Query 036672
Match_columns 170
No_of_seqs 126 out of 1295
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 04:22:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036672.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036672hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 100.0 2.1E-29 4.5E-34 186.1 15.5 156 1-159 17-212 (231)
2 PRK09481 sspA stringent starva 100.0 7.6E-29 1.6E-33 184.4 16.6 150 1-159 18-203 (211)
3 PLN02378 glutathione S-transfe 100.0 1.1E-28 2.4E-33 183.9 12.1 151 1-159 19-200 (213)
4 TIGR00862 O-ClC intracellular 100.0 1E-27 2.3E-32 180.2 14.3 156 1-157 18-219 (236)
5 PLN02817 glutathione dehydroge 100.0 2.8E-27 6.1E-32 181.1 15.6 151 1-157 72-250 (265)
6 PLN02473 glutathione S-transfe 99.9 9.1E-26 2E-30 168.0 15.0 151 1-158 10-211 (214)
7 PRK15113 glutathione S-transfe 99.9 5.6E-25 1.2E-29 163.9 16.7 148 1-159 15-209 (214)
8 PRK13972 GSH-dependent disulfi 99.9 2E-25 4.2E-30 166.4 13.7 148 2-159 9-206 (215)
9 PRK10542 glutathionine S-trans 99.9 6.6E-25 1.4E-29 161.7 15.1 147 2-158 8-197 (201)
10 TIGR01262 maiA maleylacetoacet 99.9 1.5E-24 3.2E-29 160.9 15.4 151 1-159 7-205 (210)
11 PLN02395 glutathione S-transfe 99.9 1.6E-24 3.6E-29 161.2 15.2 152 2-160 10-212 (215)
12 PRK10357 putative glutathione 99.9 3.7E-24 8.1E-29 158.0 13.9 150 1-158 8-200 (202)
13 PRK11752 putative S-transferas 99.9 1.4E-23 3E-28 161.1 15.7 154 2-159 52-259 (264)
14 COG0625 Gst Glutathione S-tran 99.9 3.3E-23 7.2E-28 154.0 14.8 143 1-153 8-199 (211)
15 KOG1422 Intracellular Cl- chan 99.9 4.6E-23 9.9E-28 148.4 11.9 153 2-155 21-202 (221)
16 PTZ00057 glutathione s-transfe 99.9 4.8E-21 1E-25 141.9 14.9 151 2-160 13-201 (205)
17 KOG0868 Glutathione S-transfer 99.9 2.6E-21 5.7E-26 136.0 11.7 149 2-158 14-207 (217)
18 PRK10387 glutaredoxin 2; Provi 99.8 1.8E-20 3.8E-25 139.0 11.7 139 1-152 8-207 (210)
19 KOG0867 Glutathione S-transfer 99.8 7.1E-20 1.5E-24 137.5 12.8 149 2-157 11-208 (226)
20 TIGR02182 GRXB Glutaredoxin, G 99.8 4.8E-20 1.1E-24 137.0 10.8 139 1-152 7-206 (209)
21 KOG4420 Uncharacterized conser 99.8 1.4E-19 2.9E-24 134.2 9.6 79 81-160 208-289 (325)
22 cd03203 GST_C_Lambda GST_C fam 99.7 1.6E-16 3.5E-21 108.2 10.5 109 51-159 1-112 (120)
23 KOG1695 Glutathione S-transfer 99.6 9.6E-15 2.1E-19 107.4 14.0 152 4-161 14-203 (206)
24 cd03184 GST_C_Omega GST_C fami 99.6 1.5E-15 3.3E-20 103.8 9.1 106 54-160 2-115 (124)
25 cd03186 GST_C_SspA GST_N famil 99.6 4E-15 8.7E-20 99.0 10.8 96 52-155 1-106 (107)
26 cd03061 GST_N_CLIC GST_N famil 99.6 6.6E-16 1.4E-20 99.5 5.1 48 1-49 21-69 (91)
27 cd03196 GST_C_5 GST_C family, 99.6 4.8E-14 1E-18 95.3 10.5 100 50-155 2-114 (115)
28 PLN02907 glutamate-tRNA ligase 99.6 6.5E-14 1.4E-18 119.8 13.5 119 5-151 13-159 (722)
29 cd03201 GST_C_DHAR GST_C famil 99.5 4.6E-14 1E-18 96.2 8.7 76 81-158 33-110 (121)
30 cd03209 GST_C_Mu GST_C family, 99.5 1.2E-13 2.7E-18 94.0 10.6 99 54-160 2-111 (121)
31 cd03198 GST_C_CLIC GST_C famil 99.5 6.2E-14 1.3E-18 96.7 9.1 79 81-159 32-125 (134)
32 cd03190 GST_C_ECM4_like GST_C 99.5 7E-14 1.5E-18 97.9 8.7 104 53-159 3-119 (142)
33 cd03185 GST_C_Tau GST_C family 99.5 1.2E-13 2.5E-18 94.4 9.5 104 52-159 1-116 (126)
34 cd03210 GST_C_Pi GST_C family, 99.5 2.4E-13 5.1E-18 93.2 10.6 102 54-160 3-114 (126)
35 cd03208 GST_C_Alpha GST_C fami 99.5 4.8E-13 1E-17 93.1 10.9 101 54-160 3-117 (137)
36 COG0435 ECM4 Predicted glutath 99.5 9.1E-14 2E-18 104.3 5.9 83 81-166 208-294 (324)
37 cd03191 GST_C_Zeta GST_C famil 99.5 4.7E-13 1E-17 90.9 9.0 100 52-158 1-119 (121)
38 cd03182 GST_C_GTT2_like GST_C 99.5 6.7E-13 1.4E-17 89.4 9.4 94 51-152 1-117 (117)
39 cd03188 GST_C_Beta GST_C famil 99.4 7.8E-13 1.7E-17 88.5 8.3 93 54-155 2-113 (114)
40 cd03060 GST_N_Omega_like GST_N 99.4 3.3E-13 7.2E-18 83.4 5.2 47 1-48 8-55 (71)
41 PF00043 GST_C: Glutathione S- 99.4 1.1E-12 2.5E-17 85.1 7.7 62 81-150 31-95 (95)
42 cd03195 GST_C_4 GST_C family, 99.4 5.4E-12 1.2E-16 85.1 10.2 96 52-157 1-112 (114)
43 cd03207 GST_C_8 GST_C family, 99.4 1.9E-12 4E-17 85.5 7.4 67 81-157 33-101 (103)
44 PF13409 GST_N_2: Glutathione 99.4 5.2E-13 1.1E-17 82.3 4.3 47 1-48 1-52 (70)
45 cd03187 GST_C_Phi GST_C family 99.4 1.3E-12 2.8E-17 88.1 6.4 68 81-155 48-117 (118)
46 KOG3029 Glutathione S-transfer 99.4 3.1E-12 6.7E-17 96.4 8.9 61 81-147 291-352 (370)
47 cd03183 GST_C_Theta GST_C fami 99.4 3E-12 6.5E-17 87.5 8.2 72 81-159 48-123 (126)
48 cd03177 GST_C_Delta_Epsilon GS 99.4 6.1E-12 1.3E-16 85.1 9.4 97 54-158 2-112 (118)
49 cd03189 GST_C_GTT1_like GST_C 99.4 1E-11 2.2E-16 83.9 10.3 92 50-150 3-119 (119)
50 cd03052 GST_N_GDAP1 GST_N fami 99.4 1.1E-12 2.4E-17 81.5 4.9 48 1-49 8-59 (73)
51 cd03181 GST_C_EFB1gamma GST_C 99.3 6.7E-12 1.4E-16 85.3 8.5 99 54-158 1-116 (123)
52 PF13417 GST_N_3: Glutathione 99.3 1E-12 2.2E-17 82.0 3.9 48 1-49 6-54 (75)
53 PF13410 GST_C_2: Glutathione 99.3 3.2E-12 7E-17 78.3 6.0 60 81-146 9-69 (69)
54 cd03178 GST_C_Ure2p_like GST_C 99.3 2.7E-12 5.8E-17 85.9 5.6 95 54-156 1-112 (113)
55 KOG2903 Predicted glutathione 99.3 1.5E-12 3.2E-17 97.1 4.2 79 81-160 206-290 (319)
56 cd03204 GST_C_GDAP1 GST_C fami 99.3 5.3E-12 1.2E-16 84.5 6.3 67 81-152 32-111 (111)
57 cd03059 GST_N_SspA GST_N famil 99.3 4.2E-12 9.2E-17 78.5 5.2 48 1-49 8-56 (73)
58 cd03180 GST_C_2 GST_C family, 99.3 2.4E-11 5.1E-16 80.8 8.8 90 54-152 2-110 (110)
59 cd03194 GST_C_3 GST_C family, 99.3 1.1E-10 2.3E-15 78.8 10.4 69 81-157 44-113 (114)
60 cd03043 GST_N_1 GST_N family, 99.2 2.3E-11 4.9E-16 75.6 5.3 48 1-49 9-59 (73)
61 cd03058 GST_N_Tau GST_N family 99.2 2.4E-11 5.1E-16 75.5 5.1 48 1-49 8-57 (74)
62 cd03045 GST_N_Delta_Epsilon GS 99.2 3E-11 6.5E-16 74.9 5.1 48 1-49 8-59 (74)
63 cd03206 GST_C_7 GST_C family, 99.2 5.9E-11 1.3E-15 78.0 6.1 63 81-152 36-100 (100)
64 cd03200 GST_C_JTV1 GST_C famil 99.2 2.6E-10 5.6E-15 74.6 9.0 79 50-147 13-93 (96)
65 cd03202 GST_C_etherase_LigE GS 99.2 8.2E-11 1.8E-15 80.5 6.9 61 81-148 61-123 (124)
66 cd03053 GST_N_Phi GST_N family 99.2 4.4E-11 9.6E-16 74.6 5.1 48 1-49 9-60 (76)
67 cd03041 GST_N_2GST_N GST_N fam 99.2 3.7E-11 8E-16 75.4 4.6 47 1-48 9-57 (77)
68 cd03049 GST_N_3 GST_N family, 99.2 5.8E-11 1.3E-15 73.5 5.2 48 1-49 8-59 (73)
69 cd03055 GST_N_Omega GST_N fami 99.2 6.1E-11 1.3E-15 76.4 5.3 47 1-48 26-73 (89)
70 cd03044 GST_N_EF1Bgamma GST_N 99.2 5.8E-11 1.2E-15 74.0 4.7 47 1-48 8-57 (75)
71 cd03056 GST_N_4 GST_N family, 99.2 7.3E-11 1.6E-15 72.8 5.1 48 1-49 8-59 (73)
72 cd03051 GST_N_GTT2_like GST_N 99.1 1.1E-10 2.3E-15 72.1 4.9 47 1-48 8-58 (74)
73 PF14497 GST_C_3: Glutathione 99.1 3.2E-10 7E-15 74.3 7.0 85 51-147 2-97 (99)
74 cd03047 GST_N_2 GST_N family, 99.1 1.7E-10 3.8E-15 71.4 5.0 48 1-49 8-59 (73)
75 cd03037 GST_N_GRX2 GST_N famil 99.1 2.2E-10 4.7E-15 70.6 5.0 46 1-48 8-54 (71)
76 cd03076 GST_N_Pi GST_N family, 99.1 1.4E-10 3E-15 72.0 3.8 48 1-49 9-57 (73)
77 cd03192 GST_C_Sigma_like GST_C 99.1 7.2E-10 1.6E-14 73.1 7.4 88 54-147 2-104 (104)
78 KOG4244 Failed axon connection 99.1 1.2E-09 2.5E-14 82.1 9.1 134 1-147 60-270 (281)
79 cd03050 GST_N_Theta GST_N fami 99.1 3.2E-10 6.8E-15 70.8 5.2 48 1-49 8-59 (76)
80 cd03038 GST_N_etherase_LigE GS 99.1 2.1E-10 4.6E-15 73.0 4.2 47 1-49 15-66 (84)
81 cd03193 GST_C_Metaxin GST_C fa 99.0 7.7E-10 1.7E-14 70.9 5.9 65 80-147 21-87 (88)
82 cd03179 GST_C_1 GST_C family, 99.0 6.1E-10 1.3E-14 73.4 5.4 85 54-147 2-104 (105)
83 cd03042 GST_N_Zeta GST_N famil 99.0 6.5E-10 1.4E-14 68.6 4.9 48 1-49 8-59 (73)
84 cd03039 GST_N_Sigma_like GST_N 99.0 3.9E-10 8.4E-15 69.6 3.9 48 1-49 8-57 (72)
85 cd03048 GST_N_Ure2p_like GST_N 99.0 6.5E-10 1.4E-14 70.2 4.8 46 2-48 9-58 (81)
86 PF14834 GST_C_4: Glutathione 99.0 1.2E-08 2.5E-13 67.6 10.4 97 51-157 1-113 (117)
87 cd00299 GST_C_family Glutathio 99.0 1.5E-09 3.4E-14 70.3 6.1 61 81-147 39-100 (100)
88 cd03080 GST_N_Metaxin_like GST 98.9 1.9E-09 4.2E-14 67.1 4.4 41 1-49 16-57 (75)
89 cd03046 GST_N_GTT1_like GST_N 98.9 5E-09 1.1E-13 65.1 4.9 46 3-49 9-58 (76)
90 cd03040 GST_N_mPGES2 GST_N fam 98.8 3.6E-09 7.8E-14 66.1 3.8 45 1-48 9-54 (77)
91 cd03057 GST_N_Beta GST_N famil 98.8 7E-09 1.5E-13 64.7 4.6 44 4-48 10-57 (77)
92 cd03197 GST_C_mPGES2 GST_C fam 98.8 1.2E-08 2.6E-13 71.3 6.0 60 81-147 82-143 (149)
93 cd00570 GST_N_family Glutathio 98.8 1.1E-08 2.4E-13 61.7 4.9 48 1-49 8-57 (71)
94 cd03054 GST_N_Metaxin GST_N fa 98.8 1.2E-08 2.6E-13 62.9 4.4 41 1-49 15-56 (72)
95 cd03205 GST_C_6 GST_C family, 98.8 2.3E-08 5.1E-13 65.3 5.9 58 81-147 40-98 (98)
96 cd03211 GST_C_Metaxin2 GST_C f 98.7 3.5E-08 7.6E-13 67.6 5.1 64 81-147 60-125 (126)
97 PF02798 GST_N: Glutathione S- 98.7 3.1E-08 6.7E-13 61.9 4.3 46 3-49 10-61 (76)
98 cd03075 GST_N_Mu GST_N family, 98.6 5.6E-08 1.2E-12 61.6 4.6 48 2-49 9-65 (82)
99 COG2999 GrxB Glutaredoxin 2 [P 98.6 5E-07 1.1E-11 64.3 9.5 137 2-150 9-205 (215)
100 PRK10638 glutaredoxin 3; Provi 98.6 6.5E-08 1.4E-12 61.4 4.3 48 1-49 11-60 (83)
101 cd03212 GST_C_Metaxin1_3 GST_C 98.5 1.5E-07 3.2E-12 65.5 5.0 64 81-147 67-132 (137)
102 PRK10329 glutaredoxin-like pro 98.4 6.5E-07 1.4E-11 56.6 4.3 48 1-49 10-58 (81)
103 cd02976 NrdH NrdH-redoxin (Nrd 98.3 7.3E-07 1.6E-11 54.3 4.2 48 1-49 9-58 (73)
104 cd03077 GST_N_Alpha GST_N fami 98.3 1.5E-06 3.2E-11 54.6 4.7 44 2-49 10-59 (79)
105 TIGR02190 GlrX-dom Glutaredoxi 98.2 2.1E-06 4.5E-11 53.9 4.4 48 1-49 17-65 (79)
106 cd03027 GRX_DEP Glutaredoxin ( 98.2 2.1E-06 4.5E-11 53.0 4.1 48 1-49 10-59 (73)
107 TIGR02194 GlrX_NrdH Glutaredox 98.1 4.5E-06 9.8E-11 51.4 4.0 48 1-49 8-56 (72)
108 cd03029 GRX_hybridPRX5 Glutare 98.0 1.2E-05 2.5E-10 49.4 4.7 48 1-49 10-58 (72)
109 cd02066 GRX_family Glutaredoxi 98.0 9.8E-06 2.1E-10 49.0 4.1 48 1-49 9-58 (72)
110 COG0695 GrxC Glutaredoxin and 98.0 1.6E-05 3.4E-10 50.1 5.0 49 1-49 10-61 (80)
111 KOG3027 Mitochondrial outer me 98.0 0.00017 3.6E-09 52.8 10.6 62 81-147 180-245 (257)
112 cd03079 GST_N_Metaxin2 GST_N f 98.0 1.1E-05 2.4E-10 49.9 3.9 41 2-49 17-58 (74)
113 TIGR02196 GlrX_YruB Glutaredox 98.0 1.1E-05 2.3E-10 49.1 3.7 48 1-49 9-58 (74)
114 TIGR02200 GlrX_actino Glutared 97.8 2.8E-05 6.2E-10 47.9 4.0 48 1-49 9-59 (77)
115 TIGR02181 GRX_bact Glutaredoxi 97.8 4.3E-05 9.4E-10 47.7 4.0 48 1-49 8-57 (79)
116 cd03418 GRX_GRXb_1_3_like Glut 97.7 4.4E-05 9.6E-10 47.0 3.9 48 1-49 9-59 (75)
117 TIGR02189 GlrX-like_plant Glut 97.6 0.00014 3.1E-09 47.6 5.2 48 1-49 17-69 (99)
118 PF00462 Glutaredoxin: Glutare 97.6 4.1E-05 8.9E-10 45.2 2.2 48 1-49 8-57 (60)
119 PHA03050 glutaredoxin; Provisi 97.6 0.0002 4.3E-09 47.7 5.2 48 1-49 22-77 (108)
120 TIGR00365 monothiol glutaredox 97.4 0.0002 4.3E-09 46.8 4.0 48 1-49 26-75 (97)
121 cd03028 GRX_PICOT_like Glutare 97.4 0.00027 5.9E-09 45.4 3.9 48 1-49 22-71 (90)
122 cd03078 GST_N_Metaxin1_like GS 97.2 0.00072 1.6E-08 41.7 4.5 41 1-49 15-56 (73)
123 cd03419 GRX_GRXh_1_2_like Glut 97.2 0.001 2.2E-08 41.4 4.8 48 1-49 9-61 (82)
124 TIGR02180 GRX_euk Glutaredoxin 97.1 0.0013 2.8E-08 41.0 5.0 48 1-49 8-62 (84)
125 KOG3028 Translocase of outer m 96.9 0.029 6.2E-07 43.8 11.6 63 82-147 167-231 (313)
126 PRK11200 grxA glutaredoxin 1; 96.9 0.0019 4.1E-08 40.8 4.2 48 1-49 10-66 (85)
127 PF04399 Glutaredoxin2_C: Glut 96.9 0.0041 8.9E-08 42.8 6.0 60 81-151 62-123 (132)
128 PRK10824 glutaredoxin-4; Provi 96.6 0.0036 7.8E-08 42.1 4.0 48 1-49 29-78 (115)
129 cd03199 GST_C_GRX2 GST_C famil 96.5 0.0094 2E-07 40.8 5.6 59 81-150 63-123 (128)
130 TIGR02183 GRXA Glutaredoxin, G 96.2 0.01 2.2E-07 37.6 4.5 48 1-49 9-65 (86)
131 KOG1752 Glutaredoxin and relat 96.2 0.016 3.5E-07 38.2 5.3 48 1-49 23-75 (104)
132 PRK12759 bifunctional gluaredo 95.8 0.016 3.4E-07 47.6 4.5 49 1-49 11-68 (410)
133 PTZ00062 glutaredoxin; Provisi 95.2 0.03 6.6E-07 41.5 4.1 48 1-49 127-176 (204)
134 cd03031 GRX_GRX_like Glutaredo 95.1 0.036 7.9E-07 38.9 3.9 48 1-49 15-68 (147)
135 cd02973 TRX_GRX_like Thioredox 94.1 0.11 2.5E-06 30.7 4.0 47 1-49 10-60 (67)
136 PF10568 Tom37: Outer mitochon 93.5 0.23 4.9E-06 30.5 4.6 41 1-49 13-58 (72)
137 PF05768 DUF836: Glutaredoxin- 93.4 0.23 5E-06 30.9 4.7 45 2-49 10-57 (81)
138 cd01659 TRX_superfamily Thiore 92.9 0.18 4E-06 28.1 3.5 48 1-49 8-61 (69)
139 TIGR00411 redox_disulf_1 small 91.3 0.55 1.2E-05 28.6 4.5 47 1-49 10-61 (82)
140 cd03036 ArsC_like Arsenate Red 91.0 0.18 3.8E-06 33.6 2.1 25 1-25 8-33 (111)
141 KOG1147 Glutamyl-tRNA syntheta 89.4 0.39 8.5E-06 40.5 3.2 87 53-155 73-161 (712)
142 TIGR00412 redox_disulf_2 small 89.1 1.2 2.6E-05 27.2 4.6 44 1-49 9-57 (76)
143 cd02977 ArsC_family Arsenate R 88.8 0.65 1.4E-05 30.3 3.4 24 1-24 8-32 (105)
144 PF13192 Thioredoxin_3: Thiore 88.7 1.1 2.3E-05 27.5 4.2 45 2-49 10-57 (76)
145 cd03030 GRX_SH3BGR Glutaredoxi 88.3 0.99 2.1E-05 29.0 3.9 44 5-49 19-68 (92)
146 cd03026 AhpF_NTD_C TRX-GRX-lik 86.6 1.2 2.6E-05 28.3 3.6 47 1-49 23-73 (89)
147 PRK01655 spxA transcriptional 86.2 1.1 2.3E-05 30.8 3.4 24 1-24 9-33 (131)
148 TIGR01617 arsC_related transcr 85.5 0.79 1.7E-05 30.6 2.4 24 1-24 8-32 (117)
149 cd03032 ArsC_Spx Arsenate Redu 84.7 1.4 3E-05 29.4 3.4 24 1-24 9-33 (115)
150 PF11801 Tom37_C: Tom37 C-term 82.5 3.1 6.7E-05 29.8 4.6 39 83-121 113-153 (168)
151 KOG3425 Uncharacterized conser 81.9 2.1 4.7E-05 28.9 3.3 45 1-46 44-100 (128)
152 PRK12559 transcriptional regul 80.2 2.5 5.4E-05 29.0 3.3 25 1-25 9-34 (131)
153 PHA02125 thioredoxin-like prot 79.6 4.5 9.7E-05 24.5 4.0 45 1-48 9-53 (75)
154 PRK13344 spxA transcriptional 78.4 3.4 7.3E-05 28.4 3.5 25 1-25 9-34 (132)
155 cd03035 ArsC_Yffb Arsenate Red 72.9 5.6 0.00012 26.1 3.3 24 1-24 8-32 (105)
156 PF06110 DUF953: Eukaryotic pr 71.6 1.5 3.3E-05 29.6 0.4 45 1-47 37-95 (119)
157 cd02975 PfPDO_like_N Pyrococcu 69.3 9.5 0.00021 25.1 3.9 45 1-47 33-81 (113)
158 cd03033 ArsC_15kD Arsenate Red 65.1 9.7 0.00021 25.3 3.2 23 2-24 10-33 (113)
159 TIGR01295 PedC_BrcD bacterioci 61.6 17 0.00038 24.3 4.0 25 1-25 34-61 (122)
160 KOG1668 Elongation factor 1 be 59.1 9 0.00019 28.9 2.4 57 84-153 10-68 (231)
161 cd02984 TRX_PICOT TRX domain, 54.0 24 0.00053 21.8 3.6 45 1-47 25-74 (97)
162 TIGR02187 GlrX_arch Glutaredox 53.1 25 0.00055 25.9 4.0 47 1-49 144-194 (215)
163 TIGR03143 AhpF_homolog putativ 51.4 21 0.00045 30.6 3.8 47 1-49 487-537 (555)
164 PF04908 SH3BGR: SH3-binding, 48.9 28 0.0006 22.7 3.2 21 5-25 20-41 (99)
165 PRK15317 alkyl hydroperoxide r 47.1 22 0.00047 30.1 3.2 47 1-49 127-177 (517)
166 cd02959 ERp19 Endoplasmic reti 47.0 35 0.00076 22.6 3.6 46 1-47 30-82 (117)
167 TIGR03140 AhpF alkyl hydropero 46.1 23 0.00051 29.9 3.2 47 1-49 128-178 (515)
168 cd02949 TRX_NTR TRX domain, no 43.4 50 0.0011 20.6 3.8 44 1-46 24-72 (97)
169 cd02952 TRP14_like Human TRX-r 41.9 44 0.00096 22.4 3.5 45 1-47 39-96 (119)
170 COG4545 Glutaredoxin-related p 41.1 55 0.0012 20.3 3.4 49 1-49 11-72 (85)
171 TIGR01616 nitro_assoc nitrogen 40.6 45 0.00098 22.6 3.4 23 2-24 11-34 (126)
172 PRK10026 arsenate reductase; P 37.8 32 0.00069 24.0 2.3 23 2-24 12-35 (141)
173 PF11287 DUF3088: Protein of u 37.5 82 0.0018 21.0 4.1 49 1-49 23-76 (112)
174 PRK10853 putative reductase; P 35.8 36 0.00079 22.8 2.3 23 2-24 10-33 (118)
175 PF00085 Thioredoxin: Thioredo 35.0 1.1E+02 0.0024 18.7 4.6 45 1-47 28-77 (103)
176 cd02989 Phd_like_TxnDC9 Phosdu 34.7 1E+02 0.0023 20.1 4.4 45 1-47 33-81 (113)
177 cd03034 ArsC_ArsC Arsenate Red 33.7 42 0.0009 22.1 2.3 23 2-24 9-32 (112)
178 cd02951 SoxW SoxW family; SoxW 33.2 83 0.0018 20.6 3.8 12 1-12 25-36 (125)
179 TIGR00014 arsC arsenate reduct 32.2 45 0.00097 22.0 2.3 23 2-24 9-32 (114)
180 PF03960 ArsC: ArsC family; I 28.3 49 0.0011 21.5 2.0 23 2-24 6-29 (110)
181 COG1830 FbaB DhnA-type fructos 27.6 1.1E+02 0.0023 23.9 3.9 41 6-49 170-210 (265)
182 cd02947 TRX_family TRX family; 27.1 1.4E+02 0.003 17.4 4.2 45 1-47 21-69 (93)
183 cd02953 DsbDgamma DsbD gamma f 26.7 1.4E+02 0.003 18.8 3.9 45 1-46 22-77 (104)
184 TIGR01068 thioredoxin thioredo 26.7 1.2E+02 0.0026 18.4 3.6 45 1-47 25-74 (101)
185 PRK09381 trxA thioredoxin; Pro 26.7 1.1E+02 0.0025 19.3 3.5 45 1-47 32-81 (109)
186 cd02999 PDI_a_ERp44_like PDIa 26.4 1.3E+02 0.0029 19.0 3.8 45 1-46 29-77 (100)
187 PTZ00051 thioredoxin; Provisio 25.0 1.5E+02 0.0032 18.2 3.7 45 1-47 29-77 (98)
188 cd02963 TRX_DnaJ TRX domain, D 25.0 1.5E+02 0.0032 19.1 3.9 44 1-46 35-84 (111)
189 cd02954 DIM1 Dim1 family; Dim1 23.0 2.1E+02 0.0046 19.0 4.3 45 1-47 25-74 (114)
190 PRK10877 protein disulfide iso 22.5 71 0.0015 24.0 2.1 22 1-22 118-141 (232)
191 PRK06852 aldolase; Validated 22.2 1.3E+02 0.0029 23.8 3.7 42 5-49 191-238 (304)
192 PF13728 TraF: F plasmid trans 22.2 1.8E+02 0.0038 21.7 4.2 24 2-25 132-158 (215)
193 COG1393 ArsC Arsenate reductas 21.4 1.6E+02 0.0034 19.7 3.4 23 2-24 11-34 (117)
194 cd02993 PDI_a_APS_reductase PD 20.4 2.1E+02 0.0045 18.2 3.9 45 1-46 32-83 (109)
195 PF07862 Nif11: Nitrogen fixat 20.3 1.6E+02 0.0034 16.0 2.8 22 138-159 4-26 (49)
196 COG0278 Glutaredoxin-related p 20.1 2.1E+02 0.0046 18.8 3.6 46 2-49 30-79 (105)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.1e-29 Score=186.06 Aligned_cols=156 Identities=31% Similarity=0.458 Sum_probs=129.0
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcC-CCCCcceEecCC-------------------------CChH
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVY-LANKMPSLEHNN-------------------------EDPN 53 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~n-P~g~vPvL~~~~-------------------------~~~~ 53 (170)
+|||++|++++|.+| |+||.+++|+.++++|+++ .| +.+|||||+++| +||+
T Consensus 17 ~sPfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~-~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iLP~DPy 95 (231)
T KOG0406|consen 17 FSPFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLE-KNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPILPSDPY 95 (231)
T ss_pred cChHHHHHHHHHHhcCCceEEEecCCCCCCHHHHH-hccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCCCCCHH
Confidence 699999999999999 9999999999999999999 69 789999999998 7899
Q ss_pred HHHHHHHHHHhhhhhh---HHHhhhc-cCCH-----HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhh
Q 036672 54 KREFAEELFSYTDTFN---KTARSSL-EGDG-----NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKP 123 (170)
Q Consensus 54 ~~a~~~~~~~~~~~~~---~~~~~~~-~~~~-----~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~ 123 (170)
+||+.+.|+.+++.-. ..+.... .++. +++.+.|+.||+.|.. +++|++|+ +++.|++++|++.++..
T Consensus 96 ~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k--~k~~fgG~~~G~vDi~~~p~~~~~~~ 173 (231)
T KOG0406|consen 96 ERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGK--GKDFFGGETIGFVDIAIGPSFERWLA 173 (231)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCCcCHhhhhHHhhHHHHHH
Confidence 9999999999998522 2222222 2222 5689999999999973 77899999 99999999998888776
Q ss_pred hhhcccc--cccCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 124 FLLEAKK--YDITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 124 ~~~~~~~--~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
......+ +....++|.|.+|.+|| +++++++++.+.
T Consensus 174 ~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~ 212 (231)
T KOG0406|consen 174 VLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDS 212 (231)
T ss_pred HHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCH
Confidence 6533332 22346899999999999 999999985543
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.96 E-value=7.6e-29 Score=184.41 Aligned_cols=150 Identities=15% Similarity=0.255 Sum_probs=120.6
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC------------------------CChHHH
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN------------------------EDPNKR 55 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~------------------------~~~~~~ 55 (170)
.||||+||+++|+++ ++||.+.+|..+++++|++ +||.|+||+|+++| .++.++
T Consensus 18 ~s~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~-~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l~p~~~~~r 96 (211)
T PRK09481 18 TDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLID-LNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVAR 96 (211)
T ss_pred CChhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHH-hCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 489999999999999 9999999998888889999 99999999999988 456788
Q ss_pred HHHHHHHHhhhhhhHHHhhhc-cCC-------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhh
Q 036672 56 EFAEELFSYTDTFNKTARSSL-EGD-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLL 126 (170)
Q Consensus 56 a~~~~~~~~~~~~~~~~~~~~-~~~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~ 126 (170)
+.+++|+.++..........+ .++ .+.+.+.++.+|++|+ +++|++|+ +|+||+++++++.++...
T Consensus 97 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~---~~~~l~G~~~t~AD~~l~~~~~~~~~~-- 171 (211)
T PRK09481 97 GESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFG---EKPYFMSEEFSLVDCYLAPLLWRLPVL-- 171 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhc---cCCcccCCCccHHHHHHHHHHHHHHhc--
Confidence 888888877643221221111 111 1567888999999996 67999999 999999999999877643
Q ss_pred cccccccC-CCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 127 EAKKYDIT-AGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 127 ~~~~~~~~-~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
+.++. ..+|+|++|+++| +||++++++...
T Consensus 172 ---~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~~ 203 (211)
T PRK09481 172 ---GIELSGPGAKELKGYMTRVFERDSFLASLTEA 203 (211)
T ss_pred ---CCCCCCCCChhHHHHHHHHhccHHHHHHcCHH
Confidence 33443 5799999999999 999999986554
No 3
>PLN02378 glutathione S-transferase DHAR1
Probab=99.96 E-value=1.1e-28 Score=183.87 Aligned_cols=151 Identities=23% Similarity=0.427 Sum_probs=113.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC----------------------CChHHHHH
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN----------------------EDPNKREF 57 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~----------------------~~~~~~a~ 57 (170)
.||||+||+++|+++ ++|+.+.+|+.+++++|++ +||.|+||+|+++| .++.+++.
T Consensus 19 ~~p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~-inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~~~~~~a~ 97 (213)
T PLN02378 19 DCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLD-ISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLKTPAEFAS 97 (213)
T ss_pred CCcchHHHHHHHHHcCCCCeEEEeCcccCCHHHHH-hCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 599999999999999 9999999999888899999 99999999999987 22333443
Q ss_pred HHHHHHhhhhhhHHHhhhcc----CC--HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccc
Q 036672 58 AEELFSYTDTFNKTARSSLE----GD--GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKK 130 (170)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~----~~--~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~ 130 (170)
++..+. ..+...+. .+ .+.+.+.|+.+|++|+. ++++|++|+ +|+||++++|++.++.........
T Consensus 98 i~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~ 170 (213)
T PLN02378 98 VGSNIF------GTFGTFLKSKDSNDGSEHALLVELEALENHLKS-HDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKS 170 (213)
T ss_pred HHHHHH------HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhc-CCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcC
Confidence 332211 11111111 11 25677889999999973 247899999 999999999998887643221223
Q ss_pred cccCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 131 YDITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 131 ~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
+++..++|++.+|+++| +||++++++...
T Consensus 171 ~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~ 200 (213)
T PLN02378 171 WSVPESFPHVHNYMKTLFSLDSFEKTKTEE 200 (213)
T ss_pred CCchhHhHHHHHHHHHHhcCCCeecccCCh
Confidence 44457899999999999 999999885543
No 4
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.95 E-value=1e-27 Score=180.24 Aligned_cols=156 Identities=20% Similarity=0.286 Sum_probs=114.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC----CChHHHHHHHHH--------------
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN----EDPNKREFAEEL-------------- 61 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~----~~~~~~a~~~~~-------------- 61 (170)
.||||+||+++|++| ++|+++.+|+.+++++|++ +||.|+||||+++| .+.....+.+..
T Consensus 18 ~cp~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~-inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~ 96 (236)
T TIGR00862 18 NCPFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQN-LAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHP 96 (236)
T ss_pred CCHhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHH-HCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCH
Confidence 599999999999999 9999999999888899999 99999999999988 110000110000
Q ss_pred --HHhhhhhhHHHhhhcc-CC-------HHHHHHHHHHHHhhhhcC---------------CCCCcccCC-CchHHHHHH
Q 036672 62 --FSYTDTFNKTARSSLE-GD-------GNEARVAFHYFETPLSKF---------------NDGPFLQGQ-FSLADIAYA 115 (170)
Q Consensus 62 --~~~~~~~~~~~~~~~~-~~-------~~~l~~~l~~le~~L~~~---------------~~~~~l~G~-~t~AD~~l~ 115 (170)
......+...+...+. .. .+++.++|+.||+.|... ++++|++|+ +|+|||+++
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~ 176 (236)
T TIGR00862 97 ESNTAGLDIFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLL 176 (236)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHH
Confidence 0000011111111111 11 145889999999999621 157999999 999999999
Q ss_pred HHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHH
Q 036672 116 PFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYK 157 (170)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~ 157 (170)
|++.++.....+..++++.+++|+|.+|+++| ++|+|+.+..
T Consensus 177 p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p 219 (236)
T TIGR00862 177 PKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCP 219 (236)
T ss_pred HHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCC
Confidence 99999986543445777778999999999999 9999999843
No 5
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.95 E-value=2.8e-27 Score=181.15 Aligned_cols=151 Identities=23% Similarity=0.433 Sum_probs=115.8
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC----------------------CChHHHHH
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN----------------------EDPNKREF 57 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~----------------------~~~~~~a~ 57 (170)
.||||+||+++|+++ ++|+++.+++.++++||++ +||.|+||+|+++| .++.+++.
T Consensus 72 ~cp~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~-iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~~~~era~ 150 (265)
T PLN02817 72 DCPFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLK-ISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPLATPPEKAS 150 (265)
T ss_pred CCcHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHh-hCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCCCCHHHHHH
Confidence 499999999999999 9999999999888999999 89999999999887 23455665
Q ss_pred HHHHHHhhhhhhHHHhhhcc-CC--HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccccc
Q 036672 58 AEELFSYTDTFNKTARSSLE-GD--GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDI 133 (170)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~-~~--~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~ 133 (170)
+++++.. .+.. +..... .+ .+++.+.|+.||+.|++ +|+|++|+ +|+|||+++|.+.++........++++
T Consensus 151 i~~~l~~--~~~~-~~~~~~~~~~~~~~l~~~l~~LE~~L~~--~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i 225 (265)
T PLN02817 151 VGSKIFS--TFIG-FLKSKDPGDGTEQALLDELTSFDDYIKE--NGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSV 225 (265)
T ss_pred HHHHHHH--HHHH-HhccCCcchHHHHHHHHHHHHHHHHHhc--CCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5543321 1111 111011 11 25678889999999973 57999999 999999999999887643222234555
Q ss_pred CCCChHHHHHHHHh-cchHHHHHHH
Q 036672 134 TAGRPQLATWIEEM-KNEAFNQTYK 157 (170)
Q Consensus 134 ~~~~p~l~~w~~r~-~~p~~~~~~~ 157 (170)
.+.+|+|.+|+++| ++|+++++..
T Consensus 226 ~~~~P~L~~w~~ri~~rps~~~~~~ 250 (265)
T PLN02817 226 PDSLPFVKSYMKNIFSMESFVKTRA 250 (265)
T ss_pred cccCHHHHHHHHHHhcchhHhhcCC
Confidence 67899999999999 9999999844
No 6
>PLN02473 glutathione S-transferase
Probab=99.94 E-value=9.1e-26 Score=167.96 Aligned_cols=151 Identities=16% Similarity=0.257 Sum_probs=115.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecCC--------------------------C
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHNN--------------------------E 50 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~~--------------------------~ 50 (170)
.||+++||+++|+++ ++|+.+.+++. +.++++++ +||.|+||+|+++| .
T Consensus 10 ~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~-~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~ 88 (214)
T PLN02473 10 KAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLL-RQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGK 88 (214)
T ss_pred CCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHh-hCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCC
Confidence 389999999999999 99999999875 35578888 89999999999988 2
Q ss_pred ChHHHHHHHHHHHhhhhhhHH-----Hhh-hc----cC--CH-------HHHHHHHHHHHhhhhcCCCCCcccCC-CchH
Q 036672 51 DPNKREFAEELFSYTDTFNKT-----ARS-SL----EG--DG-------NEARVAFHYFETPLSKFNDGPFLQGQ-FSLA 110 (170)
Q Consensus 51 ~~~~~a~~~~~~~~~~~~~~~-----~~~-~~----~~--~~-------~~l~~~l~~le~~L~~~~~~~~l~G~-~t~A 110 (170)
++.+++++++|+.+....... ... .+ .. +. +.+.+.|+.+|+.|+ +++|++|+ +|+|
T Consensus 89 ~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~Gd~~t~A 165 (214)
T PLN02473 89 TLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLA---TNRYLGGDEFTLA 165 (214)
T ss_pred CHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhc---cCCcccCCCCCHH
Confidence 456788888888776542211 111 11 11 11 456778999999996 56899999 9999
Q ss_pred HHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHh
Q 036672 111 DIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKK 158 (170)
Q Consensus 111 D~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~ 158 (170)
|+++++.+.++.... ......+++|+|.+|+++| +||+++++...
T Consensus 166 Di~~~~~~~~~~~~~---~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 166 DLTHMPGMRYIMNET---SLSGLVTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred HHHHHHHHHHHHhcc---ccHHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 999999988764321 1112347899999999999 99999998754
No 7
>PRK15113 glutathione S-transferase; Provisional
Probab=99.93 E-value=5.6e-25 Score=163.92 Aligned_cols=148 Identities=18% Similarity=0.271 Sum_probs=115.8
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC---ChhhHhhhcCCCCCcceEecCC---------------------------
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN---RPDWYKMKVYLANKMPSLEHNN--------------------------- 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~---~~~~~~~~~nP~g~vPvL~~~~--------------------------- 49 (170)
.||||+||+++|+++ ++||.+.++..+ ..++|++ +||.|+||+|++||
T Consensus 15 ~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~-~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p 93 (214)
T PRK15113 15 FSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQG-YSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYP 93 (214)
T ss_pred CCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHh-cCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCC
Confidence 389999999999999 999999999754 4478999 99999999999988
Q ss_pred CChHHHHHHHHHHHhhh-hhhHHHh----h-hcc---CC------HHHHHHHHHHHHhhhhcCCCCCcccCCCchHHHHH
Q 036672 50 EDPNKREFAEELFSYTD-TFNKTAR----S-SLE---GD------GNEARVAFHYFETPLSKFNDGPFLQGQFSLADIAY 114 (170)
Q Consensus 50 ~~~~~~a~~~~~~~~~~-~~~~~~~----~-~~~---~~------~~~l~~~l~~le~~L~~~~~~~~l~G~~t~AD~~l 114 (170)
.|+.+++++++|+.+.. .+..... . .+. .+ .+.+.+.++.+|++|+. +++|++|++|+|||++
T Consensus 94 ~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~~l~G~~TlADi~l 171 (214)
T PRK15113 94 ADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAP--GQPNLFGEWCIADTDL 171 (214)
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhc--CCCEeeCCccHHHHHH
Confidence 24567899999998875 3332211 1 111 11 16678899999999972 4579988899999999
Q ss_pred HHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 115 APFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 115 ~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
++.+.++... +.++ .|+|.+|++|| +||++++.+++.
T Consensus 172 ~~~l~~~~~~-----~~~~---~p~l~~~~~r~~~rp~~~~~~~~~ 209 (214)
T PRK15113 172 ALMLNRLVLH-----GDEV---PERLADYATFQWQRASVQRWLALS 209 (214)
T ss_pred HHHHHHHHHc-----CCCC---CHHHHHHHHHHhcCHHHHHHHHHh
Confidence 9999876532 2222 29999999999 999999997654
No 8
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.93 E-value=2e-25 Score=166.43 Aligned_cols=148 Identities=19% Similarity=0.320 Sum_probs=112.9
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCCC---hhhHhhhcCCCCCcceEec-----CC-----------------------
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQNR---PDWYKMKVYLANKMPSLEH-----NN----------------------- 49 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~~---~~~~~~~~nP~g~vPvL~~-----~~----------------------- 49 (170)
||+|+||+++|+++ ++||.+.+++.++ +++|++ +||.|+||+|++ ||
T Consensus 9 ~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~-iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~~l~ 87 (215)
T PRK13972 9 TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLR-ISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFL 87 (215)
T ss_pred CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHh-hCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcCCCC
Confidence 68999999999999 9999999997543 578999 999999999997 23
Q ss_pred -CChHHHHHHHHHHHhhhh-hhHHHh--hhc----c-CCH-------HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHH
Q 036672 50 -EDPNKREFAEELFSYTDT-FNKTAR--SSL----E-GDG-------NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADI 112 (170)
Q Consensus 50 -~~~~~~a~~~~~~~~~~~-~~~~~~--~~~----~-~~~-------~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~ 112 (170)
.++.+++++++|+.+... +.+.+. ..+ . .+. ..+.+.|+.||++|+ +++|++|+ +|+|||
T Consensus 88 p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~Gd~~t~ADi 164 (215)
T PRK13972 88 SHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLE---NSPWLGGENYSIADI 164 (215)
T ss_pred CCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhc---cCccccCCCCCHHHH
Confidence 356788888898887643 222110 001 0 111 457788999999996 57899999 999999
Q ss_pred HHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 113 AYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 113 ~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
++++++..+... +.. ...+|+|.+|+++| +||++++++.+.
T Consensus 165 ~l~~~~~~~~~~-----~~~-~~~~P~l~~w~~r~~~rp~~~~~~~~~ 206 (215)
T PRK13972 165 ACWPWVNAWTRQ-----RID-LAMYPAVKNWHERIRSRPATGQALLKA 206 (215)
T ss_pred HHHHHHHHHhhc-----CCc-chhCHHHHHHHHHHHhCHHHHHHHHHh
Confidence 998877543321 222 36799999999999 999999986654
No 9
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.93 E-value=6.6e-25 Score=161.73 Aligned_cols=147 Identities=19% Similarity=0.293 Sum_probs=115.0
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCC----ChhhHhhhcCCCCCcceEec-CC-------------------------C
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQN----RPDWYKMKVYLANKMPSLEH-NN-------------------------E 50 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~----~~~~~~~~~nP~g~vPvL~~-~~-------------------------~ 50 (170)
++.|+||+++|+++ ++|+.+.+++.+ .+++|++ +||.|+||||++ +| .
T Consensus 8 ~s~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~-~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~~l~~p~ 86 (201)
T PRK10542 8 GACSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLA-INPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPV 86 (201)
T ss_pred cHHHHHHHHHHHHcCCCceEEEeecccccccCChHHHH-hCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcccccCCCC
Confidence 34689999999999 999999999753 3378999 999999999985 55 2
Q ss_pred ChHHHHHHHHHHHhhh-hhhHHHhhhccC---C------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHH
Q 036672 51 DPNKREFAEELFSYTD-TFNKTARSSLEG---D------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIE 119 (170)
Q Consensus 51 ~~~~~a~~~~~~~~~~-~~~~~~~~~~~~---~------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~ 119 (170)
++.+++++++|+.+.. .+...+...+.. + .+.+.+.|+.+|+.|+ +++|++|+ +|+||+++++.+.
T Consensus 87 ~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~s~ADi~l~~~~~ 163 (201)
T PRK10542 87 GSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALA---DEQWICGQRFTIADAYLFTVLR 163 (201)
T ss_pred CcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhc---CCCeeeCCCCcHHhHHHHHHHH
Confidence 4567888888888764 343333222211 1 1567888999999996 57899999 9999999999988
Q ss_pred HhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHh
Q 036672 120 RCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKK 158 (170)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~ 158 (170)
++... +.+ ...+|+|.+|+++| ++|++++++..
T Consensus 164 ~~~~~-----~~~-~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 164 WAYAV-----KLN-LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred Hhhcc-----CCC-cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 77533 233 36799999999999 99999999765
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.93 E-value=1.5e-24 Score=160.88 Aligned_cols=151 Identities=21% Similarity=0.284 Sum_probs=116.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCC-C---CChhhHhhhcCCCCCcceEecCC------------------------CC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDL-Q---NRPDWYKMKVYLANKMPSLEHNN------------------------ED 51 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~-~---~~~~~~~~~~nP~g~vPvL~~~~------------------------~~ 51 (170)
.||+|+|||++|+++ ++|+.+.++. . ..++++++ +||.|+||+|+++| .+
T Consensus 7 ~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~-~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~l~p~~ 85 (210)
T TIGR01262 7 RSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLA-LNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPPLLPAD 85 (210)
T ss_pred CCCchHHHHHHHHHCCCCceEEecccccccccCChhhhh-cCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCCCCCCC
Confidence 389999999999999 9999999986 2 24578988 89999999999987 45
Q ss_pred hHHHHHHHHHHHhhh-hhhH----HHhhhc----c-C-C------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHH
Q 036672 52 PNKREFAEELFSYTD-TFNK----TARSSL----E-G-D------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIA 113 (170)
Q Consensus 52 ~~~~a~~~~~~~~~~-~~~~----~~~~~~----~-~-~------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~ 113 (170)
+.+++++++|+.+.. .+.. .+...+ . . + .+.+.+.|+.||++|++ ++|+|++|+ +|+|||+
T Consensus 86 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~~l~G~~~T~ADi~ 164 (210)
T TIGR01262 86 PIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQP-HAGAFCVGDTPTLADLC 164 (210)
T ss_pred HHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCEeeCCCCCHHHHH
Confidence 678899999987764 2221 111111 1 1 1 14577889999999974 246799999 9999999
Q ss_pred HHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 114 YAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 114 l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
+++.+.++... +.. .++||+|++|+++| +||+++++....
T Consensus 165 ~~~~l~~~~~~-----~~~-~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 165 LVPQVYNAERF-----GVD-LTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred HHHHHHHHHHc-----CCC-cccchHHHHHHHHHhcCHHHHHhCccc
Confidence 99998876532 222 36799999999999 999999986643
No 11
>PLN02395 glutathione S-transferase
Probab=99.93 E-value=1.6e-24 Score=161.23 Aligned_cols=152 Identities=21% Similarity=0.332 Sum_probs=115.3
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecCC--------------------------CC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHNN--------------------------ED 51 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~~--------------------------~~ 51 (170)
+++++||+++|+++ ++|+.+.+++. +++++|++ +||.|+||+|+++| .|
T Consensus 10 ~~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~-~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~ 88 (215)
T PLN02395 10 FASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLA-LQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKT 88 (215)
T ss_pred cCcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHh-hCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCC
Confidence 34799999999999 99999999874 45678999 89999999999987 24
Q ss_pred hHHHHHHHHHHHhhhh-hh----HHH----hhh-c--cCC-------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHH
Q 036672 52 PNKREFAEELFSYTDT-FN----KTA----RSS-L--EGD-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLAD 111 (170)
Q Consensus 52 ~~~~a~~~~~~~~~~~-~~----~~~----~~~-~--~~~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD 111 (170)
+.+++++++|+.+.+. +. ... +.. . ..+ .+.+.+.++.||+.|+ +++|++|+ +|+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~s~AD 165 (215)
T PLN02395 89 IEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLS---KSKYLAGDFVSLAD 165 (215)
T ss_pred hhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---CCccccCCCcCHHH
Confidence 5678888888887542 21 111 111 1 111 1557788999999996 56899999 99999
Q ss_pred HHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHhhh
Q 036672 112 IAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKRF 160 (170)
Q Consensus 112 ~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~~ 160 (170)
+++++++.++.... ......+.+|+|.+|+++| ++|++++++++..
T Consensus 166 i~l~~~~~~~~~~~---~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~ 212 (215)
T PLN02395 166 LAHLPFTEYLVGPI---GKAYLIKDRKHVSAWWDDISSRPAWKEVLAKYS 212 (215)
T ss_pred HHHHHHHHHHhccc---chhhhhccCchHHHHHHHHHcChHHHHHHHHhc
Confidence 99999887763211 1112246799999999999 9999999987754
No 12
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.92 E-value=3.7e-24 Score=157.96 Aligned_cols=150 Identities=20% Similarity=0.190 Sum_probs=114.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEe-cCC------------------------CChHH
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLE-HNN------------------------EDPNK 54 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~-~~~------------------------~~~~~ 54 (170)
.||++++||++|+++ ++|+.+.++...+++++.+ +||.|+||+|+ ++| .++.+
T Consensus 8 ~s~~~~~v~~~L~~~gv~ye~~~~~~~~~~~~~~~-~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~~~ 86 (202)
T PRK10357 8 TSPFVRKISILLLEKGITFEFVNELPYNADNGVAQ-YNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAMLPRDPLA 86 (202)
T ss_pred CCchHHHHHHHHHHcCCCCeEEecCCCCCchhhhh-cCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 489999999999999 9999999987777778888 89999999998 455 45667
Q ss_pred HHHHHHHHHhhhhhhHH----Hhhh-cc---CC-------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHH
Q 036672 55 REFAEELFSYTDTFNKT----ARSS-LE---GD-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFI 118 (170)
Q Consensus 55 ~a~~~~~~~~~~~~~~~----~~~~-~~---~~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l 118 (170)
++++++|..+.+..... .... .. .+ .+.+.+.|+.||++|. +++ ++|+ +|+||+++++.+
T Consensus 87 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~---~~~-l~Gd~~t~ADi~l~~~l 162 (202)
T PRK10357 87 ALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLV---DGT-LKTDTVNLATIAIACAV 162 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhc---cCc-ccCCCcCHHHHHHHHHH
Confidence 88888887765432221 1111 11 11 1567888999999996 466 9999 999999999999
Q ss_pred HHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHh
Q 036672 119 ERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKK 158 (170)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~ 158 (170)
.++.... .+.....++|++.+|+++| +||+++++...
T Consensus 163 ~~~~~~~---~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~ 200 (202)
T PRK10357 163 GYLNFRR---VAPGWCVDRPHLVKLVENLFQRESFARTEPP 200 (202)
T ss_pred HHHHhcc---cCcchhhcChHHHHHHHHHhcChhhhhcCCC
Confidence 8775421 0112236799999999999 99999997543
No 13
>PRK11752 putative S-transferase; Provisional
Probab=99.91 E-value=1.4e-23 Score=161.06 Aligned_cols=154 Identities=16% Similarity=0.206 Sum_probs=114.9
Q ss_pred CchhHHHHHHHhc------c-cCccEEecCCCC---ChhhHhhhcCCCCCcceEecC----C------------------
Q 036672 2 CPYAQRVWITRNC------K-EKIKLVPIDLQN---RPDWYKMKVYLANKMPSLEHN----N------------------ 49 (170)
Q Consensus 2 ~P~~~rvr~~L~~------k-i~~e~~~v~~~~---~~~~~~~~~nP~g~vPvL~~~----~------------------ 49 (170)
||+|+||+++|+| + ++||.+.+++.. .+++|++ +||.|+||+|+++ |
T Consensus 52 s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~-iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~ 130 (264)
T PRK11752 52 TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVE-INPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFG 130 (264)
T ss_pred CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHh-hCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcC
Confidence 8999999999988 4 789999998743 3578999 9999999999985 2
Q ss_pred ----CChHHHHHHHHHHHhhhhhhH----HHhhhc---cC--C------HHHHHHHHHHHHhhhhcCCCCCcccCC-Cch
Q 036672 50 ----EDPNKREFAEELFSYTDTFNK----TARSSL---EG--D------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSL 109 (170)
Q Consensus 50 ----~~~~~~a~~~~~~~~~~~~~~----~~~~~~---~~--~------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~ 109 (170)
.++.+++.+++|+.+...... .+...+ .. . .+++.+.|+.+|++|+ +++|++|+ +|+
T Consensus 131 ~L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~---~~~fl~Gd~~Tl 207 (264)
T PRK11752 131 AFLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLA---EHEYIAGDEYTI 207 (264)
T ss_pred CcCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhc---cCCCCCCCccCH
Confidence 467788999999887643211 111111 11 1 1457788999999996 57899999 999
Q ss_pred HHHHHHHHHHHhhhhhh-cccccccCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 110 ADIAYAPFIERCKPFLL-EAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 110 AD~~l~~~l~~~~~~~~-~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
|||++++++.++..... ...+....+.+|++.+|+++| +||++++++..+
T Consensus 208 ADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~ 259 (264)
T PRK11752 208 ADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVN 259 (264)
T ss_pred HHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhcc
Confidence 99999998877643210 000111146799999999999 999999987655
No 14
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=3.3e-23 Score=153.96 Aligned_cols=143 Identities=27% Similarity=0.487 Sum_probs=111.5
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC--CChhhHhhhcCCCCCcceEecCC-------------------------CCh
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ--NRPDWYKMKVYLANKMPSLEHNN-------------------------EDP 52 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~--~~~~~~~~~~nP~g~vPvL~~~~-------------------------~~~ 52 (170)
.||||+||+++|.++ ++|+.+.++.. ..+++|++ +||.|+||||+++| .++
T Consensus 8 ~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~-~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~l~p~~~ 86 (211)
T COG0625 8 TSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLA-LNPLGKVPALVDDDGEVLTESGAILEYLAERYPGPPLLPADP 86 (211)
T ss_pred CCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHh-cCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCCCcCCCCc
Confidence 379999999999999 99999999986 46689999 89999999999875 244
Q ss_pred H---HHHHHHHHHHhhhh-hhHHHh----hhc---cC--------CHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHH
Q 036672 53 N---KREFAEELFSYTDT-FNKTAR----SSL---EG--------DGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADI 112 (170)
Q Consensus 53 ~---~~a~~~~~~~~~~~-~~~~~~----~~~---~~--------~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~ 112 (170)
. +|+...+|+.+... +.+.+. ... .. ..+.+...++.+|+.|+ +++|++|+ +|+||+
T Consensus 87 ~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~tiAD~ 163 (211)
T COG0625 87 LARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLA---DGPYLAGDRFTIADI 163 (211)
T ss_pred hhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhc---cCCcccCCCCCHHHH
Confidence 3 56666677777642 222221 111 01 11678889999999997 58999999 999999
Q ss_pred HHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHH
Q 036672 113 AYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFN 153 (170)
Q Consensus 113 ~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~ 153 (170)
++++.+.++... +.+. +.+|++.+|++|| ++|+++
T Consensus 164 ~~~~~~~~~~~~-----~~~~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 164 ALAPLLWRLALL-----GEEL-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHhhhc-----Cccc-ccChHHHHHHHHHHcCCchh
Confidence 999999986543 2332 7899999999999 999965
No 15
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.90 E-value=4.6e-23 Score=148.36 Aligned_cols=153 Identities=21% Similarity=0.377 Sum_probs=119.8
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC---CCh--HHHHHHHHHHH---------hhh
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN---EDP--NKREFAEELFS---------YTD 66 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~---~~~--~~~a~~~~~~~---------~~~ 66 (170)
||||||+.+.|++| ++|.+..||++.+|+||++ ++|.|++|+|..++ +|. .+....+.+-. ...
T Consensus 21 cpf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~-~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~E~a 99 (221)
T KOG1422|consen 21 CPFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLD-ISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPPESA 99 (221)
T ss_pred ChhHHHHHHHHHHcCCCceEEEeecCCCcHHHHh-hCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCHHHH
Confidence 99999999999999 9999999999999999999 99999999999987 221 11111110000 000
Q ss_pred ----hhhHHHhhhc-c-------CCHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccccc
Q 036672 67 ----TFNKTARSSL-E-------GDGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDI 133 (170)
Q Consensus 67 ----~~~~~~~~~~-~-------~~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~ 133 (170)
.+...+-..+ . +.++.+..+|.+||.+|++.+.++||.|| +|+|||.+.|-|..++....++++|++
T Consensus 100 sag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~I 179 (221)
T KOG1422|consen 100 SAGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEI 179 (221)
T ss_pred hhHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCC
Confidence 1111111111 1 12378899999999999864468999999 999999999999999988888899999
Q ss_pred CCCChHHHHHHHHh-cchHHHHH
Q 036672 134 TAGRPQLATWIEEM-KNEAFNQT 155 (170)
Q Consensus 134 ~~~~p~l~~w~~r~-~~p~~~~~ 155 (170)
+++.+++.+|+..+ ++.+|..+
T Consensus 180 P~~lt~V~rYl~~~ya~d~F~~t 202 (221)
T KOG1422|consen 180 PASLTGVWRYLKNAYARDEFTNT 202 (221)
T ss_pred chhhhHHHHHHHHHHhHHHhhcC
Confidence 99999999999999 99999877
No 16
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.87 E-value=4.8e-21 Score=141.89 Aligned_cols=151 Identities=17% Similarity=0.134 Sum_probs=105.0
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCCChhh-----Hh--hhcCCCCCcceEecCC---------------------CCh
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQNRPDW-----YK--MKVYLANKMPSLEHNN---------------------EDP 52 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~-----~~--~~~nP~g~vPvL~~~~---------------------~~~ 52 (170)
++.+++||++|+++ ++|+.+.++. .+++. ++ + +||.|+||+|++|| .+.
T Consensus 13 ~~~~~~vrl~L~~~gi~ye~~~~~~-~~~~~~~~~~~~~~~-~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~~~~~~~ 90 (205)
T PTZ00057 13 RGKAELIRLIFAYLGIEYTDKRFGE-NGDAFIEFKNFKKEK-DTPFEQVPILEMDNIIFAQSQAIVRYLSKKYKICGESE 90 (205)
T ss_pred CcchHHHHHHHHHcCCCeEEEeccc-cchHHHHHHhccccC-CCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCCCH
Confidence 67899999999999 9999997753 22221 12 4 79999999999988 122
Q ss_pred HHHHHHHHHHHhhhhhhHHHhh--hccC-----CHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhh
Q 036672 53 NKREFAEELFSYTDTFNKTARS--SLEG-----DGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPF 124 (170)
Q Consensus 53 ~~~a~~~~~~~~~~~~~~~~~~--~~~~-----~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~ 124 (170)
.+++.++.+......+...... .+.. ..+.+.+.|+.||+.|++ ++++|++|+ +|+||+++++.+.++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~~l~Gd~~T~AD~~l~~~~~~~~~~ 169 (205)
T PTZ00057 91 LNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEELPKWSGYFENILKK-NHCNYFVGDNLTYADLAVFNLYDDIETK 169 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeeCCcccHHHHHHHHHHHHHHHh
Confidence 2233333332222222211111 0111 125678889999999974 245899999 999999999998876532
Q ss_pred hhcccccccCCCChHHHHHHHHh-cchHHHHHHHhhh
Q 036672 125 LLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKRF 160 (170)
Q Consensus 125 ~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~~ 160 (170)
.+.+ .+.||+|.+|++|| ++|++++.++++.
T Consensus 170 ----~~~~-l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 170 ----YPNS-LKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred ----Chhh-hccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 1222 47899999999999 9999999998876
No 17
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=2.6e-21 Score=136.03 Aligned_cols=149 Identities=22% Similarity=0.334 Sum_probs=118.5
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCCC-h---hhHhhhcCCCCCcceEecCC------------------------CCh
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQNR-P---DWYKMKVYLANKMPSLEHNN------------------------EDP 52 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~---~~~~~~~nP~g~vPvL~~~~------------------------~~~ 52 (170)
|.=|+|||++|..| |+||.++|++-++ . .+|.+ +||.++||+|++|| +||
T Consensus 14 SSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~-iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~ppLLP~d~ 92 (217)
T KOG0868|consen 14 SSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKE-INPMEKVPTLVIDGLTLTESLAIIEYLEETYPDPPLLPKDP 92 (217)
T ss_pred ccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhh-cCchhhCCeEEECCEEeehHHHHHHHHHhcCCCCCCCCcCH
Confidence 45589999999999 9999999996433 2 58998 99999999999999 788
Q ss_pred HHHHHHHHHHHhhhh-hhH----HHhhhcc----C--C---HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHH
Q 036672 53 NKREFAEELFSYTDT-FNK----TARSSLE----G--D---GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPF 117 (170)
Q Consensus 53 ~~~a~~~~~~~~~~~-~~~----~~~~~~~----~--~---~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~ 117 (170)
..||..+++...+.+ ..+ .....++ + + ...+.+.+..||..|+. ..|.|.+|| +|+||+++.|.
T Consensus 93 ~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~-~aGkycvGDevtiADl~L~pq 171 (217)
T KOG0868|consen 93 HKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKS-HAGKYCVGDEVTIADLCLPPQ 171 (217)
T ss_pred HHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHH-ccCCcccCceeehhhhccchh
Confidence 999999988877642 221 2233332 1 1 16688999999999997 467899999 99999999999
Q ss_pred HHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHh
Q 036672 118 IERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKK 158 (170)
Q Consensus 118 l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~ 158 (170)
+.-.+.+ ..+ +..||-+.+-.+.+ ..|+|+.+-..
T Consensus 172 v~nA~rf-----~vd-l~PYPti~ri~e~l~elpaFq~ahP~ 207 (217)
T KOG0868|consen 172 VYNANRF-----HVD-LTPYPTITRINEELAELPAFQAAHPD 207 (217)
T ss_pred hhhhhhc-----ccc-CCcCchHHHHHHHHHhCHHHHhcCCC
Confidence 8876533 233 47899999999999 99999987443
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.85 E-value=1.8e-20 Score=139.00 Aligned_cols=139 Identities=17% Similarity=0.242 Sum_probs=98.8
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceE-ecCC-----------------CC----hHHHHH
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSL-EHNN-----------------ED----PNKREF 57 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL-~~~~-----------------~~----~~~~a~ 57 (170)
.||||+|||++|+++ ++|+.+.++...... -.+ +||.|+|||| .++| .+ +..++.
T Consensus 8 ~sp~~~kv~~~L~~~gi~y~~~~~~~~~~~~-~~~-~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~l~~~~~~~ 85 (210)
T PRK10387 8 HCPFCVKARMIFGLKNIPVELIVLANDDEAT-PIR-MIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKPLLTGKRSPA 85 (210)
T ss_pred CCchHHHHHHHHHHcCCCeEEEEcCCCchhh-HHH-hcCCcccceEEecCCeEecCHHHHHHHHHHhCCCccCCCcccHH
Confidence 499999999999999 999999887543222 246 7999999999 4666 11 124566
Q ss_pred HHHHHHhhhh-hhHHHhhhc------------------------cCC-----------HHHHHHHHHHHHhhhhcCCCCC
Q 036672 58 AEELFSYTDT-FNKTARSSL------------------------EGD-----------GNEARVAFHYFETPLSKFNDGP 101 (170)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~------------------------~~~-----------~~~l~~~l~~le~~L~~~~~~~ 101 (170)
+++|+.+... +...+++.+ .+. .+.+.+.|+.+|++|+ + +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~-~ 161 (210)
T PRK10387 86 IEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIV---K-P 161 (210)
T ss_pred HHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhc---C-c
Confidence 7777765532 111111000 000 1467788899999995 4 9
Q ss_pred cccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHH
Q 036672 102 FLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAF 152 (170)
Q Consensus 102 ~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~ 152 (170)
|++|+ +|+||+++++++.++... .+. +.+|++.+|++|| +||++
T Consensus 162 ~l~G~~~s~ADi~l~~~l~~~~~~----~~~---~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 162 NAVNGELSTDDIHLFPILRNLTLV----KGI---EWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred cccCCCCCHHHHHHHHHHhcceee----cCC---CCCHHHHHHHHHHHHHhCC
Confidence 99999 999999999999987643 122 2369999999999 99875
No 19
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=7.1e-20 Score=137.53 Aligned_cols=149 Identities=20% Similarity=0.363 Sum_probs=118.5
Q ss_pred CchhHHHHHHHhcc-cCccEEecCC---CCChhhHhhhcCCCCCcceEecCC--------------------------CC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDL---QNRPDWYKMKVYLANKMPSLEHNN--------------------------ED 51 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~---~~~~~~~~~~~nP~g~vPvL~~~~--------------------------~~ 51 (170)
||.|++|.+++.++ ++||.+.++. .+.+++|++ +||.|+||+|+++| .|
T Consensus 11 s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~-~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~~~l~p~~ 89 (226)
T KOG0867|consen 11 SPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLK-LNPLGKVPALEDGGLTLWESHAILRYLAEKYGPLGGILLPKD 89 (226)
T ss_pred CcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHh-cCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCCCcccCCcC
Confidence 78899999999999 9999998885 456699998 89999999999999 46
Q ss_pred hHHHHHHHHHHHhhhh-hhHHH------hh-hccC--C-------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHH
Q 036672 52 PNKREFAEELFSYTDT-FNKTA------RS-SLEG--D-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIA 113 (170)
Q Consensus 52 ~~~~a~~~~~~~~~~~-~~~~~------~~-~~~~--~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~ 113 (170)
+..+|.+++|+.+..+ +.... .+ .+.. + .+++.+.++.+|+.|. ++.|++|+ +|+||+.
T Consensus 90 ~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~---~~~yl~g~~~tlADl~ 166 (226)
T KOG0867|consen 90 LKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLK---TQVYLAGDQLTLADLS 166 (226)
T ss_pred HHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHc---cCCcccCCcccHHHHH
Confidence 6789999999987654 32221 12 1111 1 2789999999999997 57999999 9999999
Q ss_pred HHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHH
Q 036672 114 YAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYK 157 (170)
Q Consensus 114 l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~ 157 (170)
+.+.+..+.... .......++|++.+|++++ ++|+++++..
T Consensus 167 ~~~~~~~~~~~~---~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~ 208 (226)
T KOG0867|consen 167 LASTLSQFQGKF---ATEKDFEKYPKVARWYERIQKRPAYEEANE 208 (226)
T ss_pred HhhHHHHHhHhh---hhhhhhhhChHHHHHHHHHHhCccHHHHHH
Confidence 999988774211 1123457899999999999 9999998743
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.83 E-value=4.8e-20 Score=136.95 Aligned_cols=139 Identities=14% Similarity=0.226 Sum_probs=96.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEe-cCC-----------------CC----hHHHHH
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLE-HNN-----------------ED----PNKREF 57 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~-~~~-----------------~~----~~~~a~ 57 (170)
.||||+|||++|+++ ++|+.+.++.... ...++ +||.|+||+|+ ++| .. +..++.
T Consensus 7 ~sp~~~kvr~~L~~~gl~~e~~~~~~~~~-~~~~~-~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~~~~~~~~~ 84 (209)
T TIGR02182 7 HCPFCVRARMIFGLKNIPVEKHVLLNDDE-ETPIR-MIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPLLTGKVSPE 84 (209)
T ss_pred CCChHHHHHHHHHHcCCCeEEEECCCCcc-hhHHH-hcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCccCCCCChHH
Confidence 499999999999999 9999987764332 22367 89999999998 666 01 123455
Q ss_pred HHHHHHhhhhhh-HHHhhhc-----------------c-------C--------CH---HHHHHHHHHHHhhhhcCCCCC
Q 036672 58 AEELFSYTDTFN-KTARSSL-----------------E-------G--------DG---NEARVAFHYFETPLSKFNDGP 101 (170)
Q Consensus 58 ~~~~~~~~~~~~-~~~~~~~-----------------~-------~--------~~---~~l~~~l~~le~~L~~~~~~~ 101 (170)
+++|+.+..... ..+++.+ . + .. +.+.+.|+.+|++|. +++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~ 161 (209)
T TIGR02182 85 IEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLID---GPN 161 (209)
T ss_pred HHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHh---Ccc
Confidence 666665543221 1111100 0 0 01 557788999999996 688
Q ss_pred cccCCCchHHHHHHHHHHHhhhhhhcccccccCCCCh-HHHHHHHHh-cchHH
Q 036672 102 FLQGQFSLADIAYAPFIERCKPFLLEAKKYDITAGRP-QLATWIEEM-KNEAF 152 (170)
Q Consensus 102 ~l~G~~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p-~l~~w~~r~-~~p~~ 152 (170)
|++|++|+||+++++++.++.... + ..+| ++.+|++|| +|+++
T Consensus 162 ~l~g~~TiADi~l~~~l~~~~~~~----~----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 162 AVNGELSEDDILVFPLLRNLTLVA----G----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred ccCCCCCHHHHHHHHHhcCeeeec----C----CCCChHHHHHHHHHHHHhCC
Confidence 995449999999999998776421 1 1256 999999999 88764
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.81 E-value=1.4e-19 Score=134.23 Aligned_cols=79 Identities=32% Similarity=0.439 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhhhhcCC-CCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHH
Q 036672 81 NEARVAFHYFETPLSKFN-DGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYK 157 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~-~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~ 157 (170)
+++...|+.+|+.|.+.+ ...||+|+ ||+||+.+++.+.++..+.-. ..+.-..+.|++.+|++|+ +|++|++++.
T Consensus 208 d~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e-~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg 286 (325)
T KOG4420|consen 208 DELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLE-KKYWEDGSRPNLESYFERVRRRFSFRKVLG 286 (325)
T ss_pred HHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccH-HHhcccCCCccHHHHHHHHHhhhHHHHhhh
Confidence 556777888899997311 25799999 999999999999999877522 1232346899999999999 9999999977
Q ss_pred hhh
Q 036672 158 KRF 160 (170)
Q Consensus 158 ~~~ 160 (170)
..+
T Consensus 287 ~~f 289 (325)
T KOG4420|consen 287 DIF 289 (325)
T ss_pred hHH
Confidence 665
No 22
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.71 E-value=1.6e-16 Score=108.21 Aligned_cols=109 Identities=60% Similarity=0.958 Sum_probs=84.0
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHhhh-cc-CCHHHHHHHHHHHHhhhhcCCCCCcccCCCchHHHHHHHHHHHhhhhhhcc
Q 036672 51 DPNKREFAEELFSYTDTFNKTARSS-LE-GDGNEARVAFHYFETPLSKFNDGPFLQGQFSLADIAYAPFIERCKPFLLEA 128 (170)
Q Consensus 51 ~~~~~a~~~~~~~~~~~~~~~~~~~-~~-~~~~~l~~~l~~le~~L~~~~~~~~l~G~~t~AD~~l~~~l~~~~~~~~~~ 128 (170)
||.+||.+++++.+.+.+...+++. +. ...+++.+.++.||+.|+.+++++|++|.+|+|||+++|++.++.......
T Consensus 1 d~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~~~~fl~G~~tlADi~l~~~~~~~~~~~~~~ 80 (120)
T cd03203 1 DPAKREFADELLAYTDAFTKALYSSLIKGDPSAEAAAALDYIENALSKFDDGPFFLGQFSLVDIAYVPFIERFQIFLSEL 80 (120)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcCCCCCcCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 6789999999999966555555444 33 334788899999999997333578999999999999999998776432122
Q ss_pred cccccCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 129 KKYDITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 129 ~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
.++++..++|+|.+|+++| ++|+++++....
T Consensus 81 ~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 81 FNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred cCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 3555556899999999999 999999997643
No 23
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=9.6e-15 Score=107.36 Aligned_cols=152 Identities=17% Similarity=0.229 Sum_probs=116.4
Q ss_pred hhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC---------------------CChHHHHHHHHH
Q 036672 4 YAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN---------------------EDPNKREFAEEL 61 (170)
Q Consensus 4 ~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~---------------------~~~~~~a~~~~~ 61 (170)
+++-+|++++.. ++||.+.+..++.-+..+. ..|+||+|+|..+| .++.+.+.++.+
T Consensus 14 ~ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~-~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~gl~Gkt~~E~a~vD~i 92 (206)
T KOG1695|consen 14 LAEPIRLLFAYAGVSFEDKRITMEDAWEELKD-KMPFGQLPVLEVDGKKLVQSRAILRYLARKFGLAGKTEEEEAWVDMI 92 (206)
T ss_pred hHHHHHHHHHhcCCCcceeeeccccchhhhcc-cCCCCCCCEEeECCEeeccHHHHHHHHHHHhCcCCCCHHHHHHHHHH
Confidence 477899999999 9999998886553233445 37999999999998 788889999888
Q ss_pred HHhhhhhhHH-Hhhhc----cCC-H--------HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhh
Q 036672 62 FSYTDTFNKT-ARSSL----EGD-G--------NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLL 126 (170)
Q Consensus 62 ~~~~~~~~~~-~~~~~----~~~-~--------~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~ 126 (170)
.+.+..+... +.... .+. . .+....+..+++.|.. +++.|++|| +|+||+.++-.+..+....
T Consensus 93 ~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~-~~sgflvGd~lT~aDl~i~e~l~~l~~~~- 170 (206)
T KOG1695|consen 93 VDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKK-NKSGFLVGDKLTWADLVIAEHLDTLEELL- 170 (206)
T ss_pred HHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHh-CCCCeeecCcccHHHHHHHHHHHHHHHhc-
Confidence 8877665544 21111 111 1 2556788899999986 456799999 9999999999888776531
Q ss_pred cccccccCCCChHHHHHHHHh-cchHHHHHHHhhhh
Q 036672 127 EAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKRFV 161 (170)
Q Consensus 127 ~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~~~ 161 (170)
.....+.+|.|+++.+++ ++|.+++.+.+|..
T Consensus 171 ---~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r~~ 203 (206)
T KOG1695|consen 171 ---DPSALDHFPKLKAFKERVSSIPNIKKYLESRPV 203 (206)
T ss_pred ---CchhhccChHHHHHHHHHhcCchHHHHHhcCCC
Confidence 223456789999999999 99999999988764
No 24
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.64 E-value=1.5e-15 Score=103.82 Aligned_cols=106 Identities=21% Similarity=0.278 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhccC------CHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhh
Q 036672 54 KREFAEELFSYTDTFNKTARSSLEG------DGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLL 126 (170)
Q Consensus 54 ~~a~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~ 126 (170)
+||+.+.|+.+++++...++..+.. ..+.+.+.|+.+|+.|++ ++++|++|+ +|+||++++|++.++.....
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~ 80 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLLGAPSDREEKKAELRSALENLEEELTK-RGTPFFGGDSPGMVDYMIWPWFERLEALKL 80 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHHhccccchhhHHHHHHHHHHHHHHHHh-cCCCCcCCCCccHHHHHhhHHHHHHHHHHh
Confidence 5899999999998777766554431 127788999999999973 247999999 99999999999988765431
Q ss_pred cccccccCCCChHHHHHHHHh-cchHHHHHHHhhh
Q 036672 127 EAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKRF 160 (170)
Q Consensus 127 ~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~~ 160 (170)
..+.....+++|+|++|+++| ++|+++.++..+-
T Consensus 81 ~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~ 115 (124)
T cd03184 81 LLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTE 115 (124)
T ss_pred hccccCCcccChHHHHHHHHhccChHHHHHhCCHH
Confidence 111111247899999999999 9999999977654
No 25
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.64 E-value=4e-15 Score=99.00 Aligned_cols=96 Identities=18% Similarity=0.338 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHhhhh-hhHHHhhhcc--CC-----HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhh
Q 036672 52 PNKREFAEELFSYTDT-FNKTARSSLE--GD-----GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCK 122 (170)
Q Consensus 52 ~~~~a~~~~~~~~~~~-~~~~~~~~~~--~~-----~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~ 122 (170)
|.+|++.++|+.+++. +.+.+...+. ++ .+.+.+.|+.+|++|+ +++|++|+ +|+|||++++.+.++.
T Consensus 1 p~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~t~aDi~~~~~~~~~~ 77 (107)
T cd03186 1 PVARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFA---HKPYFMSEEFSLVDCALAPLLWRLP 77 (107)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHc---CCCcccCCCCcHHHHHHHHHHHHHH
Confidence 5689999999999865 4444333221 11 1678889999999996 68999999 9999999999986655
Q ss_pred hhhhcccccccCCCChHHHHHHHHh-cchHHHHH
Q 036672 123 PFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQT 155 (170)
Q Consensus 123 ~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~ 155 (170)
.. +.++...+|++++|+++| +||+++++
T Consensus 78 ~~-----~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 78 AL-----GIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred Hc-----CCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 22 444445799999999999 99999875
No 26
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.62 E-value=6.6e-16 Score=99.51 Aligned_cols=48 Identities=23% Similarity=0.415 Sum_probs=46.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||||+|++|++| ++|+++.+|+.++|+||++ +||.|+||+|+++|
T Consensus 21 ~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~-~nP~g~vPvL~~~~ 69 (91)
T cd03061 21 NCPFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKD-LAPGTQPPFLLYNG 69 (91)
T ss_pred CChhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHH-hCCCCCCCEEEECC
Confidence 599999999999999 9999999999999999999 99999999999988
No 27
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.56 E-value=4.8e-14 Score=95.30 Aligned_cols=100 Identities=22% Similarity=0.325 Sum_probs=75.6
Q ss_pred CChHHHHHHHHHHHhhhh-hhHHHhhhc-----cC-CH----HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHH
Q 036672 50 EDPNKREFAEELFSYTDT-FNKTARSSL-----EG-DG----NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPF 117 (170)
Q Consensus 50 ~~~~~~a~~~~~~~~~~~-~~~~~~~~~-----~~-~~----~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~ 117 (170)
+||..++.+++|+.+.+. +.+.+.... .. +. +.+.+.|+.+|+.|+ +++|++|+ +|+|||+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~---~~~yl~Gd~~tlADi~l~~~ 78 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQ---QHSYLLGDKPSLADWAIFPF 78 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHc---cCCccCCCCccHHHHHHHHH
Confidence 478999999999999864 444432211 11 11 678899999999996 57899999 99999999998
Q ss_pred HHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHH
Q 036672 118 IERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQT 155 (170)
Q Consensus 118 l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~ 155 (170)
+.++.... .......++|+|.+|+++| ++|+++++
T Consensus 79 l~~~~~~~---~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 79 VRQFAHVD---PKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHhh---hcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 87664321 1111247899999999999 99999875
No 28
>PLN02907 glutamate-tRNA ligase
Probab=99.56 E-value=6.5e-14 Score=119.85 Aligned_cols=119 Identities=19% Similarity=0.300 Sum_probs=89.6
Q ss_pred hHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEec-CC------------------------CChHHHHHH
Q 036672 5 AQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEH-NN------------------------EDPNKREFA 58 (170)
Q Consensus 5 ~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~-~~------------------------~~~~~~a~~ 58 (170)
+.++.++|++. ++|+.+. .+|.|+||+|++ +| .++.+++.+
T Consensus 13 ~~~v~~~L~~lgv~~e~~~-------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~L~p~d~~erAqV 79 (722)
T PLN02907 13 PLAVIAAAKVAGVPLTIDP-------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLPGFYGQDAFESSQV 79 (722)
T ss_pred hHHHHHHHHHcCCCcEEee-------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCcCCCCCCHHHHHHH
Confidence 55789999999 9999863 279999999996 45 245667777
Q ss_pred HHHHHhhhhhhHHHhhhccCCHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCC
Q 036672 59 EELFSYTDTFNKTARSSLEGDGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGR 137 (170)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~ 137 (170)
++|+.+...+. ....+.+.++.||++|+ +++||+|+ +|+||+++++.+....... ........|
T Consensus 80 ~qWL~~~~~~~---------~~~~l~~~L~~LE~~L~---~rtYLvGd~lTLADIaL~~~L~~~~~~~---~~~~~~~~y 144 (722)
T PLN02907 80 DEWLDYAPTFS---------SGSEFENACEYVDGYLA---SRTFLVGYSLTIADIAIWSGLAGSGQRW---ESLRKSKKY 144 (722)
T ss_pred HHHHHHHhhcc---------cHHHHHHHHHHHHHHhc---cCCeecCCCCCHHHHHHHHHHHhhhhhh---hcccccccC
Confidence 77777664321 12356778999999996 67899999 9999999998876542110 111224689
Q ss_pred hHHHHHHHHh-cchH
Q 036672 138 PQLATWIEEM-KNEA 151 (170)
Q Consensus 138 p~l~~w~~r~-~~p~ 151 (170)
|+|.+|+++| ++|+
T Consensus 145 PnL~RW~erI~arPs 159 (722)
T PLN02907 145 QNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHhCCC
Confidence 9999999999 9999
No 29
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.54 E-value=4.6e-14 Score=96.20 Aligned_cols=76 Identities=20% Similarity=0.381 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHh
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKK 158 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~ 158 (170)
+++.+.|..||.+|+. +++|++|| +|+|||+++|++.++........++.+.+.+|+|.+|++|| +||+|+++...
T Consensus 33 ~~l~~~l~~Le~~L~~--~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~~~ 110 (121)
T cd03201 33 QALLDELEALEDHLKE--NGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTKAE 110 (121)
T ss_pred HHHHHHHHHHHHHHhc--CCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcCCC
Confidence 6788899999999972 47999999 99999999998888764322222444457899999999999 99999998553
No 30
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.53 E-value=1.2e-13 Score=93.97 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhcc-CC--------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhh
Q 036672 54 KREFAEELFSYTDTFNKTARSSLE-GD--------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKP 123 (170)
Q Consensus 54 ~~a~~~~~~~~~~~~~~~~~~~~~-~~--------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~ 123 (170)
+++++++++..+..+...+...+. .+ .+.+.+.++.||++|+ +++|++|+ +|+||+++++.+.++..
T Consensus 2 e~~~id~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~T~aDi~l~~~~~~~~~ 78 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMGLARICYSPDFEKLKPDYLAKLPDKLKLFSDFLG---DRPWFAGDKITYVDFLLYEALDQHRI 78 (121)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHHHHhC---CCCCcCCCCccHHHHHHHHHHHHHHH
Confidence 467888888887766655544321 11 1567788999999996 56899999 99999999999988764
Q ss_pred hhhcccccccCCCChHHHHHHHHh-cchHHHHHHHhhh
Q 036672 124 FLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKRF 160 (170)
Q Consensus 124 ~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~~ 160 (170)
. .....+.+|+|.+|++|| ++|++++.++++.
T Consensus 79 ~-----~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~ 111 (121)
T cd03209 79 F-----EPDCLDAFPNLKDFLERFEALPKISAYMKSDR 111 (121)
T ss_pred h-----CccccccChHHHHHHHHHHHCHHHHHHHhccc
Confidence 3 122346899999999999 9999999988764
No 31
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.53 E-value=6.2e-14 Score=96.74 Aligned_cols=79 Identities=20% Similarity=0.306 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHhhhhcC-------------CCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHH
Q 036672 81 NEARVAFHYFETPLSKF-------------NDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEE 146 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~-------------~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r 146 (170)
+.+...|+.||++|+.. ++++|++|+ +|+|||+++|.+.++........++.+...+|+|.+|++|
T Consensus 32 ~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P~L~aw~~r 111 (134)
T cd03198 32 KGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLTGLWRYLKN 111 (134)
T ss_pred HHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCHHHHHHHHH
Confidence 77899999999999731 126799999 9999999999998876543222355555789999999999
Q ss_pred h-cchHHHHHHHhh
Q 036672 147 M-KNEAFNQTYKKR 159 (170)
Q Consensus 147 ~-~~p~~~~~~~~~ 159 (170)
| +||+++++....
T Consensus 112 i~aRPsfk~t~~~~ 125 (134)
T cd03198 112 AYQREEFTNTCPAD 125 (134)
T ss_pred HHCCHHHHHHcCCH
Confidence 9 999999986543
No 32
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.52 E-value=7e-14 Score=97.89 Aligned_cols=104 Identities=19% Similarity=0.203 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhhh-hhhHHHhhhc-cCC-------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhh
Q 036672 53 NKREFAEELFSYTD-TFNKTARSSL-EGD-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCK 122 (170)
Q Consensus 53 ~~~a~~~~~~~~~~-~~~~~~~~~~-~~~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~ 122 (170)
..|+.+++|++|.. .+.+.++... ..+ .+.+.+.|+.||++|+ +++|++|+ +|+|||++++++.++.
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~---~~~yl~Gd~~TlADi~l~~~l~~~~ 79 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLS---DRRYLLGDRLTEADIRLFTTLIRFD 79 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHc---cCCeeeCCCccHHHHHHHHHHHHHH
Confidence 35788999999986 4445444432 211 1678889999999996 67899999 9999999999988764
Q ss_pred hhhhc-c-cccccCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 123 PFLLE-A-KKYDITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 123 ~~~~~-~-~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
..... . .+.....++|+|.+|+++| ++|+++++....
T Consensus 80 ~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~ 119 (142)
T cd03190 80 AVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFD 119 (142)
T ss_pred HHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHH
Confidence 32110 0 0122346899999999999 999999986553
No 33
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.52 E-value=1.2e-13 Score=94.35 Aligned_cols=104 Identities=26% Similarity=0.409 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHHhhhh-hhHHHhhhcc--C-----CHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhh
Q 036672 52 PNKREFAEELFSYTDT-FNKTARSSLE--G-----DGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCK 122 (170)
Q Consensus 52 ~~~~a~~~~~~~~~~~-~~~~~~~~~~--~-----~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~ 122 (170)
|.+|++.++|+.+.+. +.+.+...+. . ..+.+.+.++.+|+.|+ +++|++|+ +|+|||++++++.++.
T Consensus 1 p~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~t~ADi~l~~~~~~~~ 77 (126)
T cd03185 1 PYERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELG---GKPFFGGDTIGYVDIALGSFLGWFR 77 (126)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhc---CCCCCCCCCcchHHHHHHHHHHHHH
Confidence 4678999999998863 4444322221 1 12678889999999996 57999999 9999999999998876
Q ss_pred hhhhcccccc--cCCCChHHHHHHHHh-cchHHHHHHHhh
Q 036672 123 PFLLEAKKYD--ITAGRPQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 123 ~~~~~~~~~~--~~~~~p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
.... ..+.+ ....+|++.+|+++| ++|++++++...
T Consensus 78 ~~~~-~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 116 (126)
T cd03185 78 AYEE-VGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDR 116 (126)
T ss_pred HHHH-HcCccccCcccCchHHHHHHHHHhccHHHHhCCCH
Confidence 4321 11222 136799999999999 999999985543
No 34
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.51 E-value=2.4e-13 Score=93.25 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=75.2
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhccC--------CHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhh
Q 036672 54 KREFAEELFSYTDTFNKTARSSLEG--------DGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPF 124 (170)
Q Consensus 54 ~~a~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~ 124 (170)
++++++++...+..+...+...+.. -.+.+.+.|..||+.|++.++++|++|+ +|+||+++++.+.++...
T Consensus 3 e~~~vd~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~ 82 (126)
T cd03210 3 EAALIDMVNDGVEDLRLKYVRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL 82 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh
Confidence 5677788777766555444332210 0155778899999999741146899999 999999999999887643
Q ss_pred hhcccccccCCCChHHHHHHHHh-cchHHHHHHHhhh
Q 036672 125 LLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKRF 160 (170)
Q Consensus 125 ~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~~ 160 (170)
. ....+.+|+|.+|++|| ++|++++++..+.
T Consensus 83 ~-----~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 83 A-----PGCLDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred C-----hHhhhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 1 12357899999999999 9999999987664
No 35
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.49 E-value=4.8e-13 Score=93.13 Aligned_cols=101 Identities=16% Similarity=0.157 Sum_probs=75.3
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhc--cC-CH---------HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHH
Q 036672 54 KREFAEELFSYTDTFNKTARSSL--EG-DG---------NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIER 120 (170)
Q Consensus 54 ~~a~~~~~~~~~~~~~~~~~~~~--~~-~~---------~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~ 120 (170)
+++++++++..+..+...++... .. +. +.+.+.|+.||+.|++ ++++|++|+ +|+||+++++.+.+
T Consensus 3 e~a~iD~i~~~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~-~~~~~l~G~~~T~ADi~l~~~l~~ 81 (137)
T cd03208 3 ERALIDMYVEGTADLMEMILMLPFLPPEEKEAKLALIKEKAKNRYFPVFEKVLKS-HGQDFLVGNKLSRADIHLLEAILM 81 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeeCCCCCHHHHHHHHHHHH
Confidence 56778888877766555443332 11 11 3457889999999963 256899999 99999999999988
Q ss_pred hhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHhhh
Q 036672 121 CKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKKRF 160 (170)
Q Consensus 121 ~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~~~ 160 (170)
+... .......+|+|.+|++|| ++|++++.++++.
T Consensus 82 ~~~~-----~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 82 VEEL-----DPSLLSDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHHh-----chhhhccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 7643 122357899999999999 9999999987654
No 36
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=9.1e-14 Score=104.35 Aligned_cols=83 Identities=20% Similarity=0.331 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccccc--CCCChHHHHHHHHh-cchHHHHHH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDI--TAGRPQLATWIEEM-KNEAFNQTY 156 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~--~~~~p~l~~w~~r~-~~p~~~~~~ 156 (170)
+++.++|++||+.|+ ++.|++|| +|-||+-|++.+-+++.....+..+.+ ..+||+|..|...+ +.|.+..|.
T Consensus 208 ~~lF~~Ld~lE~~L~---~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~ 284 (324)
T COG0435 208 KKLFEALDKLEQILS---ERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETV 284 (324)
T ss_pred HHHHHHHHHHHHHhh---cCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCccccccc
Confidence 678899999999997 68999999 999999999999999887644445543 24699999999999 999999996
Q ss_pred HhhhhcceEE
Q 036672 157 KKRFVVFTIY 166 (170)
Q Consensus 157 ~~~~~~~~~~ 166 (170)
.=.....++|
T Consensus 285 df~hIK~hYy 294 (324)
T COG0435 285 DFDHIKLHYY 294 (324)
T ss_pred chhHhhhhhe
Confidence 5555444443
No 37
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.46 E-value=4.7e-13 Score=90.88 Aligned_cols=100 Identities=25% Similarity=0.288 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHhhh-hhhHH----Hhhhc-c--CC-H--------HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHH
Q 036672 52 PNKREFAEELFSYTD-TFNKT----ARSSL-E--GD-G--------NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIA 113 (170)
Q Consensus 52 ~~~~a~~~~~~~~~~-~~~~~----~~~~~-~--~~-~--------~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~ 113 (170)
|.+++.+++|+.+.. .+.+. ++..+ . +. . +.+.+.|+.+|++|+. ++++|++|+ +|+|||+
T Consensus 1 p~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~~l~G~~~t~ADi~ 79 (121)
T cd03191 1 PKKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQ-TAGKFCFGDEPTLADIC 79 (121)
T ss_pred ChhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeecCCcCCHHHHH
Confidence 567899999999985 33321 12111 1 11 1 4578889999999973 135799999 9999999
Q ss_pred HHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHh
Q 036672 114 YAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKK 158 (170)
Q Consensus 114 l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~ 158 (170)
+++.+.++... +.+ .+.+|+|.+|++++ ++|+++++...
T Consensus 80 ~~~~~~~~~~~-----~~~-~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 80 LVPQVYNARRF-----GVD-LSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHh-----CCC-cccCcHHHHHHHHHHhChhHHHhCcC
Confidence 99998876532 333 37899999999999 99999998654
No 38
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.46 E-value=6.7e-13 Score=89.45 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=71.1
Q ss_pred ChHHHHHHHHHHHhhh-hhhHHHhhhc-------c----C--C-------HHHHHHHHHHHHhhhhcCCCCCcccCC-Cc
Q 036672 51 DPNKREFAEELFSYTD-TFNKTARSSL-------E----G--D-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FS 108 (170)
Q Consensus 51 ~~~~~a~~~~~~~~~~-~~~~~~~~~~-------~----~--~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t 108 (170)
||.+++.+++|+.+.+ .+.+.+...+ + + + .+.+.+.|+.||+.|+ +++|++|+ +|
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~---~~~~l~gd~~t 77 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLA---GSPYVAGDRFT 77 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhc---CCCcccCCCCC
Confidence 5788999999999864 4443321111 1 1 1 1567888999999996 56899999 99
Q ss_pred hHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHH
Q 036672 109 LADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAF 152 (170)
Q Consensus 109 ~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~ 152 (170)
+|||++++.+.++... +.++...+|+|.+|++++ ++|++
T Consensus 78 ~aDi~l~~~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 78 IADITAFVGLDFAKVV-----KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHHhHHHHhc-----CCCCccccHHHHHHHHHHHhccCC
Confidence 9999999999887643 344446899999999999 99974
No 39
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.43 E-value=7.8e-13 Score=88.52 Aligned_cols=93 Identities=19% Similarity=0.373 Sum_probs=70.1
Q ss_pred HHHHHHHHHHhhhh-hhHHHhhhc------cC----C------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHH
Q 036672 54 KREFAEELFSYTDT-FNKTARSSL------EG----D------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYA 115 (170)
Q Consensus 54 ~~a~~~~~~~~~~~-~~~~~~~~~------~~----~------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~ 115 (170)
+|+.+++|+.+.++ +.+.+.... .+ + .+.+.+.++.+|+.|+ +++|++|+ +|+|||+++
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~---~~~~l~G~~~t~aDi~~~ 78 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLA---GGPYLLGDRFSVADAYLF 78 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhc---CCCeeeCCCcchHHHHHH
Confidence 57899999999853 444332111 00 1 1567888999999996 67899999 999999999
Q ss_pred HHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHH
Q 036672 116 PFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQT 155 (170)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~ 155 (170)
+.+.++... +.+ ..++|++.+|+++| ++|+++++
T Consensus 79 ~~~~~~~~~-----~~~-~~~~p~l~~w~~~~~~~p~~k~~ 113 (114)
T cd03188 79 VVLRWAPGV-----GLD-LSDWPNLAAYLARVAARPAVQAA 113 (114)
T ss_pred HHHHHHhhc-----CCC-hhhChHHHHHHHHHHhCHHhHhh
Confidence 998876532 222 35799999999999 99999875
No 40
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.42 E-value=3.3e-13 Score=83.37 Aligned_cols=47 Identities=23% Similarity=0.367 Sum_probs=44.2
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
+||||+|++++|+++ ++|+.+.++..++++++++ +||.|+||+|+++
T Consensus 8 ~~p~~~rv~~~L~~~gl~~e~~~v~~~~~~~~~~~-~np~~~vP~L~~~ 55 (71)
T cd03060 8 RCPYAMRARMALLLAGITVELREVELKNKPAEMLA-ASPKGTVPVLVLG 55 (71)
T ss_pred CCcHHHHHHHHHHHcCCCcEEEEeCCCCCCHHHHH-HCCCCCCCEEEEC
Confidence 599999999999999 9999999998877789998 8999999999986
No 41
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.41 E-value=1.1e-12 Score=85.09 Aligned_cols=62 Identities=27% Similarity=0.504 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccC-CCChHHHHHHHHh-cch
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDIT-AGRPQLATWIEEM-KNE 150 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~-~~~p~l~~w~~r~-~~p 150 (170)
.++.+.|+.+|+.|+ +++|++|+ +|+||+++++++.++.... .... +++|+|.+|++|| +||
T Consensus 31 ~~~~~~l~~le~~l~---~~~~l~G~~~t~ADi~~~~~~~~~~~~~-----~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 31 AKVPRYLEVLEKRLK---GGPYLVGDKLTIADIALFPMLDWLERLG-----PDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHH---TSSSSSBSS-CHHHHHHHHHHHHHHHHT-----TTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHc---CCCeeeccCCchhHHHHHHHHHHHHHhC-----CCcccccCHHHHHHHHHHHcCC
Confidence 678889999999997 78999999 9999999999999988662 3333 7899999999999 998
No 42
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.39 E-value=5.4e-12 Score=85.07 Aligned_cols=96 Identities=15% Similarity=0.166 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHhhhh-hhHHH--h--hh-cc-C----C----HHHHHHHHHHHHhhhhcCCCCCcccCCCchHHHHHHH
Q 036672 52 PNKREFAEELFSYTDT-FNKTA--R--SS-LE-G----D----GNEARVAFHYFETPLSKFNDGPFLQGQFSLADIAYAP 116 (170)
Q Consensus 52 ~~~~a~~~~~~~~~~~-~~~~~--~--~~-~~-~----~----~~~l~~~l~~le~~L~~~~~~~~l~G~~t~AD~~l~~ 116 (170)
|.++++.++|+.++.+ +.+.. . .. +. . . .+.+.+.++.+|.+|+ ++++|++|++|+||+++++
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~--~~~~~l~G~fSiAD~~l~~ 78 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLP--PGAANLFGEWCIADTDLAL 78 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCcccCCccHHHHHHHH
Confidence 5678999999999864 44321 1 11 11 1 1 1566788889999996 2558999999999999999
Q ss_pred HHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHH
Q 036672 117 FIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYK 157 (170)
Q Consensus 117 ~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~ 157 (170)
.+.|+... +.++ + |++.+|.+|| +||++++.++
T Consensus 79 ~~~~~~~~-----g~~l-~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 79 MLNRLVLN-----GDPV-P--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHHc-----CCCC-C--HHHHHHHHHHHCCHHHHHHHh
Confidence 99988754 4554 3 9999999999 9999999864
No 43
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.38 E-value=1.9e-12 Score=85.49 Aligned_cols=67 Identities=22% Similarity=0.431 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYK 157 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~ 157 (170)
.++.+.++.+|++|+ +++|++|+ +|+|||++++.+.++... + ....+|+|.+|+++| ++|+++++..
T Consensus 33 ~~~~~~l~~le~~l~---~~~~l~g~~~t~aDi~~~~~~~~~~~~-----~--~~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 33 GSYDDVLAALEQALA---KGPYLLGERFTAADVLVGSPLGWGLQF-----G--LLPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred hhHHHHHHHHHHHHc---cCCcccCCccCHHHHHHHHHHHHHHHc-----C--CCCCChHHHHHHHHHHcCHHHHHHhc
Confidence 678999999999997 57899999 999999999999887532 2 236799999999999 9999998865
No 44
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.38 E-value=5.2e-13 Score=82.33 Aligned_cols=47 Identities=23% Similarity=0.368 Sum_probs=39.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCC----CCChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDL----QNRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~----~~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
|||||+|++++|+++ ++|++..++. ..++++|.+ +||.|+||+|+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~-~~p~~~VP~L~~~ 52 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLA-LNPRGKVPVLVDP 52 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHH-HSTT-SSSEEEET
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhc-cCcCeEEEEEEEC
Confidence 799999999999999 9999988843 334478999 9999999999984
No 45
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.38 E-value=1.3e-12 Score=88.05 Aligned_cols=68 Identities=22% Similarity=0.514 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQT 155 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~ 155 (170)
+.+.+.++.||++|+ +++|++|+ +|+|||++++++.++... ......+++|++.+|+++| ++|+++++
T Consensus 48 ~~~~~~l~~le~~L~---~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 117 (118)
T cd03187 48 EKLKKVLDVYEARLS---KSKYLAGDSFTLADLSHLPYLQYLMAT----PFAKLFDSRPHVKAWWEDISARPAWKKV 117 (118)
T ss_pred HHHHHHHHHHHHHcc---cCcccCCCCccHHHHHHHHHHHHHHHc----cchhhhhcCchHHHHHHHHHhCHHHHhh
Confidence 567888999999996 67899999 999999999998887532 1112246799999999999 99999876
No 46
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.37 E-value=3.1e-12 Score=96.42 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM 147 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~ 147 (170)
+.+.++.+.+-+.|. .+++|++|+ |++||+.+++.|..+.... .++-.-...+|..|+-+|
T Consensus 291 e~lydA~d~Wvaalg--knr~flGG~kPnLaDLsvfGvl~sm~gc~----afkd~~q~t~I~eW~~rm 352 (370)
T KOG3029|consen 291 EHLYDAADQWVAALG--KNRPFLGGKKPNLADLSVFGVLRSMEGCQ----AFKDCLQNTSIGEWYYRM 352 (370)
T ss_pred HHHHHHHHHHHHHhC--CCCCccCCCCCchhhhhhhhhhhHhhhhh----HHHHHHhcchHHHHHHHH
Confidence 345555666666665 378999999 9999999999999877552 332122457999999998
No 47
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.37 E-value=3e-12 Score=87.49 Aligned_cols=72 Identities=29% Similarity=0.507 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-c--chHHHHHH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-K--NEAFNQTY 156 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~--~p~~~~~~ 156 (170)
+.+.+.++.+|+.|. ++++|++|+ +|+|||++++.+.++... +.+..+++|+|.+|+++| + ||+++++.
T Consensus 48 ~~~~~~l~~le~~l~--~~~~~l~Gd~~t~ADi~l~~~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 48 ENLEESLDLLENYFL--KDKPFLAGDEISIADLSAVCEIMQPEAA-----GYDVFEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHHHHHHHHHh--cCCCcccCCCCCHHHHHHHHHHHHHHhc-----CCcccccCchHHHHHHHHHHhcchhHHHHH
Confidence 567888999999854 256899999 999999999988776532 333457899999999999 9 99999987
Q ss_pred Hhh
Q 036672 157 KKR 159 (170)
Q Consensus 157 ~~~ 159 (170)
+..
T Consensus 121 ~~~ 123 (126)
T cd03183 121 KII 123 (126)
T ss_pred HHH
Confidence 543
No 48
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.37 E-value=6.1e-12 Score=85.10 Aligned_cols=97 Identities=18% Similarity=0.403 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhhh-hhhHHH----hhhc-cC-C-----HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHH
Q 036672 54 KREFAEELFSYTD-TFNKTA----RSSL-EG-D-----GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIER 120 (170)
Q Consensus 54 ~~a~~~~~~~~~~-~~~~~~----~~~~-~~-~-----~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~ 120 (170)
+++++.+|+.+.. .+.+.+ ++.. .. . ..++.+.|+.||++|+ +++|++|+ +|+||+++++++.+
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~s~aDi~l~~~~~~ 78 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLE---GSDYVAGDQLTIADLSLVATVST 78 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHc---cCCeeCCCCcCHHHHHHHHHHHH
Confidence 4778888888774 333322 2211 11 1 1678899999999996 57899999 99999999999998
Q ss_pred hhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHh
Q 036672 121 CKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKK 158 (170)
Q Consensus 121 ~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~ 158 (170)
+... .+.+ ...+|+|.+|+++| ++|++++...+
T Consensus 79 ~~~~----~~~~-~~~~p~l~~w~~~~~~~p~~~~~~~~ 112 (118)
T cd03177 79 LEAL----LPLD-LSKYPNVRAWLERLKALPPYEEANGK 112 (118)
T ss_pred HHHh----cCCC-hhhCchHHHHHHHHHcccchHHHHHH
Confidence 7641 1333 35799999999999 99999987543
No 49
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.36 E-value=1e-11 Score=83.92 Aligned_cols=92 Identities=15% Similarity=0.226 Sum_probs=68.7
Q ss_pred CChHHHHHHHHHHHhhhh-hhHHHh-----hhccC----------CH-------HHHHHHHHHHHhhhhcCCCCCcccCC
Q 036672 50 EDPNKREFAEELFSYTDT-FNKTAR-----SSLEG----------DG-------NEARVAFHYFETPLSKFNDGPFLQGQ 106 (170)
Q Consensus 50 ~~~~~~a~~~~~~~~~~~-~~~~~~-----~~~~~----------~~-------~~l~~~l~~le~~L~~~~~~~~l~G~ 106 (170)
.++.+++++++|+.+.+. +.+.+. ..+.. +. ..+.+.|+.||++|+ +++|++|+
T Consensus 3 ~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~Gd 79 (119)
T cd03189 3 PDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLA---KKGYFVGD 79 (119)
T ss_pred CCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHc---cCCCCCCC
Confidence 467899999999998753 433321 11111 01 467888999999996 67899999
Q ss_pred -CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cch
Q 036672 107 -FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNE 150 (170)
Q Consensus 107 -~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p 150 (170)
+|+|||++++.+.++... +. ..+.+|++.+|++++ ++|
T Consensus 80 ~~t~ADi~l~~~~~~~~~~-----~~-~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 80 KLTAADIMMSFPLEAALAR-----GP-LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CCCHHHHHHHHHHHHHHHc-----Cc-ccccCchHHHHHHHHhcCC
Confidence 999999999988877532 22 347899999999999 886
No 50
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.36 E-value=1.1e-12 Score=81.51 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=43.0
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|+|||++|+++ ++|+.+.++.. .++++|++ +||.|+||+|+++|
T Consensus 8 ~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~-inP~g~vP~L~~~g 59 (73)
T cd03052 8 QSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMR-LNPTGEVPVLIHGD 59 (73)
T ss_pred CCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHH-hCcCCCCCEEEECC
Confidence 389999999999999 99999999863 45678999 99999999999887
No 51
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.34 E-value=6.7e-12 Score=85.26 Aligned_cols=99 Identities=17% Similarity=0.252 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhhhh-hhHHH----hhhcc---CC-------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHH
Q 036672 54 KREFAEELFSYTDT-FNKTA----RSSLE---GD-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPF 117 (170)
Q Consensus 54 ~~a~~~~~~~~~~~-~~~~~----~~~~~---~~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~ 117 (170)
+++.+++|+.+.+. +.+.+ ..... .+ .+.+.+.|+.+|+.|+ +++|++|+ +|+||+++++.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~---~~~~l~G~~~siaDi~l~~~ 77 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLL---KRTYLVGERLTLADIFVAGA 77 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHc---cCceeccCCccHHHHHHHHH
Confidence 36788899988753 33332 11111 11 1567888999999996 57899999 99999999999
Q ss_pred HHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHHh
Q 036672 118 IERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYKK 158 (170)
Q Consensus 118 l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~~ 158 (170)
+.++.... .+......+|++.+|++++ ++|++++++.+
T Consensus 78 ~~~~~~~~---~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 116 (123)
T cd03181 78 LLLGFTYV---FDKEWRAKYPNVTRWFNTVVNQPIFKAVFGE 116 (123)
T ss_pred HHHHHHHH---cCHHHHHhChHHHHHHHHHHcCHHHHHHcCC
Confidence 98864321 1122236789999999999 99999998654
No 52
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.34 E-value=1e-12 Score=82.05 Aligned_cols=48 Identities=25% Similarity=0.389 Sum_probs=45.1
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||+|||++|+++ ++|+.+.++...+++++++ +||.|+||+|+++|
T Consensus 6 ~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~~~~~~~-~~p~~~vPvL~~~g 54 (75)
T PF13417_consen 6 GSPYSQKVRLALEEKGIPYELVPVDPEEKRPEFLK-LNPKGKVPVLVDDG 54 (75)
T ss_dssp TSHHHHHHHHHHHHHTEEEEEEEEBTTSTSHHHHH-HSTTSBSSEEEETT
T ss_pred CChHHHHHHHHHHHcCCeEEEeccCcccchhHHHh-hcccccceEEEECC
Confidence 599999999999999 9999999998777889999 89999999999887
No 53
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.34 E-value=3.2e-12 Score=78.33 Aligned_cols=60 Identities=40% Similarity=0.648 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEE 146 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r 146 (170)
+.+.+.|+.||++|+ +++|++|+ ||+|||+++|++.++.... .+..+...+|+|.+|++|
T Consensus 9 ~~~~~~l~~le~~L~---~~~fl~G~~~s~aD~~l~~~l~~~~~~~---~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 9 AQLEAALDALEDHLA---DGPFLFGDRPSLADIALAPFLWRLRFVG---PDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHT---TSSBTTBSS--HHHHHHHHHHHHHHHCT---HTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---hCCCCCCCCCCHHHHHHHHHHHHHHHhC---cCcCccccCHHHHHHHhC
Confidence 678889999999997 67799999 9999999999999988763 223445889999999987
No 54
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.32 E-value=2.7e-12 Score=85.95 Aligned_cols=95 Identities=20% Similarity=0.317 Sum_probs=70.7
Q ss_pred HHHHHHHHHHhhhh-hhHHH-----hhhcc--CCH-------HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHH
Q 036672 54 KREFAEELFSYTDT-FNKTA-----RSSLE--GDG-------NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPF 117 (170)
Q Consensus 54 ~~a~~~~~~~~~~~-~~~~~-----~~~~~--~~~-------~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~ 117 (170)
+++.+++|+.+.+. +.+.+ ...+. .++ +.+.+.++.+|+.|+ +++|++|+ +|+|||++++.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~t~aDi~l~~~ 77 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLA---GRDYLAGDEYSIADIAIFPW 77 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHc---cCCcccCCCCCeeeeeHHHH
Confidence 36888999988753 33221 11111 111 667889999999996 67899999 99999999999
Q ss_pred HHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHH
Q 036672 118 IERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTY 156 (170)
Q Consensus 118 l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~ 156 (170)
+.++... +......+|++.+|+++| ++|+++++.
T Consensus 78 ~~~~~~~-----~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 78 VRRLEWI-----GIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHHhc-----cccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 9887543 222346799999999999 999999864
No 55
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=1.5e-12 Score=97.11 Aligned_cols=79 Identities=27% Similarity=0.326 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccc---cCCCChHHHHHHHHh-c-chHHHH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYD---ITAGRPQLATWIEEM-K-NEAFNQ 154 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~---~~~~~p~l~~w~~r~-~-~p~~~~ 154 (170)
+.+.++|+++|+.|++ +-+.|++|+ +|.||+.|++.+-+++.....+..+. +.++||+|..|..++ + .|+++.
T Consensus 206 ~~lfe~LDr~E~vL~~-~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~~~~ 284 (319)
T KOG2903|consen 206 NQLFEALDRCEDVLGK-NRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPGFSS 284 (319)
T ss_pred HHHHHHHHHHHHHHhc-ccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHhhccchhh
Confidence 7789999999999985 234599999 99999999999999987764444443 456999999999999 5 999998
Q ss_pred HHHhhh
Q 036672 155 TYKKRF 160 (170)
Q Consensus 155 ~~~~~~ 160 (170)
|..=..
T Consensus 285 Ttd~~h 290 (319)
T KOG2903|consen 285 TTDFNH 290 (319)
T ss_pred ccchhH
Confidence 854433
No 56
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.31 E-value=5.3e-12 Score=84.50 Aligned_cols=67 Identities=27% Similarity=0.444 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhhhhcC-------CCCCcccCC-CchHHHHHHHHHHHhhhhhhccccccc----CCCChHHHHHHHHh-
Q 036672 81 NEARVAFHYFETPLSKF-------NDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDI----TAGRPQLATWIEEM- 147 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~-------~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~----~~~~p~l~~w~~r~- 147 (170)
+++.+.|+.||++|.+. ++++|++|+ +|+|||++++.+.++... +++. ...+|+|.+|++||
T Consensus 32 ~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~-----~~~~~~~~~~~~P~l~~w~~rv~ 106 (111)
T cd03204 32 DELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL-----GLSRRYWGNGKRPNLEAYFERVL 106 (111)
T ss_pred HHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc-----CccccccccccChHHHHHHHHHH
Confidence 67889999999999731 012699999 999999999999987643 2222 35799999999999
Q ss_pred cchHH
Q 036672 148 KNEAF 152 (170)
Q Consensus 148 ~~p~~ 152 (170)
+||+|
T Consensus 107 aRpsf 111 (111)
T cd03204 107 QRESF 111 (111)
T ss_pred cCCCC
Confidence 99975
No 57
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.30 E-value=4.2e-12 Score=78.54 Aligned_cols=48 Identities=21% Similarity=0.294 Sum_probs=44.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|+|++++|+++ ++|+.+.++..+.++++++ +||.|+||+|+++|
T Consensus 8 ~~~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~-~~p~~~vP~l~~~~ 56 (73)
T cd03059 8 DDVYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAE-LNPYGTVPTLVDRD 56 (73)
T ss_pred CChhHHHHHHHHHHcCCccEEEEcCCCCCCHHHHh-hCCCCCCCEEEECC
Confidence 499999999999999 9999999998877889999 89999999999887
No 58
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=2.4e-11 Score=80.77 Aligned_cols=90 Identities=22% Similarity=0.331 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhhh-hhhHHH----hhhc--c-C--C-------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHH
Q 036672 54 KREFAEELFSYTD-TFNKTA----RSSL--E-G--D-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYA 115 (170)
Q Consensus 54 ~~a~~~~~~~~~~-~~~~~~----~~~~--~-~--~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~ 115 (170)
+|+++++|+.+.. .+.+.+ ...+ . + + .+.+.+.|+.+|++|+ +++|++|+ +|+||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~---~~~~l~g~~~t~aDi~~~ 78 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLA---GRPYLAGDRFTLADIPLG 78 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhC---CCCcccCCCCCHHHHHHH
Confidence 4788899988874 344332 1111 1 1 1 1578899999999996 57899999 999999999
Q ss_pred HHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHH
Q 036672 116 PFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAF 152 (170)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~ 152 (170)
+++...... +. ...++|+|.+|+++| ++|+|
T Consensus 79 ~~~~~~~~~-----~~-~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 79 CSAYRWFEL-----PI-ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHc-----cc-ccccCchHHHHHHHHHhCCCC
Confidence 988543321 22 247899999999999 99975
No 59
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.26 E-value=1.1e-10 Score=78.76 Aligned_cols=69 Identities=23% Similarity=0.518 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCCCchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQFSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYK 157 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~ 157 (170)
+.+.+.++.+|..|+..++++|++|++|+||+++++++.++... +.+. .|+|.+|++|| ++|++++.++
T Consensus 44 ~~~~~~~~~le~~l~~~~~~~yl~Gd~T~ADi~l~~~~~~~~~~-----~~~~---~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 44 ADIARIEAIWAECLARFQGGPFLFGDFSIADAFFAPVVTRFRTY-----GLPL---SPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHHc-----CCCC---CHHHHHHHHHHHCCHHHHHHHh
Confidence 55666677777777532367899999999999999999887532 2222 29999999999 9999998765
No 60
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.22 E-value=2.3e-11 Score=75.57 Aligned_cols=48 Identities=13% Similarity=0.190 Sum_probs=43.0
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC--ChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN--RPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~--~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||+|+|++++|+++ ++|+.+.++... +.++|++ +||.|+||+|+++|
T Consensus 9 ~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~-~nP~g~vP~L~~~g 59 (73)
T cd03043 9 YSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILE-FSPTGKVPVLVDGG 59 (73)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHh-hCCCCcCCEEEECC
Confidence 599999999999999 999999998753 3478988 89999999999887
No 61
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.21 E-value=2.4e-11 Score=75.53 Aligned_cols=48 Identities=29% Similarity=0.368 Sum_probs=44.0
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCC-CCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLA-NKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~-g~vPvL~~~~ 49 (170)
.||||+|+|++|+++ ++|+.+.++...+++++++ +||. |+||+|+++|
T Consensus 8 ~sp~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~-~~p~~~~vP~l~~~~ 57 (74)
T cd03058 8 ASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLA-SNPVHKKIPVLLHNG 57 (74)
T ss_pred CCchHHHHHHHHHHcCCCCEEEEeCcccCCHHHHH-hCCCCCCCCEEEECC
Confidence 499999999999999 9999999998777788988 8995 9999999877
No 62
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.20 E-value=3e-11 Score=74.90 Aligned_cols=48 Identities=17% Similarity=0.227 Sum_probs=42.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC---ChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN---RPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~---~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|++++++|+++ ++|+.+.++... ..+++++ +||.|+||+|+++|
T Consensus 8 ~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~-~~p~~~vP~l~~~~ 59 (74)
T cd03045 8 GSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLK-LNPQHTVPTLVDNG 59 (74)
T ss_pred CCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHh-hCcCCCCCEEEECC
Confidence 499999999999999 999999998643 3478999 89999999999886
No 63
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.18 E-value=5.9e-11 Score=77.95 Aligned_cols=63 Identities=21% Similarity=0.400 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAF 152 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~ 152 (170)
.++.+.++.+|+.|+ +++|++|+ +|+||+++++++.+.... +.. ...+|+|.+|+++| ++|++
T Consensus 36 ~~~~~~l~~le~~L~---~~~~l~G~~~t~aDi~~~~~~~~~~~~-----~~~-~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 36 ARAHRLLRLLEEHLA---GRDWLAGDRPTIADVAVYPYVALAPEG-----GVD-LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHc---cCCccCCCCCCHHHHHHHHHHHHHhcc-----CCC-hhhCcHHHHHHHHHHhCcCC
Confidence 678899999999996 57899999 999999999988754321 222 36799999999999 99974
No 64
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.18 E-value=2.6e-10 Score=74.59 Aligned_cols=79 Identities=19% Similarity=0.359 Sum_probs=62.8
Q ss_pred CChHHHHHHHHHHHhhh-hhhHHHhhhccCCHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhc
Q 036672 50 EDPNKREFAEELFSYTD-TFNKTARSSLEGDGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLE 127 (170)
Q Consensus 50 ~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~ 127 (170)
.|+.+++.+++|++... .+. .++.+++.+.++.+|++|+ +++|++|+ +|+|||++++.+.+.
T Consensus 13 ~~~~~~~~vd~~~d~~~~~l~-------~~~~~~~~~~l~~le~~L~---~~~fl~Gd~~tiADi~l~~~l~~~------ 76 (96)
T cd03200 13 NAPNAATNIDSWVDTAIFQLA-------EGSSKEKAAVLRALNSALG---RSPWLVGSEFTVADIVSWCALLQT------ 76 (96)
T ss_pred CCchHHHHHHHHHHHHHHHHh-------cCCHHHHHHHHHHHHHHHc---CCCccCCCCCCHHHHHHHHHHHHc------
Confidence 67788899999988654 332 2456778899999999996 67899999 999999999887642
Q ss_pred ccccccCCCChHHHHHHHHh
Q 036672 128 AKKYDITAGRPQLATWIEEM 147 (170)
Q Consensus 128 ~~~~~~~~~~p~l~~w~~r~ 147 (170)
+.. ...+|+|.+|++||
T Consensus 77 --~~~-~~~~p~l~~w~~r~ 93 (96)
T cd03200 77 --GLA-SAAPANVQRWLKSC 93 (96)
T ss_pred --ccc-cccChHHHHHHHHH
Confidence 222 25799999999999
No 65
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.18 E-value=8.2e-11 Score=80.47 Aligned_cols=61 Identities=18% Similarity=0.281 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-c
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-K 148 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~ 148 (170)
+.+.+.|+.+|++|+ +++|++|+ +|+||+++++++.++... .+.++.+.+|++.+|++|| +
T Consensus 61 ~~~~~~l~~l~~~L~---~~~fl~Gd~~t~AD~~l~~~l~~~~~~----~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 61 ANFRAALEPLRATLK---GQPFLGGAAPNYADYIVFGGFQWARIV----SPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHHc---CCCccCCCCCchhHHHHHHHHHHHHHc----CcccccccCChHHHHHHHHhc
Confidence 678899999999996 67899999 999999999999987653 2344557899999999999 5
No 66
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.18 E-value=4.4e-11 Score=74.57 Aligned_cols=48 Identities=25% Similarity=0.349 Sum_probs=42.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|+|+|++|+++ ++|+.+.++.. ..++++++ +||.|+||+|+++|
T Consensus 9 ~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~-~~P~~~vP~l~~~g 60 (76)
T cd03053 9 MSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLA-RNPFGQIPALEDGD 60 (76)
T ss_pred CChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHh-hCCCCCCCEEEECC
Confidence 499999999999999 99999999864 34578998 89999999999887
No 67
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.17 E-value=3.7e-11 Score=75.35 Aligned_cols=47 Identities=15% Similarity=0.061 Sum_probs=40.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC-ChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN-RPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~-~~~~~~~~~nP~g~vPvL~~~ 48 (170)
.||||+||+++|+++ ++|+.+.++... ..+++++ +||.|+||+|+++
T Consensus 9 ~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~-~~p~~~vP~l~~~ 57 (77)
T cd03041 9 GSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLE-KGGKVQVPYLVDP 57 (77)
T ss_pred CCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHH-hCCCCcccEEEeC
Confidence 499999999999999 999999887432 3568888 8999999999874
No 68
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.17 E-value=5.8e-11 Score=73.53 Aligned_cols=48 Identities=19% Similarity=0.319 Sum_probs=43.1
Q ss_pred CCchhHHHHHHHhc--c-cCccEEecCCCCChhhHhhhcCCCCCcceEec-CC
Q 036672 1 MCPYAQRVWITRNC--K-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEH-NN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~--k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~-~~ 49 (170)
.||+|+|+|++|++ + ++|+.+.++..++++++++ +||.|+||+|++ +|
T Consensus 8 ~s~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~~vP~l~~~~g 59 (73)
T cd03049 8 TSPYVRKVRVAAHETGLGDDVELVLVNPWSDDESLLA-VNPLGKIPALVLDDG 59 (73)
T ss_pred CCcHHHHHHHHHHHhCCCCCcEEEEcCcccCChHHHH-hCCCCCCCEEEECCC
Confidence 49999999999999 8 9999999997777788998 899999999985 44
No 69
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.16 E-value=6.1e-11 Score=76.44 Aligned_cols=47 Identities=34% Similarity=0.713 Sum_probs=43.6
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
.||||+|++++|+++ ++|+.+.++...+++++.+ +||.|+||+|+++
T Consensus 26 ~sp~~~kv~~~L~~~gl~~~~~~v~~~~~~~~~~~-~np~~~vPvL~~~ 73 (89)
T cd03055 26 FCPYAQRARLVLAAKNIPHEVININLKDKPDWFLE-KNPQGKVPALEID 73 (89)
T ss_pred CCchHHHHHHHHHHcCCCCeEEEeCCCCCcHHHHh-hCCCCCcCEEEEC
Confidence 599999999999999 9999999998777788988 8999999999987
No 70
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.15 E-value=5.8e-11 Score=74.05 Aligned_cols=47 Identities=13% Similarity=0.232 Sum_probs=42.5
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC--CChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ--NRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~--~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
.||+|+++|++|+++ ++|+.+.++.. +++++|++ +||.|+||+|+++
T Consensus 8 ~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~-~nP~~~vP~L~~~ 57 (75)
T cd03044 8 GNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLK-KFPLGKVPAFEGA 57 (75)
T ss_pred CCccHHHHHHHHHHcCCceEEEecccccccCCHHHHH-hCCCCCCCEEEcC
Confidence 389999999999999 99999999975 45688999 8999999999975
No 71
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.15 E-value=7.3e-11 Score=72.82 Aligned_cols=48 Identities=15% Similarity=0.179 Sum_probs=42.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|++++++|+++ ++|+.+.++.. .+++++++ +||.|+||+|+++|
T Consensus 8 ~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-~~p~~~vP~l~~~~ 59 (73)
T cd03056 8 LSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLA-LNPNGEVPVLELDG 59 (73)
T ss_pred CCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHH-hCCCCCCCEEEECC
Confidence 499999999999999 99999999864 34578998 89999999999886
No 72
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.12 E-value=1.1e-10 Score=72.14 Aligned_cols=47 Identities=30% Similarity=0.356 Sum_probs=41.2
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
+||||+|+|++|+++ ++|+.+.++.. ...+++.+ +||.|+||+|+++
T Consensus 8 ~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~-~~p~~~vP~l~~~ 58 (74)
T cd03051 8 TAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLA-KNPAGTVPVLELD 58 (74)
T ss_pred CCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHh-hCCCCCCCEEEeC
Confidence 599999999999999 99999999863 24578988 8999999999864
No 73
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.11 E-value=3.2e-10 Score=74.33 Aligned_cols=85 Identities=27% Similarity=0.427 Sum_probs=56.9
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHhhhc----c------CCHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHH
Q 036672 51 DPNKREFAEELFSYTDTFNKTARSSL----E------GDGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIE 119 (170)
Q Consensus 51 ~~~~~a~~~~~~~~~~~~~~~~~~~~----~------~~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~ 119 (170)
++..++.+++|+.+.. ...... . ...+++.+.++.+|++|+. .+|+|++|+ ||+||+++++.+.
T Consensus 2 ~~~~~a~i~~W~~f~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~-~~~~~l~G~~~T~AD~~v~~~l~ 76 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSV----AFRRRKARLEKDEASGDFSREELPKALKILEKHLAE-RGGDFLVGDKPTLADIAVFGFLA 76 (99)
T ss_dssp --TTHHHHHHHHH-GH----CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-TSSSSSSSSS--HHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccc----hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHc-CCCeeecCCCCCHHHHHHHHHHH
Confidence 5677888888888441 100000 0 1127889999999999986 334599999 9999999999886
Q ss_pred HhhhhhhcccccccCCCChHHHHHHHHh
Q 036672 120 RCKPFLLEAKKYDITAGRPQLATWIEEM 147 (170)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~p~l~~w~~r~ 147 (170)
.+.. . .+.+++|+|.+|++||
T Consensus 77 ~~~~------~-~~~~~~p~L~~w~~ri 97 (99)
T PF14497_consen 77 SLRW------A-DFPKDYPNLVRWYERI 97 (99)
T ss_dssp HHHC------C-HHTTTCHHHHHHHHHH
T ss_pred HHhh------c-ccccccHHHHHHHHhh
Confidence 5441 2 2226899999999998
No 74
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.10 E-value=1.7e-10 Score=71.43 Aligned_cols=48 Identities=13% Similarity=0.025 Sum_probs=42.2
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||++++||++|+++ ++|+.+.++.. .+.+++++ +||.|+||+|+++|
T Consensus 8 ~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~-~nP~~~vP~L~~~~ 59 (73)
T cd03047 8 SSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLA-MNPNGRVPVLEDGD 59 (73)
T ss_pred CCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHh-hCCCCCCCEEEECC
Confidence 489999999999999 99999998853 34578988 89999999999887
No 75
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.08 E-value=2.2e-10 Score=70.56 Aligned_cols=46 Identities=15% Similarity=0.277 Sum_probs=38.8
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
.||||+|||++|.++ ++|+.+.++... .....+ .||.|+||+|+++
T Consensus 8 ~~p~~~rvr~~L~~~gl~~~~~~~~~~~-~~~~~~-~~~~~~vP~L~~~ 54 (71)
T cd03037 8 HCPFCVKARMIAGLKNIPVEQIILQNDD-EATPIR-MIGAKQVPILEKD 54 (71)
T ss_pred CCcHhHHHHHHHHHcCCCeEEEECCCCc-hHHHHH-hcCCCccCEEEeC
Confidence 599999999999999 999999888543 233456 7999999999986
No 76
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.07 E-value=1.4e-10 Score=71.95 Aligned_cols=48 Identities=8% Similarity=0.086 Sum_probs=42.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.|++|+++|++|+++ ++|+.+.++....++++++ +||.|+||+|+++|
T Consensus 9 ~~~~~~~v~~~L~~~~i~~e~~~v~~~~~~~~~~~-~~p~~~vP~l~~~~ 57 (73)
T cd03076 9 VRGRAEAIRLLLADQGISWEEERVTYEEWQESLKP-KMLFGQLPCFKDGD 57 (73)
T ss_pred CcchHHHHHHHHHHcCCCCEEEEecHHHhhhhhhc-cCCCCCCCEEEECC
Confidence 389999999999999 9999999987555567888 89999999999887
No 77
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.07 E-value=7.2e-10 Score=73.09 Aligned_cols=88 Identities=15% Similarity=0.208 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhhhhhhHHHhhhc-c-C-----C------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHH
Q 036672 54 KREFAEELFSYTDTFNKTARSSL-E-G-----D------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIE 119 (170)
Q Consensus 54 ~~a~~~~~~~~~~~~~~~~~~~~-~-~-----~------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~ 119 (170)
+++++++++...+.+...+...+ . . + .+.+.+.++.||+.|.. ++++|++|+ +|+||+++++.+.
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~-~~~~~~~G~~~s~aDi~l~~~~~ 80 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKLEKILKE-NGGGYLVGDKLTWADLVVFDVLD 80 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHHHHHHHH-cCCCeeeCCCccHHHHHHHHHHH
Confidence 46677887777655554433221 1 0 1 15678889999999962 127899999 9999999999998
Q ss_pred Hhhhhhhccccccc-CCCChHHHHHHHHh
Q 036672 120 RCKPFLLEAKKYDI-TAGRPQLATWIEEM 147 (170)
Q Consensus 120 ~~~~~~~~~~~~~~-~~~~p~l~~w~~r~ 147 (170)
++... +... ...+|++.+|++++
T Consensus 81 ~~~~~-----~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 81 YLLYL-----DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHhh-----CchhhHHhChhHHHHHHhC
Confidence 88643 2222 46799999999985
No 78
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.07 E-value=1.2e-09 Score=82.07 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=87.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC-------------------C---ChHHHHH
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN-------------------E---DPNKREF 57 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~-------------------~---~~~~~a~ 57 (170)
+||||.||-..|... ||||++.-. +.. .++.|++|.++.+| . .+.++|+
T Consensus 60 LSPfClKvEt~lR~~~IpYE~~~~~-------~~~-rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~L~~e~~a~ 131 (281)
T KOG4244|consen 60 LSPFCLKVETFLRAYDIPYEIVDCS-------LKR-RSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDDLSAEQRAQ 131 (281)
T ss_pred CChHHHHHHHHHHHhCCCceecccc-------cee-eccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCCCCHHHHHH
Confidence 599999999999999 999977533 324 58999999999998 1 2344554
Q ss_pred HHHHHHhhh-hhhH---------------------------H-Hhhhc-----c-----------C--CH----HHHHHH
Q 036672 58 AEELFSYTD-TFNK---------------------------T-ARSSL-----E-----------G--DG----NEARVA 86 (170)
Q Consensus 58 ~~~~~~~~~-~~~~---------------------------~-~~~~~-----~-----------~--~~----~~l~~~ 86 (170)
.+.+....+ .+.+ . ..+.+ . | +. +-+.+-
T Consensus 132 s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~ell~rD 211 (281)
T KOG4244|consen 132 SRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDELLHRD 211 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHHHHHHH
Confidence 433222211 0000 0 00100 0 0 11 234566
Q ss_pred HHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccc-cc-CCCChHHHHHHHHh
Q 036672 87 FHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKY-DI-TAGRPQLATWIEEM 147 (170)
Q Consensus 87 l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~-~~-~~~~p~l~~w~~r~ 147 (170)
|+.+++.|. +.+||+|| +|-+|+.+++.++.+-. +..... ++ .+++|+|..|.+|+
T Consensus 212 lr~i~~~Lg---~KkflfGdkit~~DatvFgqLa~v~Y--P~~~~i~d~le~d~p~l~eYceRI 270 (281)
T KOG4244|consen 212 LRAISDYLG---DKKFLFGDKITPADATVFGQLAQVYY--PFRSHISDLLEGDFPNLLEYCERI 270 (281)
T ss_pred HHHHHHHhC---CCccccCCCCCcceeeehhhhhheec--cCCCcHHHHHhhhchHHHHHHHHH
Confidence 778888884 77999999 99999999998886532 111111 33 35799999999999
No 79
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.06 E-value=3.2e-10 Score=70.78 Aligned_cols=48 Identities=21% Similarity=0.313 Sum_probs=42.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC---hhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR---PDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~---~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|++++++|+++ ++|+.+.++..++ .+++++ +||.|+||+|+++|
T Consensus 8 ~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~-~~p~~~vP~L~~~~ 59 (76)
T cd03050 8 MSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKK-INPFGKVPAIVDGD 59 (76)
T ss_pred CChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHH-hCcCCCCCEEEECC
Confidence 489999999999999 9999999986443 368988 89999999999877
No 80
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.05 E-value=2.1e-10 Score=73.00 Aligned_cols=47 Identities=17% Similarity=0.225 Sum_probs=40.4
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCCh---hhHhhhcCCCCCcceEecC-C
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRP---DWYKMKVYLANKMPSLEHN-N 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~---~~~~~~~nP~g~vPvL~~~-~ 49 (170)
+||||+|||++|+++ ++|+.+.++....+ +++ + +||.|+||+|+++ |
T Consensus 15 ~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~-~~p~~~vP~L~~~~~ 66 (84)
T cd03038 15 FSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-T-SGGFYTVPVIVDGSG 66 (84)
T ss_pred cCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-c-CCCCceeCeEEECCC
Confidence 699999999999999 99999999865433 345 6 8999999999998 5
No 81
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.02 E-value=7.7e-10 Score=70.92 Aligned_cols=65 Identities=17% Similarity=0.129 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccc-ccCCCChHHHHHHHHh
Q 036672 80 GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKY-DITAGRPQLATWIEEM 147 (170)
Q Consensus 80 ~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~r~ 147 (170)
.+++.+.++.+|+.|+ +++|++|+ +|+|||++++.+.++.......... ...+.+|++.+|++||
T Consensus 21 ~~~~~~~l~~le~~L~---~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~ 87 (88)
T cd03193 21 YSLAKKDLKALSDLLG---DKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERI 87 (88)
T ss_pred HHHHHHHHHHHHHHhC---CCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHh
Confidence 3678899999999996 67899999 9999999999998875321000001 1235799999999986
No 82
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.02 E-value=6.1e-10 Score=73.36 Aligned_cols=85 Identities=21% Similarity=0.386 Sum_probs=61.8
Q ss_pred HHHHHHHHHHhhhh-hhHHHhh-----hc----cCC-------HHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHH
Q 036672 54 KREFAEELFSYTDT-FNKTARS-----SL----EGD-------GNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYA 115 (170)
Q Consensus 54 ~~a~~~~~~~~~~~-~~~~~~~-----~~----~~~-------~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~ 115 (170)
+||.+++|+.+.++ +.+.... .+ ..+ .+++.+.++.||+.|+ +++|++|+ +|+|||+++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~g~~~slaDi~~~ 78 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLA---GRDFLVGDALTIADIALA 78 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHc---cCccccCCCCCHHHHHHH
Confidence 47889999988743 3222111 11 111 1667888999999996 67899999 999999999
Q ss_pred HHHHHhhhhhhcccccccCCCChHHHHHHHHh
Q 036672 116 PFIERCKPFLLEAKKYDITAGRPQLATWIEEM 147 (170)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~ 147 (170)
+++.++... +.+ ..++|++.+|++++
T Consensus 79 ~~~~~~~~~-----~~~-~~~~p~l~~~~~~~ 104 (105)
T cd03179 79 AYTHVADEG-----GFD-LADYPAIRAWLARI 104 (105)
T ss_pred HHHHhcccc-----CCC-hHhCccHHHHHHhh
Confidence 999987542 333 46799999999986
No 83
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.01 E-value=6.5e-10 Score=68.57 Aligned_cols=48 Identities=23% Similarity=0.287 Sum_probs=42.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|+++|++|+++ ++|+.+.++.. ...+++++ +||.|+||+|+++|
T Consensus 8 ~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~-~~p~~~vP~l~~~~ 59 (73)
T cd03042 8 RSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRA-LNPQGLVPTLVIDG 59 (73)
T ss_pred CCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHH-hCCCCCCCEEEECC
Confidence 489999999999999 99999999863 34578998 89999999999887
No 84
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.01 E-value=3.9e-10 Score=69.63 Aligned_cols=48 Identities=13% Similarity=0.032 Sum_probs=41.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC-hhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR-PDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|++||++|+++ ++|+.+.++.... .+++.+ +||.|+||+|+++|
T Consensus 8 ~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~-~~p~~~vP~L~~~~ 57 (72)
T cd03039 8 IRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKP-TLPFGQLPVLEIDG 57 (72)
T ss_pred CcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhcc-CCcCCCCCEEEECC
Confidence 489999999999999 9999999986432 245878 89999999999887
No 85
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.00 E-value=6.5e-10 Score=70.20 Aligned_cols=46 Identities=13% Similarity=0.255 Sum_probs=41.2
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
+|+|+||+++|+++ ++|+.+.++.. +.+++|++ +||.|+||+|+++
T Consensus 9 ~~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~-~~p~~~vP~l~~~ 58 (81)
T cd03048 9 TPNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLK-INPNGRIPAIVDH 58 (81)
T ss_pred CCChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHH-hCcCCCCCEEEeC
Confidence 58999999999999 99999999864 35578998 8999999999987
No 86
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.99 E-value=1.2e-08 Score=67.60 Aligned_cols=97 Identities=21% Similarity=0.319 Sum_probs=65.1
Q ss_pred ChHHHHHHHHHHHhhhh-hhHHH----hh-hccCC---------HHHHHHHHHHHHhhhhcCCCCCcccCCCchHHHHHH
Q 036672 51 DPNKREFAEELFSYTDT-FNKTA----RS-SLEGD---------GNEARVAFHYFETPLSKFNDGPFLQGQFSLADIAYA 115 (170)
Q Consensus 51 ~~~~~a~~~~~~~~~~~-~~~~~----~~-~~~~~---------~~~l~~~l~~le~~L~~~~~~~~l~G~~t~AD~~l~ 115 (170)
|..+||+.+++..|+.+ |++.- .. .+.+. .+.+.+.+...+..|. .+++||+|++|+||..++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~--~g~~~LFGewsIAD~dlA 78 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLA--DGGPNLFGEWSIADADLA 78 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTT--T--SSTTSS--HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhc--cCCCCccccchHHHHHHH
Confidence 56789999999999854 44321 11 12211 1556666777788887 378999999999999999
Q ss_pred HHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHHHHHH
Q 036672 116 PFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFNQTYK 157 (170)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~~~~~ 157 (170)
+++.++... +-+++ +.+..|.++. +||++++-+.
T Consensus 79 ~ml~Rl~~~-----gd~vP---~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 79 LMLNRLVTY-----GDPVP---ERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHHTT-----T-------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHHc-----CCCCC---HHHHHHHHHHHCCHHHHHHHH
Confidence 999998754 32332 6899999999 9999998753
No 87
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.98 E-value=1.5e-09 Score=70.29 Aligned_cols=61 Identities=34% Similarity=0.570 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM 147 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~ 147 (170)
+.+.+.++.||+.|+ +++|++|+ +|+||+++++++.++..... ...+...+|++.+|+++|
T Consensus 39 ~~~~~~~~~l~~~L~---~~~~~~g~~~t~aDi~~~~~l~~~~~~~~---~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 39 EELAAALAALEKLLA---GRPYLAGDRFSLADIALAPVLARLDLLGP---LLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHc---cCCCCCCCCcCHHHHHHHHHHHHHHHhhh---hhhhhccCccHHHHHHhC
Confidence 678899999999996 56899999 99999999999999876531 111346799999999986
No 88
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.91 E-value=1.9e-09 Score=67.11 Aligned_cols=41 Identities=17% Similarity=0.086 Sum_probs=36.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||+||+++|+++ ++|+.+.++.. + +||.|+||+|+++|
T Consensus 16 ~sp~~~~v~~~L~~~gi~~~~~~~~~~-------~-~~p~g~vPvl~~~g 57 (75)
T cd03080 16 LSPFCLKVETFLRMAGIPYENKFGGLA-------K-RSPKGKLPFIELNG 57 (75)
T ss_pred CCHHHHHHHHHHHHCCCCcEEeecCcc-------c-CCCCCCCCEEEECC
Confidence 589999999999999 99999988742 5 79999999999987
No 89
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=98.85 E-value=5e-09 Score=65.10 Aligned_cols=46 Identities=20% Similarity=0.151 Sum_probs=41.0
Q ss_pred chhHHHHHHHhcc-cCccEEecCCC---CChhhHhhhcCCCCCcceEecCC
Q 036672 3 PYAQRVWITRNCK-EKIKLVPIDLQ---NRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 3 P~~~rvr~~L~~k-i~~e~~~v~~~---~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
++++|||++|+++ ++|+.+.++.. ++++++++ +||.|+||+|+++|
T Consensus 9 ~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~-~~p~~~vP~l~~~g 58 (76)
T cd03046 9 SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLA-INPLGKVPVLVDGD 58 (76)
T ss_pred CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHh-cCCCCCCCEEEECC
Confidence 5789999999999 99999999864 45688988 89999999999887
No 90
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=98.83 E-value=3.6e-09 Score=66.07 Aligned_cols=45 Identities=18% Similarity=0.284 Sum_probs=38.2
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
.||||+|+|++|+++ ++|+.+.++....++ + + .||.++||+|+++
T Consensus 9 ~~p~c~kv~~~L~~~gi~y~~~~~~~~~~~~-~-~-~~~~~~vP~l~~~ 54 (77)
T cd03040 9 TCPFCCKVRAFLDYHGIPYEVVEVNPVSRKE-I-K-WSSYKKVPILRVE 54 (77)
T ss_pred CCHHHHHHHHHHHHCCCceEEEECCchhHHH-H-H-HhCCCccCEEEEC
Confidence 499999999999999 999999987644333 3 5 6999999999976
No 91
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=98.82 E-value=7e-09 Score=64.74 Aligned_cols=44 Identities=18% Similarity=0.209 Sum_probs=39.2
Q ss_pred hhHHHHHHHhcc-cCccEEecCCCC---ChhhHhhhcCCCCCcceEecC
Q 036672 4 YAQRVWITRNCK-EKIKLVPIDLQN---RPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 4 ~~~rvr~~L~~k-i~~e~~~v~~~~---~~~~~~~~~nP~g~vPvL~~~ 48 (170)
.+++||++|+++ ++|+.+.++..+ +++++++ +||.|+||+|+++
T Consensus 10 ~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~-~np~~~vP~l~~~ 57 (77)
T cd03057 10 CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLA-INPKGQVPALVLD 57 (77)
T ss_pred chHHHHHHHHHcCCCceEEEEecccCccCCHhHHH-hCCCCCCCEEEEC
Confidence 588999999999 999999998643 4688998 8999999999987
No 92
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.81 E-value=1.2e-08 Score=71.33 Aligned_cols=60 Identities=22% Similarity=0.364 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccc-ccCCCChHHHHHHHHh
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKY-DITAGRPQLATWIEEM 147 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~r~ 147 (170)
+.+.++++.+-+.+. ++++|++|+ +|+||+++++++..+... .++ ++ .++|+|.+|++||
T Consensus 82 ~~L~~a~~~w~~~~~--~~~~FlaGd~ptIADisvyg~l~s~e~~----~~~~Dl-~~~p~I~~W~eRm 143 (149)
T cd03197 82 EWLYDALNTWVAALG--KDRQFHGGSKPNLADLAVYGVLRSVEGH----PAFKDM-VEETKIGEWYERM 143 (149)
T ss_pred HHHHHHHHHHHHHhc--CCCCccCCCCCCHHHHHHHHHHHHHHHh----ccccch-hhCcCHHHHHHHH
Confidence 667777776655565 256899999 999999999999887754 245 43 5899999999999
No 93
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=98.79 E-value=1.1e-08 Score=61.69 Aligned_cols=48 Identities=27% Similarity=0.344 Sum_probs=41.8
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChh-hHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPD-WYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~-~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|++++++|+++ ++|+.+.++...... ++.+ ++|.+++|+|+++|
T Consensus 8 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~P~l~~~~ 57 (71)
T cd00570 8 GSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLA-LNPLGKVPVLEDGG 57 (71)
T ss_pred CCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHh-cCCCCCCCEEEECC
Confidence 499999999999999 999999998654443 5877 89999999999987
No 94
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.76 E-value=1.2e-08 Score=62.89 Aligned_cols=41 Identities=20% Similarity=0.095 Sum_probs=36.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||++++++|+++ ++|+.+.++.. . +||.|+||+|+++|
T Consensus 15 ~sp~~~~v~~~L~~~~i~~~~~~~~~~-------~-~~p~g~vP~l~~~g 56 (72)
T cd03054 15 LSPECLKVETYLRMAGIPYEVVFSSNP-------W-RSPTGKLPFLELNG 56 (72)
T ss_pred CCHHHHHHHHHHHhCCCceEEEecCCc-------c-cCCCcccCEEEECC
Confidence 599999999999999 99999988742 3 59999999999987
No 95
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.76 E-value=2.3e-08 Score=65.30 Aligned_cols=58 Identities=28% Similarity=0.354 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM 147 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~ 147 (170)
..+.+.|+.+|++|+ +++| + +|+|||++++.+.++.... .+.+...++|+|.+|++||
T Consensus 40 ~~~~~~l~~le~~L~---~~~~---d~~TlADi~l~~~l~~~~~~~---~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 40 GKIERALDALEAELA---KLPL---DPLDLADIAVACALGYLDFRH---PDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHhhh---hCCC---CCCCHHHHHHHHHHHHHHhHc---cCcchhhhChHHHHHHHhC
Confidence 678889999999996 5678 7 9999999999998886431 1233346899999999986
No 96
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.68 E-value=3.5e-08 Score=67.65 Aligned_cols=64 Identities=11% Similarity=0.114 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccc-ccCCCChHHHHHHHHh
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKY-DITAGRPQLATWIEEM 147 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~r~ 147 (170)
+...+.|+.|++.|. +++|++|| ||.||+++++++..+.....+.... .....||+|.+|.+||
T Consensus 60 ~~~~~~l~aLs~~Lg---~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 60 EEVDQCCQALSQRLG---TQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRI 125 (126)
T ss_pred HHHHHHHHHHHHHHC---CCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhc
Confidence 567788999999995 78999999 9999999999988765321100011 1246899999999997
No 97
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=98.68 E-value=3.1e-08 Score=61.85 Aligned_cols=46 Identities=17% Similarity=0.245 Sum_probs=38.3
Q ss_pred chhHHHHHHHhcc-cCccEEecCCCCC---hhhHhhhcCCC-CCcceEecC-C
Q 036672 3 PYAQRVWITRNCK-EKIKLVPIDLQNR---PDWYKMKVYLA-NKMPSLEHN-N 49 (170)
Q Consensus 3 P~~~rvr~~L~~k-i~~e~~~v~~~~~---~~~~~~~~nP~-g~vPvL~~~-~ 49 (170)
..|+++|++|+++ ++|+.+.++...+ .+++++ .||. |+||+|+++ |
T Consensus 10 ~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~-~~p~~g~vP~l~~~~~ 61 (76)
T PF02798_consen 10 GRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLA-INPMFGKVPALEDGDG 61 (76)
T ss_dssp TTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHH-HTTTSSSSSEEEETTT
T ss_pred CchHHHHHHHHHhcccCceEEEecccccccchhhhh-cccccceeeEEEECCC
Confidence 4689999999999 9999999997433 378988 8999 999999999 6
No 98
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.63 E-value=5.6e-08 Score=61.62 Aligned_cols=48 Identities=13% Similarity=0.063 Sum_probs=37.7
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCCC----hhhHhhhc----CCCCCcceEecCC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQNR----PDWYKMKV----YLANKMPSLEHNN 49 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~~----~~~~~~~~----nP~g~vPvL~~~~ 49 (170)
++.|+++|++|+++ ++|+.+.+++..+ .+++.+.. +|.|+||+|++||
T Consensus 9 ~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g 65 (82)
T cd03075 9 RGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGD 65 (82)
T ss_pred ccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECC
Confidence 67899999999999 9999999997542 23343202 2999999999887
No 99
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=5e-07 Score=64.30 Aligned_cols=137 Identities=13% Similarity=0.218 Sum_probs=85.9
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC------------------CChH----HHHHH
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN------------------EDPN----KREFA 58 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~------------------~~~~----~~a~~ 58 (170)
||||.|+|++.-.+ ||+|....+..+.+--- . +-...+||+|+-++ ..|. .+--+
T Consensus 9 CPfcvrarmi~Gl~nipve~~vL~nDDe~Tp~-r-miG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~lt~~~~pai 86 (215)
T COG2999 9 CPFCVRARMIFGLKNIPVELHVLLNDDEETPI-R-MIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKPLLTGKVRPAI 86 (215)
T ss_pred ChHHHHHHHHhhccCCChhhheeccCcccChh-h-hhcccccceEEccccccchhhhHHHHHHHHhcCchhhccCcCHHH
Confidence 99999999999999 99998888765543211 2 44678899998765 1111 12224
Q ss_pred HHHHHhhhhhh-----HHHh-------------hhcc-------C-------CH----HHHHHHHHHHHhhhhcCCCCCc
Q 036672 59 EELFSYTDTFN-----KTAR-------------SSLE-------G-------DG----NEARVAFHYFETPLSKFNDGPF 102 (170)
Q Consensus 59 ~~~~~~~~~~~-----~~~~-------------~~~~-------~-------~~----~~l~~~l~~le~~L~~~~~~~~ 102 (170)
+.|++.+..+. +.+. ..+. + +. ..+.+-|+.++..+.. ..=
T Consensus 87 ~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~---~s~ 163 (215)
T COG2999 87 EAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVG---PSA 163 (215)
T ss_pred HHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcC---cch
Confidence 45555443211 1111 1110 0 00 5677778888888862 222
Q ss_pred ccCCCchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cch
Q 036672 103 LQGQFSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNE 150 (170)
Q Consensus 103 l~G~~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p 150 (170)
+-|.+|.-|+.++|.+.-+-.. .+..++ .++..|..+| +..
T Consensus 164 ~n~~l~~ddi~vFplLRnlt~v----~gi~wp---s~v~dy~~~msekt 205 (215)
T COG2999 164 VNGELSEDDILVFPLLRNLTLV----AGIQWP---SRVADYRDNMSEKT 205 (215)
T ss_pred hccccchhhhhhhHHhccceec----ccCCCc---HHHHHHHHHHHHhh
Confidence 4455999999999999865433 233322 4899999999 644
No 100
>PRK10638 glutaredoxin 3; Provisional
Probab=98.60 E-value=6.5e-08 Score=61.37 Aligned_cols=48 Identities=19% Similarity=0.273 Sum_probs=41.8
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC-ChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN-RPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~-~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||++++.+|+++ ++|+.++++... ..+++.+ ++|.++||++..+|
T Consensus 11 ~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~-~~g~~~vP~i~~~g 60 (83)
T PRK10638 11 TCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIK-RSGRTTVPQIFIDA 60 (83)
T ss_pred CChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHH-HhCCCCcCEEEECC
Confidence 599999999999999 999999887543 3467888 89999999998877
No 101
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.54 E-value=1.5e-07 Score=65.48 Aligned_cols=64 Identities=14% Similarity=0.240 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccc-ccCCCChHHHHHHHHh
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKY-DITAGRPQLATWIEEM 147 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~r~ 147 (170)
+...+.++.||+.|. +++|++|+ +|.+|+++++++..+-......... .....+|+|.+|++||
T Consensus 67 ~~a~~~l~~l~~~L~---~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri 132 (137)
T cd03212 67 RDAKECLNLLSQRLG---ESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRI 132 (137)
T ss_pred HHHHHHHHHHHHHHC---CCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHH
Confidence 566788999999996 67999999 9999999999887664221000001 1246799999999999
No 102
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.36 E-value=6.5e-07 Score=56.58 Aligned_cols=48 Identities=6% Similarity=0.030 Sum_probs=38.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||.+++-+|+++ ++|+.++++-.....+.+. .++..+||+++.+|
T Consensus 10 ~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~-~~g~~~vPvv~i~~ 58 (81)
T PRK10329 10 DCVQCHATKRAMESRGFDFEMINVDRVPEAAETLR-AQGFRQLPVVIAGD 58 (81)
T ss_pred CCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHH-HcCCCCcCEEEECC
Confidence 599999999999999 9999888874332223334 47899999999987
No 103
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.34 E-value=7.3e-07 Score=54.33 Aligned_cols=48 Identities=15% Similarity=0.146 Sum_probs=41.0
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC-ChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN-RPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~-~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||+|.+++.+|.++ ++|+.+.++... ..+++.+ +||.+++|++.++|
T Consensus 9 ~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~-~~~~~~vP~i~~~~ 58 (73)
T cd02976 9 DCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKK-LNGYRSVPVVVIGD 58 (73)
T ss_pred CChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHH-HcCCcccCEEEECC
Confidence 599999999999999 999998887532 2257878 89999999999887
No 104
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.29 E-value=1.5e-06 Score=54.61 Aligned_cols=44 Identities=7% Similarity=0.018 Sum_probs=35.3
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcC-----CCCCcceEecCC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVY-----LANKMPSLEHNN 49 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~n-----P~g~vPvL~~~~ 49 (170)
|+.|++++|+|+++ ++||.+.++.. +++.+ .| |.|+||+|+++|
T Consensus 10 ~~~~~~v~~~l~~~gi~~e~~~v~~~---~~~~~-~~~~~~~~~g~vP~L~~~g 59 (79)
T cd03077 10 RGRMESIRWLLAAAGVEFEEKFIESA---EDLEK-LKKDGSLMFQQVPMVEIDG 59 (79)
T ss_pred CChHHHHHHHHHHcCCCcEEEEeccH---HHHHh-hccccCCCCCCCCEEEECC
Confidence 57889999999999 99999998852 23333 34 589999999877
No 105
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=98.22 E-value=2.1e-06 Score=53.89 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=40.1
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||++++.+|+.. ++|+.+.++-....+++.+ .++..+||++..+|
T Consensus 17 ~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~~~~~~-~~g~~~vP~i~i~g 65 (79)
T TIGR02190 17 GCPFCAKAKATLKEKGYDFEEIPLGNDARGRSLRA-VTGATTVPQVFIGG 65 (79)
T ss_pred CCHhHHHHHHHHHHcCCCcEEEECCCChHHHHHHH-HHCCCCcCeEEECC
Confidence 599999999999999 9999988874433355666 68899999999887
No 106
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.21 E-value=2.1e-06 Score=53.00 Aligned_cols=48 Identities=17% Similarity=0.075 Sum_probs=40.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC-ChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN-RPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~-~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|++++.+|+++ ++|+.+.++-.. ..+++.+ +++.+++|++..+|
T Consensus 10 ~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~-~~g~~~vP~v~i~~ 59 (73)
T cd03027 10 GCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEE-RTGSSVVPQIFFNE 59 (73)
T ss_pred CChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHH-HhCCCCcCEEEECC
Confidence 499999999999999 999988777432 2257887 79999999998887
No 107
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.11 E-value=4.5e-06 Score=51.35 Aligned_cols=48 Identities=13% Similarity=0.033 Sum_probs=37.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|++++-+|+++ ++|+.+.++-.......++ .++...||++..+|
T Consensus 8 ~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~-~~g~~~vP~v~~~g 56 (72)
T TIGR02194 8 NCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVK-AQGFRQVPVIVADG 56 (72)
T ss_pred CCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHH-HcCCcccCEEEECC
Confidence 499999999999999 9999988874433333334 35778999999865
No 108
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.03 E-value=1.2e-05 Score=49.43 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=39.2
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||.+++.+|+.. ++|+.++++-......+.. ++...+||++..+|
T Consensus 10 ~Cp~C~~ak~~L~~~~i~~~~~~v~~~~~~~~~~~-~~g~~~vP~ifi~g 58 (72)
T cd03029 10 GCPFCARAKAALQENGISYEEIPLGKDITGRSLRA-VTGAMTVPQVFIDG 58 (72)
T ss_pred CCHHHHHHHHHHHHcCCCcEEEECCCChhHHHHHH-HhCCCCcCeEEECC
Confidence 599999999999999 9999988875432344555 67888999999887
No 109
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.00 E-value=9.8e-06 Score=48.97 Aligned_cols=48 Identities=17% Similarity=0.136 Sum_probs=40.0
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC-ChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN-RPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~-~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||+|++++.+|..+ ++|+.+.++-.. ..+++.+ +++..++|++..+|
T Consensus 9 ~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~-~~~~~~~P~~~~~~ 58 (72)
T cd02066 9 TCPYCKRAKRLLESLGIEFEEIDILEDGELREELKE-LSGWPTVPQIFING 58 (72)
T ss_pred CCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHH-HhCCCCcCEEEECC
Confidence 599999999999999 999988776432 2367777 79999999998877
No 110
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.00 E-value=1.6e-05 Score=50.12 Aligned_cols=49 Identities=14% Similarity=0.146 Sum_probs=39.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC--ChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN--RPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~--~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||.++.-+|+.+ ++|+.+.++... ...++..+.++..+||++..||
T Consensus 10 ~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~ 61 (80)
T COG0695 10 GCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVPQIFIGG 61 (80)
T ss_pred CCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcCEEEECC
Confidence 499999999999999 999999888654 2234444256899999999987
No 111
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.98 E-value=0.00017 Score=52.83 Aligned_cols=62 Identities=10% Similarity=0.116 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccc---ccCCCChHHHHHHHHh
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKY---DITAGRPQLATWIEEM 147 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~---~~~~~~p~l~~w~~r~ 147 (170)
+++....+.|+..|+ .++|+.|+ ||-+|..+++.+..+-... .... ....+|++|-++..|+
T Consensus 180 e~vdkc~~aLsa~L~---~q~yf~g~~P~elDAlvFGHlytilTt~--Lpn~ela~~lkkys~LlefcrrI 245 (257)
T KOG3027|consen 180 EQVDKCCRALSAQLG---SQPYFTGDQPTELDALVFGHLYTILTTR--LPNMELANILKKYSNLLEFCRRI 245 (257)
T ss_pred HHHHHHHHHHHHHhc---CCCccCCCCccHHHHHHHhhhHHhhhhc--CCcHHHHHHHHHhHHHHHHHHHH
Confidence 344555667777785 68999999 9999999998877543321 1121 2346889999988888
No 112
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=97.97 E-value=1.1e-05 Score=49.94 Aligned_cols=41 Identities=12% Similarity=-0.041 Sum_probs=32.9
Q ss_pred CchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+|+|.|++++|++. ++|+.+.. .+. . . .+|.|+||+|++||
T Consensus 17 ~~~~~kv~~~L~elglpye~~~~--~~~--~--~-~~P~GkVP~L~~dg 58 (74)
T cd03079 17 NASCLAVQTFLKMCNLPFNVRCR--ANA--E--F-MSPSGKVPFIRVGN 58 (74)
T ss_pred CCCHHHHHHHHHHcCCCcEEEec--CCc--c--c-cCCCCcccEEEECC
Confidence 57899999999999 99998842 221 1 2 47999999999987
No 113
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=97.96 E-value=1.1e-05 Score=49.12 Aligned_cols=48 Identities=10% Similarity=0.115 Sum_probs=39.2
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC-hhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR-PDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||+|++++.+|+++ ++|+.+.++-... .+++.+ .++.+.||++..+|
T Consensus 9 ~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~-~~~~~~vP~~~~~~ 58 (74)
T TIGR02196 9 WCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLK-VLGQRGVPVIVIGH 58 (74)
T ss_pred CChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHH-HhCCCcccEEEECC
Confidence 699999999999999 9999877763322 246777 69999999999887
No 114
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=97.82 E-value=2.8e-05 Score=47.89 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=38.0
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC-hhhHhhhcC-CCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR-PDWYKMKVY-LANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~~~~~~~~n-P~g~vPvL~~~~ 49 (170)
+||+|++++-.|++. ++|+.+.++-... .+++.+ +| +...||+++.+|
T Consensus 9 ~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~-~~~~~~~vP~i~~~~ 59 (77)
T TIGR02200 9 WCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVS-VNNGNMTVPTVKFAD 59 (77)
T ss_pred CChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHH-HhCCCceeCEEEECC
Confidence 699999999999999 9999877764332 256666 77 999999997543
No 115
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=97.76 E-value=4.3e-05 Score=47.66 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=39.5
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC-hhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR-PDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|.+++-.|+++ ++|+.+.++.... .+++.+ .+....||++..+|
T Consensus 8 ~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~-~~g~~~vP~i~i~g 57 (79)
T TIGR02181 8 YCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQ-RSGRRTVPQIFIGD 57 (79)
T ss_pred CChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHH-HhCCCCcCEEEECC
Confidence 599999999999999 9999998874321 245666 67889999999887
No 116
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=97.74 E-value=4.4e-05 Score=46.97 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=36.8
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC-hhhHhhhcCCCC-CcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR-PDWYKMKVYLAN-KMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~~~~~~~~nP~g-~vPvL~~~~ 49 (170)
.||||.+++-+|+++ ++|+.+.++.... .+++.+ ..... +||++..+|
T Consensus 9 ~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~-~~~~~~~vP~v~i~g 59 (75)
T cd03418 9 NCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMIN-RSGGRRTVPQIFIGD 59 (75)
T ss_pred CChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHH-HhCCCCccCEEEECC
Confidence 599999999999999 9999988874311 134544 34554 899999887
No 117
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.63 E-value=0.00014 Score=47.63 Aligned_cols=48 Identities=10% Similarity=-0.029 Sum_probs=39.1
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCCh----hhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRP----DWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~----~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||.++.-+|... ++|+.+++|..... +.+.+ ++...+||++..+|
T Consensus 17 ~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~-~tg~~tvP~Vfi~g 69 (99)
T TIGR02189 17 SCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSR-LGCSPAVPAVFVGG 69 (99)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHH-hcCCCCcCeEEECC
Confidence 699999999999999 99999999854321 24555 67889999998887
No 118
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=97.61 E-value=4.1e-05 Score=45.22 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=39.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCC-ChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQN-RPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~-~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|.+++-.|+.+ ++|+.+.++... ..+++.+ .+...++|++..||
T Consensus 8 ~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~-~~g~~~~P~v~i~g 57 (60)
T PF00462_consen 8 GCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKE-LSGVRTVPQVFIDG 57 (60)
T ss_dssp TSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHH-HHSSSSSSEEEETT
T ss_pred CCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHH-HcCCCccCEEEECC
Confidence 499999999999999 999999888543 2356766 67889999998775
No 119
>PHA03050 glutaredoxin; Provisional
Probab=97.56 E-value=0.0002 Score=47.71 Aligned_cols=48 Identities=15% Similarity=0.284 Sum_probs=39.2
Q ss_pred CCchhHHHHHHHhcc-c---CccEEecCC-CCCh---hhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-E---KIKLVPIDL-QNRP---DWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i---~~e~~~v~~-~~~~---~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||.+++-+|... + +|+.++++- .+.+ .++.+ ++...+||.+..+|
T Consensus 22 ~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~-~tG~~tVP~IfI~g 77 (108)
T PHA03050 22 TCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQ-ITGGRTVPRIFFGK 77 (108)
T ss_pred CChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHH-HcCCCCcCEEEECC
Confidence 599999999999999 8 799888884 2222 46766 78888999998887
No 120
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.45 E-value=0.0002 Score=46.75 Aligned_cols=48 Identities=13% Similarity=0.026 Sum_probs=37.5
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCCh-hhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRP-DWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~-~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||.+++-+|... ++|+.+.++-.... .++.+ ++...+||.+..+|
T Consensus 26 ~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~-~tg~~tvP~vfi~g 75 (97)
T TIGR00365 26 QCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKE-YSNWPTIPQLYVKG 75 (97)
T ss_pred CCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHH-HhCCCCCCEEEECC
Confidence 499999999999999 99998777522111 35555 67888999998887
No 121
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.38 E-value=0.00027 Score=45.38 Aligned_cols=48 Identities=17% Similarity=0.063 Sum_probs=38.4
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCCh-hhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRP-DWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~-~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||.+++-+|+.. ++|+.+.++-.... .++.+ .+...++|++..+|
T Consensus 22 ~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~-~~g~~tvP~vfi~g 71 (90)
T cd03028 22 RCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKE-YSNWPTFPQLYVNG 71 (90)
T ss_pred CCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHH-HhCCCCCCEEEECC
Confidence 599999999999999 99999988643211 45555 67888999998887
No 122
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=97.24 E-value=0.00072 Score=41.71 Aligned_cols=41 Identities=20% Similarity=0.202 Sum_probs=33.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||+|.++.+.|... ++|+++..+- + . .+|.|++|+|+++|
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~n----~---~-~sp~gkLP~l~~~~ 56 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSNN----P---W-RSPTGKLPALLTSG 56 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecCC----C---C-CCCCCccCEEEECC
Confidence 589999999999999 9998874331 1 3 48999999999987
No 123
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=97.17 E-value=0.001 Score=41.40 Aligned_cols=48 Identities=19% Similarity=0.280 Sum_probs=39.4
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCCh----hhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRP----DWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~----~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|.+++-+|.+. ++|+.++++..... ..+.+ ++...++|++..+|
T Consensus 9 ~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~g~~~~P~v~~~g 61 (82)
T cd03419 9 YCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQE-LTGQRTVPNVFIGG 61 (82)
T ss_pred CCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHH-HhCCCCCCeEEECC
Confidence 599999999999999 99999999865432 23545 67888999998877
No 124
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.12 E-value=0.0013 Score=41.03 Aligned_cols=48 Identities=19% Similarity=0.305 Sum_probs=38.4
Q ss_pred CCchhHHHHHHHhcc-cC--ccEEecCCCCCh----hhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EK--IKLVPIDLQNRP----DWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~--~e~~~v~~~~~~----~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||.+++-+|+.. ++ |+.+.++..... +.+.+ .+...++|++..+|
T Consensus 8 ~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~-~~g~~~vP~v~i~g 62 (84)
T TIGR02180 8 YCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEE-ITGQRTVPNIFING 62 (84)
T ss_pred CChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHH-HhCCCCCCeEEECC
Confidence 699999999999999 98 999998865333 23444 56778999998887
No 125
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.94 E-value=0.029 Score=43.78 Aligned_cols=63 Identities=17% Similarity=0.212 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccc-ccCCCChHHHHHHHHh
Q 036672 82 EARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKY-DITAGRPQLATWIEEM 147 (170)
Q Consensus 82 ~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~r~ 147 (170)
...+++..|++.|. .++|++|| +|-.|+.++..+..+-...-+.... .....+++|-++.+++
T Consensus 167 ~Aska~~~LS~~Lg---s~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i 231 (313)
T KOG3028|consen 167 DASKALNLLSTLLG---SKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERI 231 (313)
T ss_pred HHHHHHHHHHHHhc---CceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHH
Confidence 34577888888885 67999999 9999999999888743221111111 0112389999999887
No 126
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=96.89 E-value=0.0019 Score=40.83 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=35.2
Q ss_pred CCchhHHHHHHHhc-----c-cCccEEecCCCCC-hhhHhhhcCC--CCCcceEecCC
Q 036672 1 MCPYAQRVWITRNC-----K-EKIKLVPIDLQNR-PDWYKMKVYL--ANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~-----k-i~~e~~~v~~~~~-~~~~~~~~nP--~g~vPvL~~~~ 49 (170)
.||||.+++-.|++ . ++|+.+.++-... .+++.+ ... ...||++..+|
T Consensus 10 ~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~-~~~~~~~~vP~ifi~g 66 (85)
T PRK11200 10 GCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEK-TVGKPVETVPQIFVDQ 66 (85)
T ss_pred CChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHH-HHCCCCCcCCEEEECC
Confidence 59999999999999 7 8888887774321 234444 333 36899998887
No 127
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.87 E-value=0.0041 Score=42.83 Aligned_cols=60 Identities=20% Similarity=0.339 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchH
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEA 151 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~ 151 (170)
+++...|..||..+. .+.-.++ +|+-||.++|.|.-+-.. ++...+ |++.+|+++| +...
T Consensus 62 ~~l~~~L~~Le~ll~----~~~~~n~~LS~dDi~lFp~LR~Ltiv----kgi~~P---~~V~~Y~~~~s~~t~ 123 (132)
T PF04399_consen 62 AELNADLEELEPLLA----SPNAVNGELSIDDIILFPILRSLTIV----KGIQWP---PKVRAYMDRMSKATG 123 (132)
T ss_dssp HHHHHHHHHHHHH-S----CTTBTTSS--HHHHHHHHHHHHHCTC----TTS------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc----cccccCCCCCHHHHHHHHHHhhhhhc----cCCcCC---HHHHHHHHHHHHHcC
Confidence 677888899999996 3344454 999999999999977654 344332 7999999999 6543
No 128
>PRK10824 glutaredoxin-4; Provisional
Probab=96.58 E-value=0.0036 Score=42.10 Aligned_cols=48 Identities=13% Similarity=0.055 Sum_probs=38.6
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC-hhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR-PDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||.++.-+|... ++|+.++++-... ...+.+ ++...+||-+-.+|
T Consensus 29 ~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~-~sg~~TVPQIFI~G 78 (115)
T PRK10824 29 SCGFSAQAVQALSACGERFAYVDILQNPDIRAELPK-YANWPTFPQLWVDG 78 (115)
T ss_pred CCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHH-HhCCCCCCeEEECC
Confidence 599999999999999 9999887764321 145666 68889999998887
No 129
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.50 E-value=0.0094 Score=40.77 Aligned_cols=59 Identities=14% Similarity=0.192 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cch
Q 036672 81 NEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNE 150 (170)
Q Consensus 81 ~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p 150 (170)
+++...|..++..+.. +-..++ +|+-||.++|+|.-+-.. ++...+ |++.+|+++| +..
T Consensus 63 ~~l~~~L~~l~~ll~~----~~~~n~~ls~DDi~lFp~LR~Lt~v----kgi~~P---~~V~~Y~~~~s~~t 123 (128)
T cd03199 63 AALNALLEELDPLILS----SEAVNGQLSTDDIILFPILRNLTLV----KGLVFP---PKVKAYLERMSALT 123 (128)
T ss_pred HHHHHHHHHHHHHHcC----ccccCCcCCHHHHHHHHHHhhhhhh----cCCCCC---HHHHHHHHHHHHHh
Confidence 6677888889998852 223455 999999999999977654 344332 7999999999 653
No 130
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=96.25 E-value=0.01 Score=37.62 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=31.7
Q ss_pred CCchhHHHHHHHhcc-cC---ccEEecCCCC-C--hhhHhhhcCCC--CCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EK---IKLVPIDLQN-R--PDWYKMKVYLA--NKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~---~e~~~v~~~~-~--~~~~~~~~nP~--g~vPvL~~~~ 49 (170)
.||||.+++-+|+.. ++ ++...+|... . .+++.+ .... ..||++..+|
T Consensus 9 ~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~-~~g~~~~tVP~ifi~g 65 (86)
T TIGR02183 9 GCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEK-TVGKPVETVPQIFVDE 65 (86)
T ss_pred CCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHH-HhCCCCCCcCeEEECC
Confidence 599999999999987 53 3444444432 1 234544 3333 6899998877
No 131
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=96.20 E-value=0.016 Score=38.24 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=38.6
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCCh----hhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRP----DWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~----~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||+++.-+|... +++.++++|-.... ..+.+ +.-..+||.+-.+|
T Consensus 23 ~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~-~tg~~tvP~vFI~G 75 (104)
T KOG1752|consen 23 SCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKK-LTGQRTVPNVFIGG 75 (104)
T ss_pred cCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHH-hcCCCCCCEEEECC
Confidence 699999999999999 99999999954322 23444 67777999998887
No 132
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=95.76 E-value=0.016 Score=47.56 Aligned_cols=49 Identities=8% Similarity=0.091 Sum_probs=35.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCChhhH-hh-------hcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNRPDWY-KM-------KVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~~~~~-~~-------~~nP~g~vPvL~~~~ 49 (170)
.||||.++.-+|..+ |+|+.+.++-.....++ .+ ..+...+||++..||
T Consensus 11 ~Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~ 68 (410)
T PRK12759 11 NCPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHIRTVPQIFVGD 68 (410)
T ss_pred CCHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCCCccCeEEECC
Confidence 599999999999999 99999888722211222 12 024667899998887
No 133
>PTZ00062 glutaredoxin; Provisional
Probab=95.25 E-value=0.03 Score=41.49 Aligned_cols=48 Identities=19% Similarity=0.110 Sum_probs=37.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC-hhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR-PDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||+++.-+|... ++|+...++-... .+.+.+ .+...+||.+..+|
T Consensus 127 ~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~-~sg~~TvPqVfI~G 176 (204)
T PTZ00062 127 FCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKV-YSNWPTYPQLYVNG 176 (204)
T ss_pred CChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHH-HhCCCCCCeEEECC
Confidence 599999999999999 9999777763211 145556 67788999998887
No 134
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=95.08 E-value=0.036 Score=38.91 Aligned_cols=48 Identities=8% Similarity=0.015 Sum_probs=36.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCCCC-hhhHhhhcCC----CCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQNR-PDWYKMKVYL----ANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~~~-~~~~~~~~nP----~g~vPvL~~~~ 49 (170)
.||||.+++-+|+.+ ++|+.+.|+.... .+++.+ +.. ..+||.+..+|
T Consensus 15 t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~-~~g~~~~~~tvPqVFI~G 68 (147)
T cd03031 15 TFEDCNNVRAILESFRVKFDERDVSMDSGFREELRE-LLGAELKAVSLPRVFVDG 68 (147)
T ss_pred cChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHH-HhCCCCCCCCCCEEEECC
Confidence 489999999999999 9999887764321 245555 433 37899998887
No 135
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=94.06 E-value=0.11 Score=30.70 Aligned_cols=47 Identities=26% Similarity=0.338 Sum_probs=31.5
Q ss_pred CCchhHHHHHHHhcc-c---CccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-E---KIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i---~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||+|.++.-.|++. . .++...+|....++ ..+ -.....+|++..+|
T Consensus 10 ~C~~C~~~~~~l~~l~~~~~~i~~~~id~~~~~~-l~~-~~~i~~vPti~i~~ 60 (67)
T cd02973 10 TCPYCPDAVQAANRIAALNPNISAEMIDAAEFPD-LAD-EYGVMSVPAIVING 60 (67)
T ss_pred CCCCcHHHHHHHHHHHHhCCceEEEEEEcccCHh-HHH-HcCCcccCEEEECC
Confidence 699999999988764 2 35555666544333 434 24556799998776
No 136
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=93.50 E-value=0.23 Score=30.47 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=31.6
Q ss_pred CCchhHHHHHHHhcc-cC---ccEEecCCCCChhhHhhhcCCCCCcceEec-CC
Q 036672 1 MCPYAQRVWITRNCK-EK---IKLVPIDLQNRPDWYKMKVYLANKMPSLEH-NN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~---~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~-~~ 49 (170)
++|=|-.+.+.|... .+ ++++..+- + . ++|.|++|+|.+ ++
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~n----~---~-~Sptg~LP~L~~~~~ 58 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSNN----P---W-LSPTGELPALIDSGG 58 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcCC----C---C-cCCCCCCCEEEECCC
Confidence 367788888999888 88 77776542 1 2 589999999999 54
No 137
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=93.42 E-value=0.23 Score=30.93 Aligned_cols=45 Identities=13% Similarity=0.265 Sum_probs=35.6
Q ss_pred CchhHHHHHHHhcc---cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 2 CPYAQRVWITRNCK---EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 2 ~P~~~rvr~~L~~k---i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
|+.|..+.-+|+.. .++++..+|+.+.++++.+ .+ ..||||..+|
T Consensus 10 C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~l~~~-Y~--~~IPVl~~~~ 57 (81)
T PF05768_consen 10 CHLCDEAKEILEEVAAEFPFELEEVDIDEDPELFEK-YG--YRIPVLHIDG 57 (81)
T ss_dssp SHHHHHHHHHHHHCCTTSTCEEEEEETTTTHHHHHH-SC--TSTSEEEETT
T ss_pred CChHHHHHHHHHHHHhhcCceEEEEECCCCHHHHHH-hc--CCCCEEEEcC
Confidence 88999999999854 6788888888776676655 44 4899998877
No 138
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=92.87 E-value=0.18 Score=28.10 Aligned_cols=48 Identities=21% Similarity=0.219 Sum_probs=30.9
Q ss_pred CCchhHHHHHHHh-----cc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRN-----CK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~-----~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||+|++++..+. .. +.+..+.++.......... .++.+.+|+++..+
T Consensus 8 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~~~~~~ 61 (69)
T cd01659 8 WCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKELK-RYGVGGVPTLVVFG 61 (69)
T ss_pred CChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHHH-hCCCccccEEEEEe
Confidence 5899999999998 33 5555444443332222224 47889999987643
No 139
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=91.27 E-value=0.55 Score=28.65 Aligned_cols=47 Identities=19% Similarity=0.316 Sum_probs=33.0
Q ss_pred CCchhHHHHHHHhcc-----cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-----EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-----i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||+|..+.-.|+.. ..+++..+|....++.. + -.....+|++..+|
T Consensus 10 ~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~~~-~-~~~v~~vPt~~~~g 61 (82)
T TIGR00411 10 TCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQKA-M-EYGIMAVPAIVING 61 (82)
T ss_pred CCcchHHHHHHHHHHHHHhcCceEEEEEeCccCHHHH-H-HcCCccCCEEEECC
Confidence 699999998888643 33666778865544433 3 25667899998876
No 140
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=91.00 E-value=0.18 Score=33.57 Aligned_cols=25 Identities=8% Similarity=-0.005 Sum_probs=22.5
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDL 25 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~ 25 (170)
.||+|++++-.|+++ ++|+.+.+.-
T Consensus 8 ~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (111)
T cd03036 8 KCSTCRKAKKWLDEHGVDYTAIDIVE 33 (111)
T ss_pred CCHHHHHHHHHHHHcCCceEEecccC
Confidence 499999999999999 9999888763
No 141
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=89.40 E-value=0.39 Score=40.51 Aligned_cols=87 Identities=18% Similarity=0.188 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhccCCHHHHHHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhccccc
Q 036672 53 NKREFAEELFSYTDTFNKTARSSLEGDGNEARVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKY 131 (170)
Q Consensus 53 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~ 131 (170)
..+++++.|..+... ....++...+..++..|. -..||+|. +|+||++++..+.--.... ...
T Consensus 73 ~d~~~vd~w~~~s~~----------~~~~~~s~~~~~ld~~l~---~~t~lvg~sls~Ad~aiw~~l~~n~~~~---~~l 136 (712)
T KOG1147|consen 73 IDRSQVDHWVSFSST----------FSFDEISSSLSELDKFLV---LRTFLVGNSLSIADFAIWGALHSNGMRQ---EQL 136 (712)
T ss_pred ccHHHHHHHHHHhhh----------cchHHHHHHHHHHHhhhh---HHHHhhccchhHHHHHHHHHHhcccchH---HHH
Confidence 345556666555433 123567788899999996 56899999 9999999998877421110 001
Q ss_pred ccCCCChHHHHHHHHh-cchHHHHH
Q 036672 132 DITAGRPQLATWIEEM-KNEAFNQT 155 (170)
Q Consensus 132 ~~~~~~p~l~~w~~r~-~~p~~~~~ 155 (170)
.....+.++.+|++-. ..++.+.+
T Consensus 137 k~~k~~~~v~Rw~~~~~~~~a~~~v 161 (712)
T KOG1147|consen 137 KAKKDYQNVERWYDLPEFQEAHNKV 161 (712)
T ss_pred HhhCCchhhhhhcCcHhHHHHHHHH
Confidence 1124578999999943 44444333
No 142
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=89.11 E-value=1.2 Score=27.24 Aligned_cols=44 Identities=7% Similarity=-0.065 Sum_probs=30.0
Q ss_pred CCchhHHHHH----HHhcc-cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWI----TRNCK-EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~----~L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||.|..+.= ++++. .+++++.+| .+++..+ .-...+|++..+|
T Consensus 9 ~C~~C~~~~~~~~~~~~e~~~~~~~~~v~---~~~~a~~--~~v~~vPti~i~G 57 (76)
T TIGR00412 9 GCANCQMTEKNVKKAVEELGIDAEFEKVT---DMNEILE--AGVTATPGVAVDG 57 (76)
T ss_pred CCcCHHHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHH--cCCCcCCEEEECC
Confidence 6999998854 44555 667777776 2333333 4678899998877
No 143
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=88.79 E-value=0.65 Score=30.30 Aligned_cols=24 Identities=4% Similarity=0.047 Sum_probs=22.1
Q ss_pred CCchhHHHHHHHhcc-cCccEEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
.||+|++++-.|+++ ++|+.+.+.
T Consensus 8 ~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 8 NCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CCHHHHHHHHHHHHcCCCcEEEeec
Confidence 499999999999999 999988876
No 144
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=88.73 E-value=1.1 Score=27.45 Aligned_cols=45 Identities=24% Similarity=0.307 Sum_probs=28.6
Q ss_pred CchhHHHHHHHhcc---cCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 2 CPYAQRVWITRNCK---EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 2 ~P~~~rvr~~L~~k---i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
||+|.++.-++++. ...+...++.. ..++. .+ .....+|++..+|
T Consensus 10 C~~C~~~~~~~~~~~~~~~i~~ei~~~~-~~~~~-~~-ygv~~vPalvIng 57 (76)
T PF13192_consen 10 CPYCPELVQLLKEAAEELGIEVEIIDIE-DFEEI-EK-YGVMSVPALVING 57 (76)
T ss_dssp CTTHHHHHHHHHHHHHHTTEEEEEEETT-THHHH-HH-TT-SSSSEEEETT
T ss_pred CCCcHHHHHHHHHHHHhcCCeEEEEEcc-CHHHH-HH-cCCCCCCEEEECC
Confidence 99999888877655 33333333432 33444 42 7889999999988
No 145
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=88.35 E-value=0.99 Score=29.02 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=31.1
Q ss_pred hHHHHHHHhcc-cCccEEecCCCCCh-hhHhhhcCC----CCCcceEecCC
Q 036672 5 AQRVWITRNCK-EKIKLVPIDLQNRP-DWYKMKVYL----ANKMPSLEHNN 49 (170)
Q Consensus 5 ~~rvr~~L~~k-i~~e~~~v~~~~~~-~~~~~~~nP----~g~vPvL~~~~ 49 (170)
|++|+.+|+.+ |+|+.+.|+..... +|+.+ ..+ ...||-+-.+|
T Consensus 19 ~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~-~~~~~~g~~tvPQIFi~~ 68 (92)
T cd03030 19 QQEVLGFLEAKKIEFEEVDISMNEENRQWMRE-NVPNENGKPLPPQIFNGD 68 (92)
T ss_pred HHHHHHHHHHCCCceEEEecCCCHHHHHHHHH-hcCCCCCCCCCCEEEECC
Confidence 67889999999 99998888753322 46655 333 47899776655
No 146
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=86.58 E-value=1.2 Score=28.32 Aligned_cols=47 Identities=19% Similarity=-0.003 Sum_probs=32.8
Q ss_pred CCchhHHHHHHHhcc-c---CccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-E---KIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i---~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||||..+.-++++. . .++...+|....++.. + -..-..+|+++.+|
T Consensus 23 ~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~~~~e~a-~-~~~V~~vPt~vidG 73 (89)
T cd03026 23 SCHNCPDVVQALNLMAVLNPNIEHEMIDGALFQDEV-E-ERGIMSVPAIFLNG 73 (89)
T ss_pred CCCCcHHHHHHHHHHHHHCCCceEEEEEhHhCHHHH-H-HcCCccCCEEEECC
Confidence 599999999888766 2 3566666655544444 3 25777899998877
No 147
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=86.17 E-value=1.1 Score=30.77 Aligned_cols=24 Identities=8% Similarity=-0.092 Sum_probs=21.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
.||+|++++-.|+++ ++|+.+.+.
T Consensus 9 ~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 9 SCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred CChHHHHHHHHHHHcCCCcEEeecc
Confidence 499999999999999 999988775
No 148
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=85.52 E-value=0.79 Score=30.63 Aligned_cols=24 Identities=8% Similarity=0.177 Sum_probs=21.7
Q ss_pred CCchhHHHHHHHhcc-cCccEEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
.||+|++++-.|+++ ++|+.+.+.
T Consensus 8 ~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 8 NCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CCHHHHHHHHHHHHcCCceEEEecC
Confidence 499999999999999 999988775
No 149
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=84.74 E-value=1.4 Score=29.36 Aligned_cols=24 Identities=4% Similarity=-0.104 Sum_probs=21.9
Q ss_pred CCchhHHHHHHHhcc-cCccEEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
.||+|++++-.|+++ ++|+.+.+.
T Consensus 9 ~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 9 SCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred CCHHHHHHHHHHHHCCCceEEEecC
Confidence 499999999999999 999988875
No 150
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=82.48 E-value=3.1 Score=29.85 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhhhcCCCCCcccCC--CchHHHHHHHHHHHh
Q 036672 83 ARVAFHYFETPLSKFNDGPFLQGQ--FSLADIAYAPFIERC 121 (170)
Q Consensus 83 l~~~l~~le~~L~~~~~~~~l~G~--~t~AD~~l~~~l~~~ 121 (170)
-.+.+..|++.|+......|++|+ +|-+||.+++.+.-+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 456788889999731012677776 999999999888754
No 151
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.93 E-value=2.1 Score=28.91 Aligned_cols=45 Identities=24% Similarity=0.372 Sum_probs=30.0
Q ss_pred CCchhHHHHHH----Hhcc-cCccEEecCCCCChhhHhhhcCCCCC-------cceEe
Q 036672 1 MCPYAQRVWIT----RNCK-EKIKLVPIDLQNRPDWYKMKVYLANK-------MPSLE 46 (170)
Q Consensus 1 ~~P~~~rvr~~----L~~k-i~~e~~~v~~~~~~~~~~~~~nP~g~-------vPvL~ 46 (170)
|||.|.++.=+ |.+. .+..++.++.+++|-|--- -||+.+ ||+|.
T Consensus 44 WCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~Wk~p-~n~FR~d~~~lt~vPTLl 100 (128)
T KOG3425|consen 44 WCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYWKDP-ANPFRKDPGILTAVPTLL 100 (128)
T ss_pred CCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcccCC-CCccccCCCceeecceee
Confidence 79999886554 4444 6777888888888765433 345444 67764
No 152
>PRK12559 transcriptional regulator Spx; Provisional
Probab=80.16 E-value=2.5 Score=29.00 Aligned_cols=25 Identities=8% Similarity=-0.093 Sum_probs=22.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDL 25 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~ 25 (170)
.||+|+++.-.|+++ ++|+.+.+.-
T Consensus 9 ~C~~crkA~~~L~~~gi~~~~~di~~ 34 (131)
T PRK12559 9 SCASCRKAKAWLEENQIDYTEKNIVS 34 (131)
T ss_pred CChHHHHHHHHHHHcCCCeEEEEeeC
Confidence 499999999999999 9999888763
No 153
>PHA02125 thioredoxin-like protein
Probab=79.57 E-value=4.5 Score=24.49 Aligned_cols=45 Identities=13% Similarity=0.103 Sum_probs=30.1
Q ss_pred CCchhHHHHHHHhcccCccEEecCCCCChhhHhhhcCCCCCcceEecC
Q 036672 1 MCPYAQRVWITRNCKEKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHN 48 (170)
Q Consensus 1 ~~P~~~rvr~~L~~ki~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~ 48 (170)
+||.|..+.-.|+. ++++...+|.+..+ +..+ -..-..+|++..+
T Consensus 9 wC~~Ck~~~~~l~~-~~~~~~~vd~~~~~-~l~~-~~~v~~~PT~~~g 53 (75)
T PHA02125 9 WCANCKMVKPMLAN-VEYTYVDVDTDEGV-ELTA-KHHIRSLPTLVNT 53 (75)
T ss_pred CCHhHHHHHHHHHH-HhheEEeeeCCCCH-HHHH-HcCCceeCeEECC
Confidence 68889888777643 55666777754433 4444 3566789999854
No 154
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=78.42 E-value=3.4 Score=28.38 Aligned_cols=25 Identities=12% Similarity=0.051 Sum_probs=22.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDL 25 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~ 25 (170)
.||+|++++-.|+.. ++|+.+.+.-
T Consensus 9 ~C~~crkA~~~L~~~~i~~~~~d~~~ 34 (132)
T PRK13344 9 SCTSCKKAKTWLNAHQLSYKEQNLGK 34 (132)
T ss_pred CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 499999999999999 9999888763
No 155
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=72.92 E-value=5.6 Score=26.07 Aligned_cols=24 Identities=4% Similarity=0.019 Sum_probs=21.5
Q ss_pred CCchhHHHHHHHhcc-cCccEEecC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
.|+.|++++-.|++. ++|+.+.+.
T Consensus 8 ~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 8 NCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CCHHHHHHHHHHHHcCCCeEEEecc
Confidence 499999999999999 999988775
No 156
>PF06110 DUF953: Eukaryotic protein of unknown function (DUF953); InterPro: IPR010357 This family consists of several hypothetical eukaryotic proteins of unknown function that are thioredoxin-like.; PDB: 1V9W_A 1WOU_A.
Probab=71.62 E-value=1.5 Score=29.59 Aligned_cols=45 Identities=20% Similarity=0.458 Sum_probs=25.4
Q ss_pred CCchhHHHHHHHhcc---c--CccEEecCCCCChhh------HhhhcCC---CCCcceEec
Q 036672 1 MCPYAQRVWITRNCK---E--KIKLVPIDLQNRPDW------YKMKVYL---ANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k---i--~~e~~~v~~~~~~~~------~~~~~nP---~g~vPvL~~ 47 (170)
|||.|.++.-.++.. . ...++.+..++++.| |+. +| ...||+|.-
T Consensus 37 WCPDC~~aep~v~~~f~~~~~~~~lv~v~VG~r~~Wkdp~n~fR~--~p~~~l~~IPTLi~ 95 (119)
T PF06110_consen 37 WCPDCVAAEPVVEKAFKKAPENARLVYVEVGDRPEWKDPNNPFRT--DPDLKLKGIPTLIR 95 (119)
T ss_dssp SSHHHHHHHHHHHHHHHH-STTEEEEEEE---HHHHC-TTSHHHH----CC---SSSEEEE
T ss_pred ccHHHHHHHHHHHHHHHhCCCCceEEEEEcCCHHHhCCCCCCceE--cceeeeeecceEEE
Confidence 799999998777655 3 356666666665544 322 34 345899864
No 157
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=69.31 E-value=9.5 Score=25.14 Aligned_cols=45 Identities=18% Similarity=0.157 Sum_probs=30.5
Q ss_pred CCchhHHHHHHHhcc-cC---ccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK-EK---IKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~---~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
|||+|..+.-++++. -. +++..+|.... ++..+ .-....+|++..
T Consensus 33 wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~~-~~l~~-~~~v~~vPt~~i 81 (113)
T cd02975 33 GCQYCEVTKQLLEELSELSDKLKLEIYDFDED-KEKAE-KYGVERVPTTIF 81 (113)
T ss_pred CCCChHHHHHHHHHHHHhcCceEEEEEeCCcC-HHHHH-HcCCCcCCEEEE
Confidence 799999998888766 32 35556665543 34545 356788999866
No 158
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=65.06 E-value=9.7 Score=25.33 Aligned_cols=23 Identities=9% Similarity=0.149 Sum_probs=20.7
Q ss_pred CchhHHHHHHHhcc-cCccEEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
|+.|++++-.|++. ++|+++.+-
T Consensus 10 C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 10 CANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred CHHHHHHHHHHHHcCCCcEEeehh
Confidence 99999999999999 999988765
No 159
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=61.64 E-value=17 Score=24.35 Aligned_cols=25 Identities=28% Similarity=0.370 Sum_probs=16.8
Q ss_pred CCchhHHHHHHHhcc---cCccEEecCC
Q 036672 1 MCPYAQRVWITRNCK---EKIKLVPIDL 25 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k---i~~e~~~v~~ 25 (170)
+||+|+.+.=.|++. -..++..+|.
T Consensus 34 ~Cp~C~~~~P~l~~~~~~~~~~~y~vdv 61 (122)
T TIGR01295 34 TCPYCRKFSGTLSGVVAQTKAPIYYIDS 61 (122)
T ss_pred CChhHHHHhHHHHHHHHhcCCcEEEEEC
Confidence 699999988877654 3344445554
No 160
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=59.10 E-value=9 Score=28.92 Aligned_cols=57 Identities=11% Similarity=0.194 Sum_probs=42.3
Q ss_pred HHHHHHHHhhhhcCCCCCcccCC-CchHHHHHHHHHHHhhhhhhcccccccCCCChHHHHHHHHh-cchHHH
Q 036672 84 RVAFHYFETPLSKFNDGPFLQGQ-FSLADIAYAPFIERCKPFLLEAKKYDITAGRPQLATWIEEM-KNEAFN 153 (170)
Q Consensus 84 ~~~l~~le~~L~~~~~~~~l~G~-~t~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~-~~p~~~ 153 (170)
.+.++.++..|+ +.+|..|. ++-+|+.++.-+. ..+....+++..+|+.++ +.-...
T Consensus 10 ~~glk~l~~sLA---~ks~~~g~~~s~edv~vf~al~----------~ep~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLA---EKSYIEGYQLSKEDVVVFAALG----------VEPQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhh---cccCCCCCCcccccceeehhcc----------cCcchhhhhHHHHHHHHHHHHHHHH
Confidence 467889999997 78999999 9999998775443 112234567889999888 655544
No 161
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=53.95 E-value=24 Score=21.84 Aligned_cols=45 Identities=7% Similarity=0.108 Sum_probs=28.0
Q ss_pred CCchhHHHHHHHhcc-c----CccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK-E----KIKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i----~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
+|+.|++..-.|+.. - .+.+..+|....++...+ .+ ...+|++..
T Consensus 25 ~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~~~~~~~~-~~-i~~~Pt~~~ 74 (97)
T cd02984 25 WAEPCKQMNQVFEELAKEAFPSVLFLSIEAEELPEISEK-FE-ITAVPTFVF 74 (97)
T ss_pred CCHHHHHHhHHHHHHHHHhCCceEEEEEccccCHHHHHh-cC-CccccEEEE
Confidence 688888887777654 2 356666776544443333 44 455898643
No 162
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=53.11 E-value=25 Score=25.94 Aligned_cols=47 Identities=23% Similarity=0.301 Sum_probs=31.1
Q ss_pred CCchhHHHHHHHhcc-c---CccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-E---KIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i---~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+||+|..+.-+++.. . .++...+|....++ ..+ -..-..+|++..++
T Consensus 144 ~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~~~~-~~~-~~~V~~vPtl~i~~ 194 (215)
T TIGR02187 144 TCPYCPYAVLMAHKFALANDKILGEMIEANENPD-LAE-KYGVMSVPKIVINK 194 (215)
T ss_pred CCCCcHHHHHHHHHHHHhcCceEEEEEeCCCCHH-HHH-HhCCccCCEEEEec
Confidence 699999988877755 2 24445567554443 434 35667899988764
No 163
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=51.41 E-value=21 Score=30.57 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=32.0
Q ss_pred CCchhHHHHHHHhcc---cC-ccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK---EK-IKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k---i~-~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||..+.-+++.. .| ++...+|....++ ..++ .....||.++.+|
T Consensus 487 ~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~~~-~~~~-~~v~~vP~~~i~~ 537 (555)
T TIGR03143 487 SCTLCPDVVLAAQRIASLNPNVEAEMIDVSHFPD-LKDE-YGIMSVPAIVVDD 537 (555)
T ss_pred CCCCcHHHHHHHHHHHHhCCCceEEEEECcccHH-HHHh-CCceecCEEEECC
Confidence 399999988877655 22 5555556555444 4442 6788999999887
No 164
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=48.90 E-value=28 Score=22.70 Aligned_cols=21 Identities=29% Similarity=0.311 Sum_probs=15.3
Q ss_pred hHHHHHHHhcc-cCccEEecCC
Q 036672 5 AQRVWITRNCK-EKIKLVPIDL 25 (170)
Q Consensus 5 ~~rvr~~L~~k-i~~e~~~v~~ 25 (170)
.+++..+|+.+ |+|+.+.|..
T Consensus 20 q~~v~~iL~a~kI~fe~vDIa~ 41 (99)
T PF04908_consen 20 QQRVLMILEAKKIPFEEVDIAM 41 (99)
T ss_dssp HHHHHHHHHHTT--EEEEETTT
T ss_pred HHHHHHHHHHcCCCcEEEeCcC
Confidence 47889999999 9999776654
No 165
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=47.07 E-value=22 Score=30.12 Aligned_cols=47 Identities=17% Similarity=-0.036 Sum_probs=31.1
Q ss_pred CCchhHHHHHHHhcc-c---CccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-E---KIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i---~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||..+..+++.. + .++...+|...- +++.+ -.....||.+..+|
T Consensus 127 ~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~~~-~~~~~-~~~v~~VP~~~i~~ 177 (517)
T PRK15317 127 SCHNCPDVVQALNLMAVLNPNITHTMIDGALF-QDEVE-ARNIMAVPTVFLNG 177 (517)
T ss_pred CCCCcHHHHHHHHHHHHhCCCceEEEEEchhC-HhHHH-hcCCcccCEEEECC
Confidence 499999988888755 3 233444454333 34555 36778999998887
No 166
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=47.04 E-value=35 Score=22.61 Aligned_cols=46 Identities=9% Similarity=0.037 Sum_probs=24.5
Q ss_pred CCchhHHHHHHHhcc-----cCccEEecCCCCCh-hhHhhhcCCCC-CcceEec
Q 036672 1 MCPYAQRVWITRNCK-----EKIKLVPIDLQNRP-DWYKMKVYLAN-KMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-----i~~e~~~v~~~~~~-~~~~~~~nP~g-~vPvL~~ 47 (170)
||++|++..-.+... ..-+++.+++...+ +.-.. .+..| .+|++..
T Consensus 30 WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~~~~~~~~-~~~~g~~vPt~~f 82 (117)
T cd02959 30 WCGACKALKPKFAESKEISELSHNFVMVNLEDDEEPKDEE-FSPDGGYIPRILF 82 (117)
T ss_pred cCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCCCCchhhh-cccCCCccceEEE
Confidence 699999886666542 12234445443222 21223 45555 4998643
No 167
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=46.12 E-value=23 Score=29.91 Aligned_cols=47 Identities=19% Similarity=0.020 Sum_probs=31.3
Q ss_pred CCchhHHHHHHHhcc-cC---ccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EK---IKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~---~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
.||||..+..+++.. +. ++...+|...-|+ +.+ -.....||.+..+|
T Consensus 128 ~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~~~-~~~-~~~v~~VP~~~i~~ 178 (515)
T TIGR03140 128 TCQNCPDVVQALNQMALLNPNISHTMIDGALFQD-EVE-ALGIQGVPAVFLNG 178 (515)
T ss_pred CCCCCHHHHHHHHHHHHhCCCceEEEEEchhCHH-HHH-hcCCcccCEEEECC
Confidence 499999988888766 32 3444455444444 445 36777999998887
No 168
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=43.37 E-value=50 Score=20.65 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=27.2
Q ss_pred CCchhHHHHHHHhcc---c--CccEEecCCCCChhhHhhhcCCCCCcceEe
Q 036672 1 MCPYAQRVWITRNCK---E--KIKLVPIDLQNRPDWYKMKVYLANKMPSLE 46 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k---i--~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~ 46 (170)
+||.|....-.++.. . .+....+|....++ +.+ -.--..+|++.
T Consensus 24 ~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~~~~-l~~-~~~v~~vPt~~ 72 (97)
T cd02949 24 TCGPCRTLKPILNKVIDEFDGAVHFVEIDIDEDQE-IAE-AAGIMGTPTVQ 72 (97)
T ss_pred CChhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH-HHH-HCCCeeccEEE
Confidence 689999888777653 2 25566777655443 333 13446788753
No 169
>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1. TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.
Probab=41.86 E-value=44 Score=22.45 Aligned_cols=45 Identities=16% Similarity=0.257 Sum_probs=27.5
Q ss_pred CCchhHHHHHHHhcc---c--CccEEecCCCCCh------hhHhhhcCCC-C-CcceEec
Q 036672 1 MCPYAQRVWITRNCK---E--KIKLVPIDLQNRP------DWYKMKVYLA-N-KMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k---i--~~e~~~v~~~~~~------~~~~~~~nP~-g-~vPvL~~ 47 (170)
|||.|+...=+++.. . .+.++.||.++.+ ..+.. .+. . .+|++..
T Consensus 39 WC~pCr~~~P~l~~l~~~~~~~v~fv~Vdvd~~~~w~d~~~~~~~--~~~I~~~iPT~~~ 96 (119)
T cd02952 39 WCPDCVKAEPVVREALKAAPEDCVFIYCDVGDRPYWRDPNNPFRT--DPKLTTGVPTLLR 96 (119)
T ss_pred CCHhHHhhchhHHHHHHHCCCCCEEEEEEcCCcccccCcchhhHh--ccCcccCCCEEEE
Confidence 789998776666544 2 4677888875432 33433 222 3 6999754
No 170
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=41.09 E-value=55 Score=20.31 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=31.3
Q ss_pred CCchhHHHHHHHhcc-cCccEEecCCC-----------CChhhHhh-hcCCCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK-EKIKLVPIDLQ-----------NRPDWYKM-KVYLANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~~e~~~v~~~-----------~~~~~~~~-~~nP~g~vPvL~~~~ 49 (170)
.||=|.-..--|+.. ++|+.++|-.+ +..++|-+ |-|.+=-||+|..++
T Consensus 11 ~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d 72 (85)
T COG4545 11 LCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDD 72 (85)
T ss_pred cCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCC
Confidence 488888777777777 99999888532 11233322 025555689986654
No 171
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=40.63 E-value=45 Score=22.63 Aligned_cols=23 Identities=13% Similarity=0.196 Sum_probs=20.2
Q ss_pred CchhHHHHHHHhcc-cCccEEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
|.-|++++-.|++. ++|+++.+-
T Consensus 11 Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 11 CANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred CHHHHHHHHHHHHCCCCcEEEecc
Confidence 88899999999999 999988764
No 172
>PRK10026 arsenate reductase; Provisional
Probab=37.81 E-value=32 Score=23.97 Aligned_cols=23 Identities=4% Similarity=0.029 Sum_probs=20.3
Q ss_pred CchhHHHHHHHhcc-cCccEEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
|.-|++++-.|++. ++|+++.+-
T Consensus 12 Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 12 CGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred CHHHHHHHHHHHHCCCCcEEEeee
Confidence 88899999999999 999988764
No 173
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=37.52 E-value=82 Score=21.05 Aligned_cols=49 Identities=12% Similarity=0.139 Sum_probs=32.5
Q ss_pred CCchhHHHHHHHhcc----cCccEEecCCCCChhhHhhhcC-CCCCcceEecCC
Q 036672 1 MCPYAQRVWITRNCK----EKIKLVPIDLQNRPDWYKMKVY-LANKMPSLEHNN 49 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k----i~~e~~~v~~~~~~~~~~~~~n-P~g~vPvL~~~~ 49 (170)
+||.|..+.=+|... -..+++.|+.........+.+. -....|+|+.++
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RPR~~vi~llGE~~QslPvLVL~~ 76 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFPRPRQAVIALLGEANQSLPVLVLAD 76 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCCCchHHHHHHhChhccCCCEEEeCC
Confidence 699998888777655 3577778886433332322133 457789999986
No 174
>PRK10853 putative reductase; Provisional
Probab=35.82 E-value=36 Score=22.75 Aligned_cols=23 Identities=4% Similarity=0.056 Sum_probs=19.8
Q ss_pred CchhHHHHHHHhcc-cCccEEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
|.-|++++-.|++. ++|+++.+-
T Consensus 10 C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 10 CDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred CHHHHHHHHHHHHcCCCcEEeehc
Confidence 88899999999999 999977654
No 175
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=35.02 E-value=1.1e+02 Score=18.74 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=29.6
Q ss_pred CCchhHHHHHHHhcc---c--CccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK---E--KIKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k---i--~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
+||.|....=.++.. . ++.+..+|....++ +.++ ---..+|++..
T Consensus 28 ~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~-l~~~-~~v~~~Pt~~~ 77 (103)
T PF00085_consen 28 WCPPCKAFKPILEKLAKEYKDNVKFAKVDCDENKE-LCKK-YGVKSVPTIIF 77 (103)
T ss_dssp TSHHHHHHHHHHHHHHHHTTTTSEEEEEETTTSHH-HHHH-TTCSSSSEEEE
T ss_pred CCCccccccceecccccccccccccchhhhhccch-hhhc-cCCCCCCEEEE
Confidence 699999988766544 2 46777777664444 3342 45788898654
No 176
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=34.70 E-value=1e+02 Score=20.08 Aligned_cols=45 Identities=7% Similarity=-0.040 Sum_probs=29.2
Q ss_pred CCchhHHHHHHHhcc----cCccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK----EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k----i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
+||-|+.+.-.+++. -...+..+|....+. ..+ -..-..+|++..
T Consensus 33 ~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~~~~~-l~~-~~~v~~vPt~l~ 81 (113)
T cd02989 33 EFFRCKIMDKHLEILAKKHLETKFIKVNAEKAPF-LVE-KLNIKVLPTVIL 81 (113)
T ss_pred CCccHHHHHHHHHHHHHHcCCCEEEEEEcccCHH-HHH-HCCCccCCEEEE
Confidence 588888877777654 245677777655443 334 256678898754
No 177
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=33.67 E-value=42 Score=22.09 Aligned_cols=23 Identities=9% Similarity=0.052 Sum_probs=19.3
Q ss_pred CchhHHHHHHHhcc-cCccEEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
|+-|++++-.|++. ++|+.+.+-
T Consensus 9 C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 9 CSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CHHHHHHHHHHHHCCCCeEEEecc
Confidence 88889998889999 999977654
No 178
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=33.24 E-value=83 Score=20.62 Aligned_cols=12 Identities=25% Similarity=0.600 Sum_probs=8.9
Q ss_pred CCchhHHHHHHH
Q 036672 1 MCPYAQRVWITR 12 (170)
Q Consensus 1 ~~P~~~rvr~~L 12 (170)
+||+|++..-.+
T Consensus 25 wC~~C~~~~~~~ 36 (125)
T cd02951 25 GCPYCDKLKRDY 36 (125)
T ss_pred CCHHHHHHHHHh
Confidence 699999876433
No 179
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=32.21 E-value=45 Score=22.03 Aligned_cols=23 Identities=13% Similarity=0.083 Sum_probs=19.6
Q ss_pred CchhHHHHHHHhcc-cCccEEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
|+-|++++-.|++. ++|+.+.+.
T Consensus 9 C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 9 CSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CHHHHHHHHHHHHCCCCeEEEecc
Confidence 88889999999999 999977664
No 180
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=28.30 E-value=49 Score=21.52 Aligned_cols=23 Identities=4% Similarity=0.121 Sum_probs=16.8
Q ss_pred CchhHHHHHHHhcc-cCccEEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
|.-|++++-.|++. ++|+.+.+.
T Consensus 6 C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 6 CSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp -HHHHHHHHHHHHTT--EEEEETT
T ss_pred CHHHHHHHHHHHHcCCCeEeehhh
Confidence 78888999999999 999987664
No 181
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=27.65 E-value=1.1e+02 Score=23.85 Aligned_cols=41 Identities=10% Similarity=0.181 Sum_probs=30.2
Q ss_pred HHHHHHHhcccCccEEecCCCCChhhHhhhcCCCCCcceEecCC
Q 036672 6 QRVWITRNCKEKIKLVPIDLQNRPDWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 6 ~rvr~~L~~ki~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~~~ 49 (170)
+-.|++.+ +--+++.+++...++.|.. ++-..-+||++.||
T Consensus 170 ~aaRlaae--lGADIiK~~ytg~~e~F~~-vv~~~~vpVviaGG 210 (265)
T COG1830 170 YAARLAAE--LGADIIKTKYTGDPESFRR-VVAACGVPVVIAGG 210 (265)
T ss_pred HHHHHHHH--hcCCeEeecCCCChHHHHH-HHHhCCCCEEEeCC
Confidence 34455555 6677888888777788877 66665599999998
No 182
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=27.07 E-value=1.4e+02 Score=17.41 Aligned_cols=45 Identities=18% Similarity=0.326 Sum_probs=26.6
Q ss_pred CCchhHHHHHHHhcc----cCccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK----EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k----i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
+|++|+...-.+++. -.+.+..+|....+. +.. ......+|++..
T Consensus 21 ~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~v~~~P~~~~ 69 (93)
T cd02947 21 WCGPCKAIAPVLEELAEEYPKVKFVKVDVDENPE-LAE-EYGVRSIPTFLF 69 (93)
T ss_pred CChhHHHhhHHHHHHHHHCCCceEEEEECCCChh-HHH-hcCcccccEEEE
Confidence 589998888888764 224444555444333 333 245567898654
No 183
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=26.70 E-value=1.4e+02 Score=18.75 Aligned_cols=45 Identities=9% Similarity=-0.039 Sum_probs=25.8
Q ss_pred CCchhHHHHHHHh------cc-c-CccEEecCCCCC---hhhHhhhcCCCCCcceEe
Q 036672 1 MCPYAQRVWITRN------CK-E-KIKLVPIDLQNR---PDWYKMKVYLANKMPSLE 46 (170)
Q Consensus 1 ~~P~~~rvr~~L~------~k-i-~~e~~~v~~~~~---~~~~~~~~nP~g~vPvL~ 46 (170)
+||+|++..-.+. .. - .+....+|.... .+.+.+ -.....+|++.
T Consensus 22 wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~-~~~i~~~Pti~ 77 (104)
T cd02953 22 WCVTCKVNEKVVFSDPEVQAALKKDVVLLRADWTKNDPEITALLK-RFGVFGPPTYL 77 (104)
T ss_pred hhHHHHHHHHHhcCCHHHHHHHhCCeEEEEEecCCCCHHHHHHHH-HcCCCCCCEEE
Confidence 6999988764441 11 1 466667775432 134444 24566789753
No 184
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=26.68 E-value=1.2e+02 Score=18.39 Aligned_cols=45 Identities=20% Similarity=0.289 Sum_probs=25.5
Q ss_pred CCchhHHHHHHHhcc-----cCccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK-----EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-----i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
+|++|+...-.++.. -.+.+..+|....+....+ --...+|++..
T Consensus 25 ~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~--~~v~~~P~~~~ 74 (101)
T TIGR01068 25 WCGPCKMIAPILEELAKEYEGKVKFVKLNVDENPDIAAK--YGIRSIPTLLL 74 (101)
T ss_pred CCHHHHHhCHHHHHHHHHhcCCeEEEEEECCCCHHHHHH--cCCCcCCEEEE
Confidence 578887776655432 2366777776544433322 34456887543
No 185
>PRK09381 trxA thioredoxin; Provisional
Probab=26.66 E-value=1.1e+02 Score=19.30 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=27.0
Q ss_pred CCchhHHHHHHHhcc-----cCccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK-----EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-----i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
+||.|+...=.++.. -.+.+..+|....+....+ -....+|++..
T Consensus 32 ~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~~~~~~~~--~~v~~~Pt~~~ 81 (109)
T PRK09381 32 WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK--YGIRGIPTLLL 81 (109)
T ss_pred CCHHHHHHhHHHHHHHHHhCCCcEEEEEECCCChhHHHh--CCCCcCCEEEE
Confidence 588888776655543 2355666776554443333 35577998643
No 186
>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=26.42 E-value=1.3e+02 Score=19.00 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=24.7
Q ss_pred CCchhHHHHHHHhcc-c---CccEEecCCCCChhhHhhhcCCCCCcceEe
Q 036672 1 MCPYAQRVWITRNCK-E---KIKLVPIDLQNRPDWYKMKVYLANKMPSLE 46 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i---~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~ 46 (170)
|||.|+...=.+++. - .+.+..+|..+..+...+ ----..+|++.
T Consensus 29 WC~~C~~~~p~l~~la~~~~~~~~~~vd~~~~~~~l~~-~~~V~~~PT~~ 77 (100)
T cd02999 29 WCPFSASFRPHFNALSSMFPQIRHLAIEESSIKPSLLS-RYGVVGFPTIL 77 (100)
T ss_pred CCHHHHhHhHHHHHHHHHhccCceEEEECCCCCHHHHH-hcCCeecCEEE
Confidence 688888877666554 2 344555665422233333 23345678754
No 187
>PTZ00051 thioredoxin; Provisional
Probab=25.01 E-value=1.5e+02 Score=18.22 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=26.4
Q ss_pred CCchhHHHHHHHhcc----cCccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK----EKIKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k----i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
+||.|+...-.++.. .++....+|....+ .+.+ --....+|++..
T Consensus 29 ~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~~~-~~~~-~~~v~~~Pt~~~ 77 (98)
T PTZ00051 29 WCGPCKRIAPFYEECSKEYTKMVFVKVDVDELS-EVAE-KENITSMPTFKV 77 (98)
T ss_pred CCHHHHHHhHHHHHHHHHcCCcEEEEEECcchH-HHHH-HCCCceeeEEEE
Confidence 688888887666543 33556666654333 3333 235567887643
No 188
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=25.01 E-value=1.5e+02 Score=19.09 Aligned_cols=44 Identities=7% Similarity=0.048 Sum_probs=25.0
Q ss_pred CCchhHHHHHHHhcc------cCccEEecCCCCChhhHhhhcCCCCCcceEe
Q 036672 1 MCPYAQRVWITRNCK------EKIKLVPIDLQNRPDWYKMKVYLANKMPSLE 46 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k------i~~e~~~v~~~~~~~~~~~~~nP~g~vPvL~ 46 (170)
|||.|+...-.+++. ..+.+..+|....+. ... -..-..+|++.
T Consensus 35 wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~~~-l~~-~~~V~~~Pt~~ 84 (111)
T cd02963 35 WCFSCIHIEPVWKEVIQELEPLGVGIATVNAGHERR-LAR-KLGAHSVPAIV 84 (111)
T ss_pred ccHhHHHhhHHHHHHHHHHHhcCceEEEEeccccHH-HHH-HcCCccCCEEE
Confidence 577777665444433 235566677554333 333 24667889865
No 189
>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein. It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.
Probab=23.01 E-value=2.1e+02 Score=19.01 Aligned_cols=45 Identities=13% Similarity=0.141 Sum_probs=27.6
Q ss_pred CCchhHHHHHHHhcc-cC----ccEEecCCCCChhhHhhhcCCCCCcceEec
Q 036672 1 MCPYAQRVWITRNCK-EK----IKLVPIDLQNRPDWYKMKVYLANKMPSLEH 47 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k-i~----~e~~~v~~~~~~~~~~~~~nP~g~vPvL~~ 47 (170)
|||-|+...=.+++. -. ..+..||....+ ++.+ -.--..+|++..
T Consensus 25 WCgpCk~m~P~le~la~~~~~~v~f~kVDvD~~~-~la~-~~~V~~iPTf~~ 74 (114)
T cd02954 25 WDPVCMQMDEVLAKIAEDVSNFAVIYLVDIDEVP-DFNK-MYELYDPPTVMF 74 (114)
T ss_pred CChhHHHHHHHHHHHHHHccCceEEEEEECCCCH-HHHH-HcCCCCCCEEEE
Confidence 688888777777655 22 355677766544 3434 244566898654
No 190
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=22.46 E-value=71 Score=24.04 Aligned_cols=22 Identities=14% Similarity=0.161 Sum_probs=14.5
Q ss_pred CCchhHHHHHHHhcc--cCccEEe
Q 036672 1 MCPYAQRVWITRNCK--EKIKLVP 22 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k--i~~e~~~ 22 (170)
.||||+|..--+... ..++++.
T Consensus 118 ~CpyCkkl~~~l~~~~~~~v~v~~ 141 (232)
T PRK10877 118 TCGYCHKLHEQMKDYNALGITVRY 141 (232)
T ss_pred CChHHHHHHHHHHHHhcCCeEEEE
Confidence 499999998776643 3444443
No 191
>PRK06852 aldolase; Validated
Probab=22.22 E-value=1.3e+02 Score=23.79 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=26.7
Q ss_pred hHHHHHHHhcccCccEEecCCC-----CChhhHhhhcCC-CCCcceEecCC
Q 036672 5 AQRVWITRNCKEKIKLVPIDLQ-----NRPDWYKMKVYL-ANKMPSLEHNN 49 (170)
Q Consensus 5 ~~rvr~~L~~ki~~e~~~v~~~-----~~~~~~~~~~nP-~g~vPvL~~~~ 49 (170)
+..+|++.+ +--+++.+++. ..++.|.+ +.- .|.+||++.||
T Consensus 191 a~aaRiaaE--LGADIVKv~y~~~~~~g~~e~f~~-vv~~~g~vpVviaGG 238 (304)
T PRK06852 191 AGAAGVAAC--LGADFVKVNYPKKEGANPAELFKE-AVLAAGRTKVVCAGG 238 (304)
T ss_pred HHHHHHHHH--HcCCEEEecCCCcCCCCCHHHHHH-HHHhCCCCcEEEeCC
Confidence 344566666 45566666654 33456665 444 45899999998
No 192
>PF13728 TraF: F plasmid transfer operon protein
Probab=22.22 E-value=1.8e+02 Score=21.68 Aligned_cols=24 Identities=25% Similarity=0.466 Sum_probs=15.1
Q ss_pred CchhHHHHHHHhcc---cCccEEecCC
Q 036672 2 CPYAQRVWITRNCK---EKIKLVPIDL 25 (170)
Q Consensus 2 ~P~~~rvr~~L~~k---i~~e~~~v~~ 25 (170)
||||+.-.=+|... -.+++..|++
T Consensus 132 C~~C~~~~pil~~~~~~yg~~v~~vs~ 158 (215)
T PF13728_consen 132 CPYCQQQAPILQQFADKYGFSVIPVSL 158 (215)
T ss_pred CchhHHHHHHHHHHHHHhCCEEEEEec
Confidence 99998877666544 3444444444
No 193
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=21.45 E-value=1.6e+02 Score=19.68 Aligned_cols=23 Identities=4% Similarity=0.056 Sum_probs=18.3
Q ss_pred CchhHHHHHHHhcc-cCccEEecC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPID 24 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~ 24 (170)
|.-|++++-.|++. ++|+++.+-
T Consensus 11 C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 11 CSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred ChHHHHHHHHHHHcCCCcEEEEee
Confidence 66778888888888 999977654
No 194
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=20.43 E-value=2.1e+02 Score=18.20 Aligned_cols=45 Identities=13% Similarity=0.286 Sum_probs=25.6
Q ss_pred CCchhHHHHHHHhcc---c---CccEEecCCCCC-hhhHhhhcCCCCCcceEe
Q 036672 1 MCPYAQRVWITRNCK---E---KIKLVPIDLQNR-PDWYKMKVYLANKMPSLE 46 (170)
Q Consensus 1 ~~P~~~rvr~~L~~k---i---~~e~~~v~~~~~-~~~~~~~~nP~g~vPvL~ 46 (170)
|||.|++.--.++.. . .+.+..+|.... .+...+ ...-..+|++.
T Consensus 32 wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d~~~~~~~~~-~~~v~~~Pti~ 83 (109)
T cd02993 32 WCPFCQAMEASYEELAEKLAGSNVKVAKFNADGEQREFAKE-ELQLKSFPTIL 83 (109)
T ss_pred CCHHHHHHhHHHHHHHHHhccCCeEEEEEECCccchhhHHh-hcCCCcCCEEE
Confidence 688888776555433 2 355666665432 222222 34567789875
No 195
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=20.29 E-value=1.6e+02 Score=15.99 Aligned_cols=22 Identities=14% Similarity=0.351 Sum_probs=17.1
Q ss_pred hHHHHHHHHh-cchHHHHHHHhh
Q 036672 138 PQLATWIEEM-KNEAFNQTYKKR 159 (170)
Q Consensus 138 p~l~~w~~r~-~~p~~~~~~~~~ 159 (170)
..+.++++++ ++|.++.-++..
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~~~ 26 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLKAC 26 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHHhc
Confidence 4678888888 888888776654
No 196
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=20.08 E-value=2.1e+02 Score=18.82 Aligned_cols=46 Identities=15% Similarity=0.170 Sum_probs=32.1
Q ss_pred CchhHHHHHHHhcc-cCccEEecCC-CCCh--hhHhhhcCCCCCcceEecCC
Q 036672 2 CPYAQRVWITRNCK-EKIKLVPIDL-QNRP--DWYKMKVYLANKMPSLEHNN 49 (170)
Q Consensus 2 ~P~~~rvr~~L~~k-i~~e~~~v~~-~~~~--~~~~~~~nP~g~vPvL~~~~ 49 (170)
|=||.++--+|.+. . .+...+|. .+.+ +.+.+ .+-..++|=|-.+|
T Consensus 30 CGFS~~~vqiL~~~g~-v~~~~vnVL~d~eiR~~lk~-~s~WPT~PQLyi~G 79 (105)
T COG0278 30 CGFSAQAVQILSACGV-VDFAYVDVLQDPEIRQGLKE-YSNWPTFPQLYVNG 79 (105)
T ss_pred CCccHHHHHHHHHcCC-cceeEEeeccCHHHHhccHh-hcCCCCCceeeECC
Confidence 78899999999888 5 55555563 3322 34555 67888999987776
Done!