Query 036665
Match_columns 440
No_of_seqs 218 out of 1461
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 06:39:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r5e_A Transaldolase; pentose 100.0 8.2E-94 2.8E-98 724.3 32.5 352 77-433 2-360 (360)
2 3clm_A Transaldolase; YP_20865 100.0 1.5E-91 5.2E-96 710.3 33.8 344 76-428 2-351 (352)
3 3cq0_A Putative transaldolase 100.0 8.7E-65 3E-69 512.2 24.3 306 77-434 14-335 (339)
4 2e1d_A Transaldolase; pentose 100.0 3E-64 1E-68 507.0 25.5 308 71-434 4-329 (331)
5 3cwn_A Transaldolase B; direct 100.0 1.5E-63 5.1E-68 502.9 25.8 299 77-431 23-336 (337)
6 3tkf_A Transaldolase; structur 100.0 3.1E-64 1.1E-68 507.7 20.8 307 77-432 28-345 (345)
7 3m16_A Transaldolase; dimer, m 100.0 1.5E-63 5.2E-68 500.3 22.5 310 75-434 6-327 (329)
8 3hjz_A Transaldolase B; parach 100.0 2.5E-63 8.7E-68 499.5 21.2 312 77-437 4-327 (334)
9 1vpx_A Protein (transaldolase 100.0 7.2E-53 2.5E-57 405.0 18.5 223 78-429 5-229 (230)
10 1wx0_A Transaldolase; structur 100.0 6E-52 2.1E-56 397.3 15.1 216 90-390 3-220 (223)
11 1l6w_A Fructose-6-phosphate al 100.0 8.7E-51 3E-55 388.5 16.9 208 90-391 3-214 (220)
12 3r8r_A Transaldolase; pentose 100.0 3.9E-50 1.3E-54 381.6 16.4 208 90-389 3-211 (212)
13 3s1x_A Probable transaldolase; 100.0 1.5E-49 5E-54 380.1 16.1 212 90-391 3-215 (223)
14 3lab_A Putative KDPG (2-keto-3 62.9 23 0.00078 33.3 8.0 71 186-273 21-94 (217)
15 4e38_A Keto-hydroxyglutarate-a 52.3 46 0.0016 31.4 8.3 70 186-272 42-114 (232)
16 1wv2_A Thiazole moeity, thiazo 50.4 44 0.0015 32.4 7.9 72 177-249 74-155 (265)
17 1olt_A Oxygen-independent copr 41.1 49 0.0017 33.6 7.1 60 175-240 140-214 (457)
18 3o6c_A PNP synthase, pyridoxin 37.8 2.8E+02 0.0097 26.7 11.4 81 174-279 65-159 (260)
19 3tml_A 2-dehydro-3-deoxyphosph 33.4 1.2E+02 0.0043 29.4 8.2 75 172-248 13-106 (288)
20 4g9p_A 4-hydroxy-3-methylbut-2 33.3 1.4E+02 0.0048 30.6 8.8 81 172-254 19-106 (406)
21 3qvq_A Phosphodiesterase OLEI0 31.6 36 0.0012 31.7 3.9 46 79-125 202-248 (252)
22 3gk0_A PNP synthase, pyridoxin 30.3 3.9E+02 0.013 26.0 12.2 80 174-278 94-189 (278)
23 3fs2_A 2-dehydro-3-deoxyphosph 29.6 1.6E+02 0.0056 28.8 8.3 72 172-245 37-127 (298)
24 2htm_A Thiazole biosynthesis p 28.8 1.2E+02 0.0042 29.3 7.1 64 184-249 71-144 (268)
25 3sr7_A Isopentenyl-diphosphate 27.2 2.1E+02 0.0071 28.6 8.9 70 174-249 144-229 (365)
26 1of8_A Phospho-2-dehydro-3-deo 27.2 2.7E+02 0.0094 28.1 9.6 75 171-246 63-168 (370)
27 1zco_A 2-dehydro-3-deoxyphosph 25.9 2.2E+02 0.0074 27.0 8.3 69 177-248 24-105 (262)
28 2nwr_A 2-dehydro-3-deoxyphosph 23.8 1.3E+02 0.0044 28.8 6.3 69 176-246 3-91 (267)
29 3no3_A Glycerophosphodiester p 23.7 45 0.0015 30.8 3.0 45 79-125 189-234 (238)
30 3sz8_A 2-dehydro-3-deoxyphosph 22.8 1.5E+02 0.0051 28.8 6.6 72 173-246 17-107 (285)
31 3noy_A 4-hydroxy-3-methylbut-2 22.4 6.1E+02 0.021 25.6 15.4 74 173-249 28-104 (366)
32 2v4i_A Glutamate N-acetyltrans 21.1 1.3E+02 0.0043 27.4 5.3 48 292-350 69-116 (173)
33 3f4w_A Putative hexulose 6 pho 20.4 1.1E+02 0.0037 27.0 4.8 51 187-239 10-63 (211)
No 1
>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.2e-94 Score=724.27 Aligned_cols=352 Identities=47% Similarity=0.779 Sum_probs=338.3
Q ss_pred CcHHHHHhhcCcccccccccccc---ccHHHHHh-CCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHH
Q 036665 77 TTLHDLYEQEGQSPWYDNLCRPV---TDLLPLIA-SGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELV 152 (440)
Q Consensus 77 ~~l~~l~~~~gqs~W~D~i~R~~---~el~~li~-~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~ 152 (440)
|+|.+|. ++|||+|+|+|+|++ ++|+++|+ .|++|+||||+||.+|+.++|.|+++|++++.+|++.+++|+.|.
T Consensus 2 ~~l~~L~-~~g~siw~D~l~R~~l~sGdl~~~I~~~~~~gaTTNPsi~~kAi~~~~~Y~~~i~~~~~~~~~~~~~~~~L~ 80 (360)
T 3r5e_A 2 SHIDDLA-QLGTSTWLDDLSRERITSGNLSQVIEEKSVVGVTTNPAIFAAAMSKGDSYDAQIAELKAAGASVDQAVYAMS 80 (360)
T ss_dssp CHHHHHH-HTTEEEEESCCCHHHHHTSHHHHHHHHHCCCEEECCHHHHHHHHHHCSTTHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ChHHHHH-HcCcEEEeeCCcccccccccHHHHHHhCCCCeecCCHHHHHHHHhCCHHHHHHHHHHHHhcCChhhHHHHhH
Confidence 6799996 799999999999998 58998885 599999999999999997789999999999999999999999999
Q ss_pred HHHHHHHHHHhHHhhhhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCce
Q 036665 153 IKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISV 232 (440)
Q Consensus 153 i~di~~a~d~l~p~~~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~v 232 (440)
.+|++.+||+|+|+|+.+++++|+||+||||++++|+++||++|++|++++++||||||||+||+||+||++|+++||+|
T Consensus 81 ~~dv~~A~D~L~~~~e~~~~~~G~VS~EV~prla~d~e~mi~eA~~L~~li~~~nv~IKIP~T~eGl~A~~~L~~eGI~v 160 (360)
T 3r5e_A 81 IDDVRNACDLFTGIFESSNGYDGRVSIEVDPRISADRDATLAQAKELWAKVDRPNVMIKIPATPGSLPAITDALAEGISV 160 (360)
T ss_dssp HHHHHHHHHHTHHHHHHTTTSSSEEEEECCGGGTTCHHHHHHHHHHHHHHHCCTTEEEEEESSTTHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccEEEEecccccCCHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHHHHHHcCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHHc--CCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHHH
Q 036665 233 NVTLIFSLARYEEVIDAYLDGLEAS--GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQL 310 (440)
Q Consensus 233 N~TlIFS~~Qa~a~aqA~lagl~~a--G~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~~ 310 (440)
|+|+|||++||++|+|||++|||++ .|+|++++++|+|+||||+|+++|++++++|++++.+++|+.+|+|++++|++
T Consensus 161 NvTliFS~~Qa~a~~~A~~~Gle~~~~~G~d~s~~~sV~S~FvsRiD~~~d~~l~~~g~~~~~~l~gk~giAnak~aY~~ 240 (360)
T 3r5e_A 161 NVTLIFSVARYREVIAAFIEGIKQAAANGHDVSKIHSVASFFVSRVDVEIDKRLEAIGSDEALALRGKAGVANAQRAYAV 240 (360)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEECHHHHHHHHHHHHHHCCHHHHHTTTCHHHHHHHHHHHH
T ss_pred eeeeccCHHHHHHHHHHHHHHHHHHHhcCCCcccCceEEEEeHHHHHHHHHHHHhhcCCchhhHhCccHHHHHHHHHHHH
Confidence 9999999999999999999999852 34999999999999999999999999999998888889999999999999999
Q ss_pred HHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHhCCccc-cccccchhHHh
Q 036665 311 YQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAE 389 (440)
Q Consensus 311 y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~~~~~~-~~l~~~~~~a~ 389 (440)
|++.|+| +.|++ |+++||+||||||+|||+|++++||.+|+|||+|||||++|+++|.+||.+. .++....++++
T Consensus 241 ~~~~~~~---~~L~~-Ga~~qR~LwASTgvK~p~y~d~~YV~~Lig~~tVnT~P~~tl~A~~dhg~~~~~tl~~~~~~a~ 316 (360)
T 3r5e_A 241 YKELFDA---AELPE-GANTQRPLWASTGVKNPAYAATLYVSELAGPNTVNTMPEGTIDAVLEQGNLHGDTLSNSAAEAD 316 (360)
T ss_dssp HHHHHHH---CCCCT-TCCCCEEEEECCSCCSTTSCTTHHHHTTCCTTEEEEECHHHHHHHHHHCCCCSCCSTTCHHHHH
T ss_pred HHHHhcc---chhhC-CCccceeeeeccccCCCcCCCcccHHHhcCCCcccCCCHHHHHHHHhcCCcccCCCCCCHHHHH
Confidence 9999988 78888 9999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred hHHhHhHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036665 390 GIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKAN 433 (440)
Q Consensus 390 ~~~~~l~~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~~ 433 (440)
++++.|.+.|||++.++++|++|||++|.++|++|++.|++|++
T Consensus 317 ~~l~~l~~~gid~~~v~~~L~~eGv~~F~~~~~~Ll~~~~~k~~ 360 (360)
T 3r5e_A 317 AVFSQLEALGVDLADVFQVLETEGVDKFVASWSELLESMEARLK 360 (360)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999874
No 2
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae}
Probab=100.00 E-value=1.5e-91 Score=710.34 Aligned_cols=344 Identities=42% Similarity=0.705 Sum_probs=329.5
Q ss_pred cCcHHHHHhhcCcccccccccccc---ccHHHHHhCCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHH
Q 036665 76 RTTLHDLYEQEGQSPWYDNLCRPV---TDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELV 152 (440)
Q Consensus 76 ~~~l~~l~~~~gqs~W~D~i~R~~---~el~~li~~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~ 152 (440)
.|+|++|. ++|||+|||+++|++ .+|+++++.|++|+|||||||.||+.+++.|+++|++++.+|++.+++|+.|+
T Consensus 2 ~~~l~~l~-~~g~s~WlD~l~r~~ldtgdl~~~~~~g~~GvTTNPsl~~kA~~~~~~y~~~i~~~~~~~~~~~~~~~~l~ 80 (352)
T 3clm_A 2 MTILSDVK-ALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKRQNLSPKQRYETMA 80 (352)
T ss_dssp TTHHHHHH-HTTEEEEESCCCHHHHHTSHHHHHHTTTCCCEECCHHHHHHHHHHCTTHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred CChHHHHH-HCCCeEecCCCchhhccccCHHHHHhcCCCeEecCHHHHHHHHhcCCcHHHHHHHHHHhCCCHhHHHHHHH
Confidence 36799995 799999999999998 47999999999999999999999997779999999999999999999999999
Q ss_pred HHHHHHHHHHhHHhhhhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCce
Q 036665 153 IKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISV 232 (440)
Q Consensus 153 i~di~~a~d~l~p~~~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~v 232 (440)
++|++.+||+|.|+|+.++|++|+||+||||++++|+++||++|++|+++++|||||||||+||+||+||++|+++||+|
T Consensus 81 ~~dv~~a~d~l~~~~e~~~~v~G~VS~EVdprla~D~e~~i~eA~~L~~~i~r~nv~IKIPaT~eGi~A~~~L~~eGI~v 160 (352)
T 3clm_A 81 VADVRAACDVCLAEHESTGGKTGFVSLEVSPELAKDAQGTVEEARRLHAAIARKNAMIKVPATDAGIDALETLVSDGISV 160 (352)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSCCEEEECCGGGTTCHHHHHHHHHHHHHHHCCTTEEEEEECSHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeeEEEEeccccCCCHHHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHHHCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHH---cCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHH
Q 036665 233 NVTLIFSLARYEEVIDAYLDGLEA---SGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQ 309 (440)
Q Consensus 233 N~TlIFS~~Qa~a~aqA~lagl~~---aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~ 309 (440)
|+|||||++||++|++||++|+++ +| .|++++++||||||||||+++|+.++. ..+|..+|++++++|+
T Consensus 161 NvTLiFS~~Qa~a~aeA~lag~~~~~~aG-~~~~~~as~iSpFVgRiD~~~d~~~~~-------~~~g~~gv~~~~~iy~ 232 (352)
T 3clm_A 161 NLTLLFSRAQTLKAYAAYARGIAKRLAAG-QSVAHIQVVASFFISRVDSALDATLPD-------RLKGKTAIALAKAAYQ 232 (352)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCCEEEEEECHHHHHHHGGGSCG-------GGTTTHHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHHHHHHHhcC-CCcccCceEEecccchHhhhhcccccc-------ccccHHHHHHHHHHHH
Confidence 999999999999999999999975 46 899999999999999999999988753 4678889999999999
Q ss_pred HHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHhCCccccccccchhHHh
Q 036665 310 LYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAE 389 (440)
Q Consensus 310 ~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~~~~~~~~l~~~~~~a~ 389 (440)
+|++.|.++||+.|++.|+++||+||||||||||+|+++.|+.+|+|||+||||||++|++|.+||.+.++++.|.++++
T Consensus 233 ~y~~~~~~~~~~~Laa~g~~~qr~LwAsT~vk~~~~~~~~~v~~L~G~d~v~Tip~~~l~~l~~~~~~~~~l~~~~~da~ 312 (352)
T 3clm_A 233 DWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSLIGVHTVNTVPDATLKAFIDHGTAKATLTESADEAR 312 (352)
T ss_dssp HHHHHHHSHHHHHHHTTTCCCCEEEEESCSCCCTTSCTTHHHHHCCCTTEEEEECHHHHHHHHHHCCCCCCTTTTHHHHH
T ss_pred HHHhhcCCchHHHHHhccCccccccccCceecCcccCchHHHHHHhCCCEEeCCCHHHHHHHHhCCChhhhhcchhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHhHhHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036665 390 GIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 428 (440)
Q Consensus 390 ~~~~~l~~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l 428 (440)
..++++...|+|++.++++|++|||++|+++|++|++.|
T Consensus 313 ~~l~~~~~~~i~~d~~~~~ll~eGi~~F~~~~~~L~~~i 351 (352)
T 3clm_A 313 ARLAEIAALGIDVETLAARLQEDGLKQFEEAFEKLLAPL 351 (352)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888999999999999999999999999999999999754
No 3
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-65 Score=512.22 Aligned_cols=306 Identities=22% Similarity=0.311 Sum_probs=249.1
Q ss_pred CcHHHHHhhcCccccccccccccccHHHHHhCCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHHHHHH
Q 036665 77 TTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDI 156 (440)
Q Consensus 77 ~~l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di 156 (440)
|.|.+|. ++|+++|+|.. +++.+.+.++.|+|||||||.+|+. .+.|+++|++++..|+..... ..+++
T Consensus 14 ~~L~~L~-~~gt~i~lDT~-----dl~~i~~~~~~GvTTNPsLi~ka~~-~~~y~~~i~~~~~~~~~~~~~----~~~~i 82 (339)
T 3cq0_A 14 SSLEQLK-KAGTHVVADSG-----DFEAISKYEPQDSTTNPSLILAASK-LEKYARFIDAAVEYGRKHGKT----DHEKI 82 (339)
T ss_dssp CHHHHHH-HTTCEEEEECS-----CGGGTGGGCCSEEECCHHHHHHHHT-CGGGHHHHHHHHHHHHHHCSS----HHHHH
T ss_pred hHHHHHH-HcCCEEEecCC-----CHHHHHhhCCCCeecCHHHHHHHhC-ChhHHHHHHHHHHHHhhcCCC----HHHHH
Confidence 6899995 79999999944 4555556789999999999999987 799999999998754321111 12678
Q ss_pred HHHHHHhHHhh--hhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhh-----cCCCcEEEEcCCCcchHHHHHHH-HHC
Q 036665 157 QDACKLFESIY--DETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAPCVPSIKEV-ISQ 228 (440)
Q Consensus 157 ~~a~d~l~p~~--~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~-----v~r~nv~IKIPaT~eGi~Ai~~L-~~~ 228 (440)
+.+||.|.|.| +.+++++|+||+||||++++|+++||++|++|+++ |+|||||||||+||+||+|+++| +++
T Consensus 83 ~~a~D~l~v~~g~ei~~~v~G~VS~EV~prls~D~e~~i~eA~~L~~l~~~~gi~r~nv~IKIPaT~eGi~A~~~L~~~e 162 (339)
T 3cq0_A 83 ENAMDKILVEFGTQILKVVPGRVSTEVDARLSFDKKATVKKALHIIKLYKDAGVPKERVLIKIASTWEGIQAARELEVKH 162 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEeeccccCCHHHHHHHHHHHHHHhHhhCCCCCcEEEEeCCCHHHHHHHHHHHHHc
Confidence 89999999999 45899999999999999999999999999999997 89999999999999999999999 999
Q ss_pred CCceEEeecCCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHH
Q 036665 229 GISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAY 308 (440)
Q Consensus 229 GI~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y 308 (440)
||+||+|||||+.||++|++| | ++||||||||||+|+++.+... . ...+..+|++++.+|
T Consensus 163 GI~vNvTLiFS~~Qa~aaa~A--------G-------a~~iSpFVgRidd~~~~~~~~~--~---~~~~d~Gv~~v~~iy 222 (339)
T 3cq0_A 163 GIHCNMTLLFSFTQAVACAEA--------N-------VTLISPFVGRIMDFYKALSGKD--Y---TAETDPGVLSVKKIY 222 (339)
T ss_dssp CCCEEEEEECCHHHHHHHHHT--------T-------CSEEEEBSHHHHHHHHHC---C--C---CTTTCHHHHHHHHHH
T ss_pred CCceeEeeeCCHHHHHHHHHc--------C-------CcEEEecccHHHHHhhhhcccc--c---ccccChHHHHHHHHH
Confidence 999999999999999999997 8 8999999999999998876431 1 123344577788899
Q ss_pred HHHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHH-hCCccccccccchhH
Q 036665 309 QLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFV-DHGAVSRTIDLNVSE 387 (440)
Q Consensus 309 ~~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~-~~~~~~~~l~~~~~~ 387 (440)
++|++ +|+++ +||+| |+|| +.|+.+|+|||++ ||||++|++|. +|+.+.++++...+.
T Consensus 223 ~~y~~------------~~~~T-~v~~A--S~r~-----~~~V~~LaG~d~v-Tipp~~l~~l~~~~~~v~~~l~~~~~~ 281 (339)
T 3cq0_A 223 SYYKR------------HGYAT-EVMAA--SFRN-----LDELKALAGIDNM-TLPLNLLEQLYESTDPIENKLNSESAK 281 (339)
T ss_dssp HHHHH------------HTCCC-EEEEB--CCCS-----HHHHHHHTTSSEE-EEEHHHHHHHHHCCCCCCCCCCHHHHG
T ss_pred HHHHH------------cCCCc-EEEec--CCCC-----HHHHHHhhCCCEE-ECCHHHHHHHHhCCCccccccChhhhh
Confidence 99974 57765 78888 5555 5689999999999 99999999998 567777777652221
Q ss_pred HhhH-HhHh--HhhcCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036665 388 AEGI-YSAL--EKLGIDWN----YVGTQLELEGVDSFKKSFDSLLDTLQEKANS 434 (440)
Q Consensus 388 a~~~-~~~l--~~~~id~~----~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~~~ 434 (440)
.... ...+ ++..|+|. .++.+|++|||++|+++|++|++.|++|+..
T Consensus 282 ~~~~~~~~~~~~e~~fr~~~~~d~ma~~~l~eGi~~F~~~~~~L~~~i~~~~~~ 335 (339)
T 3cq0_A 282 EEGVEKVSFINDEPHFRYVLNEDQMATEKLSDGIRKFSADIEALYKLVEEKMLE 335 (339)
T ss_dssp GGCCCCCCCTTCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccccCChHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1100 0122 44555664 5799999999999999999999999998753
No 4
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A
Probab=100.00 E-value=3e-64 Score=507.02 Aligned_cols=308 Identities=23% Similarity=0.278 Sum_probs=252.7
Q ss_pred CCCCccCcHHHHHhhcCccccccccccccccHHHHHhCCCCccccChHHHHHHHhCCcchHHHHHHHHHc----CCChHH
Q 036665 71 GSSAKRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQS----GKDIEA 146 (440)
Q Consensus 71 ~~~~~~~~l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~----g~~~~e 146 (440)
|+..-.|.|.+|. +++ .+|+|... ++.+.+.++.|+|||||||.+|+. .+.|+++|++++.. |.+.
T Consensus 4 ~~~~m~~~L~~L~-~~t-~~~~Dt~d-----l~~i~~~~~~GvTTNPsli~ka~~-~~~y~~~i~~~~~~~~~~~~~~-- 73 (331)
T 2e1d_A 4 GSSGMESALDQLK-QFT-TVVADTGD-----FNAIDEYKPQDATTNPSLILAAAQ-MPAYQELVEEAIAYGKKLGGPQ-- 73 (331)
T ss_dssp -----CCHHHHHT-TTS-EEEEECSC-----GGGTTTTCCSEEECCHHHHHHHHT-SGGGHHHHHHHHHHHHHHCSSH--
T ss_pred hhhhhhHHHHHHH-HcC-EEEecCcC-----HHHHHhhCCCCeecCHHHHHHHcC-CchHHHHHHHHHHHHhhcCCCH--
Confidence 3444458899995 576 47898763 444446789999999999999986 78899999999864 4333
Q ss_pred HHHHHHHHHHHHHHHHhHHhh--hhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhh-----cCCCcEEEEcCCCcchH
Q 036665 147 AYWELVIKDIQDACKLFESIY--DETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAPCV 219 (440)
Q Consensus 147 ~y~~L~i~di~~a~d~l~p~~--~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~-----v~r~nv~IKIPaT~eGi 219 (440)
.+|++.+||+|.|.| +.+++++|+||+||||++++|+++||++|++|+++ |++||||||||+||+||
T Consensus 74 ------~~~v~~a~D~l~v~~g~ei~~~v~G~VS~EV~prla~d~e~~i~eA~~L~~l~~~~gi~r~nv~IKIPaT~eGi 147 (331)
T 2e1d_A 74 ------EEQIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKLSSTWEGI 147 (331)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHhccCCCceEEEeccccCCCHHHHHHHHHHHHHHhHhhCCCCCcEEEEeCCCHHHH
Confidence 268999999999999 45888999999999999999999999999999998 89999999999999999
Q ss_pred HHHHHHHHC-CCceEEeecCCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchH
Q 036665 220 PSIKEVISQ-GISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGK 298 (440)
Q Consensus 220 ~Ai~~L~~~-GI~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~ 298 (440)
+|+++|+++ ||+||+|||||+.||++|++| | ++||||||||||+|+++... .++ ....|.
T Consensus 148 ~A~~~L~~e~GI~vNvTliFS~~Qa~aaa~A--------G-------a~~iSpFVgRidd~~~~~~g---~~~-~~~~~d 208 (331)
T 2e1d_A 148 QAGKELEEQHGIHCNMTLLFSFAQAVACAEA--------G-------VTLISPFVGRILDWHVANTD---KKS-YEPQGD 208 (331)
T ss_dssp HHHHHHHHHHCCCEEEEEECSHHHHHHHHHH--------T-------CSEEEEBSHHHHHHHHHHSS---CCC-CCGGGC
T ss_pred HHHHHHHHhcCCceeEeeeCCHHHHHHHHHc--------C-------CcEEEecccHHHHHHHhhcC---ccc-ccccCC
Confidence 999999999 999999999999999999998 7 89999999999999987743 211 123445
Q ss_pred HHHHHHHHHHHHHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHH-hCCcc
Q 036665 299 AAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFV-DHGAV 377 (440)
Q Consensus 299 ~~Ia~a~~~y~~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~-~~~~~ 377 (440)
.+|++++.+|++|++ +|+++ +||+| |+|| +.|+.+|+|||++ ||||++|++|. +|+.+
T Consensus 209 ~gv~~v~~iy~~y~~------------~~~~T-~v~~A--S~r~-----~~~V~~LaG~d~v-Tipp~~l~~l~~~~~~v 267 (331)
T 2e1d_A 209 PGVKSVTKIYNYYKK------------FGYKT-IVMGA--SFRN-----TGEIKALAGCDFL-TISPKLLGELLKDNSKL 267 (331)
T ss_dssp HHHHHHHHHHHHHHH------------TTCCC-EEEEB--CCSS-----HHHHHTTTTSSEE-EECHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHH------------cCCCe-EEecc--CcCC-----HHHHHHhhCCCEE-ECCHHHHHHHHhcCCcc
Confidence 567888889999974 57865 78888 5655 5689999999999 99999999998 67777
Q ss_pred ccccccchh----HHhhHHhHhH-hhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036665 378 SRTIDLNVS----EAEGIYSALE-KLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANS 434 (440)
Q Consensus 378 ~~~l~~~~~----~a~~~~~~l~-~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~~~ 434 (440)
.++++...+ .....+++.. ..+++.+.++.+|++|||++|+++|++|++.|++|+.+
T Consensus 268 ~~~l~~~~~~~~~~~~~~~~e~~f~~~~~~d~ma~~~l~eGi~~F~~~~~~L~~~i~~~~~~ 329 (331)
T 2e1d_A 268 APALSVKAAQTSDSEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADAIKLERMLTERMFS 329 (331)
T ss_dssp CCCCCHHHHTTCSCCCCCCCHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccCcccccccccccccCChHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777776543 1122233433 55667778999999999999999999999999998743
No 5
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A
Probab=100.00 E-value=1.5e-63 Score=502.87 Aligned_cols=299 Identities=22% Similarity=0.275 Sum_probs=248.3
Q ss_pred CcHHHHHhhcCccccccccccccccHHHHHhCCCCccccChHHHHHHHhCCcchHHHHHHHHHc----CCChHHHHHHHH
Q 036665 77 TTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQS----GKDIEAAYWELV 152 (440)
Q Consensus 77 ~~l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~----g~~~~e~y~~L~ 152 (440)
|.|.+|. ++++ +|+|.. +++.+.+.+++|+|||||||.||+.. +.|+++|++++.+ |.+.+
T Consensus 23 ~~L~~L~-~~~~-~~~DT~-----dl~~i~~~~~~GvTTNPsLi~ka~~~-~~y~~~i~~~~~~~~~~~~~~~------- 87 (337)
T 3cwn_A 23 DKLTSLR-QYTT-VVADTG-----DIAAMKLYQPQDATTNPSLILNAAQI-PEYRKLIDDAVAWAKQQSNDRA------- 87 (337)
T ss_dssp BHHHHHT-TTSE-EEEECS-----CHHHHHHHCCSEEECCHHHHHHHHTS-GGGHHHHHHHHHHHHHHCSCHH-------
T ss_pred cHHHHHH-hCCE-EEccCC-----CHHHHHHhCCCCeecCHHHHHHhcCC-chHHHHHHHHHHHHHhcCCCHH-------
Confidence 6799995 6876 888765 45666678899999999999999874 8899999999864 44432
Q ss_pred HHHHHHHHHHhHHhh--hhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhh-----cCCCcEEEEcCCCcchHHHHHHH
Q 036665 153 IKDIQDACKLFESIY--DETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAPCVPSIKEV 225 (440)
Q Consensus 153 i~di~~a~d~l~p~~--~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~-----v~r~nv~IKIPaT~eGi~Ai~~L 225 (440)
+|++.+||.|.|.| +.+++++|+||+||||++++|+++||++|++|+++ |++||||||||+||+||+|+++|
T Consensus 88 -~~i~~a~D~l~v~~g~ei~~~v~G~VS~EVdprla~D~e~~i~eA~~L~~l~~~~gi~r~nv~IKIPaT~eGi~A~~~L 166 (337)
T 3cwn_A 88 -QQIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQL 166 (337)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHhcCCCCceEEEecccccCCHHHHHHHHHHHHHHhhhhCCCCCcEEEEeCCCHHHHHHHHHH
Confidence 68999999999999 45899999999999999999999999999999997 89999999999999999999999
Q ss_pred HHCCCceEEeecCCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHH
Q 036665 226 ISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAA 305 (440)
Q Consensus 226 ~~~GI~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~ 305 (440)
+++||+||+|||||+.||++|++| | ++||||||||||+|..+.. |.++. ...|..+|++++
T Consensus 167 ~~eGI~vNvTLiFS~~Qa~aaa~A--------G-------a~~iSpFVgRi~D~~~~~~---g~~~~-~~~~~~Gv~~v~ 227 (337)
T 3cwn_A 167 EKEGINCNLTLLFSFAQARACAEA--------G-------VFLISPYVGRILDWYKANT---DKKEY-APAEDPGVVSVS 227 (337)
T ss_dssp HHTTCCEEEEEECSHHHHHHHHHT--------T-------CSEEEEBSHHHHHHHHHHS---SCCCC-CGGGCHHHHHHH
T ss_pred HHCCCcEEEeeeCCHHHHHHHHHc--------C-------CcEEEeechhhhhhhhhcc---ccccc-cccCcHHHHHHH
Confidence 999999999999999999999997 7 8999999999966655443 22211 245666788889
Q ss_pred HHHHHHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHH-hCCccccccccc
Q 036665 306 LAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFV-DHGAVSRTIDLN 384 (440)
Q Consensus 306 ~~y~~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~-~~~~~~~~l~~~ 384 (440)
.+|++|++ +|+++ +||+| |+|| +.|+.+|+|||++ ||||++|++|. +|+.+.++++..
T Consensus 228 ~iy~~y~~------------~~~~T-~v~~A--S~r~-----~~~V~~LaG~d~~-Tipp~~l~~l~~~~~~v~~~l~~~ 286 (337)
T 3cwn_A 228 EIYQYYKE------------HGYET-VVMGA--SFRN-----IGEILELAGCDRL-TIAPTLLKELAESEGAIERKLSYT 286 (337)
T ss_dssp HHHHHHHH------------TTCCC-EEEEB--CCSC-----HHHHHHTTTSSEE-EECHHHHHHHHHSBSCCCCCCCCC
T ss_pred HHHHHHHH------------cCCCc-EEEeC--ccCC-----HHHHHHhhCCCEE-eCCHHHHHHHHhcCCCcccccCcc
Confidence 99999974 58875 78888 5665 5689999999999 99999999998 677776677765
Q ss_pred h-hHH-hhHHhHhH-hhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036665 385 V-SEA-EGIYSALE-KLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEK 431 (440)
Q Consensus 385 ~-~~a-~~~~~~l~-~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l~~k 431 (440)
. .++ ...+++.+ ..+++.+.++.+|++|||++|+++|++|++.|++|
T Consensus 287 ~a~~~~~~~l~e~~f~~~~~~d~ma~ell~eGi~~F~~~~~~L~~~i~~~ 336 (337)
T 3cwn_A 287 GEVKARPARITESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDL 336 (337)
T ss_dssp SCCCCCCCCCCHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCChHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4 222 12233333 45667778899999999999999999999999875
No 6
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=100.00 E-value=3.1e-64 Score=507.73 Aligned_cols=307 Identities=22% Similarity=0.242 Sum_probs=244.7
Q ss_pred CcHHHHHhhcCccccccccccccccHHHHHhCCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHHHHHH
Q 036665 77 TTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDI 156 (440)
Q Consensus 77 ~~l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di 156 (440)
+.|.+|. +. +.+|+|. .+|+.+.+.|++|+||||+||.+|+. +|.|+++|++++..|++..+.+ +..+|+
T Consensus 28 ~~Ld~Lk-~~-t~vv~Dt-----gdl~~i~~~~p~daTTNPsi~~~A~~-~~~Y~~li~~~~~~~~~~~~~~--~~~~~v 97 (345)
T 3tkf_A 28 SVLEQLK-QV-TMVVADT-----GDFELIKKYKPVDATTNPSLILKAVK-EQKYSNLVAETISKVKANNPDL--NSDDLV 97 (345)
T ss_dssp CHHHHHH-HH-SEEEEEC-----SCHHHHGGGCCSEEECCHHHHHHHHH-TCTTHHHHHHHHHHHHHHCTTC--CHHHHH
T ss_pred hHHHHhh-cC-cEEecCC-----CCHHHHHhcCCCccccCHHHHHHHhc-CHhHHHHHHHHHHHhhhccccc--chHHHH
Confidence 4556663 22 4555543 36765556799999999999999998 7999999999998776543322 245789
Q ss_pred HHHHHHhHHhh--hhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhh-----cCCCcEEEEcCCCcchHHHHHHHHHCC
Q 036665 157 QDACKLFESIY--DETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAPCVPSIKEVISQG 229 (440)
Q Consensus 157 ~~a~d~l~p~~--~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~-----v~r~nv~IKIPaT~eGi~Ai~~L~~~G 229 (440)
+.+||+|+|.| +.+++++|+||+||+|++++|+++||++|++|+++ |+++|||||||+||+||+|+++|+++|
T Consensus 98 ~~a~D~l~v~~g~ei~~~v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~eGi~A~~~L~~eG 177 (345)
T 3tkf_A 98 KEIAIEILVSFGIKILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIMIAATWEGIKAAKLLQKEG 177 (345)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhcCCCCCcEEEEeCCCHHHHHHHHHHHHCC
Confidence 99999999999 56999999999999999999999999999999997 889999999999999999999999999
Q ss_pred CceEEeecCCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHH
Q 036665 230 ISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQ 309 (440)
Q Consensus 230 I~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~ 309 (440)
|+||+|+|||+.||.+|++| | ++||||||||||+|+++.........+.+++| |..++.+|+
T Consensus 178 I~vN~TliFS~~Qa~~aAeA--------G-------a~~ISPFVGRidD~~~~~~~~~~~~~~~~~~G---v~~v~~i~~ 239 (345)
T 3tkf_A 178 INCNLTLIFDKAQAKACAEA--------G-------VYLVSPFVGRITDWQMQQNNLKTFPAIADDDG---VNSVKAIYK 239 (345)
T ss_dssp CCEEEEEECCHHHHHHHHHT--------T-------CSEEEEBSHHHHHHHHHHTTCSSCCCGGGCHH---HHHHHHHHH
T ss_pred CcEEEEEeCCHHHHHHHHHc--------C-------CcEEEeecchHHHHhhhccccccccccccCCH---HHHHHHHHH
Confidence 99999999999999999987 7 89999999999999877654211111234566 555666888
Q ss_pred HHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHh-CCccccccccchhHH
Q 036665 310 LYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVD-HGAVSRTIDLNVSEA 388 (440)
Q Consensus 310 ~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~-~~~~~~~l~~~~~~a 388 (440)
+|+ ++|+++ +||+| |+||+ .++.+|+|||++ ||||++|++|.+ |+.+.++|+...+.+
T Consensus 240 ~yk------------~~g~~T-~Vl~A--SfRn~-----~~V~aLaG~d~v-Tipp~lL~~L~~~~~~v~~~L~~~~~~~ 298 (345)
T 3tkf_A 240 LYK------------SHGFKT-IVMGA--SFRNV-----EQVIALAGCDAL-TISPVLLEELKNRDEHLEVKLTKNDDVV 298 (345)
T ss_dssp HHH------------HHTCCS-EEEEB--CCSSH-----HHHHTTTTSSEE-EECHHHHHHHHTCCSCCCCCCC------
T ss_pred HHH------------HcCCCC-EEEeC--CCCCH-----HHHHHHhCCCEE-ECCHHHHHHHHhcCCCcccccCcccccc
Confidence 886 358875 89999 68876 568899999999 999999999997 788888887765543
Q ss_pred h--hHHhHhH-hhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036665 389 E--GIYSALE-KLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKA 432 (440)
Q Consensus 389 ~--~~~~~l~-~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~ 432 (440)
. ..+++.. ..+++.+.++.+|++|||++|++++++|++.|++|+
T Consensus 299 ~~~~~~~e~~fr~~~~~d~ma~ekl~eGIr~Fa~d~~~Le~~l~~~~ 345 (345)
T 3tkf_A 299 TQSPQISEADFRWLMNENAMATHKLAEGIRLFTKDTIELENIIKQNL 345 (345)
T ss_dssp ----CCCHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCCCHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 1122222 333444568999999999999999999999999863
No 7
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1
Probab=100.00 E-value=1.5e-63 Score=500.25 Aligned_cols=310 Identities=20% Similarity=0.241 Sum_probs=254.4
Q ss_pred ccCcHHHHHhhcCccccccccccccccHHHHHhCCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCC-hHHHHHHHHH
Q 036665 75 KRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKD-IEAAYWELVI 153 (440)
Q Consensus 75 ~~~~l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~-~~e~y~~L~i 153 (440)
+-|.|.+|. .-+.+|+|.- +++.+-++|++|+||||+||.+|+. +|.|+++|++++..|++ ..+.++ +.
T Consensus 6 ~~~~L~~Lk--~~t~vv~Dtg-----d~~~i~~~~p~daTTNPsi~~~A~~-~~~Y~~li~~~~~~~~~~~~~~~~--~~ 75 (329)
T 3m16_A 6 AKNKLEALK--AMTTVVADTG-----DIEAIKQFKPVDATTNPSLILKAAK-LANYQHLIEEAIDWALQIKGNDKN--SQ 75 (329)
T ss_dssp CCCHHHHHT--TTSEEEEECS-----CHHHHHHHCCSEEECCHHHHHHHHT-CGGGHHHHHHHHHHHHHHCCC-CC--TT
T ss_pred ccCHHHHHh--cCcEEeeCCC-----CHHHHHhcCCCccCCCHHHHHHHhc-CHhHHHHHHHHHHHhhhccccchh--hH
Confidence 346788994 3478888754 4654445699999999999999998 79999999999876654 222222 24
Q ss_pred HHHHHHHHHhHHhh--hhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhh-----cCCCcEEEEcCCCcchHHHHHHHH
Q 036665 154 KDIQDACKLFESIY--DETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAPCVPSIKEVI 226 (440)
Q Consensus 154 ~di~~a~d~l~p~~--~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~-----v~r~nv~IKIPaT~eGi~Ai~~L~ 226 (440)
+|++.+||+|+|.| +.+++++|+||+||+|++++|+++||++|++|+++ |+++|||||||+||+||+|+++|+
T Consensus 76 ~~v~~a~D~l~v~~g~ei~~~v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~eGl~A~~~L~ 155 (329)
T 3m16_A 76 TTLENVGDKLAVNIGCEVLTSIPGVISTEVDARLSFDTQATVAKARKLIRLYQDAGIDSDRILIKIASTWEGIQAAKILE 155 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEEECCcccCCHHHHHHHHHHHHHhhhhhCCCCCcEEEEeCCCHHHHHHHHHHH
Confidence 78999999999999 46999999999999999999999999999999998 789999999999999999999999
Q ss_pred HCCCceEEeecCCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHH
Q 036665 227 SQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAAL 306 (440)
Q Consensus 227 ~~GI~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~ 306 (440)
++||+||+|+|||+.||.+|++| | ++||||||||||+|+++...... ....+++| |..++.
T Consensus 156 ~~GI~~N~TliFS~~Qa~aaA~A--------G-------a~~ISPFVgRidd~~~~~~~~~~-~~~~~~~G---v~~v~~ 216 (329)
T 3m16_A 156 AEGIHCNLTLLFHFAQAQACAEA--------G-------TTLISPFVGRILDWYKANSGQSE-YSASEDPG---VVSVTE 216 (329)
T ss_dssp HTTCCEEEEEECSHHHHHHHHHT--------T-------CSEEEEBHHHHHHHHHTTSSCCC-CCTTTCHH---HHHHHH
T ss_pred HCCCcEEEEEeCCHHHHHHHHHc--------C-------CcEEEeehhHHHHHhhhcccccc-cccccCcH---HHHHHH
Confidence 99999999999999999999987 7 89999999999999876543211 11223455 566677
Q ss_pred HHHHHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHh-CCccccccccch
Q 036665 307 AYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVD-HGAVSRTIDLNV 385 (440)
Q Consensus 307 ~y~~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~-~~~~~~~l~~~~ 385 (440)
+|++|+ ++|+++ +||+| |+||+ .++.+|+|||++ ||||++|++|.+ |+.+.++++...
T Consensus 217 i~~~y~------------~~g~~T-~v~~A--SfRn~-----~~V~aLaG~d~v-Tipp~~l~~l~~~~~~~~~~L~~~~ 275 (329)
T 3m16_A 217 IYNFYK------------SHGFKT-IVMGA--SFRNT-----GEIEELAGCDRL-TISPELLAQLEADTSPLEQKLFPIK 275 (329)
T ss_dssp HHHHHH------------HTTCCC-EEEEB--CCSCH-----HHHHTTTTSSEE-EECHHHHHHHHHCCSCCCCCCCCCC
T ss_pred HHHHHH------------HcCCCC-EEEeC--CCCCH-----HHHHHhhCCCEE-ECCHHHHHHHHhcCCCcccccCccc
Confidence 999887 368976 89999 78886 568899999999 999999999996 888888887765
Q ss_pred hHH--hhHHhHhH-hhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036665 386 SEA--EGIYSALE-KLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANS 434 (440)
Q Consensus 386 ~~a--~~~~~~l~-~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~~~ 434 (440)
+.+ ...+++.. ..+++++.++.+|++|||++|++++++|++.|++|+.+
T Consensus 276 ~~~~~~~~~~e~~fr~~~~~d~ma~ekl~eGIr~Fa~~~~~Le~~l~~~~~~ 327 (329)
T 3m16_A 276 ETKDTPELLTEASFRWAMNNDPMAHDKLADGIRRFAADQVTLESMLSKKISQ 327 (329)
T ss_dssp CCSCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccCCHHHHHhhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 443 22233333 44566667899999999999999999999999999853
No 8
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=100.00 E-value=2.5e-63 Score=499.51 Aligned_cols=312 Identities=22% Similarity=0.276 Sum_probs=255.9
Q ss_pred CcHHHHHhhcCccccccccccccccHHHHHhCCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHHHHHH
Q 036665 77 TTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDI 156 (440)
Q Consensus 77 ~~l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di 156 (440)
|.|.+|. .-+.+++|.- +++.+-++|++|+||||+||.+|++ +|.|+++|++++..|++....+ ....+|+
T Consensus 4 ~~L~~Lk--~~t~vv~Dtg-----d~~~i~~~~p~daTTNPsi~~~A~~-~~~Y~~li~~~~~~~~~~~~~~-~~~~~dv 74 (334)
T 3hjz_A 4 SILEQLS--SMTVVVADTG-----DLDSIKKFQPRDATTNPSLILAAAK-NPDYVKLIDKAIESSENTLPNG-FSEIELI 74 (334)
T ss_dssp CHHHHHH--TTSEEEECCC-----SHHHHHHHCCSSEEECHHHHHHHTT-STTTHHHHHHHHHHHHHHSCTT-CCHHHHH
T ss_pred cHHHHHh--hCeEEecCCC-----CHHHHHhcCCCCCCCCHHHHHHHhc-ChhHHHHHHHHHHHhhhccccH-HHHHHHH
Confidence 5788885 3478888654 5664445699999999999999986 7999999999987765322111 1246789
Q ss_pred HHHHHHhHHhhh--hcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhh-----cCCCcEEEEcCCCcchHHHHHHHHHCC
Q 036665 157 QDACKLFESIYD--ETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAPCVPSIKEVISQG 229 (440)
Q Consensus 157 ~~a~d~l~p~~~--~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~-----v~r~nv~IKIPaT~eGi~Ai~~L~~~G 229 (440)
+.|||+|+|.|+ .+++++|+||+||+|++++|+++||++|++|+++ |+++|||||||+||+||+|+++|+++|
T Consensus 75 ~~a~D~l~v~~g~ei~~~v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~eGl~A~~~L~~~G 154 (334)
T 3hjz_A 75 KETVDQVSVFFGKEILKIISGRVSTEVDARLSFDTEATVKKARKLINLYKNFGIEKERILIKIAATWEGIKAAEILEKEG 154 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhhCCCCCcEEEEeCCCHHHHHHHHHHHHCC
Confidence 999999999995 5899999999999999999999999999999998 789999999999999999999999999
Q ss_pred CceEEeecCCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHH
Q 036665 230 ISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQ 309 (440)
Q Consensus 230 I~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~ 309 (440)
|+||+|+|||+.||.+|++| | ++||||||||||+|+++...... .+..+++|+.. ++++|+
T Consensus 155 I~~N~TliFS~~Qa~~aa~A--------G-------a~~ISPFVgRi~D~~~~~~g~~~-~~~~~d~Gv~~---v~~i~~ 215 (334)
T 3hjz_A 155 IKCNLTLLFNFCQAVTCANA--------N-------ITLISPFVGRILDWHKAKTGKTS-FIGAEDPGVIS---VTQIYK 215 (334)
T ss_dssp CCEEEESCCSHHHHHHHHHT--------T-------CSEECCBHHHHHHHHHHHHCCCC-CCGGGCHHHHH---HHHHHH
T ss_pred CcEEEEEeCCHHHHHHHHHc--------C-------CcEEEeeccHHHHHhhhccCCcc-cccccCcHHHH---HHHHHH
Confidence 99999999999999999987 8 89999999999999877654322 12345677544 566888
Q ss_pred HHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHh-CCccccccccchhHH
Q 036665 310 LYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVD-HGAVSRTIDLNVSEA 388 (440)
Q Consensus 310 ~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~-~~~~~~~l~~~~~~a 388 (440)
+|+ ++|+++ +|||| ||||+. ++.+|+|||.+ |+||++|++|.+ ++.+.+.|+...+.+
T Consensus 216 ~y~------------~~g~~T-~vl~A--SfRn~~-----~v~~laG~d~~-Tipp~ll~~L~~~~~~~~~~L~~~~~~~ 274 (334)
T 3hjz_A 216 YFK------------EKGFKT-EVMGA--SFRNLD-----EIKELAGCDLL-TIAPKFLEELKREKGVLIRKLDASTKIN 274 (334)
T ss_dssp HHH------------HHTCCC-EEEEB--CCSSHH-----HHHHTTTCSEE-EECHHHHHHHHHCCSCCCCCCCCCCCCS
T ss_pred HHH------------HcCCCC-EEEEe--cCCCHH-----HHHHHhCCCEE-EcCHHHHHHHHhcCCCcccccCcccccc
Confidence 876 358875 89999 788874 67789999998 999999999987 777777887665444
Q ss_pred hhHHhHhHhhcCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 036665 389 EGIYSALEKLGIDWN----YVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKL 437 (440)
Q Consensus 389 ~~~~~~l~~~~id~~----~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~~~l~~ 437 (440)
..+...+++..|+|. .++.++++|||++|++++++|++.|++|+.++++
T Consensus 275 ~~~~~~~de~~fr~~~~~d~ma~ekl~eGIr~Fa~d~~kLe~~~~~~~~~~~~ 327 (334)
T 3hjz_A 275 NSIDYKFEEKDFRLSMLEDQMASEKLSEGITGFSKAIEELEELLIERLSEMKN 327 (334)
T ss_dssp CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCCHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 322122445555665 4688999999999999999999999999998764
No 9
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=100.00 E-value=7.2e-53 Score=405.02 Aligned_cols=223 Identities=30% Similarity=0.478 Sum_probs=178.3
Q ss_pred cHHHHHhhcCccccccccccccccHHHHHhCC-CCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHHHHHH
Q 036665 78 TLHDLYEQEGQSPWYDNLCRPVTDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDI 156 (440)
Q Consensus 78 ~l~~l~~~~gqs~W~D~i~R~~~el~~li~~G-v~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di 156 (440)
++|.-+ +.+-+|+|.. ++.+++++++.| ++|||||||||.|. +..|++.+
T Consensus 5 ~~~~~~--~~~~~flDta--~~~ei~~~~~~g~i~GvTTNPsi~~k~---g~~~~~~i---------------------- 55 (230)
T 1vpx_A 5 KIHHHH--HHMKIFLDTA--NLEEIKKGVEWGIVDGVTTNPTLISKE---GAEFKQRV---------------------- 55 (230)
T ss_dssp --------CCCEEEEECC--CHHHHHHHHHTTCCCEEECCC--------------CHH----------------------
T ss_pred cccccc--cceEEEEcCC--CHHHHHHHHhcCCcCCCccCHHHHHhc---CCCHHHHH----------------------
Confidence 445443 6788999998 488999999998 69999999999983 12233222
Q ss_pred HHHHHHhHHhhhhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCceEEee
Q 036665 157 QDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTL 236 (440)
Q Consensus 157 ~~a~d~l~p~~~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~vN~Tl 236 (440)
++.|++ ++|+||+||+ ++|+++||++|++|++++ ||||||||+||+||+|+++|+++||+||+||
T Consensus 56 ~ei~~i----------v~G~VS~EV~---a~d~e~mi~eA~~L~~~~--~nv~IKIP~T~eGl~Ai~~L~~eGI~vNvTl 120 (230)
T 1vpx_A 56 KEICDL----------VKGPVSAEVV---SLDYEGMVREARELAQIS--EYVVIKIPMTPDGIKAVKTLSAEGIKTNVTL 120 (230)
T ss_dssp HHHHHH----------HCSCEEEECS---CCSHHHHHHHHHHHHTTC--TTEEEEEESSHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhc----------cCCcEEEEEc---cCCHHHHHHHHHHHHHhC--CCEEEEeCCCHHHHHHHHHHHHCCCCEEEEE
Confidence 233554 3899999997 899999999999999996 8999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHHHHHhccC
Q 036665 237 IFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFS 316 (440)
Q Consensus 237 IFS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~~y~~~f~ 316 (440)
|||+.||.+|++| | ++|+||||||+|++ ..+|+..|++++.+|+.|
T Consensus 121 iFS~~QA~laa~A--------G-------a~~iSpFVgRidd~--------------g~dG~~~v~~i~~~~~~~----- 166 (230)
T 1vpx_A 121 VFSPAQAILAAKA--------G-------ATYVSPFVGRMDDL--------------SNDGMRMLGEIVEIYNNY----- 166 (230)
T ss_dssp ECSHHHHHHHHHH--------T-------CSEEEEBHHHHHHT--------------TSCHHHHHHHHHHHHHHH-----
T ss_pred eCCHHHHHHHHhC--------C-------CeEEEeccchhhhc--------------cccHHHHHHHHHHHHHHc-----
Confidence 9999998888776 8 89999999999996 246888898877777765
Q ss_pred CcchHHHHhcCCccceeeeeeccccCCCCCchhhhh-hhcCCCeeccCcHHHHHHHHhCCccccccccchhHHhhHHhHh
Q 036665 317 GPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVA-PLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSAL 395 (440)
Q Consensus 317 ~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~-~L~G~d~v~TiP~~~l~al~~~~~~~~~l~~~~~~a~~~~~~l 395 (440)
|++ +++||| |+|||.+ ++. +|+|||++ |+||++|++|.+||
T Consensus 167 ----------~~~-t~iL~A--S~r~~~~----v~~~~l~G~d~~-Tip~~~l~~l~~h~-------------------- 208 (230)
T 1vpx_A 167 ----------GFE-TEIIAA--SIRHPMH----VVEAALMGVDIV-TMPFAVLEKLFKHP-------------------- 208 (230)
T ss_dssp ----------TCS-CEEEEB--SCCSHHH----HHHHHHHTCSEE-EECHHHHHHHTCCH--------------------
T ss_pred ----------CCC-eEEEee--ccCCHHH----HHHHHHhCCCEE-ECCHHHHHHHHcCC--------------------
Confidence 455 489999 7999875 443 69999985 99999999999987
Q ss_pred HhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036665 396 EKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQ 429 (440)
Q Consensus 396 ~~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l~ 429 (440)
|.++||++|.++|+++++.|+
T Consensus 209 -------------lt~~gv~~F~~d~~~~l~~~~ 229 (230)
T 1vpx_A 209 -------------MTDLGIERFMEDWKKYLENLK 229 (230)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHCC-
T ss_pred -------------CHHHHHHHHHHHHHHHHHHhc
Confidence 888999999999999887654
No 10
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=100.00 E-value=6e-52 Score=397.29 Aligned_cols=216 Identities=27% Similarity=0.430 Sum_probs=172.7
Q ss_pred ccccccccccccHHHHHhCC-CCccccChHHHHHH-HhCCcchHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhHHhh
Q 036665 90 PWYDNLCRPVTDLLPLIASG-VRGVTSNPAIFQKA-ISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIY 167 (440)
Q Consensus 90 ~W~D~i~R~~~el~~li~~G-v~GvTTNPsI~~kA-i~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di~~a~d~l~p~~ 167 (440)
+|+|.. ++.+++++++.| ++|+|||||||.|+ +..+..|++ ++..+ -++++|++
T Consensus 3 ~~~Dta--d~~~i~~~~~~g~i~GvTTNPsli~ka~i~~~~~~~~---------~~~~~--------~~~~i~~~----- 58 (223)
T 1wx0_A 3 LYLDTA--SLEEIREIAAWGVLSGVTTNPTLVAKAFAAKGEALTE---------EAFAA--------HLRAICET----- 58 (223)
T ss_dssp EEEECC--CHHHHHHHHHHTCCCEEECCHHHHHHHHHHHTCCCCH---------HHHHH--------HHHHHHHH-----
T ss_pred EEEeCC--CHHHHHHHHhcCCcCceecCHHHHHhcCCchhhhhcc---------CCHHH--------HHHHHHhc-----
Confidence 688887 488999999987 79999999999998 565555642 11222 23455765
Q ss_pred hhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCceEEeecCCHHHHHHHH
Q 036665 168 DETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVI 247 (440)
Q Consensus 168 ~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~vN~TlIFS~~Qa~a~a 247 (440)
++|+||+||+ ++|+|+||++|++|++++ ||||||||+||+||+|+++|+++||+||+|||||+.||.+|+
T Consensus 59 -----v~G~VS~EV~---a~d~e~~i~eA~~l~~~~--~nv~IKIP~T~eGl~A~~~L~~~GI~vN~TliFS~~Qa~~aa 128 (223)
T 1wx0_A 59 -----VGGPVSAEVT---ALEAEAMVAEGRRLAAIH--PNIVVKLPTTEEGLKACKRLSAEGIKVNMTLIFSANQALLAA 128 (223)
T ss_dssp -----HTSCEEEECC---CSSHHHHHHHHHHHHHHC--TTEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHH
T ss_pred -----cCCcEEEEEe---cCCHHHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHH
Confidence 3899999997 999999999999999996 899999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHHHHHhccCCcchHHHHhcC
Q 036665 248 DAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKG 327 (440)
Q Consensus 248 qA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~~y~~~f~~~~w~~l~~~G 327 (440)
+| | ++|+||||||+|++ ..+|+..|++++.+|+. +|
T Consensus 129 ~A--------G-------a~~iSpFVgRidd~--------------g~~G~~~v~~i~~~~~~---------------~~ 164 (223)
T 1wx0_A 129 RA--------G-------ASYVSPFLGRVDDI--------------SWDGGELLREIVEMIQV---------------QD 164 (223)
T ss_dssp HT--------T-------CSEEEEBHHHHHHT--------------TSCHHHHHHHHHHHHHH---------------TT
T ss_pred HC--------C-------CeEEEeccchHhhc--------------CCCHHHHHHHHHHHHHH---------------cC
Confidence 65 8 89999999999997 23687777775555544 46
Q ss_pred CccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHhCCccccccccchhHHhh
Q 036665 328 AKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEG 390 (440)
Q Consensus 328 ~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~~~~~~~~l~~~~~~a~~ 390 (440)
++ +++||| |+||+.+ +..++|+|||++ |+||++|++|.+||.++.+++.|.++|+.
T Consensus 165 ~~-t~vl~A--S~r~~~~---v~~~~l~G~d~~-Tip~~~l~~l~~h~lt~~~v~~F~~D~~~ 220 (223)
T 1wx0_A 165 LP-VKVIAA--SIRHPRH---VTEAALLGADIA-TMPHAVFKQLLKHPLTDIGLKRFLEDWEK 220 (223)
T ss_dssp CS-CEEEEB--CCCSHHH---HHHHHHTTCSEE-EECHHHHHHHTCCHHHHHHC---------
T ss_pred CC-eEEeec--ccCCHHH---HHHHHHhCCCEE-ECCHHHHHHHHcCCChHHHHHHHHHHHHh
Confidence 66 489999 7999865 223379999996 99999999999999998888888887765
No 11
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=100.00 E-value=8.7e-51 Score=388.49 Aligned_cols=208 Identities=22% Similarity=0.289 Sum_probs=177.5
Q ss_pred ccccccccccccHHHHHhCC-CCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhHHhhh
Q 036665 90 PWYDNLCRPVTDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYD 168 (440)
Q Consensus 90 ~W~D~i~R~~~el~~li~~G-v~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di~~a~d~l~p~~~ 168 (440)
+|+|.. ++.+++++++.| ++|+|||||||.|+ +..|++.++ +.|++
T Consensus 3 ~~~Dta--d~~~i~~~~~~g~i~GvTTNPsii~k~---~~~~~~~i~----------------------ei~~~------ 49 (220)
T 1l6w_A 3 LYLDTS--DVVAVKALSRIFPLAGVTTNPSIIAAG---KKPLDVVLP----------------------QLHEA------ 49 (220)
T ss_dssp EEEECC--CHHHHHHHHTTSCCCEEECCHHHHHHH---CSCHHHHHH----------------------HHHHH------
T ss_pred EEecCC--CHHHHHHHHhcCCcCceeeCHHHHHhc---CCCHHHHHH----------------------HHHHh------
Confidence 688888 478999999997 79999999999994 233544432 33554
Q ss_pred hcCCCCcc--EEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCceEEeecCCHHHHHHH
Q 036665 169 ETNGGDGY--VSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEV 246 (440)
Q Consensus 169 ~~~g~~G~--VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~vN~TlIFS~~Qa~a~ 246 (440)
++|+ ||+||+ ++|+++||++|++|++++ ||||||||+||+||+|+++|+++||+||+|||||+.||.+|
T Consensus 50 ----v~G~~~VS~EV~---a~d~e~mi~eA~~l~~~~--~nv~IKIP~T~eGl~A~~~L~~~GI~vn~TliFS~~QA~~a 120 (220)
T 1l6w_A 50 ----MGGQGRLFAQVM---ATTAEGMVNDALKLRSII--ADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLS 120 (220)
T ss_dssp ----TTTCSEEEEECC---CSSHHHHHHHHHHHHHHS--TTCEEEEECSHHHHHHHHHHHHHTCCEEEEEECSHHHHHHH
T ss_pred ----cCCCceEEEEEc---cCCHHHHHHHHHHHHHhC--CCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence 3677 999997 899999999999999996 89999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHHHHHhccCCcchHHHHhc
Q 036665 247 IDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKK 326 (440)
Q Consensus 247 aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~~y~~~f~~~~w~~l~~~ 326 (440)
++| | ++|+||||||+|++ ..+|+.+|++++.+|+.|
T Consensus 121 a~A--------G-------a~~iSpfvgRidd~--------------g~~G~~~i~~~~~~y~~~--------------- 156 (220)
T 1l6w_A 121 ALA--------G-------AEYVAPYVNRIDAQ--------------GGSGIQTVTDLHQLLKMH--------------- 156 (220)
T ss_dssp HHH--------T-------CSEEEEBHHHHHHT--------------TSCHHHHHHHHHHHHHHH---------------
T ss_pred HHC--------C-------CeEEEeccchhhcc--------------cccHHHHHHHHHHHHHhc---------------
Confidence 776 8 89999999999997 246899999988777765
Q ss_pred CCccceeeeeeccccCCCCCchhhhh-hhcCCCeeccCcHHHHHHHHhCCccccccccchhHHhhH
Q 036665 327 GAKKQRLLWASTSVKNPAYPDTLYVA-PLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGI 391 (440)
Q Consensus 327 G~~~qrlL~ASTsvKn~~~~~~~~v~-~L~G~d~v~TiP~~~l~al~~~~~~~~~l~~~~~~a~~~ 391 (440)
|++ +++||| |+||+.| |+. +|+|||++ |+||++|++|.+||.+..+++.|.++|+..
T Consensus 157 ~~~-t~il~A--S~r~~~~----v~~~~l~G~d~~-Tip~~~l~~l~~h~lt~~~v~~F~~D~~~~ 214 (220)
T 1l6w_A 157 APQ-AKVLAA--SFKTPRQ----ALDCLLAGCESI-TLPLDVAQQMISYPAVDAAVAKFEQDWQGA 214 (220)
T ss_dssp CTT-CEEEEB--CCSSHHH----HHHHHHTTCSEE-EECHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC-eEEeec--ccCCHHH----HHHHHHhCCCeE-ECCHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 555 489999 7999865 444 69999995 999999999999999988888888877764
No 12
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=100.00 E-value=3.9e-50 Score=381.62 Aligned_cols=208 Identities=25% Similarity=0.413 Sum_probs=176.2
Q ss_pred ccccccccccccHHHHHhCC-CCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhHHhhh
Q 036665 90 PWYDNLCRPVTDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYD 168 (440)
Q Consensus 90 ~W~D~i~R~~~el~~li~~G-v~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di~~a~d~l~p~~~ 168 (440)
+|+|.. ++.+++++.+.| ++||||||||+.|+ .|+++.+. +++.|++
T Consensus 3 ~flDtA--n~~ei~~~~~~g~i~GVTTNPsli~k~----------------~g~~~~~~--------~~eI~~~------ 50 (212)
T 3r8r_A 3 FFVDTA--NIDEIREANELGILAGVTTNPSLVAKE----------------ANVSFHDR--------LREITDV------ 50 (212)
T ss_dssp EEEECC--CHHHHHHHHHTTCEEEEECCHHHHHTS----------------CSSCHHHH--------HHHHHHH------
T ss_pred EEEecC--CHHHHHHHHhcCCcccccCCHHHHHHc----------------cCCCHHHH--------HHHHHHh------
Confidence 577877 478999999999 69999999999983 15554442 3334554
Q ss_pred hcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCceEEeecCCHHHHHHHHH
Q 036665 169 ETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVID 248 (440)
Q Consensus 169 ~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~vN~TlIFS~~Qa~a~aq 248 (440)
++|+||+|| +++|+++|+++|++|+++ .||++||||+||+|++|+++|+++||+||+|+|||+.||.+|++
T Consensus 51 ----v~G~Vs~EV---~a~d~e~mi~ea~~l~~~--~~nv~IKIP~T~eGl~A~~~L~~~GI~vn~TlifS~~Qa~~Aa~ 121 (212)
T 3r8r_A 51 ----VKGSVSAEV---ISLKAEEMIEEGKELAKI--APNITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALLAAR 121 (212)
T ss_dssp ----CCSCEEEEC---CCSSHHHHHHHHHHHHTT--CTTEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHH
T ss_pred ----cCCCEEEEE---ecCCHHHHHHHHHHHHHh--CCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHH
Confidence 489999999 899999999999999998 49999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHHHHHhccCCcchHHHHhcCC
Q 036665 249 AYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGA 328 (440)
Q Consensus 249 A~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~~y~~~f~~~~w~~l~~~G~ 328 (440)
| | +.|+||||||+|++ .++|...|.++..+|+. +|+
T Consensus 122 A--------G-------a~yISPfvgRi~d~--------------~~dG~~~v~~i~~~~~~---------------~~~ 157 (212)
T 3r8r_A 122 A--------G-------ATYVSPFLGRLDDI--------------GHNGLDLISEVKQIFDI---------------HGL 157 (212)
T ss_dssp H--------T-------CSEEEEBHHHHHHT--------------TSCHHHHHHHHHHHHHH---------------HTC
T ss_pred c--------C-------CeEEEeccchhhhc--------------CCChHHHHHHHHHHHHH---------------cCC
Confidence 7 8 89999999999997 35787777775555444 478
Q ss_pred ccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHhCCccccccccchhHHh
Q 036665 329 KKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAE 389 (440)
Q Consensus 329 ~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~~~~~~~~l~~~~~~a~ 389 (440)
++ +|||| |+||+.+ ...++++|||.+ |+||+++++|.+||.++..++.|.++|+
T Consensus 158 ~t-~ilaA--S~R~~~~---v~~~a~~G~d~~-Tip~~vl~~l~~hpltd~~~~~F~~Dw~ 211 (212)
T 3r8r_A 158 DT-QIIAA--SIRHPQH---VTEAALRGAHIG-TMPLKVIHALTKHPLTDKGIEQFLADWN 211 (212)
T ss_dssp CC-EEEEB--SCCSHHH---HHHHHHTTCSEE-EECHHHHHHHTCCHHHHHHHHHHHHHHC
T ss_pred CC-EEEEe--cCCCHHH---HHHHHHcCCCEE-EcCHHHHHHHHcCCcHHHHHHHHHHHhh
Confidence 75 89999 7999864 344569999998 9999999999999999888888877764
No 13
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=100.00 E-value=1.5e-49 Score=380.08 Aligned_cols=212 Identities=28% Similarity=0.419 Sum_probs=179.1
Q ss_pred ccccccccccccHHHHHhCC-CCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhHHhhh
Q 036665 90 PWYDNLCRPVTDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYD 168 (440)
Q Consensus 90 ~W~D~i~R~~~el~~li~~G-v~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di~~a~d~l~p~~~ 168 (440)
+|+|.. ++.+++++.+.| ++||||||||+.|++. .|+++.+. +++.|++
T Consensus 3 ~flDtA--n~~ei~~~~~~g~i~GVTTNPsli~k~~~--------------~g~~~~~~--------~~ei~~~------ 52 (223)
T 3s1x_A 3 IFLDTA--NIDEIRTGVNWGIVDGVTTNPTLISKEAV--------------NGKKYGDI--------IREILKI------ 52 (223)
T ss_dssp EEEECC--CHHHHHHHHHHTCCCEEECCHHHHHHHSC--------------TTCCHHHH--------HHHHHHH------
T ss_pred EEEecC--CHHHHHHHHhcCCcccccCCHHHHHhhhc--------------cCCCHHHH--------HHHHHHh------
Confidence 678877 478999999999 7999999999999643 15555543 2334554
Q ss_pred hcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCceEEeecCCHHHHHHHHH
Q 036665 169 ETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVID 248 (440)
Q Consensus 169 ~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~vN~TlIFS~~Qa~a~aq 248 (440)
++|+||+||+ ++|+++|+++|++|+++. ||++||||+||+|++|+++|+++||+||+|+|||+.||.+|++
T Consensus 53 ----v~G~Vs~EV~---a~d~e~mi~eA~~L~~~~--~nv~IKIP~T~eGl~A~~~L~~~GI~vn~TlifS~~QA~~Aa~ 123 (223)
T 3s1x_A 53 ----VDGPVSVEVV---STKYEGMVEEARKIHGLG--DNAVVKIPMTEDGLRAIKTLSSEHINTNCTLVFNPIQALLAAK 123 (223)
T ss_dssp ----CSSCEEEECC---CCSHHHHHHHHHHHHHTC--TTEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHH
T ss_pred ----CCCCEEEEEc---cCCHHHHHHHHHHHHHhC--CCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHH
Confidence 4899999996 699999999999999984 8999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHHHHHhccCCcchHHHHhcCC
Q 036665 249 AYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGA 328 (440)
Q Consensus 249 A~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~~y~~~f~~~~w~~l~~~G~ 328 (440)
| | +.|+||||||+|++ ..+|...|.+ +|++|+ .+|+
T Consensus 124 A--------G-------a~yISPfvgRi~d~--------------g~dG~~~v~~---i~~~~~------------~~~~ 159 (223)
T 3s1x_A 124 A--------G-------VTYVSPFVGRLDDI--------------GEDGMQIIDM---IRTIFN------------NYII 159 (223)
T ss_dssp T--------T-------CSEEEEBSHHHHHT--------------TSCTHHHHHH---HHHHHH------------HTTC
T ss_pred c--------C-------CeEEEeecchHhhc--------------CCCHHHHHHH---HHHHHH------------HcCC
Confidence 6 8 89999999999997 3467777766 555554 2578
Q ss_pred ccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHhCCccccccccchhHHhhH
Q 036665 329 KKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGI 391 (440)
Q Consensus 329 ~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~~~~~~~~l~~~~~~a~~~ 391 (440)
++ +|||| |+||+.+ ...++++|||.+ |+||+++++|..||.++..++.|.++|+..
T Consensus 160 ~T-~IlaA--S~Rn~~~---v~~aa~~G~d~~-Tip~~vl~~l~~hpltd~~~~~F~~Dw~~~ 215 (223)
T 3s1x_A 160 KT-QILVA--SIRNPIH---VLRSAVIGADVV-TVPFNVLKSLMKHPKTDEGLAKFLEDWKKV 215 (223)
T ss_dssp CS-EEEEB--SCCSHHH---HHHHHHHTCSEE-EECHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CC-EEEEE--eCCCHHH---HHHHHHcCCCEE-EeCHHHHHHHHcCCcHHHHHHHHHHHHHHh
Confidence 75 89999 7999864 344469999998 999999999999999998888888888764
No 14
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=62.88 E-value=23 Score=33.31 Aligned_cols=71 Identities=18% Similarity=0.189 Sum_probs=55.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcEEEEcCC-CcchHHHHHHHHHC--CCceEEeecCCHHHHHHHHHHHHHHHHHcCCCCC
Q 036665 186 ADDTQGTVEAAKWLHKVVNRPNVYIKIPA-TAPCVPSIKEVISQ--GISVNVTLIFSLARYEEVIDAYLDGLEASGLSDL 262 (440)
Q Consensus 186 a~D~e~~v~eA~~L~~~v~r~nv~IKIPa-T~eGi~Ai~~L~~~--GI~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~ 262 (440)
..|.+..+.-++.|++. | =-+|-|+. |+.++++|+.|.++ +.-|=+-.|.+.+|+.++.+| |
T Consensus 21 ~~~~~~a~~~a~al~~g-G--i~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~A--------G---- 85 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAG-G--VHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDA--------G---- 85 (217)
T ss_dssp CSCGGGHHHHHHHHHHT-T--CCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHH--------T----
T ss_pred cCCHHHHHHHHHHHHHc-C--CCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHc--------C----
Confidence 68999999999999985 1 22566664 56899999999874 677777889999999988887 6
Q ss_pred CccceEEeech
Q 036665 263 SRVTSVASFFV 273 (440)
Q Consensus 263 ~~vasviSpfV 273 (440)
...++||-.
T Consensus 86 --A~fivsP~~ 94 (217)
T 3lab_A 86 --AQFIVSPGL 94 (217)
T ss_dssp --CSEEEESSC
T ss_pred --CCEEEeCCC
Confidence 356788864
No 15
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=52.35 E-value=46 Score=31.37 Aligned_cols=70 Identities=17% Similarity=0.114 Sum_probs=53.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcEEEEcCC-CcchHHHHHHHHHC--CCceEEeecCCHHHHHHHHHHHHHHHHHcCCCCC
Q 036665 186 ADDTQGTVEAAKWLHKVVNRPNVYIKIPA-TAPCVPSIKEVISQ--GISVNVTLIFSLARYEEVIDAYLDGLEASGLSDL 262 (440)
Q Consensus 186 a~D~e~~v~eA~~L~~~v~r~nv~IKIPa-T~eGi~Ai~~L~~~--GI~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~ 262 (440)
..|.+..++-++.+.+. | =-+|-|+. |+.++++|+++.++ ++-+-+-.|++.+|+..+.+| |
T Consensus 42 ~~~~~~a~~~a~al~~g-G--i~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~A--------G---- 106 (232)
T 4e38_A 42 IDNAEDIIPLGKVLAEN-G--LPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEA--------G---- 106 (232)
T ss_dssp CSSGGGHHHHHHHHHHT-T--CCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHH--------T----
T ss_pred cCCHHHHHHHHHHHHHC-C--CCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHc--------C----
Confidence 68899999999999985 2 22555554 56789999999874 677777779999999888877 6
Q ss_pred CccceEEeec
Q 036665 263 SRVTSVASFF 272 (440)
Q Consensus 263 ~~vasviSpf 272 (440)
...++||-
T Consensus 107 --A~fIvsP~ 114 (232)
T 4e38_A 107 --ATFVVSPG 114 (232)
T ss_dssp --CSEEECSS
T ss_pred --CCEEEeCC
Confidence 35677875
No 16
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=50.36 E-value=44 Score=32.37 Aligned_cols=72 Identities=10% Similarity=0.136 Sum_probs=51.8
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCC----------cchHHHHHHHHHCCCceEEeecCCHHHHHHH
Q 036665 177 VSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPAT----------APCVPSIKEVISQGISVNVTLIFSLARYEEV 246 (440)
Q Consensus 177 VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT----------~eGi~Ai~~L~~~GI~vN~TlIFS~~Qa~a~ 246 (440)
+.+=-|-.-+++.++-|.-|+--.++....| +||+-.- .+-++|+++|.++|+.|-....=++..+..+
T Consensus 74 ~~~lpNTag~~ta~eAv~~a~lare~~~~~~-~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl 152 (265)
T 1wv2_A 74 YTILPNTAGCYDAVEAVRTCRLARELLDGHN-LVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQL 152 (265)
T ss_dssp SEEEEECTTCCSHHHHHHHHHHHHTTTTSCC-EEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHH
T ss_pred CEECCcCCCCCCHHHHHHHHHHHHHHcCCCC-eEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 3333344458999999999876666244445 8898555 4789999999999999987777788766555
Q ss_pred HHH
Q 036665 247 IDA 249 (440)
Q Consensus 247 aqA 249 (440)
.++
T Consensus 153 ~~~ 155 (265)
T 1wv2_A 153 AEI 155 (265)
T ss_dssp HHS
T ss_pred HHh
Confidence 443
No 17
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=41.13 E-value=49 Score=33.63 Aligned_cols=60 Identities=17% Similarity=0.300 Sum_probs=38.2
Q ss_pred ccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCC--------------CcchHHHHHHHHHCCCc-eEEeecCC
Q 036665 175 GYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPA--------------TAPCVPSIKEVISQGIS-VNVTLIFS 239 (440)
Q Consensus 175 G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPa--------------T~eGi~Ai~~L~~~GI~-vN~TlIFS 239 (440)
-.|++|++|..-+ ++.++.-+ +. |-.+|-|-|=+ ..+-++|++.+.+.||. ||+.+||.
T Consensus 140 ~eitie~~p~~l~--~e~l~~L~---~~-G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~G 213 (457)
T 1olt_A 140 AEISIEVDPREIE--LDVLDHLR---AE-GFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYG 213 (457)
T ss_dssp EEEEEEECSSSCC--THHHHHHH---HT-TCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEES
T ss_pred cEEEEEEccCcCC--HHHHHHHH---Hc-CCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 4799999997542 23333322 21 22344444422 23567899999999997 99999986
Q ss_pred H
Q 036665 240 L 240 (440)
Q Consensus 240 ~ 240 (440)
+
T Consensus 214 l 214 (457)
T 1olt_A 214 L 214 (457)
T ss_dssp C
T ss_pred C
Confidence 4
No 18
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=37.81 E-value=2.8e+02 Score=26.66 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=62.3
Q ss_pred CccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCc-----c-h--------HHHHHHHHHCCCceEEeecCC
Q 036665 174 DGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATA-----P-C--------VPSIKEVISQGISVNVTLIFS 239 (440)
Q Consensus 174 ~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~-----e-G--------i~Ai~~L~~~GI~vN~TlIFS 239 (440)
.-++-+|..| +++|++-|.++ +|.-+-=||-.+ + | -++++.|...||+|-+=.==.
T Consensus 65 ~~~lNlE~a~-----t~emi~ial~~-----kP~~vtLVPEkreE~TTegGldv~~~~L~~~i~~L~~~GIrVSLFIDpd 134 (260)
T 3o6c_A 65 KSPVNLECAL-----NDEILNLALKL-----KPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFINPS 134 (260)
T ss_dssp SSCEEEEECS-----CHHHHHHHHHH-----CCSEEEECCCSGGGBCTTSSBCTTCTTHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCCEEeecCC-----CHHHHHHHHHc-----CCCEEEECCCCCCccCCCCChhhCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4688999965 78999999886 577666788654 2 4 578999999999998888778
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHH
Q 036665 240 LARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTL 279 (440)
Q Consensus 240 ~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~ 279 (440)
++|..++.+ .| +.+|=.+-|..-+.
T Consensus 135 ~~qi~aA~~--------~G-------Ad~IELhTG~YA~a 159 (260)
T 3o6c_A 135 LEDIEKSKI--------LK-------AQFIELHTGHYANL 159 (260)
T ss_dssp HHHHHHHHH--------TT-------CSEEEECCHHHHHH
T ss_pred HHHHHHHHH--------hC-------CCEEEEechHhhhh
Confidence 888655544 48 78889998887543
No 19
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=33.37 E-value=1.2e+02 Score=29.41 Aligned_cols=75 Identities=21% Similarity=0.247 Sum_probs=53.2
Q ss_pred CCCccEEEEecCCCCCCHHHHHHHHHHHHhh---cCCCcEEEEc-----CCCc----------chHHHHHHHHH-CCCce
Q 036665 172 GGDGYVSVEVSPRLADDTQGTVEAAKWLHKV---VNRPNVYIKI-----PATA----------PCVPSIKEVIS-QGISV 232 (440)
Q Consensus 172 g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~---v~r~nv~IKI-----PaT~----------eGi~Ai~~L~~-~GI~v 232 (440)
|.+.++.+=+-|...+|.+.+++.|++|.+. ++. .++.|. |-|. +||+.+++... .||++
T Consensus 13 G~~~~~~vIaGPCsie~~~~~~e~A~~lk~~~~~~~~-~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp~ 91 (288)
T 3tml_A 13 GLDQPFFLIAGTCVVESEQMTIDTAGRLKEICEKLNV-PFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLPV 91 (288)
T ss_dssp STTSCCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTC-CEEEECBC--------------CHHHHHHHHHHHHHHHCCCE
T ss_pred CCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcCC-CEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeE
Confidence 3444677888898899999999999999874 332 355675 6554 56777777664 59999
Q ss_pred EEeecCCHHHHHHHHH
Q 036665 233 NVTLIFSLARYEEVID 248 (440)
Q Consensus 233 N~TlIFS~~Qa~a~aq 248 (440)
+|-+|++.+...+.+
T Consensus 92 -~tev~d~~~v~~l~~ 106 (288)
T 3tml_A 92 -LTDVHSIDEIEQVAS 106 (288)
T ss_dssp -EEECCSGGGHHHHHH
T ss_pred -EEEeCCHHHHHHHHH
Confidence 688999998765544
No 20
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=33.32 E-value=1.4e+02 Score=30.57 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=54.5
Q ss_pred CCCccEEEEecCCC-CCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHH----HHHCC--CceEEeecCCHHHHH
Q 036665 172 GGDGYVSVEVSPRL-ADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKE----VISQG--ISVNVTLIFSLARYE 244 (440)
Q Consensus 172 g~~G~VS~EVdP~l-a~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~----L~~~G--I~vN~TlIFS~~Qa~ 244 (440)
|.+-+|++|---.. -.|++++++|-++|.+. |.+=|=|-|| +.+-.+|+.+ |.+.| |++=+..=|...-+.
T Consensus 19 GG~~PI~VQSMtnT~T~Dv~aTv~QI~~L~~a-G~eiVRvaVp-~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al 96 (406)
T 4g9p_A 19 GGAHPIAVQSMTNTPTRDVEATTAQVLELHRA-GSEIVRLTVN-DEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLL 96 (406)
T ss_dssp STTSCCEEEEECCSCTTCHHHHHHHHHHHHHH-TCSEEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHH
T ss_pred CCCCceeeeecCCCCcccHHHHHHHHHHHHHc-CCCEEEEecC-CHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHH
Confidence 44568888863222 46999999999999986 5677888888 4444445443 44444 677788889887766
Q ss_pred HHHHHHHHHH
Q 036665 245 EVIDAYLDGL 254 (440)
Q Consensus 245 a~aqA~lagl 254 (440)
.++++..+|+
T Consensus 97 ~a~~~~a~~~ 106 (406)
T 4g9p_A 97 RKYPKMAEAL 106 (406)
T ss_dssp HHCHHHHHHC
T ss_pred HHHHHHHhHH
Confidence 5444433343
No 21
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=31.63 E-value=36 Score=31.69 Aligned_cols=46 Identities=22% Similarity=0.154 Sum_probs=0.0
Q ss_pred HHHHHhhcCccccccccccccccHHHHHhCCCCccccC-hHHHHHHHh
Q 036665 79 LHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSN-PAIFQKAIS 125 (440)
Q Consensus 79 l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTN-PsI~~kAi~ 125 (440)
+-+...+.|-.+|.=.+. +..+++++++.|++|++|| |..+.+.+.
T Consensus 202 ~v~~~~~~G~~v~~WTvn-~~~~~~~l~~~GVdgIiTD~P~~~~~~l~ 248 (252)
T 3qvq_A 202 QVSDIKAAGYKVLAFTIN-DESLALKLYNQGLDAVFSDYPQKIQSAID 248 (252)
T ss_dssp HHHHHHHTTCEEEEECCC-CHHHHHHHHHTTCCEEEESSHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEcCC-CHHHHHHHHHcCCCEEEeCCHHHHHHHHH
No 22
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=30.32 E-value=3.9e+02 Score=25.97 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=61.3
Q ss_pred CccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCc------ch----------HHHHHHHHHCCCceEEeec
Q 036665 174 DGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATA------PC----------VPSIKEVISQGISVNVTLI 237 (440)
Q Consensus 174 ~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~------eG----------i~Ai~~L~~~GI~vN~TlI 237 (440)
.-++-+|..| +++|++-|.++ +|..+-=||-.+ -| -+++++|...||+|-+=.=
T Consensus 94 ~t~lNlEma~-----t~emi~ial~~-----kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFID 163 (278)
T 3gk0_A 94 KTRMNLECAV-----TPEMLDIACEI-----RPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFID 163 (278)
T ss_dssp SSCEEEEECS-----SHHHHHHHHHH-----CCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEeecCC-----CHHHHHHHHHc-----CCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4688899965 78999999886 577777788654 23 2478999999999988887
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhH
Q 036665 238 FSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDT 278 (440)
Q Consensus 238 FS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~ 278 (440)
=.++|..++.+. | +.+|=.+-|..-+
T Consensus 164 pd~~qI~aA~~~--------G-------Ad~IELhTG~YA~ 189 (278)
T 3gk0_A 164 PDEAQIRAAHET--------G-------APVIELHTGRYAD 189 (278)
T ss_dssp SCHHHHHHHHHH--------T-------CSEEEECCHHHHT
T ss_pred CCHHHHHHHHHh--------C-------cCEEEEecchhhc
Confidence 788887665554 8 7788888887733
No 23
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=29.58 E-value=1.6e+02 Score=28.77 Aligned_cols=72 Identities=14% Similarity=0.177 Sum_probs=53.3
Q ss_pred CCCccEEEEecCCCCCCHHHHHHHHHHHHhh---cCCCcEEEEc-----CCCc----------chHHHHHHHHH-CCCce
Q 036665 172 GGDGYVSVEVSPRLADDTQGTVEAAKWLHKV---VNRPNVYIKI-----PATA----------PCVPSIKEVIS-QGISV 232 (440)
Q Consensus 172 g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~---v~r~nv~IKI-----PaT~----------eGi~Ai~~L~~-~GI~v 232 (440)
|.+.++.+=+-|...+|.+.+++-|++|.+. ++ =.++.|. |=|. +||+.+++... .||++
T Consensus 37 G~~~~l~vIaGPCsies~e~~~~~A~~lk~~~~~~~-~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLpv 115 (298)
T 3fs2_A 37 SNSAPLALIAGPCQMETRDHAFEMAGRLKEMTDKLG-IGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFPV 115 (298)
T ss_dssp CTTSCCEEEEECSBCCCHHHHHHHHHHHHHHHHHHT-CCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHCCCE
T ss_pred CCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcC-CcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeE
Confidence 4455788888999999999999999999874 22 2467776 5443 57777777664 59999
Q ss_pred EEeecCCHHHHHH
Q 036665 233 NVTLIFSLARYEE 245 (440)
Q Consensus 233 N~TlIFS~~Qa~a 245 (440)
+|-+|++.+...
T Consensus 116 -~Tev~D~~~v~~ 127 (298)
T 3fs2_A 116 -LTDIHTEEQCAA 127 (298)
T ss_dssp -EEECCSHHHHHH
T ss_pred -EEEeCCHHHHHH
Confidence 788999998643
No 24
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=28.76 E-value=1.2e+02 Score=29.32 Aligned_cols=64 Identities=13% Similarity=0.122 Sum_probs=44.2
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCcEEEE----------cCCCcchHHHHHHHHHCCCceEEeecCCHHHHHHHHHH
Q 036665 184 RLADDTQGTVEAAKWLHKVVNRPNVYIK----------IPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDA 249 (440)
Q Consensus 184 ~la~D~e~~v~eA~~L~~~v~r~nv~IK----------IPaT~eGi~Ai~~L~~~GI~vN~TlIFS~~Qa~a~aqA 249 (440)
.=+++.|+.+..++--.+.++ .+ +|| .|--.+-++|+++|.++|+.|.-...-++..+..+.++
T Consensus 71 aG~~taeeAv~~a~lare~~g-t~-~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~ 144 (268)
T 2htm_A 71 AGARTAEEAVRLARLGRLLTG-ER-WVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLAAL 144 (268)
T ss_dssp TTCCSHHHHHHHHHHHHHHHC-CS-EEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhhHhcC-cc-eeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhc
Confidence 346888888888765444444 23 677 56666899999999999988763335677665555443
No 25
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=27.21 E-value=2.1e+02 Score=28.57 Aligned_cols=70 Identities=6% Similarity=0.050 Sum_probs=47.4
Q ss_pred CccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCC-----------CcchH-HHHHHHHHC-CCceEEeec---
Q 036665 174 DGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPA-----------TAPCV-PSIKEVISQ-GISVNVTLI--- 237 (440)
Q Consensus 174 ~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPa-----------T~eGi-~Ai~~L~~~-GI~vN~TlI--- 237 (440)
++++-.-+.+. .. ++++++..+.++-+-+.|-|.. ...++ +.++.+.+. +++|-+-.|
T Consensus 144 ~~~~ianig~~--~~----~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g 217 (365)
T 3sr7_A 144 HLLLATNIGLD--KP----YQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFG 217 (365)
T ss_dssp -CCEEEEEETT--SC----HHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSC
T ss_pred CCcEEEEeCCC--CC----HHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCC
Confidence 56666666542 22 3577777777777778888764 12233 678888764 899999988
Q ss_pred CCHHHHHHHHHH
Q 036665 238 FSLARYEEVIDA 249 (440)
Q Consensus 238 FS~~Qa~a~aqA 249 (440)
.+++.+..+.++
T Consensus 218 ~s~e~A~~l~~a 229 (365)
T 3sr7_A 218 MDVKTIQTAIDL 229 (365)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHc
Confidence 899887776665
No 26
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=27.18 E-value=2.7e+02 Score=28.09 Aligned_cols=75 Identities=20% Similarity=0.303 Sum_probs=54.2
Q ss_pred CCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcC--CCc--EEEEc----CCC-------------------cchHHHHH
Q 036665 171 NGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVN--RPN--VYIKI----PAT-------------------APCVPSIK 223 (440)
Q Consensus 171 ~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~--r~n--v~IKI----PaT-------------------~eGi~Ai~ 223 (440)
.|.++++-+=+-|.-.+|.+..++-|++|.+... +++ ++.|+ |=| .+||+.++
T Consensus 63 ~g~d~rllvIaGPCSIed~e~aleyA~~Lk~~~~~~~d~l~iVmR~yfeKPRTs~GwKGli~dP~ld~Sf~g~~GL~i~r 142 (370)
T 1of8_A 63 TGKDDRVLVIVGPCSIHDLEAAQEYALRLKKLSDELKGDLSIIMRAYLEKPRTTVGWKGLINDPDVNNTFNINKGLQSAR 142 (370)
T ss_dssp TTSCCSEEEEEECSCCCCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCCSSSSCCCTTTCTTSSSCCCHHHHHHHHH
T ss_pred cCCCCCeEEEEeCCcCCCHHHHHHHHHHHHHHHHhhccCeEEEEEeccccccCCccccccccCCCcCCCcCHHHHHHHHH
Confidence 3567899999999999999999999999988621 112 23332 222 37899877
Q ss_pred HHH----HCCCceEEeecCCHHHHHHH
Q 036665 224 EVI----SQGISVNVTLIFSLARYEEV 246 (440)
Q Consensus 224 ~L~----~~GI~vN~TlIFS~~Qa~a~ 246 (440)
+|. +.|++| +|=+..+.|..-+
T Consensus 143 ~ll~~v~e~GlPv-aTEvld~~~~qyv 168 (370)
T 1of8_A 143 QLFVNLTNIGLPI-GSEMLDTISPQYL 168 (370)
T ss_dssp HHHHHHHTTTCCE-EEECCSSSTHHHH
T ss_pred HHHHHHHHcCCce-EEeecCcccHHHH
Confidence 765 469999 8888877775433
No 27
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=25.87 E-value=2.2e+02 Score=26.99 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=49.3
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEc---CCC---------cchHHHHHHHHH-CCCceEEeecCCHHHH
Q 036665 177 VSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKI---PAT---------APCVPSIKEVIS-QGISVNVTLIFSLARY 243 (440)
Q Consensus 177 VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKI---PaT---------~eGi~Ai~~L~~-~GI~vN~TlIFS~~Qa 243 (440)
+.+=..|...+|.+..++.++++.+. + -.++-+- |-| ++|++.++++.+ .||++ +|-+|+..++
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~-G-a~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~-~te~~d~~~~ 100 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEV-G-IKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVT-VTEVMDTRHV 100 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHT-T-CCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEE-EEECCCGGGH
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHc-C-CCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcE-EEeeCCHHhH
Confidence 55556788889999999999999885 2 2222221 222 788988888775 59999 7788888886
Q ss_pred HHHHH
Q 036665 244 EEVID 248 (440)
Q Consensus 244 ~a~aq 248 (440)
..+.+
T Consensus 101 ~~l~~ 105 (262)
T 1zco_A 101 ELVAK 105 (262)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 65544
No 28
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=23.79 E-value=1.3e+02 Score=28.83 Aligned_cols=69 Identities=14% Similarity=0.151 Sum_probs=50.7
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHhh---c-CCCcEEEEc-----CCC----------cchHHHHHHH-HHCCCceEEe
Q 036665 176 YVSVEVSPRLADDTQGTVEAAKWLHKV---V-NRPNVYIKI-----PAT----------APCVPSIKEV-ISQGISVNVT 235 (440)
Q Consensus 176 ~VS~EVdP~la~D~e~~v~eA~~L~~~---v-~r~nv~IKI-----PaT----------~eGi~Ai~~L-~~~GI~vN~T 235 (440)
++.+=+-|.-.+|.+.+++-|++|.+. + +. .++.|. |=| .+|++..+++ .+.|+++ +|
T Consensus 3 ~l~viaGPCsie~~~~~~~~A~~l~~~~~~~~~~-~~v~k~~f~KapRTs~~sf~G~g~~~GL~~l~~~~~e~Glp~-~t 80 (267)
T 2nwr_A 3 KFLVIAGPNAIESEELLLKVGEEIKRLSEKFKEV-EFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKEEFGLKI-TT 80 (267)
T ss_dssp CEEEEEECSBCSCHHHHHHHHHHHHHHHHHCTTE-EEEEECBSCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEE-EE
T ss_pred CcEEEEcCCCcCCHHHHHHHHHHHHHHHHhhcCc-cEEEeeccccCCCCCCCCCcCccHHHHHHHHHHHHHhcCCeE-EE
Confidence 455667888899999999999999886 2 21 234563 544 2677788777 4569999 88
Q ss_pred ecCCHHHHHHH
Q 036665 236 LIFSLARYEEV 246 (440)
Q Consensus 236 lIFS~~Qa~a~ 246 (440)
-+|++.+...+
T Consensus 81 e~~d~~~~~~l 91 (267)
T 2nwr_A 81 DIHESWQAEPV 91 (267)
T ss_dssp ECSSGGGHHHH
T ss_pred ecCCHHhHHHH
Confidence 89999986544
No 29
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=23.74 E-value=45 Score=30.79 Aligned_cols=45 Identities=20% Similarity=0.138 Sum_probs=0.0
Q ss_pred HHHHHhhcCccccccccccccccHHHHHhCCCCccccC-hHHHHHHHh
Q 036665 79 LHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSN-PAIFQKAIS 125 (440)
Q Consensus 79 l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTN-PsI~~kAi~ 125 (440)
+.+++ +.|-.++.=-+. +..+++++++.|++|++|| |..+.+.+.
T Consensus 189 v~~~~-~~G~~v~~WTVn-~~~~~~~l~~~GVdgIiTD~P~~~~~~l~ 234 (238)
T 3no3_A 189 VKDCK-VLGMTSNVWTVD-DPKLMEEMIDMGVDFITTDLPEETQKILH 234 (238)
T ss_dssp HHHHH-HTTCEEEEECCC-SHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred HHHHH-HCCCEEEEECCC-CHHHHHHHHHcCCCEEECCCHHHHHHHHH
No 30
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=22.77 E-value=1.5e+02 Score=28.81 Aligned_cols=72 Identities=13% Similarity=0.044 Sum_probs=53.4
Q ss_pred CCccEEEEecCCCCCCHHHHHHHHHHHHhh---cCCCcEEEEc-----CCCc----------chHHHHHHHHH-CCCceE
Q 036665 173 GDGYVSVEVSPRLADDTQGTVEAAKWLHKV---VNRPNVYIKI-----PATA----------PCVPSIKEVIS-QGISVN 233 (440)
Q Consensus 173 ~~G~VS~EVdP~la~D~e~~v~eA~~L~~~---v~r~nv~IKI-----PaT~----------eGi~Ai~~L~~-~GI~vN 233 (440)
.+.++.+=+-|...+|.+.+++-|++|.+. ++ =.++.|. |=|. +||+.+++... .||++
T Consensus 17 ~~~~~~viaGPCsie~~e~~~~~A~~lk~~~~~~~-~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~Glp~- 94 (285)
T 3sz8_A 17 NSLPFVLFGGINVLESLDFTLDVCGEYVAVTRKLG-IPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARFGVPV- 94 (285)
T ss_dssp TTSCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHT-CCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCCE-
T ss_pred CCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHhhe-eeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeE-
Confidence 344677777788889999999999999874 23 2567776 5553 57777777764 59999
Q ss_pred EeecCCHHHHHHH
Q 036665 234 VTLIFSLARYEEV 246 (440)
Q Consensus 234 ~TlIFS~~Qa~a~ 246 (440)
+|-+|++.+...+
T Consensus 95 ~Tev~d~~~v~~l 107 (285)
T 3sz8_A 95 ITDVHEAEQAAPV 107 (285)
T ss_dssp EEECCSGGGHHHH
T ss_pred EEEeCCHHHHHHH
Confidence 6889999986544
No 31
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=22.43 E-value=6.1e+02 Score=25.55 Aligned_cols=74 Identities=19% Similarity=0.283 Sum_probs=55.0
Q ss_pred CCccEEEEe--cCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHH-CCCceEEeecCCHHHHHHHHHH
Q 036665 173 GDGYVSVEV--SPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVIS-QGISVNVTLIFSLARYEEVIDA 249 (440)
Q Consensus 173 ~~G~VS~EV--dP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~-~GI~vN~TlIFS~~Qa~a~aqA 249 (440)
.+-+|++|- +-. -.|.+++++|.++|.+. |-+=|=|-+|. .+-.+|++++.+ ..||+=+-.=|...-+.+|+++
T Consensus 28 G~~Pi~VQSMtnt~-T~D~~atv~Qi~~l~~a-G~diVRvavp~-~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~ 104 (366)
T 3noy_A 28 GDAPIVVQSMTSTK-THDVEATLNQIKRLYEA-GCEIVRVAVPH-KEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEK 104 (366)
T ss_dssp TTSCCEEEEECCSC-TTCHHHHHHHHHHHHHT-TCCEEEEECCS-HHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHT
T ss_pred CCCcEEEEEecCCC-CcCHHHHHHHHHHHHHc-CCCEEEeCCCC-hHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHh
Confidence 344666664 222 37999999999999986 55777788886 455677777765 4788888888999888777665
No 32
>2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* 2w4n_A* 2yep_A*
Probab=21.08 E-value=1.3e+02 Score=27.36 Aligned_cols=48 Identities=23% Similarity=0.166 Sum_probs=34.0
Q ss_pred ccccchHHHHHHHHHHHHHHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhh
Q 036665 292 ALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLY 350 (440)
Q Consensus 292 a~~~~G~~~Ia~a~~~y~~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~ 350 (440)
|-..-|..++.+++.+-+.-.+. -|.++..||.+||||-....+-+..
T Consensus 69 ANA~TG~~G~~da~~~~~~~A~~-----------lg~~~~~Vlv~STGVIG~~Lp~dki 116 (173)
T 2v4i_A 69 ANVATGLEGEENAREVREAVARA-----------LGLPEGEMLIASTGVIGRQYPMESI 116 (173)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHH-----------TTCCGGGEEEEEESCSSCCCCHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHH-----------hCCCchhEEEecCcccCcCCCHHHH
Confidence 33456788888888777765432 4788889999999987765554433
No 33
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=20.40 E-value=1.1e+02 Score=27.03 Aligned_cols=51 Identities=12% Similarity=-0.025 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEcCC-CcchHHHHHHHHHC--CCceEEeecCC
Q 036665 187 DDTQGTVEAAKWLHKVVNRPNVYIKIPA-TAPCVPSIKEVISQ--GISVNVTLIFS 239 (440)
Q Consensus 187 ~D~e~~v~eA~~L~~~v~r~nv~IKIPa-T~eGi~Ai~~L~~~--GI~vN~TlIFS 239 (440)
.|.++.++.++.+...+ +=+++-+|- +..|++.++++.+. ++++-+++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~--diie~G~p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~ 63 (211)
T 3f4w_A 10 LTLPEAMVFMDKVVDDV--DIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIM 63 (211)
T ss_dssp CCHHHHHHHHHHHGGGC--SEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEEC
T ss_pred CCHHHHHHHHHHhhcCc--cEEEeCcHHHHhccHHHHHHHHHhCCCCEEEEEEEec
Confidence 47888888888874332 234777787 78999999999886 78888888776
Done!