BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036661
(615 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/607 (58%), Positives = 450/607 (74%), Gaps = 3/607 (0%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
RL +I S++N WN QIREAV++N+ ++LLLFR MK+ EPNN TFPF+AKACA+L+
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
D +M+H H++KSPFWSD+FV T VDM+ KC+ +D A K+F++MP+RD +WNAM+
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF Q G +K LF MRL I D VTVM L Q+A K L LL+++H+ GI +GVD
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG-CTYGDKFDDSLNFYR 247
V+V NTWIS Y KC DL A+LVF I+ G RTVVSWNS+ +G+ F D+ Y
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF-DAFGLYC 245
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ + F+PD++T ++L +SC PE L QGRL+HSH IH G D D+ INT ISMYSK
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
D SAR LFD M RT VSWT MISGYA+KGD+DEAL LF AM +GE PDLVT+LS+IS
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 368 GCGQSGALELGKWFDNYA-CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
GCG+ G+LE GKW D A G +DNVM+CNALIDMYSKCGSI +AR++F PEKTVV
Sbjct: 366 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
+WTTMIAG ALNG F+EAL LF +M++LD +PN +TFLAVLQAC H+G LEKGW YF++M
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEI 546
+VY ++P L+HYSCM DLLGRKGKL+EAL+ +++M K DAGIWG LL ACKIHRN++I
Sbjct: 486 KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKI 545
Query: 547 GEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHING 606
E A LF LEP AAPYVEMANIYA G WDG A +R++MK+ +KK+PG+S++ +NG
Sbjct: 546 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNG 605
Query: 607 KTCTFTV 613
K +FTV
Sbjct: 606 KNHSFTV 612
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/575 (36%), Positives = 327/575 (56%), Gaps = 2/575 (0%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
KAL F RM+ +D+EP F ++ K C ++ + IHG +VKS F D+F T +
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
+MYAKC +++ A K+FD+MP+RD+ SWN ++ G++Q G L + +M ++ F+
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + A + +S+ K +H + + G D+ V++ + YAKC L+ A +F G+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
E R VVSWNS+I + +++ ++ M+ +G +P +V+ L +C L +
Sbjct: 298 LE--RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +H + G D +VSV+N+LISMY KC ++D+A +F + RT VSW AMI G+AQ
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +AL F M + PD T +S+I+ + KW L NV V
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 475
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
AL+DMY+KCG+I AR +F + E+ V +W MI G +G AL+LF +M + +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
+PN VTFL+V+ AC+H+G +E G F +M + Y + ++HY M DLLGR G+L EA
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
DF+ MP+K ++G +L AC+IH+N+ E A RLFEL P +V +ANIY
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
W+ V +R M R ++K PG S+V I + +F
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 213/426 (50%), Gaps = 7/426 (1%)
Query: 46 KKNDIEPNNLTFP--FIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCD 103
++N I N P + + C+ L + + I + K+ + + F QT +V ++ +
Sbjct: 27 ERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYG 83
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
+D A ++F+ + + ++ M+ GFA++ L+K L F MR ++ L +
Sbjct: 84 SVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLK 143
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
L + K +H + G D+ + YAKC + A VF + E R +
Sbjct: 144 VCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE--RDL 201
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
VSWN+I+ G + +L + M + +P T+VS+L + + G+ +H +
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY 261
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ GFD V++ L+ MY+KCG +++AR LFDGM +R VSW +MI Y Q + EA
Sbjct: 262 AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 403
+ +F M G P V+V+ + C G LE G++ + GL NV V N+LI M
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 404 YSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTF 463
Y KC + A +F L +T+VSW MI G A NG ++AL+ F QM ++P+ T+
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 464 LAVLQA 469
++V+ A
Sbjct: 442 VSVITA 447
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 144/283 (50%), Gaps = 2/283 (0%)
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+S + + + A VF I+ L V +++++ G D +L F+ M YD P
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLN--VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
V LL C L G+ +H + GF LD+ + L +MY+KC ++ AR +F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M +R VSW +++GY+Q G AL + +M P +T++S++ +
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
+GK YA G V + AL+DMY+KCGS+ AR+LF + E+ VVSW +MI
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
N EA+ +F +M++ ++P V+ + L AC G LE+G
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPD 358
L+S++ + G +D A +F+ + + V + M+ G+A+ DLD+AL+ F M P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 359 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 418
+ ++ CG L +GK G ++ L +MY+KC + +AR++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+PE+ +VSW T++AG + NG AL++ M E +L+P+ +T ++VL A + +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
G + + +N + + D+ + G L+ A M ++ + W +++ A
Sbjct: 255 GKEIHGYAMR-SGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDA 311
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S T+ WN+ I AL F +M+ ++P+ T+ + A A+LS +++
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
IHG +++S ++FV T +VDMYAKC + A +FD M +R V +WNAMI G+ G
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
F + L LF M+ I+ + VT + + A H+
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 334/595 (56%), Gaps = 3/595 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN + E + ++ LF++M + +E ++ TF ++K+ + L + +HG I+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F V ++V Y K R+D A K+FD+M +RDV SWN++I G+ G EK L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M + GI+ D T++ + ++ +SL ++VHS G+ + CNT + Y+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC DL A+ VFR + + R+VVS+ S+I G +++ + M +G PDV TV
Sbjct: 343 KCGDLDSAKAVFREMSD--RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++L+ C L +G+ VH D+ V N L+ MY+KCG + A +F M
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SW +I GY++ +EAL LF +E PD TV ++ C A + G+
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y G + V N+L+DMY+KCG++ A LF + K +VSWT MIAG ++G
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
EA+ LF+QM + + + ++F+++L AC+H+G +++GW +FN+M ++ P + HY+
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ D+L R G L +A F+++MPI DA IWG LLC C+IH ++++ E VA ++FELEP
Sbjct: 641 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 700
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ YV MANIYA +W+ V LR + + ++K PG S + I G+ F D
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 232/463 (50%), Gaps = 5/463 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ N+Q+R + A+ L K DI+P T + + CA + +
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVD 117
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I + F D + + + MY C L A ++FD++ WN ++ A+ G
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ LF M G++ D T ++++ + + + +H F + G SV N+ +
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV 237
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
+ Y K + A VF + E R V+SWNSII G + L+ + M+ G D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ T+VS+ + C + GR VHS G+ F + NTL+ MYSKCGD+DSA+ +F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
M DR+ VS+T+MI+GYA++G EA++LF ME G PD+ TV ++++ C + L+
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
GK + L ++ V NAL+DMY+KCGS+ +A +F + K ++SW T+I G +
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 438 NGEFVEALDLFHQMMELD-LRPNRVTFLAVLQACTHAGFLEKG 479
N EAL LF+ ++E P+ T VL AC +KG
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 198/422 (46%), Gaps = 12/422 (2%)
Query: 117 DRDVASWNAMIVGFAQMGFLE---KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
DR V N + F + G LE K+LC+ + D T+ + Q +K L
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI-----DPRTLCSVLQLCADSKSLKD 112
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
K V +F G D ++ + Y C DLK A VF ++ + + WN ++
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK--IEKALFWNILMNEL 170
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
F S+ ++ M+ G D T + S ++ G +H + GF
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
SV N+L++ Y K +DSAR +FD M +R +SW ++I+GY G ++ L +F M +
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS 290
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G DL T++S+ +GC S + LG+ + CN L+DMYSKCG + A
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
+ +F + +++VVS+T+MIAG A G EA+ LF +M E + P+ T AVL C
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
L++G + K + ++ + + D+ + G ++EA M +K D W T
Sbjct: 411 RLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNT 468
Query: 534 LL 535
++
Sbjct: 469 II 470
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 7/320 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ + S I + A +A+ LF M++ I P+ T + CA+ + +H
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
I ++ DIFV ++DMYAKC + A +F +M +D+ SWN +I G+++ +
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 138 KVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ L LF N+ L D TV + A + +H + + G +D V N+
Sbjct: 481 EALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ YAKC L +A ++F I + +VSW +I G +++ + M G
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 256 PDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSAR 313
D + VSLL +C + +G R + + V ++ M ++ GD I + R
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657
Query: 314 FLFDGMCDRTRVSWTAMISG 333
F+ + W A++ G
Sbjct: 658 FIENMPIPPDATIWGALLCG 677
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/658 (34%), Positives = 339/658 (51%), Gaps = 56/658 (8%)
Query: 6 LPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
PP +Y WNS IR D A+K L LF M P+N TFPF+ KAC
Sbjct: 85 FPPSDAGVY------HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACG 138
Query: 66 KLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
++S + H + + F S++FV +V MY++C L A K+FD+M DV SWN+
Sbjct: 139 EISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNS 198
Query: 126 MIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 184
+I +A++G + L +F M G + D +T++ + SL K +H F +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 185 GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLN 244
+ ++ V N + YAKC + A VF + ++ VVSWN+++ G + +F+D++
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS--VKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 245 FY-----------------------------------RHMIYDGFRPDVTTVVSLLSSCV 269
+ R M+ G +P+ T++S+LS C
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 270 CPEALVQGRLVHSHGIHYGFDL-------DVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
AL+ G+ +H + I Y DL + VIN LI MY+KC +D+AR +FD + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 323 TR--VSWTAMISGYAQKGDLDEALRLFFAM--EAAGEVPDLVTVLSMISGCGQSGALELG 378
R V+WT MI GY+Q GD ++AL L M E P+ T+ + C AL +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 379 KWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
K YA + V N LIDMY+KCGSI DAR +F + K V+WT+++ G +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G EAL +F +M + + + VT L VL AC+H+G +++G YFN M V+ V+P
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+C+ DLLGR G+L AL ++ MP++ +W L C+IH +E+GEY A ++ EL
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ Y ++N+YA GRW V +R++M+ VKK PG S V T TF V D
Sbjct: 677 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGD 734
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 239/536 (44%), Gaps = 57/536 (10%)
Query: 55 LTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK 114
+T PFI K C +S ++IH ++ + + + + ++ Y L A L +
Sbjct: 30 ITPPFIHK-CKTISQV---KLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRR 84
Query: 115 MPDRD--VASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 172
P D V WN++I + G K L LF M + D T + +A +
Sbjct: 85 FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 173 LLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG 232
+S H+ + G ++V V N ++ Y++C L A VF E + VVSWNSII
Sbjct: 145 CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFD--EMSVWDVVSWNSIIES 202
Query: 233 CTYGDKFDDSLNFYRHMIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
K +L + M + G RPD T+V++L C G+ +H +
Sbjct: 203 YAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ 262
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
++ V N L+ MY+KCG +D A +F M + VSW AM++GY+Q G ++A+RLF M+
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 352 -----------------------------------AAGEVPDLVTVLSMISGCGQSGALE 376
++G P+ VT++S++SGC GAL
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 377 LGKWFDNYAC-------SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKTVVS 427
GK YA G D MV N LIDMY+KC + AR +F +L E+ VV+
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELD--LRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
WT MI G + +G+ +AL+L +M E D RPN T L AC L G
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY 502
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ Q L +C+ D+ + G + +A +M K++ W +L+ +H
Sbjct: 503 ALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTGYGMH 557
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 333/602 (55%), Gaps = 6/602 (0%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ QWN+ ++ + + + L F M +++ +P+N T P KAC +L + Y +MIH
Sbjct: 24 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 83
Query: 78 GHIVKS-PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
G + K SD++V ++++ MY KC R+ A ++FD++ D+ +W++M+ GF + G
Sbjct: 84 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP 143
Query: 137 EKVLCLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
+ + F M + + D VT++ L A + L + VH F I G D+S+ N+
Sbjct: 144 YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 203
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ YAK K A +F+ I E + V+SW+++I ++L + M+ DG
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAE--KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+V TV+ +L +C L QGR H I G + +V V L+ MY KC + A +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGA 374
F + + VSW A+ISG+ G ++ F M PD + ++ ++ C + G
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
LE K F +Y G N + +L+++YS+CGS+G+A ++F + K V WT++I G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 435 CALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
++G+ +AL+ F+ M++ +++PN VTFL++L AC+HAG + +G F LM Y++
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P L HY+ + DLLGR G L A++ + MP I GTLL AC+IH+N E+ E VA +
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 561
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LFELE + A Y+ M+N+Y + G W+ V LR +K+ +KK +SL+ I K F
Sbjct: 562 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 621
Query: 614 ED 615
+D
Sbjct: 622 DD 623
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 12/333 (3%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
R++ WN+++ + ++++ L + HM D +PD T+ L +C + G ++
Sbjct: 23 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 82
Query: 281 H---SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQK 337
H + G DL V ++LI MY KCG + A +FD + V+W++M+SG+ +
Sbjct: 83 HGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 140
Query: 338 GDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +A+ F M A +V PD VT+++++S C + LG+ + G +++ +
Sbjct: 141 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 200
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N+L++ Y+K + +A LF + EK V+SW+T+IA NG EAL +F+ MM+
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
PN T L VLQAC A LE+G L + + E+ + + D+ + +EA
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 517 DFVQSMPIKSDAGIWGTLLCACKI----HRNIE 545
+P + D W L+ + HR+IE
Sbjct: 320 AVFSRIP-RKDVVSWVALISGFTLNGMAHRSIE 351
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 5/306 (1%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
L K+ + W++ I V A +ALL+F M + EPN T + +ACA D
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ H ++ +++ V T +VDMY KC + AY +F ++P +DV SW A+I G
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 130 FAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
F G + + F M L + D + ++ + + L K HS+ I G D+
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + + + Y++C L A VF GI L+ V W S+I G K +L + H
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGI--ALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 249 MIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKC 306
M+ +P+ T +S+LS+C + +G + ++ Y ++ L+ + +
Sbjct: 458 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRV 517
Query: 307 GDIDSA 312
GD+D+A
Sbjct: 518 GDLDTA 523
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 312 ARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ 371
AR +F M R+ W ++ +++ +E L F M E PD T+ + CG+
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 372 SGALELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ G+ + L ++ V ++LI MY KCG + +A +F L + +V+W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 431 MIAGCALNGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACT-----------HAGFLEK 478
M++G NG +A++ F +M M D+ P+RVT + ++ ACT H + +
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G+ + VN LN Y+ + KEA++ + M + D W T++ AC
Sbjct: 193 GFS-----NDLSLVNSLLNCYA-------KSRAFKEAVNLFK-MIAEKDVISWSTVI-AC 238
Query: 539 KIH 541
+
Sbjct: 239 YVQ 241
Score = 40.0 bits (92), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
K S DAR++F + ++++ W T++ + ++ E L F M + +P+ T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
L+AC + G + K + +L S + + + G++ EAL + K
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-K 124
Query: 526 SDAGIWGTLL 535
D W +++
Sbjct: 125 PDIVTWSSMV 134
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 303/542 (55%), Gaps = 1/542 (0%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+ IH ++ F+ T ++ + + A ++FD +P + WNA+I G+++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
+ L ++ NM+L + D T L +A HL + + VH+ +G DADV V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
N I+ YAKC L A VF G+ RT+VSW +I+ + ++L + M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
+PD +VS+L++ C + L QGR +H+ + G +++ ++ +L +MY+KCG + +A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
LFD M + W AMISGYA+ G EA+ +F M PD +++ S IS C Q G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+LE + Y +D+V + +ALIDM++KCGS+ AR +F ++ VV W+ MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G L+G EA+ L+ M + PN VTFL +L AC H+G + +GW +FN M +++N
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKIN 456
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P+ HY+C+ DLLGR G L +A + ++ MP++ +WG LL ACK HR++E+GEY A +
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
LF ++P + YV+++N+YA WD VA +R MK + K G S V + G+ F V
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 614 ED 615
D
Sbjct: 577 GD 578
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 218/420 (51%), Gaps = 5/420 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ IR N ALL++ M+ + P++ TFP + KAC+ LS + +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD--KMPDRDVASWNAMIVGFAQMGFL 136
+ + F +D+FVQ ++ +YAKC RL A +F+ +P+R + SW A++ +AQ G
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ L +F MR + ++ D+V ++ + A + L +S+H+ + +G++ + + +
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC + A+++F ++ ++ WN++I G ++++ + MI RP
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSP--NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D ++ S +S+C +L Q R ++ + + DV + + LI M++KCG ++ AR +F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D DR V W+AMI GY G EA+ L+ AME G P+ VT L ++ C SG +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G WF N + +ID+ + G + A E+ +P + V W +++ C
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 185/376 (49%), Gaps = 6/376 (1%)
Query: 168 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
A H + LK +H+ + +G+ + I A + D+ A VF + + WN
Sbjct: 31 ATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP--QIFPWN 88
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+II G + + F D+L Y +M PD T LL +C L GR VH+
Sbjct: 89 AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRL 148
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDG--MCDRTRVSWTAMISGYAQKGDLDEALR 345
GFD DV V N LI++Y+KC + SAR +F+G + +RT VSWTA++S YAQ G+ EAL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 405
+F M PD V ++S+++ L+ G+ GL+ + +L MY+
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 406 KCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLA 465
KCG + A+ LF + ++ W MI+G A NG EA+D+FH+M+ D+RP+ ++ +
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 466 VLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK 525
+ AC G LE+ + + + ++ S + D+ + G + E V +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLD 386
Query: 526 SDAGIWGTLLCACKIH 541
D +W ++ +H
Sbjct: 387 RDVVVWSAMIVGYGLH 402
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 148/318 (46%), Gaps = 5/318 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
TI W + + E +AL +F +M+K D++P+ + + A L D + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+VK + + ++ MYAKC ++ A LFDKM ++ WNAMI G+A+ G+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 197
+ + +F+ M ++ D +++ A L +S++ + DV + + I
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 198 SAYAKCNDLKMAELVF-RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+AKC ++ A LVF R ++ R VV W+++I G + ++++ YR M G P
Sbjct: 366 DMFAKCGSVEGARLVFDRTLD---RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T + LL +C + +G + + + +I + + G +D A +
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 317 DGMCDRTRVS-WTAMISG 333
M + V+ W A++S
Sbjct: 483 KCMPVQPGVTVWGALLSA 500
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S + WN+ I A +A+ +F M D+ P+ ++ ACA++ ++
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++ ++ +S + D+F+ + ++DM+AKC ++ A +FD+ DRDV W+AMIVG+ G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + L+ M G+ + VT +GL A H+
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 307/581 (52%), Gaps = 2/581 (0%)
Query: 35 AHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
KA+ LF+RM + +EP++ T + AC+ Q +H + K F S+ ++
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 95 MVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD 154
++++YAKC ++ A F + +V WN M+V + + L +F M++ I +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + + I L L + +HS I + VC+ I YAK L A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL- 548
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I + VVSW ++I G T + D +L +R M+ G R D + + +S+C +AL
Sbjct: 549 -IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+G+ +H+ GF D+ N L+++YS+CG I+ + F+ ++W A++SG+
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 335 AQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 394
Q G+ +EALR+F M G + T S + ++ ++ GK G
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 395 MVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
VCNALI MY+KCGSI DA + F + K VSW +I + +G EALD F QM+
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 455 DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
++RPN VT + VL AC+H G ++KG YF M Y ++P+ HY C+ D+L R G L
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 847
Query: 515 ALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYAL 574
A +F+Q MPIK DA +W TLL AC +H+N+EIGE+ A+ L ELEP +A YV ++N+YA+
Sbjct: 848 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 907
Query: 575 GGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+WD R MK VKK PGQS + + +F V D
Sbjct: 908 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 948
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 256/542 (47%), Gaps = 13/542 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS-DFLYSQMI 76
TI WN I+E +N + LF RM ++ PN TF + +AC S F + I
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H I+ V ++D+Y++ +D A ++FD + +D +SW AMI G ++
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+ + LF +M ++GI + A + L + + +H + +G +D VCN
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGG---CTYGDKFDDSLNFYRHMIYDG 253
+S Y +L AE +F + + R V++N++I G C YG+K ++ ++ M DG
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEK---AMELFKRMHLDG 384
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
PD T+ SL+ +C L +G+ +H++ GF + + L+++Y+KC DI++A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 314 FLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSG 373
F V W M+ Y DL + R+F M+ VP+ T S++ C + G
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 374 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
LELG+ + + N VC+ LIDMY+K G + A ++ K VVSWTTMIA
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G +AL F QM++ +R + V + AC L++G + V +
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFS 623
Query: 494 PELNHYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAY 552
+L + + L R GK++E+ L F Q+ D W L+ + N E V
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEA--GDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 553 RL 554
R+
Sbjct: 682 RM 683
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 218/462 (47%), Gaps = 3/462 (0%)
Query: 29 AVDKNEAH-KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWS 87
+ KNE +A+ LF M I P F + AC K+ + +HG ++K F S
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 88 DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR 147
D +V +V +Y L A +F M RD ++N +I G +Q G+ EK + LF M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 148 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLK 207
L G++ D T+ L A L + +H++ +G ++ + ++ YAKC D++
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 208 MAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSS 267
A F +E + VV WN ++ D +S +R M + P+ T S+L +
Sbjct: 442 TALDYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 268 CVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW 327
C+ L G +HS I F L+ V + LI MY+K G +D+A + + VSW
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 328 TAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACS 387
T MI+GY Q D+AL F M G D V + + +S C AL+ G+ AC
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 388 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDL 447
G ++ NAL+ +YS+CG I ++ F ++W +++G +G EAL +
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
F +M + N TF + ++A + +++G ++TK
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 232/490 (47%), Gaps = 10/490 (2%)
Query: 50 IEPNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCA 108
I PN+ T ++ + C K + L + +H I+K S+ + + D Y L A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+K+FD+MP+R + +WN MI A + +V LF M + + T G+ +A
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 169 K-HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
+++ +H+ ++ G+ VCN I Y++ + +A VF G+ L+ SW
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR--LKDHSSWV 257
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
++I G + + +++ + M G P S+LS+C E+L G +H +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF D V N L+S+Y G++ SA +F M R V++ +I+G +Q G ++A+ LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M G PD T+ S++ C G L G+ Y G N + AL+++Y+KC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
I A + F + VV W M+ L + + +F QM ++ PN+ T+ ++L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 468 QACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEALDFVQSMPIK 525
+ C G LE G + +++ + N +LN Y C + D+ + GKL A D + K
Sbjct: 498 KTCIRLGDLELGE---QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 526 SDAGIWGTLL 535
D W T++
Sbjct: 555 -DVVSWTTMI 563
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N KAL FR+M I + + ACA L Q IH
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S F SD+ Q +V +Y++C +++ +Y F++ D +WNA++ GF Q G E+ L
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F M GI + T +AA ++ K VH+ G D++ VCN IS YA
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + AE F +E + VSWN+II + ++L+ + MI+ RP+ T+
Sbjct: 739 KCGSISDAEKQF--LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 262 VSLLSSC 268
V +LS+C
Sbjct: 797 VGVLSAC 803
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 324/601 (53%), Gaps = 4/601 (0%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDI-EPNNLTFPFIAKACAKLSDFLYSQM 75
S + WNS + + H L +F+R+ I P++ TFP + KA L +M
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
IH +VKS + D+ V +++V MYAK + + + ++FD+MP+RDVASWN +I F Q G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
EK L LF M G + + V++ A L K +H + G + D V +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
+ Y KC+ L++A VF+ + +++V+WNS+I G + MI +G R
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPR--KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P TT+ S+L +C L+ G+ +H + I + D+ V +LI +Y KCG+ + A +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F SW MIS Y G+ +A+ ++ M + G PD+VT S++ C Q AL
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
E GK L+ + ++ +AL+DMYSKCG+ +A +F ++P+K VVSWT MI+
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+G+ EAL F +M + L+P+ VT LAVL AC HAG +++G +F+ M Y + P
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPI 546
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWGTLLCACKIHRNIEIGEYVAYRL 554
+ HYSCM D+LGR G+L EA + +Q P SD A + TL AC +H +G+ +A L
Sbjct: 547 IEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLL 606
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
E P A+ Y+ + N+YA G WD +R MK ++K PG S + ++ K C F E
Sbjct: 607 VENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAE 666
Query: 615 D 615
D
Sbjct: 667 D 667
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 168/321 (52%), Gaps = 4/321 (1%)
Query: 161 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGL 220
L + K L +K VH + +G+ DV +C + I+ Y C D A VF + +
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD--I 67
Query: 221 RT-VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGR 278
R+ V WNS++ G + F D+L ++ ++ PD T +++ + GR
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
++H+ + G+ DV V ++L+ MY+K +++ +FD M +R SW +IS + Q G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+ ++AL LF ME++G P+ V++ IS C + LE GK G + + V +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+DMY KC + ARE+F +P K++V+W +MI G G+ +++ ++M+ RP
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 459 NRVTFLAVLQACTHAGFLEKG 479
++ T ++L AC+ + L G
Sbjct: 308 SQTTLTSILMACSRSRNLLHG 328
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/614 (33%), Positives = 319/614 (51%), Gaps = 71/614 (11%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+Y + +H ++KS F ++IF+Q ++D Y+KC L+ ++FDKMP R++ +WN+++ G
Sbjct: 37 IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96
Query: 131 AQMGFL-------------------------------EKVLCLFYNMRLVGIQADFVTVM 159
++GFL E+ LC F M G + +
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 160 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEG 219
+ A ++ VHS +DV + + + Y+KC ++ A+ VF E G
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD--EMG 214
Query: 220 LRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRL 279
R VVSWNS+I ++L+ ++ M+ PD T+ S++S+C A+ G+
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 280 VHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM------------------- 319
VH + + D+ + N + MY+KC I ARF+FD M
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 320 ------------CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
+R VSW A+I+GY Q G+ +EAL LF ++ P + +++
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 368 GCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDMYSKCGSIGDARELFYALP 421
C L LG + G K D++ V N+LIDMY KCG + + +F +
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
E+ VSW MI G A NG EAL+LF +M+E +P+ +T + VL AC HAGF+E+G
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YF+ MT+ + V P +HY+CM DLLGR G L+EA ++ MP++ D+ IWG+LL ACK+H
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
RNI +G+YVA +L E+EP ++ PYV ++N+YA G+W+ V N+R M++ V K PG S
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 602 VHINGKTCTFTVED 615
+ I G F V+D
Sbjct: 635 IKIQGHDHVFMVKD 648
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 233/475 (49%), Gaps = 44/475 (9%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + +AL F M K N +F + AC+ L+D +H I
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KSPF SD+++ + +VDMY+KC ++ A ++FD+M DR+V SWN++I F Q G + L
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISAY 200
+F M ++ D VT+ + A + + + VH + + + D+ + N ++ Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 201 AKCNDLKMAELVFRGI-----------------------------EEGLRTVVSWNSIIG 231
AKC+ +K A +F + + R VVSWN++I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G T + +++L+ + + + P + ++L +C L G H H + +GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 292 ------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALR 345
D+ V N+LI MY KCG ++ +F M +R VSW AMI G+AQ G +EAL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 346 LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG---LKDNVMVCNALI 401
LF M +GE PD +T++ ++S CG +G +E G+ +F + G L+D+ ++
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY---TCMV 536
Query: 402 DMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
D+ + G + +A+ + +P + V W +++A C ++ + +++E++
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 591
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 9/176 (5%)
Query: 1 MAASSLPPRL--NKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFP 58
MAAS+ RL K+ + ++ WN+ I E +AL LF +K+ + P + +F
Sbjct: 332 MAASTKAARLMFTKMAERNVVS-WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSPF------WSDIFVQTTMVDMYAKCDRLDCAYKLF 112
I KACA L++ H H++K F DIFV +++DMY KC ++ Y +F
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 113 DKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
KM +RD SWNAMI+GFAQ G+ + L LF M G + D +T++G+ A HA
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 325/594 (54%), Gaps = 4/594 (0%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVK 82
N + E + + L F M ++D+E + +TF + K+ Q +H +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 83 SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCL 142
+ V ++++MY K + A +FD M +RD+ SWN++I G AQ G + +CL
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 143 FYNMRLVGIQADFVTVMGLTQAAIH-AKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F + G++ D T+ + +AA + LSL K VH I I +D V I AY+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+ +K AE++F E +V+WN+++ G T +L + M G R D T+
Sbjct: 464 RNRCMKEAEILF---ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
++ +C A+ QG+ VH++ I G+DLD+ V + ++ MY KCGD+ +A+F FD +
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
V+WT MISG + G+ + A +F M G +PD T+ ++ ALE G+
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
A ++ V +L+DMY+KCGSI DA LF + + +W M+ G A +GE
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSC 501
E L LF QM L ++P++VTF+ VL AC+H+G + + + + M Y + PE+ HYSC
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSC 760
Query: 502 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHS 561
+AD LGR G +K+A + ++SM +++ A ++ TLL AC++ + E G+ VA +L ELEP
Sbjct: 761 LADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLD 820
Query: 562 AAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ YV ++N+YA +WD + RTMMK ++VKK PG S + + K F V+D
Sbjct: 821 SSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDD 874
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 235/537 (43%), Gaps = 56/537 (10%)
Query: 22 WNS------QIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
WNS Q E V +N +A LLFR ++++ + + +T + K C S+
Sbjct: 108 WNSILAAYAQSSECVVEN-IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
HG+ K D FV +V++Y K ++ LF++MP RDV WN M+ + +MGF
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
E+ + L G+ + +T+ L + + G D+D
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARIS-------------------GDDSDAG---- 263
Query: 196 WISAYAKCNDL-KMAELVFR--GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ ++A ND ++E++FR G+ E L + ++ L + M+
Sbjct: 264 QVKSFANGNDASSVSEIIFRNKGLSEYL--------------HSGQYSALLKCFADMVES 309
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
D T + +L++ V ++L G+ VH + G DL ++V N+LI+MY K A
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 313 RFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQ- 371
R +FD M +R +SW ++I+G AQ G EA+ LF + G PD T+ S++
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 372 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTM 431
L L K +A + V ALID YS+ + +A E+ + +V+W M
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAM 488
Query: 432 IAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+AG + + + L LF M + R + T V + C + +G K
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-G 547
Query: 492 VNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGE 548
+ +L S + D+ + G + A S+P+ D W T++ C IE GE
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC-----IENGE 598
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 194/424 (45%), Gaps = 48/424 (11%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP 116
F F+ A SD + + H I+ + F+ ++ MY+KC L A ++FDKMP
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 117 DRDVASWNAMIVGFAQ-----MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
DRD+ SWN+++ +AQ + +++ LF +R + +T+ + + +H+ ++
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+S H + IG+D D V ++ Y K +K +++F E R VV WN +
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFE--EMPYRDVVLWNLM-- 217
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
L Y M GF+ EA+ HS G++ ++
Sbjct: 218 -----------LKAYLEM---GFK---------------EEAIDLSSAFHSSGLNPN-EI 247
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM----ISGYAQKGDLDEALRLF 347
+ ++ + S G + S F D + VS +S Y G L+ F
Sbjct: 248 TLRLLARISGDDSDAGQVKS----FANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCF 303
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
M + D VT + M++ + +L LG+ A GL + V N+LI+MY K
Sbjct: 304 ADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL 363
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVL 467
G AR +F + E+ ++SW ++IAG A NG VEA+ LF Q++ L+P++ T +VL
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 468 QACT 471
+A +
Sbjct: 424 KAAS 427
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 149/328 (45%), Gaps = 6/328 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ + ++ HK L LF M K ++ T + K C L + +H + +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS + D++V + ++DMY KC + A FD +P D +W MI G + G E+
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F MRL+G+ D T+ L +A+ L + +H+ + + D V + + YA
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC + A +F+ IE + + +WN+++ G + ++L ++ M G +PD T
Sbjct: 665 KCGSIDDAYCLFKRIE--MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
+ +LS+C LV H +H YG ++ + L + G + A L + M
Sbjct: 723 IGVLSAC-SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Query: 320 CDRTRVS-WTAMISGYAQKGDLDEALRL 346
S + +++ +GD + R+
Sbjct: 782 SMEASASMYRTLLAACRVQGDTETGKRV 809
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA 65
I WN+ + E + L LF++MK I+P+ +TF + AC+
Sbjct: 684 ITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 332/591 (56%), Gaps = 18/591 (3%)
Query: 33 NEA-HKALLLFRRMKKN-DIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
NE+ H +L +F ++K+ D++PN+ T+ F A + D ++IHG V S++
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLV 149
+ + +V MY K R++ A K+FD+MP++D WN MI G+ + + + +F ++
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
+ D T++ + A + L L +HS G + V +IS Y+KC +KM
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 210 ELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCV 269
+FR + +V++N++I G T + + SL+ ++ ++ G R +T+VSL+
Sbjct: 276 SALFREFRKP--DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP--- 330
Query: 270 CPEALVQGRL-----VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTR 324
V G L +H + + F SV L ++YSK +I+SAR LFD +++
Sbjct: 331 -----VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 325 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNY 384
SW AMISGY Q G ++A+ LF M+ + P+ VT+ ++S C Q GAL LGKW +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 385 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEA 444
S + ++ V ALI MY+KCGSI +AR LF + +K V+W TMI+G L+G+ EA
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 445 LDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMAD 504
L++F++M+ + P VTFL VL AC+HAG +++G FN M Y P + HY+CM D
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
+LGR G L+ AL F+++M I+ + +W TLL AC+IH++ + V+ +LFEL+P +
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 565 YVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+V ++NI++ + A +R K+ ++ K PG +L+ I FT D
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGD 676
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ WN+ I A+ LFR M+K++ PN +T I ACA+L + +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
+ + F S I+V T ++ MYAKC + A +LFD M ++ +WN MI G+ G +
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 138 KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDADVSVCNTW 196
+ L +FY M GI VT + + A HA + + + IH G + V
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 197 ISAYAKCNDLKMAELVFRG--IEEGLRTVVSWNSIIGGC 233
+ + L+ A IE G W +++G C
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIEPGSSV---WETLLGAC 599
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 280 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGD 339
H+ I +GF D+S++ L S G I AR +F + + ++ G++
Sbjct: 39 THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 340 LDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+L +F + + ++ P+ T IS G+ A G +++ +
Sbjct: 99 PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM-ELDLR 457
++ MY K + DAR++F +PEK + W TMI+G N +VE++ +F ++ E R
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 458 PNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+ T L +L A L G +L TK
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
G ++++ + L S G+I AR++F ++ V + ++ G ++N +L +F
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106
Query: 449 -HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG-YFNLMTKVYQVNPELNHYSCMADLL 506
H DL+PN T+ + A + GF + G + V + EL S + +
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAAS--GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMY 164
Query: 507 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ ++++A MP K D +W T++
Sbjct: 165 FKFWRVEDARKVFDRMPEK-DTILWNTMI 192
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/627 (33%), Positives = 339/627 (54%), Gaps = 35/627 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
+NS IR ++A+LLF RM + I P+ TFPF ACAK IHG IV
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + D+FVQ ++V YA+C LD A K+FD+M +R+V SW +MI G+A+ F + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 142 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF+ M R + + VT++ + A + L + V++F + G++ + + + + Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
KCN + +A+ +F E G + N++ ++L + M+ G RPD +
Sbjct: 282 MKCNAIDVAKRLFD--EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++S +SSC ++ G+ H + + GF+ ++ N LI MY KC D+A +FD M
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 321 DRTRVSWTAMISGYAQKGDLD-------------------------------EALRLFFA 349
++T V+W ++++GY + G++D EA+ +F +
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 350 MEAA-GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 408
M++ G D VT++S+ S CG GAL+L KW Y G++ +V + L+DM+S+CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 409 SIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQ 468
A +F +L + V +WT I A+ G A++LF M+E L+P+ V F+ L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 469 ACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 528
AC+H G +++G F M K++ V+PE HY CM DLLGR G L+EA+ ++ MP++ +
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 529 GIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMM 588
IW +LL AC++ N+E+ Y A ++ L P YV ++N+YA GRW+ +A +R M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 589 KRNQVKKFPGQSLVHINGKTCTFTVED 615
K ++K PG S + I GKT FT D
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGD 726
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 5/310 (1%)
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKC---NDLKMAELVFRGIEEGLRTV 223
+ K + LK H G+D DVS ++ + L A+ VF E T
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN-SESYGTC 99
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
+NS+I G ++++ + M+ G PD T LS+C A G +H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
+ G+ D+ V N+L+ Y++CG++DSAR +FD M +R VSWT+MI GYA++ +A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 344 LRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
+ LFF M EV P+ VT++ +IS C + LE G+ + + G++ N ++ +AL+D
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MY KC +I A+ LF + M + G EAL +F+ MM+ +RP+R++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 463 FLAVLQACTH 472
L+ + +C+
Sbjct: 340 MLSAISSCSQ 349
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 173/384 (45%), Gaps = 54/384 (14%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
A + RL Y +S ++ N+ V + +AL +F M + + P+ ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDK-------- 114
+C++L + L+ + HG+++++ F S + ++DMY KC R D A+++FD+
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 115 -----------------------MPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMR-LVG 150
MP++++ SWN +I G Q E+ + +F +M+ G
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
+ AD VT+M + A H L L K ++ + G+ DV + T + +++C D + A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
+F + R V +W + IG + ++ + MI G +PD V L++C
Sbjct: 526 SIFNSLTN--RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 583
Query: 271 PEALVQGR-----LVHSHG-----IHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM- 319
+ QG+ ++ HG +HYG ++ + + G ++ A L + M
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYG---------CMVDLLGRAGLLEEAVQLIEDMP 634
Query: 320 CDRTRVSWTAMISGYAQKGDLDEA 343
+ V W ++++ +G+++ A
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMA 658
Score = 33.5 bits (75), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCG---SIGDARELFY-ALPEKTVVSWTTMIAG 434
K F GL ++V L+ + G S+ A+E+F + T + ++I G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
A +G EA+ LF +MM + P++ TF L AC + G L+ K+
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 316/575 (54%), Gaps = 3/575 (0%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAK 101
F M+ + I PN +TF + CA +HG +V S + ++ +++ MY+K
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 102 CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGL 161
C R D A KLF M D +WN MI G+ Q G +E+ L FY M G+ D +T L
Sbjct: 287 CGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 162 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLR 221
+ ++L K +H + + + D+ + + I AY KC + MA+ +F
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS--V 404
Query: 222 TVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
VV + ++I G + + DSL +R ++ P+ T+VS+L AL GR +H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
I GFD ++ +I MY+KCG ++ A +F+ + R VSW +MI+ AQ +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
A+ +F M +G D V++ + +S C + GK + L +V + LI
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 402 DMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD-LRPNR 460
DMY+KCG++ A +F + EK +VSW ++IA C +G+ ++L LFH+M+E +RP++
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
+TFL ++ +C H G +++G +F MT+ Y + P+ HY+C+ DL GR G+L EA + V+
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
SMP DAG+WGTLL AC++H+N+E+ E + +L +L+P ++ YV ++N +A W+
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
V +R++MK +V+K PG S + IN +T F D
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGD 799
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 255/531 (48%), Gaps = 4/531 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
R S+I WNS I V ++AL + +M + P+ TFP + KAC L +F
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ + + FV ++++ Y + ++D KLFD++ +D WN M+ G+A+ G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
L+ V+ F MR+ I + VT + + L +H + GVD + S+ N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ +S Y+KC A +FR + V+WN +I G ++SL F+ MI G
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRA--DTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
PD T SLL S E L + +H + + + LD+ + + LI Y KC + A+
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F V +TAMISGY G ++L +F + P+ +T++S++ G A
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAG 434
L+LG+ + G + + A+IDMY+KCG + A E+F L ++ +VSW +MI
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
CA + A+D+F QM + + V+ A L AC + G M K + +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLAS 575
Query: 495 ELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ S + D+ + G LK A++ ++M K+ W +++ AC H ++
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLK 625
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 226/489 (46%), Gaps = 8/489 (1%)
Query: 52 PNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKL 111
P L+ + +AC+ + + +H ++ + D + ++ MYA C K+
Sbjct: 35 PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 112 FDKMPDR--DVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAK 169
F ++ R + WN++I F + G L + L ++ M G+ D T L +A + K
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK 152
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSI 229
+ + + +G+D + V ++ I AY + + + +F + + + V WN +
Sbjct: 153 NFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ--KDCVIWNVM 210
Query: 230 IGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGF 289
+ G D + + M D P+ T +LS C + G +H + G
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D + S+ N+L+SMYSKCG D A LF M V+W MISGY Q G ++E+L F+
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 350 MEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
M ++G +PD +T S++ + LE K Y + ++ + +ALID Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 410 IGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+ A+ +F VV +T MI+G NG ++++L++F ++++ + PN +T +++L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 470 CTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 529
L+ G + K + N + D+ + G++ A + + + K D
Sbjct: 451 IGILLALKLGRELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIV 508
Query: 530 IWGTLLCAC 538
W +++ C
Sbjct: 509 SWNSMITRC 517
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I + A+ +FR+M + I + ++ ACA L + + IHG
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K SD++ ++T++DMYAKC L A +F M ++++ SWN++I G L+
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 139 VLCLFYNM-RLVGIQADFVTVMGLTQAAIH 167
LCLF+ M GI+ D +T + + + H
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCH 656
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/601 (34%), Positives = 327/601 (54%), Gaps = 14/601 (2%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
PR+N I W+ IR + A KAL L+ +M + + P T+PF+ KACA L
Sbjct: 64 PRINPI-------AWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGL 116
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
++IH H+ S F +D++V T +VD YAKC L+ A K+FD+MP RD+ +WNAMI
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 128 VGFAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
GF+ L V+ LF +MR + G+ + T++G+ A A L K+VH + +G
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D+ V + YAK + A VF + + V+W+++IGG + ++ +
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVFD--LDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 247 RHMIYDGFRPDVTTVVS--LLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 304
M+ + VT V +L C L GR VH + + GF LD++V NT+IS Y+
Sbjct: 295 FQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYA 354
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
K G + A F + + +S+ ++I+G +E+ RLF M +G PD+ T+L
Sbjct: 355 KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
+++ C AL G Y G N +CNAL+DMY+KCG + A+ +F + ++
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRD 474
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+VSW TM+ G ++G EAL LF+ M E + P+ VT LA+L AC+H+G +++G FN
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFN 534
Query: 485 LMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRN 543
M++ + V P ++HY+CM DLL R G L EA DFV MP + D + GTLL AC ++N
Sbjct: 535 SMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKN 594
Query: 544 IEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
E+G V+ ++ L + V ++N Y+ RW+ A +R + K+ + K PG S V
Sbjct: 595 AELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Query: 604 I 604
+
Sbjct: 654 V 654
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 239/494 (48%), Gaps = 16/494 (3%)
Query: 57 FPFIAKACAKLSDFLYSQMIHGHIVKSPF-WSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
F + + C + + + Q+IH H++K S V + +YA C+ ++ A +FD++
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 116 PDRDV--ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 173
P + +W+ MI +A F EK L L+Y M G++ T + +A + +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
K +HS D+ VC + YAKC +L+MA VF + + R +V+WN++I G
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPK--RDMVAWNAMISGF 179
Query: 234 TYGDKFDDSLNFYRHM-IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
+ D + + M DG P+++T+V + + AL +G+ VH + GF D
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ V ++ +Y+K I AR +FD + V+W+AMI GY + + EA +FF M
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 353 AGEVPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
V + V + ++ GC + G L G+ YA G ++ V N +I Y+K GS+
Sbjct: 300 NDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
DA F + K V+S+ ++I GC +N E+ LFH+M +RP+ T L VL AC
Sbjct: 360 CDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 471 THAGFLEKG---WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSD 527
+H L G GY + Y VN + + + D+ + GKL A +M K D
Sbjct: 420 SHLAALGHGSSCHGY--CVVHGYAVNTSI--CNALMDMYTKCGKLDVAKRVFDTMH-KRD 474
Query: 528 AGIWGTLLCACKIH 541
W T+L IH
Sbjct: 475 IVSWNTMLFGFGIH 488
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 358 bits (919), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 209/590 (35%), Positives = 309/590 (52%), Gaps = 64/590 (10%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
F T++ Y+K +D + FD++P RD SW MIVG+ +G K + + +M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMA 209
GI+ T+ + + + + K VHSF + +G+ +VSV N+ ++ YAKC D MA
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 210 ELVF-----RGI------------------------EEGLRTVVSWNSIIGGCTYGDKFD 240
+ VF R I + R +V+WNS+I G
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 241 DSLNFYRHMIYDGF-RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+L+ + M+ D PD T+ S+LS+C E L G+ +HSH + GFD+ V+N L
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 300 ISMYSKCGDIDSARFL---------------------------------FDGMCDRTRVS 326
ISMYS+CG +++AR L F + DR V+
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 327 WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYAC 386
WTAMI GY Q G EA+ LF +M G+ P+ T+ +M+S +L GK A
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 387 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEAL 445
G +V V NALI MY+K G+I A F + E+ VSWT+MI A +G EAL
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 446 DLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADL 505
+LF M+ LRP+ +T++ V ACTHAG + +G YF++M V ++ P L+HY+CM DL
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 506 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPY 565
GR G L+EA +F++ MPI+ D WG+LL AC++H+NI++G+ A RL LEP ++ Y
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 566 VEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+AN+Y+ G+W+ A +R MK +VKK G S + + K F VED
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVED 670
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 221/483 (45%), Gaps = 66/483 (13%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + + HKA+ + M K IEP T + + A + +H IV
Sbjct: 114 WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV 173
Query: 82 KSPFWSDIFVQTTMVDMYAKC----------DRL---------------------DCAYK 110
K ++ V ++++MYAKC DR+ D A
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 111 LFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAK 169
F++M +RD+ +WN+MI GF Q G+ + L +F M R + D T+ + A + +
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 170 HLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF--RGIE----EGL--- 220
L + K +HS + G D V N IS Y++C ++ A + RG + EG
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 221 ----------------------RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
R VV+W ++I G + +++N +R M+ G RP+
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS 413
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ ++LS +L G+ +H + G VSV N LI+MY+K G+I SA FD
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDL 473
Query: 319 M-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
+ C+R VSWT+MI AQ G +EAL LF M G PD +T + + S C +G +
Sbjct: 474 IRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQ 533
Query: 378 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGC 435
G+ +FD + + ++D++ + G + +A+E +P E VV+W ++++ C
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Query: 436 ALN 438
++
Sbjct: 594 RVH 596
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 66/265 (24%)
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
+LVH I G V ++N L+++YSK G AR LFD M RT SW ++S Y++
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 337 KGDLD-------------------------------EALRLFFAMEAAGEVPDLVTVLSM 365
+GD+D +A+R+ M G P T+ ++
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG----------------- 408
++ + +E GK ++ GL+ NV V N+L++MY+KCG
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 409 -----------SIGD---ARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMEL 454
+G A F + E+ +V+W +MI+G G + ALD+F +M+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 455 D-LRPNRVTFLAVLQACTHAGFLEK 478
L P+R T +VL AC + LEK
Sbjct: 273 SLLSPDRFTLASVLSACAN---LEK 294
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 37 KALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMV 96
+A+ LFR M PN+ T + + L+ + + IHG VKS + V ++
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 97 DMYAKCDRLDCAYKLFDKMP-DRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
MYAK + A + FD + +RD SW +MI+ AQ G E+ L LF M + G++ D
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
+T +G+ A HA ++ + F + VD + +S YA DL + +
Sbjct: 516 ITYVGVFSACTHAGLVN--QGRQYFDMMKDVDKIIPT----LSHYACMVDLFGRAGLLQE 569
Query: 216 IEEGLRT------VVSWNSIIGGCTYGDKFD 240
+E + VV+W S++ C D
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 321/600 (53%), Gaps = 9/600 (1%)
Query: 22 WNSQIREAVDK---NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
WNS I + ++ + LFR M+ DI PN T I KA + L + H
Sbjct: 83 WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE- 137
+VK + DI+V T++V MY K ++ K+F MP+R+ +W+ M+ G+A G +E
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 138 --KVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 195
KV LF + G +D+V L+ A ++ L + +H I G+ V++ N
Sbjct: 203 AIKVFNLFLREKEEGSDSDYVFTAVLSSLAA-TIYVGLGRQIHCITIKNGLLGFVALSNA 261
Query: 196 WISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFR 255
++ Y+KC L A +F G R ++W++++ G + + +++ + M G +
Sbjct: 262 LVTMYSKCESLNEACKMFD--SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P T+V +L++C L +G+ +HS + GF+ + L+ MY+K G + AR
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
FD + +R WT++ISGY Q D +EAL L+ M+ AG +P+ T+ S++ C L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGC 435
ELGK + G V + +AL MYSKCGS+ D +F P K VVSW MI+G
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 436 ALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
+ NG+ EAL+LF +M+ + P+ VTF+ ++ AC+H GF+E+GW YFN+M+ ++P+
Sbjct: 500 SHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPK 559
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
++HY+CM DLL R G+LKEA +F++S I +W LL ACK H E+G Y +L
Sbjct: 560 VDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLM 619
Query: 556 ELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L ++ YV+++ IY GR V + M+ N V K G S + + + F V D
Sbjct: 620 ALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGD 679
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 226/439 (51%), Gaps = 9/439 (2%)
Query: 47 KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLD 106
+ ++ P+ T ++ + + + +HG I+++ + I +V+ YAKC +L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 107 CAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK---VLCLFYNMRLVGIQADFVTVMGLTQ 163
A+ +F+ + +DV SWN++I G++Q G + V+ LF MR I + T+ G+ +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
A + ++ + H+ + + D+ V + + Y K ++ VF + E R
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE--RNT 184
Query: 224 VSWNSIIGGCTYGDKFDDSL---NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLV 280
+W++++ G + ++++ N + +G D ++LSS + GR +
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQI 243
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
H I G V++ N L++MYSKC ++ A +FD DR ++W+AM++GY+Q G+
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
EA++LF M +AG P T++ +++ C LE GK ++ G + ++ AL
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
+DMY+K G + DAR+ F L E+ V WT++I+G N + EAL L+ +M + PN
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 461 VTFLAVLQACTHAGFLEKG 479
T +VL+AC+ LE G
Sbjct: 424 PTMASVLKACSSLATLELG 442
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 185/380 (48%), Gaps = 19/380 (5%)
Query: 167 HAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVV 224
H++ +L+ ++VH I G + N ++ YAKC L A +F I + VV
Sbjct: 24 HSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII--CKDVV 81
Query: 225 SWNSIIGGCTYGDKFDDS---LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVH 281
SWNS+I G + S + +R M P+ T+ + + ++ GR H
Sbjct: 82 SWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAH 141
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ + D+ V +L+ MY K G ++ +F M +R +W+ M+SGYA +G ++
Sbjct: 142 ALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVE 201
Query: 342 EALR---LFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
EA++ LF + G D V +++S + + LG+ GL V + N
Sbjct: 202 EAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+ MYSKC S+ +A ++F + ++ ++W+ M+ G + NGE +EA+ LF +M ++P
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKP 320
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA--- 515
+ T + VL AC+ +LE+G + + K+ L + + D+ + G L +A
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKG 379
Query: 516 LDFVQSMPIKSDAGIWGTLL 535
D +Q + D +W +L+
Sbjct: 380 FDCLQ----ERDVALWTSLI 395
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 331/595 (55%), Gaps = 16/595 (2%)
Query: 22 WNSQIR---EAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
WN I A + +E + LF M + + P+ TFP + KAC + D IH
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+K F D++V +++ +Y++ + A LFD+MP RD+ SWNAMI G+ Q G ++
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
L L +R + D VTV+ L A A + ++HS+ I G+++++ V N I
Sbjct: 235 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
YA+ L+ + VF + +R ++SWNSII ++ +++ ++ M +PD
Sbjct: 291 LYAEFGRLRDCQKVFDRMY--VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFD 317
T++SL S + R V + G+ L D+++ N ++ MY+K G +DSAR +F+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALE 376
+ + +SW +ISGYAQ G EA+ ++ ME GE+ + T +S++ C Q+GAL
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G GL +V V +L DMY KCG + DA LFY +P V W T+IA
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G +A+ LF +M++ ++P+ +TF+ +L AC+H+G +++G F +M Y + P L
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM D+ GR G+L+ AL F++SM ++ DA IWG LL AC++H N+++G+ + LFE
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 648
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
+EP +V ++N+YA G+W+GV +R++ ++K PG S + ++ K F
Sbjct: 649 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVF 703
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 239/475 (50%), Gaps = 20/475 (4%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H +V S ++ + +V++Y + A FD + +RDV +WN MI G+ +
Sbjct: 70 AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 133 MGFLEKVL-CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
G +V+ C M G+ D+ T + +A + + +H + G DV
Sbjct: 130 AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA---CRTVIDGNKIHCLALKFGFMWDVY 186
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
V + I Y++ + A ++F E +R + SWN++I G ++L +
Sbjct: 187 VAASLIHLYSRYKAVGNARILFD--EMPVRDMGSWNAMISGYCQSGNAKEALT-----LS 239
Query: 252 DGFRP-DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+G R D TVVSLLS+C +G +HS+ I +G + ++ V N LI +Y++ G +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
+ +FD M R +SW ++I Y A+ LF M + PD +T++S+ S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 371 QSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWT 429
Q G + + + G +++ + NA++ MY+K G + AR +F LP V+SW
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 430 TMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
T+I+G A NG EA+++++ M E ++ N+ T+++VL AC+ AG L +G L +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG---MKLHGR 476
Query: 489 VYQVNPELNHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ + L+ + + +AD+ G+ G+L++AL +P + ++ W TL+ H
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFH 530
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 17/288 (5%)
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGY 334
+ RLV S I +V + L+++Y G++ AR FD + +R +W MISGY
Sbjct: 73 LHARLVVSKQIQ-----NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 335 AQKGDLDEALRLF-FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
+ G+ E +R F M ++G PD T S++ C + G A G +
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWD 184
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
V V +LI +YS+ ++G+AR LF +P + + SW MI+G +G EAL L + +
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLK 513
+D VT +++L ACT AG +G + K + + EL + + DL G+L+
Sbjct: 245 MD----SVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLR 299
Query: 514 EALDFVQSMPIKSDAGIWGTLLCACKIHRNI--EIGEYVAYRLFELEP 559
+ M ++ D W +++ A +++ I + RL ++P
Sbjct: 300 DCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 357 bits (916), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/615 (34%), Positives = 319/615 (51%), Gaps = 24/615 (3%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ I V N AL F+ M+K + + + + ++CA LS+ +H H +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS F +D V+T +DMYAKCD + A LFD + + S+NAMI G++Q K L
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF+ + G+ D +++ G+ +A K LS ++ I + DV V N I Y
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC L A VF + R VSWN+II K ++L + M+ PD T
Sbjct: 429 KCQALAEAFRVFDEMRR--RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+L +C +L G +HS + G + SV +LI MYSKCG I+ A +
Sbjct: 487 GSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 322 RTRVS--------------------WTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
R VS W ++ISGY K ++A LF M G PD T
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+++ C + LGK L+ +V +C+ L+DMYSKCG + D+R +F
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ V+W MI G A +G+ EA+ LF +M+ +++PN VTF+++L+AC H G ++KG
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YF +M + Y ++P+L HYS M D+LG+ GK+K AL+ ++ MP ++D IW TLL C IH
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 785
Query: 542 R-NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
R N+E+ E L L+P ++ Y ++N+YA G W+ V++LR M+ ++KK PG S
Sbjct: 786 RNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 845
Query: 601 LVHINGKTCTFTVED 615
V + + F V D
Sbjct: 846 WVELKDELHVFLVGD 860
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 256/558 (45%), Gaps = 35/558 (6%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WNS + + E+ K++ +F M + IE + TF I K C+ L D IHG +V
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ +D+ + ++DMYAK R + ++F +P+++ SW+A+I G Q L L
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
F M+ V + ++ L L +H+ + AD V + YA
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC++++ A+++F E R S+N++I G + + +L + ++ G D ++
Sbjct: 328 KCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
+ +C + L +G ++ I LDV V N I MY KC + A +FD M
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
R VSW A+I+ + Q G E L LF +M + PD T S++ C G+L G
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEI 504
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL---FYALP----------------- 421
+ G+ N V +LIDMYSKCG I +A ++ F+
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
++ VSW ++I+G + + +A LF +MME+ + P++ T+ VL C A G G
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLASAGLG 622
Query: 482 YFNLMTKVYQVNPELNHYSC--MADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCAC 538
+ +V + + + Y C + D+ + G L ++ L F +S+ + D W ++C
Sbjct: 623 K-QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL--RRDFVTWNAMICGY 679
Query: 539 KIHRNIEIGEYVAYRLFE 556
H E A +LFE
Sbjct: 680 AHHGKGE----EAIQLFE 693
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 205/455 (45%), Gaps = 35/455 (7%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQT-------------- 93
N + N F F+ K CAK + H H++ S F FV
Sbjct: 44 NSVSTTN--FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVS 101
Query: 94 -----------------TMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
M++ Y+K + + A F+ MP RDV SWN+M+ G+ Q G
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K + +F +M GI+ D T + + + SL +H + +G D DV +
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAK + VF+GI E + VSW++II GC + +L F++ M
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPE--KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ S+L SC L G +H+H + F D V + MY+KC ++ A+ LF
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF 339
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + R S+ AMI+GY+Q+ +AL LF + ++G D +++ + C L
Sbjct: 340 DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G A L +V V NA IDMY KC ++ +A +F + + VSW +IA
Sbjct: 400 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT 471
NG+ E L LF M+ + P+ TF ++L+ACT
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 153/353 (43%), Gaps = 12/353 (3%)
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV N I+ Y+K ND+ A F + +R VVSWNS++ G + S+ +
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMP--VRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M +G D T +L C E G +H + G D DV + L+ MY+K
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ +F G+ ++ VSW+A+I+G Q L AL+ F M+ S++
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C L LG +A + +V A +DMY+KC ++ DA+ LF S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 429 TTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
MI G + +AL LFH++M L + ++ V +AC L +G + L K
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 489 VYQVNPELNHYSCMA----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
L+ C+A D+ G+ L EA M + DA W ++ A
Sbjct: 411 -----SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD----LDVSVINTLIS 301
+ HMI GFRP + LL V +V FD DV N +I+
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV--------FDKMPLRDVVSWNKMIN 122
Query: 302 MYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
YSK D+ A F+ M R VSW +M+SGY Q G+ +++ +F M G D T
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
++ C LG G +V+ +AL+DMY+K ++ +F +P
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP 242
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
EK VSW+ +IAGC N AL F +M +++ ++ + +VL++C L G
Sbjct: 243 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 206/612 (33%), Positives = 326/612 (53%), Gaps = 9/612 (1%)
Query: 9 RLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE----PNNLTFPFIAKAC 64
+L I + WNS IR D + ++ LL M + + + P+ T + C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 65 AKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWN 124
A+ + + +HG VK ++ + ++DMY+KC + A +F +++V SWN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 125 AMIVGFAQMGFLEKVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
M+ GF+ G + M G ++AD VT++ H L LK +H + +
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
+ V N ++++YAKC L A+ VF GI +TV SWN++IGG + S
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS--KTVNSWNALIGGHAQSNDPRLS 480
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
L+ + M G PD TV SLLS+C ++L G+ VH I + D+ V +++S+
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y CG++ + + LFD M D++ VSW +I+GY Q G D AL +F M G +++
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+ + C +L LG+ YA L+D+ + +LIDMY+K GSI + ++F L E
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY 482
K+ SW MI G ++G EA+ LF +M P+ +TFL VL AC H+G + +G Y
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCACKIH 541
+ M + + P L HY+C+ D+LGR G+L +AL V + M ++D GIW +LL +C+IH
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 780
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+N+E+GE VA +LFELEP YV ++N+YA G+W+ V +R M ++K G S
Sbjct: 781 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 840
Query: 602 VHINGKTCTFTV 613
+ +N K +F V
Sbjct: 841 IELNRKVFSFVV 852
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 259/535 (48%), Gaps = 13/535 (2%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALL--LFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
RS + QWN+ I + +NE + +L + D+ P++ T+P + KACA +SD
Sbjct: 147 RSKNLFQWNAVI-SSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+HG +VK+ D+FV +V Y + A +LFD MP+R++ SWN+MI F+
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 133 MGFLEKVLCLFYNMRLV----GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
GF E+ L M D T++ + + + L K VH + + + +D
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
++ + N + Y+KC + A+++F+ + VVSWN+++GG + + + R
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 249 MIYDG--FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M+ G + D T+++ + C L + +H + + F + V N ++ Y+KC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
G + A+ +F G+ +T SW A+I G+AQ D +L M+ +G +PD TV S++
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S C + +L LGK + L+ ++ V +++ +Y CG + + LF A+ +K++V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SW T+I G NG AL +F QM+ ++ ++ + V AC+ L G
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
K + + + + D+ + G + ++ + KS A W ++ IH
Sbjct: 624 LK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIH 676
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 199/429 (46%), Gaps = 10/429 (2%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD 117
+ +A K D + IH + S +D + T ++ MYA C D + +FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 118 RDVASWNAMIVGFAQMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKS 176
+++ WNA+I +++ ++VL F M + D T + +A + + +
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 177 VHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYG 236
VH + G+ DV V N +S Y + A +F + E R +VSWNS+I +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNSMIRVFSDN 266
Query: 237 DKFDDSLNFYRHMIYD----GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD 292
++S M+ + F PDV T+V++L C + G+ VH + D +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 293 VSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 352
+ + N L+ MYSKCG I +A+ +F ++ VSW M+ G++ +GD + M A
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 353 AGE--VPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
GE D VT+L+ + C L K Y+ N +V NA + Y+KCGS+
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
A+ +F+ + KTV SW +I G A + + +LD QM L P+ T ++L AC
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 471 THAGFLEKG 479
+ L G
Sbjct: 507 SKLKSLRLG 515
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 299 LISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-VP 357
+I+MY+ CG D +RF+FD + + W A+IS Y++ DE L F M + + +P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 417
D T +I C + +G GL ++V V NAL+ Y G + DA +LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 418 YALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD----LRPNRVTFLAVLQACTHA 473
+PE+ +VSW +MI + NG E+ L +MME + P+ T + VL C
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 474 GFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 533
+ G G K+ +++ EL + + D+ + G + A + M + W T
Sbjct: 306 REIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNT 363
Query: 534 LL 535
++
Sbjct: 364 MV 365
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS------MISGCGQSGALELGKWFDNY 384
IS + + GDLD++ R E +L ++ G+ +E+G+
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 385 AC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVE 443
S L+++ ++C +I MY+ CGS D+R +F AL K + W +I+ + N + E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 444 ALDLFHQMME-LDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
L+ F +M+ DL P+ T+ V++AC + G L+ K V ++ + +
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNAL 228
Query: 503 ADLLGRKGKLKEALDFVQSMPIKS 526
G G + +AL MP ++
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERN 252
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/599 (33%), Positives = 313/599 (52%), Gaps = 4/599 (0%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMI 76
I W S I+ V N + +AL+LF M+ D + P+ + KAC + S+ Y + +
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
H + VK+ S ++V ++++DMY + ++D + ++F +MP R+ +W A+I G G
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
++ L F M +D T +A + + K++H+ I G + V N+
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y +C +++ +F + E R VVSW S+I + ++ + M P
Sbjct: 251 ATMYTECGEMQDGLCLFENMSE--RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T S+ S+C LV G +H + + G + +SV N+++ MYS CG++ SA LF
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
GM R +SW+ +I GY Q G +E + F M +G P + S++S G +E
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ A GL+ N V ++LI+MYSKCGSI +A +F +VS T MI G A
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G+ EA+DLF + +++ RP+ VTF++VL ACTH+G L+ G+ YFN+M + Y + P
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAK 548
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM DLL R G+L +A + M K D +W TLL ACK +IE G A R+ E
Sbjct: 549 EHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 608
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+P A V +ANIY+ G + AN+R MK V K PG S + I F D
Sbjct: 609 LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGD 667
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 5/413 (1%)
Query: 105 LDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV--GIQADFVTVMGLT 162
L A ++FDKMP D+ SW ++I + ++ L LF MR+V + D + +
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
+A + +++ +S+H++ + + + V V ++ + Y + + + VF E R
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFS--EMPFRN 173
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHS 282
V+W +II G + ++ + L ++ M D T L +C + G+ +H+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 283 HGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDE 342
H I GF + V N+L +MY++CG++ LF+ M +R VSWT++I Y + G +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 343 ALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
A+ F M + P+ T SM S C L G+ S GL D++ V N+++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
MYS CG++ A LF + + ++SW+T+I G G E F M + +P
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEA 515
++L + +E G + + + + S + ++ + G +KEA
Sbjct: 414 LASLLSVSGNMAVIEGG-RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 144/315 (45%), Gaps = 30/315 (9%)
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TT +SLL V E +V+ S+ + FD + S + +LI+ G++ +AR +FD
Sbjct: 16 TTSISLLQKPV-EENIVR----ISNQVMVKFDPN-SHLRSLIN----AGNLRAARQVFDK 65
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV--PDLVTVLSMISGCGQSGALE 376
M VSWT++I Y + DEAL LF AM PD + ++ CGQS +
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ YA L +V V ++L+DMY + G I + +F +P + V+WT +I G
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY-FNLMTKVYQVNPE 495
G + E L F +M + + TF L+AC AG + +G + V
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC--AGLRQVKYGKAIHTHVIVRGFVTT 243
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLF 555
L + +A + G++++ L ++M + D W +L+ VAY+
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLI--------------VAYKRI 288
Query: 556 ELEPHSAAPYVEMAN 570
E + +++M N
Sbjct: 289 GQEVKAVETFIKMRN 303
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 311/584 (53%), Gaps = 7/584 (1%)
Query: 37 KALLLFRRMKKND--IEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTT 94
+A LFR+M ++ P+++TF + C +H VK F ++ F+ +
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS 187
Query: 95 MVDMYAKCD--RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
V + + C+ RLD A LF+++P++D ++N +I G+ + G + + LF MR G Q
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
T G+ +A + +L + +H+ + G D SV N + Y+K + + ++
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + E VS+N +I + D+++ SL+F+R M GF ++LS
Sbjct: 308 FDEMPE--LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS 365
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
+L GR +H + D + V N+L+ MY+KC + A +F + RT VSWTA+IS
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
GY QKG L+LF M + D T +++ +L LGK + G +
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
NV + L+DMY+KCGSI DA ++F +P++ VSW +I+ A NG+ A+ F +M+
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
E L+P+ V+ L VL AC+H GF+E+G YF M+ +Y + P+ HY+CM DLLGR G+
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 513 KEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP-HSAAPYVEMANI 571
EA + MP + D +W ++L AC+IH+N + E A +LF +E AA YV M+NI
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNI 665
Query: 572 YALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
YA G W+ V +++ M+ +KK P S V +N K F+ D
Sbjct: 666 YAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 709
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 216/471 (45%), Gaps = 17/471 (3%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+Y +M H + V + TM+ + K + A LFD MPDR V +W ++ +
Sbjct: 70 VYDEMPHKNTVST---------NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWY 120
Query: 131 AQMGFLEKVLCLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
A+ ++ LF M D VT L A + + VH+F + +G D
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 189 D--VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
+ ++V N + +Y + L +A ++F I E + V++N++I G + +S++ +
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLF 238
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
M G +P T +L + V G+ +H+ + GF D SV N ++ YSK
Sbjct: 239 LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMI 366
+ R LFD M + VS+ +IS Y+Q + +L F M+ G +M+
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
S +L++G+ A + V N+L+DMY+KC +A +F +LP++T V
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLM 486
SWT +I+G G L LF +M +LR ++ TF VL+A L G +
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI 478
Query: 487 TKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 537
+ + + S + D+ + G +K+A+ + MP + +A W L+ A
Sbjct: 479 IRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 271 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAM 330
P + R V + I GFD D N ++ + G + +AR ++D M + VS M
Sbjct: 26 PATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTM 85
Query: 331 ISGYAQKGDL-------------------------------DEALRLFFAM--EAAGEVP 357
ISG+ + GD+ DEA +LF M ++ +P
Sbjct: 86 ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 358 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGDARE 415
D VT +++ GC + +A G N + V N L+ Y + + A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 416 LFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
LF +PEK V++ T+I G +G + E++ LF +M + +P+ TF VL+A
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 313/598 (52%), Gaps = 8/598 (1%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIE--PNNLTFPFIAKACAKLSDFLYSQ 74
S++ +N IR V + H A+ +F RM ++ P+ T+PF+AKA +L
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
++HG I++S F D +VQ ++ MY +++ A +FD M +RDV SWN MI G+ + G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
++ L +F M + D T++ + H K L + ++VH + + V N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
++ Y KC + A VF +E R V++W +I G T +++L R M ++G
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMER--RDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
RP+ T+ SL+S C + G+ +H + D+ + +LISMY+KC +D
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F G W+A+I+G Q + +AL LF M P++ T+ S++
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 375 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK----TVVSWTT 430
L Y G ++ L+ +YSKCG++ A ++F + EK VV W
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I+G ++G+ AL +F +M+ + PN +TF + L AC+H+G +E+G F M + Y
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ NHY+C+ DLLGR G+L EA + + ++P + + +WG LL AC H N+++GE
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 551 AYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKT 608
A +LFELEP + YV +ANIYA GRW + +R+MM+ ++K PG S + I +
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNS 673
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 224/474 (47%), Gaps = 9/474 (1%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H H++ S + T V YA C + A KLF++MP + S+N +I + +
Sbjct: 34 TKALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVR 92
Query: 133 MGFLEKVLCLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
G + +F M G++ D T + +AA K + L VH + D
Sbjct: 93 EGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK 152
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N ++ Y ++MA VF ++ R V+SWN++I G +D+L + M+
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKN--RDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
+ D T+VS+L C + L GR VH + V N L++MY KCG +D
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
ARF+FD M R ++WT MI+GY + GD++ AL L M+ G P+ VT+ S++S CG
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+ + GK +A + ++++ +LI MY+KC + +F + W+
Sbjct: 331 DALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSA 390
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+IAGC N +AL LF +M D+ PN T ++L A L + +TK
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTG 450
Query: 491 QVNPELNHYSCMADLLGRKGKLKEA---LDFVQSMPIKSDAGIWGTLLCACKIH 541
++ L+ + + + + G L+ A + +Q D +WG L+ +H
Sbjct: 451 FMSS-LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 207/433 (47%), Gaps = 16/433 (3%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
+ ++ + WN+ I + AL++F M ++ ++ T + C L D
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+ +H + + I V+ +V+MY KC R+D A +FD+M RDV +W MI G+ +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
G +E L L M+ G++ + VT+ L A ++ K +H + + V +D+ +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ IS YAKC + + VF G + W++II GC + D+L ++ M +
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASK--YHTGPWSAIIAGCVQNELVSDALGLFKRMRRE 414
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 312
P++ T+ SLL + L Q +H + GF + L+ +YSKCG ++SA
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 313 RFLFDGMCDRTR----VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+F+G+ ++ + V W A+ISGY GD AL++F M +G P+ +T S ++
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 369 CGQSGALELGK-----WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-E 422
C SG +E G ++Y + N C ++D+ + G + +A L +P E
Sbjct: 535 CSHSGLVEEGLTLFRFMLEHYKTLA--RSNHYTC--IVDLLGRAGRLDEAYNLITTIPFE 590
Query: 423 KTVVSWTTMIAGC 435
T W ++A C
Sbjct: 591 PTSTVWGALLAAC 603
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 5/275 (1%)
Query: 263 SLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDR 322
SLL+ +++ + + +H H I G + +++TL Y+ CG I AR LF+ M
Sbjct: 20 SLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQS 78
Query: 323 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--VPDLVTVLSMISGCGQSGALELGKW 380
+ +S+ +I Y ++G +A+ +F M + G VPD T + G+ +++LG
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ V NAL+ MY G + AR++F + + V+SW TMI+G NG
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+AL +F M+ + + T +++L C H LE G L+ + ++ ++ +
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE-KRLGDKIEVKN 257
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ ++ + G++ EA FV + D W ++
Sbjct: 258 ALVNMYLKCGRMDEA-RFVFDRMERRDVITWTCMI 291
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 306/581 (52%), Gaps = 6/581 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W +R E+ + + L+ + K+ +++ F KAC +L D + IH +V
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K P + ++ V T ++DMYAKC + A+K+F+ + R+V W +MI G+ + E+ L
Sbjct: 170 KVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF MR + + T L A L K H + G++ + + + Y
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+ A VF E +V W ++I G T+ +++L+ ++ M +P+ T+
Sbjct: 289 KCGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
S+LS C E L GR VH I G D +V N L+ MY+KC A+++F+ +
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
+ V+W ++ISG++Q G + EAL LF M + P+ VTV S+ S C G+L +G
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 382 DNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNG 439
Y+ G +V V AL+D Y+KCG AR +F + EK ++W+ MI G G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525
Query: 440 EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY 499
+ + +L+LF +M++ +PN TF ++L AC H G + +G YF+ M K Y P HY
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY 585
Query: 500 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEP 559
+CM D+L R G+L++ALD ++ MPI+ D +G L C +H ++GE V ++ +L P
Sbjct: 586 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHP 645
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQS 600
A+ YV ++N+YA GRW+ +R +MK+ + K G S
Sbjct: 646 DDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 197/403 (48%), Gaps = 4/403 (0%)
Query: 77 HGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFL 136
HG + + DI + T +V +Y A +FD++P+ D W M+ +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
+V+ L+ + G + D + +A + L K +H + + D V
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGL 182
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ YAKC ++K A VF I LR VV W S+I G D ++ L + M +
Sbjct: 183 LDMYAKCGEIKSAHKVFNDIT--LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG 240
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
+ T +L+ +C AL QG+ H + G +L ++ +L+ MY KCGDI +AR +F
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ V WTAMI GY G ++EAL LF M+ P+ VT+ S++SGCG LE
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLE 360
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG+ + G+ D V NAL+ MY+KC DA+ +F EK +V+W ++I+G +
Sbjct: 361 LGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 419
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
NG EAL LFH+M + PN VT ++ AC G L G
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 146/316 (46%), Gaps = 3/316 (0%)
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
L+ H G+ D+S+ +S Y K A LVF I E W ++
Sbjct: 60 LRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE--PDFYLWKVMLRCY 117
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+ + + Y ++ GFR D L +C + L G+ +H + D
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDN 176
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V+ L+ MY+KCG+I SA +F+ + R V WT+MI+GY + +E L LF M
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
+ + T ++I C + AL GKWF G++ + + +L+DMY KCG I +A
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
Query: 414 RELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHA 473
R +F +V WT MI G NG EAL LF +M ++++PN VT +VL C
Sbjct: 297 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 474 GFLEKGWGYFNLMTKV 489
LE G L KV
Sbjct: 357 ENLELGRSVHGLSIKV 372
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 135/322 (41%), Gaps = 41/322 (12%)
Query: 264 LLSSCVCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARFLFDGMCD 321
LLS C ++L Q SHG+ G L D+S+ L+S+Y G AR +FD + +
Sbjct: 50 LLSKCTNIDSLRQ-----SHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE 104
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF 381
W M+ Y + E ++L+ + G D + + C + L+ GK
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 382 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEF 441
DNV V L+DMY+KCG I A ++F + + VV WT+MIAG N
Sbjct: 165 HCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 442 VEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------------- 488
E L LF++M E ++ N T+ ++ ACT L +G + + K
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 489 ------------VYQVNPELNH-----YSCMADLLGRKGKLKEALDFVQSMP---IKSDA 528
+V E +H ++ M G + EAL Q M IK +
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 529 GIWGTLLCACKIHRNIEIGEYV 550
++L C + N+E+G V
Sbjct: 344 VTIASVLSGCGLIENLELGRSV 365
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 323/599 (53%), Gaps = 14/599 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN I+ +A+ + RM ++ + T+PF+ K+ A +S + IH ++
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAY---KLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
K F SD++V +++ +Y K L CA+ K+F++MP+RD+ SWN+MI G+ +G
Sbjct: 158 KLGFVSDVYVCNSLISLYMK---LGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFS 214
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWI 197
L LF M G + D + M A H + K +H + ++ DV V + +
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSIL 274
Query: 198 SAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS-LNFYRHMIYDGFRP 256
Y+K ++ AE +F G+ + R +V+WN +IG + D+ L F + +G +P
Sbjct: 275 DMYSKYGEVSYAERIFNGMIQ--RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
DV T ++LL + A+++GR +H + + GF + + LI MY +CG + SA +F
Sbjct: 333 DVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIF 388
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M ++ +SW ++I+ Y Q G AL LF + + VPD T+ S++ +S +L
Sbjct: 389 DRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLS 448
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G+ Y N ++ N+L+ MY+ CG + DAR+ F + K VVSW ++I A
Sbjct: 449 EGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYA 508
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
++G ++ LF +M+ + PN+ TF ++L AC+ +G +++GW YF M + Y ++P +
Sbjct: 509 VHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 568
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM DL+GR G A F++ MP A IWG+LL A + H++I I E+ A ++F+
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFK 628
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+E + YV + N+YA GRW+ V ++ +M+ + + +S V GK+ FT D
Sbjct: 629 MEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGD 687
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 200/384 (52%), Gaps = 10/384 (2%)
Query: 99 YAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTV 158
+A ++ A +LFD+M D WN MI GF G + + + M G++AD T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ ++ L K +H+ I +G +DV VCN+ IS Y K AE VF + E
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 219 GLRTVVSWNSIIGG-CTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
R +VSWNS+I G GD F SL ++ M+ GF+PD + +S L +C + G
Sbjct: 194 --RDIVSWNSMISGYLALGDGF-SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 278 RLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
+ +H H + + DV V+ +++ MYSK G++ A +F+GM R V+W MI YA+
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 337 KGDLDEALRLFFAM-EAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
G + +A F M E G PD++T ++++ S LE G+ YA G +++
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILE-GRTIHGYAMRRGFLPHMV 366
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ ALIDMY +CG + A +F + EK V+SW ++IA NG+ AL+LF ++ +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG 479
L P+ T ++L A + L +G
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEG 450
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 202/406 (49%), Gaps = 9/406 (2%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WNS I + + +L+LF+ M K +P+ + AC+ + + IH
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 79 HIVKSPFWS-DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLE 137
H V+S + D+ V T+++DMY+K + A ++F+ M R++ +WN MI +A+ G +
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 138 KVLCLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
F M G+Q D +T + L A+ + +++H + + G + +
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLETAL 371
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
I Y +C LK AE++F + E + V+SWNSII K +L ++ + P
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAE--KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D TT+ S+L + +L +GR +H++ + + + ++N+L+ MY+ CGD++ AR F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
+ + + VSW ++I YA G ++ LF M A+ P+ T S+++ C SG ++
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 377 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
G ++F++ G+ + ++D+ + G+ A+ +P
Sbjct: 550 EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 314/579 (54%), Gaps = 41/579 (7%)
Query: 74 QMIHGHIVKSPFWSDIFVQTTMVDMYAKCD--RLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ HGH++++ +SD + + + M A L+ A K+FD++P + +WN +I +A
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 132 QMGFLEKVLCLFYNMRLVGIQADF---VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ VL ++ + +V + T L +AA LSL +S+H + V +
Sbjct: 107 SGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV V N+ I Y C DL A VF I+E + VVSWNS+I G D +L ++
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKE--KDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
M + + T+V +LS+C L GR V S+ ++++++ N ++ MY+KCG
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYA-------------------------------QK 337
I+ A+ LFD M ++ V+WT M+ GYA Q
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 338 GDLDEALRLFFAMEAAGEVP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
G +EAL +F ++ + + +T++S +S C Q GALELG+W +Y G++ N V
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHV 402
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
+ALI MYSKCG + +RE+F ++ ++ V W+ MI G A++G EA+D+F++M E ++
Sbjct: 403 TSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANV 462
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
+PN VTF V AC+H G +++ F+ M Y + PE HY+C+ D+LGR G L++A+
Sbjct: 463 KPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV 522
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
F+++MPI +WG LL ACKIH N+ + E RL ELEP + +V ++NIYA G
Sbjct: 523 KFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLG 582
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+W+ V+ LR M+ +KK PG S + I+G F D
Sbjct: 583 KWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD 621
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 225/469 (47%), Gaps = 33/469 (7%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRM-KKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN+ IR + ++ F M ++ PN TFPF+ KA A++S Q +HG
Sbjct: 98 WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
VKS SD+FV +++ Y C LD A K+F + ++DV SWN+MI GF Q G +K L
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF M ++A VT++G+ A ++L + V S+ V+ ++++ N + Y
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 201 AKCNDLKMAELVFRGIEEG-----------------------------LRTVVSWNSIIG 231
KC ++ A+ +F +EE + +V+WN++I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 232 GCTYGDKFDDSL-NFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
K +++L F+ + + + T+VS LS+C AL GR +HS+ +G
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
++ V + LI MYSKCGD++ +R +F+ + R W+AMI G A G +EA+ +F+ M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 351 EAAGEVPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 409
+ A P+ VT ++ C +G + E F + G+ ++D+ + G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 410 IGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMMELDLR 457
+ A + A+P S W ++ C ++ A +++EL+ R
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 566
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 193/406 (47%), Gaps = 39/406 (9%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTW--ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNS 228
L LK H I G +D + ++A + L+ A VF I + +WN+
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP--NSFAWNT 100
Query: 229 IIGGCTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
+I G S+ + M+ + P+ T L+ + +L G+ +H +
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
DV V N+LI Y CGD+DSA +F + ++ VSW +MI+G+ QKG D+AL LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 348 FAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 407
ME+ VT++ ++S C + LE G+ +Y + N+ + NA++DMY+KC
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 408 GSIGDARELFYALPEKTVVSWTTMIAGCAL------------------------------ 437
GSI DA+ LF A+ EK V+WTTM+ G A+
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 438 -NGEFVEALDLFHQM-MELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPE 495
NG+ EAL +FH++ ++ +++ N++T ++ L AC G LE G + + K + +
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMN 399
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ S + + + G L+++ + S+ K D +W ++ +H
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 162/363 (44%), Gaps = 36/363 (9%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + WNS I V K KAL LF++M+ D++ +++T + ACAK+ + + +
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFD--------------------- 113
+ +I ++ ++ + M+DMY KC ++ A +LFD
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 114 ----------KMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFVTVMGLT 162
MP +D+ +WNA+I + Q G + L +F+ ++L ++ + +T++
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 163 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRT 222
A L L + +HS+ G+ + V + I Y+KC DL+ + VF +E+ R
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK--RD 430
Query: 223 VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR-LVH 281
V W+++IGG +++++ + M +P+ T ++ +C + + L H
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WTAMISGYAQKGDL 340
+YG + ++ + + G ++ A + M S W A++ +L
Sbjct: 491 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550
Query: 341 DEA 343
+ A
Sbjct: 551 NLA 553
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 8/292 (2%)
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARFLFDGM 319
+SL+ CV +L Q + H H I G D + L +M S ++ AR +FD +
Sbjct: 34 ISLIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEV-PDLVTVLSMISGCGQSGALELG 378
+W +I YA D ++ F M + + P+ T +I + +L LG
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ A + +V V N+LI Y CG + A ++F + EK VVSW +MI G
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +AL+LF +M D++ + VT + VL AC LE G + + + +VN L
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE-NRVNVNLTL 269
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYV 550
+ M D+ + G +++A +M K D W T+L I + E V
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREV 320
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 324/591 (54%), Gaps = 6/591 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W++ + ++ E KAL +F+ M + +EP+ +T + + CA+L ++ +HG I
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ F D + +++ MY+KC L + ++F+K+ ++ SW AMI + + F EK L
Sbjct: 230 RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 289
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV-SVCNTWISAY 200
F M GI+ + VT+ + + + KSVH F + +D + S+ + Y
Sbjct: 290 SFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A+C L E V R + + R +V+WNS+I + +L +R M+ +PD T
Sbjct: 350 AECGKLSDCETVLRVVSD--RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ S +S+C + G+ +H H I D V N+LI MYSK G +DSA +F+ +
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
R+ V+W +M+ G++Q G+ EA+ LF M + + VT L++I C G+LE GKW
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ GLKD + ALIDMY+KCG + A +F A+ +++VSW++MI ++G
Sbjct: 527 VHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGR 585
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
A+ F+QM+E +PN V F+ VL AC H+G +E+G YFNLM K + V+P H++
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFA 644
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C DLL R G LKEA ++ MP +DA +WG+L+ C+IH+ ++I + + L ++
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTD 704
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
Y ++NIYA G W+ LR+ MK + +KK PG S + I+ K F
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRF 755
Score = 249 bits (636), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 253/488 (51%), Gaps = 9/488 (1%)
Query: 38 ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSPFWSDIFVQTTMV 96
A+ L+ R+ + + FP + +ACA + L +HG I+K D ++T+++
Sbjct: 84 AIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLL 143
Query: 97 DMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFV 156
MY + L A K+FD MP RD+ +W+ ++ + G + K L +F M G++ D V
Sbjct: 144 CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAV 203
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T++ + + L + +SVH D D ++CN+ ++ Y+KC DL +E +F I
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI 263
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
+ + VSW ++I G+ + +L + MI G P++ T+ S+LSSC + +
Sbjct: 264 AK--KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIRE 321
Query: 277 GRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G+ VH + D + ++ L+ +Y++CG + + + DR V+W ++IS YA
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
+G + +AL LF M PD T+ S IS C +G + LGK + + D
Sbjct: 382 HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-F 440
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
V N+LIDMYSK GS+ A +F + ++VV+W +M+ G + NG VEA+ LF M
Sbjct: 441 VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY 500
Query: 456 LRPNRVTFLAVLQACTHAGFLEKG-WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKE 514
L N VTFLAV+QAC+ G LEKG W + L+ + +L + + D+ + G L
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK---DLFTDTALIDMYAKCGDLNA 557
Query: 515 ALDFVQSM 522
A ++M
Sbjct: 558 AETVFRAM 565
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 251/517 (48%), Gaps = 18/517 (3%)
Query: 62 KACAKLSDFLYSQMIHGHI-VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDV 120
++C+ L L SQ+ H H+ V D T +++ YA D + +F+ P D
Sbjct: 9 RSCSSLR--LVSQL-HAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDS 65
Query: 121 ASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHS 179
+ +I L+ + L++ + Q + FV L A +HLS+ VH
Sbjct: 66 FMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHG 125
Query: 180 FGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
I GVD D + + + Y + +L AE VF G+ +R +V+W++++ C +
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP--VRDLVAWSTLVSSCLENGEV 183
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+L ++ M+ DG PD T++S++ C L R VH FDLD ++ N+L
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
++MYSKCGD+ S+ +F+ + + VSWTAMIS Y + ++ALR F M +G P+L
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN-ALIDMYSKCGSIGDARELFY 418
VT+ S++S CG G + GK +A L N + AL+++Y++CG + D +
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 419 ALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEK 478
+ ++ +V+W ++I+ A G ++AL LF QM+ ++P+ T + + AC +AG +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 479 GWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
G + + V+ E S + D+ + G + A + +S W ++LC
Sbjct: 424 GKQIHGHVIRT-DVSDEFVQNS-LIDMYSKSGSVDSASTVFNQIKHRS-VVTWNSMLCGF 480
Query: 539 KIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALG 575
+ N A LF+ HS Y+EM + L
Sbjct: 481 SQNGN----SVEAISLFDYMYHS---YLEMNEVTFLA 510
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 7/337 (2%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
++ I WNS I + +AL LFR+M I+P+ T AC
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IHGH++++ SD FVQ +++DMY+K +D A +F+++ R V +WN+M+ GF+
Sbjct: 423 LGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 191
Q G + + LF M ++ + VT + + QA L K VH I G+ D+
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLF 540
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
I YAKC DL AE VFR + R++VSW+S+I + +++ + M+
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMS--SRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 311
G +P+ +++LS+C ++ +G+ + +G + I + S+ GD+
Sbjct: 599 SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 658
Query: 312 ARFLFDGMCDRTRVS-WTAMISG--YAQKGDLDEALR 345
A M S W ++++G QK D+ +A++
Sbjct: 659 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK 695
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 197/597 (32%), Positives = 313/597 (52%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ IR E+HK + LF MK + ++ TF + CA D H I+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K ++FV +VDMYAKC L+ A ++F++M DRD +WN +I + Q +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF M L GI +D + +A H L K VH + G+D D+ ++ I Y+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC +K A VF + E +VVS N++I G + + ++++ ++ M+ G P T
Sbjct: 576 KCGIIKDARKVFSSLPEW--SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITF 632
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARFLFDGMC 320
+++ +C PE+L G H GF + + +L+ MY + A LF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 321 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
++ V WT M+SG++Q G +EAL+ + M G +PD T ++++ C +L G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
+ + + N LIDMY+KCG + + ++F + ++ VVSW ++I G A N
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G +AL +F M + + P+ +TFL VL AC+HAG + G F +M Y + ++H
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
+CM DLLGR G L+EA DF+++ +K DA +W +LL AC+IH + GE A +L ELE
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELE 932
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P +++ YV ++NIYA G W+ LR +M+ VKK PG S + + +T F D
Sbjct: 933 PQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGD 989
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 244/505 (48%), Gaps = 38/505 (7%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
+ WNS + + K L F + +N I PN TF + CA+ ++ + + IH
Sbjct: 125 VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHC 184
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
++K + + +VDMYAKCDR+ A ++F+ + D + W + G+ + G E+
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ +F MR G + D HL+ V+V NT+I
Sbjct: 245 AVLVFERMRDEGHRPD---------------HLAF----------------VTVINTYI- 272
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
+ LK A L+F E VV+WN +I G ++ ++ +M +
Sbjct: 273 ---RLGKLKDARLLFG--EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+T+ S+LS+ L G +VH+ I G ++ V ++L+SMYSKC +++A +F+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ ++ V W AMI GYA G+ + + LF M+++G D T S++S C S LE+G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
F + L N+ V NAL+DMY+KCG++ DAR++F + ++ V+W T+I +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
EA DLF +M + + + L+ACTH L +G L K ++ +L+
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC-GLDRDLHT 566
Query: 499 YSCMADLLGRKGKLKEALDFVQSMP 523
S + D+ + G +K+A S+P
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 216/453 (47%), Gaps = 38/453 (8%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A+L+F RM+ P++L F T+
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAF-----------------------------------VTV 267
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
++ Y + +L A LF +M DV +WN MI G + G + F+NMR +++
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 156 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRG 215
T+ + A +L L VH+ I +G+ +++ V ++ +S Y+KC ++ A VF
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 216 IEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALV 275
+EE + V WN++I G + + + + M G+ D T SLLS+C L
Sbjct: 388 LEE--KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 276 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYA 335
G HS I ++ V N L+ MY+KCG ++ AR +F+ MCDR V+W +I Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 336 QKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 395
Q + EA LF M G V D + S + C L GK + GL ++
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 396 VCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
++LIDMYSKCG I DAR++F +LPE +VVS +IAG + N EA+ LF +M+
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRG 624
Query: 456 LRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK 488
+ P+ +TF +++AC L G + +TK
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 183/431 (42%), Gaps = 71/431 (16%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L + K+VHS + +G+D++ + N + YAKC + AE F +E + V +WNS++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE---KDVTAWNSML 132
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD 290
+ K L + + + P+ T +LS+C + GR +H I G +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 291 LDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM 350
+ L+ MY+KC I AR +F+ + D V WT + SGY + G +EA+ +F M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 351 EAAGEVPD---LVTVLS----------------------------MISGCGQSGA----- 374
G PD VTV++ MISG G+ G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 375 ------------------------------LELGKWFDNYACSGGLKDNVMVCNALIDMY 404
L+LG A GL N+ V ++L+ MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
SKC + A ++F AL EK V W MI G A NGE + ++LF M + TF
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
++L C + LE G + +++ K ++ L + + D+ + G L++A + M
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIK-KKLAKNLFVGNALVDMYAKCGALEDARQIFERM-C 490
Query: 525 KSDAGIWGTLL 535
D W T++
Sbjct: 491 DRDNVTWNTII 501
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 9/278 (3%)
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ VHS + G D + + N ++ +Y+KC + A FD + ++ +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 392
Y+ G + LR F ++ P+ T ++S C + +E G+ GL+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMM 452
N AL+DMY+KC I DAR +F + + V WT + +G G EA+ +F +M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 453 ELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKL 512
+ RP+ + F+ V+ G L+ F M+ +P++ ++ M G++G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCE 308
Query: 513 KEALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIG 547
A+++ +M +KS G++L A I N+++G
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACA---K 66
+++ R S + WNS I A AL +F M+++ I P+ +TF + AC+ K
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849
Query: 67 LSD 69
+SD
Sbjct: 850 VSD 852
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 345 bits (885), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 199/614 (32%), Positives = 320/614 (52%), Gaps = 19/614 (3%)
Query: 8 PRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL 67
P N + +S I ++ + +A+ L+ +M + D+ P+ F I KACA
Sbjct: 129 PERNLVSYTSVITGYS-------QNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASS 181
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
SD + +H ++K S + Q ++ MY + +++ A ++F +P +D+ SW+++I
Sbjct: 182 SDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSII 241
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK-----SVHSFGI 182
GF+Q+GF + L M G+ + G + A SLL+ +H I
Sbjct: 242 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS----SLLRPDYGSQIHGLCI 297
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
+ + + YA+C L A VF IE SWN II G D++
Sbjct: 298 KSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP--DTASWNVIIAGLANNGYADEA 355
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
++ + M GF PD ++ SLL + P AL QG +HS+ I +GF D++V N+L++M
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 303 YSKCGDIDSARFLFDGMCDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVT 361
Y+ C D+ LF+ + VSW +++ Q E LRLF M + PD +T
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 362 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 421
+ +++ GC + +L+LG Y+ GL + N LIDMY+KCGS+G AR +F ++
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
+ VVSW+T+I G A +G EAL LF +M + PN VTF+ VL AC+H G +E+G
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
+ M + ++P H SC+ DLL R G+L EA F+ M ++ D +W TLL ACK
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 655
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
N+ + + A + +++P ++ +V + +++A G W+ A LR+ MK++ VKK PGQS
Sbjct: 656 GNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSW 715
Query: 602 VHINGKTCTFTVED 615
+ I K F ED
Sbjct: 716 IEIEDKIHIFFAED 729
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 240/519 (46%), Gaps = 13/519 (2%)
Query: 23 NSQIREAVDKNEAHKALLLFRRMKKNDIEPNNL-TFPFIAKACAKLSDFLYSQMIHGHIV 81
N I N +AL F +KN L T+ + AC+ + IH HI+
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
S D + ++ MY KC L A ++FD MP+R++ S+ ++I G++Q G + +
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
L+ M + D + +A + + L K +H+ I + + + N I+ Y
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT-YGDKFDDSLNFYRHMIYDG-FRPDVT 259
+ N + A VF GI ++ ++SW+SII G + G +F ++L+ + M+ G F P+
Sbjct: 215 RFNQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEF-EALSHLKEMLSFGVFHPNEY 271
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
S L +C G +H I + +L MY++CG ++SAR +FD +
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK 379
SW +I+G A G DEA+ +F M ++G +PD +++ S++ + AL G
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 380 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT-VVSWTTMIAGCALN 438
+Y G ++ VCN+L+ MY+ C + LF VSW T++ C +
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGY--FNLMTKVYQVNPEL 496
+ VE L LF M+ + P+ +T +L+ C L+ G ++L T + PE
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA---PEQ 508
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
+ + D+ + G L +A SM + D W TL+
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 317/595 (53%), Gaps = 6/595 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMK-KNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + + +A+ L+ RM ++P+ TFP + + C + D + +H H+
Sbjct: 163 WNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV 222
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
V+ + DI V ++ MY KC + A LFD+MP RD+ SWNAMI G+ + G + L
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL 282
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
LF+ MR + + D +T+ + A L + +H++ I G D+SVCN+ Y
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+ AE +F +E + +VSW ++I G Y D +++ YR M D +PD T
Sbjct: 343 LNAGSWREAEKLFSRMER--KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V ++LS+C L G +H I V V N LI+MYSKC ID A +F +
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ +SWT++I+G EAL M+ + P+ +T+ + ++ C + GAL GK
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ-PNAITLTAALAACARIGALMCGKE 519
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
+ G+ + + NAL+DMY +CG + A F + +K V SW ++ G + G+
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQ 578
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
++LF +M++ +RP+ +TF+++L C+ + + +G YF+ M Y V P L HY+
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYA 637
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLLGR G+L+EA F+Q MP+ D +WG LL AC+IH I++GE A +FEL+
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
S Y+ + N+YA G+W VA +R MMK N + G S V + GK F +D
Sbjct: 698 SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD 752
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 220/429 (51%), Gaps = 35/429 (8%)
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLS-----LLKSVHSF 180
G G LE+ + L +M+ + + D FV ++ L + + S L S+ S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
G+ +G N +++ + + +L A VF + E R + SWN ++GG FD
Sbjct: 128 GVELG--------NAFLAMFVRFGNLVDAWYVFGKMSE--RNLFSWNVLVGGYAKQGYFD 177
Query: 241 DSLNFYRHMIY-DGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
+++ Y M++ G +PDV T +L +C L +G+ VH H + YG++LD+ V+N L
Sbjct: 178 EAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL 237
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
I+MY KCGD+ SAR LFD M R +SW AMISGY + G E L LFFAM PDL
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+T+ S+IS C G LG+ Y + G ++ VCN+L MY GS +A +LF
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ K +VSWTTMI+G N +A+D + M + ++P+ +T AVL AC G L+ G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 480 WGYFNLMTK------VYQVNPELNHYSCMADLLGRKGK-LKEALDFVQSMPIKSDAGIWG 532
L K V N +N YS K K + +ALD ++P K+ W
Sbjct: 418 VELHKLAIKARLISYVIVANNLINMYS--------KCKCIDKALDIFHNIPRKNVIS-WT 468
Query: 533 TLLCACKIH 541
+++ +++
Sbjct: 469 SIIAGLRLN 477
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 224/441 (50%), Gaps = 11/441 (2%)
Query: 98 MYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV-GIQADFV 156
M+ + L A+ +F KM +R++ SWN ++ G+A+ G+ ++ +CL++ M V G++ D
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 157 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGI 216
T + + L+ K VH + G + D+ V N I+ Y KC D+K A L+F +
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 217 EEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQ 276
R ++SWN++I G + L + M PD+ T+ S++S+C
Sbjct: 258 PR--RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 277 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQ 336
GR +H++ I GF +D+SV N+L MY G A LF M + VSWT MISGY
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 337 KGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
D+A+ + M+ PD +TV +++S C G L+ G A L V+V
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
N LI+MYSKC I A ++F+ +P K V+SWT++IAG LN EAL +F + M++ L
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTL 494
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHY--SCMADLLGRKGKLKE 514
+PN +T A L AC G L G + V + L+ + + + D+ R G++
Sbjct: 495 QPNAITLTAALAACARIGALMCG---KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 515 ALDFVQSMPIKSDAGIWGTLL 535
A S K D W LL
Sbjct: 552 AWSQFNSQ--KKDVTSWNILL 570
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 197/421 (46%), Gaps = 5/421 (1%)
Query: 19 INQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHG 78
I WN+ I + H+ L LF M+ ++P+ +T + AC L D + IH
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
+++ + F DI V ++ MY A KLF +M +D+ SW MI G+ +K
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+ + M ++ D +TV + A L +H I + + V V N I+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+KC + A +F I + V+SW SII G ++ ++L F R M +P+
Sbjct: 442 MYSKCKCIDKALDIFHNIPR--KNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNA 498
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T+ + L++C AL+ G+ +H+H + G LD + N L+ MY +CG +++A F+
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 558
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ SW +++GY+++G + LF M + PD +T +S++ GC +S + G
Sbjct: 559 Q-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
+ + G+ N+ ++D+ + G + +A + +P W ++ C +
Sbjct: 618 LMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 438 N 438
+
Sbjct: 678 H 678
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/554 (35%), Positives = 304/554 (54%), Gaps = 12/554 (2%)
Query: 71 LYSQMIHGHIVKSPFWS----DIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAM 126
LYS+ ++ F+S ++F +V YAK ++ A +LFD++P D S+N +
Sbjct: 52 LYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTL 111
Query: 127 IVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 186
I G+A + LF MR +G + D T+ GL A + L+K +H F + G
Sbjct: 112 ISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGF 169
Query: 187 DADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFY 246
D+ SV N +++ Y+K L+ A VF G++E LR VSWNS+I + +L Y
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE-LRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 247 RHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 306
+ MI+ GF+ D+ T+ S+L++ + L+ GR H I GF + V + LI YSKC
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKC 288
Query: 307 GDIDS---ARFLFDGMCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEVPDLVTV 362
G D + +F + V W MISGY+ +L +EA++ F M+ G PD +
Sbjct: 289 GGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF 348
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALP 421
+ + S C + K A + N + V NALI +Y K G++ DAR +F +P
Sbjct: 349 VCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Query: 422 EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG 481
E VS+ MI G A +G EAL L+ +M++ + PN++TF+AVL AC H G +++G
Sbjct: 409 ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE 468
Query: 482 YFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
YFN M + +++ PE HYSCM DLLGR GKL+EA F+ +MP K + W LL AC+ H
Sbjct: 469 YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Query: 542 RNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSL 601
+N+ + E A L ++P +A PYV +AN+YA +W+ +A++R M+ +++K PG S
Sbjct: 529 KNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSW 588
Query: 602 VHINGKTCTFTVED 615
+ + K F ED
Sbjct: 589 IEVKKKKHVFVAED 602
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 208/434 (47%), Gaps = 13/434 (2%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
++I + T++ +N+ I D E A++LF+RM+K E + T + AC D
Sbjct: 97 FDEIPQPDTVS-YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVD 155
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPD-RDVASWNAMIV 128
+ + +H V F S V V Y+K L A +F M + RD SWN+MIV
Sbjct: 156 LI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 129 GFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 188
+ Q K L L+ M G + D T+ + A HL + H I G
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 189 DVSVCNTWISAYAK---CNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF-DDSLN 244
+ V + I Y+K C+ + +E VF+ I +V WN++I G + ++ ++++
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP--DLVVWNTMISGYSMNEELSEEAVK 331
Query: 245 FYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMY 303
+R M G RPD + V + S+C + Q + +H I + +SV N LIS+Y
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLY 391
Query: 304 SKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVL 363
K G++ AR++FD M + VS+ MI GYAQ G EAL L+ M +G P+ +T +
Sbjct: 392 YKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFV 451
Query: 364 SMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
+++S C G ++ G+ +F+ + ++ + +ID+ + G + +A A+P
Sbjct: 452 AVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY 511
Query: 423 KT-VVSWTTMIAGC 435
K V+W ++ C
Sbjct: 512 KPGSVAWAALLGAC 525
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 174/403 (43%), Gaps = 36/403 (8%)
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
F T L ++ + L KS+H+ + V + + N +++ Y+KC L A F
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 215 GIEE-----------------------------GLRTVVSWNSIIGGCTYGDKFDDSLNF 245
EE VS+N++I G + ++
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
++ M GF D T+ L+++C L+ + +H + GFD SV N ++ YSK
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 306 CGDIDSARFLFDGMCD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
G + A +F GM + R VSW +MI Y Q + +AL L+ M G D+ T+ S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG---SIGDARELFYALP 421
+++ L G+ F G N V + LID YSKCG + D+ ++F +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 422 EKTVVSWTTMIAGCALNGEFV-EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGW 480
+V W TMI+G ++N E EA+ F QM + RP+ +F+ V AC++ +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 481 GYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMP 523
L K + + ++ + + L + G L++A MP
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 313/597 (52%), Gaps = 6/597 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I V ++ +L LF ++ ++++ P+ + AC+ L + IH HI+
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
+ D + ++D Y KC R+ A+KLF+ MP++++ SW ++ G+ Q ++ +
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
LF +M G++ D + + L VH++ I + D V N+ I YA
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCT-YGDKFD--DSLNFYRHMIYDGFRPDV 258
KC+ L A VF VV +N++I G + G +++ ++LN +R M + RP +
Sbjct: 397 KCDCLTDARKVFDIFAAA--DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
T VSLL + +L + +H YG +LD+ + LI +YS C + +R +FD
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + V W +M +GY Q+ + +EAL LF ++ + E PD T +M++ G +++LG
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ F GL+ N + NAL+DMY+KCGS DA + F + + VV W ++I+ A +
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
GE +AL + +MM + PN +TF+ VL AC+HAG +E G F LM + + + PE H
Sbjct: 635 GEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEH 693
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
Y CM LLGR G+L +A + ++ MP K A +W +LL C N+E+ E+ A +
Sbjct: 694 YVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSD 753
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
P + + ++NIYA G W +R MK V K PG+S + IN + F +D
Sbjct: 754 PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKD 810
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 234/470 (49%), Gaps = 10/470 (2%)
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
Y ++HG I+ D ++ ++++Y++ + A K+F+KMP+R++ SW+ M+
Sbjct: 62 YQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACN 121
Query: 132 QMGFLEKVLCLFYNM-RLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGVDA 188
G E+ L +F R + + QA + + ++ + SF + G D
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
DV V I Y K ++ A LVF + E ++ V+W ++I GC + SL +
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPE--KSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
++ D PD + ++LS+C L G+ +H+H + YG ++D S++N LI Y KCG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 309 IDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISG 368
+ +A LF+GM ++ +SWT ++SGY Q EA+ LF +M G PD+ S+++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 369 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSW 428
C AL G Y L ++ V N+LIDMY+KC + DAR++F VV +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 429 TTMIAGCALNG---EFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
MI G + G E EAL++F M +RP+ +TF+++L+A L L
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 535
M K Y +N ++ S + D+ LK++ M +K D IW ++
Sbjct: 480 MFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMF 527
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 202/599 (33%), Positives = 311/599 (51%), Gaps = 46/599 (7%)
Query: 60 IAKACAKLSDFLYSQMIHGH-IVKSPFWS----------DIFVQTTMVDMYAKCDRLDCA 108
I +A FLY+ ++H + ++KS ++ ++F ++ Y+K +
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF--VTVMGLTQAAI 166
F+K+PDRD +WN +I G++ G + + YN + A+ VT+M + + +
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA-YNTMMRDFSANLTRVTLMTMLKLSS 150
Query: 167 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSW 226
H+SL K +H I +G ++ + V + + YA + A+ VF G+++ R V +
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD--RNTVMY 208
Query: 227 NSIIGGCTYGDKFDDSLNFYRHMIYD------------------------------GFRP 256
NS++GG +D+L +R M D G +
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D S+L +C A+ +G+ +H+ I F + V + LI MY KC + A+ +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D M + VSWTAM+ GY Q G +EA+++F M+ +G PD T+ IS C +LE
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
G F A + GL V V N+L+ +Y KCG I D+ LF + + VSWT M++ A
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
G VE + LF +M++ L+P+ VT V+ AC+ AG +EKG YF LMT Y + P +
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSI 508
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HYSCM DL R G+L+EA+ F+ MP DA W TLL AC+ N+EIG++ A L E
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
L+PH A Y +++IYA G+WD VA LR M+ VKK PGQS + GK +F+ +D
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADD 627
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 153/322 (47%), Gaps = 4/322 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I+ A +A+ FR MK ++ + F + AC L + IH I+
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
++ F I+V + ++DMY KC L A +FD+M ++V SW AM+VG+ Q G E+ +
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F +M+ GI D T+ A + L H I G+ V+V N+ ++ Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC D+ + +F E +R VSW +++ + +++ + M+ G +PD T+
Sbjct: 418 KCGDIDDSTRLFN--EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 262 VSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
++S+C + +G R YG + + +I ++S+ G ++ A +GM
Sbjct: 476 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 321 -DRTRVSWTAMISGYAQKGDLD 341
+ WT ++S KG+L+
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLE 557
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + W + + A +A+ +F M+++ I+P++ T ACA +S
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
HG + S + V ++V +Y KC +D + +LF++M RD SW AM+ +AQ G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
+ + LF M G++ D VT+ G+ A A
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 193/586 (32%), Positives = 313/586 (53%), Gaps = 6/586 (1%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIH 77
++ W + N+A AL +F+ M+ + +E NN T + AC + S + +H
Sbjct: 315 SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 78 GHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW-NAMIVGFAQMGFL 136
+ KS F+ D V ++ MY+K +D + ++F+ + D + N MI F+Q
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKP 434
Query: 137 EKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 196
K + LF M G++ D +V L L+L K VH + + G+ D++V ++
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSL 491
Query: 197 ISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRP 256
+ Y+KC L+ + +F+GI + W S+I G +++ + M+ DG P
Sbjct: 492 FTLYSKCGSLEESYKLFQGIP--FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSP 549
Query: 257 DVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLF 316
D +T+ ++L+ C +L +G+ +H + + G D + + + L++MYSKCG + AR ++
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 317 DGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALE 376
D + + VS +++ISGY+Q G + + LF M +G D + S++ S
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 377 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCA 436
LG Y GL V ++L+ MYSK GSI D + F + +++WT +IA A
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 437 LNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPEL 496
+G+ EAL +++ M E +P++VTF+ VL AC+H G +E+ + + N M K Y + PE
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPEN 789
Query: 497 NHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
HY CM D LGR G+L+EA F+ +M IK DA +WGTLL ACKIH +E+G+ A + E
Sbjct: 790 RHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIE 849
Query: 557 LEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
LEP A Y+ ++NI A G WD V R +MK V+K PG S V
Sbjct: 850 LEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 239/462 (51%), Gaps = 10/462 (2%)
Query: 12 KIYR---SSTINQWNSQIREAVDKNEAHKALL-LFRRMKKNDIEPNNLTFPFIAKACAKL 67
K++R S+ + WN+ I A+ +N+ + A+ LF M +P++ T+ + ACA L
Sbjct: 206 KVFRDSLSANVYCWNTIIAGAL-RNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL 264
Query: 68 SDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMI 127
+ +++ ++K D+FV T +VD+YAKC + A ++F ++P+ V SW M+
Sbjct: 265 EKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 128 VGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
G+ + L +F MR G++ + TV + A + VH++ G
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 383
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
D SV IS Y+K D+ ++E VF +++ R + N +I + K ++ +
Sbjct: 384 LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFT 442
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M+ +G R D +V SLLS C L G+ VH + + G LD++V ++L ++YSKCG
Sbjct: 443 RMLQEGLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG 499
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMIS 367
++ + LF G+ + W +MISG+ + G L EA+ LF M G PD T+ ++++
Sbjct: 500 SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Query: 368 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS 427
C +L GK Y G+ + + +AL++MYSKCGS+ AR+++ LPE VS
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 428 WTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQA 469
+++I+G + +G + LF M+ + ++L+A
Sbjct: 620 CSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 238/493 (48%), Gaps = 16/493 (3%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
++L F +M E N +++ + AC+ L L+S+++ H +K ++ V++ +
Sbjct: 132 EESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESAL 191
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ-AD 154
+D+++K R + AYK+F +V WN +I G + V LF+ M VG Q D
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPD 250
Query: 155 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFR 214
T + A + L K V + I G + DV VC + YAKC + A VF
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 215 GIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEAL 274
I +VVSW ++ G T + +L ++ M + G + TV S++S+C P +
Sbjct: 310 RIPN--PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 275 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSW-TAMISG 333
+ VH+ GF LD SV LISMYSK GDID + +F+ + D R + MI+
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS 427
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 393
++Q +A+RLF M G D +V S++S L LGK Y GL +
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLD 484
Query: 394 VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMME 453
+ V ++L +YSKCGS+ ++ +LF +P K W +MI+G G EA+ LF +M++
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 454 LDLRPNRVTFLAVLQACTHAGFLEKG---WGYFNLMTKVYQVNPELNHYSCMADLLGRKG 510
P+ T AVL C+ L +G GY T ++ ++ S + ++ + G
Sbjct: 545 DGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY----TLRAGIDKGMDLGSALVNMYSKCG 600
Query: 511 KLKEALDFVQSMP 523
LK A +P
Sbjct: 601 SLKLARQVYDRLP 613
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 227/485 (46%), Gaps = 22/485 (4%)
Query: 59 FIAKACAKLSDFLYSQMIHGHIVKS---PFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
F ++ ++L + ++++ H+++ PF D+F+ +++ Y+ + A KLFD +
Sbjct: 53 FNDQSNSRLCNLRTTKILQAHLLRRYLLPF--DVFLTKSLLSWYSNSGSMADAAKLFDTI 110
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSL 173
P DV S N MI G+ Q E+ L F M +G +A+ ++ + A A+ A S
Sbjct: 111 PQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE 170
Query: 174 LKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGC 233
L H+ I +G V + I ++K + A VFR + V WN+II G
Sbjct: 171 LVCCHT--IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR--DSLSANVYCWNTIIAGA 226
Query: 234 TYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDV 293
+ + + M +PD T S+L++C E L G++V + I G + DV
Sbjct: 227 LRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DV 285
Query: 294 SVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 353
V ++ +Y+KCG + A +F + + + VSWT M+SGY + D AL +F M +
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHS 345
Query: 354 GEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 413
G + TV S+IS CG+ + + G + V ALI MYSK G I +
Sbjct: 346 GVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLS 405
Query: 414 RELFYALPE---KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
++F L + + +V+ MI + + + +A+ LF +M++ LR + + ++L
Sbjct: 406 EQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL 463
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
++ GY T + +L S + L + G L+E+ Q +P K D
Sbjct: 464 DCLNLGKQVHGY----TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNAC 518
Query: 531 WGTLL 535
W +++
Sbjct: 519 WASMI 523
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 318/598 (53%), Gaps = 5/598 (0%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I + A LF MK++ + + +F + K A + F + +HG ++
Sbjct: 69 WNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K + +++V +++VDMYAKC+R++ A++ F ++ + + SWNA+I GF Q+ ++
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188
Query: 142 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
L M + + D T L +LLK VH+ + +G+ ++++CN IS+Y
Sbjct: 189 LLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSY 248
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
A C + A+ VF G+ G + ++SWNS+I G + + + + + M D+ T
Sbjct: 249 ADCGSVSDAKRVFDGLG-GSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK--CGDIDSARFLFDG 318
LLS+C E + G+ +H I G + S N LISMY + G ++ A LF+
Sbjct: 308 YTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES 367
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
+ + +SW ++I+G+AQKG ++A++ F + ++ D +++ C L+LG
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCAL 437
+ A G N V ++LI MYSKCG I AR+ F + K + V+W MI G A
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G +LDLF QM +++ + VTF A+L AC+H G +++G NLM VY++ P +
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRME 547
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HY+ DLLGR G + +A + ++SMP+ D + T L C+ IE+ VA L E+
Sbjct: 548 HYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEI 607
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
EP YV ++++Y+ +W+ A+++ MMK VKK PG S + I + F ED
Sbjct: 608 EPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAED 665
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 211/471 (44%), Gaps = 7/471 (1%)
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+ H + +K SDI+V ++D Y K L A LFD+MP RD SWN MI G+ G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
LE CLF M+ G D + L + K L + VH I G + +V V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM-IYDG 253
+ + YAKC ++ A F+ I E VSWN++I G + M +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISE--PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 254 FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 313
D T LL+ P + VH+ + G ++++ N +IS Y+ CG + A+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 314 FLFDGM-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQS 372
+FDG+ + +SW +MI+G+++ + A LF M+ D+ T ++S C
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 373 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSK--CGSIGDARELFYALPEKTVVSWTT 430
GK GL+ NALI MY + G++ DA LF +L K ++SW +
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVY 490
+I G A G +A+ F + +++ + F A+L++C+ L+ G L TK
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 491 QVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
V+ E S + + + G ++ A Q + K W ++ H
Sbjct: 439 FVSNEFV-ISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 3/255 (1%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S + WNS I A LF +M+++ +E + T+ + AC+ ++ +
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAK--CDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM 133
+HG ++K ++ MY + ++ A LF+ + +D+ SWN++I GFAQ
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 193
G E + F +R I+ D L ++ L L + +H+ G ++ V
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 194 NTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDG 253
++ I Y+KC ++ A F+ I + V+WN++I G SL+ + M
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSK-HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQN 505
Query: 254 FRPDVTTVVSLLSSC 268
+ D T ++L++C
Sbjct: 506 VKLDHVTFTAILTAC 520
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+S + WNS I K + A+ F ++ ++I+ ++ F + ++C+ L+ Q
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMIVGFAQM 133
IH KS F S+ FV ++++ MY+KC ++ A K F ++ + +WNAMI+G+AQ
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Query: 134 GFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH 167
G + L LF M ++ D VT + A H
Sbjct: 489 GLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSH 522
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 322/602 (53%), Gaps = 6/602 (0%)
Query: 15 RSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQ 74
+ + W + I + + L LF RM+ +PN+ TF A+
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
+H +VK+ I V +++++Y KC + A LFDK + V +WN+MI G+A G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
+ L +FY+MRL ++ + + + + K L + +H + G D ++
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF 254
+ AY+KC + A +F+ I + VVSW ++I G D +++++ + M G
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIG-CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 255 RPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARF 314
RP+ T +L++ ++ VH+ + ++ +V L+ Y K G ++ A
Sbjct: 394 RPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 315 LFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGA 374
+F G+ D+ V+W+AM++GYAQ G+ + A+++F + G P+ T S+++ C + A
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 375 -LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIA 433
+ GK F +A L ++ V +AL+ MY+K G+I A E+F EK +VSW +MI+
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 434 GCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVN 493
G A +G+ ++ALD+F +M + ++ + VTF+ V ACTHAG +E+G YF++M + ++
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 494 PELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYR 553
P H SCM DL R G+L++A+ +++MP + + IW T+L AC++H+ E+G A +
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEK 689
Query: 554 LFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTV 613
+ ++P +A YV ++N+YA G W A +R +M VKK PG S + + KT +F
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLA 749
Query: 614 ED 615
D
Sbjct: 750 GD 751
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 243/513 (47%), Gaps = 20/513 (3%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A LF + + +E + F + K A L D L+ + +H +K F D+ V T++
Sbjct: 75 QEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSL 134
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQAD- 154
VD Y K K+FD+M +R+V +W +I G+A+ ++VL LF M+ G Q +
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 155 --FVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAEL 211
F +G L + + + L VH+ + G+D + V N+ I+ Y KC +++ A +
Sbjct: 195 FTFAAALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 212 VFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCP 271
+F E +++VV+WNS+I G ++L + M + R ++ S++ C
Sbjct: 251 LFDKTE--VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Query: 272 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSARFLFDGMCDRTRVSWTAM 330
+ L +H + YGF D ++ L+ YSKC +D+ R + C VSWTAM
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 331 ISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWF--DNYACSG 388
ISG+ Q +EA+ LF M+ G P+ T +++ E+ NY S
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS 428
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLF 448
V AL+D Y K G + +A ++F + +K +V+W+ M+AG A GE A+ +F
Sbjct: 429 ------TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 449 HQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGR 508
++ + ++PN TF ++L C F+ +++ L S + + +
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
Query: 509 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 541
KG ++ A + + K D W +++ H
Sbjct: 543 KGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 180/369 (48%), Gaps = 7/369 (1%)
Query: 104 RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQ 163
RL A+ LFDK P RD S+ +++ GF++ G ++ LF N+ +G++ D + +
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 164 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTV 223
+ + +H I G DVSV + + Y K ++ K VF ++E R V
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--RNV 159
Query: 224 VSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR--LVH 281
V+W ++I G D+ L + M +G +P+ T + L V E V GR VH
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG--VLAEEGVGGRGLQVH 217
Query: 282 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD 341
+ + G D + V N+LI++Y KCG++ AR LFD ++ V+W +MISGYA G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 342 EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 401
EAL +F++M + S+I C L + G + + AL+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 402 DMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
YSKC ++ DA LF + VVSWT MI+G N EA+DLF +M +RPN
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 461 VTFLAVLQA 469
T+ +L A
Sbjct: 398 FTYSVILTA 406
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 130/254 (51%), Gaps = 4/254 (1%)
Query: 221 RTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLL--SSCVCPEALVQGR 278
R S+ S++ G + + ++ + ++ G D + S+L S+ +C E GR
Sbjct: 56 RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF--GR 113
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H I +GF DVSV +L+ Y K + R +FD M +R V+WT +ISGYA+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
DE L LF M+ G P+ T + + + G G GL + V N
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
+LI++Y KCG++ AR LF K+VV+W +MI+G A NG +EAL +F+ M +R
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 459 NRVTFLAVLQACTH 472
+ +F +V++ C +
Sbjct: 294 SESSFASVIKLCAN 307
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 21/117 (17%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K R + WNS I +A KAL +F+ MKK ++ + +TF + AC
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA---- 609
Query: 72 YSQMIHGHIVKSPFWSDIFVQ-----------TTMVDMYAKCDRLDCAYKLFDKMPD 117
G + + + DI V+ + MVD+Y++ +L+ A K+ + MP+
Sbjct: 610 ------GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 215/631 (34%), Positives = 316/631 (50%), Gaps = 59/631 (9%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKK-NDIEPNNLTFPFIAKACAKLSDFLYSQM 75
S I +WN I + ++AL +F+RM + + + N + ++ +L+ L+ +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
D+ M+ Y + L A +LF+ MP+RDV SWN M+ G+AQ G
Sbjct: 122 PE---------RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIGVDADVS 191
++ +F M + + V+ L A + + L KS ++ + VS
Sbjct: 173 VDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL-------VS 221
Query: 192 VCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIY 251
N + + K + A F + +R VVSWN+II G K D++ R +
Sbjct: 222 -WNCLLGGFVKKKKIVEARQFFDSM--NVRDVVSWNTIITGYAQSGKIDEA----RQLFD 274
Query: 252 DGFRPDVTTVVSLLSSCVCPEALVQGR--------------------LVHSHGIHYGFDL 291
+ DV T +++S + + + R V + +L
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKEL 334
Query: 292 -------DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEAL 344
+VS NT+I+ Y++CG I A+ LFD M R VSW AMI+GY+Q G EAL
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 345 RLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 404
RLF ME G + + S +S C ALELGK GG + V NAL+ MY
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 405 SKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFL 464
KCGSI +A +LF + K +VSW TMIAG + +G AL F M L+P+ T +
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 465 AVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPI 524
AVL AC+H G ++KG YF MT+ Y V P HY+CM DLLGR G L++A + +++MP
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 525 KSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANL 584
+ DA IWGTLL A ++H N E+ E A ++F +EP ++ YV ++N+YA GRW V L
Sbjct: 575 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 585 RTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
R M+ VKK PG S + I KT TF+V D
Sbjct: 635 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 206/476 (43%), Gaps = 67/476 (14%)
Query: 114 KMPDRDVASWNAMIVGFAQMGFLEKVLCLF----------YNMRLVGI------------ 151
K D D+ WN I + + G + L +F YN + G
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 152 -----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDL 206
+ D V+ + + + ++L + + I + DV NT +S YA+ +
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKAREL----FEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 207 KMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVV--SL 264
A VF + E + VSWN+++ K +++ ++ R + V L
Sbjct: 174 DDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFKS------RENWALVSWNCL 225
Query: 265 LSSCVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRT 323
L V + +V+ R S + DV NT+I+ Y++ G ID AR LFD +
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 324 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFD 382
+WTAM+SGY Q ++EA LF M E V+ +M++G Q +E+ K FD
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERMEMAKELFD 336
Query: 383 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFV 442
C NV N +I Y++CG I +A+ LF +P++ VSW MIAG + +G
Sbjct: 337 VMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 443 EALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCM 502
EAL LF QM R NR +F + L C LE G L ++ + E +
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG---KQLHGRLVKGGYETGCFVGN 448
Query: 503 ADLLG--RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFE 556
A LL + G ++EA D + M K D W T++ H GE VA R FE
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRH---GFGE-VALRFFE 499
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 332 bits (852), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 294/577 (50%), Gaps = 35/577 (6%)
Query: 73 SQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
++ +H +++ S + ++ +Y L A LF + V +W ++I F
Sbjct: 24 AKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
K L F MR G D + ++ L +SVH F + +G+D D+
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 193 CNTWISAYAKC-------------------------NDLKMAELVFR-GIEEGLRT---- 222
N ++ YAK D+K + GI+ R
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 223 ----VVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
VVS+N+II G ++D+L R M +PD T+ S+L +++G+
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
+H + I G D DV + ++L+ MY+K I+ + +F + R +SW ++++GY Q G
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
+EALRLF M A P V S+I C L LGK Y GG N+ + +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
AL+DMYSKCG+I AR++F + VSWT +I G AL+G EA+ LF +M ++P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
N+V F+AVL AC+H G +++ WGYFN MTKVY +N EL HY+ +ADLLGR GKL+EA +F
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRW 578
+ M ++ +W TLL +C +H+N+E+ E VA ++F ++ + YV M N+YA GRW
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562
Query: 579 DGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+A LR M++ ++K P S + + KT F D
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 233/484 (48%), Gaps = 44/484 (9%)
Query: 12 KIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFL 71
K +S + W S IR D++ KAL F M+ + P++ FP + K+C + D
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 72 YSQMIHGHIVKSPFWSDIFVQTTMVDMYAKC-------------DRL------------- 105
+ + +HG IV+ D++ +++MYAK D +
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 106 ----------DCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
D ++F+ MP +DV S+N +I G+AQ G E L + M ++ D
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 156 VTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVF 213
T+ + I ++++ ++ K +H + I G+D+DV + ++ + YAK ++ +E VF
Sbjct: 243 FTLSSVL--PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 214 RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEA 273
+ R +SWNS++ G +++++L +R M+ +P S++ +C
Sbjct: 301 SRLY--CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 274 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISG 333
L G+ +H + + GF ++ + + L+ MYSKCG+I +AR +FD M VSWTA+I G
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 334 YAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKD 392
+A G EA+ LF M+ G P+ V +++++ C G + E +F++ GL
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 393 NVMVCNALIDMYSKCGSIGDARELFYAL-PEKTVVSWTTMIAGCALNGEFVEALDLFHQM 451
+ A+ D+ + G + +A + E T W+T+++ C+++ A + ++
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 452 MELD 455
+D
Sbjct: 539 FTVD 542
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 303/579 (52%), Gaps = 39/579 (6%)
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
+ +QMI ++ PF S + + ++ LD + K+ + + ++ SWN I GF
Sbjct: 72 IQAQMIINGLILDPFASSRLIAFCAL---SESRYLDYSVKILKGIENPNIFSWNVTIRGF 128
Query: 131 AQMGFLEKVLCLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 187
++ ++ L+ M G + D T L + + SL + + + ++
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188
Query: 188 ADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYR 247
V N I +A C D++ A VF E +R +VSWN +I G + + ++ Y+
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFD--ESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 248 HMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M +G +PD T++ L+SSC L +G+ + + G + + ++N L+ M+SKCG
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLD-------------------------- 341
DI AR +FD + RT VSWT MISGYA+ G LD
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 342 -----EALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 396
+AL LF M+ + PD +T++ +S C Q GAL++G W Y L NV +
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVAL 426
Query: 397 CNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDL 456
+L+DMY+KCG+I +A +F+ + + +++T +I G AL+G+ A+ F++M++ +
Sbjct: 427 GTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGI 486
Query: 457 RPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEAL 516
P+ +TF+ +L AC H G ++ G YF+ M + +NP+L HYS M DLLGR G L+EA
Sbjct: 487 APDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEAD 546
Query: 517 DFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGG 576
++SMP+++DA +WG LL C++H N+E+GE A +L EL+P + YV + +Y
Sbjct: 547 RLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEAN 606
Query: 577 RWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
W+ R MM V+K PG S + +NG C F V D
Sbjct: 607 MWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRD 645
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 225/474 (47%), Gaps = 38/474 (8%)
Query: 18 TINQWNSQIREAVDKNEAHKALLLFRRMKKN---DIEPNNLTFPFIAKACAKLSDFLYSQ 74
I WN IR + ++ LL+++M ++ + P++ T+P + K CA L
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG 134
MI GH++K V + M+A C ++ A K+FD+ P RD+ SWN +I G+ ++G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 135 FLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 194
EK + ++ M G++ D VT++GL + L+ K + + G+ + + N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 195 TWISAYAKCNDLKMAELVFRGIEEGLRTVVS----------------------------- 225
+ ++KC D+ A +F +E+ RT+VS
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEK--RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 226 --WNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSH 283
WN++IGG + D+L ++ M +PD T++ LS+C AL G +H +
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 284 GIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEA 343
Y L+V++ +L+ MY+KCG+I A +F G+ R +++TA+I G A GD A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 344 LRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALID 402
+ F M AG PD +T + ++S C G ++ G+ +F L + + ++D
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 403 MYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCALNGEFVEALDLFHQMMELD 455
+ + G + +A L ++P E W ++ GC ++G +++ELD
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 162/367 (44%), Gaps = 40/367 (10%)
Query: 12 KIYRSSTIN---QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLS 68
K++ S + WN I EA KA+ +++ M+ ++P+++T + +C+ L
Sbjct: 212 KVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLG 271
Query: 69 DFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIV 128
D + + ++ ++ I + ++DM++KC + A ++FD + R + SW MI
Sbjct: 272 DLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMIS 331
Query: 129 GFAQMGFL-------------------------------EKVLCLFYNMRLVGIQADFVT 157
G+A+ G L + L LF M+ + D +T
Sbjct: 332 GYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 158 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIE 217
++ A L + +H + + +V++ + + YAKC ++ A VF GI+
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 218 EGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQG 277
R +++ +IIGG +++++ MI G PD T + LLS+C C ++Q
Sbjct: 452 T--RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC-CHGGMIQT 508
Query: 278 RLVHSHGIHYGFDLDVSV--INTLISMYSKCGDIDSARFLFDGM-CDRTRVSWTAMISGY 334
+ + F+L+ + + ++ + + G ++ A L + M + W A++ G
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
Query: 335 AQKGDLD 341
G+++
Sbjct: 569 RMHGNVE 575
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 314/575 (54%), Gaps = 19/575 (3%)
Query: 52 PNNLTFPFIAKACAKLSDFL-YSQMIHGHIVKSP-FWSDIFVQTTMVDMYAKCDR-LDCA 108
PN+ + + +AC+ SDF+ ++ G ++K+ F SD+ V +++DM+ K + + A
Sbjct: 164 PNDYCYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 109 YKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHA 168
YK+FDKM + +V +W MI QMGF + + F +M L G ++D T+ + A
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 169 KHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN---DLKMAELVFRGIEEGLRTVVS 225
++LSL K +HS+ I G+ DV + + YAKC+ + VF +E+ +V+S
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED--HSVMS 338
Query: 226 WNSIIGG----CTYGDKFDDSLNFYRHMIYDG-FRPDVTTVVSLLSSCVCPEALVQGRLV 280
W ++I G C +++N + MI G P+ T S +C G+ V
Sbjct: 339 WTALITGYMKNCNLAT---EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 281 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL 340
G + SV N++ISM+ K ++ A+ F+ + ++ VS+ + G + +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 341 DEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 400
++A +L + T S++SG G++ G+ + GL N VCNAL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 401 IDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNR 460
I MYSKCGSI A +F + + V+SWT+MI G A +G + L+ F+QM+E ++PN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 461 VTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQ 520
VT++A+L AC+H G + +GW +FN M + +++ P++ HY+CM DLL R G L +A +F+
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 521 SMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDG 580
+MP ++D +W T L AC++H N E+G+ A ++ EL+P+ A Y++++NIYA G+W+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 581 VANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+R MK + K G S + + K F V D
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGD 730
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 235/499 (47%), Gaps = 18/499 (3%)
Query: 16 SSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEP-NNLTFPFIAKACAKLSDFLYSQ 74
S+ IN + I ++ + A+ M ++ I P +++TF + K+C + DF +
Sbjct: 23 SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGK 82
Query: 75 MIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMP---DRDVASWNAMIVGFA 131
++H +++ D + +++ +Y+K A +F+ M RDV SW+AM+ +
Sbjct: 83 LVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYG 142
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADV 190
G + +F +G+ + + +A ++ + + + F + G ++DV
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 191 SVCNTWISAYAKC-NDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
V + I + K N + A VF + E VV+W +I C +++ F+ M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--- 306
+ GF D T+ S+ S+C E L G+ +HS I G DV +L+ MY+KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSAD 318
Query: 307 GDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEV-PDLVTVLS 364
G +D R +FD M D + +SWTA+I+GY + +L EA+ LF M G V P+ T S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 365 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKT 424
CG +GK A GL N V N++I M+ K + DA+ F +L EK
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 425 VVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFN 484
+VS+ T + G N F +A L ++ E +L + TF ++L + G + KG
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE---Q 495
Query: 485 LMTKVYQVNPELNHYSCMA 503
+ ++V ++ N C A
Sbjct: 496 IHSQVVKLGLSCNQPVCNA 514
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 36 HKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTM 95
+A L + + ++ + TF + A + + IH +VK + V +
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 96 VDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADF 155
+ MY+KC +D A ++F+ M +R+V SW +MI GFA+ GF +VL F M G++ +
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 156 VTVMGLTQAAIH 167
VT + + A H
Sbjct: 576 VTYVAILSACSH 587
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 329 bits (844), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 325/596 (54%), Gaps = 14/596 (2%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I D N+ AL RMK + + T+ C FL + +V
Sbjct: 145 WNT-ILSGFDDNQI--ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMG-FLEKVL 140
K+ SD+ V + + MY++ A ++FD+M +D+ SWN+++ G +Q G F + +
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F +M G++ D V+ + H L L + +H I G ++ + V N +S Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+KC L+ + VF + E R VVSW ++I DD+++ + +M +DG P+ T
Sbjct: 322 SKCGVLEAVKSVFHQMSE--RNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVT 374
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
V L+++ C E + +G +H I GF + SV N+ I++Y+K ++ A+ F+ +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG--QSGALELG 378
R +SW AMISG+AQ G EAL++F + AA +P+ T S+++ + +++ G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
+ + GL +V +AL+DMY+K G+I ++ ++F + +K WT++I+ + +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNH 498
G+F ++LFH+M++ ++ P+ VTFL+VL AC G ++KG+ FN+M +VY + P H
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 499 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELE 558
YSCM D+LGR G+LKEA + + +P + ++L +C++H N+++G VA E++
Sbjct: 614 YSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK 673
Query: 559 PHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVE 614
P + YV+M NIYA WD A +R M++ V K G S + + + T++
Sbjct: 674 PELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQ 729
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/530 (26%), Positives = 247/530 (46%), Gaps = 23/530 (4%)
Query: 23 NSQIREAVDKNEAHKALLLFR---RMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGH 79
N I E++ +N +AL +F+ ++ + +T KAC D IHG
Sbjct: 44 NHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGF 101
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
S F S + V ++ MY K R D A +F+ + D DV SWN ++ GF +
Sbjct: 102 STTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIA 158
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
L M+ G+ D T + ++ L + S + G+++D+ V N++I+
Sbjct: 159 LNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITM 218
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD-DSLNFYRHMIYDGFRPDV 258
Y++ + A VF E + ++SWNS++ G + F +++ +R M+ +G D
Sbjct: 219 YSRSGSFRGARRVFD--EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDH 276
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
+ S++++C L R +H I G++ + V N L+S YSKCG +++ + +F
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M +R VSWT MIS + D+A+ +F M G P+ VT + +I+ + ++ G
Sbjct: 337 MSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALN 438
G V N+ I +Y+K ++ DA++ F + + ++SW MI+G A N
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 439 GEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWG---YFNLMTKVYQVNPE 495
G EAL +F + PN TF +VL A A + G + +L+ P
Sbjct: 452 GFSHEALKMFLSAAA-ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 510
Query: 496 LNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
++ S + D+ ++G + E+ M K+ +W +++ A H + E
Sbjct: 511 VS--SALLDMYAKRGNIDESEKVFNEMSQKNQF-VWTSIISAYSSHGDFE 557
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 292/550 (53%), Gaps = 13/550 (2%)
Query: 76 IHGHIVKSPFWSD----------IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNA 125
+H I+K+P + + + V +++ +YAKC +L A KLFD+MP RDV S N
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 126 MIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 185
+ GF + E L M G D T+ + + + K +H+ I G
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 186 VDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNF 245
D ++SV N I++Y KC VF G+ R V++ ++I G + +D L
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSH--RNVITLTAVISGLIENELHEDGLRL 243
Query: 246 YRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 305
+ M P+ T +S L++C + +V+G+ +H+ YG + ++ + + L+ MYSK
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSK 303
Query: 306 CGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSM 365
CG I+ A +F+ + VS T ++ G AQ G +EA++ F M AG D V ++
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 366 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTV 425
+ +L LGK + N V N LI+MYSKCG + D++ +F +P++
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 426 VSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNL 485
VSW +MIA A +G + AL L+ +M L+++P VTFL++L AC+H G ++KG N
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 486 MTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIE 545
M +V+ + P HY+C+ D+LGR G LKEA F+ S+P+K D IW LL AC H + E
Sbjct: 484 MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 546 IGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHIN 605
+GEY A +LF+ P S++ ++ +ANIY+ G+W A MK V K G S + I
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Query: 606 GKTCTFTVED 615
KT +F VED
Sbjct: 604 HKTHSFVVED 613
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 5/313 (1%)
Query: 32 KNEAHK-ALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIF 90
+NE H+ L LF M++ + PN++T+ AC+ + Q IH + K S++
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 91 VQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVG 150
+++ ++DMY+KC ++ A+ +F+ + D S ++VG AQ G E+ + F M G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 151 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAE 210
++ D V + + L L K +HS I + V N I+ Y+KC DL ++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 211 LVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVC 270
VFR + + R VSWNS+I +L Y M +P T +SLL +C
Sbjct: 413 TVFRRMPK--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSH 470
Query: 271 PEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVS-WT 328
+ +GR L++ +G + +I M + G + A+ D + + W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 329 AMISGYAQKGDLD 341
A++ + GD +
Sbjct: 531 ALLGACSFHGDTE 543
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDF-----LYSQM- 75
WNS I AL L+ M +++P ++TF + AC+ + L ++M
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMK 485
Query: 76 -IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDR-DVASWNAMI 127
+HG ++ + T ++DM + L A D +P + D W A++
Sbjct: 486 EVHGIEPRTEHY------TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 314/620 (50%), Gaps = 22/620 (3%)
Query: 15 RSSTINQ--WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + AL FR M ++EP++ T + AC+ L
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+ + +H + ++ + F+ T+V MY K +L + L RD+ +WN ++
Sbjct: 218 LMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDA 188
Q L + L M L G++ D T+ + A H + L K +H++ + G +D
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ V + + Y C + VF G+ + R + WN++I G + + ++L +
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFD--RKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 249 MIYD-GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 307
M G + TT+ ++ +CV A + +H + G D D V NTL+ MYS+ G
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME--------AAGEV--- 356
ID A +F M DR V+W MI+GY ++AL L M+ A V
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 357 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 416
P+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 417 FYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFL 476
F +P+K V++W +I ++G EA+DL MM ++PN VTF++V AC+H+G +
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 477 EKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTLL 535
++G F +M Y V P +HY+C+ DLLGR G++KEA + MP + AG W +LL
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 536 CACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKK 595
A +IH N+EIGE A L +LEP+ A+ YV +ANIY+ G WD +R MK V+K
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 596 FPGQSLVHINGKTCTFTVED 615
PG S + + F D
Sbjct: 755 EPGCSWIEHGDEVHKFVAGD 774
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 176/651 (27%), Positives = 300/651 (46%), Gaps = 62/651 (9%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLY 72
I +S + W +R V N +A+L + M I+P+N FP + KA A L D
Sbjct: 56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 73 SQMIHGHIVKSPFWSD-IFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFA 131
+ IH H+ K + D + V T+V++Y KC YK+FD++ +R+ SWN++I
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 132 QMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLLKSVHSFGIHIGVDA 188
E L F M ++ T++ + A + + L + K VH++G+ G +
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 234
Query: 189 DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRH 248
+ + NT ++ Y K L ++++ G R +V+WN+++ ++ ++L + R
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSF--GGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 249 MIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCG 307
M+ +G PD T+ S+L +C E L G+ +H++ + G D + V + L+ MY C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 308 DIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGEVPDLVTVLSMI 366
+ S R +FDGM DR W AMI+GY+Q EAL LF M E+AG + + T+ ++
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 367 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVV 426
C +SGA + + GL + V N L+DMYS+ G I A +F + ++ +V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 427 SWTTMIAGCALNGEFVEALDLFHQMMELD-----------LRPNRVTFLAVLQACTHAGF 475
+W TMI G + +AL L H+M L+ L+PN +T + +L +C
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 476 LEKGW----------------------------GYFNLMTKVYQVNPELN--HYSCMADL 505
L KG G + KV+ P+ N ++ +
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 506 LGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRL---FELEP 559
G G +EA+D ++ M +K + + ++ AC ++ G + Y + + +EP
Sbjct: 593 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 560 HSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVK-----KFPGQSLVHIN 605
S+ Y + ++ GR L MM R+ K G S +H N
Sbjct: 653 -SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 300/574 (52%), Gaps = 21/574 (3%)
Query: 42 FRRMKKNDIEPNNLTFPFIAKACAKLSDF--LYSQMIHGHIVKSPFWSDIFVQTTMVDMY 99
F ++ D+E + F F+ K C ++ + +QM+ + K F ++
Sbjct: 28 FEEARRGDLERD---FLFLLKKCISVNQLRQIQAQMLLHSVEKPNF---------LIPKA 75
Query: 100 AKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQM-GFLEKVLCLFYNMRLVGIQADFVTV 158
+ + + LF + + S+N MI G E L L+ M+ G++ D T
Sbjct: 76 VELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTY 135
Query: 159 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEE 218
+ A + + + +SVHS +G++ DV + ++ I YAKC + A +F I E
Sbjct: 136 NFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE 195
Query: 219 GLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGR 278
R VSWNS+I G + D+++ +R M +GF PD T+VS+L +C L GR
Sbjct: 196 --RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR 253
Query: 279 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKG 338
L+ I L + + LISMY KCGD+DSAR +F+ M + RV+WTAMI+ Y+Q G
Sbjct: 254 LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNG 313
Query: 339 DLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 398
EA +LFF ME G PD T+ +++S CG GALELGK + +A L+ N+ V
Sbjct: 314 KSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVAT 373
Query: 399 ALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRP 458
L+DMY KCG + +A +F A+P K +W MI A G EAL LF +M + P
Sbjct: 374 GLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPP 430
Query: 459 NRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDF 518
+ +TF+ VL AC HAG + +G YF+ M+ ++ + P++ HY+ + DLL R G L EA +F
Sbjct: 431 SDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF 490
Query: 519 VQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL-EPHSAAPYVEMANIYALGGR 577
++ P K D + +L AC +++ I E L E+ E +A YV +N+ A
Sbjct: 491 MERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKM 550
Query: 578 WDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTF 611
WD A +R +M+ V K PG S + I G+ F
Sbjct: 551 WDESAKMRALMRDRGVVKTPGCSWIEIEGELMEF 584
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 195/392 (49%), Gaps = 6/392 (1%)
Query: 33 NEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQ 92
N+ AL L+RRMK + ++P+ T+ F+ ACAKL + + +H + K D+ +
Sbjct: 111 NDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 170
Query: 93 TTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQ 152
+++ MYAKC ++ A KLFD++ +RD SWN+MI G+++ G+ + + LF M G +
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 153 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELV 212
D T++ + A H L + + I + + + IS Y KC DL A V
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 213 FRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPE 272
F + + R V+W ++I + K ++ + M G PD T+ ++LS+C
Sbjct: 291 FNQMIKKDR--VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 273 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMIS 332
AL G+ + +H ++ V L+ MY KCG ++ A +F+ M + +W AMI+
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 333 GYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLK 391
YA +G EAL LF M P +T + ++S C +G + G ++F + GL
Sbjct: 409 AYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLV 465
Query: 392 DNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+ +ID+ S+ G + +A E P K
Sbjct: 466 PKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 160/358 (44%), Gaps = 15/358 (4%)
Query: 10 LNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSD 69
++I T++ WNS I + A A+ LFR+M++ EP+ T + AC+ L D
Sbjct: 190 FDEITERDTVS-WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 70 FLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVG 129
+++ + F+ + ++ MY KC LD A ++F++M +D +W AMI
Sbjct: 249 LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITV 308
Query: 130 FAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 189
++Q G + LF+ M G+ D T+ + A L L K + + + + +
Sbjct: 309 YSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHN 368
Query: 190 VSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHM 249
+ V + Y KC ++ A VF + ++ +WN++I + ++L + M
Sbjct: 369 IYVATGLVDMYGKCGRVEEALRVFEAMP--VKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 250 IYDGFRPDVTTVVSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD 308
P T + +LS+CV + QG R H +G + +I + S+ G
Sbjct: 427 ---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGM 483
Query: 309 IDSA-RFL--FDGMCDRTRVSWTAMISGYAQKGDL---DEALRLFFAMEAAGEVPDLV 360
+D A F+ F G D + A++ ++ D+ ++A+R+ M+ A + V
Sbjct: 484 LDEAWEFMERFPGKPD--EIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 292/582 (50%), Gaps = 9/582 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN+ I A LF M + P+ T + C + + +HG
Sbjct: 119 WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
KS D V+ ++ Y+KC L A LF +M D+ SWN MI ++Q G E+ +
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F NM ++ VT++ L A H H + +H + G+ D+SV + + AY+
Sbjct: 239 VFKNMFEKNVEISPVTIINLLSA--HVSH----EPLHCLVVKCGMVNDISVVTSLVCAYS 292
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
+C L AE ++ ++ ++V SI+ D ++ ++ + D +
Sbjct: 293 RCGCLVSAERLYASAKQD--SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 262 VSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCD 321
V +L C + G +H + I G V+N LI+MYSK D+++ FLF+ + +
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 322 RTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGEVPDLVTVLSMISGCGQSGALELGKW 380
+SW ++ISG Q G A +F M G +PD +T+ S+++GC Q L LGK
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
Y ++ VC ALIDMY+KCG+ A +F ++ +W +MI+G +L+G
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
AL + +M E L+P+ +TFL VL AC H GF+++G F M K + ++P L HY+
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
M LLGR EAL + M IK D+ +WG LL AC IHR +E+GEYVA ++F L+
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+ YV M+N+YA WD V +R MMK N + G S +
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 271/561 (48%), Gaps = 33/561 (5%)
Query: 13 IYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFP-FIAKACAKLSDF- 70
+YR ++ ++S ++ + + + +FR + ++ + PN+ T F+ + F
Sbjct: 9 LYRD--LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFK 66
Query: 71 LYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGF 130
L + + H+ KS ++V+T+++++Y K + A LFD+MP+RD WNA+I G+
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 126
Query: 131 AQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 190
++ G+ LF M G T++ L +S +SVH G++ D
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 191 SVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMI 250
V N IS Y+KC +L AE++FR +++ ++ VSWN++IG + ++++ +++M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 251 YDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 310
T+++LLS+ V E L H + G D+SV+ +L+ YS+CG +
Sbjct: 245 EKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA L+ + V T+++S YA+KGD+D A+ F D V ++ ++ GC
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
+S +++G YA GL +V N LI MYSK + LF L E ++SW +
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 431 MIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKV 489
+I+GC +G A ++FHQMM L P+ +T ++L C+ L G L
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGK---ELHGYT 475
Query: 490 YQVNPELNHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIG 547
+ N E ++ C A D+ + G +A +S+ A W +++
Sbjct: 476 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TWNSMIS----------- 523
Query: 548 EYVAYRLFELEPHSAAPYVEM 568
Y L L+ + + Y+EM
Sbjct: 524 ---GYSLSGLQHRALSCYLEM 541
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/595 (32%), Positives = 309/595 (51%), Gaps = 3/595 (0%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WNS I +AL ++ +K + I P++ T + A L Q +HG
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFA 233
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
+KS S + V +V MY K R A ++FD+M RD S+N MI G+ ++ +E+ +
Sbjct: 234 LKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV 293
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
+F L + D +TV + +A H + LSL K ++++ + G + +V N I Y
Sbjct: 294 RMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVY 352
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
AKC D+ A VF +E + VSWNSII G +++ ++ M+ + D T
Sbjct: 353 AKCGDMITARDVFNSME--CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+ L+S L G+ +HS+GI G +D+SV N LI MY+KCG++ + +F M
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
V+W +IS + GD L++ M + VPD+ T L + C A LGK
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 381 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGE 440
G + + + NALI+MYSKCG + ++ +F + + VV+WT MI + GE
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 441 FVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYS 500
+AL+ F M + + P+ V F+A++ AC+H+G +++G F M Y+++P + HY+
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650
Query: 501 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPH 560
C+ DLL R K+ +A +F+Q+MPIK DA IW ++L AC+ ++E E V+ R+ EL P
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Query: 561 SAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
+ +N YA +WD V+ +R +K + K PG S + + F+ D
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGD 765
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 258/468 (55%), Gaps = 4/468 (0%)
Query: 3 ASSLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAK 62
ASSL ++ + + WNS IR +AL + +++++ + P+ TFP + K
Sbjct: 56 ASSLSV-FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIK 114
Query: 63 ACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS 122
ACA L D +++ I+ F SD+FV +VDMY++ L A ++FD+MP RD+ S
Sbjct: 115 ACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS 174
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
WN++I G++ G+ E+ L +++ ++ I D TV + A + + + +H F +
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Query: 183 HIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDS 242
GV++ V V N ++ Y K A VF E +R VS+N++I G + ++S
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD--EMDVRDSVSYNTMICGYLKLEMVEES 292
Query: 243 LNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 302
+ + + D F+PD+ TV S+L +C L + ++++ + GF L+ +V N LI +
Sbjct: 293 VRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDV 351
Query: 303 YSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTV 362
Y+KCGD+ +AR +F+ M + VSW ++ISGY Q GDL EA++LF M E D +T
Sbjct: 352 YAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 363 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 422
L +IS + L+ GK + G+ ++ V NALIDMY+KCG +GD+ ++F ++
Sbjct: 412 LMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT 471
Query: 423 KTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
V+W T+I+ C G+F L + QM + ++ P+ TFL L C
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 242/488 (49%), Gaps = 8/488 (1%)
Query: 53 NNLTFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLF 112
++ PFI++A + S+ + IH ++ S F ++D Y+ + +F
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 113 DKM-PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 171
++ P ++V WN++I F++ G + L + +R + D T + +A
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 172 SLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIG 231
+ V+ + +G ++D+ V N + Y++ L A VF E +R +VSWNS+I
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFD--EMPVRDLVSWNSLIS 180
Query: 232 GCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL 291
G + ++++L Y + PD TV S+L + + QG+ +H + G +
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 292 DVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAME 351
V V N L++MY K AR +FD M R VS+ MI GY + ++E++R+F +E
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LE 298
Query: 352 AAGEV-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 410
+ PDL+TV S++ CG L L K+ NY G V N LID+Y+KCG +
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 411 GDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQAC 470
AR++F ++ K VSW ++I+G +G+ +EA+ LF MM ++ + + +T+L ++
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 471 THAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 530
T L+ G G + K + +L+ + + D+ + G++ ++L SM D
Sbjct: 419 TRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVT 476
Query: 531 WGTLLCAC 538
W T++ AC
Sbjct: 477 WNTVISAC 484
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 304/585 (51%), Gaps = 8/585 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKK--NDIE-PNNLTFPFIAKACAKLSDFLYSQMIHG 78
W + I V E+ L +M +D++ PN T +AC+ L + +HG
Sbjct: 195 WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 254
Query: 79 HIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEK 138
VK+ S FVQ++M Y+K AY F ++ D D+ SW ++I A+ G +E+
Sbjct: 255 FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE 314
Query: 139 VLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 198
+F+ M+ G+ D V + L + K+ H F I D +VCN+ +S
Sbjct: 315 SFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLS 374
Query: 199 AYAKCNDLKMAELVF-RGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPD 257
Y K L +AE +F R EEG + +WN+++ G + +R + G D
Sbjct: 375 MYCKFELLSVAEKLFCRISEEGNKE--AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 258 VTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFD 317
+ S++SSC A++ G+ +H + + DL +SV+N+LI +Y K GD+ A +F
Sbjct: 433 SASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF- 491
Query: 318 GMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALEL 377
D ++W AMI+ Y ++A+ LF M + P +T+++++ C +G+LE
Sbjct: 492 CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 378 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
G+ Y + N+ + ALIDMY+KCG + +RELF A +K V W MI+G +
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
+G+ A+ LF QM E D++P TFLA+L ACTHAG +E+G F M + Y V P L
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLK 670
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFEL 557
HYSC+ DLL R G L+EA V SMP D IWGTLL +C H E+G +A R
Sbjct: 671 HYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVAS 730
Query: 558 EPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
+P + Y+ +AN+Y+ G+W+ R MM+ + V K G S+V
Sbjct: 731 DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 253/547 (46%), Gaps = 12/547 (2%)
Query: 5 SLPPRLNKIYRSSTINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKAC 64
+L R+ + I WNS I+ + ++L F M + P++ T P + AC
Sbjct: 76 NLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSAC 135
Query: 65 AKLSDFLYSQMIHGHIVK-SPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASW 123
A+L F +HG ++K F + V + V Y+KC L A +FD+MPDRDV +W
Sbjct: 136 AELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAW 195
Query: 124 NAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLT---QAAIHAKHLSLLKSVHSF 180
A+I G Q G E L M G D L QA + L + +H F
Sbjct: 196 TAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGF 255
Query: 181 GIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFD 240
+ G+ + V ++ S Y+K + A L FR E G + SW SII +
Sbjct: 256 AVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFR--ELGDEDMFSWTSIIASLARSGDME 313
Query: 241 DSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 300
+S + + M G PD + L++ + QG+ H I + F LD +V N+L+
Sbjct: 314 ESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLL 373
Query: 301 SMYSKCGDIDSARFLFDGMCDR-TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
SMY K + A LF + + + +W M+ GY + + + LF ++ G D
Sbjct: 374 SMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDS 433
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
+ S+IS C GA+ LGK Y L + V N+LID+Y K G + A +F
Sbjct: 434 ASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE 493
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+ V++W MIA + +A+ LF +M+ + +P+ +T + +L AC + G LE+G
Sbjct: 494 -ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG 552
Query: 480 WGYFNLMTKV-YQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 538
+T+ +++N L+ + + D+ + G L+++ + + K DA W ++
Sbjct: 553 QMIHRYITETEHEMNLSLS--AALIDMYAKCGHLEKSRELFDAGNQK-DAVCWNVMISGY 609
Query: 539 KIHRNIE 545
+H ++E
Sbjct: 610 GMHGDVE 616
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 206/441 (46%), Gaps = 8/441 (1%)
Query: 80 IVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKV 139
I+ +IFV + ++ YA + + + ++F + RD+ WN++I G +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWIS 198
LC F++M L G D T + A + VH + H G D + +V +++
Sbjct: 110 LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY 169
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGF---R 255
Y+KC L+ A LVF + + R VV+W +II G + + L + M G +
Sbjct: 170 FYSKCGFLQDACLVFDEMPD--RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDK 227
Query: 256 PDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFL 315
P+ T+ +C AL +GR +H + G V +++ S YSK G+ A
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 316 FDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGAL 375
F + D SWT++I+ A+ GD++E+ +F+ M+ G PD V + +I+ G+ +
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLV 347
Query: 376 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAG 434
GK F + + VCN+L+ MY K + A +LF + E+ +W TM+ G
Sbjct: 348 PQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG 407
Query: 435 CALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNP 494
V+ ++LF ++ L + + + +V+ +C+H G + G + K ++
Sbjct: 408 YGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT-SLDL 466
Query: 495 ELNHYSCMADLLGRKGKLKEA 515
++ + + DL G+ G L A
Sbjct: 467 TISVVNSLIDLYGKMGDLTVA 487
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 171 LSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSII 230
L L+ ++ I G+ ++ V + IS+YA ++ VF + R + WNSII
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTR--RDIFLWNSII 97
Query: 231 GGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGI-HYGF 289
+ SL F+ M+ G PD T ++S+C G VH + H GF
Sbjct: 98 KAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGF 157
Query: 290 DLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFA 349
D + +V + + YSKCG + A +FD M DR V+WTA+ISG+ Q G+ + L
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 350 MEAAG---EVPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 406
M +AG + P+ T+ C GAL+ G+ +A GL + V +++ YSK
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 407 CGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRV 461
G+ +A F L ++ + SWT++IA A +G+ E+ D+F +M + P+ V
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 20/242 (8%)
Query: 357 PDLVTVLSMISG--------------CGQSGALELGKWFDNYACSGGLKDNVMVCNALID 402
P+LV L +S C QS +LE + + +GGL +N+ V + LI
Sbjct: 8 PNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLIS 67
Query: 403 MYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVT 462
Y+ G + +F+ + + + W ++I NG++ +L F M+ P+ T
Sbjct: 68 SYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFT 127
Query: 463 FLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSM 522
V+ AC + G L+ K + + + G L++A M
Sbjct: 128 APMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEM 187
Query: 523 PIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVA 582
P + D W + I +++ GE + + HSA V+ N L + +
Sbjct: 188 PDR-DVVAWTAI-----ISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACS 241
Query: 583 NL 584
NL
Sbjct: 242 NL 243
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 322 bits (825), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 267/496 (53%), Gaps = 6/496 (1%)
Query: 123 WNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 182
WN + A + + L+ +M G D + + ++ LSL S
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSC---ASLSLPVSGQQLHC 77
Query: 183 HI---GVDADVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKF 239
H+ G + + V IS Y KC + A VF + + V +N++I G T K
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 240 DDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 299
D+ +R M G D T++ L+ C PE L GR +H + G D +V+V+N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 300 ISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDL 359
I+MY KCG +++ R LFD M + ++W A+ISGY+Q G + L L+ M+++G PD
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 360 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 419
T++S++S C GA ++G S G NV V NA I MY++CG++ AR +F
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 420 LPEKTVVSWTTMIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKG 479
+P K++VSWT MI ++G L LF M++ +RP+ F+ VL AC+H+G +KG
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 480 WGYFNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 539
F M + Y++ P HYSC+ DLLGR G+L EA++F++SMP++ D +WG LL ACK
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 540 IHRNIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQ 599
IH+N+++ E ++ E EP++ YV M+NIY+ +G+ +R MM+ +K PG
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 600 SLVHINGKTCTFTVED 615
S V G+ F D
Sbjct: 498 SYVEHKGRVHLFLAGD 513
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 232/474 (48%), Gaps = 27/474 (5%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
WN ++RE ++ +++ L+R M ++ P+ +FPFI K+CA LS + Q +H H+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVAS--WNAMIVGFAQMGFLEKV 139
K ++ FV T ++ MY KC + A K+F++ P S +NA+I G+ +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 140 LCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISA 199
+F M+ G+ D VT++GL ++L L +S+H + G+D++V+V N++I+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 200 YAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVT 259
Y KC ++ +F E ++ +++WN++I G + D L Y M G PD
Sbjct: 201 YMKCGSVEAGRRLFD--EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 260 TVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGM 319
T+VS+LSSC A G V GF +V V N ISMY++CG++ AR +FD M
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 320 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
++ VSWTAMI Y G + L LF M G PD + ++S C SG + G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKTVVSWTTMIAGCAL 437
+ F L+ + L+D+ + G + +A E ++P E W ++ C +
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQ 491
+ A F +++E + PN + GY+ LM+ +Y
Sbjct: 439 HKNVDMAELAFAKVIEFE--PNNI-------------------GYYVLMSNIYS 471
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 291/529 (55%), Gaps = 6/529 (1%)
Query: 90 FVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLV 149
+ T ++ Y + ++ A LFD+MPDRDV +W AMI G+A + + F+ M
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 150 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYAKCN-DLKM 208
G + T+ + ++ + K L+ VH + +G++ + V N ++ YA C+ ++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 209 AELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSC 268
A L+FR I+ ++ V+W ++I G T+ L Y+ M+ + + + +
Sbjct: 166 ACLIFRDIK--VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 269 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWT 328
+++ G+ +H+ I GF ++ V+N+++ +Y +CG + A+ F M D+ ++W
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 329 AMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKWFDNYACSG 388
+IS ++ D EAL +F E+ G VP+ T S+++ C AL G+
Sbjct: 284 TLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 389 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-TVVSWTTMIAGCALNGEFVEALDL 447
G NV + NALIDMY+KCG+I D++ +F + ++ +VSWT+M+ G +G EA++L
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 448 FHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELNHYSCMADLLG 507
F +M+ +RP+R+ F+AVL AC HAG +EKG YFN+M Y +NP+ + Y+C+ DLLG
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 508 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR-NIEIGEYVAYRLFELEPHSAAPYV 566
R GK+ EA + V+ MP K D WG +L ACK H+ N I A ++ EL+P YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 567 EMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVHINGKTCTFTVED 615
++ IYA G+W A +R MM+ KK G S + + + +F V D
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 203/418 (48%), Gaps = 7/418 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I N +A F M K PN T + K+C + Y ++HG +V
Sbjct: 79 WTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV 138
Query: 82 KSPFWSDIFVQTTMVDMYAKCD-RLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
K ++V M++MYA C ++ A +F + ++ +W +I GF +G L
Sbjct: 139 KLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 141 CLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAY 200
++ M L + + +A+ ++ K +H+ I G +++ V N+ + Y
Sbjct: 199 KMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY 258
Query: 201 AKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTT 260
+C L A+ F +E+ + +++WN++I D + L F R GF P+ T
Sbjct: 259 CRCGYLSEAKHYFHEMED--KDLITWNTLISELERSDSSEALLMFQR-FESQGFVPNCYT 315
Query: 261 VVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
SL+++C AL G+ +H GF+ +V + N LI MY+KCG+I ++ +F +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 321 DRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG- 378
DR VSWT+M+ GY G EA+ LF M ++G PD + ++++S C +G +E G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 379 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVS-WTTMIAGC 435
K+F+ G+ + + N ++D+ + G IG+A EL +P K S W ++ C
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 152/362 (41%), Gaps = 7/362 (1%)
Query: 22 WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHIV 81
W + I + L ++++M + E +A A + + IH ++
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240
Query: 82 KSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVLC 141
K F S++ V +++D+Y +C L A F +M D+D+ +WN +I + E +L
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALL- 299
Query: 142 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISAYA 201
+F G + T L A + L+ + +H G + +V + N I YA
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYA 359
Query: 202 KCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTV 261
KC ++ ++ VF I + R +VSW S++ G +++ + M+ G RPD
Sbjct: 360 KCGNIPDSQRVFGEIVD-RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVF 418
Query: 262 VSLLSSCVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDGMC 320
+++LS+C + +G + + YG + D + N ++ + + G I A L + M
Sbjct: 419 MAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 321 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELGKW 380
+ S I G + + + A + P +V M+S + GKW
Sbjct: 479 FKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAE----GKW 534
Query: 381 FD 382
D
Sbjct: 535 VD 536
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 391 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCALNGEFVEALDLFHQ 450
K +++ N ++ + K G + +AR LF +P++ VV+WT MI G A + A + FH+
Sbjct: 43 KHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 451 MMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTK------VYQVNPELNHYSCMAD 504
M++ PN T +VL++C + L G ++ K +Y N +N Y+ +
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 505 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHRNIEIGEYVAYRLFELEPHSAAP 564
++ A + + +K+D W TL+ H IG Y+ LE P
Sbjct: 162 ------TMEAACLIFRDIKVKNDV-TWTTLITGF-THLGDGIGGLKMYKQMLLENAEVTP 213
Query: 565 Y 565
Y
Sbjct: 214 Y 214
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 310/589 (52%), Gaps = 15/589 (2%)
Query: 21 QWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNLTFPFIAKACAKLSDFLYSQMIHGHI 80
WN + +D + L F +++ EPN T + AC L + + IHG++
Sbjct: 115 SWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYV 172
Query: 81 VKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGFLEKVL 140
++S F VQ +++ MYA D L A KLFD+M +RDV SW+ +I + Q L
Sbjct: 173 IRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGL 231
Query: 141 CLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 198
LF M + D VTV + +A + + + +SVH F I G D ADV VCN+ I
Sbjct: 232 KLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLID 291
Query: 199 AYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYDGFRPDV 258
Y+K D+ A VF E R +VSWNSI+ G + ++D++L + M+ + D
Sbjct: 292 MYSKGFDVDSAFRVFD--ETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDE 349
Query: 259 TTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARFLFDG 318
TVVSLL C E + + +H I G++ + +++LI Y+ C +D A + D
Sbjct: 350 VTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDS 409
Query: 319 MCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCGQSGALELG 378
M + VS + MISG A G DEA+ +F M + P+ +TV+S+++ C S L
Sbjct: 410 MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTS 466
Query: 379 KWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTTMIAGCAL 437
KW A L N + V +++D Y+KCG+I AR F + EK ++SWT +I+ A+
Sbjct: 467 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 526
Query: 438 NGEFVEALDLFHQMMELDLRPNRVTFLAVLQACTHAGFLEKGWGYFNLMTKVYQVNPELN 497
NG +AL LF +M + PN VT+LA L AC H G ++KG F M + P L
Sbjct: 527 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQ 585
Query: 498 HYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIH-RNIEIGEYVAYRL 554
HYSC+ D+L R G++ A++ ++++P +K+ A WG +L C+ + + I V +
Sbjct: 586 HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEV 645
Query: 555 FELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLVH 603
ELEP ++ Y+ ++ +A W+ VA +R ++K +V+ G S+V
Sbjct: 646 LELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVR 694
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 235/484 (48%), Gaps = 18/484 (3%)
Query: 17 STINQWNSQIREAVDKNEAHKALLLFRRMKKNDIEPNN-LTFPFIAKACAKLSDFLYSQM 75
S + +S+I++A + + + + +++ ++ N+ FP + KACAKLS +
Sbjct: 9 SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRC 68
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKMPDRDVASWNAMIVGFAQMGF 135
I ++K F S + V ++ D Y KC L + FD M RD SWN ++ G GF
Sbjct: 69 IQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGF 128
Query: 136 LEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL---KSVHSFGIHIGVDADVSV 192
E+ L F +R+ G + + T++ IHA SL + +H + I G SV
Sbjct: 129 EEEGLWWFSKLRVWGFEPNTSTLV----LVIHACR-SLWFDGEKIHGYVIRSGFCGISSV 183
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
N+ + YA + L +L F + E R V+SW+ +I + L ++ M+++
Sbjct: 184 QNSILCMYADSDSLSARKL-FDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHE 240
Query: 253 G-FRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDID 310
PD TV S+L +C E + GR VH I GFDL DV V N+LI MYSK D+D
Sbjct: 241 AKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVD 300
Query: 311 SARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLSMISGCG 370
SA +FD R VSW ++++G+ DEAL +F M D VTV+S++ C
Sbjct: 301 SAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCK 360
Query: 371 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKTVVSWTT 430
K G + N + ++LID Y+ C + DA + ++ K VVS +T
Sbjct: 361 FFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCST 420
Query: 431 MIAGCALNGEFVEALDLFHQMMELDLRPNRVTFLAVLQACT-HAGFLEKGWGYFNLMTKV 489
MI+G A G EA+ +F M + PN +T +++L AC+ A W + + +
Sbjct: 421 MISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRS 477
Query: 490 YQVN 493
+N
Sbjct: 478 LAIN 481
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 287/541 (53%), Gaps = 16/541 (2%)
Query: 76 IHGHIVKSPFWSDIFVQTTMVDMYAKCDR---LDCAYKLFDKMPDRDVASWNAMIVGFAQ 132
+HG ++KS ++ + ++D C L A +F+ + V WN+MI G++
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 133 MGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 192
+K L + M G D+ T + +A + + VH F + G + ++ V
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYV 144
Query: 193 CNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWNSIIGGCTYGDKFDDSLNFYRHMIYD 252
+ Y C ++ VF I + VV+W S+I G ++F D++ +R M +
Sbjct: 145 STCLLHMYMCCGEVNYGLRVFEDIPQW--NVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 253 GFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHYGFD--------LDVSVINTLISMYS 304
G + + T +V LL +C + +V G+ H GFD +V + +LI MY+
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 305 KCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEVPDLVTVLS 364
KCGD+ +AR+LFDGM +RT VSW ++I+GY+Q GD +EAL +F M G PD VT LS
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 365 MISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 423
+I G +LG+ Y G +KD +VC AL++MY+K G A++ F L +K
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC-ALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 424 TVVSWTTMIAGCALNGEFVEALDLFHQMMEL-DLRPNRVTFLAVLQACTHAGFLEKGWGY 482
++WT +I G A +G EAL +F +M E + P+ +T+L VL AC+H G +E+G Y
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 483 FNLMTKVYQVNPELNHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHR 542
F M ++ + P + HY CM D+L R G+ +EA V++MP+K + IWG LL C IH
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 543 NIEIGEYVAYRLFELEPHSAAPYVEMANIYALGGRWDGVANLRTMMKRNQVKKFPGQSLV 602
N+E+ + + + E E + YV ++NIYA GRW V +R MK +V K G S V
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Query: 603 H 603
Sbjct: 562 E 562
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 232/468 (49%), Gaps = 22/468 (4%)
Query: 4 SSLPPRLNKIYRSSTINQ--------WNSQIREAVDKNEAHKALLLFRRMKKNDIEPNNL 55
++ P +N Y S WNS IR + KAL+ ++ M + P+
Sbjct: 49 TTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYF 108
Query: 56 TFPFIAKACAKLSDFLYSQMIHGHIVKSPFWSDIFVQTTMVDMYAKCDRLDCAYKLFDKM 115
TFP++ KAC+ L D + +HG +VK+ F +++V T ++ MY C ++ ++F+ +
Sbjct: 109 TFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 116 PDRDVASWNAMIVGFAQMGFLEKVLCLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 175
P +V +W ++I GF + F M+ G++A+ ++ L A K + K
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 176 SVHSFGIHIGVDA--------DVSVCNTWISAYAKCNDLKMAELVFRGIEEGLRTVVSWN 227
H F +G D +V + + I YAKC DL+ A +F G+ E RT+VSWN
Sbjct: 229 WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPE--RTLVSWN 286
Query: 228 SIIGGCTYGDKFDDSLNFYRHMIYDGFRPDVTTVVSLLSSCVCPEALVQGRLVHSHGIHY 287
SII G + +++L + M+ G PD T +S++ + + G+ +H++
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 288 GFDLDVSVINTLISMYSKCGDIDSARFLFDGMCDRTRVSWTAMISGYAQKGDLDEALRLF 347
GF D +++ L++MY+K GD +SA+ F+ + + ++WT +I G A G +EAL +F
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 348 FAMEAAGE-VPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYS 405
M+ G PD +T L ++ C G +E G ++F GL+ V ++D+ S
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 406 KCGSIGDARELFYALPEKTVVS-WTTMIAGCALNGEFVEALDLFHQMM 452
+ G +A L +P K V+ W ++ GC ++ E +E D M+
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH-ENLELTDRIRSMV 513
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,747,706
Number of Sequences: 539616
Number of extensions: 8975317
Number of successful extensions: 32050
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 23803
Number of HSP's gapped (non-prelim): 2404
length of query: 615
length of database: 191,569,459
effective HSP length: 124
effective length of query: 491
effective length of database: 124,657,075
effective search space: 61206623825
effective search space used: 61206623825
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)