Query 036662
Match_columns 316
No_of_seqs 324 out of 4705
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 06:35:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 8.3E-40 2.8E-44 283.8 18.2 205 1-220 9-267 (282)
2 2dzn_A Probable 26S proteasome 100.0 2.5E-38 8.7E-43 266.3 21.3 203 1-220 2-217 (228)
3 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-39 8.2E-44 277.5 13.5 210 1-227 10-239 (253)
4 2xai_A ASB-9, ankyrin repeat a 100.0 3.2E-38 1.1E-42 271.8 20.4 199 1-220 3-208 (261)
5 3b7b_A Euchromatic histone-lys 100.0 4.4E-38 1.5E-42 266.5 20.3 203 1-221 11-220 (237)
6 3aji_A 26S proteasome non-ATPa 100.0 9.9E-38 3.4E-42 263.3 20.7 201 2-220 7-214 (231)
7 2rfa_A Transient receptor pote 100.0 3.3E-38 1.1E-42 266.5 17.1 190 1-208 3-227 (232)
8 2f8y_A Notch homolog 1, transl 100.0 1.9E-37 6.4E-42 260.2 20.6 189 1-207 25-220 (223)
9 1k1a_A B-cell lymphoma 3-encod 100.0 8.5E-38 2.9E-42 265.1 18.6 204 1-222 9-227 (241)
10 3d9h_A CDNA FLJ77766, highly s 100.0 4.1E-37 1.4E-41 268.4 20.5 198 1-219 59-263 (285)
11 4b93_B Ankyrin repeat domain-c 100.0 3.7E-37 1.3E-41 266.4 18.8 202 3-220 13-227 (269)
12 3hra_A Ankyrin repeat family p 100.0 6.6E-37 2.2E-41 252.8 18.1 182 2-201 6-201 (201)
13 3aji_A 26S proteasome non-ATPa 100.0 3.7E-37 1.3E-41 259.7 16.5 184 1-203 40-230 (231)
14 1wdy_A 2-5A-dependent ribonucl 100.0 2.1E-36 7E-41 262.3 21.2 202 2-222 40-264 (285)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-36 4.4E-41 260.5 19.2 186 1-204 57-249 (253)
16 4g8k_A 2-5A-dependent ribonucl 100.0 1.7E-36 5.7E-41 270.4 19.1 195 2-206 26-301 (337)
17 3utm_A Tankyrase-1; tankyrase, 100.0 2.6E-36 8.9E-41 269.5 20.1 199 1-218 58-320 (351)
18 1ikn_D Protein (I-kappa-B-alph 100.0 8.7E-38 3E-42 264.8 9.2 192 1-207 8-213 (236)
19 4gpm_A Engineered protein OR26 100.0 5.7E-36 2E-40 240.8 17.7 160 2-206 5-164 (169)
20 2etb_A Transient receptor pote 100.0 3.3E-37 1.1E-41 264.4 11.0 192 1-207 2-250 (256)
21 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-35 4.2E-40 273.9 20.7 211 2-224 147-390 (437)
22 1s70_B 130 kDa myosin-binding 100.0 4.9E-36 1.7E-40 262.6 16.1 203 2-220 41-274 (299)
23 2pnn_A Transient receptor pote 100.0 1.1E-36 3.8E-41 263.7 11.4 193 1-208 13-264 (273)
24 3ljn_A Hypothetical protein; a 100.0 5.1E-36 1.8E-40 270.0 16.0 204 2-225 21-258 (364)
25 3kea_A K1L; tropism, ANK repea 100.0 3.2E-36 1.1E-40 262.7 13.7 185 1-208 31-225 (285)
26 3eu9_A Huntingtin-interacting 100.0 4.7E-35 1.6E-39 247.6 19.1 203 2-222 10-221 (240)
27 1k1a_A B-cell lymphoma 3-encod 100.0 8E-36 2.7E-40 252.9 14.3 183 1-202 46-240 (241)
28 2fo1_E LIN-12 protein; beta-ba 100.0 2.2E-36 7.4E-41 273.7 10.6 203 1-222 125-357 (373)
29 1wdy_A 2-5A-dependent ribonucl 100.0 5.8E-35 2E-39 253.1 18.9 208 2-223 6-231 (285)
30 4b93_B Ankyrin repeat domain-c 100.0 2.8E-36 9.5E-41 260.9 9.8 184 2-204 53-245 (269)
31 2dzn_A Probable 26S proteasome 100.0 4.1E-35 1.4E-39 246.6 16.2 180 1-199 36-226 (228)
32 2xai_A ASB-9, ankyrin repeat a 100.0 3.5E-35 1.2E-39 252.8 16.0 182 1-205 36-224 (261)
33 3jxi_A Vanilloid receptor-rela 100.0 5.6E-36 1.9E-40 257.2 10.1 192 2-208 6-255 (260)
34 1n11_A Ankyrin; clathrin, BAND 100.0 7.9E-35 2.7E-39 268.4 18.4 196 1-215 14-216 (437)
35 2f8y_A Notch homolog 1, transl 100.0 1E-35 3.6E-40 249.5 11.2 197 11-224 1-204 (223)
36 3d9h_A CDNA FLJ77766, highly s 100.0 9E-35 3.1E-39 253.5 15.6 204 1-222 15-233 (285)
37 3b7b_A Euchromatic histone-lys 100.0 3.5E-34 1.2E-38 242.5 18.4 180 1-198 44-230 (237)
38 2fo1_E LIN-12 protein; beta-ba 100.0 7.9E-35 2.7E-39 263.4 15.2 185 1-204 166-372 (373)
39 3utm_A Tankyrase-1; tankyrase, 100.0 3.2E-34 1.1E-38 255.9 18.1 208 2-225 25-294 (351)
40 4g8k_A 2-5A-dependent ribonucl 100.0 7.2E-34 2.5E-38 253.4 19.5 198 1-206 59-329 (337)
41 3ljn_A Hypothetical protein; a 100.0 2E-34 6.7E-39 259.7 16.0 188 1-206 53-272 (364)
42 3eu9_A Huntingtin-interacting 100.0 7.3E-34 2.5E-38 240.2 17.1 187 1-205 42-237 (240)
43 1oy3_D Transcription factor in 100.0 3E-34 1E-38 248.7 14.3 169 1-183 45-267 (282)
44 1s70_B 130 kDa myosin-binding 100.0 3.6E-34 1.2E-38 250.7 12.3 182 1-201 73-287 (299)
45 4hbd_A KN motif and ankyrin re 100.0 3.7E-34 1.3E-38 248.5 11.3 189 2-202 77-274 (276)
46 3v30_A DNA-binding protein rfx 100.0 5E-33 1.7E-37 224.0 15.5 150 2-165 3-152 (172)
47 1sw6_A Regulatory protein SWI6 100.0 1.2E-33 4.3E-38 251.1 12.9 196 4-219 100-324 (327)
48 1ihb_A P18-INK4C(INK6), cyclin 100.0 9.7E-33 3.3E-37 220.0 14.6 157 2-203 6-162 (162)
49 3v31_A Ankyrin repeat family A 100.0 3.1E-32 1.1E-36 218.3 14.8 148 1-163 3-150 (167)
50 2rfm_A Putative ankyrin repeat 100.0 1.5E-32 5.2E-37 225.3 12.9 155 31-201 29-190 (192)
51 1awc_B Protein (GA binding pro 100.0 2.4E-32 8.3E-37 215.9 13.6 148 2-165 3-150 (153)
52 2rfm_A Putative ankyrin repeat 100.0 3.7E-32 1.3E-36 222.9 14.0 150 1-165 35-184 (192)
53 2y1l_E Darpin-8.4; hydrolase-i 100.0 9.2E-32 3.1E-36 216.2 15.9 147 2-163 15-161 (169)
54 3v30_A DNA-binding protein rfx 100.0 2.6E-32 8.8E-37 219.9 12.2 162 37-213 2-170 (172)
55 3v31_A Ankyrin repeat family A 100.0 4.3E-32 1.5E-36 217.5 13.3 156 36-207 2-164 (167)
56 3kea_A K1L; tropism, ANK repea 100.0 3.6E-32 1.2E-36 237.1 12.6 190 9-220 7-204 (285)
57 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.8E-31 6.2E-36 214.5 14.0 152 34-201 11-169 (169)
58 2vge_A RELA-associated inhibit 100.0 6.4E-34 2.2E-38 240.3 -0.9 178 2-198 22-208 (229)
59 3f6q_A Integrin-linked protein 100.0 2.4E-31 8.2E-36 215.7 14.2 164 2-209 6-169 (179)
60 2rfa_A Transient receptor pote 100.0 3.8E-31 1.3E-35 223.1 15.8 172 36-223 2-209 (232)
61 1ikn_D Protein (I-kappa-B-alph 100.0 9.7E-32 3.3E-36 227.6 10.7 169 1-183 45-228 (236)
62 1bd8_A P19INK4D CDK4/6 inhibit 100.0 7.2E-31 2.5E-35 207.9 13.8 147 2-165 3-150 (156)
63 3twr_A Tankyrase-2; ankyrin re 100.0 2.4E-31 8.1E-36 212.7 10.4 142 2-157 9-150 (165)
64 3twr_A Tankyrase-2; ankyrin re 100.0 4.6E-31 1.6E-35 211.0 11.8 153 34-202 5-164 (165)
65 3f6q_A Integrin-linked protein 100.0 9.4E-31 3.2E-35 212.2 13.1 132 36-178 4-142 (179)
66 3hra_A Ankyrin repeat family p 100.0 3.7E-30 1.3E-34 212.2 16.5 174 34-219 2-186 (201)
67 2etb_A Transient receptor pote 100.0 3.9E-31 1.3E-35 226.5 10.7 154 1-165 43-238 (256)
68 4gpm_A Engineered protein OR26 100.0 2E-30 6.8E-35 208.4 13.6 130 39-180 6-142 (169)
69 1awc_B Protein (GA binding pro 100.0 2.5E-30 8.5E-35 204.3 13.3 144 37-197 2-152 (153)
70 1sw6_A Regulatory protein SWI6 100.0 2.6E-31 8.7E-36 236.2 8.1 161 1-183 131-325 (327)
71 2pnn_A Transient receptor pote 100.0 1.4E-30 4.8E-35 225.3 11.7 154 1-165 54-250 (273)
72 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.1E-30 1.4E-34 203.5 12.6 147 37-200 2-155 (156)
73 4hbd_A KN motif and ankyrin re 100.0 4.4E-30 1.5E-34 222.8 13.2 150 1-165 111-267 (276)
74 1ycs_B 53BP2, P53BP2; ankyrin 100.0 7.5E-31 2.6E-35 222.9 7.7 167 1-183 5-190 (239)
75 3jxi_A Vanilloid receptor-rela 100.0 1.9E-30 6.6E-35 222.6 9.3 154 1-165 46-242 (260)
76 3t8k_A Uncharacterized protein 100.0 3.4E-30 1.2E-34 210.3 8.2 153 3-165 8-171 (186)
77 2vge_A RELA-associated inhibit 100.0 4.4E-31 1.5E-35 222.9 1.1 192 17-227 1-204 (229)
78 1bi7_B P16INK4A, MTS1, multipl 100.0 2.5E-29 8.4E-34 199.4 9.3 139 1-155 12-151 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.3E-29 8E-34 213.6 5.5 157 34-207 2-168 (239)
80 1d9s_A Cyclin-dependent kinase 100.0 4E-28 1.4E-32 187.9 10.5 122 2-136 13-135 (136)
81 1d9s_A Cyclin-dependent kinase 100.0 3.1E-28 1.1E-32 188.5 9.8 130 31-203 6-136 (136)
82 3ui2_A Signal recognition part 99.9 1.5E-29 5.2E-34 215.5 1.8 145 34-205 42-187 (244)
83 2jab_A H10-2-G3; HER2, darpin, 99.9 2E-27 7E-32 183.9 12.7 122 2-135 15-136 (136)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 3.7E-28 1.3E-32 192.5 7.9 136 33-181 8-151 (156)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9.1E-27 3.1E-31 177.0 14.4 125 1-137 2-126 (126)
86 3deo_A Signal recognition part 99.9 2.7E-27 9.1E-32 192.7 11.6 140 34-200 41-181 (183)
87 3t8k_A Uncharacterized protein 99.9 4.4E-28 1.5E-32 197.8 5.4 155 37-204 6-180 (186)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.9E-26 9.8E-31 174.2 15.0 126 36-203 1-126 (126)
89 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.8E-26 6.2E-31 183.5 12.4 125 1-137 38-162 (162)
90 2aja_A Ankyrin repeat family p 99.9 5.2E-29 1.8E-33 224.5 -2.8 145 2-165 93-242 (376)
91 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-26 3.7E-31 179.7 10.0 119 34-164 11-129 (136)
92 3c5r_A BARD-1, BRCA1-associate 99.9 6.3E-27 2.1E-31 181.2 8.6 121 33-165 6-126 (137)
93 2b0o_E UPLC1; arfgap, structur 99.9 1.8E-26 6.2E-31 202.4 10.6 141 3-161 153-299 (301)
94 3aaa_C Myotrophin, protein V-1 99.9 1.3E-26 4.5E-31 176.1 8.3 117 34-162 4-120 (123)
95 3c5r_A BARD-1, BRCA1-associate 99.9 8.5E-26 2.9E-30 174.8 7.0 124 1-136 10-133 (137)
96 3aaa_C Myotrophin, protein V-1 99.9 2.1E-25 7.3E-30 169.3 9.1 115 1-127 7-121 (123)
97 3ehr_A Osteoclast-stimulating 99.9 1.2E-25 4.1E-30 188.4 8.2 121 34-165 70-190 (222)
98 2aja_A Ankyrin repeat family p 99.9 2.6E-27 8.8E-32 213.4 -2.4 178 4-207 68-254 (376)
99 3ehr_A Osteoclast-stimulating 99.9 1.2E-25 4.2E-30 188.3 6.8 125 2-138 74-199 (222)
100 3ui2_A Signal recognition part 99.9 2.5E-25 8.5E-30 189.4 8.0 131 2-165 46-177 (244)
101 3deo_A Signal recognition part 99.9 2.6E-25 8.8E-30 180.9 7.7 131 2-165 45-176 (183)
102 2b0o_E UPLC1; arfgap, structur 99.9 8.9E-25 3.1E-29 191.6 9.3 135 37-183 151-295 (301)
103 1dcq_A PYK2-associated protein 99.9 2.5E-24 8.5E-29 186.7 10.6 126 3-137 132-263 (278)
104 3jue_A Arfgap with coiled-coil 99.9 4.1E-24 1.4E-28 191.9 11.7 138 34-183 196-346 (368)
105 3lvq_E ARF-GAP with SH3 domain 99.9 7E-24 2.4E-28 198.6 13.3 137 3-157 134-276 (497)
106 3jue_A Arfgap with coiled-coil 99.9 8.6E-24 2.9E-28 189.8 10.4 146 2-159 200-348 (368)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.1E-23 1.1E-27 149.4 11.1 93 36-137 1-93 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.9 2E-23 7E-28 156.3 8.0 108 32-151 4-111 (115)
109 1dcq_A PYK2-associated protein 99.9 6.7E-22 2.3E-26 171.4 13.5 127 38-205 131-265 (278)
110 3lvq_E ARF-GAP with SH3 domain 99.9 3.5E-22 1.2E-26 187.1 11.5 135 37-183 132-276 (497)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.5E-21 5.1E-26 140.5 10.8 91 1-103 2-92 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.8 3.7E-21 1.2E-25 144.0 7.1 104 1-116 9-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 1.1E-19 3.6E-24 135.0 8.9 91 32-131 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 4.5E-19 1.5E-23 131.6 6.5 91 64-165 17-107 (110)
115 3mkq_B Coatomer subunit alpha; 53.4 47 0.0016 25.6 7.0 106 2-135 9-116 (177)
116 1gp8_A Protein (scaffolding pr 41.0 18 0.00062 20.0 2.0 18 5-22 17-34 (40)
117 3zrh_A Ubiquitin thioesterase 30.9 97 0.0033 27.4 6.0 54 6-59 27-91 (454)
118 3arc_L Photosystem II reaction 23.2 98 0.0034 16.7 3.8 23 287-309 14-36 (37)
119 3zrh_A Ubiquitin thioesterase 20.8 4.4E+02 0.015 23.3 8.5 64 42-133 27-90 (454)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.3e-40 Score=283.82 Aligned_cols=205 Identities=22% Similarity=0.175 Sum_probs=178.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||+|++.|+.++|++|++.+++....+.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACR 87 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 579999999999999999999998874444667899999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCC----------------------------------------------CcccccCCCCc
Q 036662 81 KRYVGMKSNRIDVLEELVRARPL----------------------------------------------AASAPLIWVET 114 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~----------------------------------------------~~~~~d~~g~t 114 (316)
.|+.++ +++|++..+. .++.+|..|+|
T Consensus 88 ~~~~~~-------v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 88 VRAHTC-------ACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp TTCHHH-------HHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred cCCcch-------hHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 999888 9999983322 26677889999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCccccccccCC-CCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccC
Q 036662 115 ILHLCVKHNQLEALKVLLENTDDSEFLNAKDDY-GMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKR 186 (316)
Q Consensus 115 ~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~-g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~ 186 (316)
|||+|+..|+.+++++|+++|++ ++.++.. |+||||+|+..|+.++++ +++.+|..|+||||+|+.
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~--- 234 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGAD---LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL--- 234 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHH---
Confidence 99999999999999999999999 9998864 999999999999999998 899999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCcccccCCcccccccccc
Q 036662 187 KMKDWEIGELLRRAGAISAKEMQQPATKVSITQT 220 (316)
Q Consensus 187 ~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~ 220 (316)
.++.+++++|+++|++++.....+.+|......
T Consensus 235 -~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 235 -RPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp -SSCHHHHHHHHHTTCCCCCCC------------
T ss_pred -cCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 899999999999999999998888888765544
No 2
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.5e-38 Score=266.27 Aligned_cols=203 Identities=18% Similarity=0.177 Sum_probs=186.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhC--CCcccccCCCCCcHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQK--PGIAGELDSRKSSALHIA 78 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~~d~~g~tpLh~A 78 (316)
++||||.|++.|+.++++.|++++++... .+|..|.||||+|+..|+.+++++|+++| +++....|..|.||||+|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLL--QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccc--cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 48999999999999999999999987643 25889999999999999999999999999 666333889999999999
Q ss_pred HHcCCcccccccHHHHHHHHHhCC--CCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHH
Q 036662 79 SQKRYVGMKSNRIDVLEELVRARP--LAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAV 156 (316)
Q Consensus 79 ~~~g~~~~~~~~~~iv~~Ll~~~~--~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~ 156 (316)
+..|+.++ +++|++ .+ .+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+
T Consensus 80 ~~~~~~~~-------~~~Ll~-~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~ 148 (228)
T 2dzn_A 80 CSVGNLEV-------VKSLYD-RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS---VRIKDKFNQIPLHRAA 148 (228)
T ss_dssp HHHCCHHH-------HHHHHS-SSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHH
T ss_pred HHcCCHHH-------HHHHHh-CCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC---ccccCCCCCCHHHHHH
Confidence 99999888 999999 55 78889999999999999999999999999999999 9999999999999999
Q ss_pred hcCCcceec--------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHH-HhCCCcccccCCcccccccccc
Q 036662 157 ADKQIEYYN--------QSECCYANGFTAWDILANSKRKMKDWEIGELLR-RAGAISAKEMQQPATKVSITQT 220 (316)
Q Consensus 157 ~~~~~~~v~--------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll-~~ga~~~~~~~~~~~~~~~~~~ 220 (316)
..|+.++++ +++.+|..|+||||+|+. .++.+++++|+ ++|++.+.....+.++.+....
T Consensus 149 ~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 149 SVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA----EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred HcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHH----cCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 999999998 688899999999999999 89999999999 9999999999888888876644
No 3
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.4e-39 Score=277.53 Aligned_cols=210 Identities=22% Similarity=0.185 Sum_probs=167.8
Q ss_pred CCcHHHHHHHcC-------------CHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCccccc
Q 036662 1 MESKLYEAALAG-------------SVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGEL 67 (316)
Q Consensus 1 m~t~L~~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 67 (316)
+.||||.|+..| +.++++.|+++++++... .|..|.||||+|+..|+.+++++|+++|+++ +.+
T Consensus 10 g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~ 86 (253)
T 1yyh_A 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQ--TDRTGETALHLAARYSRSDAAKRLLEASADA-NIQ 86 (253)
T ss_dssp ------------------------------------------C--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCC
T ss_pred CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCC
Confidence 479999999988 899999999999987432 4889999999999999999999999999998 889
Q ss_pred CCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCC
Q 036662 68 DSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDY 147 (316)
Q Consensus 68 d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~ 147 (316)
|..|+||||+|+..|+.++ +++|++..+.+++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|.+
T Consensus 87 ~~~g~t~L~~A~~~~~~~~-------v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~ 156 (253)
T 1yyh_A 87 DNMGRTPLHAAVSADAQGV-------FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD---VNAVDDL 156 (253)
T ss_dssp CTTSCCHHHHHHHHTCHHH-------HHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC---TTCBCTT
T ss_pred CCCCCCHHHHHHHcCCHHH-------HHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC---CCCcCCC
Confidence 9999999999999999988 99999966668999999999999999999999999999999999 9999999
Q ss_pred CCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCcccccccccc
Q 036662 148 GMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQT 220 (316)
Q Consensus 148 g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~ 220 (316)
|+||||+|+..|+.++++ +++.+|..|.||||+|+. .++.+++++|+++|++.+.....+.++.+.+..
T Consensus 157 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 232 (253)
T 1yyh_A 157 GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAR----EGSYETAKVLLDHFANRDITDHMDRLPRDIAQE 232 (253)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH----CCCHHHHHHHHHcCCCccccccCCCCHHHHHHH
Confidence 999999999999999998 899999999999999999 889999999999999999988888888887766
Q ss_pred Ccccccc
Q 036662 221 NSLTSHG 227 (316)
Q Consensus 221 ~~~~~~~ 227 (316)
+.....+
T Consensus 233 ~g~~~i~ 239 (253)
T 1yyh_A 233 RMHHDIV 239 (253)
T ss_dssp TTCHHHH
T ss_pred cCCHHHH
Confidence 6555444
No 4
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=271.80 Aligned_cols=199 Identities=17% Similarity=0.146 Sum_probs=184.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.++++.|++++.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAV---NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACV 78 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCS---SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 479999999999999999999999877 455899999999999999999999999999998 8999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++. +.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+
T Consensus 79 ~~~~~~-------v~~Ll~-~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 79 SGSWDC-------VNLLLQ-HGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN---IDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp HTCHHH-------HHHHHH-TTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCBTTTBCHHHHHHHTTC
T ss_pred cCCHHH-------HHHHHH-CCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCC---CCcCCCCCCCHHHHHHHhCC
Confidence 999988 999999 7777765 56799999999999999999999999999 99999999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCcccccccccc
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQT 220 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~ 220 (316)
.++++ +++. |..|.||||+|+. .++.+++++|+++|++.+.....+.+|.+....
T Consensus 147 ~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~----~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 147 RACVKKLLESGADVNQ-GKGQDSPLHAVAR----TASEELACLLMDFGADTQAKNAEGKRPVELVPP 208 (261)
T ss_dssp HHHHHHHHHHTCCTTC-CBTTBCHHHHHHH----HTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred HHHHHHHHHcCCCCCC-CCCCCChHHHHHH----cCCHHHHHHHHHcCCCCCCcCCCCCChhhhccc
Confidence 99998 6774 8899999999999 789999999999999999999999999877653
No 5
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.4e-38 Score=266.50 Aligned_cols=203 Identities=19% Similarity=0.168 Sum_probs=189.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 86 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANI---DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAK 86 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCc---CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHH
Confidence 479999999999999999999999887 445889999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++..+.+++..|..|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..|+
T Consensus 87 ~~~~~~-------~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 87 KGHYEV-------VQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD---INIRDNEENICLHWAAFSGC 156 (237)
T ss_dssp TTCHHH-------HHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHCC
T ss_pred cCCHHH-------HHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCccCCCCCCHHHHHHHCCC
Confidence 999988 99999966689999999999999999999999999999999999 99999999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCccccccccccC
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQTN 221 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 221 (316)
.++++ +++.+|..|.||||+|+. .++.+++++|+++|++.+.....+.+|.......
T Consensus 157 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 220 (237)
T 3b7b_A 157 VDIAEILLAAKCDLHAVNIHGDSPLHIAAR----ENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLN 220 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH----hCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHH
Confidence 99998 889999999999999999 8999999999999999998888888887665443
No 6
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.9e-38 Score=263.29 Aligned_cols=201 Identities=21% Similarity=0.238 Sum_probs=188.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
++|||.|++.|+.+.++.|++.++... +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 83 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLA--TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASA 83 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGG--GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhh--hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHc
Confidence 689999999999999999999987643 346889999999999999999999999999998 88999999999999999
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQI 161 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 161 (316)
|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.
T Consensus 84 ~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 84 GXDEI-------VKALLV-KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN---PDAKDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHH-------HHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHcCCH
Confidence 99988 999999 8889999999999999999999999999999999999 999999999999999999999
Q ss_pred ceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCcccccccccc
Q 036662 162 EYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQT 220 (316)
Q Consensus 162 ~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~ 220 (316)
++++ +++.+|..|.||||+|+. .++.+++++|+++|++.+.....+.+|...+..
T Consensus 153 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 153 KMVHILLFYKASTNIQDTEGNTPLHLACD----EERVEEAKFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred HHHHHHHhcCCCccccCCCCCCHHHHHHH----CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 9998 889999999999999999 899999999999999999888888888766543
No 7
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.3e-38 Score=266.49 Aligned_cols=190 Identities=23% Similarity=0.262 Sum_probs=170.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHc-ChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcc----cccCCCCCcHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQK-DRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIA----GELDSRKSSAL 75 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~----~~~d~~g~tpL 75 (316)
++||||.|++.|+.++++.|++. +.++ +.+|..|+||||+|+..|+.+++++|+++|+++. +..|..|.|||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEV---HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCc---ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 58999999999999999999998 8776 4458999999999999999999999999999863 45678999999
Q ss_pred HHHHHcCCcccccccHHHHHHHHHhCCCCcccccC-------------CCCcHHHHHHhcCCHHHHHHHHhcCCCccccc
Q 036662 76 HIASQKRYVGMKSNRIDVLEELVRARPLAASAPLI-------------WVETILHLCVKHNQLEALKVLLENTDDSEFLN 142 (316)
Q Consensus 76 h~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~-------------~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~ 142 (316)
|+|+..|+.++ +++|++ .+.+++..+. .|+||||+|+..|+.+++++|+++|++ ++
T Consensus 80 ~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~ 148 (232)
T 2rfa_A 80 HIAVINQNVNL-------VRALLA-RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD---IR 148 (232)
T ss_dssp HHHHHTTCHHH-------HHHHHH-TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC---TT
T ss_pred HHHHHcCCHHH-------HHHHHh-CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC---CC
Confidence 99999999988 999999 7888877765 799999999999999999999999999 99
Q ss_pred cccCCCCcHHHHHHhcCCccee----c-------cc------ccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcc
Q 036662 143 AKDDYGMSILHLAVADKQIEYY----N-------QS------ECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISA 205 (316)
Q Consensus 143 ~~d~~g~t~Lh~A~~~~~~~~v----~-------~~------~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~ 205 (316)
.+|.+|+||||+|+..++.+++ + +. +.+|..|+||||+|+. .++.+++++|+++|+...
T Consensus 149 ~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~----~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGV----EGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHH----HTCHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHH----cCCHHHHHHHHhcCccch
Confidence 9999999999999999999887 4 33 6899999999999999 899999999999998876
Q ss_pred ccc
Q 036662 206 KEM 208 (316)
Q Consensus 206 ~~~ 208 (316)
...
T Consensus 225 ~~~ 227 (232)
T 2rfa_A 225 AAH 227 (232)
T ss_dssp ---
T ss_pred hhh
Confidence 543
No 8
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.9e-37 Score=260.19 Aligned_cols=189 Identities=19% Similarity=0.165 Sum_probs=177.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+.+++++|+++++...+..|..|.||||+|+.
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADA---NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 479999999999999999999999887 44589999999999999999999999999985458899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+
T Consensus 102 ~~~~~~-------~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 102 LAVEGM-------LEDLIN-SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN---KDMQNNREETPLFLAAREGS 170 (223)
T ss_dssp HTCHHH-------HHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHHTC
T ss_pred hCcHHH-------HHHHHH-cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCcCHHHHHHHcCC
Confidence 999988 999999 8889999999999999999999999999999999999 99999999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccc
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKE 207 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~ 207 (316)
.++++ +++.+|..|.||+++|+. .++.+++++|+++|+...++
T Consensus 171 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~----~~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 171 YETAKVLLDHFANRDITDHMDRLPRDIAQE----RMHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCSSCC-
T ss_pred HHHHHHHHHcCCCCccccccCCCHHHHHHH----hcchHHHHHHHHcCCCcccc
Confidence 99998 889999999999999999 89999999999999987654
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=8.5e-38 Score=265.12 Aligned_cols=204 Identities=22% Similarity=0.238 Sum_probs=186.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHH----cChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQ----KDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALH 76 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 76 (316)
++||||.|++.|+.+++++|++ .+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~ 84 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGREL---DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAH 84 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC---CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHH
Confidence 4799999999999999999997 56555 445889999999999999999999999999998 888999999999
Q ss_pred HHHHcCCcccccccHHHHHHHHHhCC---CCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCcccccccc-CCCCcHH
Q 036662 77 IASQKRYVGMKSNRIDVLEELVRARP---LAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKD-DYGMSIL 152 (316)
Q Consensus 77 ~A~~~g~~~~~~~~~~iv~~Ll~~~~---~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d-~~g~t~L 152 (316)
+|+..|+.++ +++|++..+ .+++..|..|+||||+|+..|+.+++++|++.|++ ++.+| ..|+|||
T Consensus 85 ~A~~~~~~~~-------~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~g~t~L 154 (241)
T 1k1a_A 85 LACEHRSPTC-------LRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD---IDAVDIKSGRSPL 154 (241)
T ss_dssp HHHHTTCHHH-------HHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTTCCCHH
T ss_pred HHHHcCCHHH-------HHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC---cccccccCCCcHH
Confidence 9999999988 999999543 27788899999999999999999999999999999 89888 8999999
Q ss_pred HHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCccccccccccCc
Q 036662 153 HLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQTNS 222 (316)
Q Consensus 153 h~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 222 (316)
|+|+..|+.++++ +++.+|..|.||||+|+. .++.+++++|+++|++++.....+.+|...+..+.
T Consensus 155 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 155 IHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG----RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH----HTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcC
Confidence 9999999999998 899999999999999999 88999999999999999988888888887665543
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=268.40 Aligned_cols=198 Identities=16% Similarity=0.143 Sum_probs=184.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+.||||.|+..|+.++|+.|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWAV---NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACV 134 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCS---CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 469999999999999999999999887 445899999999999999999999999999998 8999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++. +.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+
T Consensus 135 ~~~~~~-------v~~Ll~-~g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 135 SGSWDC-------VNLLLQ-HGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN---IDHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp HTCHHH-------HHHHHH-TTCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCC---TTCCBTTTBCHHHHHHHTTC
T ss_pred cCHHHH-------HHHHHH-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHcCc
Confidence 999988 999999 7777765 45699999999999999999999999999 99999999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCccccccccc
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQ 219 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~ 219 (316)
.++++ +++ .|..|.||||+|+. .++.+++++|+++|++.+.....+.++..+..
T Consensus 203 ~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 203 RACVKKLLESGADVN-QGKGQDSPLHAVVR----TASEELACLLMDFGADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp HHHHHHHHHTTCCTT-CCBTTBCHHHHHHH----TTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred HHHHHHHHHCCCCCC-CCCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc
Confidence 99998 666 48899999999999 89999999999999999999998999887665
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=266.39 Aligned_cols=202 Identities=21% Similarity=0.160 Sum_probs=161.4
Q ss_pred cHHHHHHHcCCHHHHHHHHHcChhhHH-----hhhcCCCCCCHHHHHHhcCCH-HHHHHHHhhCCCcccccCCCCCcHHH
Q 036662 3 SKLYEAALAGSVTSLLEFLQKDRLILE-----RAAMNCPSETPLHVAALLRHK-DFAKEILRQKPGIAGELDSRKSSALH 76 (316)
Q Consensus 3 t~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~~~~~~~d~~g~tpLh 76 (316)
++|+.||+.|+.++|+.||+.+++... .+..+..|.||||.|+..++. ++++.|++.|+++ +.+|.+|+||||
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpLh 91 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT-TCCCTTSCCHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHHH
Confidence 799999999999999999998875321 133577899999999998875 5889999999998 999999999999
Q ss_pred HHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHH
Q 036662 77 IASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAV 156 (316)
Q Consensus 77 ~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~ 156 (316)
+|+..|+.++ +++|++ .+++++..+.+|.||+|+|+..++.+++++|++.|++ +|.+|.+|+||||+|+
T Consensus 92 ~A~~~g~~~~-------v~~Ll~-~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~---~n~~d~~g~TpL~~A~ 160 (269)
T 4b93_B 92 VAALHGRADL-------IPLLLK-HGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK---PNKKDLSGNTPLIYAC 160 (269)
T ss_dssp HHHHTTCTTH-------HHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTCCCHHHHHH
T ss_pred HHHHcCcHHH-------HHHHHh-cCCCcCccCCCCCCccccccccChHHHHHHHHHCCCC---CCCCCCCCCCHHHHHH
Confidence 9999999999 999999 8899999999999999999999999999999999999 9999999999999999
Q ss_pred hcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCcccccccccc
Q 036662 157 ADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQT 220 (316)
Q Consensus 157 ~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~ 220 (316)
..|+.++++ ++|.+|..|.||||+|+. .++.+++++|+++|++++.....+.+|+.++..
T Consensus 161 ~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~----~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 161 SGGHHELVALLLQHGASINASNNKGNTALHEAVI----EKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp HTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred HCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHH----cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence 999999998 899999999999999999 899999999999999999999999999887754
No 12
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.6e-37 Score=252.77 Aligned_cols=182 Identities=20% Similarity=0.245 Sum_probs=171.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCh-hhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDR-LILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
.||||.|+..|+.+.++.|++++. ++ +..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQV---DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGA 81 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 589999999999999999999887 55 445889999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcC-CCccccccccCCCCcHHHHHHhcC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENT-DDSEFLNAKDDYGMSILHLAVADK 159 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~d~~g~t~Lh~A~~~~ 159 (316)
.|+.++ +++|++..+.+++..|..|+||||+|+..|+.+++++|+++| ++ ++.+|.+|+||||+|+..+
T Consensus 82 ~~~~~~-------~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 82 QGRTEI-------LAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED---IDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp TTCHHH-------HHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC---TTCCCTTSCCHHHHHHHSS
T ss_pred cCCHHH-------HHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---cCCCCCCCCCHHHHHHHhc
Confidence 999988 999997789899999999999999999999999999999999 78 9999999999999999998
Q ss_pred C-----cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhC
Q 036662 160 Q-----IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAG 201 (316)
Q Consensus 160 ~-----~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~g 201 (316)
+ .++++ +++.+|..|+||||+|+. .++.+++++|+++|
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQ----KGYTEISKILAQYN 201 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHTCC
T ss_pred cchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHH----cCCHhHHHHHHhcC
Confidence 8 77777 899999999999999999 89999999999987
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.7e-37 Score=259.75 Aligned_cols=184 Identities=19% Similarity=0.171 Sum_probs=174.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 115 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVPV---NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAAS 115 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCCC---CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 479999999999999999999999877 445889999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++
T Consensus 116 ~~~~~~-------~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 116 KNRHEI-------AVMLLE-GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS---TNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHTTC
T ss_pred cCCHHH-------HHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC---ccccCCCCCCHHHHHHHCCC
Confidence 999988 999999 8899999999999999999999999999999999999 99999999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCC
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAI 203 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~ 203 (316)
.++++ +++.+|..|.||||+|.. .++.+++++|.++|++
T Consensus 185 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~----~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 185 VEEAKFLVTQGASIYIENKEEKTPLQVAKG----GLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHSCH----HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHh----hHHHHHHHHHcccccc
Confidence 99998 899999999999999998 7899999999999876
No 14
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-36 Score=262.27 Aligned_cols=202 Identities=18% Similarity=0.088 Sum_probs=143.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.||||.|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..
T Consensus 40 ~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 115 (285)
T 1wdy_A 40 WTPLHNAVQMSREDIVELLLRHGADP---VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVY 115 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHh
Confidence 46777777777777777777776655 233666777777777777777777777777776 66677777777777777
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccc----------cCCCCcHHHHHHhcCCHHHHHHHHhc-CCCccccccccCCCCc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAP----------LIWVETILHLCVKHNQLEALKVLLEN-TDDSEFLNAKDDYGMS 150 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~----------d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~d~~g~t 150 (316)
|+.++ +++|++ .+.+++.. +..|.||||+|+..|+.+++++|++. |++ ++.+|..|+|
T Consensus 116 ~~~~~-------~~~Ll~-~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~g~t 184 (285)
T 1wdy_A 116 GKVKA-------LKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD---VNACDNMGRN 184 (285)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC---TTCCCTTSCC
T ss_pred CCHHH-------HHHHHH-hCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC---CCccCCCCCC
Confidence 66666 777777 66666555 66677778877777777777777776 777 7777777777
Q ss_pred HHHHHHhcCC----cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHH-hCCCcccccCCcccccccc
Q 036662 151 ILHLAVADKQ----IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRR-AGAISAKEMQQPATKVSIT 218 (316)
Q Consensus 151 ~Lh~A~~~~~----~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~-~ga~~~~~~~~~~~~~~~~ 218 (316)
|||+|+..++ .++++ +++.+|..|.||||+|+. .++.+++++|++ .|++.+.....+.++...+
T Consensus 185 ~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A 260 (285)
T 1wdy_A 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE----KKHLGLVQRLLEQEHIEINDTDSDGKTALLLA 260 (285)
T ss_dssp HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHH----TTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH----cCCHHHHHHHHhccCCCccccCCCCCcHHHHH
Confidence 7777777777 44544 677777777777777777 677777777777 7777777777777776655
Q ss_pred ccCc
Q 036662 219 QTNS 222 (316)
Q Consensus 219 ~~~~ 222 (316)
....
T Consensus 261 ~~~~ 264 (285)
T 1wdy_A 261 VELK 264 (285)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 4443
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.3e-36 Score=260.54 Aligned_cols=186 Identities=19% Similarity=0.151 Sum_probs=172.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+.||||+|+..|+.++|+.|+++++++ +.+|..|.||||+|+..|+.+++++|+++++...+.+|..|.||||+|+.
T Consensus 57 g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 57 GETALHLAARYSRSDAAKRLLEASADA---NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 479999999999999999999999887 44589999999999999999999999999984448999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+
T Consensus 134 ~~~~~~-------v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 134 LAVEGM-------LEDLIN-SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN---KDMQNNREETPLFLAAREGS 202 (253)
T ss_dssp HTCSSH-------HHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTC
T ss_pred cChHHH-------HHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHCCC
Confidence 999999 999999 8999999999999999999999999999999999999 99999999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCc
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAIS 204 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~ 204 (316)
.++++ +++.+|..|+||+|+|+. .++.+++++|......+
T Consensus 203 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~----~g~~~i~~~l~~~~~~~ 249 (253)
T 1yyh_A 203 YETAKVLLDHFANRDITDHMDRLPRDIAQE----RMHHDIVRLLDLEHHHH 249 (253)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHC-----
T ss_pred HHHHHHHHHcCCCccccccCCCCHHHHHHH----cCCHHHHHHHHHHhhhc
Confidence 99998 899999999999999999 89999999998655443
No 16
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.7e-36 Score=270.44 Aligned_cols=195 Identities=22% Similarity=0.187 Sum_probs=159.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcC-CCCCCHHHHHHhcCCHHHHHHHHhhCCCc-----------------
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMN-CPSETPLHVAALLRHKDFAKEILRQKPGI----------------- 63 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----------------- 63 (316)
+|+||.|++.|++++|+.||++|++++. ++ ..|+||||+|+..|+.++|++||++|+++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~---~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNF---QEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTC---CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCc---cCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 5899999999999999999999998743 34 45899999999999999999999998764
Q ss_pred ---------------ccccCCCCCcHHHHHHHcCCccc------------------------------------ccccHH
Q 036662 64 ---------------AGELDSRKSSALHIASQKRYVGM------------------------------------KSNRID 92 (316)
Q Consensus 64 ---------------~~~~d~~g~tpLh~A~~~g~~~~------------------------------------~~~~~~ 92 (316)
.+..|..|.||||+|+..|+.++ ..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 14467778888888888887766 345566
Q ss_pred HHHHHHHhCCCCcccccCCCCcHHHHHHhcCC----HHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec---
Q 036662 93 VLEELVRARPLAASAPLIWVETILHLCVKHNQ----LEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN--- 165 (316)
Q Consensus 93 iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~--- 165 (316)
++++||++.+++++.+|..|+|+||.++..++ .+++++|+++|++ +|.+|.+|+||||+|+..|+.++++
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad---~n~~d~~g~t~L~~a~~~~~~~~v~~Ll 259 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD---VNVRGERGKTPLILAVEKKHLGLVQRLL 259 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC---TTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhhhhHHHHHHH
Confidence 67777765677777777777777776665433 3566777777777 8889999999999999999998887
Q ss_pred -----ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCccc
Q 036662 166 -----QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAK 206 (316)
Q Consensus 166 -----~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~ 206 (316)
+++.+|.+|+||||+|+. .++.+++++|+++||+++.
T Consensus 260 ~~~~~~vn~~d~~G~TpL~~A~~----~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 260 EQEHIEINDTDSDGKTALLLAVE----LKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp TSTTCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHTTSCSSTT
T ss_pred HhcCCcccCcCCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCCC
Confidence 789999999999999999 8999999999999998864
No 17
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.6e-36 Score=269.50 Aligned_cols=199 Identities=21% Similarity=0.159 Sum_probs=181.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||+|+..|+.++|++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.
T Consensus 58 g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 133 (351)
T 3utm_A 58 KSTPLHLAAGYNRVRIVQLLLQHGADV---HAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAAS 133 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 469999999999999999999999887 445889999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccc----------------------------------------------------
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAP---------------------------------------------------- 108 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~---------------------------------------------------- 108 (316)
.|+.++ +++|++ .+.+++..
T Consensus 134 ~~~~~~-------v~~Ll~-~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 205 (351)
T 3utm_A 134 KNRVEV-------CSLLLS-HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINF 205 (351)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTC
T ss_pred cCCHHH-------HHHHHH-cCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccc
Confidence 999888 999999 66665543
Q ss_pred --cCCCCcHHHHHHhc---CCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCC
Q 036662 109 --LIWVETILHLCVKH---NQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFT 176 (316)
Q Consensus 109 --d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~T 176 (316)
+..|+||||+|+.. ++.+++++|++.|++ +|.+|.+|+||||+|+..|+.++++ +++.+|..|+|
T Consensus 206 ~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t 282 (351)
T 3utm_A 206 KQPQSHETALHCAVASLHPKRKQVAELLLRKGAN---VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQT 282 (351)
T ss_dssp CCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC---cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 35678999999999 558999999999999 9999999999999999999999999 89999999999
Q ss_pred HHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCcccccccc
Q 036662 177 AWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSIT 218 (316)
Q Consensus 177 pL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~ 218 (316)
|||+|+. .++.+++++|+++|++++.....+.++.+..
T Consensus 283 ~L~~A~~----~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 283 ALHRAAL----AGHLQTCRLLLSYGSDPSIISLQGFTAAQMG 320 (351)
T ss_dssp HHHHHHH----HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS
T ss_pred HHHHHHH----cCcHHHHHHHHHcCCCCCCcCCCCCChhhhh
Confidence 9999999 8999999999999999998888888877654
No 18
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=8.7e-38 Score=264.82 Aligned_cols=192 Identities=20% Similarity=0.188 Sum_probs=171.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhh-HHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLI-LERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIAS 79 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~ 79 (316)
++||||.|+..|+.++++.|++.+... ...+.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 8 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 86 (236)
T 1ikn_D 8 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLAC 86 (236)
T ss_dssp CCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHH
T ss_pred CCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 579999999999999999999987631 012456889999999999999999999999999998 889999999999999
Q ss_pred HcCCcccccccHHHHHHHHHhCC-----CCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccC-CCCcHHH
Q 036662 80 QKRYVGMKSNRIDVLEELVRARP-----LAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDD-YGMSILH 153 (316)
Q Consensus 80 ~~g~~~~~~~~~~iv~~Ll~~~~-----~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~-~g~t~Lh 153 (316)
..|+.++ +++|++... ..++..|..|+||||+|+.+|+.+++++|+++|++ ++.+|. .|+||||
T Consensus 87 ~~~~~~~-------v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 87 EQGCLAS-------VGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD---VNAQEPCNGRTALH 156 (236)
T ss_dssp HHTCHHH-------HHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTTCCCHHH
T ss_pred HcCCHHH-------HHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCCHHH
Confidence 9999988 999999432 23677889999999999999999999999999999 999998 9999999
Q ss_pred HHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccc
Q 036662 154 LAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKE 207 (316)
Q Consensus 154 ~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~ 207 (316)
+|+..|+.++++ +++.+|..|.||||+|+. .++.+++++|+++|++....
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~----~~~~~~~~~Ll~~ga~~~~~ 213 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWG----RPSTRIQQQLGQLTLENLQM 213 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTT----SSCHHHHHHHHTTSCGGGSS
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHc----cCchHHHHHHHHcchhhhhc
Confidence 999999999998 899999999999999999 89999999999999988743
No 19
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.7e-36 Score=240.83 Aligned_cols=160 Identities=24% Similarity=0.302 Sum_probs=137.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.++|+.||+.|+.++|+.||++|+++ +.+|..|+||||+|+..|+.++++.|+++|+++ +.+|..|+||||+|+..
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadv---n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADV---NASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHc
Confidence 35799999999999999999999887 455899999999999999999999999999998 88999999999999999
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQI 161 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 161 (316)
|+.++ +++|++ .+++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+.
T Consensus 81 g~~~~-------v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~G~TpL~~A~~---- 145 (169)
T 4gpm_A 81 GHKEV-------VKLLIS-KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD---VNTSDSDGRTPLDLARE---- 145 (169)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHH----
T ss_pred CCHHH-------HHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHH----
Confidence 99888 999999 8899999999999999999999999999999999998 77777776666666665
Q ss_pred ceecccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCccc
Q 036662 162 EYYNQSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAK 206 (316)
Q Consensus 162 ~~v~~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~ 206 (316)
.++.+++++|+++||+...
T Consensus 146 --------------------------~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 146 --------------------------HGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp --------------------------TTCHHHHHHHHTC------
T ss_pred --------------------------cCCHHHHHHHHHCCCCcCC
Confidence 4567789999999998743
No 20
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3.3e-37 Score=264.41 Aligned_cols=192 Identities=22% Similarity=0.206 Sum_probs=169.5
Q ss_pred CCcHHHHHHHcCCHH----HHHHHHHcChhhHHhh-hcCCCCCCHHHHHHhc---CCHHHHHHHHhhCCCccc-------
Q 036662 1 MESKLYEAALAGSVT----SLLEFLQKDRLILERA-AMNCPSETPLHVAALL---RHKDFAKEILRQKPGIAG------- 65 (316)
Q Consensus 1 m~t~L~~A~~~g~~~----~v~~Ll~~~~~~~~~~-~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~------- 65 (316)
++||||.|++.|+.+ ++++|++.+.+++... .+|..|+||||+|+.. |+.+++++|+++|+++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 479999999999997 5566777888774310 1488999999999999 999999999999987621
Q ss_pred ---ccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCC-------------CCcHHHHHHhcCCHHHHH
Q 036662 66 ---ELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIW-------------VETILHLCVKHNQLEALK 129 (316)
Q Consensus 66 ---~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~-------------g~t~Lh~A~~~g~~~~v~ 129 (316)
.+|..|.||||+|+..|+.++ +++|++ .+.+++.+|.. |+||||+|+..|+.++++
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~-------v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~ 153 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQC-------VKLLVE-NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVT 153 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHH
T ss_pred ccccccccCCCHHHHHHHcCCHHH-------HHHHHH-cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 234789999999999999988 999999 78899988876 999999999999999999
Q ss_pred HHHh---cCCCccccccccCCCCcHHHHHHh--cCCcc-------eec-------cc-------ccccCCCCCHHHHHHh
Q 036662 130 VLLE---NTDDSEFLNAKDDYGMSILHLAVA--DKQIE-------YYN-------QS-------ECCYANGFTAWDILAN 183 (316)
Q Consensus 130 ~Ll~---~g~~~~~~~~~d~~g~t~Lh~A~~--~~~~~-------~v~-------~~-------~~~~~~g~TpL~~a~~ 183 (316)
+|++ .|++ +|.+|.+|+||||+|+. .++.+ +++ ++ +.+|..|+||||+|+.
T Consensus 154 ~Ll~~~~~ga~---~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~ 230 (256)
T 2etb_A 154 YLLENPHQPAS---LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAK 230 (256)
T ss_dssp HHHHCSSCCCC---TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HHHhccccCCC---cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHH
Confidence 9999 9999 99999999999999999 77777 777 66 8999999999999999
Q ss_pred ccCCCcHHHHHHHHHHhCCCcccc
Q 036662 184 SKRKMKDWEIGELLRRAGAISAKE 207 (316)
Q Consensus 184 ~~~~~~~~~i~~~Ll~~ga~~~~~ 207 (316)
.++.+++++|+++|++....
T Consensus 231 ----~g~~~~v~~Ll~~g~~~~~~ 250 (256)
T 2etb_A 231 ----EGKIEIFRHILQREFSGAAA 250 (256)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHH
T ss_pred ----hCCHHHHHHHHhCCCCCCCc
Confidence 89999999999999987543
No 21
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-35 Score=273.86 Aligned_cols=211 Identities=21% Similarity=0.194 Sum_probs=152.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.||||.|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..
T Consensus 147 ~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 222 (437)
T 1n11_A 147 FTPLHVAAKYGKVRVAELLLERDAHP---NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQ 222 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHc
Confidence 35566666666666666666555544 223555555566655555555555555555554 44555555555555555
Q ss_pred CCccc--------------------------ccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcC
Q 036662 82 RYVGM--------------------------KSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENT 135 (316)
Q Consensus 82 g~~~~--------------------------~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g 135 (316)
|+.++ ..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|
T Consensus 223 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 301 (437)
T 1n11_A 223 NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLS-KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG 301 (437)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 55444 3445555888888 77777778888888888888888888888888888
Q ss_pred CCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCccccc
Q 036662 136 DDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEM 208 (316)
Q Consensus 136 ~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~ 208 (316)
++ ++.+|..|+||||+|+..|+.++++ ++|.+|..|.||||+|+. .++.+++++|+++|++++...
T Consensus 302 ~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~ga~~~~~~ 374 (437)
T 1n11_A 302 VM---VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ----QGHTDIVTLLLKNGASPNEVS 374 (437)
T ss_dssp CC---TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSCCCC
T ss_pred cc---CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH----CChHHHHHHHHHCcCCCCCCC
Confidence 88 8888888999999999999888888 788889999999999998 788899999999999998888
Q ss_pred CCccccccccccCccc
Q 036662 209 QQPATKVSITQTNSLT 224 (316)
Q Consensus 209 ~~~~~~~~~~~~~~~~ 224 (316)
..+.++.+++......
T Consensus 375 ~~g~t~l~~A~~~g~~ 390 (437)
T 1n11_A 375 SDGTTPLAIAKRLGYI 390 (437)
T ss_dssp SSSCCHHHHHHHTTCH
T ss_pred CCCCCHHHHHHHcCcH
Confidence 8888888766555443
No 22
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-36 Score=262.57 Aligned_cols=203 Identities=19% Similarity=0.150 Sum_probs=182.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
+||||.||..|+.++|+.|+++++++ +..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADI---NYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASC 116 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCT---TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHc
Confidence 48999999999999999999999887 445899999999999999999999999999998 88999999999999999
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHh-cCCCcc---------------------
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLE-NTDDSE--------------------- 139 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~-~g~~~~--------------------- 139 (316)
|+.++ +++|++ ++.+++..|..|.||||+|+..++.++++.++. .+.+..
T Consensus 117 g~~~~-------v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (299)
T 1s70_B 117 GYLDI-------AEYLIS-QGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSG 188 (299)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHH-------HHHHHh-CCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhcc
Confidence 99988 999999 889999999999999999999999999988775 343310
Q ss_pred --ccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCC
Q 036662 140 --FLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQ 210 (316)
Q Consensus 140 --~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~ 210 (316)
.....+..|.||||+|+..|+.++++ +++.+|..|.||||+|+. .++.+++++|+++|++.+.....
T Consensus 189 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~~d~~ 264 (299)
T 1s70_B 189 HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAH----WGKEEACRILVENLCDMEAVNKV 264 (299)
T ss_dssp CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHh----cCCHHHHHHHHHcCCCCCCcCCC
Confidence 02235678999999999999999998 899999999999999999 89999999999999999988888
Q ss_pred cccccccccc
Q 036662 211 PATKVSITQT 220 (316)
Q Consensus 211 ~~~~~~~~~~ 220 (316)
+.+|.+.+..
T Consensus 265 g~t~l~~A~~ 274 (299)
T 1s70_B 265 GQTAFDVADE 274 (299)
T ss_dssp SCCTTTSCCS
T ss_pred CCCHHHHHHH
Confidence 8888876643
No 23
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.1e-36 Score=263.66 Aligned_cols=193 Identities=20% Similarity=0.213 Sum_probs=164.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHc----ChhhHHhh-hcCCCCCCHHHHHHhc---CCHHHHHHHHhhCCCcc------cc
Q 036662 1 MESKLYEAALAGSVTSLLEFLQK----DRLILERA-AMNCPSETPLHVAALL---RHKDFAKEILRQKPGIA------GE 66 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~----~~~~~~~~-~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~------~~ 66 (316)
++||||.|++.|+.++|+.|++. +.++.... ..|..|.||||+|+.. |+.+++++|+++|+++. +.
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 46999999999999999999975 33332211 2478999999999987 99999999999987631 22
Q ss_pred ----cCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccC--------------CCCcHHHHHHhcCCHHHH
Q 036662 67 ----LDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLI--------------WVETILHLCVKHNQLEAL 128 (316)
Q Consensus 67 ----~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~--------------~g~t~Lh~A~~~g~~~~v 128 (316)
.|..|.||||+|+..|+.++ +++|++ .+.+++.++. .|+||||+|+.+|+.+++
T Consensus 93 ~~~~~d~~g~tpL~~A~~~g~~~~-------v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIERRNMTL-------VTLLVE-NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred ccccccCCCCCHHHHHHHcCCHHH-------HHHHHH-CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 57799999999999999988 999999 7889998887 799999999999999999
Q ss_pred HHHHh---cCCCccccccccCCCCcHHHHHHhcCC---------cceec-------ccc-------cccCCCCCHHHHHH
Q 036662 129 KVLLE---NTDDSEFLNAKDDYGMSILHLAVADKQ---------IEYYN-------QSE-------CCYANGFTAWDILA 182 (316)
Q Consensus 129 ~~Ll~---~g~~~~~~~~~d~~g~t~Lh~A~~~~~---------~~~v~-------~~~-------~~~~~g~TpL~~a~ 182 (316)
++|++ .|++ ++.+|.+|+||||+|+..|+ .++++ +++ .+|..|+||||+|+
T Consensus 165 ~~Ll~~~~~gad---~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~ 241 (273)
T 2pnn_A 165 KFLLQNSWQPAD---ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAA 241 (273)
T ss_dssp HHHHHCSSCCCC---TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHhcccCCCC---ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHH
Confidence 99999 8999 99999999999999999888 56666 554 58999999999999
Q ss_pred hccCCCcHHHHHHHHHHhCC-Cccccc
Q 036662 183 NSKRKMKDWEIGELLRRAGA-ISAKEM 208 (316)
Q Consensus 183 ~~~~~~~~~~i~~~Ll~~ga-~~~~~~ 208 (316)
. .++.+++++|+++|+ ++....
T Consensus 242 ~----~g~~~iv~~Ll~~ga~dp~~~~ 264 (273)
T 2pnn_A 242 S----SGKIGVLAYILQREIHEPECRH 264 (273)
T ss_dssp H----TTCHHHHHHHHHHHTC------
T ss_pred H----hChHHHHHHHHHCCCCCchhhh
Confidence 9 899999999999999 554433
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.1e-36 Score=270.03 Aligned_cols=204 Identities=17% Similarity=0.104 Sum_probs=182.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.||||+|+..|+.++|++|++++.++ +.+|..|.||||+|+..|+.++|++|+++|++. .+.+|.||||+|+..
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A~~~ 94 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVSP---TIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVMA 94 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCc---cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHHHHc
Confidence 58999999999999999999999887 455899999999999999999999999999965 345899999999999
Q ss_pred CCcccccccHHHHHHHHHhC---CCCccc-----------------ccCCCCcHHHHHHhcC--CHHHHHHHHhcCCCcc
Q 036662 82 RYVGMKSNRIDVLEELVRAR---PLAASA-----------------PLIWVETILHLCVKHN--QLEALKVLLENTDDSE 139 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~---~~~~~~-----------------~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~~~~ 139 (316)
|+.++ +++|++.. +..++. .|..|+||||+|+..| +.+++++|+++|++
T Consensus 95 g~~~~-------v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-- 165 (364)
T 3ljn_A 95 NKTDL-------VVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-- 165 (364)
T ss_dssp TCHHH-------HHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC--
T ss_pred CCHHH-------HHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC--
Confidence 99988 99999931 566665 7889999999999999 99999999999999
Q ss_pred ccccccCCCCcHHHHHHhcCCcceec-------c-----cccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccc
Q 036662 140 FLNAKDDYGMSILHLAVADKQIEYYN-------Q-----SECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKE 207 (316)
Q Consensus 140 ~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~-----~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~ 207 (316)
++.+|.+|+||||+|+..|+.++++ + ++.+|..|.||||+|+. .++.+++++|+++|++.+..
T Consensus 166 -~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~gad~~~~ 240 (364)
T 3ljn_A 166 -PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAIL----INWEDVAMRFVEMGIDVNME 240 (364)
T ss_dssp -TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHT----TTCHHHHHHHHTTTCCTTCC
T ss_pred -CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHH----cCCHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999998 4 88999999999999999 89999999999999999988
Q ss_pred cCCccccccccccCcccc
Q 036662 208 MQQPATKVSITQTNSLTS 225 (316)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ 225 (316)
...+.+++..+.......
T Consensus 241 d~~g~tpL~~A~~~g~~~ 258 (364)
T 3ljn_A 241 DNEHTVPLYLSVRAAMVL 258 (364)
T ss_dssp CTTSCCHHHHHHHTCCHH
T ss_pred CCCCCCHHHHHHHhChHH
Confidence 888888887665554433
No 25
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.2e-36 Score=262.70 Aligned_cols=185 Identities=17% Similarity=0.112 Sum_probs=171.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||+|+..|+.++|+.|+++++++.. .+|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGALKNL-----LENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVD 104 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGGGSC-----CTTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCC-----CCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHH
Confidence 47999999999999999999999997732 25999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCC-CcHHHHHHhcCCHHHHHHHHhcCCCccccccccC-CCCcHHHHHHhc
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWV-ETILHLCVKHNQLEALKVLLENTDDSEFLNAKDD-YGMSILHLAVAD 158 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g-~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~-~g~t~Lh~A~~~ 158 (316)
.|+.++ +++|++ .+.+++.+|..| .||||+|+..|+.+++++|+++|++ . .|. .|+||||+|+..
T Consensus 105 ~g~~~~-------v~~Ll~-~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~---~--~~~~~g~t~L~~A~~~ 171 (285)
T 3kea_A 105 SGNMQT-------VKLFVK-KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS---T--FDLAILLSCIHITIKN 171 (285)
T ss_dssp TTCHHH-------HHHHHH-HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT---T--CCCSTHHHHHHHHHHT
T ss_pred cCCHHH-------HHHHHh-cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc---c--ccccCCccHHHHHHHc
Confidence 999988 999999 689999999999 7999999999999999999999987 3 333 899999999999
Q ss_pred CCcceec-------ccccccCCCCCH-HHHHHhccCCCcHHHHHHHHHHhCCCccccc
Q 036662 159 KQIEYYN-------QSECCYANGFTA-WDILANSKRKMKDWEIGELLRRAGAISAKEM 208 (316)
Q Consensus 159 ~~~~~v~-------~~~~~~~~g~Tp-L~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~ 208 (316)
|+.++++ +++.+|..|+|| ||+|+. .++.+++++|+++|++++...
T Consensus 172 g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~----~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 172 GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAID----NKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp TCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHH----HTCHHHHHHHTTSCBCSTTTT
T ss_pred ChHHHHHHHHHcCCCCCcccCCCCChHHHHHHH----cCCHHHHHHHHHcCCCCCCCC
Confidence 9999999 899999999998 999999 889999999999999997665
No 26
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.7e-35 Score=247.56 Aligned_cols=203 Identities=16% Similarity=0.115 Sum_probs=184.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
+|+||.|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|+++|+++....+..|.||||+|+..
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDV---RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCc---CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 58999999999999999999999887 445889999999999999999999999999998666777799999999999
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC-
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ- 160 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~- 160 (316)
|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|.||||+|+..++
T Consensus 87 ~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~---~~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 87 GHLSM-------VVQLMK-YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD---VDMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHCCS
T ss_pred CCHHH-------HHHHHH-cCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC---ccccCCCCCcHHHHHHHhCCh
Confidence 99988 999999 8899999999999999999999999999999999999 99999999999999997776
Q ss_pred cceec-------ccccccC-CCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCccccccccccCc
Q 036662 161 IEYYN-------QSECCYA-NGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQTNS 222 (316)
Q Consensus 161 ~~~v~-------~~~~~~~-~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 222 (316)
.++++ +++..+. .|.||||+|+. .++.+++++|+++|++.+.....+.++...+...+
T Consensus 156 ~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 156 VDPTRLLLTFNVSVNLGDKYHKNTALHWAVL----AGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp STTHHHHHHTTCCTTCCCTTTCCCHHHHHHH----HTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHHHHHHhcCCCcchhhccCCCcHHHHHHH----cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 56655 7888887 99999999999 88999999999999999988888888876655443
No 27
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=8e-36 Score=252.92 Aligned_cols=183 Identities=17% Similarity=0.120 Sum_probs=167.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCC----CcccccCCCCCcHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKP----GIAGELDSRKSSALH 76 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~----~~~~~~d~~g~tpLh 76 (316)
+.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++++ ++ +..|..|.||||
T Consensus 46 g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~ 121 (241)
T 1k1a_A 46 RQTPLHLAVITTLPSVVRLLVTAGASP---MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALH 121 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHH
Confidence 469999999999999999999999887 4458899999999999999999999999998 66 888999999999
Q ss_pred HHHHcCCcccccccHHHHHHHHHhCCCCccccc-CCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHH
Q 036662 77 IASQKRYVGMKSNRIDVLEELVRARPLAASAPL-IWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLA 155 (316)
Q Consensus 77 ~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 155 (316)
+|+..|+.++ +++|++ .+.+++..+ ..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|
T Consensus 122 ~A~~~~~~~~-------~~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A 190 (241)
T 1k1a_A 122 VAVNTECQET-------VQLLLE-RGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN---VNAQMYSGSSALHSA 190 (241)
T ss_dssp HHHHHTCHHH-------HHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHH
T ss_pred HHHHcCCHHH-------HHHHHH-cCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHH
Confidence 9999999988 999999 888888888 8899999999999999999999999999 999999999999999
Q ss_pred HhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCC
Q 036662 156 VADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGA 202 (316)
Q Consensus 156 ~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga 202 (316)
+..|+.++++ +++.+|..|+||||+|+. .++.++++.|.+.++
T Consensus 191 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~----~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 191 SGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS----RRVIDILRGKATRPA 240 (241)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSS----HHHHHHHTC------
T ss_pred HHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHh----cCcHHHHhhhccCCC
Confidence 9999999998 899999999999999999 899999999988765
No 28
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-36 Score=273.65 Aligned_cols=203 Identities=20% Similarity=0.194 Sum_probs=181.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHH--------HcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCC
Q 036662 1 MESKLYEAALAGSVTSLLEFL--------QKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKS 72 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 72 (316)
++||||+|+..|+.++++.|+ +.|.++ +.+|..|.||||+|+..|+.++|++|+++|+++ +.+|..|.
T Consensus 125 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v---n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~ 200 (373)
T 2fo1_E 125 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV---NAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSER 200 (373)
T ss_dssp CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC---cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCC
Confidence 469999999999998888776 678776 455899999999999999999999999999998 88999999
Q ss_pred cHHHHHHHcCCcccccccHHHHHHHHHhCC---CCcccccCCCCcHHHHHHhcC---CHHHHHHHHhcCCCcccccc---
Q 036662 73 SALHIASQKRYVGMKSNRIDVLEELVRARP---LAASAPLIWVETILHLCVKHN---QLEALKVLLENTDDSEFLNA--- 143 (316)
Q Consensus 73 tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~---~~~~~~d~~g~t~Lh~A~~~g---~~~~v~~Ll~~g~~~~~~~~--- 143 (316)
||||+|+..|+.++ +++|++ .+ .+++..|..|+||||+|+..+ +.+++++|+++|++ ++.
T Consensus 201 t~L~~A~~~g~~~~-------v~~Ll~-~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~---~~~~~~ 269 (373)
T 2fo1_E 201 SALHQAAANRDFGM-------MVYMLN-STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK---VDYDGA 269 (373)
T ss_dssp CHHHHHHHTTCHHH-------HHHHTT-SHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC---SSCCSG
T ss_pred CHHHHHHHCCCHHH-------HHHHHh-cCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC---cccccc
Confidence 99999999999988 999999 55 678888999999999999998 89999999999998 554
Q ss_pred -----ccCCCCcHHHHHHhcCCcceec--------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCC
Q 036662 144 -----KDDYGMSILHLAVADKQIEYYN--------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQ 210 (316)
Q Consensus 144 -----~d~~g~t~Lh~A~~~~~~~~v~--------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~ 210 (316)
+|..|+||||+|+..|+.++++ +++.+|..|.||||+|+. .++.+++++|+++|++.+.....
T Consensus 270 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~gad~~~~d~~ 345 (373)
T 2fo1_E 270 ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ----EGRIEVVMYLIQQGASVEAVDAT 345 (373)
T ss_dssp GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH----HTCHHHHHHHHHTTCCSSCCCSS
T ss_pred cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCccCCCCC
Confidence 6789999999999999999988 788999999999999999 88999999999999999888888
Q ss_pred ccccccccccCc
Q 036662 211 PATKVSITQTNS 222 (316)
Q Consensus 211 ~~~~~~~~~~~~ 222 (316)
+.++...+....
T Consensus 346 g~t~l~~A~~~g 357 (373)
T 2fo1_E 346 DHTARQLAQANN 357 (373)
T ss_dssp SCCHHHHHHHTT
T ss_pred CCCHHHHHHHcC
Confidence 888876654443
No 29
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.8e-35 Score=253.14 Aligned_cols=208 Identities=17% Similarity=0.123 Sum_probs=186.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
+|+||.|++.|+.+++++|+++++++... .+..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQ--EEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHc
Confidence 68999999999999999999999877432 2678999999999999999999999999998 88999999999999999
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccc----------cCCCCcH
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAK----------DDYGMSI 151 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~----------d~~g~t~ 151 (316)
|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|++.|++ ++.+ +..|.||
T Consensus 83 ~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~~~~~~~~~~g~t~ 151 (285)
T 1wdy_A 83 GSVKL-------LKLFLS-KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN---VNLRRKTKEDQERLRKGGATA 151 (285)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC---TTCCCCCCHHHHHTTCCCCCH
T ss_pred CCHHH-------HHHHHH-cCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCC---cccccccHHHHHhhccCCCcH
Confidence 99988 999999 8899999999999999999999999999999999998 6666 8889999
Q ss_pred HHHHHhcCCcceec--------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCccccccccccCcc
Q 036662 152 LHLAVADKQIEYYN--------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQTNSL 223 (316)
Q Consensus 152 Lh~A~~~~~~~~v~--------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 223 (316)
||+|+..|+.++++ +++.+|..|.||||+|+.........+++++|+++|++.+.....+.++.........
T Consensus 152 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 231 (285)
T 1wdy_A 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH 231 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 99999999999988 7889999999999999994333333899999999999999888888888766554443
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=260.90 Aligned_cols=184 Identities=19% Similarity=0.199 Sum_probs=144.9
Q ss_pred CcHHHHHHHcCCHH-HHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVT-SLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
.||||.|+..++.+ +++.|++.|.++ +.+|.+|+||||+|+..|+.++|++|++.|+++ +.++..|.||+|+|+.
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~Gadv---n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~ 128 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASGLGV---NVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQ 128 (269)
T ss_dssp ----------------------CCCCT---TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccc
Confidence 58999999988864 789999999987 455899999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.++.++ ++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ +|.+|..|+||||+|+..|+
T Consensus 129 ~~~~~~-------~~~Ll~-~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad---vn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 129 QGHFQV-------VKCLLD-SNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS---INASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp HTCHHH-------HHHHHH-TTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTC
T ss_pred cChHHH-------HHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC---CCccccCCCcHHHHHHHcCC
Confidence 999988 999999 8999999999999999999999999999999999999 99999999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcH-HHHHHHHHHhCCCc
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKD-WEIGELLRRAGAIS 204 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~-~~i~~~Ll~~ga~~ 204 (316)
.++++ +++.+|++|+||||+|++ .+. .++.+.|...++..
T Consensus 198 ~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~----~~~i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 198 VFVVELLLLHGASVQVLNKRQRTAVDCAEQ----NSKIMELLQVVPSCVASL 245 (269)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCSGGGSCT----TCHHHHHTTC--------
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHh----CCcHHHHHHHHHHhchhh
Confidence 99999 899999999999999987 444 44555555555544
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.1e-35 Score=246.61 Aligned_cols=180 Identities=16% Similarity=0.151 Sum_probs=163.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhC--CCcccccCCCCCcHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQK--PGIAGELDSRKSSALHIA 78 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~~d~~g~tpLh~A 78 (316)
++||||+|+..|+.+++++|++++++.......+..|.||||+|+..|+.+++++|+++| +++ +..|..|.||||+|
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A 114 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLA 114 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHH
Confidence 479999999999999999999999443222225889999999999999999999999999 887 88899999999999
Q ss_pred HHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcC-CCccccccccCCCCcHHHHHHh
Q 036662 79 SQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENT-DDSEFLNAKDDYGMSILHLAVA 157 (316)
Q Consensus 79 ~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~d~~g~t~Lh~A~~ 157 (316)
+..|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|++.| ++ ++.+|.+|+||||+|+.
T Consensus 115 ~~~~~~~~-------~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~d~~g~t~L~~A~~ 183 (228)
T 2dzn_A 115 VGKKWFEV-------SQFLIE-NGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA---VNWQDKQGWTPLFHALA 183 (228)
T ss_dssp HHTTCHHH-------HHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC---SCCCCTTSCCHHHHHHH
T ss_pred HHcCCHhH-------HHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc---ccCcCCCCCCHHHHHHH
Confidence 99999988 999999 89999999999999999999999999999999999 88 99999999999999999
Q ss_pred cCCcceec--------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHH
Q 036662 158 DKQIEYYN--------QSECCYANGFTAWDILANSKRKMKDWEIGELLRR 199 (316)
Q Consensus 158 ~~~~~~v~--------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~ 199 (316)
.|+.++++ +++.+|.+|+||+|+|.. . ++.++|++
T Consensus 184 ~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~----~---~~~~~l~~ 226 (228)
T 2dzn_A 184 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN----E---QVKKFFLN 226 (228)
T ss_dssp TTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS----T---THHHHHHT
T ss_pred cCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH----H---HHHHHHHh
Confidence 99999988 899999999999999976 3 46666664
No 32
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=252.77 Aligned_cols=182 Identities=20% Similarity=0.205 Sum_probs=167.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||+|+..|+.++++.|+++++++ +.+|..|.||||+|+..|+.+++++|+++|+++ + .+..|.||||+|+.
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~ 110 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILLKHGAQV---NGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAAR 110 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHH
Confidence 479999999999999999999999887 445899999999999999999999999999998 4 35669999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ +|. |.+|+||||+|+..++
T Consensus 111 ~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~-~~~g~t~Lh~A~~~~~ 178 (261)
T 2xai_A 111 RGHVEC-------VNSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD---VNQ-GKGQDSPLHAVARTAS 178 (261)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC---TTC-CBTTBCHHHHHHHHTC
T ss_pred cCcHHH-------HHHHHH-cCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC---CCC-CCCCCChHHHHHHcCC
Confidence 999988 999999 8899999999999999999999999999999999999 875 8999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcc
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISA 205 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~ 205 (316)
.++++ +++.+|.+|+||+|+|+. . .+++++|+++++.+.
T Consensus 179 ~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~----~--~~~~~~ll~~~~~~~ 224 (261)
T 2xai_A 179 EELACLLMDFGADTQAKNAEGKRPVELVPP----E--SPLAQLFLEREGPPS 224 (261)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGSCT----T--CTHHHHHHHC-CCCC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCChhhhccc----c--ccHHHHHHhccCCcc
Confidence 99998 899999999999999986 3 348999999887653
No 33
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=5.6e-36 Score=257.23 Aligned_cols=192 Identities=22% Similarity=0.219 Sum_probs=166.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHH----cChhhHHhh-hcCCCCCCHHHHHH---hcCCHHHHHHHHhhCCCc----------
Q 036662 2 ESKLYEAALAGSVTSLLEFLQ----KDRLILERA-AMNCPSETPLHVAA---LLRHKDFAKEILRQKPGI---------- 63 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~-~~~~~g~t~Lh~A~---~~g~~~~v~~Ll~~~~~~---------- 63 (316)
+|+||.|++.|+.+.++.|++ .+.++...+ ..|..|.||||+|+ ..|+.+++++|++.|++.
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 85 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSP 85 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccc
Confidence 589999999999996666655 787775442 23478999999999 679999999999998542
Q ss_pred ccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCccccc--------------CCCCcHHHHHHhcCCHHHHH
Q 036662 64 AGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPL--------------IWVETILHLCVKHNQLEALK 129 (316)
Q Consensus 64 ~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d--------------~~g~t~Lh~A~~~g~~~~v~ 129 (316)
.+..|..|+||||+|+..|+.++ +++|++ .+++++..| ..|+||||+|+..|+.++++
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~-------v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 157 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHY-------VELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVH 157 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHH
T ss_pred ccccccCCCCHHHHHHHcCCHHH-------HHHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHH
Confidence 14456699999999999999988 999999 889999888 68999999999999999999
Q ss_pred HHHh---cCCCccccccccCCCCcHHHHHHhcCC---------cceec-------cc-------ccccCCCCCHHHHHHh
Q 036662 130 VLLE---NTDDSEFLNAKDDYGMSILHLAVADKQ---------IEYYN-------QS-------ECCYANGFTAWDILAN 183 (316)
Q Consensus 130 ~Ll~---~g~~~~~~~~~d~~g~t~Lh~A~~~~~---------~~~v~-------~~-------~~~~~~g~TpL~~a~~ 183 (316)
+|++ .|++ ++.+|.+|+||||+|+..++ .++++ ++ +.+|..|+||||+|+.
T Consensus 158 ~Ll~~~~~ga~---~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~ 234 (260)
T 3jxi_A 158 YLTENGHKQAD---LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAK 234 (260)
T ss_dssp HHHHCSSCCCC---TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HHHhccccCCC---CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHH
Confidence 9999 8999 99999999999999998877 46666 55 7899999999999999
Q ss_pred ccCCCcHHHHHHHHHHhCCCccccc
Q 036662 184 SKRKMKDWEIGELLRRAGAISAKEM 208 (316)
Q Consensus 184 ~~~~~~~~~i~~~Ll~~ga~~~~~~ 208 (316)
.++.+++++|+++|+++....
T Consensus 235 ----~g~~~~v~~Ll~~g~~~~~~~ 255 (260)
T 3jxi_A 235 ----TGKIGIFQHIIRREIADAAAH 255 (260)
T ss_dssp ----TTCHHHHHHHHHHHHHHHC--
T ss_pred ----cCCHHHHHHHHHhCCCccccc
Confidence 899999999999999886543
No 34
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.9e-35 Score=268.43 Aligned_cols=196 Identities=21% Similarity=0.266 Sum_probs=146.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+.||||.|+..|+.++|++|++++.++ +..+..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~---~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 89 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQRGASP---NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAAR 89 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCS---CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHH
Confidence 468999999999999999999988776 344778889999999999999999999998887 7888889999999998
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ ++++++..|..|+||||+|+.+|+.+++++|++.+++ .+..+..|.||||+|+..|+
T Consensus 90 ~g~~~~-------v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~g~t~L~~A~~~g~ 158 (437)
T 1n11_A 90 IGHTNM-------VKLLLE-NNANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS---QACMTKKGFTPLHVAAKYGK 158 (437)
T ss_dssp HTCHHH-------HHHHHH-HTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHH-------HHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC---CcCCCCCCCCHHHHHHHcCC
Confidence 888887 777777 5666666677777777777777777777777777666 66666677777777777777
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCccccc
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKV 215 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~ 215 (316)
.++++ +++..+..|.||||+|+. .++.+++++|+++|++.......+.++.
T Consensus 159 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 216 (437)
T 1n11_A 159 VRVAELLLERDAHPNAAGKNGLTPLHVAVH----HNNLDIVKLLLPRGGSPHSPAWNGYTPL 216 (437)
T ss_dssp HHHHHHHHHTTCCTTCCCSSCCCHHHHHHH----TTCHHHHHHHGGGTCCSCCCCTTCCCHH
T ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 66666 566666667777777666 5666666666666666655544444444
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1e-35 Score=249.53 Aligned_cols=197 Identities=22% Similarity=0.199 Sum_probs=177.1
Q ss_pred cCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCccccccc
Q 036662 11 AGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNR 90 (316)
Q Consensus 11 ~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~ 90 (316)
.|+.+++++|++++.++... .|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~---- 73 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQ--TDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGV---- 73 (223)
T ss_dssp ----CCEETTEETTCCTTCC--CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHH----
T ss_pred CCcHHHHHHHHHcCCCcccc--cCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHH----
Confidence 37888999999999877432 4789999999999999999999999999998 8899999999999999999988
Q ss_pred HHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-----
Q 036662 91 IDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN----- 165 (316)
Q Consensus 91 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~----- 165 (316)
+++|++..+..++..+..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++
T Consensus 74 ---v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 147 (223)
T 2f8y_A 74 ---FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD---VNAVDDLGKSALHWAAAVNNVDAAVVLLKN 147 (223)
T ss_dssp ---HHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHHT
T ss_pred ---HHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC---CcCcCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 99999966668999999999999999999999999999999999 9999999999999999999999998
Q ss_pred --ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCccccccccccCccc
Q 036662 166 --QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQTNSLT 224 (316)
Q Consensus 166 --~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 224 (316)
+++.+|..|.||||+|+. .++.+++++|+++|++++.....+.++...+......
T Consensus 148 g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 204 (223)
T 2f8y_A 148 GANKDMQNNREETPLFLAAR----EGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH 204 (223)
T ss_dssp TCCTTCCCTTCCCHHHHHHH----HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CCCCCCcCCCCcCHHHHHHH----cCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcch
Confidence 899999999999999999 8999999999999999988888888887665554433
No 36
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=9e-35 Score=253.52 Aligned_cols=204 Identities=13% Similarity=0.057 Sum_probs=158.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhh--------HHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCC
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLI--------LERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKS 72 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~--------~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 72 (316)
++|+||+|++.|+.+.+..++..++.- ......|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.
T Consensus 15 ~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~ 93 (285)
T 3d9h_A 15 VPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHV 93 (285)
T ss_dssp ---------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCC
T ss_pred HHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCC
Confidence 479999999999998888877664320 111345889999999999999999999999999998 89999999
Q ss_pred cHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHH
Q 036662 73 SALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSIL 152 (316)
Q Consensus 73 tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~L 152 (316)
||||+|+..|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.. .+|.|||
T Consensus 94 t~L~~A~~~g~~~~-------v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~-~~g~t~L 161 (285)
T 3d9h_A 94 SPLHEACLGGHLSC-------VKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS---VQPE-SDLASPI 161 (285)
T ss_dssp CHHHHHHHTTCHHH-------HHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SSCS-CTTSCHH
T ss_pred CHHHHHHHCCcHHH-------HHHHHH-CCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC---CCCC-CCCCCHH
Confidence 99999999999988 999999 8999999999999999999999999999999999998 6654 4599999
Q ss_pred HHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCccccccccccCc
Q 036662 153 HLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQTNS 222 (316)
Q Consensus 153 h~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 222 (316)
|+|+..|+.++++ +++.+|..|.||||+|+. .++.+++++|+++|++.+. ...+.+++..+....
T Consensus 162 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 162 HEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACE----NQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTA 233 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHH----TTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence 9999999999998 889999999999999999 8999999999999999985 555666665554443
No 37
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.5e-34 Score=242.48 Aligned_cols=180 Identities=17% Similarity=0.118 Sum_probs=165.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+.||||.|+..|+.+++++|++++.++ +.++..|.||||+|+..|+.+++++|+++|+...+..|..|.||||+|+.
T Consensus 44 g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 120 (237)
T 3b7b_A 44 QRTPLMEAAENNHLEAVKYLIKAGALV---DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE 120 (237)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCC---CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Confidence 469999999999999999999999877 44588999999999999999999999999943348899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..++
T Consensus 121 ~~~~~~-------~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~ 189 (237)
T 3b7b_A 121 YKHVDL-------VKLLLS-KGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD---LHAVNIHGDSPLHIAARENR 189 (237)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCC---TTCCCTTCCCHHHHHHHTTC
T ss_pred cCCHHH-------HHHHHH-CCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHhCC
Confidence 999988 999999 8889999999999999999999999999999999999 99999999999999999999
Q ss_pred cceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHH
Q 036662 161 IEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLR 198 (316)
Q Consensus 161 ~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll 198 (316)
.++++ +++.+|++|+||||+|+. .++.+.+..++
T Consensus 190 ~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~----~~~~~~~~~l~ 230 (237)
T 3b7b_A 190 YDCVVLFLSRDSDVTLKNKEGETPLQCASL----NSQVWSALQMS 230 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHSCT----TCHHHHHHHHH
T ss_pred HhHHHHHHHcCCCCCccCCCCCCHHHHHHH----HHHHHHHHHHH
Confidence 99988 899999999999999999 67665444443
No 38
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=7.9e-35 Score=263.39 Aligned_cols=185 Identities=21% Similarity=0.196 Sum_probs=168.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhC---CCcccccCCCCCcHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQK---PGIAGELDSRKSSALHI 77 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~---~~~~~~~d~~g~tpLh~ 77 (316)
+.||||+|+..|+.++|++|+++|+++ +.+|..|.||||+|+..|+.+++++|++++ .++ +..|..|.||||+
T Consensus 166 g~TpL~~A~~~g~~~iv~~Ll~~ga~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~ 241 (373)
T 2fo1_E 166 ENTPLMLAVLARRRRLVAYLMKAGADP---TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMI 241 (373)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHHCCCCC---cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHH
Confidence 479999999999999999999999987 445889999999999999999999999988 677 8899999999999
Q ss_pred HHHcC---CcccccccHHHHHHHHHhCCCCccc--------ccCCCCcHHHHHHhcCCHHHHHHHHhcC-CCcccccccc
Q 036662 78 ASQKR---YVGMKSNRIDVLEELVRARPLAASA--------PLIWVETILHLCVKHNQLEALKVLLENT-DDSEFLNAKD 145 (316)
Q Consensus 78 A~~~g---~~~~~~~~~~iv~~Ll~~~~~~~~~--------~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~d 145 (316)
|+..+ +.++ +++|++ .+.+++. .|..|+||||+|+..|+.+++++|++.+ ++ ++.+|
T Consensus 242 A~~~~~~~~~~~-------v~~Ll~-~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~---~n~~d 310 (373)
T 2fo1_E 242 VAHNEGRDQVAS-------AKLLVE-KGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN---KDKQD 310 (373)
T ss_dssp HHHSCSTTHHHH-------HHHHHH-HTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC---TTCCC
T ss_pred HHHhCCcchHHH-------HHHHHH-CCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC---ccCcC
Confidence 99988 5656 999999 6666654 5779999999999999999999999886 88 99999
Q ss_pred CCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCc
Q 036662 146 DYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAIS 204 (316)
Q Consensus 146 ~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~ 204 (316)
.+|+||||+|+..|+.++++ +++.+|..|+||||+|+. .++.+++++|+++|++.
T Consensus 311 ~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~----~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 311 EDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQA----NNHHNIVDIFDRCRPER 372 (373)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHH----TTCHHHHHHHHTTC---
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHH----cCCHHHHHHHHhcCccc
Confidence 99999999999999999999 899999999999999999 89999999999999874
No 39
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.2e-34 Score=255.93 Aligned_cols=208 Identities=21% Similarity=0.207 Sum_probs=182.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHHc-ChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQK-DRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+|+||.|++.|+.+.|+.|+.. +.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 100 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNC---HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACS 100 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTC---CCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCc---ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHH
Confidence 5899999999999999999986 4444 445889999999999999999999999999998 8999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccc------------------
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLN------------------ 142 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~------------------ 142 (316)
.|+.++ +++|++ .+.+++..|..|+||||+|+.+|+.+++++|+++|+++...+
T Consensus 101 ~g~~~i-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 101 YGHYEV-------TELLLK-HGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHH
T ss_pred CCCHHH-------HHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHH
Confidence 999988 999999 899999999999999999999999999999999999832211
Q ss_pred ---------------------------------cccCCCCcHHHHHHhcCC---cceec-------ccccccCCCCCHHH
Q 036662 143 ---------------------------------AKDDYGMSILHLAVADKQ---IEYYN-------QSECCYANGFTAWD 179 (316)
Q Consensus 143 ---------------------------------~~d~~g~t~Lh~A~~~~~---~~~v~-------~~~~~~~~g~TpL~ 179 (316)
..+..|+||||+|+..++ .++++ +++.+|.+|.||||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 252 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLH 252 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred HHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHH
Confidence 234678899999999855 45555 88999999999999
Q ss_pred HHHhccCCCcHHHHHHHHHHhCCCcccccCCccccccccccCcccc
Q 036662 180 ILANSKRKMKDWEIGELLRRAGAISAKEMQQPATKVSITQTNSLTS 225 (316)
Q Consensus 180 ~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~ 225 (316)
+|+. .++.+++++|+++|++.+.....+.++...+.......
T Consensus 253 ~A~~----~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~ 294 (351)
T 3utm_A 253 VAAE----RAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQ 294 (351)
T ss_dssp HHHH----TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHH----cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 9999 89999999999999999988888888887665544333
No 40
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7.2e-34 Score=253.36 Aligned_cols=198 Identities=18% Similarity=0.062 Sum_probs=163.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHH------------------------------hhhcCCCCCCHHHHHHhcCCH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILE------------------------------RAAMNCPSETPLHVAALLRHK 50 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~------------------------------~~~~~~~g~t~Lh~A~~~g~~ 50 (316)
+.||||+|+..|+.++|++|+++|+++.. .+..|..|.||||+|+..|+.
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 46999999999999999999998875432 123567889999999999999
Q ss_pred HHHHHHHhhCCCcc---------cccCCCCCcHHHHHHHcCCccc-------------------------------cccc
Q 036662 51 DFAKEILRQKPGIA---------GELDSRKSSALHIASQKRYVGM-------------------------------KSNR 90 (316)
Q Consensus 51 ~~v~~Ll~~~~~~~---------~~~d~~g~tpLh~A~~~g~~~~-------------------------------~~~~ 90 (316)
+++++|+++|+++. ...+..|.||||+|+..|+.++ ..+.
T Consensus 139 ~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~ 218 (337)
T 4g8k_A 139 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 218 (337)
T ss_dssp HHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTH
T ss_pred HHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccH
Confidence 99999999988762 1235668899999999888876 1222
Q ss_pred HHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhc-CCCccccccccCCCCcHHHHHHhcCCcceec--cc
Q 036662 91 IDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLEN-TDDSEFLNAKDDYGMSILHLAVADKQIEYYN--QS 167 (316)
Q Consensus 91 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~--~~ 167 (316)
.+++++|++ ++++++.+|.+|+||||+|+..|+.++++.|++. |++ +|.+|.+|+||||+|+..|+.++++ --
T Consensus 219 ~~i~~lLl~-~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~---vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 294 (337)
T 4g8k_A 219 EAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE---INDTDSDGKTALLLAVELKLKKIAELLCK 294 (337)
T ss_dssp HHHHHHHHH-TTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc---ccCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 457888888 8999999999999999999999999999999985 788 9999999999999999999999999 11
Q ss_pred ccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCccc
Q 036662 168 ECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAK 206 (316)
Q Consensus 168 ~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~ 206 (316)
.-.|.++.||||+|+. .++.+++++|+++||+++.
T Consensus 295 ~GAd~n~~~~L~~A~~----~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 295 RGASTDCGDLVMTARR----NYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp TSCSSTTCCHHHHHHH----TTCHHHHHHHHHTTCCC--
T ss_pred CCCCCCCCCHHHHHHH----cCCHHHHHHHHHCcCCCCC
Confidence 1224456789999999 8999999999999999864
No 41
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2e-34 Score=259.68 Aligned_cols=188 Identities=15% Similarity=0.083 Sum_probs=172.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhh----CCCcccc----------
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQ----KPGIAGE---------- 66 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~----~~~~~~~---------- 66 (316)
+.||||+|+..|+.++|++|++.++++ .+..|.||||+|+..|+.+++++|+++ |+++ +.
T Consensus 53 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~ 126 (364)
T 3ljn_A 53 GCTALHLACKFGCVDTAKYLASVGEVH-----SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMP-ESLLNECDEREV 126 (364)
T ss_dssp CCCHHHHHHHHCCHHHHHHHHHHCCCC-----CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCE
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCc-----cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhcchHhh
Confidence 479999999999999999999999844 245899999999999999999999999 8776 55
Q ss_pred -------cCCCCCcHHHHHHHcC--CcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 036662 67 -------LDSRKSSALHIASQKR--YVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDD 137 (316)
Q Consensus 67 -------~d~~g~tpLh~A~~~g--~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~ 137 (316)
.|..|.||||+|+..| +.++ +++|++ .+++++.+|..|+||||+|+.+|+.+++++|+++|++
T Consensus 127 ~~~~~~~~~~~g~t~L~~A~~~g~~~~~~-------v~~Ll~-~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 127 NEIGSHVKHCKGQTALHWCVGLGPEYLEM-------IKILVQ-LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp EEETTEEEEESCCCHHHHHHHSCGGGHHH-------HHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSC
T ss_pred hhhccccCCCCCCCHHHHHHHcCCchHHH-------HHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 8889999999999999 8888 999999 6899999999999999999999999999999998876
Q ss_pred c--cccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCccc
Q 036662 138 S--EFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAK 206 (316)
Q Consensus 138 ~--~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~ 206 (316)
. ..+|.+|..|+||||+|+..|+.++++ +++.+|..|.||||+|+. .++.+++++|+++|++...
T Consensus 199 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~~~~~~~ 272 (364)
T 3ljn_A 199 KSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVR----AAMVLLTKELLQKTDVFLI 272 (364)
T ss_dssp SSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH----TCCHHHHHHHHHHSCHHHH
T ss_pred cccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH----hChHHHHHHHHHcCCchhh
Confidence 2 237889999999999999999999999 899999999999999999 8999999999999988643
No 42
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.3e-34 Score=240.23 Aligned_cols=187 Identities=17% Similarity=0.142 Sum_probs=171.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+.||||.|+..|+.+++++|+++++++... .+..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+.
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 118 (240)
T 3eu9_A 42 NVTLLHWAAINNRIDLVKYYISKGAIVDQL--GGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQ 118 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCcchhh--cCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHH
Confidence 468999999999999999999999876433 3556999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCC-HHHHHHHHhcCCCccccccccC-CCCcHHHHHHhc
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQ-LEALKVLLENTDDSEFLNAKDD-YGMSILHLAVAD 158 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~~v~~Ll~~g~~~~~~~~~d~-~g~t~Lh~A~~~ 158 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+..++ .+++++|++.|++ ++.++. .|+||||+|+..
T Consensus 119 ~~~~~~-------~~~Ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~---~~~~~~~~g~t~L~~A~~~ 187 (240)
T 3eu9_A 119 FGHTSI-------VAYLIA-KGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS---VNLGDKYHKNTALHWAVLA 187 (240)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC---TTCCCTTTCCCHHHHHHHH
T ss_pred cCHHHH-------HHHHHh-cCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC---cchhhccCCCcHHHHHHHc
Confidence 999988 999999 888999999999999999997776 8999999999999 999987 999999999999
Q ss_pred CCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcc
Q 036662 159 KQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISA 205 (316)
Q Consensus 159 ~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~ 205 (316)
|+.++++ +++.+|..|.||||+|+. .++.+++++|+++|++..
T Consensus 188 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~----~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 188 GNTTVISLLLEAGANVDAQNIKGESALDLAKQ----RKNVWMINHLQEARQAKG 237 (240)
T ss_dssp TCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHhhhccC
Confidence 9999998 899999999999999999 899999999999998874
No 43
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3e-34 Score=248.75 Aligned_cols=169 Identities=18% Similarity=0.145 Sum_probs=145.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCc-----------------
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGI----------------- 63 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----------------- 63 (316)
+.||||+|+..|+.++|+.|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 121 (282)
T 1oy3_D 45 GQTALHLAAILGEASTVEKLYAAGAGV---LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121 (282)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCS---SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCc
Confidence 479999999999999999999999987 445889999999999999999999999988762
Q ss_pred -----------------------------ccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCC-CC
Q 036662 64 -----------------------------AGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIW-VE 113 (316)
Q Consensus 64 -----------------------------~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~-g~ 113 (316)
.+.+|..|.||||+|+..|+.++ +++|++ .+.+++..+.. |+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~-------v~~Ll~-~g~~~~~~~~~~g~ 193 (282)
T 1oy3_D 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEM-------VRLLRD-AGADLNKPEPTCGR 193 (282)
T ss_dssp ----------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-HTCCTTCCCTTTCC
T ss_pred chhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHH-------HHHHHH-cCCCCCCCCCCCCc
Confidence 26678999999999999999988 999999 78888888754 99
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHh
Q 036662 114 TILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILAN 183 (316)
Q Consensus 114 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~ 183 (316)
||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..|+.++++ +++.+|..|.|||++|..
T Consensus 194 tpL~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 194 TPLHLAVEAQAASVLELLLKAGAD---PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC---CcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 999999999999999999999999 9999999999999999999999999 899999999999999987
No 44
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.6e-34 Score=250.73 Aligned_cols=182 Identities=23% Similarity=0.223 Sum_probs=160.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+.||||.|+..|+.++|++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 148 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENGANI---NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEE 148 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHh
Confidence 469999999999999999999999987 445889999999999999999999999999998 8899999999999998
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcc--------------------------cccCCCCcHHHHHHhcCCHHHHHHHHhc
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAAS--------------------------APLIWVETILHLCVKHNQLEALKVLLEN 134 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~--------------------------~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 134 (316)
.|+.++ ++.++...+.+++ ..+..|.||||+|+.+|+.+++++|+++
T Consensus 149 ~~~~~~-------~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 221 (299)
T 1s70_B 149 EAMEEL-------LQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA 221 (299)
T ss_dssp HHHHHH-------HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred cchHHH-------HHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence 888777 7777665544433 3567899999999999999999999999
Q ss_pred CCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhC
Q 036662 135 TDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAG 201 (316)
Q Consensus 135 g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~g 201 (316)
|++ +|.+|.+|+||||+|+..|+.++++ +++.+|..|+||||+|.+ +..+.++.+++..
T Consensus 222 g~d---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~-----~~~~~l~~l~~~~ 287 (299)
T 1s70_B 222 RYD---VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE-----DILGYLEELQKKQ 287 (299)
T ss_dssp TCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS-----GGGHHHHHHHHHT
T ss_pred CCC---CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-----HHHHHHHHHHHHH
Confidence 999 9999999999999999999999998 899999999999999976 3445555555443
No 45
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=248.51 Aligned_cols=189 Identities=16% Similarity=0.144 Sum_probs=169.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCC-CcccccCCCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKP-GIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-~~~~~~d~~g~tpLh~A~~ 80 (316)
.+++|.|+..|+.+.++.+++.+.+. ..+.+|..|+||||+|+..|+.+++++|++.|+ ++ +..|..|.||||+|+.
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~-~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDY-VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKV-DKQNRAGYSPIMLTAL 154 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHH-HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHGGG
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhh-cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-CCCCCCCCCHHHHHHH
Confidence 47889999999999999999987663 235679999999999999999999999999999 55 9999999999999995
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.... ..++.++++.|++ .+...+..|..|+||||+|+.+|+.+++++|+++|++ +|.+|.+|+||||+|+..|+
T Consensus 155 ~~~~--~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad---~n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 155 ATLK--TQDDIETVLQLFR-LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEAD---VNVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp CCCC--SHHHHHHHHHHHH-HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTC
T ss_pred HHhh--hhhhHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCCCCHHHHHHHCCC
Confidence 4333 2345556999999 7788888899999999999999999999999999999 99999999999999999999
Q ss_pred cceec--------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCC
Q 036662 161 IEYYN--------QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGA 202 (316)
Q Consensus 161 ~~~v~--------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga 202 (316)
.++++ +++.+|.+|+||||+|+. .++.+++++|++++.
T Consensus 229 ~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 229 KEIAGLLLAVPSCDISLTDRDGSTALMVALD----AGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHHCC
T ss_pred HHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH----cCCHHHHHHHHhccC
Confidence 99988 789999999999999999 899999999998764
No 46
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5e-33 Score=224.02 Aligned_cols=150 Identities=23% Similarity=0.218 Sum_probs=135.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.||||.|+..|+.+.++.|++++++.. +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLV--NKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTG 79 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGG--GCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHT
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccc--cCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHC
Confidence 479999999999999999999988632 445889999999999999999999999999998 88999999999999999
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQI 161 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 161 (316)
|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.
T Consensus 80 ~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 80 GYTDI-------VGLLLE-RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD---LTTEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp TCHHH-------HHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCH
T ss_pred CCHHH-------HHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHhCcH
Confidence 99988 999999 8899999999999999999999999999999999999 888888888888888887665
Q ss_pred ceec
Q 036662 162 EYYN 165 (316)
Q Consensus 162 ~~v~ 165 (316)
++++
T Consensus 149 ~~~~ 152 (172)
T 3v30_A 149 KVQQ 152 (172)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 47
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-33 Score=251.09 Aligned_cols=196 Identities=16% Similarity=0.051 Sum_probs=161.6
Q ss_pred HHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCC
Q 036662 4 KLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRY 83 (316)
Q Consensus 4 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 83 (316)
.+|.|+..+..++++.|++.+.+++.+ +|..|+||||+|+..|+.++|++|+++|+++ +.+|..|+||||+|+..|+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~--~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIP--VDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSC--CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcc
Confidence 357788888889999999999887431 5899999999999999999999999999999 8999999999999999998
Q ss_pred ---cccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHh----cCCHHHHHHHHhc--------------------CC
Q 036662 84 ---VGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVK----HNQLEALKVLLEN--------------------TD 136 (316)
Q Consensus 84 ---~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~----~g~~~~v~~Ll~~--------------------g~ 136 (316)
.++ ++.|++...++++.+|..|+||||+|+. .|+.+++++|++. |+
T Consensus 177 ~~~~~~-------~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~ 249 (327)
T 1sw6_A 177 NYDSGT-------FEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKES 249 (327)
T ss_dssp HHHTTC-------HHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------
T ss_pred cccHHH-------HHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccC
Confidence 788 9999996667899999999999999999 8999999999987 77
Q ss_pred CccccccccCCCCcHHHHHHhcCCcceec--ccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCcccc
Q 036662 137 DSEFLNAKDDYGMSILHLAVADKQIEYYN--QSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATK 214 (316)
Q Consensus 137 ~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~--~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~ 214 (316)
+ ++.+|.+|.||||+|+. .+.+- +++.+|.+|+||||+|+. .++.+++++|+++|++++.....+.+|
T Consensus 250 ~---~~~~~~~g~t~L~~a~~---~~~Ll~~~~n~~d~~G~TpLh~A~~----~g~~~~v~~Ll~~Gad~~~~d~~G~Tp 319 (327)
T 1sw6_A 250 K---PNDKNGERKDSILENLD---LKWIIANMLNAQDSNGDTCLNIAAR----LGNISIVDALLDYGADPFIANKSGLRP 319 (327)
T ss_dssp -------------CHHHHHCS---HHHHHHHTTTCCCTTSCCHHHHHHH----HCCHHHHHHHHHTTCCTTCCCTTSCCG
T ss_pred C---cccccccCCChhHHHHH---HHHHHHhCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCcccCCCCCCH
Confidence 7 99999999999999986 22111 799999999999999999 899999999999999999998888888
Q ss_pred ccccc
Q 036662 215 VSITQ 219 (316)
Q Consensus 215 ~~~~~ 219 (316)
+.++.
T Consensus 320 L~~A~ 324 (327)
T 1sw6_A 320 VDFGA 324 (327)
T ss_dssp GGGTC
T ss_pred HHHHH
Confidence 76543
No 48
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=9.7e-33 Score=219.99 Aligned_cols=157 Identities=22% Similarity=0.238 Sum_probs=125.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
+||||.|+..|+.++++.|++++.++ +.+|..|+||||+|+. |+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNV---NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARA 80 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCT---TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCc---cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 57888888888888888888888776 3447888888888888 8888888888888887 77888888888888888
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQI 161 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 161 (316)
|+.++ +++|++ .+.+++.+|.+|+||||+|+..|+.+++++|+++|+++ ++.
T Consensus 81 ~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~------------------ 132 (162)
T 1ihb_A 81 GFLDT-------LQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN--VGH------------------ 132 (162)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC--TTC------------------
T ss_pred CCHHH-------HHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC--CCC------------------
Confidence 88877 888888 77888888888888888888888888888888888761 244
Q ss_pred ceecccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCC
Q 036662 162 EYYNQSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAI 203 (316)
Q Consensus 162 ~~v~~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~ 203 (316)
+|..|.||||+|+. .++.+++++|+++||+
T Consensus 133 --------~~~~g~t~l~~A~~----~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 133 --------RNHKGDTACDLARL----YGRNEVVSLMQANGAG 162 (162)
T ss_dssp --------CCTTSCCHHHHHHH----TTCHHHHHHHHHTC--
T ss_pred --------cCCCCCcHHHHHHH----cCCHHHHHHHHHhCCC
Confidence 44455556666666 6678889999999885
No 49
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=3.1e-32 Score=218.31 Aligned_cols=148 Identities=22% Similarity=0.201 Sum_probs=126.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.++++.|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVI---NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACS 78 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCc---CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 468999999999999999999988776 445888999999999999999999999999988 8888999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+
T Consensus 79 ~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 79 KGYTDI-------VKMLLD-CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD---PTIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp HTCHHH-------HHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTC
T ss_pred cCCHHH-------HHHHHH-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCc
Confidence 888888 999998 7888888899999999999999999999999999888 77777777777777776655
Q ss_pred cce
Q 036662 161 IEY 163 (316)
Q Consensus 161 ~~~ 163 (316)
.++
T Consensus 148 ~~~ 150 (167)
T 3v31_A 148 RSV 150 (167)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 50
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.98 E-value=1.5e-32 Score=225.29 Aligned_cols=155 Identities=19% Similarity=0.154 Sum_probs=145.2
Q ss_pred hhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccC
Q 036662 31 AAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLI 110 (316)
Q Consensus 31 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~ 110 (316)
+.+|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.++ +++|++ .+.+++.+|.
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~ 99 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGI-------AEKLLS-KGSNVNTKDF 99 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-HTCCTTCCCT
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHH-------HHHHHH-CCCCCCCCCC
Confidence 446889999999999999999999999999998 8889999999999999999888 999999 7788999999
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHh
Q 036662 111 WVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILAN 183 (316)
Q Consensus 111 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~ 183 (316)
.|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++ +++.+|..|.||||+|+.
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 176 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHGAN---VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARI 176 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC---SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999988 889999999999999999
Q ss_pred ccCCCcHHHHHHHHHHhC
Q 036662 184 SKRKMKDWEIGELLRRAG 201 (316)
Q Consensus 184 ~~~~~~~~~i~~~Ll~~g 201 (316)
.++.+++++|+++|
T Consensus 177 ----~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 177 ----FGRQEVIKIFTEVR 190 (192)
T ss_dssp ----TTCHHHHHHHHHHH
T ss_pred ----hCcHHHHHHHHhcc
Confidence 89999999999876
No 51
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=2.4e-32 Score=215.91 Aligned_cols=148 Identities=20% Similarity=0.289 Sum_probs=139.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
+|+||.|++.|+.+++++|+++++++. .+..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT----TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC----CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 589999999999999999999998652 4788999999999999999999999999998 88999999999999999
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQI 161 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 161 (316)
|+.++ +++|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.
T Consensus 78 ~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 78 GHANI-------VEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD---VHTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp TCHHH-------HHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH
T ss_pred ChHHH-------HHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCH
Confidence 99988 999999 8999999999999999999999999999999999999 999999999999999999988
Q ss_pred ceec
Q 036662 162 EYYN 165 (316)
Q Consensus 162 ~~v~ 165 (316)
++++
T Consensus 147 ~i~~ 150 (153)
T 1awc_B 147 DLAE 150 (153)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 52
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.98 E-value=3.7e-32 Score=222.93 Aligned_cols=150 Identities=19% Similarity=0.119 Sum_probs=142.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 110 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFDKL---EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSII 110 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccc---ccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHH
Confidence 479999999999999999999998876 445889999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+
T Consensus 111 ~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 111 FGYSEM-------SYFLLE-HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD---ISARDLTGLTAEASARIFGR 179 (192)
T ss_dssp HTCHHH-------HHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTC
T ss_pred cCCHHH-------HHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhCc
Confidence 999988 999999 8999999999999999999999999999999999999 99999999999999999999
Q ss_pred cceec
Q 036662 161 IEYYN 165 (316)
Q Consensus 161 ~~~v~ 165 (316)
.++++
T Consensus 180 ~~~v~ 184 (192)
T 2rfm_A 180 QEVIK 184 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.98 E-value=9.2e-32 Score=216.21 Aligned_cols=147 Identities=25% Similarity=0.361 Sum_probs=115.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.++|++|++.|+.++|++|++++.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADV---NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALF 90 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 36788888888888888888888766 334777888888888888888888888888887 77788888888888888
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQI 161 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 161 (316)
|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.
T Consensus 91 ~~~~~-------~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 91 GHLEI-------VEVLLK-NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD---VNAQDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH
T ss_pred CCHHH-------HHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHhCCH
Confidence 87777 888888 7777888888888888888888888888888888887 777777777776666665554
Q ss_pred ce
Q 036662 162 EY 163 (316)
Q Consensus 162 ~~ 163 (316)
++
T Consensus 160 ~~ 161 (169)
T 2y1l_E 160 DL 161 (169)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=2.6e-32 Score=219.86 Aligned_cols=162 Identities=19% Similarity=0.146 Sum_probs=147.8
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHH
Q 036662 37 SETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETIL 116 (316)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~L 116 (316)
+.||||.|+..|+.++++.|++.+++..+.+|..|.||||+|+..|+.++ +++|++ .+.+++.+|..|+|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L 73 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIET-------VRFLLE-WGADPHILAKERESAL 73 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-HTCCTTCCCTTCCCHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCCchhhcccCCCHH
Confidence 56899999999999999999999999669999999999999999999988 999999 7888999999999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCc
Q 036662 117 HLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMK 189 (316)
Q Consensus 117 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~ 189 (316)
|+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++ +++.+|..|.||||+|+. .+
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~----~~ 146 (172)
T 3v30_A 74 SLASTGGYTDIVGLLLERDVD---INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVA----LG 146 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----HT
T ss_pred HHHHHCCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH----hC
Confidence 999999999999999999999 9999999999999999999999998 899999999999999999 89
Q ss_pred HHHHHHHHHHhCCCcccccCCccc
Q 036662 190 DWEIGELLRRAGAISAKEMQQPAT 213 (316)
Q Consensus 190 ~~~i~~~Ll~~ga~~~~~~~~~~~ 213 (316)
+.+++++|+++|++.......+.+
T Consensus 147 ~~~~~~~L~~~~~~~~~~~~~~~~ 170 (172)
T 3v30_A 147 YRKVQQVIENHILKLFQSNLVPAD 170 (172)
T ss_dssp CHHHHHHHHHHHHHHSCC------
T ss_pred cHHHHHHHHHHHHHHhcccCCCCC
Confidence 999999999999988766554443
No 55
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=4.3e-32 Score=217.53 Aligned_cols=156 Identities=15% Similarity=0.138 Sum_probs=148.3
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcH
Q 036662 36 PSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETI 115 (316)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~ 115 (316)
.|.||||.|+..|+.++++.|++.|+++ +.+|..|.||||+|+..|+.++ +++|++ .+.+++..|..|+||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~ 72 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAV-------VEFLLQ-NGADPQLLGKGRESA 72 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCTTCCCH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHH-------HHHHHH-cCCCCCCcCCCCCcH
Confidence 5899999999999999999999999997 8999999999999999999988 999999 789999999999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCC
Q 036662 116 LHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKM 188 (316)
Q Consensus 116 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~ 188 (316)
||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++ +++.+|..|.||||+|+. .
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~----~ 145 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCGVD---VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVA----L 145 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----H
T ss_pred HHHHHHcCCHHHHHHHHHCCCC---CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH----c
Confidence 9999999999999999999999 9999999999999999999999998 889999999999999999 8
Q ss_pred cHHHHHHHHHHhCCCcccc
Q 036662 189 KDWEIGELLRRAGAISAKE 207 (316)
Q Consensus 189 ~~~~i~~~Ll~~ga~~~~~ 207 (316)
++.+++++|++++++...+
T Consensus 146 ~~~~~~~~L~~~~~~~~~~ 164 (167)
T 3v31_A 146 GYRSVQQVIESHLLKLLQN 164 (167)
T ss_dssp TCHHHHHHHHHHHHHHCSS
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 9999999999998876543
No 56
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=3.6e-32 Score=237.07 Aligned_cols=190 Identities=12% Similarity=-0.005 Sum_probs=166.1
Q ss_pred HHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCccccc
Q 036662 9 ALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKS 88 (316)
Q Consensus 9 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~ 88 (316)
+...+.+.+..+|..+ ++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.. +|+||||+|+..|+.++
T Consensus 7 i~~~~~~~v~~lL~~~-~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~-- 77 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK-DT---FKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKI-- 77 (285)
T ss_dssp GGGCCHHHHHHHHHST-TT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHH--
T ss_pred HHhcCHHHHHHHHHhC-CC---CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHH--
Confidence 4456666666766655 33 456999999999999999999999999999998 655 49999999999999998
Q ss_pred ccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCC-CcHHHHHHhcCCcceec--
Q 036662 89 NRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYG-MSILHLAVADKQIEYYN-- 165 (316)
Q Consensus 89 ~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g-~t~Lh~A~~~~~~~~v~-- 165 (316)
+++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..| .||||+|+..|+.++++
T Consensus 78 -----v~~Ll~-~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~~t~L~~A~~~~~~~~v~~L 148 (285)
T 3kea_A 78 -----VKILLF-SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR---LMFYGKTGWKTSFYHAVMLNDVSIVSYF 148 (285)
T ss_dssp -----HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG---GGGCSSSGGGSHHHHHHHTTCHHHHHHH
T ss_pred -----HHHHHH-CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC---CCccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999 8999999999999999999999999999999999999 99999999 89999999999999998
Q ss_pred ---ccccccC-CCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccCCcccc-cccccc
Q 036662 166 ---QSECCYA-NGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQQPATK-VSITQT 220 (316)
Q Consensus 166 ---~~~~~~~-~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~-~~~~~~ 220 (316)
..+..+. .|.||||+|+. .++.+++++|+++|++.+.....+.++ ...+..
T Consensus 149 l~~g~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 149 LSEIPSTFDLAILLSCIHITIK----NGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAID 204 (285)
T ss_dssp HTTSCTTCCCSTHHHHHHHHHH----TTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHH
T ss_pred HhCCCccccccCCccHHHHHHH----cChHHHHHHHHHcCCCCCcccCCCCChHHHHHHH
Confidence 2333444 89999999999 899999999999999999888777776 554443
No 57
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.8e-31 Score=214.46 Aligned_cols=152 Identities=24% Similarity=0.247 Sum_probs=143.7
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVE 113 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~ 113 (316)
...+.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.++ +++|++ .+.+++..|..|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~g~ 81 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEI-------VEVLLK-NGADVNAVDHAGM 81 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCTTSC
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCCCCccCCCCC
Confidence 566789999999999999999999999998 8899999999999999999988 999999 8889999999999
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccC
Q 036662 114 TILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKR 186 (316)
Q Consensus 114 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~ 186 (316)
||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++ +++.+|..|.||||+|+.
T Consensus 82 t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~--- 155 (169)
T 2y1l_E 82 TPLRLAALFGHLEIVEVLLKNGAD---VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISID--- 155 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH---
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH---
Confidence 999999999999999999999999 9999999999999999999999998 889999999999999999
Q ss_pred CCcHHHHHHHHHHhC
Q 036662 187 KMKDWEIGELLRRAG 201 (316)
Q Consensus 187 ~~~~~~i~~~Ll~~g 201 (316)
.++.+++++|++.|
T Consensus 156 -~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 156 -NGNEDLAEILQKLN 169 (169)
T ss_dssp -TTCHHHHHHHHTC-
T ss_pred -hCCHHHHHHHHHcC
Confidence 89999999999876
No 58
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=6.4e-34 Score=240.31 Aligned_cols=178 Identities=16% Similarity=0.012 Sum_probs=159.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.||||.|+..|+.++|+.|++.++++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~ 97 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMNDP---SQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASC 97 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHT
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 47899999999999999999999887 445899999999999999999999999999998 89999999999999999
Q ss_pred CCcccccccHHHHHHHHHhCCCCccccc-CCCCcHHHHH--HhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPL-IWVETILHLC--VKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVAD 158 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d-~~g~t~Lh~A--~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~ 158 (316)
|+.++ +++|++ .+.+++..+ .+|+||||+| +..|+.+++++|++.|++ ++.+|..|.||+|.++..
T Consensus 98 g~~~~-------v~~Ll~-~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 98 NDTVI-------CMALVQ-HGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS---MGLMNSGAVYALWDYSAE 166 (229)
T ss_dssp TCHHH-------HHHHHT-TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH---TTTSGGGEEEESSCBCCS
T ss_pred CCHHH-------HHHHHH-cCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC---cccccCCchHHHHHHhhc
Confidence 99988 999999 888888886 6999999999 999999999999999999 999999999999976665
Q ss_pred CCcceec------ccccccCCCCCHHHHHHhccCCCcHHHHHHHHH
Q 036662 159 KQIEYYN------QSECCYANGFTAWDILANSKRKMKDWEIGELLR 198 (316)
Q Consensus 159 ~~~~~v~------~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll 198 (316)
...+++- +++.+|.+|+||||+|+. .++.++++.++
T Consensus 167 ~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~----~g~~~~v~~~~ 208 (229)
T 2vge_A 167 FGDELSFREGESVTVLRRDGPEETDWWWAAL----HGQEGYVPRNY 208 (229)
T ss_dssp STTBCCBCTTCEEEEEESSCTTCSSEEEEEE----TTEEEEEEGGG
T ss_pred cccccCccccccccccccCCCcccHHHHHHH----cCCcceeehhh
Confidence 5444433 488899999999999999 77777776543
No 59
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=2.4e-31 Score=215.71 Aligned_cols=164 Identities=13% Similarity=0.103 Sum_probs=131.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.++||.|+..|+.++|+.|++++... .+..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTEND--LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASH 82 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHc
Confidence 47888888888888888888875421 1345778888888888888888888888888887 77888888888888888
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCc
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQI 161 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 161 (316)
|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|
T Consensus 83 ~~~~~-------v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A------ 145 (179)
T 3f6q_A 83 GHRDI-------VQKLLQ-YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL---VSICNKYGEMPVDKA------ 145 (179)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SSBCCTTSCCGGGGS------
T ss_pred CCHHH-------HHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---cchhccCCCCcHHHH------
Confidence 88877 888888 7888888888888888888888888888888888887 666666555555544
Q ss_pred ceecccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccccC
Q 036662 162 EYYNQSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKEMQ 209 (316)
Q Consensus 162 ~~v~~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~~~ 209 (316)
+. .++.+++++|+++|++.+....
T Consensus 146 --------------------~~----~~~~~~~~~L~~~g~~~~~~~~ 169 (179)
T 3f6q_A 146 --------------------KA----PLRELLRERAEKMGQNLNRIPY 169 (179)
T ss_dssp --------------------CH----HHHHHHHHHHHHTTCCCSCBCC
T ss_pred --------------------HH----HHHHHHHHHHHHhhcCcccCCc
Confidence 44 5678899999999999976443
No 60
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=3.8e-31 Score=223.11 Aligned_cols=172 Identities=19% Similarity=0.151 Sum_probs=151.2
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhh-CCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCc-----cccc
Q 036662 36 PSETPLHVAALLRHKDFAKEILRQ-KPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAA-----SAPL 109 (316)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~-----~~~d 109 (316)
.|+||||+|+..|+.++++.|++. |.++ +.+|..|+||||+|+..|+.++ +++|++ .+.++ +..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~-------v~~Ll~-~~~~~~~~~~~~~~ 72 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEA-------AMVLME-AAPELVFEPMTSEL 72 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-HCGGGGGCCCCSTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCchhccccccccC
Confidence 589999999999999999999998 8888 8899999999999999999988 999999 44443 5667
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccC-------------CCCcHHHHHHhcCCcceec-------cccc
Q 036662 110 IWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDD-------------YGMSILHLAVADKQIEYYN-------QSEC 169 (316)
Q Consensus 110 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~-------------~g~t~Lh~A~~~~~~~~v~-------~~~~ 169 (316)
..|+||||+|+.+|+.+++++|+++|++ ++.++. +|+||||+|+..|+.++++ +++.
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 149 (232)
T 2rfa_A 73 YEGQTALHIAVINQNVNLVRALLARGAS---VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA 149 (232)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHhCCCC---CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 8999999999999999999999999999 776655 8999999999999999999 8999
Q ss_pred ccCCCCCHHHHHHhccCCCcHHHHH----HHHHHhCCCc------ccccCCccccccccccCcc
Q 036662 170 CYANGFTAWDILANSKRKMKDWEIG----ELLRRAGAIS------AKEMQQPATKVSITQTNSL 223 (316)
Q Consensus 170 ~~~~g~TpL~~a~~~~~~~~~~~i~----~~Ll~~ga~~------~~~~~~~~~~~~~~~~~~~ 223 (316)
+|.+|+||||+|+. .++.+++ ++|+++|++. +.....+.+|...+.....
T Consensus 150 ~d~~g~t~L~~A~~----~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 150 QDSLGNTVLHILIL----QPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp CCTTSCCHHHHHHT----CSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHH----cCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 99999999999999 7787777 9999999987 3556666777665544433
No 61
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=9.7e-32 Score=227.55 Aligned_cols=169 Identities=18% Similarity=0.133 Sum_probs=153.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCc-----ccccCCCCCcHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGI-----AGELDSRKSSAL 75 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-----~~~~d~~g~tpL 75 (316)
+.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|+++ .+..|..|.|||
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 121 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGCDP---ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 121 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCS---CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHH
Confidence 469999999999999999999999887 445889999999999999999999999999752 477889999999
Q ss_pred HHHHHcCCcccccccHHHHHHHHHhCCCCcccccC-CCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHH
Q 036662 76 HIASQKRYVGMKSNRIDVLEELVRARPLAASAPLI-WVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHL 154 (316)
Q Consensus 76 h~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~ 154 (316)
|+|+..|+.++ +++|++ .+.+++.++. .|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 122 ~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~ 190 (236)
T 1ikn_D 122 HLASIHGYLGI-------VELLVS-LGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD---VNRVTYQGYSPYQL 190 (236)
T ss_dssp HHHHHTTCHHH-------HHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC---SCCCCTTCCCGGGG
T ss_pred HHHHHcCCHHH-------HHHHHH-cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcccCCCCCHHHH
Confidence 99999999988 999999 8888999887 999999999999999999999999999 99999999999999
Q ss_pred HHhcCCcceec-------c--cccccCCCCCHHHHHHh
Q 036662 155 AVADKQIEYYN-------Q--SECCYANGFTAWDILAN 183 (316)
Q Consensus 155 A~~~~~~~~v~-------~--~~~~~~~g~TpL~~a~~ 183 (316)
|+..++.++++ + ....+..|.||.+.+..
T Consensus 191 A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 191 TWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp CTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred HHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 99999999998 3 34788899999887655
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=7.2e-31 Score=207.87 Aligned_cols=147 Identities=23% Similarity=0.308 Sum_probs=132.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcC-hhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKD-RLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+||||.|+..|+.+.++.|+++. .++ +..|..|.||||+ +..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~---~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHP---DALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCT---TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCc---cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH
Confidence 58999999999999999999982 144 4468899999999 9999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+.+|+.+++++|++. ++ ++.+|.+|+||||+|+..|+
T Consensus 78 ~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~---~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 78 TGFLDT-------LKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD---LHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp TTCHHH-------HHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC---TTCCCTTSCCHHHHHHHSCC
T ss_pred cCcHHH-------HHHHHH-cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC---CCCcCCCCCCHHHHHHHcCc
Confidence 999888 999999 8899999999999999999999999999999998 77 88888888888888888877
Q ss_pred cceec
Q 036662 161 IEYYN 165 (316)
Q Consensus 161 ~~~v~ 165 (316)
.++++
T Consensus 146 ~~~v~ 150 (156)
T 1bd8_A 146 QDLVD 150 (156)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=2.4e-31 Score=212.74 Aligned_cols=142 Identities=24% Similarity=0.278 Sum_probs=117.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
+|+||.|++.|+.++++.|++.+.. .....+..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSV--NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTT--TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCC--CccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHc
Confidence 5788999999999999998886542 12334677889999999999999999999999887 88888899999999988
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHh
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVA 157 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~ 157 (316)
|+.++ +++|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+.
T Consensus 86 ~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 86 GHYEV-------AELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD---PTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCTGGGSCT
T ss_pred CcHHH-------HHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCChhHhHhc
Confidence 88887 899888 8888888888899999999999999999999998888 77777777777766543
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=4.6e-31 Score=211.04 Aligned_cols=153 Identities=22% Similarity=0.236 Sum_probs=141.4
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVE 113 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~ 113 (316)
|.+|.||||.|+..|+.++++.|++.++...+..|..|.||||+|+..|+.++ +++|++ .+.+++.+|..|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~g~ 76 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV-------VEYLLQ-HGADVHAKDKGGL 76 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCTTSC
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHH-------HHHHHh-cCCCCCccCCCCC
Confidence 67789999999999999999999997665558889999999999999999988 999999 8899999999999
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccC
Q 036662 114 TILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKR 186 (316)
Q Consensus 114 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~ 186 (316)
||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++ +++.+|.+|+||||+|..
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~--- 150 (165)
T 3twr_A 77 VPLHNACSYGHYEVAELLVKHGAV---VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD--- 150 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT---
T ss_pred CHHHHHHHcCcHHHHHHHHhCCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc---
Confidence 999999999999999999999999 9999999999999999999999999 899999999999999765
Q ss_pred CCcHHHHHHHHHHhCC
Q 036662 187 KMKDWEIGELLRRAGA 202 (316)
Q Consensus 187 ~~~~~~i~~~Ll~~ga 202 (316)
++.+++++|+++||
T Consensus 151 --~~~~i~~~L~~~gA 164 (165)
T 3twr_A 151 --GDTDIQDLLRGDAA 164 (165)
T ss_dssp --TCHHHHHHHHTC--
T ss_pred --CChHHHHHHhhccc
Confidence 66799999999986
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=9.4e-31 Score=212.21 Aligned_cols=132 Identities=20% Similarity=0.128 Sum_probs=68.1
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcH
Q 036662 36 PSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETI 115 (316)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~ 115 (316)
++.++||.|+..|+.++++.|++.++...+..|..|.||||+|+..|+.++ +++|++ .+.+++.+|..|+||
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~ 75 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAV-------VEMLIM-RGARINVMNRGDDTP 75 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCTTCCCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHH-------HHHHHH-cCCCCCCcCCCCCCH
Confidence 344555555555555555555555333234555555555555555555544 555555 445555555555555
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHH
Q 036662 116 LHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAW 178 (316)
Q Consensus 116 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL 178 (316)
||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++ +++.+|..|.|||
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 142 (179)
T 3f6q_A 76 LHLAASHGHRDIVQKLLQYKAD---INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 142 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGG
T ss_pred HHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcH
Confidence 5555555555555555555555 5555555555555555555555554 4555555555553
No 66
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=3.7e-30 Score=212.15 Aligned_cols=174 Identities=21% Similarity=0.200 Sum_probs=155.5
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCC-CcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKP-GIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWV 112 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g 112 (316)
+..+.||||.|+..|+.+.++.|++.++ ++ +..|..|.||||+|+..|+.++ +++|++ .+.+++.+|..|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~g 72 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQV-DEVDTEGNTPLNIAVHNNDIEI-------AKALID-RGADINLQNSIS 72 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCT-TCCCTTSCCHHHHHHHHTCHHH-------HHHHHH-TTCCTTCCCTTS
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCC-CCCCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCCCCCCCCCC
Confidence 4578999999999999999999999988 55 8899999999999999999988 999999 899999999999
Q ss_pred CcHHHHHHhcCCHHHHHHHH-hcCCCccccccccCCCCcHHHHHHhcCCcceec--------ccccccCCCCCHHHHHHh
Q 036662 113 ETILHLCVKHNQLEALKVLL-ENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN--------QSECCYANGFTAWDILAN 183 (316)
Q Consensus 113 ~t~Lh~A~~~g~~~~v~~Ll-~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~--------~~~~~~~~g~TpL~~a~~ 183 (316)
+||||+|+..|+.+++++|+ ..+.+ ++.+|..|+||||+|+..|+.++++ +++.+|..|.||||+|+.
T Consensus 73 ~t~l~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 73 DSPYLYAGAQGRTEILAYMLKHATPD---LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVG 149 (201)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCCC---TTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccCcc---cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHH
Confidence 99999999999999999999 55667 9999999999999999999999998 788999999999999998
Q ss_pred ccC-CCcHHHHHHHHHHhCCCcccccCCccccccccc
Q 036662 184 SKR-KMKDWEIGELLRRAGAISAKEMQQPATKVSITQ 219 (316)
Q Consensus 184 ~~~-~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~ 219 (316)
... ..++.+++++|+++|++.+.....+.++...+.
T Consensus 150 ~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 186 (201)
T 3hra_A 150 LREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYAN 186 (201)
T ss_dssp SSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred hccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHH
Confidence 321 112389999999999999988887777765543
No 67
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=3.9e-31 Score=226.54 Aligned_cols=154 Identities=21% Similarity=0.227 Sum_probs=140.3
Q ss_pred CCcHHHHHHHc---CCHHHHHHHHHcChhhHHhh--------hcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCC
Q 036662 1 MESKLYEAALA---GSVTSLLEFLQKDRLILERA--------AMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDS 69 (316)
Q Consensus 1 m~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~--------~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 69 (316)
++||||+|+.. |+.++|+.|++.++++.... ..|..|.||||+|+..|+.+++++|+++|+++ +.+|.
T Consensus 43 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~ 121 (256)
T 2etb_A 43 GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRAC 121 (256)
T ss_dssp TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCC
T ss_pred CCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Ccccc
Confidence 47999999999 99999999999998764221 23467999999999999999999999999998 77777
Q ss_pred C-------------CCcHHHHHHHcCCcccccccHHHHHHHHHh--CCCCcccccCCCCcHHHHHHh--cCCHH------
Q 036662 70 R-------------KSSALHIASQKRYVGMKSNRIDVLEELVRA--RPLAASAPLIWVETILHLCVK--HNQLE------ 126 (316)
Q Consensus 70 ~-------------g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~--~~~~~~~~d~~g~t~Lh~A~~--~g~~~------ 126 (316)
. |.||||+|+..|+.++ +++|++. .+++++.+|.+|+||||+|+. +++.+
T Consensus 122 ~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~-------v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~ 194 (256)
T 2etb_A 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDV-------VTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVI 194 (256)
T ss_dssp SGGGSCCSSSCCCSCSSHHHHHHHTTCHHH-------HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHH-------HHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHH
Confidence 6 9999999999999988 9999996 788999999999999999999 88888
Q ss_pred -HHHHHHhcCCCcccc-------ccccCCCCcHHHHHHhcCCcceec
Q 036662 127 -ALKVLLENTDDSEFL-------NAKDDYGMSILHLAVADKQIEYYN 165 (316)
Q Consensus 127 -~v~~Ll~~g~~~~~~-------~~~d~~g~t~Lh~A~~~~~~~~v~ 165 (316)
++++|+++|++ + +.+|.+|+||||+|+..|+.++++
T Consensus 195 ~iv~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 238 (256)
T 2etb_A 195 HMYDGLLQMGAR---LCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238 (256)
T ss_dssp HHHHHHHHHHHH---HSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHcCCC---cccccccccccCCCCCCHHHHHHHhCCHHHHH
Confidence 99999999998 7 899999999999999999999887
No 68
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2e-30 Score=208.41 Aligned_cols=130 Identities=25% Similarity=0.271 Sum_probs=119.0
Q ss_pred CHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHH
Q 036662 39 TPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHL 118 (316)
Q Consensus 39 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~ 118 (316)
++|+.||..|+.++|+.||++|+++ +.+|.+|+||||+|+..++.++ ++.|++ .+.+++.+|.+|+||||+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~-------~~~ll~-~gad~~~~d~~g~TpLh~ 76 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEV-------VKLLIS-KGADVNAKDSDGRTPLHH 76 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHH-------HHHHHh-cccchhhhccCCCCHHHH
Confidence 4699999999999999999999998 9999999999999999999998 999999 899999999999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHH
Q 036662 119 CVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDI 180 (316)
Q Consensus 119 A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~ 180 (316)
|+.+|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++++ +++.+|.+|+||||+
T Consensus 77 A~~~g~~~~v~~Ll~~gad---vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 77 AAENGHKEVVKLLISKGAD---VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDL 142 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHcCCHHHHHHHHHCcCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 9999999999999999999 9999999999999999888777666 666667777777663
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.5e-30 Score=204.31 Aligned_cols=144 Identities=25% Similarity=0.237 Sum_probs=137.1
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHH
Q 036662 37 SETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETIL 116 (316)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~L 116 (316)
..||||.|+..|+.+++++|+++|+++ + .|..|.||||+|+..|+.++ +++|++ .+.+++.+|..|+|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~L 71 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFST-------TEVLLR-AGVSRDARTKVDRTPL 71 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHH-------HHHHHT-TTCCTTCCCTTCCCHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCCCCCCCCCCCCHH
Confidence 468999999999999999999999987 4 68999999999999999988 999999 8889999999999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHhccCCCc
Q 036662 117 HLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILANSKRKMK 189 (316)
Q Consensus 117 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~~~~~~~ 189 (316)
|+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++ +++.+|..|.||||+|+. .+
T Consensus 72 ~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~----~~ 144 (153)
T 1awc_B 72 HMAASEGHANIVEVLLKHGAD---VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISID----NG 144 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----TT
T ss_pred HHHHHcChHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH----cC
Confidence 999999999999999999999 9999999999999999999999998 889999999999999999 89
Q ss_pred HHHHHHHH
Q 036662 190 DWEIGELL 197 (316)
Q Consensus 190 ~~~i~~~L 197 (316)
+.+++++|
T Consensus 145 ~~~i~~~L 152 (153)
T 1awc_B 145 NEDLAEIL 152 (153)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 99999987
No 70
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.6e-31 Score=236.17 Aligned_cols=161 Identities=15% Similarity=0.032 Sum_probs=135.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCC---HHHHHHHHhhC-CCcccccCCCCCcHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRH---KDFAKEILRQK-PGIAGELDSRKSSALH 76 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~---~~~v~~Ll~~~-~~~~~~~d~~g~tpLh 76 (316)
++||||+|+..|+.++|++|+++|+++ +.+|..|+||||+|+..|+ .++++.|++.+ +++ +.+|..|+||||
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~Gad~---n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~-~~~d~~g~tpLh 206 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHGSNR---LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL-ILEDSMNRTILH 206 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT---TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGG-GEECTTCCCHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccc-cCCCCCCCCHHH
Confidence 479999999999999999999999988 4569999999999999998 78899999987 555 899999999999
Q ss_pred HHHH----cCCcccccccHHHHHHHHHhC-------------------CCCcccccCCCCcHHHHHHhcCCHHHHHHHHh
Q 036662 77 IASQ----KRYVGMKSNRIDVLEELVRAR-------------------PLAASAPLIWVETILHLCVKHNQLEALKVLLE 133 (316)
Q Consensus 77 ~A~~----~g~~~~~~~~~~iv~~Ll~~~-------------------~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 133 (316)
+|+. .|+.++ +++|++.. +.+++.+|..|+||||.|+. +++|++
T Consensus 207 ~A~~~~~~~g~~~~-------v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~ 273 (327)
T 1sw6_A 207 HIIITSGMTGCSAA-------AKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIA 273 (327)
T ss_dssp HHHHHHTSTTCHHH-------HHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHH
T ss_pred HHHHHccccccHHH-------HHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHH
Confidence 9999 777777 99998842 78899999999999999996 899999
Q ss_pred cCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHHHh
Q 036662 134 NTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDILAN 183 (316)
Q Consensus 134 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a~~ 183 (316)
+ + +|.+|.+|+||||+|+..|+.++++ +++.+|.+|+||||+|++
T Consensus 274 ~--~---~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 274 N--M---LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp H--T---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred h--C---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 7 4 8899999999999999999999999 899999999999999986
No 71
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.4e-30 Score=225.28 Aligned_cols=154 Identities=18% Similarity=0.184 Sum_probs=138.9
Q ss_pred CCcHHHHHHHc---CCHHHHHHHHHcChhhHH----hh----hcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCC
Q 036662 1 MESKLYEAALA---GSVTSLLEFLQKDRLILE----RA----AMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDS 69 (316)
Q Consensus 1 m~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~----~~----~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 69 (316)
++||||+|+.. |+.++|++|++.+++... .+ ..|..|.||||+|+..|+.+++++|+++|+++ +.+|.
T Consensus 54 g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~ 132 (273)
T 2pnn_A 54 GKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAAN 132 (273)
T ss_dssp CCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBC
T ss_pred CCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-Ccccc
Confidence 47999999987 999999999999876321 11 14668999999999999999999999999998 77776
Q ss_pred --------------CCCcHHHHHHHcCCcccccccHHHHHHHHHh--CCCCcccccCCCCcHHHHHHhcCC---------
Q 036662 70 --------------RKSSALHIASQKRYVGMKSNRIDVLEELVRA--RPLAASAPLIWVETILHLCVKHNQ--------- 124 (316)
Q Consensus 70 --------------~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~--~~~~~~~~d~~g~t~Lh~A~~~g~--------- 124 (316)
.|.||||+|+..|+.++ +++|++. .+.+++.+|.+|+||||+|+..|+
T Consensus 133 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~-------v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~ 205 (273)
T 2pnn_A 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAI-------VKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFV 205 (273)
T ss_dssp SGGGSSCSSSCCCCSCBSHHHHHHHTTCHHH-------HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHH-------HHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHH
Confidence 79999999999999988 9999996 788999999999999999999998
Q ss_pred HHHHHHHHhcCCCccccc-------cccCCCCcHHHHHHhcCCcceec
Q 036662 125 LEALKVLLENTDDSEFLN-------AKDDYGMSILHLAVADKQIEYYN 165 (316)
Q Consensus 125 ~~~v~~Ll~~g~~~~~~~-------~~d~~g~t~Lh~A~~~~~~~~v~ 165 (316)
.+++++|+++|++ +| .+|.+|+||||+|+..|+.++++
T Consensus 206 ~~~v~~Ll~~ga~---~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~ 250 (273)
T 2pnn_A 206 TSMYNEILILGAK---LHPTLKLEEITNRKGLTPLALAASSGKIGVLA 250 (273)
T ss_dssp HHHHHHHHHHHHH---HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhhhh---cccccccccccCCCCCCHHHHHHHhChHHHHH
Confidence 8999999999988 65 58999999999999999999998
No 72
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=4.1e-30 Score=203.53 Aligned_cols=147 Identities=19% Similarity=0.202 Sum_probs=138.1
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhhC-CCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcH
Q 036662 37 SETPLHVAALLRHKDFAKEILRQK-PGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETI 115 (316)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~ 115 (316)
+.||||.|+..|+.++++.|++.. .++ +..|..|.||||+ +..|+.++ +++|++ .+.+++.+|..|+||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~-~~~~~~~~-------v~~Ll~-~g~~~~~~~~~g~t~ 71 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHP-DALNRFGKTALQV-MMFGSTAI-------ALELLK-QGASPNVQDTSGTSP 71 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCT-TCCCTTSCCHHHH-SCTTCHHH-------HHHHHH-TTCCTTCCCTTSCCH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCc-cccCCCCCcHHHH-HHcCCHHH-------HHHHHH-CCCCCCCcCCCCCCH
Confidence 568999999999999999999993 255 8899999999999 88888888 999999 889999999999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec------ccccccCCCCCHHHHHHhccCCCc
Q 036662 116 LHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN------QSECCYANGFTAWDILANSKRKMK 189 (316)
Q Consensus 116 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~------~~~~~~~~g~TpL~~a~~~~~~~~ 189 (316)
||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++ +++.+|.+|.||||+|+. .+
T Consensus 72 L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~----~~ 144 (156)
T 1bd8_A 72 VHDAARTGFLDTLKVLVEHGAD---VNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQ----RG 144 (156)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHH----SC
T ss_pred HHHHHHcCcHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHH----cC
Confidence 9999999999999999999999 9999999999999999999999998 789999999999999999 89
Q ss_pred HHHHHHHHHHh
Q 036662 190 DWEIGELLRRA 200 (316)
Q Consensus 190 ~~~i~~~Ll~~ 200 (316)
+.+++++|+++
T Consensus 145 ~~~~v~~Ll~~ 155 (156)
T 1bd8_A 145 AQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTT
T ss_pred cHHHHHHHHhh
Confidence 99999999874
No 73
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=4.4e-30 Score=222.81 Aligned_cols=150 Identities=16% Similarity=0.127 Sum_probs=141.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCh-hhHHhhhcCCCCCCHHHHHH-----hcCCHHHHHHHHhhCCCcccccCCCCCcH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDR-LILERAAMNCPSETPLHVAA-----LLRHKDFAKEILRQKPGIAGELDSRKSSA 74 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~g~t~Lh~A~-----~~g~~~~v~~Ll~~~~~~~~~~d~~g~tp 74 (316)
++||||+|+..|+.++|+.|++.++ ++ +..|..|.||||+|+ ..++.++++.|++.|.++ +..|..|+||
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~---~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tp 186 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVCKV---DKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQAGQTA 186 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCCCT---TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcC---CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCCCCCCH
Confidence 4799999999999999999999998 65 445899999999999 668999999999999887 8889999999
Q ss_pred HHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHh-cCCCccccccccCCCCcHHH
Q 036662 75 LHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLE-NTDDSEFLNAKDDYGMSILH 153 (316)
Q Consensus 75 Lh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~d~~g~t~Lh 153 (316)
||+|+..|+.++ +++|++ ++++++.+|.+|+||||+|+..|+.+++++|++ .|++ ++.+|.+|+||||
T Consensus 187 Lh~A~~~g~~~~-------v~~Ll~-~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad---~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 187 LMLAVSHGRVDV-------VKALLA-CEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD---ISLTDRDGSTALM 255 (276)
T ss_dssp HHHHHHTTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC---TTCCCTTSCCHHH
T ss_pred HHHHHHcCCHHH-------HHHHHh-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC---CcCcCCCCCCHHH
Confidence 999999999988 999999 899999999999999999999999999999999 8999 9999999999999
Q ss_pred HHHhcCCcceec
Q 036662 154 LAVADKQIEYYN 165 (316)
Q Consensus 154 ~A~~~~~~~~v~ 165 (316)
+|+..|+.++++
T Consensus 256 ~A~~~g~~~iv~ 267 (276)
T 4hbd_A 256 VALDAGQSEIAS 267 (276)
T ss_dssp HHHHHTCHHHHH
T ss_pred HHHHcCCHHHHH
Confidence 999999998876
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=7.5e-31 Score=222.86 Aligned_cols=167 Identities=14% Similarity=0.001 Sum_probs=120.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+.||||.|++.|+.+.++.|+++|.++. .+..|.||||+|+..|+.++++.|++.|+++ +.+|..|.||||+|+.
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~----~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVK----FNPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHH
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCcc----cCchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 4799999999999999999999998873 2577899999999999999999999999998 8999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCC-cHHHHH--Hh
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGM-SILHLA--VA 157 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~-t~Lh~A--~~ 157 (316)
.|+.++ +++|++ ++++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|. ||||+| +.
T Consensus 80 ~g~~~~-------v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~t~l~~a~~~~ 148 (239)
T 1ycs_B 80 AGHTEI-------VKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA---VFAMTYSDMQTAADKCEEME 148 (239)
T ss_dssp HTCHHH-------HHHHHH-HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCSSSCCCHHHHCCSSS
T ss_pred cCCHHH-------HHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---cceecCCCCcchHHHHHHhh
Confidence 999988 999999 7899999999999999999999999999999999999 999998877 999999 67
Q ss_pred cCCcceec-------ccccc---------cCCCCCHHHHHHh
Q 036662 158 DKQIEYYN-------QSECC---------YANGFTAWDILAN 183 (316)
Q Consensus 158 ~~~~~~v~-------~~~~~---------~~~g~TpL~~a~~ 183 (316)
.|+.++++ +++.. +..+.+|++++..
T Consensus 149 ~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 149 EGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp TTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred hccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCccccc
Confidence 78888777 33333 5566777766655
No 75
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.9e-30 Score=222.62 Aligned_cols=154 Identities=17% Similarity=0.151 Sum_probs=138.1
Q ss_pred CCcHHHHHH---HcCCHHHHHHHHHcChhhHHh--------hhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccC-
Q 036662 1 MESKLYEAA---LAGSVTSLLEFLQKDRLILER--------AAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELD- 68 (316)
Q Consensus 1 m~t~L~~A~---~~g~~~~v~~Ll~~~~~~~~~--------~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d- 68 (316)
++||||.|+ +.|+.++|+.|++.+++.... ...|..|+||||+|+..|+.++|++|+++|+++ +..|
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~ 124 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQAR 124 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCE
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-Ccccc
Confidence 469999999 779999999999998753221 123448999999999999999999999999998 7777
Q ss_pred -------------CCCCcHHHHHHHcCCcccccccHHHHHHHHHh--CCCCcccccCCCCcHHHHHHhcCC---------
Q 036662 69 -------------SRKSSALHIASQKRYVGMKSNRIDVLEELVRA--RPLAASAPLIWVETILHLCVKHNQ--------- 124 (316)
Q Consensus 69 -------------~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~--~~~~~~~~d~~g~t~Lh~A~~~g~--------- 124 (316)
..|.||||+|+..|+.++ +++|++. .+++++.+|..|+||||+|+..|+
T Consensus 125 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~-------v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~ 197 (260)
T 3jxi_A 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHI-------VHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFV 197 (260)
T ss_dssp ECCCSSSCCCCSCCSCSSHHHHHHHTTCHHH-------HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHH
T ss_pred ccccCcccccccccCCCCHHHHHHHcCCHHH-------HHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHH
Confidence 689999999999999988 9999996 788999999999999999999887
Q ss_pred HHHHHHHHhcCCCcccc-------ccccCCCCcHHHHHHhcCCcceec
Q 036662 125 LEALKVLLENTDDSEFL-------NAKDDYGMSILHLAVADKQIEYYN 165 (316)
Q Consensus 125 ~~~v~~Ll~~g~~~~~~-------~~~d~~g~t~Lh~A~~~~~~~~v~ 165 (316)
.+++++|+++|++ + +.+|.+|+||||+|+..|+.++++
T Consensus 198 ~~~v~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 198 TKMYDLLLIKCAK---LFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242 (260)
T ss_dssp HHHHHHHHHHHHH---HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhCcc---cccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence 7999999999988 6 789999999999999999999887
No 76
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=3.4e-30 Score=210.34 Aligned_cols=153 Identities=11% Similarity=0.088 Sum_probs=134.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCH----HHHHHHHhhCCCcccccCCCCCcHHHHH
Q 036662 3 SKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHK----DFAKEILRQKPGIAGELDSRKSSALHIA 78 (316)
Q Consensus 3 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~----~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 78 (316)
++|+.|++.|+.+.++.+++.+.+..+ +..|+||||+|+..|+. +++++|+++|+++ +.+|..|+||||+|
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~~~----~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYEDKE----SVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPL 82 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSCHH----HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCccccc----ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 689999999999999999998764321 25799999999999975 5999999999999 99999999999999
Q ss_pred HHcCCcccccccHHHHHHHHHhCCCCcccccCCCC-cHHHHHHhcC-----CHHHHHHHHh-cCCCccccccccCCCCcH
Q 036662 79 SQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVE-TILHLCVKHN-----QLEALKVLLE-NTDDSEFLNAKDDYGMSI 151 (316)
Q Consensus 79 ~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~-t~Lh~A~~~g-----~~~~v~~Ll~-~g~~~~~~~~~d~~g~t~ 151 (316)
+..|+.++ .+..+++++|++ .+++++.+|..|+ ||||+|+..+ +.+++++|++ +|++ ++.+|.+|+||
T Consensus 83 ~~~~~~~~-~~~~~iv~~Ll~-~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad---~~~~d~~G~Tp 157 (186)
T 3t8k_A 83 FQGGGNDI-TGTTELCKIFLE-KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ---LLIKDKWGLTA 157 (186)
T ss_dssp HHHCTTCH-HHHHHHHHHHHH-TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC---TTCCCTTSCCH
T ss_pred HHcCCcch-hhHHHHHHHHHH-CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC---CcccCCCCCCH
Confidence 99997543 334566999999 8999999999999 9999999954 4579999999 9999 99999999999
Q ss_pred HHHHHhcCCcceec
Q 036662 152 LHLAVADKQIEYYN 165 (316)
Q Consensus 152 Lh~A~~~~~~~~v~ 165 (316)
||+|+..++.++++
T Consensus 158 L~~A~~~~~~~~v~ 171 (186)
T 3t8k_A 158 LEFVKRCQKPIALK 171 (186)
T ss_dssp HHHHHTTTCHHHHH
T ss_pred HHHHHHcCCHHHHH
Confidence 99999988877766
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=4.4e-31 Score=222.87 Aligned_cols=192 Identities=13% Similarity=0.010 Sum_probs=158.7
Q ss_pred HHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHH
Q 036662 17 LLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEE 96 (316)
Q Consensus 17 v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~ 96 (316)
|+.|++++.+....+..+..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++ +++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~-------v~~ 72 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSI-------VDF 72 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHH-------HHH
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHH-------HHH
Confidence 46788888877555555677889999999999999999999999998 8899999999999999999988 999
Q ss_pred HHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCcccccccc-CCCCcHHHHH--HhcCCcceec-------c
Q 036662 97 LVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKD-DYGMSILHLA--VADKQIEYYN-------Q 166 (316)
Q Consensus 97 Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d-~~g~t~Lh~A--~~~~~~~~v~-------~ 166 (316)
|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+| .+|+||||+| +..|+.++++ +
T Consensus 73 Ll~-~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~---~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~ 148 (229)
T 2vge_A 73 LIT-AGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAA---IFATTLSDGATAFEKCDPYREGYADCATYLADVEQS 148 (229)
T ss_dssp HHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH
T ss_pred HHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC
Confidence 999 8999999999999999999999999999999999999 99887 6999999999 9999999998 8
Q ss_pred cccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCC--cccccCCccccccccccCcccccc
Q 036662 167 SECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAI--SAKEMQQPATKVSITQTNSLTSHG 227 (316)
Q Consensus 167 ~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~~~~~ 227 (316)
++.+|..|.||++.+.. .. ..++|++.|++ .+.....+.+++..+........+
T Consensus 149 ~~~~~~~~~~~l~~~~~----~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v 204 (229)
T 2vge_A 149 MGLMNSGAVYALWDYSA----EF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYV 204 (229)
T ss_dssp TTTSGGGEEEESSCBCC----SS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEE
T ss_pred cccccCCchHHHHHHhh----cc---ccccCccccccccccccCCCcccHHHHHHHcCCccee
Confidence 89999999999997555 22 23678889998 455666778888776665554444
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=2.5e-29 Score=199.36 Aligned_cols=139 Identities=15% Similarity=0.133 Sum_probs=106.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCc-HHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSS-ALHIAS 79 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t-pLh~A~ 79 (316)
++||||.|+..|+.++|++|++++.++ +.+|..|+||||+|+ .|+.+++++|+++|+++ +.+|..|.| |||+|+
T Consensus 12 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 12 SADWLATAAARGRVEEVRALLEAGANP---NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAA 86 (156)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCCT---TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHH
T ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 368999999999999999999988876 445888999999985 88999999999999988 888889998 999999
Q ss_pred HcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHH
Q 036662 80 QKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLA 155 (316)
Q Consensus 80 ~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 155 (316)
..|+.++ +++|++ ++++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||.+-+
T Consensus 87 ~~~~~~~-------v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 87 REGFLDT-------LVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG---TRGSNHARIDAAEGP 151 (156)
T ss_dssp HHTCHHH-------HHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------
T ss_pred HCCCHHH-------HHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC---CCccCcCcCcccccC
Confidence 8888888 999998 6888888899999999999999999999999999988 888888898887743
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.3e-29 Score=213.60 Aligned_cols=157 Identities=15% Similarity=0.052 Sum_probs=114.5
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVE 113 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~ 113 (316)
+..|.||||.|+..|+.+.++.|+++|+++ +. +..|.||||.|+..|+.++ ++.|++ .+.+++.+|..|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~-------v~~Ll~-~g~~~~~~d~~g~ 71 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDL-------VQRIIY-EVDDPSLPNDEGI 71 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHH-------HHHHTS-TTSSCCCCCTTSC
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHH-------HHHHHH-cCCCCCCcCCCCC
Confidence 346999999999999999999999999998 53 5789999999999999998 999999 7889999999999
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCC-CHHHHH--Hh
Q 036662 114 TILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGF-TAWDIL--AN 183 (316)
Q Consensus 114 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~-TpL~~a--~~ 183 (316)
||||+|+.+|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++++ +++.+|..|. ||||+| +.
T Consensus 72 t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~ 148 (239)
T 1ycs_B 72 TALHNAVCAGHTEIVKFLVQFGVN---VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEME 148 (239)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSS
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhh
Confidence 999999999999999999999999 9999999999999999999999998 8999998887 999998 45
Q ss_pred ccCCCcHHHHHHHHHHhCCCcccc
Q 036662 184 SKRKMKDWEIGELLRRAGAISAKE 207 (316)
Q Consensus 184 ~~~~~~~~~i~~~Ll~~ga~~~~~ 207 (316)
.++.+++++|+++|++.+..
T Consensus 149 ----~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 149 ----EGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp ----TTCCCHHHHHHHHHHHTTTT
T ss_pred ----hccHHHHHHHHHhhhccccc
Confidence 68899999999999988654
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=4e-28 Score=187.86 Aligned_cols=122 Identities=18% Similarity=0.201 Sum_probs=72.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCC-CCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSR-KSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~-g~tpLh~A~~ 80 (316)
+||||.|+..|+.+++++|++++.++ +.+|..|+||||+|+. |+.+++++|+++|+++ +.+|.. |.||||+|+.
T Consensus 13 ~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 13 DAGLATAAARGQVETVRQLLEAGADP---NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDAAR 87 (136)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCc---CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHHHH
Confidence 45666666666666666666665544 2235556666666666 6666666666666665 555555 5666666666
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTD 136 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~ 136 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|+
T Consensus 88 ~~~~~~-------v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 88 EGFLDT-------LVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HTCHHH-------HHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred cCCHHH-------HHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 555555 666665 555555556666666666666666666666665554
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=3.1e-28 Score=188.45 Aligned_cols=130 Identities=16% Similarity=0.149 Sum_probs=115.2
Q ss_pred hhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccC
Q 036662 31 AAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLI 110 (316)
Q Consensus 31 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~ 110 (316)
+.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+. |+.++ +++|++ .+.+++.+|.
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~-------v~~Ll~-~g~~~~~~~~ 75 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQV-------AELLLL-HGAEPNCADP 75 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHH-------HHHHHH-HTCCSSCCBT
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHH-------HHHHHH-CCCCCCCcCC
Confidence 445889999999999999999999999999998 8899999999999999 99888 999999 7888999999
Q ss_pred C-CCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceecccccccCCCCCHHHHHHhccCCCc
Q 036662 111 W-VETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYNQSECCYANGFTAWDILANSKRKMK 189 (316)
Q Consensus 111 ~-g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~~~~~~~~g~TpL~~a~~~~~~~~ 189 (316)
. |+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..+
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~------------------------------ 122 (136)
T 1d9s_A 76 ATLTRPVHDAAREGFLDTLVVLHRAGAR---LDVCDAWGRLPVDLAEEQG------------------------------ 122 (136)
T ss_dssp TTTBCHHHHHHHHTCHHHHHHHHHTCCC---CCCCSSSSSCHHHHHHHHT------------------------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcC------------------------------
Confidence 9 99999999999999999999999998 8888777777777776644
Q ss_pred HHHHHHHHHHhCCC
Q 036662 190 DWEIGELLRRAGAI 203 (316)
Q Consensus 190 ~~~i~~~Ll~~ga~ 203 (316)
+.+++++|+++|++
T Consensus 123 ~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 123 HRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHcCCC
Confidence 45677888887775
No 82
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.95 E-value=1.5e-29 Score=215.50 Aligned_cols=145 Identities=17% Similarity=0.077 Sum_probs=133.8
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCccccc-CCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPL-IWV 112 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d-~~g 112 (316)
+..|.||||+|+..|+.++++.|++ |+++ +.+|..|+||||+|+..|+.++ +++|++ ++.+++.+| ..|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~-------v~~Ll~-~ga~~~~~~~~~g 111 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKC-------VRLLAE-AGADLDHRDMRGG 111 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHH-------HHHHHH-TTCCTTCCCSSSC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHH-------HHHHHH-cCCCCCcCCCCCC
Confidence 4568999999999999999999999 9998 8999999999999999999988 999999 889998888 889
Q ss_pred CcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceecccccccCCCCCHHHHHHhccCCCcHHH
Q 036662 113 ETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYNQSECCYANGFTAWDILANSKRKMKDWE 192 (316)
Q Consensus 113 ~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~~~~~~~~g~TpL~~a~~~~~~~~~~~ 192 (316)
+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..++ +..+.|||++|+. .++.+
T Consensus 112 ~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~t~l~~A~~~~~----------~~~~~~~l~~a~~----~g~~~ 174 (244)
T 3ui2_A 112 LTALHMAAGYVRPEVVEALVELGAD---IEVEDERGLTALELAREILK----------TTPKGNPMQFGRR----IGLEK 174 (244)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHHHT----------TCCCSSHHHHHHH----HHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCcHHHHHHHHHh----------ccCCCCHHHHHHH----cChHH
Confidence 9999999999999999999999999 99999999999999998553 3578999999999 89999
Q ss_pred HHHHHHHhCCCcc
Q 036662 193 IGELLRRAGAISA 205 (316)
Q Consensus 193 i~~~Ll~~ga~~~ 205 (316)
++++|++++.+..
T Consensus 175 iv~~L~~~~~~~~ 187 (244)
T 3ui2_A 175 VINVLEGQVFEYA 187 (244)
T ss_dssp HHHHHHHHHEEEE
T ss_pred HHHHHHHhccccc
Confidence 9999999876543
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=2e-27 Score=183.85 Aligned_cols=122 Identities=19% Similarity=0.224 Sum_probs=81.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHc
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQK 81 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 81 (316)
.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADV---NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHc
Confidence 36677777777777777777666655 333666677777777777777777777776666 66666677777777766
Q ss_pred CCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcC
Q 036662 82 RYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENT 135 (316)
Q Consensus 82 g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g 135 (316)
|+.++ +++|++ .+.+++.+|.+|+||||+|+.+|+.+++++|+++|
T Consensus 91 ~~~~~-------v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEI-------AEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHH-------HHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 66666 677666 56666666666777777777777777777766654
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=3.7e-28 Score=192.51 Aligned_cols=136 Identities=15% Similarity=0.063 Sum_probs=110.9
Q ss_pred cCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCC
Q 036662 33 MNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWV 112 (316)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g 112 (316)
.+..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+ .|+.++ +++|++ .+.+++.+|..|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~-------v~~Ll~-~g~~~~~~d~~g 77 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARV-------AELLLL-HGAEPNCADPAT 77 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHH-------HHHHHT-TTCCCCCCCTTT
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHH-------HHHHHH-cCCCCCCcCCCC
Confidence 4778999999999999999999999999998 889999999999985 777777 999999 889999999999
Q ss_pred Cc-HHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-------ccccccCCCCCHHHHH
Q 036662 113 ET-ILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-------QSECCYANGFTAWDIL 181 (316)
Q Consensus 113 ~t-~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-------~~~~~~~~g~TpL~~a 181 (316)
+| |||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++ +++.+|..|.||.+-+
T Consensus 78 ~ttpL~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 78 LTRPVHDAAREGFLDTLVVLHRAGAR---LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCC---SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CcHHHHHHHHCCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 99 99999999999999999999999 9999999999999999988887777 6777777777777643
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=9.1e-27 Score=176.95 Aligned_cols=125 Identities=25% Similarity=0.275 Sum_probs=116.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|++.|+.+++++|++++.++ +..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCC---CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHH
Confidence 579999999999999999999999877 445889999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDD 137 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~ 137 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 78 ~~~~~~-------~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEV-------VKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cChHHH-------HHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999888 999999 8888999999999999999999999999999999975
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=2.7e-27 Score=192.66 Aligned_cols=140 Identities=16% Similarity=0.102 Sum_probs=130.2
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCccccc-CCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPL-IWV 112 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d-~~g 112 (316)
+..|.||||+|+..|+.++++.|++ |+++ +.+|..|+||||+|+..|+.++ +++|++ ++.+++.+| ..|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~-------v~~Ll~-~ga~~~~~~~~~g 110 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKC-------VRLLAE-AGADLDHRDMRGG 110 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHH-------HHHHHH-TTCCTTCCCSSSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCCCCcCCCCCC
Confidence 4578999999999999999999999 9988 8899999999999999999988 999999 888998888 899
Q ss_pred CcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceecccccccCCCCCHHHHHHhccCCCcHHH
Q 036662 113 ETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYNQSECCYANGFTAWDILANSKRKMKDWE 192 (316)
Q Consensus 113 ~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~~~~~~~~g~TpL~~a~~~~~~~~~~~ 192 (316)
+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++. ..+.+||++|+. .+..+
T Consensus 111 ~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~----------~~~~~~l~~a~~----~~~~~ 173 (183)
T 3deo_A 111 LTALHMAAGYVRPEVVEALVELGAD---IEVEDERGLTALELAREILKT----------TPKGNPMQFGRR----IGLEK 173 (183)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHHHHT----------CCCCSHHHHHHH----HHHHH
T ss_pred CCHHHHHHhcCcHHHHHHHHHcCCC---CcCCCCCCCCHHHHHHHhccC----------cccccHHHHHHH----cCHHH
Confidence 9999999999999999999999999 999999999999999997654 457899999999 89999
Q ss_pred HHHHHHHh
Q 036662 193 IGELLRRA 200 (316)
Q Consensus 193 i~~~Ll~~ 200 (316)
++++|.++
T Consensus 174 i~~~L~~~ 181 (183)
T 3deo_A 174 VINVLEGQ 181 (183)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 99999764
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=4.4e-28 Score=197.83 Aligned_cols=155 Identities=14% Similarity=-0.010 Sum_probs=134.2
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHH
Q 036662 37 SETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETIL 116 (316)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~L 116 (316)
+.++||.|+..|+.+.++.+++.+.+. ..|..|+||||+|+..|+.+ ++.+++++|++ .+++++.+|.+|+|||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~---~~~~iv~~Ll~-~Gadvn~~d~~g~TpL 79 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDE---ARYKISMFLIN-KGADIKSRTKEGTTLF 79 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHH---HHHHHHHHHHH-TTCCSSCCCTTCCCTH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcc---hHHHHHHHHHH-CCCCCCCCCCCCCcHH
Confidence 568899999999999999999988653 22378999999999999753 12345999999 9999999999999999
Q ss_pred HHHHhcCC------HHHHHHHHhcCCCccccccccCCCC-cHHHHHHhcCCc-----ceec--------ccccccCCCCC
Q 036662 117 HLCVKHNQ------LEALKVLLENTDDSEFLNAKDDYGM-SILHLAVADKQI-----EYYN--------QSECCYANGFT 176 (316)
Q Consensus 117 h~A~~~g~------~~~v~~Ll~~g~~~~~~~~~d~~g~-t~Lh~A~~~~~~-----~~v~--------~~~~~~~~g~T 176 (316)
|+|+..|+ .+++++|+++|++ +|.+|.+|+ ||||+|+..+.. ++++ +++.+|..|+|
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~Gad---in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKGAD---ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCC---SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCCCC---CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence 99999987 6889999999999 999999999 999999996543 2433 89999999999
Q ss_pred HHHHHHhccCCCcHHHHHHHHHHhCCCc
Q 036662 177 AWDILANSKRKMKDWEIGELLRRAGAIS 204 (316)
Q Consensus 177 pL~~a~~~~~~~~~~~i~~~Ll~~ga~~ 204 (316)
|||+|++ .++.+++++|.++..+.
T Consensus 157 pL~~A~~----~~~~~~v~~L~~~~~~~ 180 (186)
T 3t8k_A 157 ALEFVKR----CQKPIALKMMEDYIKKY 180 (186)
T ss_dssp HHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 9999999 89999999999776544
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=2.9e-26 Score=174.17 Aligned_cols=126 Identities=33% Similarity=0.407 Sum_probs=112.8
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcH
Q 036662 36 PSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETI 115 (316)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~ 115 (316)
+|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.++ +++|++ .+.+++.+|..|+||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~-------~~~Ll~-~g~~~~~~~~~g~t~ 71 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEV-------VKLLLE-AGADVNAKDKNGRTP 71 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHH-------HHHHHH-TTCCTTCCCTTSCCH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHH-------HHHHHH-cCCCCcccCCCCCcH
Confidence 5899999999999999999999999998 8899999999999999999988 999999 888999999999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceecccccccCCCCCHHHHHHhccCCCcHHHHHH
Q 036662 116 LHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYNQSECCYANGFTAWDILANSKRKMKDWEIGE 195 (316)
Q Consensus 116 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~ 195 (316)
||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+. .++.++++
T Consensus 72 l~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~l~~A~~------------------------------~~~~~~~~ 118 (126)
T 1n0r_A 72 LHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAAR------------------------------NGHLEVVK 118 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHH------------------------------TTCHHHHH
T ss_pred HHHHHHcChHHHHHHHHHcCCC---CcccCCCCCCHHHHHHH------------------------------cCcHHHHH
Confidence 9999999999999999999988 77777766666666655 45567888
Q ss_pred HHHHhCCC
Q 036662 196 LLRRAGAI 203 (316)
Q Consensus 196 ~Ll~~ga~ 203 (316)
+|+++|++
T Consensus 119 ~Ll~~Gad 126 (126)
T 1n0r_A 119 LLLEAGAY 126 (126)
T ss_dssp HHHHHTCC
T ss_pred HHHHcCCC
Confidence 88888875
No 89
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=1.8e-26 Score=183.49 Aligned_cols=125 Identities=16% Similarity=0.098 Sum_probs=115.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+. |+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 38 g~t~L~~A~~-~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 112 (162)
T 1ihb_A 38 GRTALQVMKL-GNPEIARRLLLRGANP---DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAK 112 (162)
T ss_dssp SCCHHHHCCS-SCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHc-CcHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 4799999999 9999999999999887 445899999999999999999999999999998 8999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDD 137 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~ 137 (316)
.|+.++ +++|++.....++.+|..|+||||+|+.+|+.+++++|+++|+|
T Consensus 113 ~~~~~~-------v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 113 EGHLRV-------VEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTCHHH-------HHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred cCCHHH-------HHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999988 99999966556799999999999999999999999999999975
No 90
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=5.2e-29 Score=224.51 Aligned_cols=145 Identities=10% Similarity=-0.027 Sum_probs=118.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcc--cccCCCCCcHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIA--GELDSRKSSALHIAS 79 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~~d~~g~tpLh~A~ 79 (316)
+||||.|++.|+.++|++|+++++........+..|.||||+|+..|+.++|++|+++|+++. +..+.+ .||||+|+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 489999999999999999999987221111235568899999999999999999999998621 222223 99999999
Q ss_pred HcCCcccccccHHHHHHHHHhCCCCccc--ccCCCCcHHHHHH-hcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHH
Q 036662 80 QKRYVGMKSNRIDVLEELVRARPLAASA--PLIWVETILHLCV-KHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAV 156 (316)
Q Consensus 80 ~~g~~~~~~~~~~iv~~Ll~~~~~~~~~--~d~~g~t~Lh~A~-~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~ 156 (316)
..|+.++ +++|++ .+.+++. .|..|+||||+|+ .+|+.++|++|++.|++ |+||||+|+
T Consensus 172 ~~G~~ei-------v~~Ll~-~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----------~~taL~~Aa 233 (376)
T 2aja_A 172 ENGHLHV-------LNRLCE-LAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM----------LAYAEIHEF 233 (376)
T ss_dssp HTTCHHH-------HHHHHH-SCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----------HHHHHHCTT
T ss_pred HCCCHHH-------HHHHHH-cCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----------cchHHHHHH
Confidence 9999998 999999 7777776 7889999999999 99999999999996632 789999999
Q ss_pred hcCCcceec
Q 036662 157 ADKQIEYYN 165 (316)
Q Consensus 157 ~~~~~~~v~ 165 (316)
..|+.++++
T Consensus 234 ~~g~~evv~ 242 (376)
T 2aja_A 234 EYGEKYVNP 242 (376)
T ss_dssp TTTTTTHHH
T ss_pred HCCCHHHHH
Confidence 988888777
No 91
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.1e-26 Score=179.72 Aligned_cols=119 Identities=20% Similarity=0.236 Sum_probs=108.3
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVE 113 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~ 113 (316)
...+.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.++ +++|++ .+.+++.+|..|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~d~~g~ 81 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEI-------VEVLLK-NGADVNAVDAIGF 81 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHH-------HHHHHH-TTCCTTCCCTTCC
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCCCCcCCCCCC
Confidence 567899999999999999999999999998 8899999999999999999988 999999 8899999999999
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCccee
Q 036662 114 TILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYY 164 (316)
Q Consensus 114 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v 164 (316)
||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 82 t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~tpl~~A~~~~~~~~~ 129 (136)
T 2jab_A 82 TPLHLAAFIGHLEIAEVLLKHGAD---VNAQDKFGKTAFDISIGNGNEDLA 129 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC---CcCcCCCCCCHHHHHHHCCCHHHH
Confidence 999999999999999999999998 888888888888888776655443
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=6.3e-27 Score=181.22 Aligned_cols=121 Identities=18% Similarity=0.187 Sum_probs=112.4
Q ss_pred cCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCC
Q 036662 33 MNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWV 112 (316)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g 112 (316)
+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.++ +++|++ .+.+++.+|..|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~-------~~~Ll~-~g~~~~~~~~~g 76 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKV-------VELLLQ-HKALVNTTGYQN 76 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCGGG
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCcccCcCCCC
Confidence 5889999999999999999999999999998 8899999999999999999988 999999 899999999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec
Q 036662 113 ETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN 165 (316)
Q Consensus 113 ~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~ 165 (316)
+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..+..++++
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~~l~ 126 (137)
T 3c5r_A 77 DSPLHDAAKNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDDESMKSLLL 126 (137)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhhccHHHHHh
Confidence 9999999999999999999999999 9999999999999988776665543
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=1.8e-26 Score=202.37 Aligned_cols=141 Identities=18% Similarity=0.125 Sum_probs=101.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHcChhhHHhh---hcCCCCCCHHHHHHhc---CCHHHHHHHHhhCCCcccccCCCCCcHHH
Q 036662 3 SKLYEAALAGSVTSLLEFLQKDRLILERA---AMNCPSETPLHVAALL---RHKDFAKEILRQKPGIAGELDSRKSSALH 76 (316)
Q Consensus 3 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 76 (316)
++|+.|+..|+.+.|+.|++.++++.... ..+..|.||||+|+.. |+.+++++|+++|+++ +.+|..|+||||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh 231 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHHH
Confidence 45888888888888888888777653210 0366788888888876 7788888888888887 777888888888
Q ss_pred HHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHH
Q 036662 77 IASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAV 156 (316)
Q Consensus 77 ~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~ 156 (316)
+|+..|+.++ +++|++ .+++++.+|.+|+||||+|+..|+.+++++|+++|++ .|.||||+|+
T Consensus 232 ~A~~~g~~~~-------v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~ 294 (301)
T 2b0o_E 232 YAALYNQPDC-------LKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDY 294 (301)
T ss_dssp HHHHTTCHHH-------HHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC---
T ss_pred HHHHcCCHHH-------HHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHH
Confidence 8888877777 888888 7777888888888888888888888888888877653 4678888888
Q ss_pred hcCCc
Q 036662 157 ADKQI 161 (316)
Q Consensus 157 ~~~~~ 161 (316)
..|+.
T Consensus 295 ~~g~~ 299 (301)
T 2b0o_E 295 SWVIS 299 (301)
T ss_dssp -----
T ss_pred hcCCc
Confidence 77653
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=1.3e-26 Score=176.07 Aligned_cols=117 Identities=17% Similarity=0.122 Sum_probs=103.7
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVE 113 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~ 113 (316)
+..|.||||+|+..|+.++++.|++.|+++ +.+|..|+||||+|+..|+.++ +++|++ .+.+++.+|..|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~-~g~~~~~~d~~g~ 74 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEI-------LEFLLL-KGADINAPDKHHI 74 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHH-------HHHHHT-TTCCTTCCCTTSC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHH-------HHHHHH-cCCCCCcCCCCCC
Confidence 567889999999999999999999999998 8889999999999999999888 999998 8888999999999
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcc
Q 036662 114 TILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIE 162 (316)
Q Consensus 114 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~ 162 (316)
||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|...+..+
T Consensus 75 tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 75 TPLLSAVYEGHVSCVKLLLSKGAD---KTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHhCCHHHHH
Confidence 999999999999999999999999 8999999999999986554443
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=8.5e-26 Score=174.81 Aligned_cols=124 Identities=20% Similarity=0.159 Sum_probs=112.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 10 g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVEYLLQNGSDP---NVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDAAK 85 (137)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC---CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHHHH
Confidence 479999999999999999999999887 445899999999999999999999999999998 8899999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTD 136 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~ 136 (316)
.|+.++ +++|++ .+.+++.+|..|+||||+|+..+..+++++|.+.+.
T Consensus 86 ~~~~~~-------v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 86 NGHVDI-------VKLLLS-YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred cCCHHH-------HHHHHH-cCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999988 999999 899999999999999999999999999988877654
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=2.1e-25 Score=169.31 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=105.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.++++.|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDV---NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVY 82 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT---TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCc---CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHH
Confidence 368999999999999999999999877 445889999999999999999999999999998 8999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHH
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEA 127 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~ 127 (316)
.|+.++ +++|++ .+.+++.+|.+|+||||+|...+..++
T Consensus 83 ~~~~~~-------v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 83 EGHVSC-------VKLLLS-KGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred cCCHHH-------HHHHHH-cCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 999988 999999 789999999999999999965544444
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.2e-25 Score=188.35 Aligned_cols=121 Identities=18% Similarity=0.186 Sum_probs=80.8
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCC
Q 036662 34 NCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVE 113 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~ 113 (316)
+..|.||||+|+..|+.++++.|++.|+++ +.+|..|+||||+|+..|+.++ +++|++..+.+++.+|..|+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~-------v~~Ll~~~g~~~~~~d~~g~ 141 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDI-------VEMLFTQPNIELNQQNKLGD 141 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHH-------HHHHTTSTTCCCCCCCTTSC
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHH-------HHHHHcCCCCCccccCCCCC
Confidence 455666666666666666666666666665 6666666666666666666666 66666633666666666666
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec
Q 036662 114 TILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN 165 (316)
Q Consensus 114 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~ 165 (316)
||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++
T Consensus 142 tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~~l~ 190 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLLLAKGAR---TDLRNIEKKLAFDMATNAACASLLK 190 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCC---SCCCCTTSCCHHHHCCSHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC---CccccCCCCCHHHHhcchhHHHHHH
Confidence 666666666666666666666666 6666666666666666666666655
No 98
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=2.6e-27 Score=213.43 Aligned_cols=178 Identities=13% Similarity=0.001 Sum_probs=139.9
Q ss_pred HHHHHHH-cCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcc--cccCCCCCcHHHHHHH
Q 036662 4 KLYEAAL-AGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIA--GELDSRKSSALHIASQ 80 (316)
Q Consensus 4 ~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~~d~~g~tpLh~A~~ 80 (316)
+++.|.. .++.+.++++++++. +++||||+|+..|+.++|++|+++|+... ...|..|.||||+|+.
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~----------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~ 137 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGI----------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 137 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTC----------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHcCC----------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHH
Confidence 3444444 356666666665543 45699999999999999999999998321 2345678899999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCC---cccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCcccccc--ccCCCCcHHHHH
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLA---ASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNA--KDDYGMSILHLA 155 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~---~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~--~d~~g~t~Lh~A 155 (316)
.|+.++ +++|++ .+++ .+..+.+ +||||+|+.+|+.++|++|+++|++ ++. +|.+|+||||+|
T Consensus 138 ~G~~ei-------v~~Ll~-~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~---~~~~~~d~~g~TpL~~A 205 (376)
T 2aja_A 138 NGHLHV-------LNRLCE-LAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT---EATAMIQAENYYAFRWA 205 (376)
T ss_dssp TTCHHH-------HHHHHH-SCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG---GHHHHHHHHHHHHHHHH
T ss_pred cCCHHH-------HHHHHh-CCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc---cchhccCCCCCCHHHHH
Confidence 999999 999999 5543 2222233 9999999999999999999999998 777 899999999999
Q ss_pred H-hcCCcceecccccccCCCCCHHHHHHhccCCCcHHHHHHHHHHhCCCcccc
Q 036662 156 V-ADKQIEYYNQSECCYANGFTAWDILANSKRKMKDWEIGELLRRAGAISAKE 207 (316)
Q Consensus 156 ~-~~~~~~~v~~~~~~~~~g~TpL~~a~~~~~~~~~~~i~~~Ll~~ga~~~~~ 207 (316)
+ ..|+.++++-+-.....|.|||++|+. .++.+++++|+++|++.+..
T Consensus 206 a~~~G~~eiv~~Ll~~ga~~~taL~~Aa~----~g~~evv~lL~~~ga~~~~~ 254 (376)
T 2aja_A 206 AVGRGHHNVINFLLDCPVMLAYAEIHEFE----YGEKYVNPFIARHVNRLKEM 254 (376)
T ss_dssp HSTTCCHHHHHHHTTSHHHHHHHHHCTTT----TTTTTHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhCCCccchHHHHHHH----CCCHHHHHHHHhcCcccccc
Confidence 9 999999999111123358999999999 89999999999999887543
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.2e-25 Score=188.28 Aligned_cols=125 Identities=20% Similarity=0.192 Sum_probs=100.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhh-CCCcccccCCCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQ-KPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~tpLh~A~~ 80 (316)
+||||+|+..|+.++|+.|++.+.++ +.+|..|+||||+|+..|+.+++++|+++ |+++ +.+|..|+||||+|+.
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGV---NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAAW 149 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHHH
T ss_pred ccccccccccCcHHHHHHHHhCCCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHHH
Confidence 68899999999999999999888876 44578889999999999999999999988 8887 8888889999999998
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCc
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDS 138 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~ 138 (316)
.|+.++ +++|++ .+++++.+|.+|+||||+|+..|+.++++.|++.|++.
T Consensus 150 ~~~~~~-------v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 150 KGYADI-------VQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HTCHHH-------HHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred cCCHHH-------HHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 888887 899888 68888888889999999999888899999988888873
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=2.5e-25 Score=189.39 Aligned_cols=131 Identities=19% Similarity=0.110 Sum_probs=118.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccC-CCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELD-SRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~tpLh~A~~ 80 (316)
+||||.|++.|+.++|+.|++ +.++ +.+|..|+||||+|+..|+.++|++|+++|+++ +.+| ..|+||||+|+.
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~-~~~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE-DRDV---DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT-TCCT---TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHc-CCCC---CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHH
Confidence 589999999999999999999 7766 455899999999999999999999999999999 6666 889999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ ++++++.+|..|+||||+|+..+ .+..+.||||+|+..|+
T Consensus 121 ~g~~~~-------v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~--------------------~~~~~~~~l~~a~~~g~ 172 (244)
T 3ui2_A 121 YVRPEV-------VEALVE-LGADIEVEDERGLTALELAREIL--------------------KTTPKGNPMQFGRRIGL 172 (244)
T ss_dssp TTCHHH-------HHHHHH-TTCCTTCCCTTCCCHHHHHHHHH--------------------TTCCCSSHHHHHHHHHH
T ss_pred cCCHHH-------HHHHHH-CCCCCCCCCCCCCcHHHHHHHHH--------------------hccCCCCHHHHHHHcCh
Confidence 999988 999999 89999999999999999998622 12468999999999999
Q ss_pred cceec
Q 036662 161 IEYYN 165 (316)
Q Consensus 161 ~~~v~ 165 (316)
.++++
T Consensus 173 ~~iv~ 177 (244)
T 3ui2_A 173 EKVIN 177 (244)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88877
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=2.6e-25 Score=180.87 Aligned_cols=131 Identities=18% Similarity=0.102 Sum_probs=116.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccC-CCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELD-SRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~tpLh~A~~ 80 (316)
+||||.|+..|+.++++.|++ +.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+| ..|+||||+|+.
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~---~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DRDV---DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TSCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHh
Confidence 589999999999999999999 7766 456899999999999999999999999999998 6677 899999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQ 160 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 160 (316)
.|+.++ +++|++ ++++++.+|.+|+||||+|++.++. ..+.+||++|+..|+
T Consensus 120 ~~~~~~-------v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~--------------------~~~~~~l~~a~~~~~ 171 (183)
T 3deo_A 120 YVRPEV-------VEALVE-LGADIEVEDERGLTALELAREILKT--------------------TPKGNPMQFGRRIGL 171 (183)
T ss_dssp TTCHHH-------HHHHHH-HTCCTTCCCTTSCCHHHHHHHHHHT--------------------CCCCSHHHHHHHHHH
T ss_pred cCcHHH-------HHHHHH-cCCCCcCCCCCCCCHHHHHHHhccC--------------------cccccHHHHHHHcCH
Confidence 999988 999999 7899999999999999999874322 346799999999888
Q ss_pred cceec
Q 036662 161 IEYYN 165 (316)
Q Consensus 161 ~~~v~ 165 (316)
.++++
T Consensus 172 ~~i~~ 176 (183)
T 3deo_A 172 EKVIN 176 (183)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=8.9e-25 Score=191.60 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=118.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhhCCCcccc------cCCCCCcHHHHHHHc---CCcccccccHHHHHHHHHhCCCCccc
Q 036662 37 SETPLHVAALLRHKDFAKEILRQKPGIAGE------LDSRKSSALHIASQK---RYVGMKSNRIDVLEELVRARPLAASA 107 (316)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~------~d~~g~tpLh~A~~~---g~~~~~~~~~~iv~~Ll~~~~~~~~~ 107 (316)
+.++||.|+..|+.+.++.|++.|+++ +. .|..|.||||+|+.. |+.++ +++|++ .+++++.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~i-------v~~Ll~-~gadvn~ 221 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPL-------VDFIIQ-NGGHLDA 221 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHH-------HHHHHH-HSSCTTC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHH-------HHHHHh-cCCCCCC
Confidence 346799999999999999999999998 55 699999999999997 66666 999999 7889999
Q ss_pred ccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-ccccccCCCCCHHHHHHh
Q 036662 108 PLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-QSECCYANGFTAWDILAN 183 (316)
Q Consensus 108 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-~~~~~~~~g~TpL~~a~~ 183 (316)
+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++ -+......|.||||+|+.
T Consensus 222 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g~tpLh~A~~ 295 (301)
T 2b0o_E 222 KAADGNTALHYAALYNQPDCLKLLLKGRAL---VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYS 295 (301)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTTSSCCC----
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCChhHHHHh
Confidence 999999999999999999999999999999 9999999999999999999999998 333334479999999988
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=2.5e-24 Score=186.68 Aligned_cols=126 Identities=19% Similarity=0.183 Sum_probs=112.7
Q ss_pred cHHHHHHHcCCHHHHHHHHHcChhhHHh---hhcCCCCCCHHHHHHhc---CCHHHHHHHHhhCCCcccccCCCCCcHHH
Q 036662 3 SKLYEAALAGSVTSLLEFLQKDRLILER---AAMNCPSETPLHVAALL---RHKDFAKEILRQKPGIAGELDSRKSSALH 76 (316)
Q Consensus 3 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~---~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 76 (316)
++|+.|+..|+.+.++.+++.+.++... +..|..|.||||+|+.. |+.+++++|+++|+++ +.+|..|+||||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHH
Confidence 4789999999999999999999875322 23367899999999999 8999999999999998 889999999999
Q ss_pred HHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 036662 77 IASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDD 137 (316)
Q Consensus 77 ~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~ 137 (316)
+|+..|+.++ +++|++ ++++++.+|.+|+||||+|+..|+.+++++|+++|++
T Consensus 211 ~A~~~g~~~~-------v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 211 YCCLTDNAEC-------LKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHTTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHcCCHHH-------HHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999888 999999 8899999999999999999999999999999998875
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=4.1e-24 Score=191.90 Aligned_cols=138 Identities=15% Similarity=0.080 Sum_probs=81.4
Q ss_pred CCCCCCHHHHHHhc-CCHHHHHHHHhhCCCcccccC--CCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccC
Q 036662 34 NCPSETPLHVAALL-RHKDFAKEILRQKPGIAGELD--SRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLI 110 (316)
Q Consensus 34 ~~~g~t~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~d--~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~ 110 (316)
+..+.|+||.|+.. |+.++++.|+++|+++ +..| ..|.||||+|+..|+.++ +++|++ ++++++..|.
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~i-------v~~LL~-~Gadvn~~d~ 266 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLA-------CEFLLQ-NGANVNQADS 266 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCT
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHH-------HHHHHH-cCCCCCCCCC
Confidence 34455667777766 6777777777777666 5555 666777777776666666 777776 5666666667
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec----------ccccccCCCCCHHHH
Q 036662 111 WVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN----------QSECCYANGFTAWDI 180 (316)
Q Consensus 111 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~----------~~~~~~~~g~TpL~~ 180 (316)
.|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++ +....+..+.|++++
T Consensus 267 ~G~TpLh~A~~~g~~~~v~~LL~~Gad---~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i 343 (368)
T 3jue_A 267 AGRGPLHHATILGHTGLACLFLKRGAD---LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDI 343 (368)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHCcCC---CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHH
Confidence 777777777777777777777777766 6666777777777777777666666 233445567777777
Q ss_pred HHh
Q 036662 181 LAN 183 (316)
Q Consensus 181 a~~ 183 (316)
+..
T Consensus 344 ~~~ 346 (368)
T 3jue_A 344 FRD 346 (368)
T ss_dssp ---
T ss_pred HHH
Confidence 655
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=7e-24 Score=198.55 Aligned_cols=137 Identities=19% Similarity=0.163 Sum_probs=115.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHcChhhHHh---hhcCCCCCCHHHHHHh---cCCHHHHHHHHhhCCCcccccCCCCCcHHH
Q 036662 3 SKLYEAALAGSVTSLLEFLQKDRLILER---AAMNCPSETPLHVAAL---LRHKDFAKEILRQKPGIAGELDSRKSSALH 76 (316)
Q Consensus 3 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~---~~~~~~g~t~Lh~A~~---~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 76 (316)
+.||.|+..|+.+.|+.|+++|++++.. ...|..|.||||+|+. .|+.+++++|+++|+++ +.+|..|+||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHH
Confidence 4699999999999999999999887432 1227789999999966 89999999999999998 999999999999
Q ss_pred HHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHH
Q 036662 77 IASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAV 156 (316)
Q Consensus 77 ~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~ 156 (316)
+|+..|+.++ +++|++ ++++++.+|.+|+||||+|+..|+.+++++|+++|++ ++. +|+|.+.
T Consensus 213 ~A~~~g~~~~-------v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~---~~~------~~~h~~~ 275 (497)
T 3lvq_E 213 YAALYNQPDC-------LKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---TFA------FPLHVDY 275 (497)
T ss_dssp HHTTTTCHHH-------HHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------------
T ss_pred HHHHcCCHHH-------HHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC---CCC------Ccceeec
Confidence 9999999988 999999 8999999999999999999999999999999999998 655 5667654
Q ss_pred h
Q 036662 157 A 157 (316)
Q Consensus 157 ~ 157 (316)
.
T Consensus 276 ~ 276 (497)
T 3lvq_E 276 S 276 (497)
T ss_dssp -
T ss_pred c
Confidence 3
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=8.6e-24 Score=189.80 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=115.0
Q ss_pred CcHHHHHHHc-CCHHHHHHHHHcChhhHHhhhcC--CCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHH
Q 036662 2 ESKLYEAALA-GSVTSLLEFLQKDRLILERAAMN--CPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIA 78 (316)
Q Consensus 2 ~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~--~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 78 (316)
+|+||.|+.. |+.++++.|+++|++++. .+ ..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~---~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A 275 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNW---VNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHA 275 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTC---CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCc---cccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 4699999999 999999999999998743 35 78999999999999999999999999998 89999999999999
Q ss_pred HHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhc
Q 036662 79 SQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVAD 158 (316)
Q Consensus 79 ~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~ 158 (316)
+..|+.++ +++|++ .+++++.+|.+|+||||+|+..|+.+++++|++.+.........+..+.|+++.+...
T Consensus 276 ~~~g~~~~-------v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 276 TILGHTGL-------ACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHTCHHH-------HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHcCcHHH-------HHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999988 999999 8999999999999999999999999999999988755433556677888998887665
Q ss_pred C
Q 036662 159 K 159 (316)
Q Consensus 159 ~ 159 (316)
.
T Consensus 348 ~ 348 (368)
T 3jue_A 348 S 348 (368)
T ss_dssp -
T ss_pred H
Confidence 4
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=3.1e-23 Score=149.39 Aligned_cols=93 Identities=27% Similarity=0.336 Sum_probs=82.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcH
Q 036662 36 PSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETI 115 (316)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~ 115 (316)
+|+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++ +++|++ .+.+++.+|.+|+||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~-------v~~Ll~-~ga~~~~~d~~g~t~ 71 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEV-------VKLLLE-AGADVNAKDKNGRTP 71 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCTTSCCH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCCCCccCCCCCCH
Confidence 4789999999999999999999999998 8889999999999999988888 999999 888888999999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCC
Q 036662 116 LHLCVKHNQLEALKVLLENTDD 137 (316)
Q Consensus 116 Lh~A~~~g~~~~v~~Ll~~g~~ 137 (316)
||+|+..|+.+++++|+++|++
T Consensus 72 l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 72 LHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999998874
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=2e-23 Score=156.32 Aligned_cols=108 Identities=22% Similarity=0.196 Sum_probs=101.6
Q ss_pred hcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCC
Q 036662 32 AMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIW 111 (316)
Q Consensus 32 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~ 111 (316)
.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.++ +++|++ .+.+++.+|..
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~-------~~~Ll~-~g~~~~~~d~~ 74 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEI-------VKLLLA-KGADVNARSKD 74 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHH-------HHHHTT-TTCCTTCCCTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHH-------HHHHHH-cCCCCcccCCC
Confidence 35889999999999999999999999999998 8899999999999999999888 999999 78999999999
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcH
Q 036662 112 VETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSI 151 (316)
Q Consensus 112 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~ 151 (316)
|+||||+|+..|+.+++++|+++|++ +|.++..|.||
T Consensus 75 g~tpl~~A~~~~~~~~~~~Ll~~ga~---~n~~~~~~~~~ 111 (115)
T 2l6b_A 75 GNTPEHLAKKNGHHEIVKLLDAKGAD---VNARSWGSSHH 111 (115)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTSSS---HHHHSCCCC--
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCC---CCcCCcccccc
Confidence 99999999999999999999999999 99999999987
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=6.7e-22 Score=171.37 Aligned_cols=127 Identities=20% Similarity=0.156 Sum_probs=110.2
Q ss_pred CCHHHHHHhcCCHHHHHHHHhhCCCcc-----cccCCCCCcHHHHHHHc---CCcccccccHHHHHHHHHhCCCCccccc
Q 036662 38 ETPLHVAALLRHKDFAKEILRQKPGIA-----GELDSRKSSALHIASQK---RYVGMKSNRIDVLEELVRARPLAASAPL 109 (316)
Q Consensus 38 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-----~~~d~~g~tpLh~A~~~---g~~~~~~~~~~iv~~Ll~~~~~~~~~~d 109 (316)
.++||.|+..|+.+.++.+++.|+++. +..|..|.||||+|+.. |+.++ +++|++ .+++++.+|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~-------v~~Ll~-~ga~in~~d 202 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI-------VDFLVQ-NSGNLDKQT 202 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHH-------HHHHHH-HCSCTTCCC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHH-------HHHHHH-CCCCccccC
Confidence 368999999999999999999999952 44589999999999999 66666 999999 789999999
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceecccccccCCCCCHHHHHHhccCCCc
Q 036662 110 IWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYNQSECCYANGFTAWDILANSKRKMK 189 (316)
Q Consensus 110 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~~~~~~~~g~TpL~~a~~~~~~~~ 189 (316)
..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+.. +
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~------------------------------~ 249 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLLLRGKAS---IEIANESGETPLDIAKRL------------------------------K 249 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHT------------------------------T
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCccCCCCCHHHHHHHc------------------------------C
Confidence 9999999999999999999999999999 888887777777766664 4
Q ss_pred HHHHHHHHHHhCCCcc
Q 036662 190 DWEIGELLRRAGAISA 205 (316)
Q Consensus 190 ~~~i~~~Ll~~ga~~~ 205 (316)
+.+++++|+++|++..
T Consensus 250 ~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 250 HEHCEELLTQALSGRF 265 (278)
T ss_dssp CHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCCCC
Confidence 5678888888888653
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=3.5e-22 Score=187.06 Aligned_cols=135 Identities=16% Similarity=0.120 Sum_probs=111.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhhCCCccccc------CCCCCcHHHHHHH---cCCcccccccHHHHHHHHHhCCCCccc
Q 036662 37 SETPLHVAALLRHKDFAKEILRQKPGIAGEL------DSRKSSALHIASQ---KRYVGMKSNRIDVLEELVRARPLAASA 107 (316)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~------d~~g~tpLh~A~~---~g~~~~~~~~~~iv~~Ll~~~~~~~~~ 107 (316)
..+.||.|+..|+.+.++.|++.|+++ +.. |..|.||||+|+. .|+.++ +++|++ ++++++.
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~-------v~~Ll~-~ga~vn~ 202 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPL-------VDFIIQ-NGGHLDA 202 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHH-------HHHHHH-HSCCTTC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHH-------HHHHHH-cCCCCCc
Confidence 346799999999999999999999998 666 8899999999976 777777 999999 8899999
Q ss_pred ccCCCCcHHHHHHhcCCHHHHHHHHhcCCCccccccccCCCCcHHHHHHhcCCcceec-ccccccCCCCCHHHHHHh
Q 036662 108 PLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNAKDDYGMSILHLAVADKQIEYYN-QSECCYANGFTAWDILAN 183 (316)
Q Consensus 108 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~-~~~~~~~~g~TpL~~a~~ 183 (316)
+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++++ -+...-.-..||+|.+..
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRAL---VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYS 276 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCC---CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeecc
Confidence 999999999999999999999999999999 9999999999999999999999998 122222223367776543
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.5e-21 Score=140.48 Aligned_cols=91 Identities=22% Similarity=0.262 Sum_probs=84.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~---n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHH
Confidence 579999999999999999999999987 445899999999999999999999999999998 8999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPL 103 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~ 103 (316)
.|+.++ +++|++ .++
T Consensus 78 ~~~~~~-------~~~Ll~-~ga 92 (93)
T 1n0q_A 78 NGHLEV-------VKLLLE-AGA 92 (93)
T ss_dssp TTCHHH-------HHHHHH-TTC
T ss_pred cCCHHH-------HHHHHH-cCC
Confidence 999988 999999 554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=3.7e-21 Score=143.95 Aligned_cols=104 Identities=19% Similarity=0.180 Sum_probs=95.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 1 MESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 1 m~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++||||.|+..|+.++++.|++++.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 9 g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAEEVKKLLSKGADV---NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLAKK 84 (115)
T ss_dssp SCCHHHHHHHHTCHHHHHHHTTTTCCS---SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHH
Confidence 479999999999999999999999887 445899999999999999999999999999998 8999999999999999
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHH
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETIL 116 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~L 116 (316)
.|+.++ +++|++ ++++++.++..|.+|-
T Consensus 85 ~~~~~~-------~~~Ll~-~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEI-------VKLLDA-KGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHH-------HHHHHT-TSSSHHHHSCCCC---
T ss_pred CCCHHH-------HHHHHH-cCCCCCcCCccccccc
Confidence 999888 999999 8999999999998873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=1.1e-19 Score=135.04 Aligned_cols=91 Identities=15% Similarity=0.204 Sum_probs=81.5
Q ss_pred hcCCCCCCHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCC
Q 036662 32 AMNCPSETPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIW 111 (316)
Q Consensus 32 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~ 111 (316)
..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.++ +++|++ .+.+++.+|..
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~-------v~~Ll~-~ga~~~~~d~~ 89 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEV-------VKLLLE-AGADVXAQDKF 89 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHH-------HHHHHH-TTCCTTCCCTT
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHH-------HHHHHH-cCCCccccccC
Confidence 35788999999999999999999999999998 8889999999999999998888 999999 78889999999
Q ss_pred CCcHHHHHHhcCCHHHHHHH
Q 036662 112 VETILHLCVKHNQLEALKVL 131 (316)
Q Consensus 112 g~t~Lh~A~~~g~~~~v~~L 131 (316)
|+||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=4.5e-19 Score=131.62 Aligned_cols=91 Identities=21% Similarity=0.268 Sum_probs=81.4
Q ss_pred ccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCCHHHHHHHHhcCCCcccccc
Q 036662 64 AGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQLEALKVLLENTDDSEFLNA 143 (316)
Q Consensus 64 ~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~ 143 (316)
....|.+|.||||+|+..|+.++ +++|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~-------v~~Ll~-~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~---~~~ 85 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDE-------VRILMA-NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD---VXA 85 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHH-------HHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTC
T ss_pred ccccCCccchHHHHHHHcCCHHH-------HHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccc
Confidence 36678999999999999999988 999999 7889999999999999999999999999999999999 999
Q ss_pred ccCCCCcHHHHHHhcCCcceec
Q 036662 144 KDDYGMSILHLAVADKQIEYYN 165 (316)
Q Consensus 144 ~d~~g~t~Lh~A~~~~~~~~v~ 165 (316)
+|.+|+||||+|+..|+.++++
T Consensus 86 ~d~~g~tpl~~A~~~~~~~~~~ 107 (110)
T 2zgd_A 86 QDKFGKTAFDISIDNGNEDLAE 107 (110)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHH
T ss_pred cccCCCcHHHHHHHcCCHHHHH
Confidence 9999999999999999887653
No 115
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=53.37 E-value=47 Score=25.64 Aligned_cols=106 Identities=12% Similarity=0.021 Sum_probs=56.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcChhhHHhhhcCCCCC-CHHHHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHH
Q 036662 2 ESKLYEAALAGSVTSLLEFLQKDRLILERAAMNCPSE-TPLHVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQ 80 (316)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~-t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 80 (316)
++.+-.|...|+++....+.+...+ ..-+ +.=..|...|++++++.-..+-.|. . .-+.+...
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~--------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~-~-------~L~~Ly~~ 72 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLND--------SITWERLIQEALAQGNASLAEMIYQTQHSF-D-------KLSFLYLV 72 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCC--------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCH-H-------HHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCC--------HHHHHHHHHHHHHcCChHHHHHHHHHhCCH-H-------HHHHHHHH
Confidence 3556778888888877776553211 0011 1224566777888888777765554 1 23444444
Q ss_pred cCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHhcCC-HHHHHHHHhcC
Q 036662 81 KRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVKHNQ-LEALKVLLENT 135 (316)
Q Consensus 81 ~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~~v~~Ll~~g 135 (316)
.|+.+- ++.+.+ +-....+-..+.|.+-..|+ .+++++|.+.|
T Consensus 73 tg~~e~-------L~kla~-----iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 73 TGDVNK-------LSKMQN-----IAQTREDFGSMLLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp HTCHHH-------HHHHHH-----HHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred hCCHHH-------HHHHHH-----HHHHCccHHHHHHHHHHcCCHHHHHHHHHHCC
Confidence 555544 444433 11111222345666666665 34666666643
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=40.96 E-value=18 Score=20.04 Aligned_cols=18 Identities=22% Similarity=0.241 Sum_probs=12.7
Q ss_pred HHHHHHcCCHHHHHHHHH
Q 036662 5 LYEAALAGSVTSLLEFLQ 22 (316)
Q Consensus 5 L~~A~~~g~~~~v~~Ll~ 22 (316)
++.||..|+.+.++.|=.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 566777788877777643
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=30.93 E-value=97 Score=27.42 Aligned_cols=54 Identities=13% Similarity=0.178 Sum_probs=41.4
Q ss_pred HHHHHcCCHHHHHHHHHcChhhHHh---------h--hcCCCCCCHHHHHHhcCCHHHHHHHHhh
Q 036662 6 YEAALAGSVTSLLEFLQKDRLILER---------A--AMNCPSETPLHVAALLRHKDFAKEILRQ 59 (316)
Q Consensus 6 ~~A~~~g~~~~v~~Ll~~~~~~~~~---------~--~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 59 (316)
+..+..|+...|+..+..|.+.... + ..-..|.|.+|+|.+..+-+++..|+..
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 4567789999999999987654221 1 1123599999999999999999999973
No 118
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=23.24 E-value=98 Score=16.71 Aligned_cols=23 Identities=22% Similarity=0.194 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 036662 287 RRIFMWILMGTRDAVFEFNRYKF 309 (316)
Q Consensus 287 ~~~~~~~~~~~m~~~f~~~~~~~ 309 (316)
+-.+.|-+++..+.+..+..|+|
T Consensus 14 RTSLy~GLLlifvlavlFssyff 36 (37)
T 3arc_L 14 RTSLYLGLLLILVLALLFSSYFF 36 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhhhhcc
Confidence 34455666667777888888876
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=20.81 E-value=4.4e+02 Score=23.33 Aligned_cols=64 Identities=22% Similarity=0.229 Sum_probs=39.0
Q ss_pred HHHHhcCCHHHHHHHHhhCCCcccccCCCCCcHHHHHHHcCCcccccccHHHHHHHHHhCCCCcccccCCCCcHHHHHHh
Q 036662 42 HVAALLRHKDFAKEILRQKPGIAGELDSRKSSALHIASQKRYVGMKSNRIDVLEELVRARPLAASAPLIWVETILHLCVK 121 (316)
Q Consensus 42 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 121 (316)
...+..|+...|+.-+..|.|+..+ -|+-..+ ||+ .+... .-|.|.+|+|++
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~-----lt~~e~~------------------lln-~~~af----~~g~tlvhlair 78 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQ-----LTADEVR------------------LLN-RPSAF----DVGYTLVHLAIR 78 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCC-----CCHHHHH------------------HHC-CTTTC----CTTCCHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcc-----cCHHHHH------------------HhC-CCccc----ccCchhhhhhhh
Confidence 3455668999999999998887221 2322222 223 33322 236777777777
Q ss_pred cCCHHHHHHHHh
Q 036662 122 HNQLEALKVLLE 133 (316)
Q Consensus 122 ~g~~~~v~~Ll~ 133 (316)
..+.+++..|+.
T Consensus 79 ~~r~~~l~~ll~ 90 (454)
T 3zrh_A 79 FQRQDMLAILLT 90 (454)
T ss_dssp TTCHHHHHHHHH
T ss_pred hhhhhHHHHhhh
Confidence 777777777765
Done!