------ 432
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
G++ V + ++ + AE + + + + W +++ GC
Sbjct: 433 GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNI-WGALLNGC 480
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 299/553 (54%), Gaps = 13/553 (2%)
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
K ++ + +H I+KS D+FV ++ ++ C ++ A F+++ +V +N
Sbjct: 29 KCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNT 88
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MI + + F+ M+ G AD T L + L +++SVH+ G
Sbjct: 89 MIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFG 148
Query: 186 VDADVSVCNTWISAYAKCND--LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSL 243
+DV V N+ I +Y+KC + A+ +F + R VVSWNS+I G G ++++
Sbjct: 149 FMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMG-ARRDVVSWNSMISGLAKGGLYEEAR 207
Query: 244 NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISM 302
+ M D + ++L V G++ + + + +V +T++
Sbjct: 208 KVFDEMP----EKDGISWNTMLDGYV-----KVGKMDDAFKLFDEMPERNVVSWSTMVLG 258
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y K GD++ AR LFD M + VSWT ++SG+A+KG EA+ LF ME A D TV
Sbjct: 259 YCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTV 318
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+S+++ C +SG L LG+ + K + NAL+DMY+KCG + A ++F +
Sbjct: 319 MSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKN 378
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
K VVSW M+ G A++G V+AL+LF +M E PN+VT + VL ACTHAG ++ G Y
Sbjct: 379 KDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRY 438
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
F+ M + Y + PE+ HY CM DLLGRKG+L+EA+ +++MP+ +A IWGTLL AC++H
Sbjct: 439 FSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHN 498
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+E+ V L ELEP + + ++NIYA G W+ VAN R M+ KK G S +
Sbjct: 499 AVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSI 558
Query: 603 HINGKTCTFTVED 615
+N + FTV D
Sbjct: 559 EVNNEVHEFTVFD 571
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 215/444 (48%), Gaps = 17/444 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ +N+ IR ++ +A F M+++ +N TFPF+ K C + +H
Sbjct: 82 NVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVH 141
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDR--LDCAYKLFDKM-PDRDVASWNAMIVGFAQMG 134
I K F SD+FV +++D Y+KC + A KLF M RDV SWN+MI G A+ G
Sbjct: 142 AQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGG 201
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVC 193
E+ +F M + D G++ + ++ + K +F + + + +V
Sbjct: 202 LYEEARKVFDEMP----EKD-----GISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSW 252
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+T + Y K D++MA ++F + ++ +VSW I+ G ++++ + M
Sbjct: 253 STMVLGYCKAGDMEMARMLFDKMP--VKNLVSWTIIVSGFAEKGLAREAISLFDQMEKAC 310
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+ D TV+S+L++C L G +H+ + F + N L+ MY+KCG ++ A
Sbjct: 311 LKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAY 370
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F+ + ++ VSW AM+ G A G +AL LF M+ G P+ VT++ ++ C +G
Sbjct: 371 DVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAG 430
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTM 431
++ G ++F L V ++D+ + G + +A L +P + W T+
Sbjct: 431 LIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTL 490
Query: 432 IAGCALNGEFVEALDLFHQMMELD 455
+ C ++ A ++ ++EL+
Sbjct: 491 LGACRMHNAVELAREVLDHLVELE 514
>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 851
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 296/569 (52%), Gaps = 12/569 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+ T + CA L + +HG KS + + V +VDMYAKC L A + F
Sbjct: 169 DEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAF 228
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV---GIQADFVTVMGLTQAAIHAK 169
+ P V SWN M+ + + L +M++ + AD +TV+ + A
Sbjct: 229 PEAPS--VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPT 286
Query: 170 HLSLLKSVHSFGIHIGVDADV-SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
LS L+ +H+F + G+DA V N ++AY +C L A+ VF I +TV SWN+
Sbjct: 287 ELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRR--KTVSSWNT 344
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG 288
+I + F + G +PD ++ SLL +C P+ L+ + H + G
Sbjct: 345 LISAHAQQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNG 404
Query: 289 FDLDVSVINTLISMYSKCGDIDS-ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
+ D + +L+S Y +C + AR LFD M ++ V W AMISGY+Q G E+L+LF
Sbjct: 405 LERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLF 464
Query: 348 FAMEAA-GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
M++ G +++ S + C + ++ LGK +A L D+ + ++LIDMYSK
Sbjct: 465 REMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSK 524
Query: 407 CGSIGDARELFYALPEKTV-VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
CG + DAR F L + VSWT MI G A+NG EA++L+ +M + P+ T+L
Sbjct: 525 CGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLG 584
Query: 466 VLQACTHAGFLEKGWGYFNLM-TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
+L AC HAG LE+G +F+ M +++ +L HYSC+ +L R G+ +A+ + MP
Sbjct: 585 LLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQ 644
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ DA I ++L AC IH E+G VA RL ELEP A YV +N+YA RWD + +
Sbjct: 645 EPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKV 704
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
R M++ + K PG S + + GK +F
Sbjct: 705 RKMLRDAGIAKEPGCSWIDVAGKVYSFVA 733
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 207/438 (47%), Gaps = 27/438 (6%)
Query: 50 IEPNNLTFPFIAKACA--KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDC 107
I P+ T P A++C ++ + +H K D FV ++V MY +C R++
Sbjct: 62 IAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVED 121
Query: 108 AYKLFDKMPD--RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI-----QADFVTVMG 160
A K+F +PD R++ SWNA++ + G + L LF + LV + +A VTV+
Sbjct: 122 AEKVFGGIPDAARNIVSWNALMAALS--GDPRRGLELFRDC-LVAVGGMVDEATLVTVLP 178
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
+ A ++ ++VH G DA V N + YAKC +L AE F
Sbjct: 179 MCAALGWSE---TGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP--- 232
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMI---YDGFRPDVTTVVSLLSSCVCPEALVQG 277
+VVSWN ++G T + + R M + D TV+S+L +C P L +
Sbjct: 233 -SVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRL 291
Query: 278 RLVHSHGIHYGFDLDV-SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
R +H+ + G D V N L++ Y +CG + A +F + +T SW +IS +AQ
Sbjct: 292 RELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQ 351
Query: 337 KGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+ + A+ LF M A G PD ++ S++ C L K + GL+ + +
Sbjct: 352 Q-NTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTV 410
Query: 396 VCNALIDMYSKCGSIGD-ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+ +L+ Y +C AR LF A+ EK V W MI+G + NG E+L LF +M +
Sbjct: 411 IRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSV 470
Query: 455 DLRPNRV-TFLAVLQACT 471
+ + V + + L AC+
Sbjct: 471 EGHCSSVISATSALMACS 488
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 13/313 (4%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R T++ WN+ I +N A L + ++P+ + + ACA L+ +
Sbjct: 335 RRKTVSSWNTLISAHAQQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVK 394
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLD-CAYKLFDKMPDRDVASWNAMIVGFAQM 133
HG I+++ D ++ +++ Y +C R + A LFD M ++ W AMI G++Q
Sbjct: 395 ATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQN 454
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS---LLKSVHSFGIHIGVDADV 190
G + L LF M+ ++ +V+ T A + LS L K +H F + + D
Sbjct: 455 GLPGESLQLFREMQ--SVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDP 512
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
+ ++ I Y+KC ++ A F + + VSW ++I G +++ Y M
Sbjct: 513 FLSSSLIDMYSKCGFVEDARTFFDRL-KARDAKVSWTAMITGYAVNGLGREAVELYGKMR 571
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRL----VHSHGIHYGFDLDVSVINTLISMYSKC 306
+G PD T + LL +C L +G + +H H+ ++ + + +I M S+
Sbjct: 572 REGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNH--HHKIEVKLEHYSCVIGMLSRA 629
Query: 307 GDIDSARFLFDGM 319
G A L M
Sbjct: 630 GRFADAVALMAEM 642
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 299/584 (51%), Gaps = 13/584 (2%)
Query: 26 IREAVDKNEAHKALLLFRRMKKN--------DIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
+ + ++ N+ K L R +K+ ++ + F+ + C SD + IH
Sbjct: 180 LNDEIEANDGAKQLPSLRISRKSFVSKSENSSVKLEDFYVSFLQR-CVLTSDSRHGSAIH 238
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+K +F +++ Y KC RL +LFD+MP+R+V SW+A+I GF Q G
Sbjct: 239 AKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPN 298
Query: 138 KVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L LF M G I + T++ A + L +++F + +G ++V + N +
Sbjct: 299 EALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAF 358
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
++A + L A VF + VSWN+++ G F+ F+R M + +P
Sbjct: 359 LTALIRHEKLLEALEVFESCLS--KDTVSWNAMMAGYLQLAYFELP-KFWRRMNLESVKP 415
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D T S+L+ G VH + G+ D+ V N+L MY K + F
Sbjct: 416 DNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAF 475
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M SWT M +G Q G+ +AL + + M+ G + T+ + ++ C ++E
Sbjct: 476 DEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIE 535
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
GK F G +V V NAL+DMY+KCG + A +F ++ E++VVSWTTMI G A
Sbjct: 536 EGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFA 595
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
NG+ EAL +F +M + + PN +TF+ VL AC+ GF+++ W YF+ M+ + + P
Sbjct: 596 HNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSE 655
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
+HY CM +LLGR G +KEA D + MP + + +W TLL AC +H +IE G+ A
Sbjct: 656 DHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALN 715
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
L+ + + Y+ ++N++A G WD V LR +M+ VKK PG S
Sbjct: 716 LDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKKVPGSS 759
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 15/230 (6%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
SS + W + E KAL + MK + N T +CA L+ +
Sbjct: 480 SSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKK 539
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
HG +K D+ V ++DMYAKC + A +F M +R V SW MI+GFA G
Sbjct: 540 FHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQ 599
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDA 188
++ L +F MR + + +T + + A K+ S + + H I
Sbjct: 600 TKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG----IAPSE 655
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC-TYGD 237
D VC + A C +K AE + + ++V W +++G C +GD
Sbjct: 656 DHYVCMVNLLGRAGC--IKEAEDLILQMPFQPGSLV-WQTLLGACLVHGD 702
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 308/613 (50%), Gaps = 14/613 (2%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR +++ WN+ + +A L R M + N ++ A
Sbjct: 54 PRRDEV-------SWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVA 106
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +KS +++F + ++D+YAKC R+ A ++FD MP+R+ SWNA+I
Sbjct: 107 RRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALI 166
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ + G + L LF M G+ D T L A+ L+ +H + G
Sbjct: 167 AGYTESGDMASALELFLEMEREGLAPDEATFASLL-TAVEGPSCFLMHQLHGKIVKYGSA 225
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY- 246
++V N I+AY++C LK + +F GI + +R ++SWN+++G T+ D+++ F+
Sbjct: 226 LGLTVLNAAITAYSQCGSLKDSRRIFDGIGD-IRDLISWNAMLGAYTHNGMDDEAMKFFV 284
Query: 247 RHMIYDGFRPDVTTVVSLLSSCV-CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
R M G PD+ + S++SSC QGR++H I + V N LI+MY++
Sbjct: 285 RMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR 344
Query: 306 CGD---IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
+ ++ A F+ + + VSW +M++GY+Q G +AL+ F M + D
Sbjct: 345 YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAF 404
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ + + L+LGK G N V ++LI MYSK G I DAR+ F +
Sbjct: 405 SAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+ V W MI G A +G+ LF++M++ + +TF+ ++ +C+HAG +++G
Sbjct: 465 SSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
N M Y V + HY+C DL GR G+L +A + SMP + DA +W TLL AC+IH
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+E+ VA LF EP + YV ++++Y+ G W A ++ +MK+ + K PG S +
Sbjct: 585 NVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWI 644
Query: 603 HINGKTCTFTVED 615
+ + +F ED
Sbjct: 645 EVKNEVHSFNAED 657
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 191/383 (49%), Gaps = 9/383 (2%)
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D L A ++FD++P RD SWNA++ A G + L M G+ ++ +
Sbjct: 41 DGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSAL 100
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
++A A+ ++ + S + G+ +V + + YAKC ++ A VF G+ E R
Sbjct: 101 RSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPE--RN 158
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VSWN++I G T +L + M +G PD T SLL++ P + +L H
Sbjct: 159 TVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQL-HG 217
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLD 341
+ YG L ++V+N I+ YS+CG + +R +FDG+ D R +SW AM+ Y G D
Sbjct: 218 KIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDD 277
Query: 342 EALRLFFA-MEAAGEVPDLVTVLSMISGCGQSGALE-LGKWFDNYACSGGLKDNVMVCNA 399
EA++ F M+ +G PD+ + S+IS C + G + G+ L+ VCNA
Sbjct: 278 EAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNA 337
Query: 400 LIDMYSKCGS---IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
LI MY++ + DA + F +L K VSW +M+ G + +G +AL F M ++
Sbjct: 338 LIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENV 397
Query: 457 RPNRVTFLAVLQACTHAGFLEKG 479
R + F A L++ + L+ G
Sbjct: 398 RTDEYAFSAALRSSSELAVLQLG 420
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 174/382 (45%), Gaps = 26/382 (6%)
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC--NDLKMAELVFRGIEEGLRTVVSWN 227
H SLLKS GV A N ++AY++ + L A VF + R VSWN
Sbjct: 14 HASLLKS--------GVAAPTP-WNQLLTAYSRSSPDGLAAARRVFDEVPR--RDEVSWN 62
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+++ ++ R M G + + S L S G + S +
Sbjct: 63 ALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKS 122
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
G +V + L+ +Y+KCG + AR +FDGM +R VSW A+I+GY + GD+ AL LF
Sbjct: 123 GLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELF 182
Query: 348 FAMEAAGEVPDLVTVLSMISGC-GQSGAL--ELGKWFDNYACSGGLKDNVMVCNALIDMY 404
ME G PD T S+++ G S L +L Y + GL V NA I Y
Sbjct: 183 LEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLT----VLNAAITAY 238
Query: 405 SKCGSIGDARELFYALPE-KTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVT 462
S+CGS+ D+R +F + + + ++SW M+ NG EA+ F +MM E + P+ +
Sbjct: 239 SQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYS 298
Query: 463 FLAVLQACTHAGFLE-KGWGYFNLMTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFV 519
F +++ +C+ G + +G L+ K + V P N M +++A
Sbjct: 299 FTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCF 358
Query: 520 QSMPIKSDAGIWGTLLCACKIH 541
S+ +K D W ++L H
Sbjct: 359 NSLVLK-DTVSWNSMLTGYSQH 379
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 253/440 (57%), Gaps = 2/440 (0%)
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
+H+ + +G+ +D V NT I+ Y+ C+ A V +G VSWN+II G +
Sbjct: 115 LHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHA 174
Query: 237 DKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVI 296
+ +L + M D T+++ L +C + G+L H+ + GF+++ +
Sbjct: 175 GLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMG 234
Query: 297 NTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV 356
++LISMY+KCG ++ AR +FDGM DR V WT+MISGY Q G EA++LF M+ AG
Sbjct: 235 SSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVK 294
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
D T+ +++S CGQ GAL+LG++ Y GL ++ V N+LIDMYSKCG I A ++
Sbjct: 295 VDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGF 475
F + ++ SW T+I G A NG EALDLF QM E + PN +TFL VL +C+H G
Sbjct: 355 FCGMVKRDNFSW-TVIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGL 413
Query: 476 LEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+E+G+ +F+ M+ +Y + P + HY CM DLLGR L EA F++ MPI DA +W +LL
Sbjct: 414 VEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLL 473
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
AC+ + + EYVA R+ LEP+ V ++ +YA RW +RT + + K
Sbjct: 474 FACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTK 533
Query: 596 FPGQSLVHINGKTCTFTVED 615
PG S + ++G F D
Sbjct: 534 QPGCSFIEVDGCVHEFFAGD 553
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 196/413 (47%), Gaps = 10/413 (2%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
+N + A++ + +H VK SD FV T+++MY+ C A +
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 113 DKMPD--RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKH 170
D P D SWN +I G+ G K L F M + D VT++ A
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
+ + K H+ + G + + + ++ IS YAKC ++ A +F G+ + R V W S+I
Sbjct: 212 MKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPD--RNAVCWTSMI 269
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
G T + +++ +R M G + D T+ +++SSC AL GR VH++ +G
Sbjct: 270 SGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLG 329
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
D+SV N+LI MYSKCGDI A +F GM R SWT +I G+A G EAL LF M
Sbjct: 330 KDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWT-VIMGFAANGLSGEALDLFAQM 388
Query: 351 EAAGEV-PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
E G V P+ +T L +++ C G +E G + F + G+ + ++D+ +
Sbjct: 389 EEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAK 448
Query: 409 SIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+ +A + +P V W +++ C GE A + ++ L+ PN+
Sbjct: 449 LLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLE--PNK 499
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 149/288 (51%), Gaps = 9/288 (3%)
Query: 253 GFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G+ P D ++ + LS+ ++V G +H+ + G D V+NTLI+MYS C +
Sbjct: 87 GYMPIDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPST 146
Query: 312 ARFLFD----GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
AR + D G D VSW +I+GY G ++AL+ F M + D VT+L+ +
Sbjct: 147 ARSVLDSAPKGASD--TVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALV 204
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C ++ +++GK + G + N + ++LI MY+KCG + DAR +F +P++ V
Sbjct: 205 ACARTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVC 264
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMT 487
WT+MI+G G+ EA+ LF M ++ + T V+ +C G L+ G Y +
Sbjct: 265 WTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGR-YVHAYC 323
Query: 488 KVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
++ + +++ + + D+ + G +K+A D M +K D W ++
Sbjct: 324 DIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGM-VKRDNFSWTVIM 370
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 149/289 (51%), Gaps = 14/289 (4%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
+S WN+ I + +KAL F +M K + +++T ACA+ ++
Sbjct: 158 ASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKL 217
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
H +V + F + ++ ++++ MYAKC +++ A ++FD MPDR+ W +MI G+ Q+G
Sbjct: 218 CHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQ 277
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + LF +M++ G++ D T+ + + L L + VH++ G+ D+SV N+
Sbjct: 278 SKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNS 337
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD-GF 254
I Y+KC D+K A +F G+ + R SW I+G G ++L+ + M + G
Sbjct: 338 LIDMYSKCGDIKKAYDIFCGMVK--RDNFSWTVIMGFAANGLS-GEALDLFAQMEEEGGV 394
Query: 255 RPDVTTVVSLLSSCVCPEALVQG-----RLVHSHGI-----HYGFDLDV 293
P+ T + +L+SC + QG R+ +GI HYG +D+
Sbjct: 395 MPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDL 443
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 184/606 (30%), Positives = 303/606 (50%), Gaps = 23/606 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ I A+ +F M + PN+ TF + AC+ L D + H I
Sbjct: 195 WNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERI 254
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+++ F S +FV ++V+MY KC +D A +F+KM R+V SW MI +AQ GF+
Sbjct: 255 IRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAF 314
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L+ M + + VT M + + + + L + +H+ + G D+D + ++ Y
Sbjct: 315 DLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMY 371
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC + A +F ++E V+WN++I G + +L + M +G RP+ T
Sbjct: 372 GKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVT 431
Query: 261 VVSLLSSCVCPEALVQGRLVHS----HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
++ L +C L +GR +H+ IH + ++ N +I+MY KCG +D A F
Sbjct: 432 YLASLEACSSLNDLTRGRQLHARILLENIH-----EANLSNAVINMYGKCGSLDEAMDEF 486
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
M +R VSW MI+ YAQ G +AL F M+ G D T L I CG +L
Sbjct: 487 AKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLA 546
Query: 377 LGKWFDNYACSGG--LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LGK + + L+ + V AL+ MY++CGS+ DA+ +F+ + +V+W+ +IA
Sbjct: 547 LGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAA 606
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
CA +G EALDLF +M +P+ +TF ++ AC+ G ++ G YF M + Y +
Sbjct: 607 CAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPA 666
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL 554
+H+ M DLLGR G L+EA ++ P A LL AC +H ++E G +A
Sbjct: 667 SEDHFGGMVDLLGRAGWLEEAEQVMRKNPC---ALAHAVLLGACHVHGDVERGIRIAQSA 723
Query: 555 FELEPHSAAPYVE----MANIYALGGRWDGVANLRTMMKRNQVKKFP-GQSLVHINGKTC 609
EL+ ++A + +A +Y GRW+ A +R ++ ++ P G+S + + +
Sbjct: 724 LELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVKNRVH 783
Query: 610 TFTVED 615
F +D
Sbjct: 784 EFGEDD 789
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 259/502 (51%), Gaps = 14/502 (2%)
Query: 44 RMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD 103
++KK+ + + + C + +++H HI+ S + ++Q ++ MYAKC
Sbjct: 16 QLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCG 75
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
L+ A ++F+ +P+ +V SW A+I +A+ G L +VL LF M+L G + D +
Sbjct: 76 CLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLT 135
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A A L+ K++H + G++ V V N ++ Y KC + A+ VF + E R +
Sbjct: 136 ACSSAGALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPE--RNL 192
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VSWN++I D++ + M DG RP+ T VS++ +C L +G+ H
Sbjct: 193 VSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHE 252
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
I GFD + V N+L++MY KCG +D AR +F+ M R VSWT MI YAQ+G +
Sbjct: 253 RIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRA 312
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A L+ M+ P+ VT ++++ C + L + + + G + ++ L+
Sbjct: 313 AFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVT 369
Query: 403 MYSKCGSIGDARELFYALPEKT--VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
MY KCGS+ A +F L E++ V+W MI+G A +GE +AL+ F +M +RPN
Sbjct: 370 MYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNS 429
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN-PELNHYSCMADLLGRKGKLKEALDFV 519
VT+LA L+AC+ L +G L ++ N E N + + ++ G+ G L EA+D
Sbjct: 430 VTYLASLEACSSLNDLTRG---RQLHARILLENIHEANLSNAVINMYGKCGSLDEAMDEF 486
Query: 520 QSMPIKSDAGIWGTLLCACKIH 541
MP + D W T++ H
Sbjct: 487 AKMP-ERDVVSWNTMIATYAQH 507
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 287/609 (47%), Gaps = 48/609 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + L LFR+M+ + +P+ F + AC+ + IH V
Sbjct: 95 WTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCAV 154
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ + + V +V++Y KC R+ A +F+++P+R++ SWNA+I AQ G + +
Sbjct: 155 LAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQ 213
Query: 142 LFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F+ M L G ++ + T + + A + L KS H I G D+ + V N+ ++ Y
Sbjct: 214 VFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMY 273
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KC + A LVF + R VVSW +I + + Y+ M + P+ T
Sbjct: 274 GKCGSVDRARLVFEKMSS--RNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVT 328
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++++ SC+ PE L + +H+H + GFD D + L++MY KCG +DSA +F+ +
Sbjct: 329 FMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLK 388
Query: 321 DRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+R+ V+W AMISG AQ G+ +AL F+ ME G P+ VT L+ + C L G
Sbjct: 389 ERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRG 448
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + + + NA+I+MY KCGS+ +A + F +PE+ VVSW TMIA A +
Sbjct: 449 RQLHARILLENIHE-ANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQH 507
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQAC-----------------THAGFLEKGWG 481
G +AL+ F QM +R T+L + AC T A LE+ G
Sbjct: 508 GSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPG 567
Query: 482 YFNLMTKVYQVNPELNH---------------YSCMADLLGRKGKLKEALDFVQSMPI-- 524
+ +Y L+ +S + + G+ EALD + M +
Sbjct: 568 VATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQG 627
Query: 525 -KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS-AAPYVEMANIYALGGRWDGVA 582
K DA + TL+ AC R + + V Y + +E +S A + L GR +
Sbjct: 628 TKPDALTFSTLVAACS--RRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLE 685
Query: 583 NLRTMMKRN 591
+M++N
Sbjct: 686 EAEQVMRKN 694
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
RS+ WN+ I E+ +AL F +M+ + PN++T+ +AC+ L+D +
Sbjct: 390 RSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGR 449
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H I+ + + +++MY KC LD A F KMP+RDV SWN MI +AQ G
Sbjct: 450 QLHARILLENI-HEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHG 508
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG--VDADVSV 192
+ L F M L G D T +G A L+L K++HS ++ D V
Sbjct: 509 SGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGV 568
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
++ YA+C L A+ VF R +V+W+++I C + +++L+ +R M
Sbjct: 569 ATALVTMYARCGSLHDAKSVF--WRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQ 626
Query: 253 GFRPDVTTVVSLLSSC 268
G +PD T +L+++C
Sbjct: 627 GTKPDALTFSTLVAAC 642
>gi|302782902|ref|XP_002973224.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
gi|300158977|gb|EFJ25598.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
Length = 546
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 286/549 (52%), Gaps = 8/549 (1%)
Query: 45 MKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDR 104
M I PN++TF +I AC+ L D + IH +V + +D V T ++ MY+KC++
Sbjct: 1 MDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEK 60
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA 164
L A K+FD + +DV SW A+I F+Q+G L LF+ M L G++ + T + + A
Sbjct: 61 LGDAKKVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAA 120
Query: 165 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+ L ++ I G ADV V +T ++ Y++ +L A+ F + E ++
Sbjct: 121 CTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLRE--KSTG 178
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
SWN+I+ +++ Y+ M G PD T V LL +C AL +G +H+
Sbjct: 179 SWNAIVRAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHAR- 237
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
G D + +++MY+KCG I+ A F M V W A+I+GY Q EAL
Sbjct: 238 --MGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEAL 295
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
L+ AM G D+ T S++ C + L G+ SGGL+ V + N L++M+
Sbjct: 296 DLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMF 355
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
+KCGS+ A E+F + + VSW +M+ +GE A +LF +M+ P+ TF
Sbjct: 356 AKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFT 415
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ-SMP 523
++L C+H+G L+ G+GYF M + + P HY C+ DLLGR G + A V+ + P
Sbjct: 416 SILNFCSHSGLLQDGFGYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEHAFP 475
Query: 524 IKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVAN 583
A W +LL AC+ +RN+EI L + P + AP V++AN+ A GRWD V
Sbjct: 476 GSVIA--WTSLLAACRTYRNVEIAARATEELMRVRPENPAPLVQLANLCAEAGRWDAVER 533
Query: 584 LRTMMKRNQ 592
++ MM+ ++
Sbjct: 534 VKRMMEEHR 542
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 216/465 (46%), Gaps = 15/465 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + W + I AL LF M + ++PN TF I AC +
Sbjct: 72 RRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGD 131
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++ + + +D+FV +T V MY++ L A FD + ++ SWNA++ + Q G
Sbjct: 132 KLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHG 191
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + + L+ M + G + D T + L A L + +H+ +G D +
Sbjct: 192 HISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGS 248
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
++ YAKC ++ A F + VV WN++I G G+ + ++L+ Y M +G
Sbjct: 249 AIVAMYAKCGGIEHAMTAFTKMSSS--NVVVWNALIAGYVQGEHWQEALDLYHAMNLEGL 306
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
D+ T S+L +C + L +GR VH+ + G ++ V + N L++M++KCG + A
Sbjct: 307 EADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCGSLTLALE 366
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F GM R VSW +M++ + Q G+ A LF M G P T S+++ C SG
Sbjct: 367 MFRGMASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFTSILNFCSHSGL 426
Query: 375 LE--LGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKTVVSWTT 430
L+ G +FD G D C +ID+ + G I A ++ +A P +V++WT+
Sbjct: 427 LQDGFGYFFDMVDEFGIAPVDEHYRC--VIDLLGRTGHIAAAEKMVEHAFP-GSVIAWTS 483
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRP-NRVTFLAVLQACTHAG 474
++A C A ++M +RP N + + C AG
Sbjct: 484 LLAACRTYRNVEIAARATEELMR--VRPENPAPLVQLANLCAEAG 526
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 178/480 (37%), Positives = 265/480 (55%), Gaps = 17/480 (3%)
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ L+ M L+G+ D T+ L +A + +H+ I G+ +++ V NT +
Sbjct: 122 IFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMR 181
Query: 199 AYAKCNDLKMAELVFRGIEEGLR-TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
YA ++ E VF ++G ++SW ++I + + + I FR +
Sbjct: 182 FYAVSGFIEAVEKVF---DQGPHWDLISWTTLIQAYS-------KMGYPSEAIAAFFRMN 231
Query: 258 VT----TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDS 311
T T+V +LS+C G+ + ++ H+ FD+ DV + N L+ MY KCG
Sbjct: 232 CTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHL 291
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR LF M + VSW +MISG A +G EAL +F M+ G PD VT++ +++ C
Sbjct: 292 ARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCAN 351
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
G LELGKW +Y +K + V NAL+DMY+KCGSI A +F A+ K V S+T M
Sbjct: 352 LGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAM 411
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
I G A++G+ AL +F +M + +RP+ VT + VL AC+HAG LE+G +F M+++Y
Sbjct: 412 IVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYH 471
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVA 551
+ P+ HY CM DLLGR G + EA F MPI DA +WG+LL ACKIH +E+GE V
Sbjct: 472 LQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVI 531
Query: 552 YRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+L E+EP Y+ M+NIY+ RW R MK+N +KK PG S + ++G F
Sbjct: 532 QKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEF 591
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 216/424 (50%), Gaps = 11/424 (2%)
Query: 41 LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYA 100
L+R+M + P+ T P++ KAC++ F+ + IH H +K+ S++FV+ T++ YA
Sbjct: 125 LYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYA 184
Query: 101 KCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMG 160
++ K+FD+ P D+ SW +I +++MG+ + + F+ M AD +T++
Sbjct: 185 VSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCT---ADRMTLVV 241
Query: 161 LTQAAIHAKHLSLLKSVHSFGIH--IGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ A +L K + ++ H V +DV + N + Y KC +A +F +
Sbjct: 242 VLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMP- 300
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
++ +VSWNS+I G + F ++L+ +R M G +PD T+V +L+SC L G+
Sbjct: 301 -VKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGK 359
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
VHS+ D V N L+ MY+KCG ID A +F M + S+TAMI G+A G
Sbjct: 360 WVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHG 419
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVC 397
D AL +F M G PD VT++ ++S C +G LE G + F + + L+
Sbjct: 420 KADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHY 479
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDL 456
++D+ + G I +A +P S W +++ C ++ + + +++E++
Sbjct: 480 GCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEME- 538
Query: 457 RPNR 460
P R
Sbjct: 539 -PER 541
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 11/308 (3%)
Query: 223 VVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
V +N+II T + F + YR M+ G PD T+ LL +C A ++ +H
Sbjct: 102 VYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIH 161
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+H I G ++ V NTL+ Y+ G I++ +FD +SWT +I Y++ G
Sbjct: 162 AHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPS 221
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK----WFDNYACSGGLKDNVMVC 397
EA+ FF M + LV VL S C Q G LGK + D++ + +V +
Sbjct: 222 EAIAAFFRMNCTADRMTLVVVL---SACSQLGDFTLGKKILAYMDHHLFD--VHSDVFLG 276
Query: 398 NALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR 457
NAL+DMY KCG AR+LF+ +P K +VSW +MI+G A G F EAL +F +M + L+
Sbjct: 277 NALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLK 336
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALD 517
P+ VT + VL +C + G LE G + + K + + + + + D+ + G + +A
Sbjct: 337 PDSVTLVGVLNSCANLGDLELGKWVHSYIDKNH-MKADGYVANALVDMYAKCGSIDQAFM 395
Query: 518 FVQSMPIK 525
Q+M K
Sbjct: 396 VFQAMKCK 403
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 133/259 (51%), Gaps = 7/259 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I+ +A+ F RM + + +T + AC++L DF + I ++
Sbjct: 207 WTTLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAYMD 263
Query: 82 KSPF--WSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
F SD+F+ ++DMY KC + A +LF MP +++ SWN+MI G A G ++
Sbjct: 264 HHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEA 323
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L +F M+ +G++ D VT++G+ + + L L K VHS+ + AD V N +
Sbjct: 324 LHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDM 383
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
YAKC + A +VF+ ++ + V S+ ++I G K D +L + M G RPD
Sbjct: 384 YAKCGSIDQAFMVFQAMK--CKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHV 441
Query: 260 TVVSLLSSCVCPEALVQGR 278
T+V +LS+C L +GR
Sbjct: 442 TLVGVLSACSHAGLLEEGR 460
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 182/582 (31%), Positives = 295/582 (50%), Gaps = 4/582 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + H A M ++ N + + AC + + IH V
Sbjct: 188 WNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAV 247
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + + + +VDMY K ++ + ++FD M +++ SWN+ I F GF VL
Sbjct: 248 KVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLR 307
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M + +T+ L A + L + VH + I +D D+ V N+ + YA
Sbjct: 308 MFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYA 367
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
K L+ A +F +++ R VVSWN++I ++ M G P+ T+
Sbjct: 368 KFGSLEKASTIFEQMKD--RNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITL 425
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V++L +C +L G+ +H+ I G D+ + N LI MYSKCG + AR +F+ +
Sbjct: 426 VNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE-RSE 484
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ VS+ +I GY+Q E+L LF M + G D V+ + +S C + GK
Sbjct: 485 KDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEI 544
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
L + + N+L+D+Y+K G + A ++F + +K V SW TMI G ++G+
Sbjct: 545 HCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQI 604
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
A +LF M L + V+++AVL AC+H G ++KG YF+ M + P+ HY+C
Sbjct: 605 DIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMV-AQNIEPQQMHYAC 663
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
M DLLGR G+L + + ++ MP +++ +WG LL AC+IH NIE+ ++ A LFEL+P
Sbjct: 664 MVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEH 723
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
+ Y M N+YA GRW+ +R +MK +V+K P S V
Sbjct: 724 SGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQ 765
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 167/558 (29%), Positives = 276/558 (49%), Gaps = 13/558 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ--MIHGH 79
WNS R + +AL ++ M ++ + P++ TFPF A A + +H
Sbjct: 85 WNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHAS 144
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
++ +D+F T+V YA C + A ++FD+MP+RDV SWN+++ F G
Sbjct: 145 ALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDA 204
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+M G + +++ + A + S+H+ + +G++ V++ N +
Sbjct: 205 RRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDM 264
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y K D++ + VF G+ E + VSWNS IG + D L +R M P
Sbjct: 265 YGKFGDVEASMQVFDGMLE--QNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSI 322
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+ SLL + V + GR VH + I DLD+ V N+L+ MY+K G ++ A +F+ M
Sbjct: 323 TLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQM 382
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
DR VSW AMI+ Q G EA RL M+ +GE P+ +T+++++ C + +L++GK
Sbjct: 383 KDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGK 442
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
++ GL ++ + NALIDMYSKCG + AR +F EK VS+ T+I G + +
Sbjct: 443 QIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSP 501
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNH 498
E+L LF QM + + + V+F+ L ACT+ + G + L+ ++ +P L++
Sbjct: 502 WCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN 561
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+ DL + G L A + K D W T++ +H I+I A+ LFEL
Sbjct: 562 --SLLDLYTKGGMLVTASKIFNKI-TKKDVASWNTMILGYGMHGQIDI----AFELFELM 614
Query: 559 PHSAAPYVEMANIYALGG 576
Y ++ I L
Sbjct: 615 KGDGLDYDHVSYIAVLAA 632
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 5/310 (1%)
Query: 174 LKSVHSFGIHIGVDA-DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
L+ H+ + G A + + + +YA +DL A LV R LR+ WNS+
Sbjct: 32 LRRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRA 91
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ--GRLVHSHGIHYGFD 290
+ ++L Y M+ RPD T L + A + G +H+ + G
Sbjct: 92 LSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHL 151
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
DV NTL++ Y+ CG AR +FD M +R VSW +++S + G +A R +M
Sbjct: 152 ADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSM 211
Query: 351 EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+G ++ +++S++ CG + G A GL V + NAL+DMY K G +
Sbjct: 212 MRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDV 271
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFV-EALDLFHQMMELDLRPNRVTFLAVLQA 469
+ ++F + E+ VSW + I GC LN F + L +F +M E ++ P +T ++L A
Sbjct: 272 EASMQVFDGMLEQNEVSWNSAI-GCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPA 330
Query: 470 CTHAGFLEKG 479
G + G
Sbjct: 331 LVELGSFDLG 340
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 3/254 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + WN+ I V +A L M+K+ PN++T + ACA+++ +
Sbjct: 383 KDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGK 442
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IH ++ D+F+ ++DMY+KC +L A +F++ ++D S+N +I+G++Q
Sbjct: 443 QIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSP 501
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ + L LF MR VGI D V+ MG A + K +H + + + N
Sbjct: 502 WCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN 561
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ + Y K L A +F I + + V SWN++I G + D + + M DG
Sbjct: 562 SLLDLYTKGGMLVTASKIFNKITK--KDVASWNTMILGYGMHGQIDIAFELFELMKGDGL 619
Query: 255 RPDVTTVVSLLSSC 268
D + +++L++C
Sbjct: 620 DYDHVSYIAVLAAC 633
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 287/571 (50%), Gaps = 11/571 (1%)
Query: 50 IEPNNLTF---PFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLD 106
+ PN+L ++ C++L ++Q+I + +P S F+ +V+MY+K DR +
Sbjct: 4 LSPNSLASLVESAVSTQCSRLGRAAHAQIIK--TLDNPLPS--FIYNHLVNMYSKLDRPN 59
Query: 107 CAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAI 166
A L P+R V +W A+I G Q G L F NMR IQ + T +A+
Sbjct: 60 SAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASG 119
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
+ + K VH+ + G +DV V + Y+K + A +F + E R + +W
Sbjct: 120 SLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPE--RNIATW 177
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH 286
N+ + ++DD+L + ++G+ P++ T + L++C L GR +H +
Sbjct: 178 NAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQ 237
Query: 287 YGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRL 346
GF+ DVSV N LI Y KC + + +F G+ VSW +MI Y Q + ++A +
Sbjct: 238 SGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLV 297
Query: 347 FFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
F G P V S++S C LE+GK A + N+ V +AL+DMY K
Sbjct: 298 FLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGK 357
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLR--PNRVTFL 464
CGSI DA F +PE+ +V+W MI G A G+ A+ LF +M R PN VTF+
Sbjct: 358 CGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFV 417
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
VL AC+ AG + G F M Y + P HY+C+ DLLGR G +++A F++ MPI
Sbjct: 418 CVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPI 477
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ +WG LL A K+ E+G+ A LFEL+P + +V ++N++A GRW+ +
Sbjct: 478 RPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLV 537
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R MK +KK G S + F +D
Sbjct: 538 RKEMKDVGIKKGAGCSWITAGNAVHVFQAKD 568
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 211/427 (49%), Gaps = 6/427 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W + I +V AL F M+++ I+PN+ TFP KA L L + +H
Sbjct: 72 SVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVH 131
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
VK+ SD+FV + DMY+K + A K+FD+MP+R++A+WNA + G +
Sbjct: 132 ALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYD 191
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
L F R G + + +T A A +L L + +H F + G +ADVSV N I
Sbjct: 192 DALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLI 251
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC+ + +E++F GI + VSW S+I D+ + + + +G P
Sbjct: 252 DFYGKCHQVGCSEIIFSGISK--PNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPT 309
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
V S+LS+C L G+ VH+ + ++ V + L+ MY KCG I+ A FD
Sbjct: 310 DFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFD 369
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--VPDLVTVLSMISGCGQSGAL 375
M +R V+W AMI GYA +G D A+ LF M P+ VT + ++S C ++G++
Sbjct: 370 EMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSV 429
Query: 376 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIA 433
+G + F++ G++ ++D+ + G + A + +P + VS W ++
Sbjct: 430 NVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLG 489
Query: 434 GCALNGE 440
+ G+
Sbjct: 490 ASKMFGK 496
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 186/523 (35%), Positives = 270/523 (51%), Gaps = 11/523 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGI----QA 153
MYAK L A KLFD+MP RD SWN MI GF + G + F M+ +G QA
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60
Query: 154 DFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
T++ +A L + K VH + G ++SV N I++Y KC V
Sbjct: 61 TLTTIL----SACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQV 116
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + E R V++W +II G + + DSL + M P+ T +S L +C +
Sbjct: 117 FDEMLE--RNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQ 174
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL +G +H G D V + L+ MYSKCG + +F+ +VS T +++
Sbjct: 175 ALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILA 234
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
G+AQ G +EA++ F M AG D V +++ G +L LG+ +
Sbjct: 235 GFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGS 294
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
N V N LI+MYSKCG + D+ ++F +P VSW +MIA A +G+ AL L+ +M
Sbjct: 295 NPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMR 354
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ P VTFL++L AC+H G +EKG + MT+V+++ P + HY+C+ D+LGR G L
Sbjct: 355 LKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLL 414
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIY 572
EA F++ +PIK D +W LL AC IH + E+G+Y A L P +PY+ +ANIY
Sbjct: 415 NEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIY 474
Query: 573 ALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ GRW A MK V K G S + I +F VED
Sbjct: 475 SSKGRWKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVED 517
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 186/435 (42%), Gaps = 31/435 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDI-EPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN I + F++M+ + T I AC + ++M+H
Sbjct: 26 WNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILSACDRPELGFVNKMVHCLA 85
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V + F +I V ++ Y KC ++FD+M +R+V +W A+I G Q L
Sbjct: 86 VLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIISGLVQSELYRDSL 145
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M ++ + +T + A + L +H +G+ +D V + + Y
Sbjct: 146 RLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKLGLQSDFCVESALMDMY 205
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC + +F G VS I+ G ++++ F+ M+ G D
Sbjct: 206 SKCGSMGDTLQIFE--SAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNM 263
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V ++L +L G+ +HS I F + V N LI+MYSKCGD++ + +F M
Sbjct: 264 VSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMP 323
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
VSW +MI+ +A+ GD AL+L+ M G P VT LS++ C G +E G
Sbjct: 324 CMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGME 383
Query: 381 F--------------DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-V 425
F ++YAC ++DM + G + +A+ LP K V
Sbjct: 384 FLKSMTEVHKLTPRMEHYAC-------------VVDMLGRAGLLNEAKTFIEGLPIKPDV 430
Query: 426 VSWTTMIAGCALNGE 440
+ W ++ C ++G+
Sbjct: 431 LVWQALLGACGIHGD 445
>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
Length = 779
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 291/554 (52%), Gaps = 9/554 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I + + L RM+++ + P +T+ + AC+ D + IH +V
Sbjct: 226 WNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVV 285
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
D V++ ++ MY KC L+ + ++ +R+ +WN +I +A+ + L
Sbjct: 286 DMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALR 345
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+L G++AD VT + + HL+ +H + +G ++ + V N+ + YA
Sbjct: 346 SFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVHNSLTAMYA 404
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A +F E R VSWNS++ D+ F++ M +G RPD T
Sbjct: 405 KCGSLDAARKMFE--EMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTC 462
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+S+L +C +G +H + GFD V N LI MY+K GD ++AR +FD M +
Sbjct: 463 ISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAE 522
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC-GQSGALELGKW 380
R VSW +++ Y +KG +A+ +F+ M+ A D VT ++ + C G +G L GK
Sbjct: 523 RNTVSWNTILAAYVEKGLNRDAVEMFWKMDVA---RDKVTYVAALDACSGLAGGLAHGKL 579
Query: 381 FDNYACSGGLKD--NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
Y G + + + AL++MY KCGS+ +AR++F + + VV+WT++I A +
Sbjct: 580 IHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGMLHRDVVTWTSLIVAYAQH 639
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
E +AL L M + ++ + V FL++L C H+G LE+G YF M Y ++P L H
Sbjct: 640 SEIEQALKLVKIMEQEGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEH 699
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+C+ D+LGR G L A V +P +SD+ +W TLL AC++H N E G+ A R+ L+
Sbjct: 700 YNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLLD 759
Query: 559 PHSAAPYVEMANIY 572
P A YV ++NIY
Sbjct: 760 PSIPAAYVVLSNIY 773
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 261/514 (50%), Gaps = 19/514 (3%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+++LLFR+M+ I PN +T + +AC L+D + +HG+++++ D + +V
Sbjct: 144 ESVLLFRKMELEGIRPNLITMVAVLRAC-NLTD---GRQVHGYVLEAGMSLDTSLGNALV 199
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
DMY K +D A + +MP RDV SWN MI G+AQ G ++ L + M+ G+ V
Sbjct: 200 DMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKV 259
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T L A + L KS+H + +G+D D V + + Y KC L+ + +
Sbjct: 260 TYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEV 319
Query: 217 EEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
E R ++WN+IIG Y D F +L ++ M +G + D T V +L +C P L
Sbjct: 320 HE--RNTIAWNTIIGAYARYSDHF-QALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLA 376
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
QG L+H GF+ + V N+L +MY+KCG +D+AR +F+ M R VSW +++S
Sbjct: 377 QGILLHDWISQLGFE-SIIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAI 435
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q G +A + F M+ G PD VT +SM+ C + + G G
Sbjct: 436 QHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTG 495
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V NALI MY+K G AR +F A+ E+ VSW T++A G +A+++F +M D
Sbjct: 496 VANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM---D 552
Query: 456 LRPNRVTFLAVLQACTH-AGFLEKG---WGYFNLMTKVYQVNPELNHYSCMADLLGRKGK 511
+ ++VT++A L AC+ AG L G GY ++ + + + + ++ G+ G
Sbjct: 553 VARDKVTYVAALDACSGLAGGLAHGKLIHGY--MLDHGFSNRLDTVAATALVNMYGKCGS 610
Query: 512 LKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
L+EA M + D W +L+ A H IE
Sbjct: 611 LQEARKIFDGM-LHRDVVTWTSLIVAYAQHSEIE 643
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 248/481 (51%), Gaps = 15/481 (3%)
Query: 2 AASSLPPRLNKIYRSSTINQWNSQIRE-AVDKNEAHKALLLFRRMKKNDIEPNNLTFPFI 60
AAS + +L+ ++ + W++ + A +N+A +AL L++RM+ + P+++TF
Sbjct: 10 AASEVFGKLDPLH----VAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSVTFVTC 65
Query: 61 AKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
KAC + +H HI + +DI+ +++MY KC + A++LF +M +V
Sbjct: 66 LKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNV 125
Query: 121 ASWNAMIVGFAQMGFL--EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
SW ++I FAQ G L E VL LF M L GI+ + +T++ A + A +L+ + VH
Sbjct: 126 VSWTSVIGNFAQYGHLGRESVL-LFRKMELEGIRPNLITMV----AVLRACNLTDGRQVH 180
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
+ + G+ D S+ N + Y K + A++V R + + R V+SWN +I G
Sbjct: 181 GYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPK--RDVISWNIMISGYAQSGD 238
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+ L M DG P T +LL++C E L +G+ +H + G D D V +
Sbjct: 239 CKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSF 298
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+ MY KCG ++ + + +R ++W +I YA+ D +ALR F M+ G D
Sbjct: 299 LLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKAD 358
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
VT + M+ C L G ++ G ++++V N+L MY+KCGS+ AR++F
Sbjct: 359 AVTFVLMLGTCSSPAHLAQGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMFE 417
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+P + VSW ++++ +G +A F +M RP+ VT +++L ACT ++
Sbjct: 418 EMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKE 477
Query: 479 G 479
G
Sbjct: 478 G 478
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 219/446 (49%), Gaps = 11/446 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM-GFLEKVLCLFYNMRLVGIQADFV 156
MY KC LD A ++F K+ VA+W+A++ +A + L L+ M+L G++ D V
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + +A L + VH+ +G++ D+ N I+ Y KC + A +F +
Sbjct: 61 TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120
Query: 217 EEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
E VVSW S+IG YG +S+ +R M +G RP++ T+V++L +C L
Sbjct: 121 ES--PNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLT 174
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
GR VH + + G LD S+ N L+ MY K G +D A + M R +SW MISGYA
Sbjct: 175 DGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYA 234
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q GD E LR + M+ G P VT ++++ C L GK GL + +
Sbjct: 235 QSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEV 294
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V + L+ MY KCGS+ D + + E+ ++W T+I A + +AL F QM
Sbjct: 295 VKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEG 354
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++ + VTF+ +L C+ L +G + ++++ + H S A + + G L A
Sbjct: 355 VKADAVTFVLMLGTCSSPAHLAQGILLHDWISQL-GFESIIVHNSLTA-MYAKCGSLDAA 412
Query: 516 LDFVQSMPIKSDAGIWGTLLCACKIH 541
+ MP ++ W +L+ A H
Sbjct: 413 RKMFEEMPSRNSVS-WNSLMSAAIQH 437
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 291/558 (52%), Gaps = 30/558 (5%)
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM- 146
++F + ++ A + +LF MP+RD S+NA+I GF+ G + + L+ +
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 147 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
R ++ +T+ + A +L SVH + +G A V + + YAK +
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 207 KMAELVFRGIE-----------------------EGL------RTVVSWNSIIGGCTYGD 237
+ A VF+ +E +GL R ++W +++ G T
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 238 KFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN 297
++L+ +R M +G D T S+L++C A +G+ +H++ ++ +V V +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGS 317
Query: 298 TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP 357
L+ MYSKC I A +F M R +SWTAMI GY Q +EA+R F M+ G P
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T+ S+IS C +LE G F A GL + V NAL+ +Y KCGSI DA LF
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+ VSWT ++ G A G+ E +DLF +M+ L+P+ VTF+ VL AC+ AG +E
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVE 497
Query: 478 KGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
KG YF+ M K + + P +HY+CM DL R G+ KEA +F++ MP DA W TLL +
Sbjct: 498 KGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 538 CKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFP 597
C++ N+EIG++ A L E +P + A YV + +++A G+W VA+LR M+ QVKK P
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 598 GQSLVHINGKTCTFTVED 615
G S + K F+ +D
Sbjct: 618 GCSWIKYKNKVHIFSADD 635
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 221/481 (45%), Gaps = 49/481 (10%)
Query: 1 MAASSLPPRLNKIYRSSTIN---QWNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLT 56
+A S L P + +++ S +N+ I +++ L+R + ++ + P +T
Sbjct: 89 LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK--------------- 101
+ + LSD +H +++ F + FV + +VDMYAK
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208
Query: 102 ----------------CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYN 145
C ++ A LF M DRD +W M+ G Q G + L +F
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268
Query: 146 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCND 205
MR G+ D T + A K +H++ + +V V + + Y+KC
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS 328
Query: 206 LKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL 265
+++AE VFR + R ++SW ++I G ++++ + M DG +PD T+ S++
Sbjct: 329 IRLAEAVFRRMT--CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVI 386
Query: 266 SSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRV 325
SSC +L +G H + G ++V N L+++Y KCG I+ A LFD M +V
Sbjct: 387 SSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 446
Query: 326 SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNY 384
SWTA+++GYAQ G E + LF M G PD VT + ++S C ++G +E G +FD+
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSM 506
Query: 385 ACSGGLKDNVMVC-----NALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
KD+ +V +ID+YS+ G +A E +P W T+++ C L
Sbjct: 507 Q-----KDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLR 561
Query: 439 G 439
G
Sbjct: 562 G 562
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 45/364 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + + +AL +FRRM+ + + TF I AC L+ + IH +I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYIT 305
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ + ++FV + +VDMY+KC + A +F +M R++ SW AMIVG+ Q E+ +
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M++ GI+ D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ A +F E VSW +++ G K ++++ + M+ +G +PD T
Sbjct: 426 KCGSIEDAHRLFD--EMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTF 483
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +LS+C S+ G ++ FD M
Sbjct: 484 IGVLSAC-----------------------------------SRAGLVEKGCDYFDSMQK 508
Query: 322 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ +T MI Y++ G EA M + PD +++S C G +E
Sbjct: 509 DHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNME 565
Query: 377 LGKW 380
+GKW
Sbjct: 566 IGKW 569
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 256/455 (56%), Gaps = 3/455 (0%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L ++ I AK L K +H+ +G+ ++ + ++ Y+ CN L+ A +F I +G
Sbjct: 64 LLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKG- 122
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+ WN +I + + +++ Y M+ G +PD T+ +L +C + +GR++
Sbjct: 123 -NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVI 181
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H I G++ DV V L+ MY+KCG + AR +FD + DR V W +M++ YAQ G
Sbjct: 182 HERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHP 241
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
DE+L L M A G P T++++IS L G+ + G + N V AL
Sbjct: 242 DESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTAL 301
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
IDMY+KCGS+ A LF L EK VVSW +I G A++G VEALDLF +MM+ + +P+
Sbjct: 302 IDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDH 360
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+TF+ L AC+ L++G +NLM + ++NP + HY+CM DLLG G+L EA D ++
Sbjct: 361 ITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIR 420
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
M + D+G+WG LL +CK H N+E+ E +L ELEP + YV +AN+YA G+W+G
Sbjct: 421 QMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEG 480
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
VA LR +M +KK S + + K F D
Sbjct: 481 VARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGD 515
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 233/526 (44%), Gaps = 52/526 (9%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
N+ + + ++C + +H + + ++ + T +V+ Y+ C+ L A+ LF
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
DK+P ++ WN +I +A G E + L++ M G++ D T+ + +A +
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+ +H I G + DV V + YAKC + A VF I + R V WNS++
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVD--RDAVLWNSMLAA 234
Query: 233 CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
D+SL+ M G RP T+V+++SS L GR +H G +GF +
Sbjct: 235 YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYN 294
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
V LI MY+KCG + A LF+ + ++ VSW A+I+GYA G EAL LF M
Sbjct: 295 DKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK 354
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
+ PD +T + ++ C + L+ G+ N+MV + I+
Sbjct: 355 EAQ-PDHITFVGALAACSRGRLLDEGRAL----------YNLMVRDCRIN---------- 393
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
TV +T M+ G+ EA DL QM D+ P+ + A+L +C
Sbjct: 394 ----------PTVEHYTCMVDLLGHCGQLDEAYDLIRQM---DVMPDSGVWGALLNSCKT 440
Query: 473 AGFLEKGWGYFNLMTKVYQVNP-ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 531
G +E + K+ ++ P + +Y +A++ + GK + Q M D GI
Sbjct: 441 HGNVELAE---VALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLM---IDKGIK 494
Query: 532 GTLLCACKIHRNIEIGEYVAYRLFELE---PHSAAPYVEMANIYAL 574
+ C+ IE+ V Y + P+S A Y E+ + L
Sbjct: 495 KNIACSW-----IEVKNKV-YAFLSGDVSHPNSGAIYAELKRLEGL 534
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 169/363 (46%), Gaps = 46/363 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN IR A+ L+ +M + ++P+N T PF+ KAC+ LS ++IH ++
Sbjct: 127 WNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVI 186
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+S + D+FV +VDMYAKC + A +FDK+ DRD WN+M+ +AQ G ++ L
Sbjct: 187 RSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLS 246
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L M G++ T++ + ++ L + +H FG G + V I YA
Sbjct: 247 LCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYA 306
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +K+A ++F + E + VVSWN+II G ++L+ + M+ + +PD T
Sbjct: 307 KCGSVKVACVLFERLRE--KRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITF 363
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V L++C +GRL +D R L++ M
Sbjct: 364 VGALAAC------SRGRL-----------------------------LDEGRALYNLMVR 388
Query: 322 RTRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
R++ +T M+ G LDEA L M+ +PD ++++ C G +E
Sbjct: 389 DCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDV---MPDSGVWGALLNSCKTHGNVE 445
Query: 377 LGK 379
L +
Sbjct: 446 LAE 448
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R + WN+ I A +AL LF RM K + +P+++TF AC++ +
Sbjct: 322 REKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLLDEGR 380
Query: 75 MIHGHIVKSPFWSDIFVQ-TTMVDMYAKCDRLDCAYKLF---DKMPDRDVASWNAMIVGF 130
++ +V+ + T MVD+ C +LD AY L D MPD V W A++
Sbjct: 381 ALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGV--WGALLNSC 438
Query: 131 AQMGFLE 137
G +E
Sbjct: 439 KTHGNVE 445
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 308/613 (50%), Gaps = 14/613 (2%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR +++ WN+ + +A L R M + N ++ A
Sbjct: 54 PRRDEV-------SWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVA 106
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +KS +++F + ++D+YAKC R+ A ++FD MP+R+ SWNA+I
Sbjct: 107 RRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALI 166
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ + G + L LF M G+ D T L A+ L+ +H + G
Sbjct: 167 AGYTESGDMASALELFLEMEREGLAPDEATFASLL-TAVEGPSCFLMHQLHGKIVKYGSA 225
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY- 246
++V N I+AY++C LK + +F GI + +R ++SWN+++G T+ D+++ F+
Sbjct: 226 LGLTVLNAAITAYSQCGSLKDSRRIFDGIGD-IRDLISWNAMLGAYTHNGMDDEAMKFFV 284
Query: 247 RHMIYDGFRPDVTTVVSLLSSCV-CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
R M G PD+ + S++SSC QGR++H I + V N LI+MY++
Sbjct: 285 RMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR 344
Query: 306 CGD---IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
+ ++ A F+ + + VSW +M++GY+Q G +AL+ F M + D
Sbjct: 345 YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAF 404
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ + + L+LGK G N V ++LI MYSK G I DAR+ F +
Sbjct: 405 SAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
+ V W MI G A +G+ LF++M++ + +TF+ ++ +C+HAG +++G
Sbjct: 465 SSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
N M Y V + HY+C DL GR G+L +A + SMP + DA +W TLL AC+IH
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+E+ VA LF EP + YV ++++Y+ G W A ++ +MK+ + K PG S +
Sbjct: 585 NVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWI 644
Query: 603 HINGKTCTFTVED 615
+ + +F ED
Sbjct: 645 EVKNEVHSFNAED 657
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 191/383 (49%), Gaps = 9/383 (2%)
Query: 103 DRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT 162
D L A ++FD++P RD SWNA++ A G + L M G+ ++ +
Sbjct: 41 DGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSAL 100
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
++A A+ ++ + S + G+ +V + + YAKC ++ A VF G+ E R
Sbjct: 101 RSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPE--RN 158
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
VSWN++I G T +L + M +G PD T SLL++ P + +L H
Sbjct: 159 TVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQL-HG 217
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLD 341
+ YG L ++V+N I+ YS+CG + +R +FDG+ D R +SW AM+ Y G D
Sbjct: 218 KIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDD 277
Query: 342 EALRLFFA-MEAAGEVPDLVTVLSMISGCGQSGALE-LGKWFDNYACSGGLKDNVMVCNA 399
EA++ F M+ +G PD+ + S+IS C + G + G+ L+ VCNA
Sbjct: 278 EAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNA 337
Query: 400 LIDMYSKCGS---IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
LI MY++ + DA + F +L K VSW +M+ G + +G +AL F M ++
Sbjct: 338 LIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENV 397
Query: 457 RPNRVTFLAVLQACTHAGFLEKG 479
R + F A L++ + L+ G
Sbjct: 398 RTDEYAFSAALRSSSELAVLQLG 420
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 17/358 (4%)
Query: 194 NTWISAYAKC--NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
N ++AY++ + L A VF + R VSWN+++ ++ R M
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPR--RDEVSWNALLAAQAASGAHPEAWRLLRAMHA 86
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G + + S L S G + S + G +V + L+ +Y+KCG +
Sbjct: 87 QGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRD 146
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGC-G 370
AR +FDGM +R VSW A+I+GY + GD+ AL LF ME G PD T S+++ G
Sbjct: 147 ARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEG 206
Query: 371 QSGAL--ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KTVVS 427
S L +L Y + GL V NA I YS+CGS+ D+R +F + + + ++S
Sbjct: 207 PSCFLMHQLHGKIVKYGSALGLT----VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262
Query: 428 WTTMIAGCALNGEFVEALDLFHQMM-ELDLRPNRVTFLAVLQACTHAGFLE-KGWGYFNL 485
W M+ NG EA+ F +MM E + P+ +F +++ +C+ G + +G L
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322
Query: 486 MTK--VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ K + V P N M +++A S+ +K D W ++L H
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSMLTGYSQH 379
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 252/444 (56%), Gaps = 37/444 (8%)
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
+YA L + VF +E V S+++II FD + +Y M+ G P+
Sbjct: 88 SYAALGRLDCSVFVFNTFDEP--NVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNA 145
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSV----------------------- 295
T S+L SC +L G+++H I G D+ V
Sbjct: 146 FTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDK 201
Query: 296 --------INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
+ T+++ YSK G++D AR LF+GM +R V W MI GYAQ G +E+L+LF
Sbjct: 202 MPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLF 261
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M A +P+ VTVL+++S CGQ GALE G+W +Y + G++ NV V ALIDMYSKC
Sbjct: 262 RRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKC 321
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
GS+ DAR +F + +K VV+W +MI G A++G AL LF +M E +P +TF+ +L
Sbjct: 322 GSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGIL 381
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
AC H G +E+G +F LM Y + P++ HY CM +LLGR G L+EA V++M I +D
Sbjct: 382 SACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAAD 441
Query: 528 AGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTM 587
+WGTLL C++H NI++GE +A L + + ++ YV ++N+YA G W+GVA +RT+
Sbjct: 442 PVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTL 501
Query: 588 MKRNQVKKFPGQSLVHINGKTCTF 611
MK + ++K G S + ++ K F
Sbjct: 502 MKEHGIEKEHGCSSIEVDNKVHEF 525
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 188/404 (46%), Gaps = 55/404 (13%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +++ + + + + YA RLDC+ +F+ + +V S++A+I Q
Sbjct: 66 IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
++ + M G++ + T + ++ L K +H I +G+ +D+ V
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTG 181
Query: 196 WISAYAKCNDL--------------------------KMAEL-----VFRGIEEGLRTVV 224
+ YA+ D+ KM EL +F G++E R VV
Sbjct: 182 LVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKE--RDVV 239
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHG 284
WN +IGG ++SL +R M+ P+ TV+++LS+C AL GR +HS+
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYI 299
Query: 285 IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+ G ++V V LI MYSKCG ++ AR +FD + D+ V+W +MI GYA G AL
Sbjct: 300 ENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHAL 359
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNA 399
+LF M G P +T + ++S CG G +E G+ F D Y G++ +
Sbjct: 360 QLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKY----GIEPKIEHYGC 415
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVS-----WTTMIAGCALN 438
++++ + G + +A Y L + ++ W T++ C L+
Sbjct: 416 MVNLLGRAGHLEEA----YGLVKNMTIAADPVLWGTLLGCCRLH 455
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A + +M +EPN TF + K+C+ S +++H +K SD++V+T +V
Sbjct: 128 RAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES----GKVLHCQAIKLGLGSDLYVRTGLV 183
Query: 97 DMYAKCDRLDCAYKLFDKMP-------------------------------DRDVASWNA 125
D+YA+ + CA +LFDKMP +RDV WN
Sbjct: 184 DVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNV 243
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
MI G+AQ G + L LF M + + VTV+ + A L + +HS+ + G
Sbjct: 244 MIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKG 303
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
+ +V V I Y+KC L+ A LVF I + + VV+WNS+I G +L
Sbjct: 304 IQINVHVGTALIDMYSKCGSLEDARLVFDRIRD--KDVVAWNSMIVGYAMHGFSQHALQL 361
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYS 304
+ M G +P T + +LS+C + +GR YG + + ++++
Sbjct: 362 FEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLG 421
Query: 305 KCGDIDSARFLFDGM 319
+ G ++ A L M
Sbjct: 422 RAGHLEEAYGLVKNM 436
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I +++L LFRRM PN +T + AC +L + IH +I
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ V T ++DMY+KC L+ A +FD++ D+DV +WN+MIVG+A GF + L
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHA 168
LF M G + +T +G+ A H
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHG 387
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 280/528 (53%), Gaps = 12/528 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPD--RDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
MYAKC++++ A + ++ D R+V ++NA+I GF G + L + MR G+ D
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
T L + + +K +H +G+D D+ V ++ +S+Y K +K A +F
Sbjct: 61 YTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDE 120
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
I + R VV WNS++ G +FD++L R M +G TV +LS
Sbjct: 121 IPD--RDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFD 178
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
GRLVH I GFD VSV N LI MY KC + A +F+ M ++ SW +++S
Sbjct: 179 NGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANE 238
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKD-- 392
D D LRLF M G DLVT+ +++ C AL G+ Y G +KD
Sbjct: 239 LCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGE 298
Query: 393 -----NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
N+ NAL+DMY+KCGS+ DA +FY + + SW MI G ++G EAL +
Sbjct: 299 SENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYM 358
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F M + L+PN +TF+ VL AC+HAGF+ +G + M + V P + HY+C+ D+LG
Sbjct: 359 FSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLG 418
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
R G+L+EA +MPI+++ +W LL AC+++ N+++ E A ++FEL P YV
Sbjct: 419 RAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVL 478
Query: 568 MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
M+N Y GR+ V ++R M++ VKK PG S + + TF D
Sbjct: 479 MSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGD 526
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 209/428 (48%), Gaps = 12/428 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+N+ I V L + M++ + P+ TFP + K ++ + + IHG +
Sbjct: 28 YNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKYTFPCLIKGLCEVMEVFQVKKIHGLVR 87
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K D++V +++V Y K + + A +LFD++PDRDV WN+M+ G+AQ+G ++ L
Sbjct: 88 KLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNSMVNGYAQIGRFDEALG 147
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+ M G+ TV G+ + VH F I +G D+ VSVCN I Y
Sbjct: 148 VCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMGFDSCVSVCNALIDMYG 207
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F + E + + SWNSI+ D +L + M+ DG + D+ T+
Sbjct: 208 KCRCVVDALEIFETMNE--KDIFSWNSILSANELCSDHDGTLRLFDRMLGDGVQLDLVTI 265
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLD--------VSVINTLISMYSKCGDIDSAR 313
++L +C ALV GR +H + I GF D + IN L+ MY+KCG + A
Sbjct: 266 TTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTINALMDMYAKCGSMRDAG 325
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
+F M +R SW MI GY G +EAL +F M +G P+ +T + ++ C +G
Sbjct: 326 MVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSGLKPNEITFVGVLLACSHAG 385
Query: 374 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTM 431
+ G K+ G+ + +IDM + G + +A +L +P +T V W +
Sbjct: 386 FISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVVWRAL 445
Query: 432 IAGCALNG 439
+A C L G
Sbjct: 446 LAACQLYG 453
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 146/332 (43%), Gaps = 12/332 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + +AL + R M + + + T + A DF +++HG ++
Sbjct: 129 WNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMI 188
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S + V ++DMY KC + A ++F+ M ++D+ SWN+++ + L
Sbjct: 189 KMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLR 248
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD--------VSVC 193
LF M G+Q D VT+ + A H L + +H + I G D +
Sbjct: 249 LFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTI 308
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N + YAKC ++ A +VF + R SWN +I G +++L + M G
Sbjct: 309 NALMDMYAKCGSMRDAGMVFYNMSN--RDTASWNIMIMGYGMHGYGNEALYMFSDMCKSG 366
Query: 254 FRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
+P+ T V +L +C + QG + + + +G + +I M + G ++ A
Sbjct: 367 LKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEA 426
Query: 313 RFLFDGMCDRTR-VSWTAMISGYAQKGDLDEA 343
L M +T V W A+++ G++D A
Sbjct: 427 YKLAVTMPIQTNPVVWRALLAACQLYGNVDLA 458
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 253/423 (59%), Gaps = 5/423 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ Y+K D+ A +F G+ RT SWNS+I +G ++ ++L +R M+ +G
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVR--RTSASWNSMIACYAHGGEYQEALRLFRRMLSEG 212
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSA 312
RP+ T+ ++ S C L G+ S + DL +++T L+ MY KC ID A
Sbjct: 213 ARPNAITIATMFSICAKTGDLETGKWARS--LIAEQDLQNMIVHTALMEMYVKCQAIDEA 270
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R FD M R V+W+ MI+GYAQ G E+L LF M+A P+ VT++ ++S C Q
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQL 330
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G+ ELG ++ S L + +ALIDMY+KCG +G AR +F + K V++W +M+
Sbjct: 331 GSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMM 390
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
G ALNG +A+ L+ +M E D++PN +TF+A+L ACTHAG +++G +F M ++ V
Sbjct: 391 RGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHV 450
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+P++ H +C+ DLL + G+L+EA F+ M ++ +A IW TLL AC+ H ++E+ + A
Sbjct: 451 SPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAS 510
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+L LEP +++ YV ++NIYA G W V +R +M+ V+K S + ++G+ F
Sbjct: 511 KLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFL 570
Query: 613 VED 615
V+D
Sbjct: 571 VQD 573
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 148/295 (50%), Gaps = 37/295 (12%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGF------------------DLDVSV---------- 295
++ SC A QG+ VH H I G D+D +V
Sbjct: 91 VVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKD 150
Query: 296 ---INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+N LI+ YSK GD+ AR LFDGM RT SW +MI+ YA G+ EALRLF M +
Sbjct: 151 PIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLS 210
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G P+ +T+ +M S C ++G LE GKW + L+ N++V AL++MY KC +I +
Sbjct: 211 EGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCQAIDE 269
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
AR F + ++ VV+W+TMIAG A NG E+L+LF +M +PN VT + VL AC
Sbjct: 270 ARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQ 329
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIK 525
G E G + + V N L Y S + D+ + G + A M K
Sbjct: 330 LGSDELGG---QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHK 381
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 196/439 (44%), Gaps = 45/439 (10%)
Query: 35 AHKALL-----LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI 89
+H+ LL L RR +D+ P P + K+CA L+ + +H H + DI
Sbjct: 65 SHQELLDAFSSLHRR--GSDVPPG--CVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDI 120
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRD------------------------------ 119
FVQT +VD YAK +DCA K+FD+MP +D
Sbjct: 121 FVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRR 180
Query: 120 -VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
ASWN+MI +A G ++ L LF M G + + +T+ + L K
Sbjct: 181 TSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR 240
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
S + ++ V + Y KC + A F +++ R VV+W+++I G +
Sbjct: 241 SLIAEQDLQ-NMIVHTALMEMYVKCQAIDEARREFDRMQQ--RDVVAWSTMIAGYAQNGR 297
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+SL + M +P+ T+V +LS+C + G + SH L + +
Sbjct: 298 PHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSA 357
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
LI MY+KCG + AR +F+ M + ++W +M+ G A G +A+ L+ M P+
Sbjct: 358 LIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPN 417
Query: 359 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+T +++++ C +G ++ G +F + V C ++D+ K G + +A +
Sbjct: 418 EITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFI 477
Query: 418 YALP-EKTVVSWTTMIAGC 435
+ E V W+T+++ C
Sbjct: 478 CDMEVEPNAVIWSTLLSAC 496
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 172/412 (41%), Gaps = 45/412 (10%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T WNS I E +AL LFRRM PN +T + CAK D +
Sbjct: 181 TSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR 240
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I + ++ V T +++MY KC +D A + FD+M RDV +W+ MI G+AQ G
Sbjct: 241 SLIAEQDL-QNMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPH 299
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF M+ + + VT++G+ A L + S + + + I
Sbjct: 300 ESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALI 359
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + A VF +E + V++WNS++ G D++ Y+ M + +P+
Sbjct: 360 DMYTKCGHVGRARSVFNRMEH--KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPN 417
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARFLF 316
T V+LL++C H G D +S + +++ ++ +
Sbjct: 418 EITFVALLTACT----------------HAGLVDQGMSFFKEMKTIHHVSPQVEHCACIV 461
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D +C + G L EA + ME P+ V +++S C +E
Sbjct: 462 DLLC---------------KSGRLREAYKFICDMEVE---PNAVIWSTLLSACRAHADVE 503
Query: 377 LGKWFDNYACSGGL---KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
L K A S L DN + L ++Y+ G GD RE+ + K V
Sbjct: 504 LAK----LAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNV 551
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 81/201 (40%), Gaps = 33/201 (16%)
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGC 369
+AR LFD + T +IS ++ E L F ++ G +VP L ++ C
Sbjct: 37 AARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPL-VVKSC 95
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDM-------------------------- 403
A GK +A GL ++ V AL+D
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 404 -----YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
YSK G + AR LF + +T SW +MIA A GE+ EAL LF +M+ RP
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 459 NRVTFLAVLQACTHAGFLEKG 479
N +T + C G LE G
Sbjct: 216 NAITIATMFSICAKTGDLETG 236
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 290/566 (51%), Gaps = 20/566 (3%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W + I + + +AL L+ M DIEP+++ + +AC++L + + +H
Sbjct: 366 TVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVH 422
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I F + VQT +VDMY KC L A + FD RDV SW ++I ++ F
Sbjct: 423 SRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGR 482
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L +F++M L G++ + +T + A L +++HS + G +D V N +
Sbjct: 483 EALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALV 542
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S Y+K + A +VF I ++ SW ++ T ++L Y + +GFRP
Sbjct: 543 SMYSKFGRVDFARVVFDSIP--VKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPG 600
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ L SC E + + R +H F D+ + N L+++Y+KCG+++ AR +FD
Sbjct: 601 SPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFD 660
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M ++ VSWT MI GYAQ G EAL L+ AM+ P+ + + +IS C GAL
Sbjct: 661 QMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDVQ---PNFIAFVPVISSCADLGALVE 717
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ GL++N ++ AL++MY+KCG +G ARE F + +W +M A
Sbjct: 718 GQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQ 777
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
G + L+L+ +M ++PN +T L+VL AC+H G LE+ F M + + P
Sbjct: 778 FGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSE 837
Query: 498 HYSCMADLLGRKGKLKEALDFVQ----------SMPIKSDAGIWGTLLCACKIHRNIEIG 547
HYSCM DLLGR G+L+EA V+ + P+ A W + L ACK H +
Sbjct: 838 HYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSA--WMSFLGACKTHNDWGRA 895
Query: 548 EYVAYRLFELEPHSAAPYVEMANIYA 573
A +L+EL+P +APYV ++ Y+
Sbjct: 896 AGAAEKLYELDPEDSAPYVLLSQTYS 921
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 253/532 (47%), Gaps = 14/532 (2%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
R+ + T+ WN+ I V + +AL FRRM D P+++TF + AC
Sbjct: 55 RIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPD 111
Query: 69 DFLYSQMIHGHI-VKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
D + IH I SP +D +Q ++V MY KC L+ A ++F + ++ SW AM
Sbjct: 112 DLETGKAIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAM 171
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
I +AQ G+ + + +F +M G ++ D +T G+ A L +H+ G
Sbjct: 172 ITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKG 231
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
V++ + V I Y K + A VF + + R VV W + I C Y + +L
Sbjct: 232 VESAM-VSTGLIDLYGKWGFFEDALQVFESVRD--RDVVIWTAFIAACVYHGQSGFALEL 288
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+R M +G + + T +L++C E G+ + G + D + + ++S++++
Sbjct: 289 FRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHAR 348
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG + R +FD M RT V+WT MI+ Y Q+G EAL L+ M+ PD + + ++
Sbjct: 349 CGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMDIE---PDDIALSNV 405
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ C + LE G+ + S + ++MV L+DMY KCG + +AR F + V
Sbjct: 406 LQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDV 465
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
+SWT++I + EAL++FH M + PN +TF V+ AC+ L G +
Sbjct: 466 ISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSR 525
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ ++ E + + + + G++ A S+P+K W +L A
Sbjct: 526 VVATGHISDEFVG-NALVSMYSKFGRVDFARVVFDSIPVKRYPS-WRVMLVA 575
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 242/522 (46%), Gaps = 9/522 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLF-RRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
R W + I +A+ +F M + +EP+ +T+ + AC+ L D
Sbjct: 161 RRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETG 220
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
IH +++S V T ++D+Y K + A ++F+ + DRDV W A I
Sbjct: 221 MRIHA-LIRSKGVESAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYH 279
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G L LF M G+QA+ VT + A + + K++ +G++ D +
Sbjct: 280 GQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQ 339
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ +S +A+C L +F + RTVV+W ++I ++L Y M
Sbjct: 340 DGILSLHARCGSLVGTREMFDRMPH--RTVVTWTTMIAAYNQRGYSMEALELYHCM---D 394
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD + ++L +C + L QGR VHS F+ + V L+ MY KCGD+ AR
Sbjct: 395 IEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEAR 454
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
FDG R +SWT++I+ Y+ + EAL +F +ME G P+ +T ++I C +
Sbjct: 455 RTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLS 514
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+L G+ + + G + V NAL+ MYSK G + AR +F ++P K SW M+
Sbjct: 515 SLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLV 574
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
NG EAL+++ ++ RP F A L +CT + + ++ K
Sbjct: 575 ALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVI-KSSDFY 633
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
P+L + + ++ + G+L+EA M K++ W T++
Sbjct: 634 PDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVS-WTTMI 674
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 237/509 (46%), Gaps = 21/509 (4%)
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TF + ACA L D + +H I +S D +Q ++++YAKC L+ + ++F+ M
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
R VA+WN MI + Q F ++ L F M F +V+G A L K
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAFRRMDAPPSSITFTSVLG---ACCSPDDLETGK 117
Query: 176 SVHSFGIHIG-----VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
++H IG + AD + N+ ++ Y KC L+ AE VF GI + SW ++I
Sbjct: 118 AIHR---QIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRR--KNAFSWTAMI 172
Query: 231 GGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
++ + M+ +G PD T +L++C L G +H+ G
Sbjct: 173 TAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGV 232
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
+ V LI +Y K G + A +F+ + DR V WTA I+ G AL LF
Sbjct: 233 E-SAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRK 291
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
MEA G + VT +++ C E GK ++ + GL+ + ++ + ++ ++++CGS
Sbjct: 292 MEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGS 351
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ RE+F +P +TVV+WTTMIA G +EAL+L+H M D+ P+ + VLQA
Sbjct: 352 LVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQA 408
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
C+ LE+G + + P L + + D+ + G L EA + D
Sbjct: 409 CSRLKNLEQGRAVHSRIAS-RDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKAR-DVI 466
Query: 530 IWGTLLCACKIHRNIEIGEYVAYRLFELE 558
W +L+ A H N + ELE
Sbjct: 467 SWTSLITAYS-HENFGREALEVFHSMELE 494
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 211/452 (46%), Gaps = 15/452 (3%)
Query: 14 YRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
+++ + W S I +N +AL +F M+ +EPN++TF + AC++LS L
Sbjct: 460 FKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPG 519
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ +H +V + SD FV +V MY+K R+D A +FD +P + SW M+V Q
Sbjct: 520 RALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQN 579
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G + L ++ + L G + + + +S +++H D+ +
Sbjct: 580 GHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLS 639
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N ++ YAKC +L+ A LVF + E + VSW ++IGG + ++L Y+ M
Sbjct: 640 NVLMNVYAKCGELEEARLVFDQMTE--KNEVSWTTMIGGYAQNGRPAEALELYKAM---D 694
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+P+ V ++SSC ALV+G+ VH+ G + ++ L++MY+KCG + AR
Sbjct: 695 VQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAR 754
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
FD +W +M + YAQ G + L L+ M G P+ +T+LS++ C G
Sbjct: 755 EFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMG 814
Query: 374 AL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY---------ALPEK 423
L E F+ G+ + + D+ + G + +A ++ A
Sbjct: 815 MLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPV 874
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V +W + + C + ++ A ++ ELD
Sbjct: 875 AVSAWMSFLGACKTHNDWGRAAGAAEKLYELD 906
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/589 (30%), Positives = 296/589 (50%), Gaps = 38/589 (6%)
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
+C K S + +HGHI+ S D F+ + +V Y+ + L A+ L + S
Sbjct: 88 SCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFRPCS 147
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
WN +I + + E + + M G++ D T + +A ++L VH
Sbjct: 148 WNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSIN 207
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII------------ 230
+ V N IS Y +C ++ A +F + E R VSWNS+I
Sbjct: 208 SWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLE--RDAVSWNSMISCYSSRGMWREA 265
Query: 231 -----------------------GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
GGC F +L M G D ++ L +
Sbjct: 266 FELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGA 325
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C A+ G+ +H I + + +V N L++MY++C DI A LF D++R++W
Sbjct: 326 CSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITW 385
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
+M+SG G ++EAL LF + G PD VT S++ C + L+ G+ F Y
Sbjct: 386 NSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITK 445
Query: 388 G-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALD 446
+D++++ NAL+DMY++ G + +A+ +FY+L +K V++T++IAG + GE +A+
Sbjct: 446 HRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVR 505
Query: 447 LFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLL 506
LF +M ++P+ +T +AVL AC+H+G + + F M V+ ++P L HY+CMADL
Sbjct: 506 LFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLF 565
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYV 566
GR G L +A + + MP + + IW TL+ AC IH N++IGE+ A +L E+ P + YV
Sbjct: 566 GRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYV 625
Query: 567 EMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+AN+YA G W +A +RT+M+ + V K PG S V + + +F+V D
Sbjct: 626 LIANMYAAAGSWSKLAEIRTLMRDSGVAKIPGCSWVDVGSEFISFSVGD 674
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 232/488 (47%), Gaps = 48/488 (9%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN I V A+L +++M + P+N TFP I KAC + + + +H I
Sbjct: 147 SWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSI 206
Query: 81 VK-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
S WS +FV ++ MY +C +D A LFD M +RD SWN+MI ++ G +
Sbjct: 207 NSWSTPWS-LFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREA 265
Query: 140 LCLFYNMRLVGIQADFVT----VMGLTQAAIHAKHLSLLKSVHSFGIH-------IGVDA 188
LF +M+ ++ + VT G + + L LL + +FGIH IG+ A
Sbjct: 266 FELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGA 325
Query: 189 ------------------------DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
+V N ++ YA+C D++ A ++FR ++ R +
Sbjct: 326 CSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSR--I 383
Query: 225 SWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH- 283
+WNS++ G T+ + +++L +R ++ G PD T S+L C L GR H +
Sbjct: 384 TWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYI 443
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
H F + + N L+ MY++ G + A+ +F + + V++T++I+GY +G+ +A
Sbjct: 444 TKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKA 503
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALID 402
+RLF M+ PD +T+++++S C SG + + F GL + + D
Sbjct: 504 VRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMAD 563
Query: 403 MYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDLFHQMME--LDLRPN 459
++ + G + A+E+ +P + T W T+I C ++G +D+ E L++RP
Sbjct: 564 LFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGN----MDIGEWAAEKLLEMRPE 619
Query: 460 RVTFLAVL 467
+ ++
Sbjct: 620 HSGYYVLI 627
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%)
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
D F + ++ LL SC +L G+ +H H I G D +++ L+ YS +
Sbjct: 73 DSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPE 132
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
A L + SW +I+ Y + + A+ + M + G PD T S++ CG+
Sbjct: 133 AHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGE 192
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
+ L+ G S ++ V NALI MY +CG + AR LF + E+ VSW +M
Sbjct: 193 TQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSM 252
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAG 474
I+ + G + EA +LF M L N VT+ + C G
Sbjct: 253 ISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVG 295
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 309/588 (52%), Gaps = 12/588 (2%)
Query: 37 KALLLFRR----MKKNDIEPNN-LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSD--I 89
KA + FR ++ N + P++ L + K A + + IH H++ + ++ I
Sbjct: 7 KAYVPFRHAPFLLRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSI 66
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
++++ YAK +++ A+ LFD+MP+R+V SW+A++ G+ GF KV+ L +M
Sbjct: 67 IEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISE 126
Query: 150 GIQA--DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
G + +++ + ++ + + + H + G V N +S Y+KC+ ++
Sbjct: 127 GNVSPNEYILAIAISSCCDRGR-VEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQ 185
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A V+ E + +V++NSI+ + L R M+ + + D T V+ S
Sbjct: 186 DAMGVWN--EVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSL 243
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C + L G VH + + D V + +I+MY KCG AR +FDG+ R V W
Sbjct: 244 CASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLW 303
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
TA+++ Q G +EAL LF ME + T +++ C A G ++
Sbjct: 304 TAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEK 363
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G K +VMV NALI+MY+K G I A+++F + + +++W MI G + +G +AL +
Sbjct: 364 SGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLV 423
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F M+ + PN VTF VL AC H G +++G+ Y + + K + V P L HY+C+ LL
Sbjct: 424 FQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLS 483
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVE 567
+ G+L EA +F+++ P+K D W TLL AC +H+N +G +VA + E++P+ Y
Sbjct: 484 KTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTL 543
Query: 568 MANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++NIYA RWDGV +R +M+ ++KK PG S + I T FT ED
Sbjct: 544 LSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSED 591
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 10/320 (3%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I +NS + V+ + L + R M ++ + +TF CA L D +HG
Sbjct: 199 IVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHG 258
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++ S D +V + +++MY KC + A +FD + R+V W A++ Q G E+
Sbjct: 259 KMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEE 318
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQ--AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
L LF M ++++ T L A + A+ L +H G V V N
Sbjct: 319 ALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSL--LHGHSEKSGFKHHVMVGNAL 376
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I+ YAK D++ A+ VF + R +++WN++I G ++ +L ++ M+ P
Sbjct: 377 INMYAKSGDIEAAKKVFSDMMH--RDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHP 434
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGI--HYGFDLDVSVINTLISMYSKCGDIDSAR- 313
+ T +LS+C LVQ + H + +G + ++S+ SK G ++ AR
Sbjct: 435 NYVTFTGVLSAC-GHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARN 493
Query: 314 FLFDGMCDRTRVSWTAMISG 333
F+ V+W +++
Sbjct: 494 FMRTAPVKWDVVAWRTLLNA 513
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 8/223 (3%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S + W + + +AL LF +M++ +++ N T+ + ACA LS
Sbjct: 296 QSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGS 355
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++HGH KS F + V +++MYAK ++ A K+F M RD+ +WNAMI GF+ G
Sbjct: 356 LLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHG 415
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS----VHSFGIHIGVDADV 190
+K L +F +M ++VT G+ A HL L++ +H GV +
Sbjct: 416 LGKKALLVFQDMLAAEEHPNYVTFTGVLSA---CGHLGLVQEGFYYLHHLMKQFGVQPGL 472
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
+S +K L A R VV+W +++ C
Sbjct: 473 EHYTCIVSLLSKTGQLNEARNFMRTAPVKW-DVVAWRTLLNAC 514
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 283/530 (53%), Gaps = 3/530 (0%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+IH I+ + F S+I + T ++ Y+K A K+FD+MP+R V SW+A I G++Q
Sbjct: 17 HLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQN 76
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G + L +F +M G +A+ T + +A + L + +++ V
Sbjct: 77 GCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQ 136
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
+ + ++KC ++ A +F +EE R VVSWN+IIG DS +R M+ +G
Sbjct: 137 SALLDLHSKCGKMEDASYLFGMMEE--RDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEG 194
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD+ T S+L + +++ +H I G+ +S+ +LI Y+KC + SA
Sbjct: 195 MSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAH 254
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
L+ M + +S TA+++GYA+ + +AL LF ++ D V + SM + C
Sbjct: 255 CLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANI 314
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
+L +G+ A +V + NALIDMY+K G I DA F + EK V+SWT++I
Sbjct: 315 SSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLI 374
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
G +G EA+ LF +M L+PN +TFL++L AC H G +GW FN M Y +
Sbjct: 375 TGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNI 434
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
P H+SCM DL R G L+EA + + M IK +A +WG +L AC I+ N+ + E A
Sbjct: 435 LPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPLAEEAAI 494
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
LF+++P ++ YV +A+IYA G WD +R +M+ +KK PG S +
Sbjct: 495 HLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSFI 544
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 227/474 (47%), Gaps = 6/474 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T+ W++QI ALL+F M + + N T+ + +AC L I
Sbjct: 62 TVVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQ 121
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
G + KS F S++ VQ+ ++D+++KC +++ A LF M +RDV SWNA+I +A GF
Sbjct: 122 GCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSG 181
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+F +M G+ D T + +A+ A + + +H I +G + +S+ + I
Sbjct: 182 DSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLI 241
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDD-SLNFYRHMIYDGFRP 256
AYAKC L A +++ + ++ ++S +++ G + +L+ ++ + +
Sbjct: 242 DAYAKCESLASAHCLYKSMP--MKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKI 299
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D + S+ + C +L GR +H+ + DV++ N LI MY+K G+I A F
Sbjct: 300 DDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAF 359
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ M ++ +SWT++I+GY G EA+ LF ME G P+ +T LS++ C G
Sbjct: 360 NEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTG 419
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAG 434
G + F+N + + ++D++++ G + +A L + K S W ++
Sbjct: 420 EGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGA 479
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
C + G A + + ++D N V ++ + AG + W LM +
Sbjct: 480 CYIYGNMPLAEEAAIHLFKMD-PENSVNYVVLADIYAAAGSWDNAWKMRKLMEE 532
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 136/267 (50%), Gaps = 13/267 (4%)
Query: 265 LSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
L C+ +A G L+H+ + GF ++ + LI YSK GD SAR +FD M +RT
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
VSW+A ISGY+Q G +AL +F M AG + T S++ C L+ G
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
N++V +AL+D++SKCG + DA LF + E+ VVSW +I A+ G ++
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL---NHYSC 501
+F MM+ + P+ TF +VL+A A + + + +++Q+ +L +H S
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIR-------VCQIHQLIIQLGYGSHISL 236
Query: 502 MADLLGRKGK---LKEALDFVQSMPIK 525
L+ K L A +SMP+K
Sbjct: 237 SGSLIDAYAKCESLASAHCLYKSMPMK 263
>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
Length = 849
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/606 (32%), Positives = 317/606 (52%), Gaps = 11/606 (1%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYS 73
R + W + + A +N HK +L L R+M + PN +T + A ++L ++ +
Sbjct: 143 RHPNVYSW-TILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEA 201
Query: 74 QMIHGHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ IH + D+ + T ++DMYAKC + A +FD+ ++D+A NAMI + Q
Sbjct: 202 RKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQ 261
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+G+ + F ++ G+Q + VT L +A S + H I + DV V
Sbjct: 262 LGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVV 321
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+S Y++C L+ A VF + + VV+WN +I G D++L Y M
Sbjct: 322 NTALVSMYSRCGSLEDARRVFDRMPG--KNVVTWNVMIAGYAQEGYTDEALQLYVSMEAA 379
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DS 311
G PD T V++L SC E L GR +H H + G+D ++V++ LI+MYS CG + D+
Sbjct: 380 GVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDA 439
Query: 312 ARFLFDGMCDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
G+ + V SWTAM++ + G+ AL LF M+ G ++VT +S I C
Sbjct: 440 VDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACS 499
Query: 371 QSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
GAL G F+ +G L D V++ +LI++Y KCG + A E+F+ L K +V+W
Sbjct: 500 SIGALVEGHAIFERVIVTGHLID-VVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWN 558
Query: 430 TMIAGCALNGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T++A + NGE + +L Q M+LD +PN +T L +L C+H G + K YF M
Sbjct: 559 TILAASSQNGEETLSDELL-QEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVY 617
Query: 489 VYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ + P HY C+ DLLGR G+L+E F+ S P D+ +W +LL +C IH ++E G
Sbjct: 618 GHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGL 677
Query: 549 YVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A R+ L+P +A+PYV ++N++A G D V +L + +KK +S + +NG
Sbjct: 678 RAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGVV 737
Query: 609 CTFTVE 614
F V
Sbjct: 738 HEFGVR 743
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 252/541 (46%), Gaps = 19/541 (3%)
Query: 11 NKIYRSSTINQWNSQIREAVDKNEAHKALLLFR----RMKKNDIEPNNLTFPFIAKAC-- 64
+K + N W + + E + A A + K +E N F+ A
Sbjct: 28 DKAFTGGEFNLWAAVVEEPQAHDYAPLAPPTLSDEDVKQKLASLEEQNQKSGFVDPAAYV 87
Query: 65 ---AKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
+ D + I HI S F D + +V+ Y KC + A +F + +V
Sbjct: 88 SLLKQSGDVTALKTIQAHISHSKRFAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNV 147
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 180
SW ++ +AQ G + VL L M L+G+ + VT+ + A + + +H+
Sbjct: 148 YSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHAR 207
Query: 181 GIHI-GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
+ DV + I YAKC D+ AE+VF + + N++I
Sbjct: 208 AAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARN--KDLACCNAMISAYIQLGYT 265
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D+++ + + G +P+ T L +C R+ H I DV V L
Sbjct: 266 VDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTAL 325
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
+SMYS+CG ++ AR +FD M + V+W MI+GYAQ+G DEAL+L+ +MEAAG PD
Sbjct: 326 VSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDE 385
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY- 418
+T ++++ C + L G+ + G ++ V +ALI MYS CGS+GDA ++F+
Sbjct: 386 ITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHK 445
Query: 419 -ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLE 477
+V+SWT M+ NGE AL LF +M +R N VTF++ + AC+ G L
Sbjct: 446 GVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALV 505
Query: 478 KGWGYFN-LMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 536
+G F ++ + ++ L + + +L G+ G+L AL+ + K+ W T+L
Sbjct: 506 EGHAIFERVIVTGHLIDVVLG--TSLINLYGKCGRLDYALEVFHYLSFKNIV-TWNTILA 562
Query: 537 A 537
A
Sbjct: 563 A 563
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 253/423 (59%), Gaps = 5/423 (1%)
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ Y+K D+ A +F G+ RT SWNS+I +G ++ ++L +R M+ +G
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVR--RTSASWNSMIACYAHGGEYQEALRLFRRMLSEG 212
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSA 312
RP+ T+ ++ S C L G+ S + DL +++T L+ MY KC ID A
Sbjct: 213 ARPNAITIATMFSICAKTGDLETGKWARS--LIAEQDLQNMIVHTALMEMYVKCRAIDEA 270
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
R FD M R V+W+ MI+GYAQ G E+L LF M+A P+ VT++ ++S C Q
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQL 330
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMI 432
G+ ELG ++ S L + +ALIDMY+KCG +G AR +F + K V++W +M+
Sbjct: 331 GSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMM 390
Query: 433 AGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQV 492
G ALNG +A+ L+ +M E D++PN +TF+A+L ACTHAG +++G +F M ++ V
Sbjct: 391 RGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHV 450
Query: 493 NPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+P++ H +C+ DLL + G+L+EA F+ M ++ +A IW TLL AC+ H ++E+ + A
Sbjct: 451 SPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAS 510
Query: 553 RLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFT 612
+L LEP +++ YV ++NIYA G W V +R +M+ V+K S + ++G+ F
Sbjct: 511 KLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFL 570
Query: 613 VED 615
V+D
Sbjct: 571 VQD 573
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 148/295 (50%), Gaps = 37/295 (12%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGF------------------DLDVSV---------- 295
++ SC A QG+ VH H I G D+D +V
Sbjct: 91 VVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKD 150
Query: 296 ---INTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+N LI+ YSK GD+ AR LFDGM RT SW +MI+ YA G+ EALRLF M +
Sbjct: 151 PIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLS 210
Query: 353 AGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 412
G P+ +T+ +M S C ++G LE GKW + L+ N++V AL++MY KC +I +
Sbjct: 211 EGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCRAIDE 269
Query: 413 ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTH 472
AR F + ++ VV+W+TMIAG A NG E+L+LF +M +PN VT + VL AC
Sbjct: 270 ARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQ 329
Query: 473 AGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIK 525
G E G + + V N L Y S + D+ + G + A M K
Sbjct: 330 LGSDELGG---QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHK 381
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 196/439 (44%), Gaps = 45/439 (10%)
Query: 35 AHKALL-----LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDI 89
+H+ LL L RR +D+ P P + K+CA L+ + +H H + DI
Sbjct: 65 SHQELLDAFSSLHRR--GSDVPPG--CVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDI 120
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRD------------------------------ 119
FVQT +VD YAK +DCA K+FD+MP +D
Sbjct: 121 FVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRR 180
Query: 120 -VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 178
ASWN+MI +A G ++ L LF M G + + +T+ + L K
Sbjct: 181 TSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR 240
Query: 179 SFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDK 238
S + ++ V + Y KC + A F +++ R VV+W+++I G +
Sbjct: 241 SLIAEQDLQ-NMIVHTALMEMYVKCRAIDEARREFDRMQQ--RDVVAWSTMIAGYAQNGR 297
Query: 239 FDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINT 298
+SL + M +P+ T+V +LS+C + G + SH L + +
Sbjct: 298 PHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSA 357
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
LI MY+KCG + AR +F+ M + ++W +M+ G A G +A+ L+ M P+
Sbjct: 358 LIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPN 417
Query: 359 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
+T +++++ C +G ++ G +F + V C ++D+ K G + +A +
Sbjct: 418 EITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFI 477
Query: 418 YALP-EKTVVSWTTMIAGC 435
+ E V W+T+++ C
Sbjct: 478 CDMEVEPNAVIWSTLLSAC 496
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 172/412 (41%), Gaps = 45/412 (10%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
T WNS I E +AL LFRRM PN +T + CAK D +
Sbjct: 181 TSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR 240
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I + ++ V T +++MY KC +D A + FD+M RDV +W+ MI G+AQ G
Sbjct: 241 SLIAEQDL-QNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPH 299
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ L LF M+ + + VT++G+ A L + S + + + I
Sbjct: 300 ESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALI 359
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y KC + A VF +E + V++WNS++ G D++ Y+ M + +P+
Sbjct: 360 DMYTKCGHVGRARSVFNRMEH--KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPN 417
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARFLF 316
T V+LL++C H G D +S + +++ ++ +
Sbjct: 418 EITFVALLTACT----------------HAGLVDQGMSFFKEMKTIHHVSPQVEHCACIV 461
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D +C + G L EA + ME P+ V +++S C +E
Sbjct: 462 DLLC---------------KSGRLREAYKFICDMEVE---PNAVIWSTLLSACRAHADVE 503
Query: 377 LGKWFDNYACSGGL---KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
L K A S L DN + L ++Y+ G GD RE+ + K V
Sbjct: 504 LAK----LAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNV 551
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 81/201 (40%), Gaps = 33/201 (16%)
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-EVPDLVTVLSMISGC 369
+AR LFD + T +IS ++ E L F ++ G +VP L ++ C
Sbjct: 37 AARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPL-VVKSC 95
Query: 370 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDM-------------------------- 403
A GK +A GL ++ V AL+D
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 404 -----YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
YSK G + AR LF + +T SW +MIA A GE+ EAL LF +M+ RP
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 459 NRVTFLAVLQACTHAGFLEKG 479
N +T + C G LE G
Sbjct: 216 NAITIATMFSICAKTGDLETG 236
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 302/585 (51%), Gaps = 9/585 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK---NDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
W + + V E+ L M + + +PN T AC L D + + +HG
Sbjct: 179 WTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHG 238
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+VK+ + +Q++++ MY KC AY+ F ++ ++D+ SW +MI +A+ G +
Sbjct: 239 LVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSD 298
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ F+ M + D + + + ++ + K+ H I D V N+ +S
Sbjct: 299 CVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLS 358
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y K L AE +F + ++ WN +I G K + +R M Y G R +
Sbjct: 359 MYCKFGMLSFAERLF---QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSES 415
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+VS ++SC + GR +H + I D +SV N+LI MY KC ++ + +F+
Sbjct: 416 VGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFN- 474
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+R + W A+IS + +EA+ LF M + P+ T++ ++S C LE G
Sbjct: 475 RSERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKG 534
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ Y G K N+ + AL+DMY+KCG + +RE+F ++ EK V+ W MI+G +N
Sbjct: 535 ERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMN 594
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G A+++F+ M E +++PN +TFL++L AC HAG +E+G F M + Y V P L H
Sbjct: 595 GYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKH 653
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y+CM DLLGR L+EA + V SMPI D G+WG LL ACK H IE+G + + E
Sbjct: 654 YTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSE 713
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMK-RNQVKKFPGQSLV 602
P + Y+ +AN+Y+ GRWD N+R MK R + K G S+V
Sbjct: 714 PENDGYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSMV 758
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 247/524 (47%), Gaps = 22/524 (4%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS ++ ++ + L + M+ ++ PN+ TFP +A + A +H
Sbjct: 77 WNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALAC 136
Query: 82 KSPFW-SDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K F+ + V ++ V +Y++CD ++ A K+FD++P RDV +W A+++G+ Q G E L
Sbjct: 137 KVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGL 196
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS---VHSFGIHIGVDADVSVCNTWI 197
M VG + L + +L L S +H + G+ + + ++ +
Sbjct: 197 ECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVL 256
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
S Y KC + A F + + ++SW S+I D + F+ M+ + PD
Sbjct: 257 SMYCKCGVPREAYQSFSEVIN--KDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPD 314
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ +LS + G+ H I + D V N+L+SMY K G + A LF
Sbjct: 315 GMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLF- 373
Query: 318 GMCDRTRVS---WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
R++ S W MI GY + G + ++LF M+ G + V ++S I+ CGQ G
Sbjct: 374 ---QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGE 430
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
+ LG+ G + + + V N+LI+MY KC + + +F E+ V+ W +I+
Sbjct: 431 INLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISA 489
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG---WGYFNLMTKVYQ 491
+ EA+ LF M+ D PN T + VL AC+H FLEKG Y N K ++
Sbjct: 490 HIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYIN--EKGFK 547
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+N L + + D+ + G+L+++ + SM ++ D W ++
Sbjct: 548 LNLPLG--TALVDMYAKCGQLEKSREVFDSM-MEKDVICWNAMI 588
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 4/212 (1%)
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H+ + G + + LIS+Y S+ LF + + W + + +
Sbjct: 31 HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 90
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNA 399
+ L + M + +P+ T + S + G AC G +N V ++
Sbjct: 91 PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSS 150
Query: 400 LIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL---DL 456
+ +YS+C + DA ++F +P + VV+WT ++ G NGE L+ +M +
Sbjct: 151 FVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQ 210
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+PN T AC + G L G L+ K
Sbjct: 211 KPNARTLEGGFLACGNLGDLVSGRCLHGLVVK 242
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 1/184 (0%)
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
F + G N + LI +Y + LF++LP K W + +
Sbjct: 30 FHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSL 89
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+ + L + M ++ PN TF V + H + G L KV S
Sbjct: 90 YPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGS 149
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
L R ++ +A+ +P++ D W L+ + E+G ++ +
Sbjct: 150 SFVSLYSRCDEMNDAVKVFDEIPVR-DVVAWTALVIGYVQNGESEMGLECISEMYRVGDD 208
Query: 561 SAAP 564
S P
Sbjct: 209 SQKP 212
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,367,733,062
Number of Sequences: 23463169
Number of extensions: 375616567
Number of successful extensions: 1217793
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8337
Number of HSP's successfully gapped in prelim test: 2932
Number of HSP's that attempted gapping in prelim test: 1022455
Number of HSP's gapped (non-prelim): 65065
length of query: 615
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 466
effective length of database: 8,863,183,186
effective search space: 4130243364676
effective search space used: 4130243364676
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)