BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036673
(469 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 182/300 (60%), Gaps = 21/300 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P+ +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 64
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSG 223
+L+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL G
Sbjct: 65 ELNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPE 282
L CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPE 180
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+LLG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-- 238
Query: 343 TTTFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 239 --TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 182/300 (60%), Gaps = 21/300 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P+ +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 64
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSG 223
+L+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL G
Sbjct: 65 ELNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPE 282
L CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPE 180
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+LLG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-- 238
Query: 343 TTTFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 239 --TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 181/300 (60%), Gaps = 21/300 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSG 223
+L+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL G
Sbjct: 60 ELNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPE 282
L CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPE 175
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+LLG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-- 233
Query: 343 TTTFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 --TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 181/300 (60%), Gaps = 21/300 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSG 223
+L+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL G
Sbjct: 60 ELNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPE 282
L CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPE 175
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+LLG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-- 233
Query: 343 TTTFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 --TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 181/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 61 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+L
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEIL 176
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 232
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 181/300 (60%), Gaps = 21/300 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSG 223
+L+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL G
Sbjct: 60 ELNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPE 282
L CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPE 175
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+LLG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-- 233
Query: 343 TTTFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 --TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 181/300 (60%), Gaps = 21/300 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSG 223
+L+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL G
Sbjct: 61 ELNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPE 282
L CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPE 176
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+LLG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-- 234
Query: 343 TTTFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 235 --TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 180/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 62 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 233
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 180/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 62 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 233
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 180/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 61 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 176
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 232
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 180/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 62 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 233
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 180/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 62 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 233
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 180/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 61 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 176
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 232
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 180/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 65
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 66 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 181
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 237
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 238 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 60 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 231
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 232 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 61 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 176
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 232
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 185/310 (59%), Gaps = 17/310 (5%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDHPN 170
Y+KLAK+GQGT+ V+KAR R TG+ VALKKV + +E E A REI+ILQ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-NEKEGFPITALREIKILQLLKHEN 78
Query: 171 VIKLEGLATS------RMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGL 224
V+ L + + R + S+YLVFDF + DL ++ K T ++K MQ LL+GL
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGP--LTSRVVTLWYRAP 281
+ H ILHRD+KA+N+LI + G+LK+ADFGL+ F + K P +RVVTLWYR P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
ELLLG DYG IDLW AGC++AEM+ P+M G TE QL I +LCG+ + + W +
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 342 LTTTF-RPQHYKPSFREVFGEFP-----PSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
+ + + K R+V P + ++ LL LDPA R + AL ++FF +
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
Query: 396 SPLACDLSSL 405
P+ DL +
Sbjct: 319 DPMPSDLKGM 328
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 60 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 231
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 232 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 60 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 231
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 232 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 61 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 176
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 232
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 63 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 234
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 235 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 63
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 64 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 179
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 235
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 236 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 181/300 (60%), Gaps = 21/300 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDL-TKIICRPGQKLTEPQVKCYMQQLLSG 223
+L+HPN++KL L + LYLVF+F+ DL T + + P +K Y+ QLL G
Sbjct: 61 ELNHPNIVKL--LDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPE 282
L CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPE 176
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+LLG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-- 234
Query: 343 TTTFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 235 --TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 60 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 231
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 232 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 185/310 (59%), Gaps = 17/310 (5%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDHPN 170
Y+KLAK+GQGT+ V+KAR R TG+ VALKKV + +E E A REI+ILQ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-NEKEGFPITALREIKILQLLKHEN 78
Query: 171 VIKLEGLATS------RMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGL 224
V+ L + + R + S+YLVFDF + DL ++ K T ++K MQ LL+GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGP--LTSRVVTLWYRAP 281
+ H ILHRD+KA+N+LI + G+LK+ADFGL+ F + K P +RVVTLWYR P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
ELLLG DYG IDLW AGC++AEM+ P+M G TE QL I +LCG+ + + W +
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 342 LTTTF-RPQHYKPSFREVFGEFP-----PSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
+ + + K R+V P + ++ LL LDPA R + AL ++FF +
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
Query: 396 SPLACDLSSL 405
P+ DL +
Sbjct: 319 DPMPSDLKGM 328
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 185/310 (59%), Gaps = 17/310 (5%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDHPN 170
Y+KLAK+GQGT+ V+KAR R TG+ VALKKV + +E E A REI+ILQ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-NEKEGFPITALREIKILQLLKHEN 78
Query: 171 VIKLEGLATS------RMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGL 224
V+ L + + R + S+YLVFDF + DL ++ K T ++K MQ LL+GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGP--LTSRVVTLWYRAP 281
+ H ILHRD+KA+N+LI + G+LK+ADFGL+ F + K P +RVVTLWYR P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
ELLLG DYG IDLW AGC++AEM+ P+M G TE QL I +LCG+ + + W +
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 342 LTTTF-RPQHYKPSFREVFGEFP-----PSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
+ + + K R+V P + ++ LL LDPA R + AL ++FF +
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
Query: 396 SPLACDLSSL 405
P+ DL +
Sbjct: 319 DPMPSDLKGM 328
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 185/310 (59%), Gaps = 17/310 (5%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDHPN 170
Y+KLAK+GQGT+ V+KAR R TG+ VALKKV + +E E A REI+ILQ L H N
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-NEKEGFPITALREIKILQLLKHEN 77
Query: 171 VIKLEGLATS------RMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGL 224
V+ L + + R + S+YLVFDF + DL ++ K T ++K MQ LL+GL
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGP--LTSRVVTLWYRAP 281
+ H ILHRD+KA+N+LI + G+LK+ADFGL+ F + K P +RVVTLWYR P
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
ELLLG DYG IDLW AGC++AEM+ P+M G TE QL I +LCG+ + + W +
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 342 LTTTF-RPQHYKPSFREVFGEFP-----PSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
+ + + K R+V P + ++ LL LDPA R + AL ++FF +
Sbjct: 258 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317
Query: 396 SPLACDLSSL 405
P+ DL +
Sbjct: 318 DPMPSDLKGM 327
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 63 NHPNIVKL--LDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 234
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 235 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL
Sbjct: 61 NHPNIVKL--LDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 176
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 232
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y KL KVG+GTY VYKA+D G+IVALK++R D + REI +L++L HP
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
N++ L + S + L LVF+FM+ DL K++ L + Q+K Y+ QLL G+ HCH+
Sbjct: 80 NIVSLIDVIHS--ERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLGST 288
ILHRD+K NLLI+ G LK+ADFGL+ F IP + T VVTLWYRAP++L+GS
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSK 195
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRP 348
Y +D+WS GC+ AEM G+PL PG T+ +QL +IF + GTP+ W +++ ++
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 349 QHY----KPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ + K + + F +L+ +L DP R +A A+ + +F
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y KL KVG+GTY VYKA+D G+IVALK++R D + REI +L++L HP
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
N++ L + S + L LVF+FM+ DL K++ L + Q+K Y+ QLL G+ HCH+
Sbjct: 80 NIVSLIDVIHS--ERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLGST 288
ILHRD+K NLLI+ G LK+ADFGL+ F IP + T VVTLWYRAP++L+GS
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSK 195
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRP 348
Y +D+WS GC+ AEM G+PL PG T+ +QL +IF + GTP+ W +++ ++
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 349 QHY----KPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ + K + + F +L+ +L DP R +A A+ + +F
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 179/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VAL K+R DT E E V A REI +L++L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 62 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 177
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 233
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 179/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VAL K+R DT E E V A REI +L++L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 61 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 176
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 232
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 179/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 61 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLG 176
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 232
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 179/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 63 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+LLG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLG 178
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 234
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 235 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 179/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+F+ DL K + + P +K Y+ QLL GL C
Sbjct: 61 PNIVKL--LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLG 176
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 232
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 180/300 (60%), Gaps = 21/300 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSG 223
+L+HPN++KL L + LYLVF+ + DL K + + P +K Y+ QLL G
Sbjct: 61 ELNHPNIVKL--LDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPE 282
L CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPE 176
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+LLG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-- 234
Query: 343 TTTFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 235 --TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 179/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL + + P +K Y+ QLL GL
Sbjct: 60 NHPNIVKL--LDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 175
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 231
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 232 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 179/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL + + P +K Y+ QLL GL
Sbjct: 62 NHPNIVKL--LDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 177
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 233
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 234 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 179/298 (60%), Gaps = 21/298 (7%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKL 166
S +++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQ 225
+HPN++KL L + LYLVF+F+ DL + + P +K Y+ QLL GL
Sbjct: 63 NHPNIVKL--LDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELL 284
CH +LHRD+K NLLI+ G +K+ADFGL+ F +P + VVTLWYRAPE+L
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEIL 178
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
LG Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV---- 234
Query: 345 TFRPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
T P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 235 TSMPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 179/296 (60%), Gaps = 21/296 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQKLDH 168
+++ K+ K+G+GTY VYKAR++ TG++VALKK+R DT E E V A REI +L++L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDL-TKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN++KL L + LYLVF+ + DL T + + P +K Y+ QLL GL C
Sbjct: 61 PNIVKL--LDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H +LHRD+K NLLI+ G +K+ADFGL+ F +P + T VVTLWYRAPE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLG 176
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
Y +D+WS GC+ AEM R L PG +E++QL RIF+ GTP E W + T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV----TS 232
Query: 347 RPQHYKPSF----REVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFFN 394
P YKPSF R+ F + P +L+ +L DP R +A +AL + FF
Sbjct: 233 MPD-YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 181/299 (60%), Gaps = 10/299 (3%)
Query: 105 VPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFD--TSEPESVKFMA-REIR 161
V A Y+KL +G+G ++ VYKARD++T +IVA+KK++ + + + A REI+
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 162 ILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+LQ+L HPN+I L L + ++ LVFDFM++DL II LT +K YM L
Sbjct: 65 LLQELSHPNIIGL--LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
GL++ H+ ILHRD+K +NLL+D++G+LK+ADFGL+ F + +VVT WYRAP
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA-YXHQVVTRWYRAP 181
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM- 340
ELL G+ YGVG+D+W+ GC+LAE+ + P +PG ++++QL RIF+ GTP+E+ W M
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241
Query: 341 --KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASP 397
TF+ P +F ++ L +P R TA AL+ ++F+ P
Sbjct: 242 SLPDYVTFKSFPGIP-LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 176/290 (60%), Gaps = 13/290 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L K+G+GTY VYKA++ + G+ ALKK+R + + REI IL++L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI--ICRPGQKLTEPQVKCYMQQLLSGLQHC 227
N++KL + ++ + L LVF+ + DL K+ +C G L K ++ QLL+G+ +C
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYC 116
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H+R +LHRD+K NLLI++ G LKIADFGL+ F IP +K T VVTLWYRAP++L+G
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEVVTLWYRAPDVLMG 174
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
S Y ID+WS GC+ AEM G PL PG +E +QL RIF++ GTP+ W + +
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 347 RPQH--YKPSFREVFGE-FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
P Y+P E F + S +L+ +L LDP R TA AL++ +F
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 176/290 (60%), Gaps = 13/290 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L K+G+GTY VYKA++ + G+ ALKK+R + + REI IL++L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI--ICRPGQKLTEPQVKCYMQQLLSGLQHC 227
N++KL + ++ + L LVF+ + DL K+ +C G L K ++ QLL+G+ +C
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYC 116
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H+R +LHRD+K NLLI++ G LKIADFGL+ F IP +K T VVTLWYRAP++L+G
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEVVTLWYRAPDVLMG 174
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
S Y ID+WS GC+ AEM G PL PG +E +QL RIF++ GTP+ W + +
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 347 RPQH--YKPSFREVFGE-FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
P Y+P E F + S +L+ +L LDP R TA AL++ +F
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 176/290 (60%), Gaps = 13/290 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L K+G+GTY VYKA++ + G+ ALKK+R + + REI IL++L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI--ICRPGQKLTEPQVKCYMQQLLSGLQHC 227
N++KL + ++ + L LVF+ + DL K+ +C G L K ++ QLL+G+ +C
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYC 116
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLG 286
H+R +LHRD+K NLLI++ G LKIADFGL+ F IP +K T +VTLWYRAP++L+G
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMG 174
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
S Y ID+WS GC+ AEM G PL PG +E +QL RIF++ GTP+ W + +
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 347 RPQH--YKPSFREVFGE-FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
P Y+P E F + S +L+ +L LDP R TA AL++ +F
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 172/288 (59%), Gaps = 9/288 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y+KL K+G+GTY V+KA++R+T +IVALK+VR D + REI +L++L H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
++L + S + L LVF+F DL K L VK ++ QLL GL CH R
Sbjct: 64 VRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRD+K NLLI+++G LK+A+FGL+ F IP + ++ VVTLWYR P++L G+ Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLY 179
Query: 291 GVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
ID+WSAGC+ AE+ GRPL PG +QL RIF+L GTP+E+ W M ++P
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 350 HYKP---SFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
P S V + + +L LL +P R +A ALQ+ +F+
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 171/288 (59%), Gaps = 9/288 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y+KL K+G+GTY V+KA++R+T +IVALK+VR D + REI +L++L H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
++L + S + L LVF+F DL K L VK ++ QLL GL CH R
Sbjct: 64 VRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRD+K NLLI+++G LK+ADFGL+ F IP + ++ VVTLWYR P++L G+ Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLY 179
Query: 291 GVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
ID+WSAGC+ AE+ RPL PG +QL RIF+L GTP+E+ W M ++P
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 350 HYKP---SFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
P S V + + +L LL +P R +A ALQ+ +F+
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 172/290 (59%), Gaps = 12/290 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
++Y KL K+G+GTY+ VYK + + T +VALK++R + E + RE+ +L+ L H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHA 60
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
N++ L + + + SL LVF+++ DL + + G + VK ++ QLL GL +CH
Sbjct: 61 NIVTLHDIIHT--EKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNF-FIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ +LHRD+K NLLI++ G LK+ADFGL+ IP + + VVTLWYR P++LLGST
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT--YDNEVVTLWYRPPDILLGST 176
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRP 348
DY ID+W GC+ EM GRPL PG T EQLH IF++ GTP+E+ W + F+
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236
Query: 349 QHYKPSFR-EVFGEFPP----SSYGILTTLLALDPAYRGTAASALQNEFF 393
+Y P +R E P +LT LL + R +A A+++ FF
Sbjct: 237 YNY-PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 169/300 (56%), Gaps = 19/300 (6%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S+ + +L K+G GTY+ VYK ++ TG VALK+V+ D SE + REI ++++L
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLD-SEEGTPSTAIREISLMKELK 61
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTK-----IICRPGQKLTEPQVKCYMQQLLS 222
H N+++L + + + L LVF+FM +DL K + + L VK + QLL
Sbjct: 62 HENIVRLYDVIHT--ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAP 281
GL CHE ILHRD+K NLLI+K G LK+ DFGL+ F IP +S VVTLWYRAP
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAP 177
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
++L+GS Y ID+WS GC+LAEM G+PL PG + EQL IF + GTP+E W +
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSS--------YGILTTLLALDPAYRGTAASALQNEFF 393
+ P + R++ P + L LL L+P R +A AL + +F
Sbjct: 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 173/297 (58%), Gaps = 15/297 (5%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S D Y ++ K+G+GTY VYKA D T + VA+K++R + E RE+ +L++L
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
H N+I+L+ + + L+L+F++ ++DL K + + ++ +K ++ QL++G+ C
Sbjct: 92 HRNIIELKSVI--HHNHRLHLIFEYAENDLKKYMDK-NPDVSMRVIKSFLYQLINGVNFC 148
Query: 228 HERGILHRDIKASNLLIDKSG-----MLKIADFGLSNFF-IPKQKGPLTSRVVTLWYRAP 281
H R LHRD+K NLL+ S +LKI DFGL+ F IP ++ T ++TLWYR P
Sbjct: 149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ--FTHEIITLWYRPP 206
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E+LLGS Y +D+WS C+ AEM + PL PG +E++QL +IF++ G P + W +
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266
Query: 342 LTTTFR---PQHYKPSFREVFG-EFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
++ P+ + + V G +LT +L +DP R +A +AL++ +F+
Sbjct: 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 165/296 (55%), Gaps = 13/296 (4%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ Y+ +A++G G Y VYKARD +G VALK VR E RE+ +L++L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 168 ---HPNVIKLEGL-ATSRM--QYSLYLVFDFMQSDLTKIICR-PGQKLTEPQVKCYMQQL 220
HPNV++L + ATSR + + LVF+ + DL + + P L +K M+Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 221 LSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRA 280
L GL H I+HRD+K N+L+ G +K+ADFGL+ + + L VVTLWYRA
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYRA 179
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW-KK 339
PE+LL ST Y +D+WS GC+ AEMF +PL G +E +QL +IF L G P ED W +
Sbjct: 180 PEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 238
Query: 340 MKLTT-TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+ L F P+ +P + V E S +L +L +P R +A ALQ+ + +
Sbjct: 239 VSLPRGAFPPRGPRP-VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 165/296 (55%), Gaps = 13/296 (4%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ Y+ +A++G G Y VYKARD +G VALK VR E RE+ +L++L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 168 ---HPNVIKLEGL-ATSRM--QYSLYLVFDFMQSDLTKIICR-PGQKLTEPQVKCYMQQL 220
HPNV++L + ATSR + + LVF+ + DL + + P L +K M+Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 221 LSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRA 280
L GL H I+HRD+K N+L+ G +K+ADFGL+ + + L VVTLWYRA
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLWYRA 179
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW-KK 339
PE+LL ST Y +D+WS GC+ AEMF +PL G +E +QL +IF L G P ED W +
Sbjct: 180 PEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 238
Query: 340 MKLTT-TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+ L F P+ +P + V E S +L +L +P R +A ALQ+ + +
Sbjct: 239 VSLPRGAFPPRGPRP-VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 165/296 (55%), Gaps = 13/296 (4%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ Y+ +A++G G Y VYKARD +G VALK VR E RE+ +L++L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 168 ---HPNVIKLEGL-ATSRM--QYSLYLVFDFMQSDLTKIICR-PGQKLTEPQVKCYMQQL 220
HPNV++L + ATSR + + LVF+ + DL + + P L +K M+Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 221 LSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRA 280
L GL H I+HRD+K N+L+ G +K+ADFGL+ + + L VVTLWYRA
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTLWYRA 179
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW-KK 339
PE+LL ST Y +D+WS GC+ AEMF +PL G +E +QL +IF L G P ED W +
Sbjct: 180 PEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 238
Query: 340 MKLTT-TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+ L F P+ +P + V E S +L +L +P R +A ALQ+ + +
Sbjct: 239 VSLPRGAFPPRGPRP-VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 165/299 (55%), Gaps = 16/299 (5%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF---MAREIRILQ 164
+ Y+ +A++G G Y VYKARD +G VALK VR RE+ +L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 165 KLD---HPNVIKLEGL-ATSRM--QYSLYLVFDFMQSDLTKIICR-PGQKLTEPQVKCYM 217
+L+ HPNV++L + ATSR + + LVF+ + DL + + P L +K M
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 218 QQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLW 277
+Q L GL H I+HRD+K N+L+ G +K+ADFGL+ + + LT VVTLW
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTLW 184
Query: 278 YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW 337
YRAPE+LL ST Y +D+WS GC+ AEMF +PL G +E +QL +IF L G P ED W
Sbjct: 185 YRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 243
Query: 338 -KKMKLTT-TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+ + L F P+ +P + V E S +L +L +P R +A ALQ+ + +
Sbjct: 244 PRDVSLPRGAFPPRGPRP-VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 172/322 (53%), Gaps = 34/322 (10%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y+K+ K+G+G+Y V+K R+RDTG+IVA+KK +P K REIR+L++L HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
N++ L L R + L+LVF++ + + R + + E VK Q L + CH+
Sbjct: 63 NLVNL--LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGP---LTSRVVTLWYRAPELLLG 286
+HRD+K N+LI K ++K+ DFG + GP V T WYR+PELL+G
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLT----GPSDYYDDEVATRWYRSPELLVG 176
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGT---------PSEDYW 337
T YG +D+W+ GC+ AE+ G PL PG+++V+QL+ I K G + Y+
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236
Query: 338 KKMKLTTTFRPQHYKPSFREVFGEFPPSSY---GILTTLLALDPAYRGTAASALQNEFFN 394
+K+ P+ +P + +FP SY G+L L +DP R T L + +F
Sbjct: 237 SGVKIPD---PEDMEP----LELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
Query: 395 ASPLACDLSSLPVICREEDEPA 416
++ + + +E D+PA
Sbjct: 290 ------NIREIEDLAKEHDKPA 305
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 169/298 (56%), Gaps = 14/298 (4%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARD-RDTGKIVALKKVRFDTSEPESVKFMAREIRILQK 165
++ Y+ +A++G+G Y V+KARD ++ G+ VALK+VR T E RE+ +L+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 166 LD---HPNVIKLEGLAT---SRMQYSLYLVFDFMQSDLTKIICR-PGQKLTEPQVKCYMQ 218
L+ HPNV++L + T + + L LVF+ + DLT + + P + +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 219 QLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
QLL GL H ++HRD+K N+L+ SG +K+ADFGL+ + + LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 279 RAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW- 337
RAPE+LL S+ Y +DLWS GC+ AEMF +PL G ++V+QL +I + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 338 KKMKL-TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+ + L F + +P + + +L L +PA R +A SAL + +F
Sbjct: 245 RDVALPRQAFHSKSAQP-IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 169/298 (56%), Gaps = 14/298 (4%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARD-RDTGKIVALKKVRFDTSEPESVKFMAREIRILQK 165
++ Y+ +A++G+G Y V+KARD ++ G+ VALK+VR T E RE+ +L+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 166 LD---HPNVIKLEGLAT---SRMQYSLYLVFDFMQSDLTKIICR-PGQKLTEPQVKCYMQ 218
L+ HPNV++L + T + + L LVF+ + DLT + + P + +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 219 QLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
QLL GL H ++HRD+K N+L+ SG +K+ADFGL+ + + LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 279 RAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW- 337
RAPE+LL S+ Y +DLWS GC+ AEMF +PL G ++V+QL +I + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 338 KKMKL-TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+ + L F + +P + + +L L +PA R +A SAL + +F
Sbjct: 245 RDVALPRQAFHSKSAQP-IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 169/298 (56%), Gaps = 14/298 (4%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARD-RDTGKIVALKKVRFDTSEPESVKFMAREIRILQK 165
++ Y+ +A++G+G Y V+KARD ++ G+ VALK+VR T E RE+ +L+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 166 LD---HPNVIKLEGLAT---SRMQYSLYLVFDFMQSDLTKIICR-PGQKLTEPQVKCYMQ 218
L+ HPNV++L + T + + L LVF+ + DLT + + P + +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 219 QLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
QLL GL H ++HRD+K N+L+ SG +K+ADFGL+ + + LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 279 RAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW- 337
RAPE+LL S+ Y +DLWS GC+ AEMF +PL G ++V+QL +I + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 338 KKMKL-TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+ + L F + +P + + +L L +PA R +A SAL + +F
Sbjct: 245 RDVALPRQAFHSKSAQP-IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 226
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 226
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 204
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 264
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 265 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 319
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 110
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 228
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 288
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 289 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 343
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 93
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 211
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 271
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 272 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 326
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 204
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 264
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 265 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 319
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 82
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 200
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 260
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 261 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 315
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 102
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 220
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 280
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 281 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 335
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 112
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 230
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 290
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 291 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 345
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 79
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 197
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 257
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 258 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 312
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 87
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 205
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 265
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 266 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 320
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 192
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 75
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 193
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 253
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 254 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 308
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 192
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 78
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 196
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 256
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 257 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 311
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 153
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 271
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 331
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 332 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 386
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 158/292 (54%), Gaps = 16/292 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y VG G Y +V A D+ +G+ VA+KK+ K RE+ +L+ + H N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
VI L + T R Y YLV FMQ+DL KI+ G K +E +++ + Q+L GL++
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKY 141
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H G++HRD+K NL +++ LKI DFGL+ +T VVT WYRAPE++L
Sbjct: 142 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILS 197
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM-----K 341
Y +D+WS GC++AEM G+ L G+ ++QL +I K+ G P ++ +K+ K
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ + F ++F P + +L +L LD R TAA AL + FF
Sbjct: 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 192
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 158/292 (54%), Gaps = 16/292 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y VG G Y +V A D+ +G+ VA+KK+ K RE+ +L+ + H N
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
VI L + T R Y YLV FMQ+DL KI+ G + +E +++ + Q+L GL++
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKY 159
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H G++HRD+K NL +++ LKI DFGL+ +T VVT WYRAPE++L
Sbjct: 160 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILS 215
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM-----K 341
Y +D+WS GC++AEM G+ L G+ ++QL +I K+ G P ++ +K+ K
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ + F ++F P + +L +L LD R TAA AL + FF
Sbjct: 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 165/295 (55%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV D +F RE++I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 171 VIKLEGLATSRMQ----YSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + L LV D++ + ++ R Q L VK YM QL
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 192
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y LA VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 148
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 149 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 204
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 264
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 265 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 164/295 (55%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV + F RE++I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + + ++ R Q L VK YM QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRAPE 192
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM-- 340
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 341 KLTTTFRPQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 253 NYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 165/295 (55%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV + F RE++I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 192
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 343 T-TTFR-PQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T F+ PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 158/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L + Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 157
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 213
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 274 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 163/295 (55%), Gaps = 19/295 (6%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
SY +G G++ VY+A+ D+G++VA+KKV + F RE++I++KLDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSG 223
+++L S + + L LV D++ + ++ R Q L VK YM QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 224 LQHCHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D + +LK+ DFG + + + P S + + +YRAPE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAPE 192
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM-- 340
L+ G+TDY ID+WSAGC+LAE+ +G+P+ PG + V+QL I K+ GTP+ + ++M
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 341 KLTTTFRPQHYKPSFREVF-GEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
T PQ + +VF PP + + + LL P R T A + FF+
Sbjct: 253 NYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 158
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 214
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 144
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 200
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 261 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 144
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 200
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 134
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 190
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 155/293 (52%), Gaps = 15/293 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
NVI L + T S +++ +YLV M +DL I+ QKLT+ V+ + Q+L GL+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KSQKLTDDHVQFLIYQILRGLK 139
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+ H I+HRD+K SNL +++ LKI DFGL +T V T WYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGYVATRWYRAPEIML 195
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 346 FR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 140
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 196
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 160/295 (54%), Gaps = 17/295 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V + D +G +A+KK+ K RE+R+L+ + H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 170 NVIKLEGL---ATSRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + ATS +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 167
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 168 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 223
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM---- 340
L Y + +D+WS GC++AE+ GR L PG + QL +I +L GTP +M
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHE 283
Query: 341 -KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+ PQ K +F +VF P + +L +L LD R TA+ AL + +F+
Sbjct: 284 ARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFS 338
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 149
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 205
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 266 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 156/293 (53%), Gaps = 15/293 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
NVI L + T S +++ +YLV M +DL I+ QKLT+ V+ + Q+L GL+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDDHVQFLIYQILRGLK 139
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIML 195
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 346 FR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 143
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 199
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 145
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIM 201
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 158
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 214
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 275 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 145
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIM 201
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 158
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ + G + +R WYRAPE++
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR----WYRAPEIM 214
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 145
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIM 201
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 143
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 199
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 137
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 138 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 193
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 253
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 254 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 140
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 196
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 156/293 (53%), Gaps = 15/293 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
NVI L + T S +++ +YLV M +DL I+ QKLT+ V+ + Q+L GL+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDDHVQFLIYQILRGLK 139
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIML 195
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 346 FR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 144
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 200
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 144
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 200
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 145
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 201
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 157
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 213
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 274 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 150
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 206
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 150
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 206
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 149
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 205
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 266 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 143
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 199
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 140
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 196
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 136
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 137 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 192
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 252
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 253 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 161
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 217
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 140
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 196
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 162/306 (52%), Gaps = 17/306 (5%)
Query: 98 KEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA 157
++ LA + + + Y L+ VG G Y +V A D TG VA+KK+ K
Sbjct: 6 RQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 158 REIRILQKLDHPNVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQ 212
RE+R+L+ + H NVI L + T S +++ +YLV M +DL I+ C KLT+
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---AKLTDDH 122
Query: 213 VKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR 272
V+ + Q+L GL++ H I+HRD+K SNL +++ LKI DFGL+ +T
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 178
Query: 273 VVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTP 332
V T WYRAPE++L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 333 SEDYWKKMKLTTTFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASA 387
+ KK+ + Q K +F VF P + +L +L LD R TAA A
Sbjct: 239 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
Query: 388 LQNEFF 393
L + +F
Sbjct: 299 LAHAYF 304
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 134
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 190
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 251 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 135
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 191
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ +G G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 143
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 199
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 150
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 206
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 158/304 (51%), Gaps = 12/304 (3%)
Query: 103 GLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRI 162
L +S + Y+ L VG+G+Y V K R++DTG+IVA+KK + K REI++
Sbjct: 18 NLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKL 77
Query: 163 LQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLS 222
L++L H N++ L L + + YLVF+F+ + + L V+ Y+ Q+++
Sbjct: 78 LKQLRHENLVNL--LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN 135
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
G+ CH I+HRDIK N+L+ +SG++K+ DFG + + V T WYRAPE
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-VYDDEVATRWYRAPE 194
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGT---PSEDYWKK 339
LL+G YG +D+W+ GCL+ EMF+G PL PG ++++QL+ I G ++ + K
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK 254
Query: 340 MKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTL----LALDPAYRGTAASALQNEFFNA 395
+ R K RE P ++ L L +DP R A L ++FF
Sbjct: 255 NPVFAGVRLPEIKE--REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312
Query: 396 SPLA 399
A
Sbjct: 313 DGFA 316
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 135
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ +T V T WYRAPE++
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 191
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 158/296 (53%), Gaps = 13/296 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D Y+ + +G G Y V AR R TG+ VA+KK+ + K RE++IL+ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 170 NVIKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
N+I ++ + + Y S+Y+V D M+SDL +II Q LT V+ ++ QLL GL+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII-HSSQPLTLEHVRYFLYQLLRGLK 173
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFI---PKQKGPLTSRVVTLWYRAPE 282
+ H ++HRD+K SNLL++++ LKI DFG++ + + +T V T WYRAPE
Sbjct: 174 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWK---- 338
L+L +Y IDLWS GC+ EM R L PG+ V QL I + GTPS +
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 293
Query: 339 -KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+++ P + V+ + +L +L +P+ R +AA+AL++ F
Sbjct: 294 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ + G + +R WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR----WYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 158/296 (53%), Gaps = 13/296 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D Y+ + +G G Y V AR R TG+ VA+KK+ + K RE++IL+ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 170 NVIKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
N+I ++ + + Y S+Y+V D M+SDL +II Q LT V+ ++ QLL GL+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII-HSSQPLTLEHVRYFLYQLLRGLK 172
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFI---PKQKGPLTSRVVTLWYRAPE 282
+ H ++HRD+K SNLL++++ LKI DFG++ + + +T V T WYRAPE
Sbjct: 173 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWK---- 338
L+L +Y IDLWS GC+ EM R L PG+ V QL I + GTPS +
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 292
Query: 339 -KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+++ P + V+ + +L +L +P+ R +AA+AL++ F
Sbjct: 293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ + G + +R WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR----WYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 134
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ + G + +R WYRAPE++
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR----WYRAPEIM 190
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI D+GL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 161
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DFGL+ + G + +R WYRAPE++
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR----WYRAPEIM 217
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI DF L+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI FGL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI D GL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI D GL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 179/346 (51%), Gaps = 54/346 (15%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPES-VKFMAREIRILQKLD-HP 169
Y+ + K+G+G Y V+K+ DR TG++VA+KK+ FD + + + REI IL +L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCH 228
N++ L + + +YLVFD+M++DL +I + EP K Y+ QL+ +++ H
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVI---RANILEPVHKQYVVYQLIKVIKYLH 126
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGP-------------------- 268
G+LHRD+K SN+L++ +K+ADFGLS F+ ++
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 269 LTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
LT V T WYRAPE+LLGST Y GID+WS GC+L E+ G+P+ PG + + QL RI +
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246
Query: 329 CGTPSED--------YWKKMKLTTTFRPQHYKPSFREVFGEFP-------------PSSY 367
PS + + K M + + + + + R++F ++ +
Sbjct: 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEAL 306
Query: 368 GILTTLLALDPAYRGTAASALQNEFF------NASPLACDLSSLPV 407
+L LL +P R +A AL++ F N P + ++P+
Sbjct: 307 DLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPI 352
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 17/294 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ Y L+ VG G Y +V A D TG VA+KK+ K RE+R+L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 170 NVIKLEGLAT---SRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGL 224
NVI L + T S +++ +YLV M +DL I+ C QKLT+ V+ + Q+L GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGL 138
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
++ H I+HRD+K SNL +++ LKI D GL+ +T V T WYRAPE++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L Y +D+WS GC++AE+ GR L PG ++QL I +L GTP + KK+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 345 TFR-----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
Q K +F VF P + +L +L LD R TAA AL + +F
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 158/292 (54%), Gaps = 13/292 (4%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y +L +G+G Y V A D VA+KK+ + + + REI+IL + H NV
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL-REIQILLRFRHENV 103
Query: 172 IKLEGL---ATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
I + + +T +Y+V D M++DL K++ Q+L+ + ++ Q+L GL++ H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLL--KSQQLSNDHICYFLYQILRGLKYIH 161
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYRAPELLLG 286
+LHRD+K SNLLI+ + LKI DFGL+ P+ G LT V T WYRAPE++L
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWK---KMKLT 343
S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS++ MK
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKAR 281
Query: 344 TTFR--PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ P K ++ ++F + + +L +L +P R T AL + +
Sbjct: 282 NYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 162/298 (54%), Gaps = 26/298 (8%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y +G G++ V++A+ ++ + VA+KKV D +F RE++I++ + HPN
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK------RFKNRELQIMRIVKHPN 93
Query: 171 VIKLEGLATS----RMQYSLYLVFDFMQSDL---TKIICRPGQKLTEPQVKCYMQQLLSG 223
V+ L+ S + + L LV +++ + ++ + Q + +K YM QLL
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 224 LQHCHERGILHRDIKASNLLIDK-SGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L + H GI HRDIK NLL+D SG+LK+ DFG + I + P S + + +YRAPE
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRYYRAPE 211
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
L+ G+T+Y ID+WS GC++AE+ G+PL PG + ++QL I K+ GTPS + K M
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271
Query: 343 TTT------FRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
RP + FR PP + +++ LL P+ R TA AL + FF+
Sbjct: 272 NYMEHKFPQIRPHPFSKVFRP---RTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 150/293 (51%), Gaps = 15/293 (5%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L VG G Y V A D TG VA+KK+ K RE+R+L+ + H NV
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 172 IKLEGLATSRMQYS----LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T YLV FM +DL K++ +KL E +++ + Q+L GL++
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYI 144
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K NL +++ LKI DFGL+ + + VVT WYRAPE++L
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSEMXGXVVTRWYRAPEVILNW 200
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
Y +D+WS GC++AEM G+ L G ++QL I K+ GTP ++ ++++
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 348 -----PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
P+ K F + P + +L +L LD R TA AL + +F +
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 27/299 (9%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR-FDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G Y V A + TG+IVA+KK+ FD +P REI+IL+ H N+I +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFN 76
Query: 177 LA--TSRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ S ++ +Y++ + MQ+DL ++I Q L++ ++ ++ Q L ++ H ++
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPK---------QKGPLTSRVVTLWYRAPELL 284
HRD+K SNLLI+ + LK+ DFGL+ Q+ +T V T WYRAPE++
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L S Y +D+WS GC+LAE+F+ RP+ PGR QL IF + GTP D ++
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD--NDLRCIE 252
Query: 345 TFRPQHYKPS--------FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
+ R + Y S ++F P +L +L DPA R TA AL++ +
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 27/299 (9%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR-FDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G Y V A + TG+IVA+KK+ FD +P REI+IL+ H N+I +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFN 76
Query: 177 LA--TSRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ S ++ +Y++ + MQ+DL ++I Q L++ ++ ++ Q L ++ H ++
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPK---------QKGPLTSRVVTLWYRAPELL 284
HRD+K SNLLI+ + LK+ DFGL+ Q+ +T V T WYRAPE++
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L S Y +D+WS GC+LAE+F+ RP+ PGR QL IF + GTP D ++
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD--NDLRCIE 252
Query: 345 TFRPQHYKPS--------FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
+ R + Y S ++F P +L +L DPA R TA AL++ +
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 27/299 (9%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR-FDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G Y V A + TG+IVA+KK+ FD +P REI+IL+ H N+I +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFN 76
Query: 177 LA--TSRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ S ++ +Y++ + MQ+DL ++I Q L++ ++ ++ Q L ++ H ++
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPK---------QKGPLTSRVVTLWYRAPELL 284
HRD+K SNLLI+ + LK+ DFGL+ Q+ + V T WYRAPE++
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L S Y +D+WS GC+LAE+F+ RP+ PGR QL IF + GTP D ++
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD--NDLRCIE 252
Query: 345 TFRPQHYKPS--------FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
+ R + Y S ++F P +L +L DPA R TA AL++ +
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 130
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 389 QNEFF 393
+ +
Sbjct: 311 AHPYL 315
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 15/289 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
L VG G Y +V A D + VA+KK+ + RE+R+L+ L H NVI L
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 175 EGL---ATSRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
+ ATS +S +YLV M +DL I+ Q L++ V+ + QLL GL++ H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV--KSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
GI+HRD+K SN+ +++ L+I DFGL+ + +T V T WYRAPE++L Y
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHY 206
Query: 291 GVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM-----KLTTT 345
+D+WS GC++AE+ G+ L PG ++QL RI ++ GTPS + K+ +
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 346 FRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
P + +F P + +L +L LD R +AA AL + +F+
Sbjct: 267 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 315
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 128
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 389 QNEFF 393
+ +
Sbjct: 309 AHPYL 313
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 128
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 389 QNEFF 393
+ +
Sbjct: 309 AHPYL 313
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 20 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 78
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 136
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 257 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 316
Query: 389 QNEFF 393
+ +
Sbjct: 317 AHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 128
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 389 QNEFF 393
+ +
Sbjct: 309 AHPYL 313
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 148
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 389 QNEFF 393
+ +
Sbjct: 329 AHPYL 333
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 128
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 389 QNEFF 393
+ +
Sbjct: 309 AHPYL 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 132
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 389 QNEFF 393
+ +
Sbjct: 313 AHPYL 317
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 128
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 389 QNEFF 393
+ +
Sbjct: 309 AHPYL 313
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 130
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 251 QEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 389 QNEFF 393
+ +
Sbjct: 311 AHPYL 315
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 126
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 389 QNEFF 393
+ +
Sbjct: 307 AHPYL 311
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 133
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 389 QNEFF 393
+ +
Sbjct: 314 AHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 18 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 76
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 134
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 255 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 314
Query: 389 QNEFF 393
+ +
Sbjct: 315 AHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 9 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 67
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 125
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 246 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 305
Query: 389 QNEFF 393
+ +
Sbjct: 306 AHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 132
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 389 QNEFF 393
+ +
Sbjct: 313 AHPYL 317
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KCQHLSNDHICY 132
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 389 QNEFF 393
+ +
Sbjct: 313 AHPYL 317
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL-R 74
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 132
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 389 QNEFF 393
+ +
Sbjct: 313 AHPYL 317
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 154/290 (53%), Gaps = 17/290 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
L VG G Y +V A D + VA+KK+ + RE+R+L+ L H NVI L
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 175 EGL---ATSRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+ ATS +S +YLV M +DL I+ C Q L++ V+ + QLL GL++ H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGLKYIHS 149
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
GI+HRD+K SN+ +++ L+I DFGL+ + +T V T WYRAPE++L
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM-----KLTT 344
Y +D+WS GC++AE+ G+ L PG ++QL RI ++ GTPS + K+ +
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 345 TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
P + +F P + +L +L LD R +AA AL + +F+
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 315
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 130
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 389 QNEFF 393
+ +
Sbjct: 311 AHPYL 315
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA++K+ + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL-R 74
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 132
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 389 QNEFF 393
+ +
Sbjct: 313 AHPYL 317
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 154/290 (53%), Gaps = 17/290 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
L VG G Y +V A D + VA+KK+ + RE+R+L+ L H NVI L
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 175 EGL---ATSRMQYS-LYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+ ATS +S +YLV M +DL I+ C Q L++ V+ + QLL GL++ H
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGLKYIHS 141
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
GI+HRD+K SN+ +++ L+I DFGL+ + +T V T WYRAPE++L
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMH 197
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM-----KLTT 344
Y +D+WS GC++AE+ G+ L PG ++QL RI ++ GTPS + K+ +
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 257
Query: 345 TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
P + +F P + +L +L LD R +AA AL + +F+
Sbjct: 258 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 307
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 154/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 126
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+P
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 389 QNEFF 393
+ +
Sbjct: 307 AHPYL 311
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 154/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 132
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G L V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 389 QNEFF 393
+ +
Sbjct: 313 AHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 154/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +Y+V D M++DL K++ Q L+ +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY 133
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G L V
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 389 QNEFF 393
+ +
Sbjct: 314 AHPYL 318
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 153/305 (50%), Gaps = 13/305 (4%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E++ G V Y L+ +G+G Y V A D VA+KK+ + + + R
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 159 EIRILQKLDHPNVIKLEGLA---TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
EI+IL + H N+I + + T +YLV M +DL K++ Q L+ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL--KTQHLSNDHICY 148
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRV 273
++ Q+L GL++ H +LHRD+K SNLL++ + LKI DFGL+ P G LT V
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T WYRAPE++L S Y ID+WS GC+LAEM RP+ PG+ ++QL+ I + G+PS
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 334 EDYWK-----KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASAL 388
++ K + P K + +F + +L +L +P R AL
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 389 QNEFF 393
+ +
Sbjct: 329 AHPYL 333
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 161/310 (51%), Gaps = 25/310 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V+ A D D K VA+KK+ ++P+SVK REI+I+++LDH N+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL--TDPQSVKHALREIKIIRRLDHDNI 70
Query: 172 IKL-EGLATSRMQY-----------SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQ 219
+K+ E L S Q S+Y+V ++M++DL ++ + L E + +M Q
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQ 128
Query: 220 LLSGLQHCHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIP--KQKGPLTSRVVTL 276
LL GL++ H +LHRD+K +NL I+ + LKI DFGL+ P KG L+ +VT
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 277 WYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK-LCGTPSED 335
WYR+P LLL +Y ID+W+AGC+ AEM G+ L G E+EQ+ I + + ED
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 336 YWKKMKLTTTF----RPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNE 391
+ + + + + +KP ++ + L +L P R TA AL +
Sbjct: 249 RQELLSVIPVYIRNDMTEPHKP-LTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP 307
Query: 392 FFNASPLACD 401
+ + D
Sbjct: 308 YMSIYSFPMD 317
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 163/322 (50%), Gaps = 45/322 (13%)
Query: 116 AKVGQGTYSNVYKARDRDTGKI--VALKKVRFDTSEPESVKFMA-REIRILQKLDHPNVI 172
KVG+GTY +VYKA+ +D ALK++ E + A REI +L++L HPNVI
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQI-----EGTGISMSACREIALLRELKHPNVI 81
Query: 173 KLEGLATSRMQYSLYLVFDFMQSDLTKIIC---------RPGQKLTEPQVKCYMQQLLSG 223
L+ + S ++L+FD+ + DL II +P Q L VK + Q+L G
Sbjct: 82 SLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQ-LPRGMVKSLLYQILDG 140
Query: 224 LQHCHERGILHRDIKASNLLI----DKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLW 277
+ + H +LHRD+K +N+L+ + G +KIAD G + F K L VVT W
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 200
Query: 278 YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTE---------VEQLHRIFKL 328
YRAPELLLG+ Y ID+W+ GC+ AE+ P+ R E +QL RIF +
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 260
Query: 329 CGTPSEDYWKKMK-------LTTTFRPQHYKP----SFREVFGEFPPS-SYGILTTLLAL 376
G P++ W+ +K L FR Y + E P S ++ +L LL +
Sbjct: 261 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTM 320
Query: 377 DPAYRGTAASALQNEFFNASPL 398
DP R T+ A+Q+ +F PL
Sbjct: 321 DPIKRITSEQAMQDPYFLEDPL 342
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 180
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 237
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357
Query: 392 FFNA 395
+ N
Sbjct: 358 YINV 361
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 180
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 237
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357
Query: 392 FFNA 395
+ N
Sbjct: 358 YINV 361
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 141
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 142 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 198
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 258
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 259 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 318
Query: 392 FFNA 395
+ N
Sbjct: 319 YINV 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 136
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 193
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 254 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 392 FFNA 395
+ N
Sbjct: 314 YINV 317
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 159/304 (52%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L+++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTPS ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 143
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 200
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 261 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 320
Query: 392 FFNA 395
+ N
Sbjct: 321 YINV 324
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 136
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 193
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 254 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 392 FFNA 395
+ N
Sbjct: 314 YINV 317
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 143
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 200
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 261 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 320
Query: 392 FFNA 395
+ N
Sbjct: 321 YINV 324
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHL 135
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 192
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312
Query: 392 FFNA 395
+ N
Sbjct: 313 YINV 316
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 135
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 192
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ +F ++F + FP S +L+ +L +DPA R + ALQ+
Sbjct: 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312
Query: 392 FFNA 395
+ N
Sbjct: 313 YINV 316
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 159/304 (52%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L+++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTPS ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 159/304 (52%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L+++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTPS ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 159/304 (52%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L+++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTPS ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 147
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 204
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +DLWS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T T+
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 264
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 265 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 324
Query: 392 FFNA 395
+ N
Sbjct: 325 YINV 328
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 136
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 193
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +DLWS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T T+
Sbjct: 194 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 253
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 254 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 313
Query: 392 FFNA 395
+ N
Sbjct: 314 YINV 317
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTPS ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 158/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L+++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS G ++ EM G L PG ++Q +++ + GTPS ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ + VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +DLWS GC++ EM + L PGR ++Q +++ + GTP ++ KK++ T T+
Sbjct: 200 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTP ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTP ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 143
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 200
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTP ++ KK++ T T+
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 260
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320
Query: 392 FFNA 395
+ N
Sbjct: 321 YINV 324
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 158/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L+++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ +T VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS G ++ EM G L PG ++Q +++ + GTPS ++ KK++ T T+
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 160/341 (46%), Gaps = 58/341 (17%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D+Y +G+G+Y VY A D++T K VA+KKV + K + REI IL +L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 170 NVIKLEGLAT--SRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+I+L L +++ LY+V + SDL K+ P LTE +K + LL G
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF-LTEEHIKTILYNLLLGENF 144
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK-------------GP----- 268
HE GI+HRD+K +N L+++ +K+ DFGL+ ++ GP
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 269 ---LTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF----------IGR-PLMP 314
LTS VVT WYRAPEL+L +Y ID+WS GC+ AE+ R PL P
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264
Query: 315 G-----------------RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRP----QHYKP 353
G ++ +QL+ IF + GTP+ED K + + H KP
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKP 324
Query: 354 -SFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ ++ + +L ++L +P R T AL + +
Sbjct: 325 INLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 53/331 (16%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S+ Y +G G++ V + D ++GK ALKKV D ++ RE+ I++ LD
Sbjct: 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLD 58
Query: 168 HPNVIKL----------------------------EGLAT---------SRMQYSLYLVF 190
H N+IKL G+ S+ +Y L ++
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKY-LNVIM 117
Query: 191 DFMQSDLTKII---CRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLID-K 246
+++ L K++ R G+ + + Y+ QL + H GI HRDIK NLL++ K
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSK 177
Query: 247 SGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
LK+ DFG + IP + P + + + +YRAPEL+LG+T+Y IDLWS GC+ E+
Sbjct: 178 DNTLKLCDFGSAKKLIPSE--PSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235
Query: 307 FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK--LTTTFRPQHYKPSFREVFGEFPP 364
+G+PL G T ++QL RI ++ GTP+++ +M T P +R++ E P
Sbjct: 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTP 295
Query: 365 S-SYGILTTLLALDPAYRGTAASALQNEFFN 394
S + +L +L +P R A+ + FF+
Sbjct: 296 SLAIDLLEQILRYEPDLRINPYEAMAHPFFD 326
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 156/304 (51%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 144
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ + VVT +YRAPE++LG
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILG- 201
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT-TF 346
Y +D+WS GC++ EM G L PG ++Q +++ + GTP ++ KK++ T T+
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 261
Query: 347 ---RPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 262 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 321
Query: 392 FFNA 395
+ N
Sbjct: 322 YINV 325
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 154/304 (50%), Gaps = 26/304 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y L +G G V A D + VA+KK+ K RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +Y+V + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI+HRD+K SN+++ LKI DFGL+ + VVT +YRAPE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILG- 199
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT---- 343
Y +D+WS GC++ EM + L PGR ++Q +++ + GTP + KK++ T
Sbjct: 200 MGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNY 259
Query: 344 TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAASALQNE 391
RP++ SF ++F + FP S +L+ +L +D + R + ALQ+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 392 FFNA 395
+ N
Sbjct: 320 YINV 323
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 36/309 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y +L +G G V A D G VA+KK+ K RE+ +L+ ++H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGL-----SNFFIPKQKGPLTSRVVTLWYRAPE 282
H GI+HRD+K SN+++ LKI DFGL +NF +T VVT +YRAPE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM-------MTPYVVTRYYRAPE 195
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
++LG Y +D+WS GC++ E+ G + G ++Q +++ + GTPS ++ ++
Sbjct: 196 VILG-MGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 254
Query: 343 T----TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAAS 386
T RP++ F E+F + FP S +L+ +L +DP R +
Sbjct: 255 TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 314
Query: 387 ALQNEFFNA 395
AL++ +
Sbjct: 315 ALRHPYITV 323
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 36/309 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y +L +G G V A D G VA+KK+ K RE+ +L+ ++H N+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 172 IKLEGLATSRMQY----SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I L + T + +YLV + M ++L ++I +L ++ + Q+L G++H
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHL 140
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGL-----SNFFIPKQKGPLTSRVVTLWYRAPE 282
H GI+HRD+K SN+++ LKI DFGL +NF +T VVT +YRAPE
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM-------MTPYVVTRYYRAPE 193
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
++LG Y +D+WS GC++ E+ G + G ++Q +++ + GTPS ++ ++
Sbjct: 194 VILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 252
Query: 343 T----TTFRPQHYKPSFREVFGE--FPPSS----------YGILTTLLALDPAYRGTAAS 386
T RP + +F E+F + FP S +L+ +L +DP R +
Sbjct: 253 TVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 312
Query: 387 ALQNEFFNA 395
AL++ +
Sbjct: 313 ALRHPYITV 321
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 159/355 (44%), Gaps = 66/355 (18%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D Y+ +G G+Y +V +A D+ ++VA+KK+ + K + REI IL +L+H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 170 NVIKLEGLATSRMQY---SLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+V+K+ + + LY+V + SD K+ P LTE +K + LL G+++
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY-LTELHIKTLLYNLLVGVKY 171
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLS---------NFFIP-------------- 263
H GILHRD+K +N L+++ +K+ DFGL+ N +P
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 264 ---KQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF----------IGR 310
K LT VVT WYRAPEL+L +Y ID+WS GC+ AE+ R
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
Query: 311 -PLMPG--------------------RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR-- 347
PL PG R +QL+ IF + GTPSE+ + ++ R
Sbjct: 292 GPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYI 351
Query: 348 ---PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLA 399
P+ E F + +L +L +P R T L + FF +A
Sbjct: 352 RIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 137/287 (47%), Gaps = 56/287 (19%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
K D+Y+ +G+G+Y VY A D++ K VA+KKV + K + REI IL +L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 167 DHPNVIKLEGLATSR--MQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
+I+L L +++ LY+V + SDL K+ P LTE VK + LL G
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF-LTEQHVKTILYNLLLG 143
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQ------------------ 265
+ HE GI+HRD+K +N L+++ +KI DFGL+ +
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 266 ------KGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF----------IG 309
K LTS VVT WYRAPEL+L +Y ID+WS GC+ AE+
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTN 263
Query: 310 R-PLMPG-----------------RTEVEQLHRIFKLCGTPSEDYWK 338
R PL PG ++ +QL+ IF + GTP E+ K
Sbjct: 264 RFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLK 310
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + + V +K ++ P + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK-----PVKKNKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 LD-------PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 150/308 (48%), Gaps = 28/308 (9%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
K D + GQGT+ V +++ TG VA+KKV D +F RE++I+Q L
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP------RFRNRELQIMQDL 73
Query: 167 ---DHPNVIKLEGLATS-----RMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQ---VKC 215
HPN+++L+ + R L +V +++ L + ++ P +K
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV 133
Query: 216 YMQQLLS--GLQHCHERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSR 272
++ QL+ G H + HRDIK N+L++++ G LK+ DFG + P + P +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAY 191
Query: 273 VVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTP 332
+ + +YRAPEL+ G+ Y +D+WS GC+ AEM +G P+ G QLH I ++ G P
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP 251
Query: 333 SEDYWKKMKLTTTFRPQHYKPS--FREVFGEF----PPSSYGILTTLLALDPAYRGTAAS 386
S + +K+ + T + + VF + +Y +L+ LL P R
Sbjct: 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYE 311
Query: 387 ALQNEFFN 394
AL + +F+
Sbjct: 312 ALCHPYFD 319
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 33/310 (10%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA---------REIRILQKLDH 168
+ G+Y V D + G VA+K+V S+ +V ++ REIR+L H
Sbjct: 30 ISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 169 PNVIKLEGLATSRMQ---YSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
PN++ L + + + LYLV + M++DL ++I ++ ++ +M +L GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
HE G++HRD+ N+L+ + + I DF L+ T V WYRAPEL++
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPELVM 206
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
+ +D+WSAGC++AEMF + L G T QL++I ++ GTP K++
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP------KIEDVVM 260
Query: 346 FRPQHYKPSFREVFGEFP------------PSSYGILTTLLALDPAYRGTAASALQNEFF 393
F + R P P + ++ +L +P R + AL++ +F
Sbjct: 261 FSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
Query: 394 NASPLACDLS 403
+ DL+
Sbjct: 321 ESLFDPLDLT 330
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 33/310 (10%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA---------REIRILQKLDH 168
+ G+Y V D + G VA+K+V S+ +V ++ REIR+L H
Sbjct: 30 ISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 169 PNVIKLEGLATSRMQ---YSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
PN++ L + + + LYLV + M++DL ++I ++ ++ +M +L GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
HE G++HRD+ N+L+ + + I DF L+ T V WYRAPEL++
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPELVM 206
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
+ +D+WSAGC++AEMF + L G T QL++I ++ GTP K++
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP------KIEDVVM 260
Query: 346 FRPQHYKPSFREVFGEFP------------PSSYGILTTLLALDPAYRGTAASALQNEFF 393
F + R P P + ++ +L +P R + AL++ +F
Sbjct: 261 FSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
Query: 394 NASPLACDLS 403
+ DL+
Sbjct: 321 ESLFDPLDLT 330
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TG+ VA+K + P S++ + RE+RI++ L+HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 171 VIKL-EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++KL E + T + +LYL+ ++ ++ E + + +Q++S +Q+CH+
Sbjct: 73 IVKLFEVIETEK---TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+ I+HRD+KA NLL+D +KIADFG SN F G L + + Y APEL G
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV--GGKLDTFCGSPPYAAPELFQGKKY 187
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L + G G+ E R+ L +R
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------LRGKYRIP 231
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
Y + E +L L L+P RGT +++ + NA
Sbjct: 232 FYMSTDCE----------NLLKRFLVLNPIKRGTLEQIMKDRWINA 267
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TG+ VA+K + P S++ + RE+RI++ L+HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 171 VIKL-EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++KL E + T + +LYL+ ++ ++ E + + +Q++S +Q+CH+
Sbjct: 76 IVKLFEVIETEK---TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+ I+HRD+KA NLL+D +KIADFG SN F G L + Y APEL G
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV--GGKLDAFCGAPPYAAPELFQGKKY 190
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L + G G+ E R+ L +R
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------LRGKYRIP 234
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
Y + E +L L L+P RGT +++ + NA
Sbjct: 235 FYMSTDCE----------NLLKRFLVLNPIKRGTLEQIMKDRWINA 270
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVAVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N+LID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 153/307 (49%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL- 166
+ D Y + K+G+G YS V++A + I ++V +P K + RE++IL+ L
Sbjct: 36 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNERVVVKILKPVKKKKIKREVKILENLR 90
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
N+IKL + + LVF+++ + K + Q LT+ ++ YM +LL L +
Sbjct: 91 GGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDY 147
Query: 227 CHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH +GI+HRD+K N++ID + L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 148 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE--YNVRVASRYFKGPELLV 205
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M R P G+ +QL RI K+ GT Y KK +
Sbjct: 206 DYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHID 265
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G+ P + +L LL D R TA
Sbjct: 266 LD-------PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 318
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 319 AMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 153/307 (49%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL- 166
+ D Y + K+G+G YS V++A + I ++V +P K + RE++IL+ L
Sbjct: 41 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNERVVVKILKPVKKKKIKREVKILENLR 95
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
N+IKL + + LVF+++ + K + Q LT+ ++ YM +LL L +
Sbjct: 96 GGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDY 152
Query: 227 CHERGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH +GI+HRD+K N++ID + L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 153 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE--YNVRVASRYFKGPELLV 210
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M R P G+ +QL RI K+ GT Y KK +
Sbjct: 211 DYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHID 270
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G+ P + +L LL D R TA
Sbjct: 271 LD-------PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 323
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 324 AMEHPYF 330
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TGK VA+K + S++ + RE+RI++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 171 VIKL-EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++KL E + T + +LYLV ++ ++ E + + +Q++S +Q+CH+
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+ I+HRD+KA NLL+D +KIADFG SN F K L + + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKY 189
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L + G G+ E R+ L +R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------LRGKYRIP 233
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
Y + E +L L L+P+ RGT +++ + N
Sbjct: 234 FYMSTDCE----------NLLKKFLILNPSKRGTLEQIMKDRWMNV 269
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TGK VA+K + S++ + RE+RI++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 171 VIKL-EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++KL E + T + +LYLV ++ ++ E + + +Q++S +Q+CH+
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+ I+HRD+KA NLL+D +KIADFG SN F K L + + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKY 189
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L + G G+ E R+ L +R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------LRGKYRIP 233
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
Y + E +L L L+P+ RGT +++ + N
Sbjct: 234 FYMSTDCE----------NLLKKFLILNPSKRGTLEQIMKDRWMNV 269
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 129/245 (52%), Gaps = 15/245 (6%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-- 166
A Y+ L +G+G++ V KA D + VALK VR +E + A EIRIL+ L
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRK 152
Query: 167 -DHPNVIK-LEGLATSRMQYSLYLVFDFMQSDLTKIICRPG-QKLTEPQVKCYMQQLLSG 223
D N + + L + + + F+ + +L ++I + Q + P V+ + +L
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 224 LQHCHERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
L H+ I+H D+K N+L+ + G +K+ DFG S + + + SR +YRAP
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSR----FYRAP 268
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E++LG+ YG+ ID+WS GC+LAE+ G PL+PG E +QL + +L G PS+ K
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327
Query: 342 LTTTF 346
F
Sbjct: 328 RAKNF 332
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 129/245 (52%), Gaps = 15/245 (6%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-- 166
A Y+ L +G+G++ V KA D + VALK VR +E + A EIRIL+ L
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRK 152
Query: 167 -DHPNVIK-LEGLATSRMQYSLYLVFDFMQSDLTKIICRPG-QKLTEPQVKCYMQQLLSG 223
D N + + L + + + F+ + +L ++I + Q + P V+ + +L
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 224 LQHCHERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
L H+ I+H D+K N+L+ + G +K+ DFG S + + + SR +YRAP
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSR----FYRAP 268
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E++LG+ YG+ ID+WS GC+LAE+ G PL+PG E +QL + +L G PS+ K
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327
Query: 342 LTTTF 346
F
Sbjct: 328 RAKNF 332
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 137/286 (47%), Gaps = 32/286 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TGK VA+K + S++ + RE+RI++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 171 VIKL-EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++KL E + T + +LYLV ++ ++ E + + +Q++S +Q+CH+
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+ I+HRD+KA NLL+D +KIADFG SN F K L + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKY 189
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L + G G+ E R+ L +R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------LRGKYRIP 233
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
Y + E +L L L+P+ RGT +++ + N
Sbjct: 234 FYMSTDCE----------NLLKKFLILNPSKRGTLEQIMKDRWMNV 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL-EG 176
+G+G ++ V AR TG+ VA+K + P S++ + RE+RI++ L+HPN++KL E
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ T + +LYLV ++ ++ E + + +Q++S +Q+CH++ I+HRD
Sbjct: 83 IETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRD 139
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
+KA NLL+D +KIADFG SN F K L + + Y APEL G G +D+
Sbjct: 140 LKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDV 197
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
WS G +L + G G+ E R+ +
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TGK VA++ + S++ + RE+RI++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 171 VIKL-EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++KL E + T + +LYLV ++ ++ E + + +Q++S +Q+CH+
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+ I+HRD+KA NLL+D +KIADFG SN F K L + + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKY 189
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L + G G+ E R+ L +R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------LRGKYRIP 233
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
Y + E +L L L+P+ RGT +++ + N
Sbjct: 234 FYMSTDCE----------NLLKKFLILNPSKRGTLEQIMKDRWMNV 269
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 137/286 (47%), Gaps = 32/286 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TGK VA++ + S++ + RE+RI++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 171 VIKL-EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++KL E + T + +LYLV ++ ++ E + + +Q++S +Q+CH+
Sbjct: 75 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+ I+HRD+KA NLL+D +KIADFG SN F K L + Y APEL G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGKKY 189
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L + G G+ E R+ L +R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------LRGKYRIP 233
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
Y + E +L L L+P+ RGT +++ + N
Sbjct: 234 FYMSTDCE----------NLLKKFLILNPSKRGTLEQIMKDRWMNV 269
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 117/222 (52%), Gaps = 13/222 (5%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKL 166
+ D +D + +G+G + NVY AR++ I+ALK + E E V+ + REI I L
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++++ R + +YL+ +F + +L K + + G + E + +M++L L
Sbjct: 72 RHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALH 128
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPEL 283
+CHER ++HRDIK NLL+ G LKIADFG S L R + TL Y PE+
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDYLPPEM 183
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
+ G T + +DLW AG L E +G P + E RI
Sbjct: 184 IEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 34 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 88
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 89 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 145
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 203
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 204 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 264 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 317 AMEHPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 34 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 88
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 89 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 145
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 203
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 204 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 264 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 317 AMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGEF-----------------PPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 14/225 (6%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLD 167
+D Y ++ K+G G Y V +D+ TG A+K ++ + + + + E+ +L++LD
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++KL + Y YLV + + +II R QK +E M+Q+LSG
Sbjct: 80 HPNIMKLYEFFEDKRNY--YLVMEVYRGGELFDEIILR--QKFSEVDAAVIMKQVLSGTT 135
Query: 226 HCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K NLL++ + ++KI DFGLS F + G + R+ T +Y APE
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPE 193
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
+L Y D+WS G +L + G P G+T+ E L R+ K
Sbjct: 194 VL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 236
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 33 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 87
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 88 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 144
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 202
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 203 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262
Query: 344 TTFRPQHYKPSFREVFGEF-----------------PPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 263 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 315
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 316 AMEHPYF 322
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 137/286 (47%), Gaps = 32/286 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TGK VA+K + S++ + RE+RI++ L+HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 171 VIKL-EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++KL E + T + +LYLV ++ + E + + +Q++S +Q+CH+
Sbjct: 68 IVKLFEVIETEK---TLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+ I+HRD+KA NLL+D +KIADFG SN F K L + + Y APEL G
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKY 182
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L + G G+ E R+ L +R
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------LRGKYRIP 226
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
Y + E +L L L+P+ RGT +++ + N
Sbjct: 227 FYMSTDCE----------NLLKKFLILNPSKRGTLEQIMKDRWMNV 262
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL- 166
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 40 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 94
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 95 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 151
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 152 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 209
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 210 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 269
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 270 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 322
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 323 AMEHPYF 329
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ D Y + K+G+G YS V++A + I +KV +P K + REI+IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 168 H-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN+I L + + + LVF+ + + K + Q LT+ ++ YM ++L L +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDY 146
Query: 227 CHERGILHRDIKASNLLIDKSGM-LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
CH GI+HRD+K N++ID L++ D+GL+ F+ P Q+ RV + +++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLV 204
Query: 286 GSTDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPS-EDYWKKMKLT 343
Y +D+WS GC+LA M F P G +QL RI K+ GT DY K +
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 344 TTFRPQHYKPSFREVFGE-----------------FPPSSYGILTTLLALDPAYRGTAAS 386
P F ++ G P + L LL D R TA
Sbjct: 265 L-------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 387 ALQNEFF 393
A+++ +F
Sbjct: 318 AMEHPYF 324
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 127/245 (51%), Gaps = 15/245 (6%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-- 166
A Y+ L +G+G + V KA D + VALK VR +E + A EIRIL+ L
Sbjct: 96 AYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRK 152
Query: 167 -DHPNVIK-LEGLATSRMQYSLYLVFDFMQSDLTKIICRPG-QKLTEPQVKCYMQQLLSG 223
D N + + L + + + F+ + +L ++I + Q + P V+ + +L
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 224 LQHCHERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
L H+ I+H D+K N+L+ + G +K+ DFG S + + + SR +YRAP
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSR----FYRAP 268
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E++LG+ YG+ ID+WS GC+LAE+ G PL+PG E +QL + +L G P + K
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASK 327
Query: 342 LTTTF 346
F
Sbjct: 328 RAKNF 332
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 14/225 (6%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLD 167
+D Y ++ K+G G Y V +D+ TG A+K ++ + + + + E+ +L++LD
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++KL + Y YLV + + +II R QK +E M+Q+LSG
Sbjct: 63 HPNIMKLYEFFEDKRNY--YLVMEVYRGGELFDEIILR--QKFSEVDAAVIMKQVLSGTT 118
Query: 226 HCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K NLL++ + ++KI DFGLS F + G + R+ T +Y APE
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPE 176
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
+L Y D+WS G +L + G P G+T+ E L R+ K
Sbjct: 177 VL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 219
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 41/307 (13%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
A+ Y+ + +G+G++ V K +DR T + A+K + +++ + + RE+ +L+KLDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 169 PNVIKL-EGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
PN++KL E L S S Y+V + +II R ++ +E ++Q+ SG+
Sbjct: 81 PNIMKLFEILEDSS---SFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGIT 135
Query: 226 HCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K N+L+ +K +KI DFGLS F +Q + R+ T +Y APE
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPE 193
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+L G+ Y D+WSAG +L + G P G+ E + L R+
Sbjct: 194 VLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV----------------- 234
Query: 343 TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN----EFFNASPL 398
T + P +R + + ++ +L P+ R TA L++ ++ + +P
Sbjct: 235 -ETGKYAFDLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPT 289
Query: 399 ACDLSSL 405
DL SL
Sbjct: 290 ISDLPSL 296
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 15/223 (6%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
A+ Y+ + +G+G++ V K +DR T + A+K + +++ + + RE+ +L+KLDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 169 PNVIKL-EGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
PN++KL E L S S Y+V + +II R ++ +E ++Q+ SG+
Sbjct: 81 PNIMKLFEILEDSS---SFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGIT 135
Query: 226 HCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K N+L+ +K +KI DFGLS F +Q + R+ T +Y APE
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPE 193
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
+L G+ Y D+WSAG +L + G P G+ E + L R+
Sbjct: 194 VLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 15/223 (6%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
A+ Y+ + +G+G++ V K +DR T + A+K + +++ + + RE+ +L+KLDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 169 PNVIKL-EGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
PN++KL E L S S Y+V + +II R ++ +E ++Q+ SG+
Sbjct: 81 PNIMKLFEILEDSS---SFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGIT 135
Query: 226 HCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K N+L+ +K +KI DFGLS F +Q + R+ T +Y APE
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPE 193
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
+L G+ Y D+WSAG +L + G P G+ E + L R+
Sbjct: 194 VLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 116/220 (52%), Gaps = 9/220 (4%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKL 166
+ D +D +G+G + NVY AR++ I+ALK + E E V+ + REI I L
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++++ R + +YL+ +F + +L K + + G + E + +M++L L
Sbjct: 73 RHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALH 129
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+CHER ++HRDIK NLL+ G LKIADFG S ++ + TL Y PE++
Sbjct: 130 YCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPEMIE 186
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
G T + +DLW AG L E +G P + E RI
Sbjct: 187 GKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 116/220 (52%), Gaps = 9/220 (4%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKL 166
+ D +D +G+G + NVY AR++ I+ALK + E E V+ + REI I L
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++++ R + +YL+ +F + +L K + + G + E + +M++L L
Sbjct: 72 RHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALH 128
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+CHER ++HRDIK NLL+ G LKIADFG S ++ + TL Y PE++
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPEMIE 185
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
G T + +DLW AG L E +G P + E RI
Sbjct: 186 GKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
+Y L +G+G ++ V AR TGK VA+K + S++ + RE+RI + L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
++KL + +LYLV ++ + E + + +Q++S +Q+CH++
Sbjct: 75 IVKL--FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
I+HRD+KA NLL+D +KIADFG SN F K L + Y APEL G
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKYD 190
Query: 291 GVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
G +D+WS G +L + G G+ E R+ +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 122/237 (51%), Gaps = 13/237 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
++ Y ++ K+G G Y V RD+ T A+K +R + S + E+ +L+ LDH
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
PN++KL + Y YLV + + +II R K E ++Q+LSG+ +
Sbjct: 96 PNIMKLYDFFEDKRNY--YLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTY 151
Query: 227 CHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
H+ I+HRD+K NLL+ +K ++KI DFGLS F ++K + R+ T +Y APE+
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--MKERLGTAYYIAPEV 209
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
L Y D+WS G +L + G P G+T+ E L ++ K T WK +
Sbjct: 210 L--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 146/302 (48%), Gaps = 48/302 (15%)
Query: 104 LVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRIL 163
L + + +D L K+G+G+Y +VYKA ++TG+IVA+K+V ++ E +K EI I+
Sbjct: 23 LTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK----EISIM 78
Query: 164 QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLS 222
Q+ D P+V+K G + L++V ++ + ++ II + LTE ++ +Q L
Sbjct: 79 QQCDSPHVVKYYG--SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK 136
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-------T 275
GL++ H +HRDIKA N+L++ G K+ADFG++ G LT + T
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA--------GQLTDXMAKRNXVIGT 188
Query: 276 LWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSED 335
++ APE ++ Y D+WS G EM G+ P ++ + IF + P
Sbjct: 189 PFWMAPE-VIQEIGYNCVADIWSLGITAIEMAEGK---PPYADIHPMRAIFMIPTNPP-- 242
Query: 336 YWKKMKLTTTFR-PQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
TFR P+ + +F + + L P R TA LQ+ F
Sbjct: 243 --------PTFRKPELWSDNFTD-----------FVKQCLVKSPEQRATATQLLQHPFVR 283
Query: 395 AS 396
++
Sbjct: 284 SA 285
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH- 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 142
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 200
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 259
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH- 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 142
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 200
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 259
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH- 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 142
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 200
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 259
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 149/298 (50%), Gaps = 24/298 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH- 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 163
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 221
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSED-YWKKMK---- 341
DY +D+WS GC+ A M F P G +QL +I K+ GT + Y K +
Sbjct: 222 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELD 281
Query: 342 --LTTTFRPQHYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
L KP + + + P + L LL D R TA A+ + +F
Sbjct: 282 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 339
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-DH 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 142
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 200
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 259
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-DH 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 144
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 202
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 203 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 261
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 262 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH- 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 143
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 201
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 202 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 260
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 261 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-DH 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 143
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 201
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 202 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 260
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 261 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-DH 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLMGG 85
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 142
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 200
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 259
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 26/299 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-DH 168
D Y+ + KVG+G YS V++ + + + K +P K + REI+ILQ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
PN++KL + + + L+F+++ + K++ LT+ ++ Y+ +LL L +CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCH 142
Query: 229 ERGILHRDIKASNLLIDKS-GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+GI+HRD+K N++ID L++ D+GL+ F+ P ++ RV + +++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDL 200
Query: 288 TDYGVGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
DY +D+WS GC+ A M F P G +QL +I K+ GT + + K
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN-KYRIEL 259
Query: 347 RPQ--------HYKPSFREVFGE----FPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
PQ KP + + + P + L LL D R TA A+ + +F
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 125/234 (53%), Gaps = 13/234 (5%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVR-FDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+G+G +S VY+A G VALKKV+ FD + ++ +EI +L++L+HPNVIK
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY- 97
Query: 176 GLATSRMQYSLYLVFDFMQS-DLTKIIC---RPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
A+ L +V + + DL+++I + + + E V Y QL S L+H H R
Sbjct: 98 -YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
++HRDIK +N+ I +G++K+ D GL FF K S V T +Y +PE + Y
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA-HSLVGTPYYMSPE-RIHENGYN 214
Query: 292 VGIDLWSAGCLLAEM-FIGRPLMPGRTEVEQLHRIFKLCG---TPSEDYWKKMK 341
D+WS GCLL EM + P + + L + + C PS+ Y ++++
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 105 VPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
+P A+ Y+ L +G G+Y K R + GKI+ K++ + + + + E+ +L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKII---CRPGQKLTEPQVKCYMQQL 220
+L HPN+++ R +LY+V ++ + DL +I + Q L E V M QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 221 LSGLQHCHERG-----ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVT 275
L+ CH R +LHRD+K +N+ +D +K+ DFGL+ + + V T
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFVGT 179
Query: 276 LWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSED 335
+Y +PE + Y D+WS GCLL E+ LMP T Q +L G E
Sbjct: 180 PYYMSPE-QMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQK----ELAGKIREG 231
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
++++ P Y E I+T +L L +R + L+N
Sbjct: 232 KFRRI-------PYRYSDELNE-----------IITRMLNLKDYHRPSVEEILEN 268
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 105 VPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
+P A+ Y+ L +G G+Y K R + GKI+ K++ + + + + E+ +L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKII---CRPGQKLTEPQVKCYMQQL 220
+L HPN+++ R +LY+V ++ + DL +I + Q L E V M QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 221 LSGLQHCHERG-----ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVT 275
L+ CH R +LHRD+K +N+ +D +K+ DFGL+ + + V T
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGT 179
Query: 276 LWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSED 335
+Y +PE + Y D+WS GCLL E+ LMP T Q +L G E
Sbjct: 180 PYYMSPE-QMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQK----ELAGKIREG 231
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
++++ P Y E I+T +L L +R + L+N
Sbjct: 232 KFRRI-------PYRYSDELNE-----------IITRMLNLKDYHRPSVEEILEN 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 105 VPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
+P A+ Y+ L +G G+Y K R + GKI+ K++ + + + + E+ +L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKII---CRPGQKLTEPQVKCYMQQL 220
+L HPN+++ R +LY+V ++ + DL +I + Q L E V M QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 221 LSGLQHCHERG-----ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVT 275
L+ CH R +LHRD+K +N+ +D +K+ DFGL+ + + V T
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDEDFAKEFVGT 179
Query: 276 LWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSED 335
+Y +PE + Y D+WS GCLL E+ LMP T Q +L G E
Sbjct: 180 PYYMSPE-QMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQK----ELAGKIREG 231
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
++++ P Y E I+T +L L +R + L+N
Sbjct: 232 KFRRI-------PYRYSDELNE-----------IITRMLNLKDYHRPSVEEILEN 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L+ TL Y PE++ G + +DL
Sbjct: 135 IKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG---TLDYLPPEMIEGRM-HDEKVDL 190
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 102 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 159
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S P + T+ TL Y PE++ G + +DL
Sbjct: 160 IKPENLLLGSAGELKIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 215
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM-HDEKVDL 192
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 93 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 150
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 151 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 206
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 207 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 102 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 159
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM-HDEKVDL 215
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 15/226 (6%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKF-MAREIRILQK 165
+ + +D +G+G + NVY AR+R + I+ALK V F T E V+ + RE+ I
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALK-VLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 166 LDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLT---EPQVKCYMQQLLS 222
L HPN+++L G + +YL+ ++ + R QKL+ E + Y+ +L +
Sbjct: 69 LRHPNILRLYGYFHDATR--VYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L +CH + ++HRDIK NLL+ +G LKIADFG S ++ L TL Y PE
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPE 180
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
++ G + +DLWS G L E +G P T E RI ++
Sbjct: 181 MIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM-HDEKVDL 189
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T E RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++++ I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 76 YFHDSTR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM-HDEKVDL 189
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T + RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 15/226 (6%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKF-MAREIRILQK 165
+ + +D +G+G + NVY AR+R + I+ALK V F T E V+ + RE+ I
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALK-VLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 166 LDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLT---EPQVKCYMQQLLS 222
L HPN+++L G + +YL+ ++ + R QKL+ E + Y+ +L +
Sbjct: 69 LRHPNILRLYGYFHDATR--VYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
L +CH + ++HRDIK NLL+ +G LKIADFG S + T+ TL Y PE
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPE 180
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
++ G + +DLWS G L E +G P T E RI ++
Sbjct: 181 MIEGRM-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG---TLDYLPPEMIEGRM-HDEKVDL 194
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRM-HDEKVDL 190
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTELCG---TLDYLPPEMIEGRM-HDEKVDL 189
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG---TLDYLPPEMIEGRM-HDEKVDL 190
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG---TLDYLPPEMIEGRM-HDEKVDL 194
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 78 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 135
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 136 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-HDEKVDL 191
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG---TLDYLPPEMIEGRM-HDEKVDL 189
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 80 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 138 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 193
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 194 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 75 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 132
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 133 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 188
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T E RI
Sbjct: 189 WSLGVLCYEFLVGKPPFEANTYQETYKRI 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 124/235 (52%), Gaps = 24/235 (10%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRD---TGKIVALKKVRFD----TSEPESV-KF--- 155
K +SY K+ K+G G Y V ++++ I +KK +FD + + +++ KF
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 156 MAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQV 213
+ EI +L+ LDHPN+IKL + + + YLV +F + +II R K E
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDKKYF--YLVTEFYEGGELFEQIINR--HKFDECDA 148
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGML---KIADFGLSNFFIPKQKGPLT 270
M+Q+LSG+ + H+ I+HRDIK N+L++ L KI DFGLS+FF K L
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK--LR 206
Query: 271 SRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
R+ T +Y APE+L Y D+WS G ++ + G P G+ + + + ++
Sbjct: 207 DRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T E RI
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM-HDEKVDL 192
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG---TLDYLPPEMIEGRM-HDEKVDL 189
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE + G + +DL
Sbjct: 139 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRX-HDEKVDL 194
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-HDEKVDL 192
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T E RI
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-HDEKVDL 189
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T E RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S ++ L TL Y PE++ G + +DL
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCG---TLDYLPPEMIEGRM-HDEKVDL 189
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T E RI
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 78 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 135
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIA+FG S + T+ TL Y PE++ G + +DL
Sbjct: 136 IKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 191
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
WS G L E +G+P T E RI ++
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 16/220 (7%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEP-ESVKFMAREIRILQKLDHPN 170
+ L ++G G++ VY ARD ++VA+KK+ + + E + + +E+R LQKL HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 171 VIKLEGLATSRMQYSLYLVFDFM---QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I+ G +++ +LV ++ SDL ++ +P L E ++ L GL +
Sbjct: 116 TIQYRGCYLR--EHTAWLVMEYCLGSASDLLEVHKKP---LQEVEIAAVTHGALQGLAYL 170
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H ++HRD+KA N+L+ + G++K+ DFG ++ P V T ++ APE++L
Sbjct: 171 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-----APANXFVGTPYWMAPEVILAM 225
Query: 288 TD--YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
+ Y +D+WS G E+ +P + + L+ I
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 73 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 130
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIADFG S + T+ TL Y PE++ G + +DL
Sbjct: 131 IKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 186
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T E RI
Sbjct: 187 WSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G + NVY AR++ + I+ALK + E V+ + RE+ I L HPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ +YL+ ++ + K E + Y+ +L + L +CH + ++HRD
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
IK NLL+ +G LKIA+FG S + T+ TL Y PE++ G + +DL
Sbjct: 137 IKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 297 WSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
WS G L E +G+P T E RI
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 149/306 (48%), Gaps = 39/306 (12%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
+D Y +G+G++ V +D+ TG+ A+K + + + + + RE+++L++LD
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++KL + + YLV + +II R ++ +E ++Q+LSG+
Sbjct: 109 HPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGIT 164
Query: 226 HCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K NLL++ K ++I DFGLS F +K + ++ T +Y APE
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPE 222
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+L G+ Y D+WS G +L + G P G E + L ++ K T WKK+
Sbjct: 223 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV-- 278
Query: 343 TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEF---FNASPLA 399
S+ ++ +L P+ R +A AL +E+ + ++
Sbjct: 279 --------------------SESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 318
Query: 400 CDLSSL 405
D+ SL
Sbjct: 319 VDVPSL 324
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 16/220 (7%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEP-ESVKFMAREIRILQKLDHPN 170
+ L ++G G++ VY ARD ++VA+KK+ + + E + + +E+R LQKL HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 171 VIKLEGLATSRMQYSLYLVFDFM---QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
I+ G +++ +LV ++ SDL ++ +P L E ++ L GL +
Sbjct: 77 TIQYRGCYLR--EHTAWLVMEYCLGSASDLLEVHKKP---LQEVEIAAVTHGALQGLAYL 131
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H ++HRD+KA N+L+ + G++K+ DFG ++ P V T ++ APE++L
Sbjct: 132 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-----APANXFVGTPYWMAPEVILAM 186
Query: 288 TD--YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
+ Y +D+WS G E+ +P + + L+ I
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 149/306 (48%), Gaps = 39/306 (12%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
+D Y +G+G++ V +D+ TG+ A+K + + + + + RE+++L++LD
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++KL + + YLV + +II R ++ +E ++Q+LSG+
Sbjct: 108 HPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGIT 163
Query: 226 HCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K NLL++ K ++I DFGLS F +K + ++ T +Y APE
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPE 221
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+L G+ Y D+WS G +L + G P G E + L ++ K T WKK+
Sbjct: 222 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV-- 277
Query: 343 TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEF---FNASPLA 399
S+ ++ +L P+ R +A AL +E+ + ++
Sbjct: 278 --------------------SESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 317
Query: 400 CDLSSL 405
D+ SL
Sbjct: 318 VDVPSL 323
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 149/306 (48%), Gaps = 39/306 (12%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
+D Y +G+G++ V +D+ TG+ A+K + + + + + RE+++L++LD
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++KL + + YLV + +II R ++ +E ++Q+LSG+
Sbjct: 85 HPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGIT 140
Query: 226 HCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K NLL++ K ++I DFGLS F +K + ++ T +Y APE
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPE 198
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+L G+ Y D+WS G +L + G P G E + L ++ K T WKK+
Sbjct: 199 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV-- 254
Query: 343 TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEF---FNASPLA 399
S+ ++ +L P+ R +A AL +E+ + ++
Sbjct: 255 --------------------SESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 294
Query: 400 CDLSSL 405
D+ SL
Sbjct: 295 VDVPSL 300
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 139/293 (47%), Gaps = 39/293 (13%)
Query: 106 PKSADSY-DKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
P SY D K+G+G+ V A R +GK+VA+KK+ D + + + + E+ I++
Sbjct: 146 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMR 203
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSG 223
H NV+++ + + L++V +F++ LT I+ ++ E Q+ +L
Sbjct: 204 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQA 259
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF---IPKQKGPLTSRVVTLWYRA 280
L H +G++HRDIK+ ++L+ G +K++DFG +P++K V T ++ A
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK----XLVGTPYWMA 315
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE L+ YG +D+WS G ++ EM G P F +E K M
Sbjct: 316 PE-LISRLPYGPEVDIWSLGIMVIEMVDGEP------------PYF------NEPPLKAM 356
Query: 341 KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
K+ P K + PS G L LL DPA R TAA L++ F
Sbjct: 357 KMIRDNLPPRLK-----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 139/293 (47%), Gaps = 39/293 (13%)
Query: 106 PKSADSY-DKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
P SY D K+G+G+ V A R +GK+VA+KK+ D + + + + E+ I++
Sbjct: 69 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMR 126
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSG 223
H NV+++ + + L++V +F++ LT I+ ++ E Q+ +L
Sbjct: 127 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQA 182
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF---IPKQKGPLTSRVVTLWYRA 280
L H +G++HRDIK+ ++L+ G +K++DFG +P++K V T ++ A
Sbjct: 183 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK----XLVGTPYWMA 238
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE L+ YG +D+WS G ++ EM G P F +E K M
Sbjct: 239 PE-LISRLPYGPEVDIWSLGIMVIEMVDGEP------------PYF------NEPPLKAM 279
Query: 341 KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
K+ P K + PS G L LL DPA R TAA L++ F
Sbjct: 280 KMIRDNLPPRLK-----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 106 PKSADSY-DKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
P SY D K+G+G+ V A R +GK+VA+KK+ D + + + + E+ I++
Sbjct: 24 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMR 81
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSG 223
H NV+++ + + L++V +F++ LT I+ ++ E Q+ +L
Sbjct: 82 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQA 137
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF---IPKQKGPLTSRVVTLWYRA 280
L H +G++HRDIK+ ++L+ G +K++DFG +P++K V T ++ A
Sbjct: 138 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK----XLVGTPYWMA 193
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE L+ YG +D+WS G ++ EM G P +E K M
Sbjct: 194 PE-LISRLPYGPEVDIWSLGIMVIEMVDGEP------------------PYFNEPPLKAM 234
Query: 341 KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
K+ P K + PS G L LL DPA R TAA L++ F
Sbjct: 235 KMIRDNLPPRLKN-----LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 106 PKSADSY-DKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
P SY D K+G+G+ V A R +GK+VA+KK+ D + + + + E+ I++
Sbjct: 26 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMR 83
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSG 223
H NV+++ + + L++V +F++ LT I+ ++ E Q+ +L
Sbjct: 84 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQA 139
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF---IPKQKGPLTSRVVTLWYRA 280
L H +G++HRDIK+ ++L+ G +K++DFG +P++K V T ++ A
Sbjct: 140 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK----XLVGTPYWMA 195
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE L+ YG +D+WS G ++ EM G P +E K M
Sbjct: 196 PE-LISRLPYGPEVDIWSLGIMVIEMVDGEP------------------PYFNEPPLKAM 236
Query: 341 KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
K+ P K + PS G L LL DPA R TAA L++ F
Sbjct: 237 KMIRDNLPPRLKN-----LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 106 PKSADSY-DKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
P SY D K+G+G+ V A R +GK+VA+KK+ D + + + + E+ I++
Sbjct: 15 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMR 72
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSG 223
H NV+++ + + L++V +F++ LT I+ ++ E Q+ +L
Sbjct: 73 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQA 128
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF---IPKQKGPLTSRVVTLWYRA 280
L H +G++HRDIK+ ++L+ G +K++DFG +P++K V T ++ A
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK----XLVGTPYWMA 184
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE L+ YG +D+WS G ++ EM G P +E K M
Sbjct: 185 PE-LISRLPYGPEVDIWSLGIMVIEMVDGEP------------------PYFNEPPLKAM 225
Query: 341 KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
K+ P K + PS G L LL DPA R TAA L++ F
Sbjct: 226 KMIRDNLPPRLKN-----LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 33/289 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
++ + ++G G + VYKA++++TG + A K + +T E ++ EI IL DHP +
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHPYI 70
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
+KL L L+++ +F + I+ + LTEPQ++ +Q+L L H +
Sbjct: 71 VKL--LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL----LG 286
I+HRD+KA N+L+ G +++ADFG+S + K S + T ++ APE++ +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL-KTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
T Y D+WS G L EM + P E+ + + K+ K T
Sbjct: 188 DTPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIA---------KSDPPTLL 235
Query: 347 RPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
P + FR+ L L +P R +AA L++ F ++
Sbjct: 236 TPSKWSVEFRD-----------FLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 106 PKSADSY-DKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
P SY D K+G+G+ V A R +GK+VA+KK+ D + + + + E+ I++
Sbjct: 19 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMR 76
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSG 223
H NV+++ + + L++V +F++ LT I+ ++ E Q+ +L
Sbjct: 77 DYQHENVVEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQA 132
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF---IPKQKGPLTSRVVTLWYRA 280
L H +G++HRDIK+ ++L+ G +K++DFG +P++K V T ++ A
Sbjct: 133 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK----XLVGTPYWMA 188
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE L+ YG +D+WS G ++ EM G P +E K M
Sbjct: 189 PE-LISRLPYGPEVDIWSLGIMVIEMVDGEP------------------PYFNEPPLKAM 229
Query: 341 KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
K+ P K + PS G L LL DPA R TAA L++ F
Sbjct: 230 KMIRDNLPPRLKN-----LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 33/289 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
++ + ++G G + VYKA++++TG + A K + +T E ++ EI IL DHP +
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHPYI 78
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
+KL L L+++ +F + I+ + LTEPQ++ +Q+L L H +
Sbjct: 79 VKL--LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL----LG 286
I+HRD+KA N+L+ G +++ADFG+S + K S + T ++ APE++ +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL-KTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
T Y D+WS G L EM + P E+ + + K+ K T
Sbjct: 196 DTPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIA---------KSDPPTLL 243
Query: 347 RPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
P + FR+ L L +P R +AA L++ F ++
Sbjct: 244 TPSKWSVEFRD-----------FLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 36/293 (12%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
+D Y +G+G++ V +D+ TG+ A+K + + + + + RE+++L++LD
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN++KL + + YLV + +II R ++ +E ++Q+LSG+
Sbjct: 91 HPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGIT 146
Query: 226 HCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K NLL++ K ++I DFGLS F +K + ++ T +Y APE
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPE 204
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+L G+ Y D+WS G +L + G P G E + L ++ K T WKK+
Sbjct: 205 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV-- 260
Query: 343 TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNA 395
S+ ++ +L P+ R +A AL +E+
Sbjct: 261 --------------------SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 32/284 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVK-FMAREIRILQKLDHP 169
+Y + +G+G++ V A TG+ VALK + ++ + REI L+ L HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++IKL + S+ + + +V ++ ++L I + K++E + + + QQ++S +++CH
Sbjct: 75 HIIKLYDVIKSKDE--IIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHR 131
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
I+HRD+K NLL+D+ +KIADFGLSN I L + + Y APE++ G
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L M R P +D +
Sbjct: 190 AGPEVDVWSCGVILYVMLCRR--------------------LPFDDESIPVLFKNISNGV 229
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ P F P + G++ +L ++P R + +Q+++F
Sbjct: 230 YTLPKF------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 267
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 32/284 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVK-FMAREIRILQKLDHP 169
+Y + +G+G++ V A TG+ VALK + ++ + REI L+ L HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++IKL + S+ + + +V ++ ++L I + K++E + + + QQ++S +++CH
Sbjct: 69 HIIKLYDVIKSKDE--IIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHR 125
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
I+HRD+K NLL+D+ +KIADFGLSN I L + + Y APE++ G
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L M R P +D +
Sbjct: 184 AGPEVDVWSCGVILYVMLCRR--------------------LPFDDESIPVLFKNISNGV 223
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ P F P + G++ +L ++P R + +Q+++F
Sbjct: 224 YTLPKF------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 32/284 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVK-FMAREIRILQKLDHP 169
+Y + +G+G++ V A TG+ VALK + ++ + REI L+ L HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++IKL + S+ + + +V ++ ++L I + K++E + + + QQ++S +++CH
Sbjct: 65 HIIKLYDVIKSKDE--IIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHR 121
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
I+HRD+K NLL+D+ +KIADFGLSN I L + + Y APE++ G
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L M R P +D +
Sbjct: 180 AGPEVDVWSCGVILYVMLCRR--------------------LPFDDESIPVLFKNISNGV 219
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ P F P + G++ +L ++P R + +Q+++F
Sbjct: 220 YTLPKF------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 257
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 32/284 (11%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVK-FMAREIRILQKLDHP 169
+Y + +G+G++ V A TG+ VALK + ++ + REI L+ L HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++IKL + S+ + + +V ++ ++L I + K++E + + + QQ++S +++CH
Sbjct: 74 HIIKLYDVIKSKDE--IIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHR 130
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
I+HRD+K NLL+D+ +KIADFGLSN I L + + Y APE++ G
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
G +D+WS G +L M R P +D +
Sbjct: 189 AGPEVDVWSCGVILYVMLCRR--------------------LPFDDESIPVLFKNISNGV 228
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ P F P + G++ +L ++P R + +Q+++F
Sbjct: 229 YTLPKF------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++ + ++G G + VYKA++++T + A K + DT E ++ EI IL DHP
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
N++KL L + +L+++ +F + ++ + LTE Q++ +Q L L + H
Sbjct: 95 NIVKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR---VVTLWYRAPELLL 285
+ I+HRD+KA N+L G +K+ADFG+S K + R + T ++ APE+++
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVVM 208
Query: 286 GSTD----YGVGIDLWSAGCLLAEM 306
T Y D+WS G L EM
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++ + ++G G + VYKA++++T + A K + DT E ++ EI IL DHP
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
N++KL L + +L+++ +F + ++ + LTE Q++ +Q L L + H
Sbjct: 95 NIVKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR---VVTLWYRAPELLL 285
+ I+HRD+KA N+L G +K+ADFG+S K + R + T ++ APE+++
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVVM 208
Query: 286 GSTD----YGVGIDLWSAGCLLAEM 306
T Y D+WS G L EM
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++ + ++G G + VYKA++++T + A K + DT E ++ EI IL DHP
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
N++KL L + +L+++ +F + ++ + LTE Q++ +Q L L + H
Sbjct: 95 NIVKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR---VVTLWYRAPELLL 285
+ I+HRD+KA N+L G +K+ADFG+S K + R + T ++ APE+++
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVM 208
Query: 286 GSTD----YGVGIDLWSAGCLLAEM 306
T Y D+WS G L EM
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 60
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 61 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 45/284 (15%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G GT+ V + TG VA+K + R + V + REI+ L+ HP++IKL
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+ ++ +++V +++ +L IC+ G +L E + + QQ+LSG+ +CH ++HR
Sbjct: 84 VIST--PSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGID 295
D+K N+L+D KIADFGLSN + L + Y APE++ G G +D
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRXSCGSPNYAAPEVISGRLYAGPEVD 198
Query: 296 LWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGT-PSED-----YWKKMKLTTTFRPQ 349
+WS+G +L + LCGT P +D +KK+ + PQ
Sbjct: 199 IWSSGVILYAL---------------------LCGTLPFDDDHVPTLFKKICDGIFYTPQ 237
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ PS +L +L +DP R T ++E+F
Sbjct: 238 YLNPSV-----------ISLLKHMLQVDPMKRATIKDIREHEWF 270
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 39/306 (12%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
+D Y +G+G++ V +D+ TG+ A+K + + + + + RE+++L++LD
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN+ KL + + YLV + +II R ++ +E ++Q+LSG+
Sbjct: 85 HPNIXKLYEFFEDKGYF--YLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGIT 140
Query: 226 HCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
+ H+ I+HRD+K NLL++ K ++I DFGLS F +K ++ T +Y APE
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXK--DKIGTAYYIAPE 198
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
+L G+ Y D+WS G +L + G P G E + L ++ K T WKK+
Sbjct: 199 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV-- 254
Query: 343 TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEF---FNASPLA 399
S+ ++ L P+ R +A AL +E+ + ++
Sbjct: 255 --------------------SESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQIS 294
Query: 400 CDLSSL 405
D+ SL
Sbjct: 295 VDVPSL 300
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 38/316 (12%)
Query: 98 KEVLAGLV-PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKF 155
KE+ LV P++ Y + +G+G ++ Y+ D DT ++ A K V + +P +
Sbjct: 13 KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK 72
Query: 156 MAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
M+ EI I + LD+P+V+ G +Y+V + + + + + +TEP+ +
Sbjct: 73 MSTEIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRV 273
+M+Q + G+Q+ H ++HRD+K NL ++ +KI DFGL+ F ++K L
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG-- 188
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T Y APE+L + +D+WS GC+L + +G+P E RI
Sbjct: 189 -TPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------- 238
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
KK + + P+H P + ++ +L DP R + A L +EFF
Sbjct: 239 ----KKNEYSV---PRHIN-----------PVASALIRRMLHADPTLRPSVAELLTDEFF 280
Query: 394 NA--SPLACDLSSLPV 407
+ +P+ S L V
Sbjct: 281 TSGYAPMRLPTSCLTV 296
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G Y V A +R T + VA+K V + PE++K +EI I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINAML 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 38/316 (12%)
Query: 98 KEVLAGLV-PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKF 155
KE+ LV P++ Y + +G+G ++ Y+ D DT ++ A K V + +P +
Sbjct: 29 KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK 88
Query: 156 MAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
M+ EI I + LD+P+V+ G +Y+V + + + + + +TEP+ +
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRV 273
+M+Q + G+Q+ H ++HRD+K NL ++ +KI DFGL+ F ++K L
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCG-- 204
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T Y APE+L + +D+WS GC+L + +G+P P T +
Sbjct: 205 -TPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKP--PFETSCLK------------ 248
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ + ++K P+H P + ++ +L DP R + A L +EFF
Sbjct: 249 -ETYIRIKKNEYSVPRHIN-----------PVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 394 NA--SPLACDLSSLPV 407
+ +P+ S L V
Sbjct: 297 TSGYAPMRLPTSCLTV 312
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
Query: 95 NIPKEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDR---DTGKIVALKKVRFDTSEPE 151
+I V AG ++ L +GQG++ V+ R D+G + A+K ++ T +
Sbjct: 13 SITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVR 72
Query: 152 SVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTE 210
E IL ++HP V+KL + + LYL+ DF++ DL + + TE
Sbjct: 73 DRVRTKMERDILADVNHPFVVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTE 129
Query: 211 PQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT 270
VK Y+ +L GL H H GI++RD+K N+L+D+ G +K+ DFGLS I +K
Sbjct: 130 EDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY- 188
Query: 271 SRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
S T+ Y APE ++ + D WS G L+ EM G G+ E + I K
Sbjct: 189 SFCGTVEYMAPE-VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILK 244
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 38/316 (12%)
Query: 98 KEVLAGLV-PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKF 155
KE+ LV P++ Y + +G+G ++ Y+ D DT ++ A K V + +P +
Sbjct: 29 KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK 88
Query: 156 MAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
M+ EI I + LD+P+V+ G +Y+V + + + + + +TEP+ +
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRV 273
+M+Q + G+Q+ H ++HRD+K NL ++ +KI DFGL+ F ++K L
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG-- 204
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T Y APE+L + +D+WS GC+L + +G+P E RI
Sbjct: 205 -TPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------- 254
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
KK + + P+H P + ++ +L DP R + A L +EFF
Sbjct: 255 ----KKNEYSV---PRHIN-----------PVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 394 NA--SPLACDLSSLPV 407
+ +P+ S L V
Sbjct: 297 TSGYAPMRLPTSCLTV 312
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 38/316 (12%)
Query: 98 KEVLAGLV-PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKF 155
KE+ LV P++ Y + +G+G ++ Y+ D DT ++ A K V + +P +
Sbjct: 29 KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK 88
Query: 156 MAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC 215
M+ EI I + LD+P+V+ G +Y+V + + + + + +TEP+ +
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRV 273
+M+Q + G+Q+ H ++HRD+K NL ++ +KI DFGL+ F ++K L
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCG-- 204
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T Y APE+L + +D+WS GC+L + +G+P P T +
Sbjct: 205 -TPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKP--PFETSCLK------------ 248
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ + ++K P+H P + ++ +L DP R + A L +EFF
Sbjct: 249 -ETYIRIKKNEYSVPRHIN-----------PVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 394 NA--SPLACDLSSLPV 407
+ +P+ S L V
Sbjct: 297 TSGYAPMRLPTSCLTV 312
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 37/308 (12%)
Query: 86 DGWPKWLVDNIPKEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRF 145
D W K++ P EV G V D YD L ++G G + V++ ++ TG++ K +
Sbjct: 32 DIWKKYVPQ--PVEVKQGSV---YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI-- 84
Query: 146 DTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRP 204
+T P + EI I+ +L HP +I L + Y + L+ +F+ +L I
Sbjct: 85 NTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK--YEMVLILEFLSGGELFDRIAAE 142
Query: 205 GQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLID--KSGMLKIADFGLSNFFI 262
K++E +V YM+Q GL+H HE I+H DIK N++ + K+ +KI DFGL+
Sbjct: 143 DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202
Query: 263 PKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQL 322
P + +T+ T + APE ++ G D+W+ G L + G G ++E L
Sbjct: 203 PDEIVKVTT--ATAEFAAPE-IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
Query: 323 HRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRG 382
+ + ED F P + + LL +P R
Sbjct: 260 QNVKRCDWEFDED----------------------AFSSVSPEAKDFIKNLLQKEPRKRL 297
Query: 383 TAASALQN 390
T AL++
Sbjct: 298 TVHDALEH 305
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 136/290 (46%), Gaps = 33/290 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y + K+GQG VY A D TG+ VA++++ +P+ + + EI ++++ +PN+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 79
Query: 172 IKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
+ L + + L++V +++ LT ++ + E Q+ ++ L L+ H
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 135
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
++HRDIK+ N+L+ G +K+ DFG P+Q ++ V T ++ APE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKA-Y 193
Query: 291 GVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQH 350
G +D+WS G + EM G P + L+ I GTP + KL+ FR
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTP--ELQNPEKLSAIFR--- 247
Query: 351 YKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN-ASPLA 399
L L +D RG+A LQ++F A PL+
Sbjct: 248 -----------------DFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 10/204 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
P ++KLE + + +LY+V ++M D+ + R G + +EP + Y Q++ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H +++RD+K NLLID+ G +K+ADFG F + KG T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 33/290 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y + K+GQG VY A D TG+ VA++++ +P+ + + EI ++++ +PN+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 79
Query: 172 IKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
+ L + + L++V +++ LT ++ + E Q+ ++ L L+ H
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 135
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
++HRDIK+ N+L+ G +K+ DFG P+Q + V T ++ APE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTRKA-Y 193
Query: 291 GVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQH 350
G +D+WS G + EM G P + L+ I GTP + KL+ FR
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTP--ELQNPEKLSAIFR--- 247
Query: 351 YKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN-ASPLA 399
L L +D RG+A LQ++F A PL+
Sbjct: 248 -----------------DFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 10/204 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
P ++KLE + + +LY+V ++M D+ + R G + +EP + Y Q++ ++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H +++RD+K NLLID+ G +K+ADFG F + KG T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFG----FAKRVKGRTWXLCGTPEYLAPEIIL-S 212
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 33/290 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y + K+GQG VY A D TG+ VA++++ +P+ + + EI ++++ +PN+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 79
Query: 172 IKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
+ L + + L++V +++ LT ++ + E Q+ ++ L L+ H
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 135
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
++HRDIK+ N+L+ G +K+ DFG P+Q + V T ++ APE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSEMVGTPYWMAPEVVTRKA-Y 193
Query: 291 GVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQH 350
G +D+WS G + EM G P + L+ I GTP + KL+ FR
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTP--ELQNPEKLSAIFR--- 247
Query: 351 YKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN-ASPLA 399
L L +D RG+A LQ++F A PL+
Sbjct: 248 -----------------DFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 106/194 (54%), Gaps = 6/194 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKLDHPNVIKLEG 176
+G+G++ V A T + VALK + + + + REI L+ L HP++IKL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+ T+ + +V ++ +L I +++TE + + + QQ++ +++CH I+HRD
Sbjct: 77 VITTPT--DIVMVIEYAGGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 237 IKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDL 296
+K NLL+D + +KIADFGLSN I L + + Y APE++ G G +D+
Sbjct: 134 LKPENLLLDDNLNVKIADFGLSN--IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDV 191
Query: 297 WSAGCLLAEMFIGR 310
WS G +L M +GR
Sbjct: 192 WSCGIVLYVMLVGR 205
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
+G G +S V+ + R TGK+ ALK ++ + +S + EI +L+K+ H N++ LE +
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS--LENEIAVLKKIKHENIVTLEDI 74
Query: 178 ATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
S Y YLV + +L I G TE +QQ+LS +++ HE GI+HRD
Sbjct: 75 YESTTHY--YLVMQLVSGGELFDRILERGV-YTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 237 IKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
+K NLL +++ + I DFGLS +Q G +++ T Y APE +L Y
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPE-VLAQKPYSKA 187
Query: 294 IDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
+D WS G + + G P TE + +I
Sbjct: 188 VDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 33/290 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y + K+GQG VY A D TG+ VA++++ +P+ + + EI ++++ +PN+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 80
Query: 172 IKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
+ L + + L++V +++ LT ++ + E Q+ ++ L L+ H
Sbjct: 81 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 136
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
++HRDIK+ N+L+ G +K+ DFG P+Q + V T ++ APE++ Y
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTRKA-Y 194
Query: 291 GVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQH 350
G +D+WS G + EM G P + L+ I GTP + KL+ FR
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTP--ELQNPEKLSAIFR--- 248
Query: 351 YKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN-ASPLA 399
L L +D RG+A +Q++F A PL+
Sbjct: 249 -----------------DFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLS 281
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 128/294 (43%), Gaps = 38/294 (12%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG-----KIVALKKVRFDTSEPESVKFMAR-EIRILQK 165
YD +G+G S V + R TG KI+ + R + E V+ R E IL++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 166 L-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGL 224
+ HP++I L + + ++LVFD M+ L+E + + M+ LL +
Sbjct: 156 VAGHPHIITL--IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
H I+HRD+K N+L+D + ++++DFG S P +K L T Y APE+L
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEIL 271
Query: 285 LGSTD-----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKK 339
S D YG +DLW+ G +L + G P R ++ L I + S W
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDD 331
Query: 340 MKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
T +++ LL +DP R TA ALQ+ FF
Sbjct: 332 RSSTVK----------------------DLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKL 166
+ +D + +G+G V A +R T + VA+K V + PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
+H NV+K G R YL ++ P + EP + + QL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLL 285
H GI HRDIK NLL+D+ LKI+DFGL+ F + L +++ TL Y APELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
+ +D+WS G +L M G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 141/293 (48%), Gaps = 41/293 (13%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV---RFDTSEPESVKFMAREIRILQKL 166
D Y+ +G+G +S V + +R+TG+ A+K V +F +S S + + RE I L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICR---PGQKLTEPQVKCYMQQLLS 222
HP++++L L T LY+VF+FM +DL I + G +E YM+Q+L
Sbjct: 84 KHPHIVEL--LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 223 GLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTS--RVVTLW 277
L++CH+ I+HRD+K N+L+ + S +K+ DFG++ I + L + RV T
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA---IQLGESGLVAGGRVGTPH 198
Query: 278 YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW 337
+ APE ++ YG +D+W G +L + G +P Y
Sbjct: 199 FMAPE-VVKREPYGKPVDVWGCGVILFILLSG--CLPF--------------------YG 235
Query: 338 KKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
K +L YK + R+ + S+ ++ +L LDPA R T AL +
Sbjct: 236 TKERLFEGIIKGKYKMNPRQ-WSHISESAKDLVRRMLMLDPAERITVYEALNH 287
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 158 REIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQK-LTEPQVKCY 216
+EI IL+KLDHPNV+KL + + LY+VF+ + ++ P K L+E Q + Y
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ--GPVMEVPTLKPLSEDQARFY 142
Query: 217 MQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTL 276
Q L+ G+++ H + I+HRDIK SNLL+ + G +KIADFG+SN F L++ V T
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTVGTP 201
Query: 277 WYRAPELLLGSTDY--GVGIDLWSAGCLLAEMFIGR-PLMPGR 316
+ APE L + G +D+W+ G L G+ P M R
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 33/290 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y + K+GQG VY A D TG+ VA++++ +P+ + + EI ++++ +PN+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKK-ELIINEILVMRENKNPNI 80
Query: 172 IKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
+ L + + L++V +++ LT ++ + E Q+ ++ L L+ H
Sbjct: 81 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 136
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
++HR+IK+ N+L+ G +K+ DFG P+Q ++ V T ++ APE++ Y
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKA-Y 194
Query: 291 GVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQH 350
G +D+WS G + EM G P + L+ I GTP + KL+ FR
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTP--ELQNPEKLSAIFR--- 248
Query: 351 YKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN-ASPLA 399
L L +D RG+A +Q++F A PL+
Sbjct: 249 -----------------DFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLS 281
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 39/309 (12%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D Y ++G+G +S V + TG+ A K + + + RE RI + L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
N+++L + + YLVFD + I+ R + +E +QQ+L + HC
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILESVNHC 119
Query: 228 HERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
H GI+HRD+K NLL+ K +K+ADFGL+ + + T Y +PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
YG +D+W+ G +L + +G P E HR+++ + D+ T
Sbjct: 179 RKDP-YGKPVDMWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 345 TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSS 404
T P + ++ +L ++PA R TA+ AL++ P C S+
Sbjct: 234 T------------------PEAKDLINKMLTINPAKRITASEALKH------PWICQRST 269
Query: 405 LPVICREED 413
+ + ++
Sbjct: 270 VASMMHRQE 278
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
+D YD + +G G + RD+ T ++VA+K + + E+V+ REI + L H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---REIINHRSLRH 75
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN+++ + + + L ++ ++ +L + IC G + +E + + + QQLLSG+ +C
Sbjct: 76 PNIVRFKEVILTPTH--LAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYC 132
Query: 228 HERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H I HRD+K N L+D S LKI DFG S + + S V T Y APE+LL
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLL 190
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
G D+WS G L M +G
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 50/309 (16%)
Query: 97 PKEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFM 156
P+E LA + K+G+G+ V A ++ TGK VA+KK+ D + + + +
Sbjct: 43 PREYLANFI-----------KIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELL 89
Query: 157 AREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKC 215
E+ I++ H NV+ + ++ + L++V +F++ LT I+ ++ E Q+
Sbjct: 90 FNEVVIMRDYHHDNVVDM--YSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAT 145
Query: 216 YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF---IPKQKGPLTSR 272
+L L + H +G++HRDIK+ ++L+ G +K++DFG +PK+K
Sbjct: 146 VCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK----XL 201
Query: 273 VVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTP 332
V T ++ APE ++ YG +D+WS G ++ EM G P ++ + RI
Sbjct: 202 VGTPYWMAPE-VISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPR 260
Query: 333 SEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEF 392
+D K+++ R G L +L +P+ R TA L + F
Sbjct: 261 VKDL---HKVSSVLR--------------------GFLDLMLVREPSQRATAQELLGHPF 297
Query: 393 FN-ASPLAC 400
A P +C
Sbjct: 298 LKLAGPPSC 306
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 102 AGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFD-TSEPESVKFMAREI 160
+ P +D L +G+G+Y+ V R + T +I A+K V+ + ++ E + ++ E
Sbjct: 1 GAMDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEK 60
Query: 161 RIL-QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQ 219
+ Q +HP ++ L + + + L+ V +++ + +KL E + Y +
Sbjct: 61 HVFEQASNHPFLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE 118
Query: 220 LLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWY 278
+ L + HERGI++RD+K N+L+D G +K+ D+G+ + + G TS T Y
Sbjct: 119 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNY 176
Query: 279 RAPELLLGSTDYGVGIDLWSAGCLLAEMFIGR 310
APE+L G DYG +D W+ G L+ EM GR
Sbjct: 177 IAPEILRGE-DYGFSVDWWALGVLMFEMMAGR 207
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +K+ADFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 9/191 (4%)
Query: 121 GTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATS 180
G + VYKA++++T + A K + DT E ++ EI IL DHPN++KL L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKL--LDAF 76
Query: 181 RMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKA 239
+ +L+++ +F + ++ + LTE Q++ +Q L L + H+ I+HRD+KA
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 240 SNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD----YGVGID 295
N+L G +K+ADFG+S S + T ++ APE+++ T Y D
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 296 LWSAGCLLAEM 306
+WS G L EM
Sbjct: 197 VWSLGITLIEM 207
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 39/309 (12%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D Y ++G+G +S V + TG+ A K + + + RE RI + L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
N+++L + + YLVFD + I+ R + +E +QQ+L + HC
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILESVNHC 119
Query: 228 HERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
H GI+HRD+K NLL+ K +K+ADFGL+ + + T Y +PE +
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE-V 177
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
L YG +D+W+ G +L + +G P E HR+++ + D+ T
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 345 TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSS 404
T P + ++ +L ++PA R TA+ AL++ P C S+
Sbjct: 234 T------------------PEAKDLINKMLTINPAKRITASEALKH------PWICQRST 269
Query: 405 LPVICREED 413
+ + ++
Sbjct: 270 VASMMHRQE 278
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG + T Y APE++L S
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGATWTLCGTPEYLAPEIIL-SK 234
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYP 257
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 8/203 (3%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFD-TSEPESVKFMAREIRIL-QKLDH 168
+D L +G+G+Y+ V R + T +I A+K V+ + ++ E + ++ E + Q +H
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++ L + + + L+ V +++ + +KL E + Y ++ L + H
Sbjct: 81 PFLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGS 287
ERGI++RD+K N+L+D G +K+ D+G+ + + G TS T Y APE+L G
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNYIAPEILRGE 196
Query: 288 TDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W+ G L+ EM GR
Sbjct: 197 -DYGFSVDWWALGVLMFEMMAGR 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 8/203 (3%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFD-TSEPESVKFMAREIRIL-QKLDH 168
+D L +G+G+Y+ V R + T +I A+K V+ + ++ E + ++ E + Q +H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++ L + + + L+ V +++ + +KL E + Y ++ L + H
Sbjct: 66 PFLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGS 287
ERGI++RD+K N+L+D G +K+ D+G+ + + G TS T Y APE+L G
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNYIAPEILRGE 181
Query: 288 TDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W+ G L+ EM GR
Sbjct: 182 -DYGFSVDWWALGVLMFEMMAGR 203
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 111/197 (56%), Gaps = 8/197 (4%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G+++ VY+A TG VA+K + + + V+ + E++I +L HP++++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+YLV + + ++ + + + +E + + +M Q+++G+ + H GILHR
Sbjct: 79 YFED--SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHR 136
Query: 236 DIKASNLLIDKSGMLKIADFGL-SNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
D+ SNLL+ ++ +KIADFGL + +P +K + T Y +PE+ S +G+
Sbjct: 137 DLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH--YTLCGTPNYISPEIATRSA-HGLES 193
Query: 295 DLWSAGCLLAEMFIGRP 311
D+WS GC+ + IGRP
Sbjct: 194 DVWSLGCMFYTLLIGRP 210
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
+D Y+ + +G G + RD+ + ++VA+K + E+VK REI + L H
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 73
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN+++ + + + L +V ++ +L + IC G + +E + + + QQL+SG+ +C
Sbjct: 74 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 130
Query: 228 HERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H + HRD+K N L+D S LKI DFG S + + S V T Y APE+LL
Sbjct: 131 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLL 188
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
G D+WS G L M +G
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALK---KVRF---DTSEPESVKFMAREIRIL 163
D Y +G G V A +R T K VA+K K +F E + + EI IL
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 164 QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLL 221
+KL+HP +IK++ + Y+V + M+ K++ ++L E K Y Q+L
Sbjct: 69 KKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQML 123
Query: 222 SGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
+Q+ HE GI+HRD+K N+L+ ++ ++KI DFG S I + + + T Y
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLCGTPTY 181
Query: 279 RAPELL--LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPSED 335
APE+L +G+ Y +D WS G +L G P RT+V
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---------------- 225
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+K T ++ P EV+ E + ++ LL +DP R T AL++
Sbjct: 226 ---SLKDQITSGKYNFIP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 274
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALK---KVRF---DTSEPESVKFMAREIRIL 163
D Y +G G V A +R T K VA+K K +F E + + EI IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 164 QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLL 221
+KL+HP +IK++ + Y+V + M+ K++ ++L E K Y Q+L
Sbjct: 70 KKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQML 124
Query: 222 SGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
+Q+ HE GI+HRD+K N+L+ ++ ++KI DFG S I + + + T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLCGTPTY 182
Query: 279 RAPELL--LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPSED 335
APE+L +G+ Y +D WS G +L G P RT+V
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---------------- 226
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+K T ++ P EV+ E + ++ LL +DP R T AL++
Sbjct: 227 ---SLKDQITSGKYNFIP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLAGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 8/202 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFD-TSEPESVKFMAREIRIL-QKLDHP 169
+D L +G+G+Y+ V R + T +I A++ V+ + ++ E + ++ E + Q +HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ L + + + L+ V +++ + +KL E + Y ++ L + HE
Sbjct: 114 FLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGST 288
RGI++RD+K N+L+D G +K+ D+G+ + + G TS T Y APE+L G
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSTFCGTPNYIAPEILRGE- 228
Query: 289 DYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W+ G L+ EM GR
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGR 250
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALK---KVRF---DTSEPESVKFMAREIRIL 163
D Y +G G V A +R T K VA+K K +F E + + EI IL
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 164 QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLL 221
+KL+HP +IK++ + Y+V + M+ K++ ++L E K Y Q+L
Sbjct: 76 KKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQML 130
Query: 222 SGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
+Q+ HE GI+HRD+K N+L+ ++ ++KI DFG S I + + + T Y
Sbjct: 131 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLCGTPTY 188
Query: 279 RAPELL--LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPSED 335
APE+L +G+ Y +D WS G +L G P RT+V
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---------------- 232
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+K T ++ P EV+ E + ++ LL +DP R T AL++
Sbjct: 233 ---SLKDQITSGKYNFIP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALK---KVRF---DTSEPESVKFMAREIRIL 163
D Y +G G V A +R T K VA+K K +F E + + EI IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 164 QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLL 221
+KL+HP +IK++ + Y+V + M+ K++ ++L E K Y Q+L
Sbjct: 70 KKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQML 124
Query: 222 SGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
+Q+ HE GI+HRD+K N+L+ ++ ++KI DFG S I + + + T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLCGTPTY 182
Query: 279 RAPELL--LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPSED 335
APE+L +G+ Y +D WS G +L G P RT+V
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---------------- 226
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+K T ++ P EV+ E + ++ LL +DP R T AL++
Sbjct: 227 ---SLKDQITSGKYNFIP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALK---KVRF---DTSEPESVKFMAREIRIL 163
D Y +G G V A +R T K VA+K K +F E + + EI IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 164 QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLL 221
+KL+HP +IK++ + Y+V + M+ K++ ++L E K Y Q+L
Sbjct: 70 KKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQML 124
Query: 222 SGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
+Q+ HE GI+HRD+K N+L+ ++ ++KI DFG S I + + + T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLCGTPTY 182
Query: 279 RAPELL--LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPSED 335
APE+L +G+ Y +D WS G +L G P RT+V
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---------------- 226
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+K T ++ P EV+ E + ++ LL +DP R T AL++
Sbjct: 227 ---SLKDQITSGKYNFIP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLXGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 34/296 (11%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR 158
E + K +D+YD ++G+G +S V + + TG A K + + + R
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 159 EIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCY 216
E RI +KL HPN+++L + + + YLVFD + I+ R + +E
Sbjct: 78 EARICRKLQHPNIVRLHD--SIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHC 133
Query: 217 MQQLLSGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRV 273
+QQ+L + +CH GI+HR++K NLL+ K +K+ADFGL+
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFA 191
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPS 333
T Y +PE +L Y +D+W+ G +L + +G P E HR++ +
Sbjct: 192 GTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGA 246
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQ 389
DY T T P + ++ ++L ++P R TA AL+
Sbjct: 247 YDYPSPEWDTVT------------------PEAKSLIDSMLTVNPKKRITADQALK 284
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G GT+ V + TG VA+K + R + V + REI+ L+ HP++IKL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+ ++ + ++V +++ +L IC+ G ++ E + + QQ+LS + +CH ++HR
Sbjct: 79 VISTPTDF--FMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGID 295
D+K N+L+D KIADFGLSN + L + + Y APE++ G G +D
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVD 193
Query: 296 LWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGT-PSED-----YWKKMKLTTTFRPQ 349
+WS G +L + LCGT P +D +KK++ + P+
Sbjct: 194 IWSCGVILYAL---------------------LCGTLPFDDEHVPTLFKKIRGGVFYIPE 232
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ S +L +L +DP R T ++E+F
Sbjct: 233 YLNRSVAT-----------LLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 34/288 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
K +D+YD ++G+G +S V + + TG A K + + + RE RI +KL
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGL 224
HPN+++L + + + YLVFD + I+ R + +E +QQ+L +
Sbjct: 63 QHPNIVRLHD--SIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESI 118
Query: 225 QHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+CH GI+HR++K NLL+ K +K+ADFGL+ T Y +P
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 176
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E +L Y +D+W+ G +L + +G P E HR++ + DY
Sbjct: 177 E-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDYPSPEW 231
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQ 389
T T P + ++ ++L ++P R TA AL+
Sbjct: 232 DTVT------------------PEAKSLIDSMLTVNPKKRITADQALK 261
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 234
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYP 257
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 234
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 88 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 200
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYP 223
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 34/288 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
K +D+YD ++G+G +S V + + TG A K + + + RE RI +KL
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGL 224
HPN+++L + + + YLVFD + I+ R + +E +QQ+L +
Sbjct: 62 QHPNIVRLHD--SIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESI 117
Query: 225 QHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+CH GI+HR++K NLL+ K +K+ADFGL+ T Y +P
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 175
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E +L Y +D+W+ G +L + +G P E HR++ + DY
Sbjct: 176 E-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDYPSPEW 230
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQ 389
T T P + ++ ++L ++P R TA AL+
Sbjct: 231 DTVT------------------PEAKSLIDSMLTVNPKKRITADQALK 260
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 34/288 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
K +D+YD ++G+G +S V + + TG A K + + + RE RI +KL
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGL 224
HPN+++L + + + YLVFD + I+ R + +E +QQ+L +
Sbjct: 63 QHPNIVRLHD--SIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESI 118
Query: 225 QHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+CH GI+HR++K NLL+ K +K+ADFGL+ T Y +P
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 176
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E +L Y +D+W+ G +L + +G P E HR++ + DY
Sbjct: 177 E-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDYPSPEW 231
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQ 389
T T P + ++ ++L ++P R TA AL+
Sbjct: 232 DTVT------------------PEAKSLIDSMLTVNPKKRITADQALK 261
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G + +V+ +R +G +K + D S+ + A EI +L+ LDHPN+IK+
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA-EIEVLKSLDHPNIIKI-- 85
Query: 177 LATSRMQYSLYLVFDFMQSD--LTKIICRP--GQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+++Y+V + + L +I+ G+ L+E V M+Q+++ L + H + +
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 233 LHRDIKASNLLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+H+D+K N+L + +KI DFGL+ F K T+ T Y APE+ D
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEHSTNAAGTALYMAPEVF--KRD 201
Query: 290 YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQ 349
D+WSAG ++ + G GT E+ +K T++
Sbjct: 202 VTFKCDIWSAGVVMYFLLTG---------------CLPFTGTSLEEVQQK----ATYKEP 242
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNAS 396
+Y R + P + +L +L DP R +AA L +E+F +
Sbjct: 243 NYAVECRPL----TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P ++KLE + + +LY+V ++ M S L +I + +EP + Y Q++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFSEPHARFYAAQIVLT 154
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +K+ DFG F + KG T Y APE+
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 210
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 211 IL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKL 166
+ + +D L +G+GT+ V R++ TG+ A+K +R + + V E R+LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + L V ++ + TE + + Y +++S L++
Sbjct: 63 RHPFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H R +++RDIK NL++DK G +KI DFGL I + + T Y APE +L
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKTFCGTPEYLAPE-VLE 178
Query: 287 STDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALK---KVRF---DTSEPESVKFMAREIRIL 163
D Y +G G V A +R T K VA++ K +F E + + EI IL
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 164 QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLL 221
+KL+HP +IK++ + Y+V + M+ K++ ++L E K Y Q+L
Sbjct: 195 KKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQML 249
Query: 222 SGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
+Q+ HE GI+HRD+K N+L+ ++ ++KI DFG S I + + + T Y
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLCGTPTY 307
Query: 279 RAPELL--LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPSED 335
APE+L +G+ Y +D WS G +L G P RT+V
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---------------- 351
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+K T ++ P EV+ E + ++ LL +DP R T AL++
Sbjct: 352 ---SLKDQITSGKYNFIP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKL 166
+ + +D L +G+GT+ V R++ TG+ A+K +R + + V E R+LQ
Sbjct: 6 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + L V ++ + TE + + Y +++S L++
Sbjct: 66 RHPFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 123
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H R +++RDIK NL++DK G +KI DFGL I + + T Y APE +L
Sbjct: 124 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKTFCGTPEYLAPE-VLE 181
Query: 287 STDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 10/212 (4%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQ-KLDHPNVIKLE 175
+G+G++ V+ A + T + A+K ++ D + V+ E R+L +HP + +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM- 84
Query: 176 GLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + + +L+ V +++ + K + Y +++ GLQ H +GI++R
Sbjct: 85 -FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 143
Query: 236 DIKASNLLIDKSGMLKIADFGL--SNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
D+K N+L+DK G +KIADFG+ N + T Y APE+LLG Y
Sbjct: 144 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG---TPDYIAPEILLGQK-YNHS 199
Query: 294 IDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
+D WS G LL EM IG+ G+ E E H I
Sbjct: 200 VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 45/284 (15%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G GT+ V + TG VA+K + R + V + REI+ L+ HP++IKL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+ ++ + ++V +++ +L IC+ G ++ E + + QQ+LS + +CH ++HR
Sbjct: 79 VISTPTDF--FMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGID 295
D+K N+L+D KIADFGLSN + L + Y APE++ G G +D
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRDSCGSPNYAAPEVISGRLYAGPEVD 193
Query: 296 LWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGT-PSED-----YWKKMKLTTTFRPQ 349
+WS G +L + LCGT P +D +KK++ + P+
Sbjct: 194 IWSCGVILYAL---------------------LCGTLPFDDEHVPTLFKKIRGGVFYIPE 232
Query: 350 HYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+ S +L +L +DP R T ++E+F
Sbjct: 233 YLNRSVAT-----------LLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALK---KVRF---DTSEPESVKFMAREIRIL 163
D Y +G G V A +R T K VA++ K +F E + + EI IL
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 164 QKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLL 221
+KL+HP +IK++ + Y+V + M+ K++ ++L E K Y Q+L
Sbjct: 209 KKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQML 263
Query: 222 SGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWY 278
+Q+ HE GI+HRD+K N+L+ ++ ++KI DFG S I + + + T Y
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLCGTPTY 321
Query: 279 RAPELL--LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFKLCGTPSED 335
APE+L +G+ Y +D WS G +L G P RT+V
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---------------- 365
Query: 336 YWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+K T ++ P EV+ E + ++ LL +DP R T AL++
Sbjct: 366 ---SLKDQITSGKYNFIP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 414
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 94 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 206
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYP 229
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKL 166
+ + +D L +G+GT+ V R++ TG+ A+K +R + + V E R+LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + L V ++ + TE + + Y +++S L++
Sbjct: 63 RHPFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H R +++RDIK NL++DK G +KI DFGL I + + T Y APE +L
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKTFCGTPEYLAPE-VLE 178
Query: 287 STDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RI Q ++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P ++KLE + + +LY+V ++ M S L +I + +EP + Y Q++
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVLEYAPGGEMFSHLRRI-----GRFSEPHARFYAAQIVLT 154
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NLLID+ G +K+ADFG F + KG T Y APE+
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG----FAKRVKGRTWXLCGTPEYLAPEI 210
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 211 IL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 9/223 (4%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF-MAREIRILQKL 166
+ D ++ +G+G + NVY AR++ + IVALK + E E V+ + REI I L
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL 80
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HPN+++L R + +YL+ ++ + +L K + + E + M++L L
Sbjct: 81 HHPNILRLYNYFYDRRR--IYLILEYAPRGELYKELQK-SCTFDEQRTATIMEELADALM 137
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+CH + ++HRDIK NLL+ G LKIADFG S ++ + TL Y PE++
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCG---TLDYLPPEMIE 194
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
G + +DLW G L E+ +G P + E RI K+
Sbjct: 195 GRM-HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 96 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 208
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYP 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 33/288 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y ++G+G +S V + G+ A K + + + RE RI + L HPN+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++L + + YL+FD + I+ R + +E +QQ+L + HCH+
Sbjct: 84 VRLHDSISEEGHH--YLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQ 139
Query: 230 RGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
G++HRD+K NLL+ K +K+ADFGL+ + ++ T Y +PE +L
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VLR 197
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
YG +DLW+ G +L + +G P E HR+++ + D+ T T
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDFPSPEWDTVT- 252
Query: 347 RPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
P + ++ +L ++P+ R TAA AL++ + +
Sbjct: 253 -----------------PEAKDLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 10/212 (4%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQ-KLDHPNVIKLE 175
+G+G++ V+ A + T + A+K ++ D + V+ E R+L +HP + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM- 83
Query: 176 GLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + + +L+ V +++ + K + Y +++ GLQ H +GI++R
Sbjct: 84 -FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPELLLGSTDYGVG 293
D+K N+L+DK G +KIADFG+ G + T Y APE+LLG Y
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFCGTPDYIAPEILLGQK-YNHS 198
Query: 294 IDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
+D WS G LL EM IG+ G+ E E H I
Sbjct: 199 VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG + T Y APE++L S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWTLCGTPEYLAPEIIL-SK 214
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ +M G P
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYP 236
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
+D Y+ + +G G + RD+ + ++VA+K + +VK REI + L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK---REIINHRSLRH 74
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN+++ + + + L +V ++ +L + IC G + +E + + + QQL+SG+ +C
Sbjct: 75 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 131
Query: 228 HERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H + HRD+K N L+D S LKI DFG S + + S V T Y APE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLL 189
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
G D+WS G L M +G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Query: 103 GLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRI 162
L +S + Y +L K+G+G++ + + G+ +K++ + + RE+ +
Sbjct: 17 NLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAV 76
Query: 163 LQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTK-IICRPGQKLTEPQVKCYMQQL 220
L + HPN+++ + SLY+V D+ + DL K I + G E Q+ + Q+
Sbjct: 77 LANMKHPNIVQYR--ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134
Query: 221 LSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYR 279
L+H H+R ILHRDIK+ N+ + K G +++ DFG++ + L + T +Y
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYL 192
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEM 306
+PE + + Y D+W+ GC+L E+
Sbjct: 193 SPE-ICENKPYNNKSDIWALGCVLYEL 218
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 50/310 (16%)
Query: 102 AGLVPKSA---------DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV---RFDTSE 149
+GLVP+ + D Y+ +G+G +S V + +R+TG+ A+K V +F +S
Sbjct: 9 SGLVPRGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP 68
Query: 150 PESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICR---PG 205
S + + RE I L HP++++L L T LY+VF+FM +DL I + G
Sbjct: 69 GLSTEDLKREASICHMLKHPHIVEL--LETYSSDGMLYMVFEFMDGADLCFEIVKRADAG 126
Query: 206 QKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFI 262
+E YM+Q+L L++CH+ I+HRD+K +L+ + S +K+ FG++ I
Sbjct: 127 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA---I 183
Query: 263 PKQKGPLTS--RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVE 320
+ L + RV T + APE ++ YG +D+W G +L
Sbjct: 184 QLGESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVIL----------------- 225
Query: 321 QLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAY 380
F L Y K +L YK + R+ + S+ ++ +L LDPA
Sbjct: 226 -----FILLSGCLPFYGTKERLFEGIIKGKYKMNPRQ-WSHISESAKDLVRRMLMLDPAE 279
Query: 381 RGTAASALQN 390
R T AL +
Sbjct: 280 RITVYEALNH 289
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P ++KLE + + +LY+V ++ M S L +I + +EP + Y Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFSEPHARFYAAQIVLT 153
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +K+ DFGL+ + KG T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NL+ID+ G +++ DFG F + KG T Y APE+++ S
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIII-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKL 166
+ + +D L +G+GT+ V R++ TG+ A+K +R + + V E R+LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + L V ++ + TE + + Y +++S L++
Sbjct: 63 RHPFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H R +++RDIK NL++DK G +KI DFGL I + T Y APE +L
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKXFCGTPEYLAPE-VLE 178
Query: 287 STDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
+D Y+ + +G G + RD+ ++VA+K + E+VK REI + L H
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN+++ + + + L +V ++ +L + IC G + +E + + + QQL+SG+ +
Sbjct: 75 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYA 131
Query: 228 HERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H + HRD+K N L+D S LKIADFG S + + S V T Y APE+LL
Sbjct: 132 HAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAVGTPAYIAPEVLL 189
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
G D+WS G L M +G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 87 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG + T Y APE++L S
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWTLCGTPEYLAPEIIL-SK 199
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYP 222
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKL 166
+ + +D L +G+GT+ V R++ TG+ A+K +R + + V E R+LQ
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + L V ++ + TE + + Y +++S L++
Sbjct: 68 RHPFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H R +++RDIK NL++DK G +KI DFGL I + T Y APE +L
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKXFCGTPEYLAPE-VLE 183
Query: 287 STDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 29/275 (10%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
K D Y+ + +G+G++ V KA DR + VA+K ++ + + R + ++ K
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH 91
Query: 167 DHPNVIKLEGLATSRM-QYSLYLVFDFMQSDLTKIICRPGQK-LTEPQVKCYMQQLLSGL 224
D + L M + L LVF+ + +L ++ + ++ + + QQ+ + L
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 225 QHCH--ERGILHRDIKASNLLI--DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRA 280
E I+H D+K N+L+ K +KI DFG S + + SR +YR+
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRS 207
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE+LLG Y + ID+WS GC+L EM G PL G EV+Q+++I ++ G P
Sbjct: 208 PEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-------- 258
Query: 341 KLTTTFRPQHY---KPSFREVFGEFPPSSYGILTT 372
P H P R+ F + P ++ + T
Sbjct: 259 -------PAHILDQAPKARKFFEKLPDGTWNLKKT 286
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKL 166
+ + +D L +G+GT+ V R++ TG+ A+K +R + + V E R+LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + L V ++ + TE + + Y +++S L++
Sbjct: 63 RHPFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H R +++RDIK NL++DK G +KI DFGL I + T Y APE +L
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKXFCGTPEYLAPE-VLE 178
Query: 287 STDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKL 166
+ + +D L +G+GT+ V R++ TG+ A+K +R + + V E R+LQ
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + L V ++ + TE + + Y +++S L++
Sbjct: 63 RHPFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H R +++RDIK NL++DK G +KI DFGL I + T Y APE +L
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKXFCGTPEYLAPE-VLE 178
Query: 287 STDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + ++TG A+K + + + + ++ E RILQ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 94 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 206
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYP 229
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P ++KLE + + +LY+V ++ M S L +I + +EP + Y Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFSEPHARFYAAQIVLT 153
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +K+ DFG F + KG T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 98
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQK-GPLTSRVVTLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K S V T Y +PELL +
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS- 216
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 29/275 (10%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
K D Y+ + +G+G++ V KA DR + VA+K ++ + + R + ++ K
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH 110
Query: 167 DHPNVIKLEGLATSRM-QYSLYLVFDFMQSDLTKIICRPGQK-LTEPQVKCYMQQLLSGL 224
D + L M + L LVF+ + +L ++ + ++ + + QQ+ + L
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 225 QHCH--ERGILHRDIKASNLLI--DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRA 280
E I+H D+K N+L+ K +KI DFG S + + SR +YR+
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRS 226
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE+LLG Y + ID+WS GC+L EM G PL G EV+Q+++I ++ G P
Sbjct: 227 PEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-------- 277
Query: 341 KLTTTFRPQHY---KPSFREVFGEFPPSSYGILTT 372
P H P R+ F + P ++ + T
Sbjct: 278 -------PAHILDQAPKARKFFEKLPDGTWNLKKT 305
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 75
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +F+ L + + + +++ ++ Y Q+ G+++
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 192
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 193 TESK-FSVASDVWSFGVVLYELF 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y AP ++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPAIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
Query: 103 GLVPKSADSYDK--------LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEP 150
GLVP+ + + + L ++G+G + +V Y +TG++VA+KK++ T E
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE- 71
Query: 151 ESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLT 209
++ REI IL+ L H N++K +G+ S + +L L+ +++ L + + +++
Sbjct: 72 -HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 210 EPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPK 264
++ Y Q+ G+++ + +HRD+ N+L++ +KI DFGL+ K
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 265 QKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
K P S + WY APE L S + V D+WS G +L E+F
Sbjct: 191 VKEPGESPI--FWY-APESLTESK-FSVASDVWSFGVVLYELF 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 98
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 216
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 9/220 (4%)
Query: 112 YDKLAKVGQGTYSNVY---KARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
++ L +GQG++ V+ K D ++ A+K ++ T + E IL +++H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
P ++KL + + LYL+ DF++ DL + + TE VK Y+ +L L H
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI++RD+K N+L+D+ G +K+ DFGLS I +K S T+ Y APE ++
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPE-VVNR 200
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
+ D WS G L+ EM G G+ E + I K
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
+D Y+ + +G G + RD+ + ++VA+K + E+VK REI + L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN+++ + + + L +V ++ +L + IC G + +E + + + QQL+SG+ +C
Sbjct: 75 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 131
Query: 228 HERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H + HRD+K N L+D S LKI FG S + + S V T Y APE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP--KSTVGTPAYIAPEVLL 189
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
G D+WS G L M +G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 75
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 135 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 193
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 240
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
Query: 103 GLVPKSADSYDK--------LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEP 150
GLVP+ + + + L ++G+G + +V Y +TG++VA+KK++ T E
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE- 71
Query: 151 ESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLT 209
++ REI IL+ L H N++K +G+ S + +L L+ +++ L + + +++
Sbjct: 72 -HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 210 EPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPK 264
++ Y Q+ G+++ + +HRD+ N+L++ +KI DFGL+ K
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 265 QKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
K P S + WY APE L S + V D+WS G +L E+F
Sbjct: 191 VKEPGESPI--FWY-APESLTESK-FSVASDVWSFGVVLYELF 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS- 213
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 29/275 (10%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
K D Y+ + +G+G++ V KA DR + VA+K ++ + + R + ++ K
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH 110
Query: 167 DHPNVIKLEGLATSRM-QYSLYLVFDFMQSDLTKIICRPGQK-LTEPQVKCYMQQLLSGL 224
D + L M + L LVF+ + +L ++ + ++ + + QQ+ + L
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 225 QHCH--ERGILHRDIKASNLLI--DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRA 280
E I+H D+K N+L+ K +KI DFG S + + SR +YR+
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSR----FYRS 226
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
PE+LLG Y + ID+WS GC+L EM G PL G EV+Q+++I ++ G P
Sbjct: 227 PEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-------- 277
Query: 341 KLTTTFRPQHY---KPSFREVFGEFPPSSYGILTT 372
P H P R+ F + P ++ + T
Sbjct: 278 -------PAHILDQAPKARKFFEKLPDGTWNLKKT 305
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 74
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 134 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 192
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 9/220 (4%)
Query: 112 YDKLAKVGQGTYSNVY---KARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
++ L +GQG++ V+ K D ++ A+K ++ T + E IL +++H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
P ++KL + + LYL+ DF++ DL + + TE VK Y+ +L L H
Sbjct: 87 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHL 143
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI++RD+K N+L+D+ G +K+ DFGLS I +K S T+ Y APE ++
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPE-VVNR 201
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
+ D WS G L+ EM G G+ E + I K
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 241
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P ++KLE + + +LY+V ++ M S L +I + EP + Y Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 153
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +K+ DFG F + KG T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 9/220 (4%)
Query: 112 YDKLAKVGQGTYSNVY---KARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
++ L +GQG++ V+ K D ++ A+K ++ T + E IL +++H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
P ++KL + + LYL+ DF++ DL + + TE VK Y+ +L L H
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHL 142
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
H GI++RD+K N+L+D+ G +K+ DFGLS I +K S T+ Y APE ++
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPE-VVNR 200
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
+ D WS G L+ EM G G+ E + I K
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 73
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 133 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 191
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 238
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 177 LATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQK-GPLTSRVVTLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K S V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-SKSS 215
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T Y APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 72
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 132 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 190
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 237
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 109/200 (54%), Gaps = 6/200 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
+ KL K+G+G++ V+K D T K+VA+K + + +E + ++ + +EI +L + D P V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 67
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
K G + L+++ +++ + PG L E Q+ ++++L GL + H
Sbjct: 68 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEK 124
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
+HRDIKA+N+L+ + G +K+ADFG++ Q + V T ++ APE++ S Y
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSA-YD 182
Query: 292 VGIDLWSAGCLLAEMFIGRP 311
D+WS G E+ G P
Sbjct: 183 SKADIWSLGITAIELARGEP 202
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P ++KLE + + +LY+V ++ M S L +I + +EP + Y Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFSEPHARFYAAQIVLT 153
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +++ DFGL+ + KG T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 79
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 139 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 197
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 244
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEG 176
VG GTY VYK R TG++ A+K + E E +K +EI +L+K H N+ G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK---QEINMLKKYSHHRNIATYYG 88
Query: 177 LATSR----MQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHER 230
+ M L+LV +F + +T +I G L E + +++L GL H H+
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTD- 289
++HRDIK N+L+ ++ +K+ DFG+S + + G + + T ++ APE++ +
Sbjct: 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSA-QLDRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 290 ---YGVGIDLWSAGCLLAEMFIGRP 311
Y DLWS G EM G P
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 109/200 (54%), Gaps = 6/200 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
+ KL K+G+G++ V+K D T K+VA+K + + +E + ++ + +EI +L + D P V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 87
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
K G + L+++ +++ + PG L E Q+ ++++L GL + H
Sbjct: 88 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 144
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
+HRDIKA+N+L+ + G +K+ADFG++ Q + V T ++ APE++ S Y
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSA-YD 202
Query: 292 VGIDLWSAGCLLAEMFIGRP 311
D+WS G E+ G P
Sbjct: 203 SKADIWSLGITAIELARGEP 222
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 113 DKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVI 172
D K+G+G+ V AR++ +G+ VA+K + D + + + + E+ I++ H NV+
Sbjct: 48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFNEVVIMRDYQHFNVV 105
Query: 173 KLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
E + + L+++ +F+Q LT I+ + +L E Q+ + +L L + H +G
Sbjct: 106 --EMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQG 161
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFF---IPKQKGPLTSRVVTLWYRAPELLLGST 288
++HRDIK+ ++L+ G +K++DFG +PK+K V T ++ APE++ S
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK----XLVGTPYWMAPEVISRSL 217
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRP 348
Y +D+WS G ++ EM G P + V+ + R L +P K++ R
Sbjct: 218 -YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR---LRDSPPPKLKNSHKVSPVLR- 272
Query: 349 QHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
L +L DP R TA L + F
Sbjct: 273 -------------------DFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 94
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQK-GPLTSRVVTLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K S V T Y +PELL +
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS- 212
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 7/214 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 100
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 160 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 218
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL 328
DLW+ GC++ ++ G P E +I KL
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 252
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
+ KL K+G+G++ V+K D T K+VA+K + + +E + ++ + +EI +L + D P V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 82
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
K G + L+++ +++ + PG L E Q+ ++++L GL + H
Sbjct: 83 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 139
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
+HRDIKA+N+L+ + G +K+ADFG++ Q V T ++ APE++ S Y
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSA-YD 197
Query: 292 VGIDLWSAGCLLAEMFIGRP 311
D+WS G E+ G P
Sbjct: 198 SKADIWSLGITAIELARGEP 217
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 94
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 212
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 33/285 (11%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D YD +G G +S V A D+ T K+VA+K + + E + M EI +L K+ HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
N++ L+ + S LYL+ + +L I G TE + Q+L +++ H
Sbjct: 77 NIVALDDIYESGGH--LYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLH 133
Query: 229 ERGILHRDIKASNLL---IDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+ GI+HRD+K NLL +D+ + I+DFGLS P L++ T Y APE +L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPE-VL 190
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
Y +D WS G + + G P + + +I K YW
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD------- 243
Query: 346 FRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+ S+ + L+ DP R T ALQ+
Sbjct: 244 ---------------DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P ++KLE + + +LY+V ++ M S L +I + +EP + Y Q++
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFSEPHARFYAAQIVLT 153
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +++ DFG F + KG T Y APE+
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 209
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 210 IL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 33/285 (11%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D YD +G G +S V A D+ T K+VA+K + + E + M EI +L K+ HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
N++ L+ + S LYL+ + +L I G TE + Q+L +++ H
Sbjct: 77 NIVALDDIYESGGH--LYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLH 133
Query: 229 ERGILHRDIKASNLL---IDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+ GI+HRD+K NLL +D+ + I+DFGLS P L++ T Y APE +L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPE-VL 190
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
Y +D WS G + + G P + + +I K YW
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD------- 243
Query: 346 FRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+ S+ + L+ DP R T ALQ+
Sbjct: 244 ---------------DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 33/285 (11%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D YD +G G +S V A D+ T K+VA+K + + E + M EI +L K+ HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
N++ L+ + S LYL+ + +L I G TE + Q+L +++ H
Sbjct: 77 NIVALDDIYESGGH--LYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLH 133
Query: 229 ERGILHRDIKASNLL---IDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+ GI+HRD+K NLL +D+ + I+DFGLS P L++ T Y APE +L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPE-VL 190
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
Y +D WS G + + G P + + +I K YW
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD------- 243
Query: 346 FRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+ S+ + L+ DP R T ALQ+
Sbjct: 244 ---------------DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
+D Y+ + +G G + RD+ + ++VA+K + E+VK REI + L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
PN+++ + + + L +V ++ +L + IC G + +E + + + QQL+SG+ +C
Sbjct: 75 PNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 131
Query: 228 HERGILHRDIKASNLLIDKSGM--LKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H + HRD+K N L+D S LKI FG S + + T V T Y APE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPAYIAPEVLL 189
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIG 309
G D+WS G L M +G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P + KLE + + +LY+V ++ M S L +I + +EP + Y Q++
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFSEPHARFYAAQIVLT 154
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +K+ DFG F + KG T Y APE+
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 210
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 211 IL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P + KLE + + +LY+V ++ M S L +I + +EP + Y Q++
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFSEPHARFYAAQIVLT 154
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +K+ DFG F + KG T Y APE+
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 210
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 211 IL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 110/205 (53%), Gaps = 20/205 (9%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 72
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLS-------NFFIPKQKGPLTSRVVTLWYRAPE 282
+ +HRD+ N+L++ +KI DFGL+ FF K K P S + WY APE
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFF--KVKEPGESPI--FWY-APE 187
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMF 307
L S + V D+WS G +L E+F
Sbjct: 188 SLTESK-FSVASDVWSFGVVLYELF 211
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D +D++ +G G++ V + +++G A+K + + + + ++ E RILQ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++KLE + + +LY+V +++ R + +EP + Y Q++ ++ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+++RD+K NLLID+ G +++ DFG F + KG T APE++L S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGRTWXLCGTPEALAPEIIL-SK 213
Query: 289 DYGVGIDLWSAGCLLAEMFIGRP 311
Y +D W+ G L+ EM G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G ++ ++ D DT ++ A K V + +P + M+ EI I + L H +V+ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+++V + + + + + LTEP+ + Y++Q++ G Q+ H ++HRD
Sbjct: 85 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 237 IKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
+K NL +++ +KI DFGL+ + ++K L T Y APE +L + +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFEV 198
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPS 354
D+WS GC++ + +G+P P T + + + ++K P+H
Sbjct: 199 DVWSIGCIMYTLLVGKP--PFETSCLK-------------ETYLRIKKNEYSIPKHIN-- 241
Query: 355 FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSSLPVIC 409
P + ++ +L DP R T L +EFF + + + LP+ C
Sbjct: 242 ---------PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP---ARLPITC 284
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS- 215
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
+ KL K+G+G++ V+K D T K+VA+K + + +E + ++ + +EI +L + D P V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 67
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
K G + L+++ +++ + PG L E Q+ ++++L GL + H
Sbjct: 68 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEK 124
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
+HRDIKA+N+L+ + G +K+ADFG++ Q V T ++ APE++ S Y
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNXFVGTPFWMAPEVIKQSA-YD 182
Query: 292 VGIDLWSAGCLLAEMFIGRP 311
D+WS G E+ G P
Sbjct: 183 SKADIWSLGITAIELARGEP 202
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G ++ ++ D DT ++ A K V + +P + M+ EI I + L H +V+ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+++V + + + + + LTEP+ + Y++Q++ G Q+ H ++HRD
Sbjct: 85 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 237 IKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
+K NL +++ +KI DFGL+ + ++K L T Y APE +L + +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFEV 198
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPS 354
D+WS GC++ + +G+P P T + + + ++K P+H
Sbjct: 199 DVWSIGCIMYTLLVGKP--PFETSCLK-------------ETYLRIKKNEYSIPKHIN-- 241
Query: 355 FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSSLPVIC 409
P + ++ +L DP R T L +EFF + + + LP+ C
Sbjct: 242 ---------PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP---ARLPITC 284
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G ++ ++ D DT ++ A K V + +P + M+ EI I + L H +V+ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+++V + + + + + LTEP+ + Y++Q++ G Q+ H ++HRD
Sbjct: 89 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 237 IKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
+K NL +++ +KI DFGL+ + ++K L T Y APE +L + +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFEV 202
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPS 354
D+WS GC++ + +G+P P T + + + ++K P+H
Sbjct: 203 DVWSIGCIMYTLLVGKP--PFETSCLK-------------ETYLRIKKNEYSIPKHIN-- 245
Query: 355 FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSSLPVIC 409
P + ++ +L DP R T L +EFF + + + LP+ C
Sbjct: 246 ---------PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP---ARLPITC 288
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFD-TSEPESVKFMAREIRILQKL 166
S + L +G G++ V+ R R G+ A+K ++ + + V+ E +L +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP +I++ G Q ++++ D+++ + R Q+ P K Y ++ L++
Sbjct: 64 THPFIIRMWGTFQDAQQ--IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG 286
H + I++RD+K N+L+DK+G +KI DFG + ++P L T Y APE ++
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHIKITDFGFAK-YVPDVTYXLCG---TPDYIAPE-VVS 176
Query: 287 STDYGVGIDLWSAGCLLAEMFIG 309
+ Y ID WS G L+ EM G
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 31/283 (10%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
+ KL ++G+G++ VYK D T ++VA+K + + +E E + +EI +L + D P +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYI 79
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
+ G + L+++ +++ + +PG L E + ++++L GL + H
Sbjct: 80 TRYFGSYLKSTK--LWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSER 136
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
+HRDIKA+N+L+ + G +K+ADFG++ Q V T ++ APE++ S Y
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KRNXFVGTPFWMAPEVIKQSA-YD 194
Query: 292 VGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHY 351
D+WS G E+ G P P LH + L P T QH
Sbjct: 195 FKADIWSLGITAIELAKGEP--PN----SDLHPMRVLFLIPKNS-------PPTLEGQHS 241
Query: 352 KPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
KP F EF + L DP +R TA L+++F
Sbjct: 242 KP-----FKEF-------VEACLNKDPRFRPTAKELLKHKFIT 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G ++ ++ D DT ++ A K V + +P + M+ EI I + L H +V+ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+++V + + + + + LTEP+ + Y++Q++ G Q+ H ++HRD
Sbjct: 83 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 237 IKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
+K NL +++ +KI DFGL+ + ++K L T Y APE +L + +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 196
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPS 354
D+WS GC++ + +G+P P T + + + ++K P+H
Sbjct: 197 DVWSIGCIMYTLLVGKP--PFETSCLK-------------ETYLRIKKNEYSIPKHIN-- 239
Query: 355 FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSSLPVIC 409
P + ++ +L DP R T L +EFF + + + LP+ C
Sbjct: 240 ---------PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP---ARLPITC 282
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 75
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 192
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 193 TESK-FSVASDVWSFGVVLYELF 214
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV---RFDTSEPESVKFMAREIRILQKL 166
D Y+ +G+G +S V + +R+TG+ A+K V +F +S S + + RE I L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICR---PGQKLTEPQVKCYMQQLLS 222
HP++++L L T LY+VF+FM +DL I + G +E YM+Q+L
Sbjct: 84 KHPHIVEL--LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 223 GLQHCHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTS--RVVTLW 277
L++CH+ I+HRD+K +L+ + S +K+ FG++ I + L + RV T
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA---IQLGESGLVAGGRVGTPH 198
Query: 278 YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW 337
+ APE ++ YG +D+W G +L + G +P Y
Sbjct: 199 FMAPE-VVKREPYGKPVDVWGCGVILFILLSG--CLPF--------------------YG 235
Query: 338 KKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
K +L YK + R+ + S+ ++ +L LDPA R T AL +
Sbjct: 236 TKERLFEGIIKGKYKMNPRQ-WSHISESAKDLVRRMLMLDPAERITVYEALNH 287
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 39/301 (12%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D Y +G+G +S V + TG A K + + + RE RI + L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
N+++L + + YLVFD + I+ R + +E +QQ+L + HC
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHC 119
Query: 228 HERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
H+ G++HRD+K NLL+ K +K+ADFGL+ + + T Y +PE+L
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
YG +D+W+ G +L + +G P E H++++ + D+
Sbjct: 179 RKEA-YGKPVDIWACGVILYILLVGYPPFWD----EDQHKLYQQIKAGAYDF-------- 225
Query: 345 TFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSS 404
P P + V P + ++ +L ++PA R TA AL++ P C S+
Sbjct: 226 ---P---SPEWDTV----TPEAKNLINQMLTINPAKRITAHEALKH------PWVCQRST 269
Query: 405 L 405
+
Sbjct: 270 V 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G ++ ++ D DT ++ A K V + +P + M+ EI I + L H +V+ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+++V + + + + + LTEP+ + Y++Q++ G Q+ H ++HRD
Sbjct: 107 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 237 IKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
+K NL +++ +KI DFGL+ + ++K L T Y APE +L + +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 220
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPS 354
D+WS GC++ + +G+P P T + + + ++K P+H
Sbjct: 221 DVWSIGCIMYTLLVGKP--PFETSCLK-------------ETYLRIKKNEYSIPKHIN-- 263
Query: 355 FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSSLPVIC 409
P + ++ +L DP R T L +EFF + + + LP+ C
Sbjct: 264 ---------PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP---ARLPITC 306
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 103
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 220
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 221 TESK-FSVASDVWSFGVVLYELF 242
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 72
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 189
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 190 TESK-FSVASDVWSFGVVLYELF 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 79
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 196
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 197 TESK-FSVASDVWSFGVVLYELF 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 77
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 194
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 195 TESK-FSVASDVWSFGVVLYELF 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 78
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 195
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 196 TESK-FSVASDVWSFGVVLYELF 217
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G ++ ++ D DT ++ A K V + +P + M+ EI I + L H +V+ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
+++V + + + + + LTEP+ + Y++Q++ G Q+ H ++HRD
Sbjct: 109 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 237 IKASNLLIDKSGMLKIADFGLSNF--FIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
+K NL +++ +KI DFGL+ + ++K L T Y APE +L + +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 222
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPS 354
D+WS GC++ + +G+P P T + + + ++K P+H
Sbjct: 223 DVWSIGCIMYTLLVGKP--PFETSCLK-------------ETYLRIKKNEYSIPKHIN-- 265
Query: 355 FREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSSLPVIC 409
P + ++ +L DP R T L +EFF + + + LP+ C
Sbjct: 266 ---------PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP---ARLPITC 308
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 76
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 193
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 194 TESK-FSVASDVWSFGVVLYELF 215
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 18/208 (8%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++++ +G G++ V + +TG A+K + + + + ++ E RILQ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-----MQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
P + KLE + + +LY+V ++ M S L +I + EP + Y Q++
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRI-----GRFXEPHARFYAAQIVLT 154
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
++ H +++RD+K NL+ID+ G +K+ DFG F + KG T Y APE+
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG----FAKRVKGRTWXLCGTPEYLAPEI 210
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+L S Y +D W+ G L+ EM G P
Sbjct: 211 IL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T + LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 70
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 187
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 188 TESK-FSVASDVWSFGVVLYELF 209
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 71
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 188
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 189 TESK-FSVASDVWSFGVVLYELF 210
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 46/217 (21%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-----RFDTSEPESVKFMAREIRILQKLDHPNVI 172
+G+GTY VY RD +A+K++ R+ S+P + EI + + L H N++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY--SQP-----LHEEIALHKHLKHKNIV 82
Query: 173 KLEGLATSRMQYSLYLVFDFMQSDLTKIICR--PGQKLT-------------EPQVKCYM 217
+ G F ++ KI PG L+ E + Y
Sbjct: 83 QYLG--------------SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 218 QQLLSGLQHCHERGILHRDIKASNLLIDK-SGMLKIADFGLSNFFIPKQKGPLTSRVV-T 275
+Q+L GL++ H+ I+HRDIK N+LI+ SG+LKI+DFG S P T T
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGT 186
Query: 276 LWYRAPELL-LGSTDYGVGIDLWSAGCLLAEMFIGRP 311
L Y APE++ G YG D+WS GC + EM G+P
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 72
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 189
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 190 TESK-FSVASDVWSFGVVLYELF 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D YD +G G +S V A D+ T K+VA+K + E + M EI +L K+ HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS-MENEIAVLHKIKHP 76
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
N++ L+ + S LYL+ + +L I G TE + Q+L +++ H
Sbjct: 77 NIVALDDIYESGGH--LYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLH 133
Query: 229 ERGILHRDIKASNLL---IDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
+ GI+HRD+K NLL +D+ + I+DFGLS P L++ T Y APE +L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPE-VL 190
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTT 345
Y +D WS G + + G P + + +I K YW
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD------- 243
Query: 346 FRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+ S+ + L+ DP R T ALQ+
Sbjct: 244 ---------------DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 46/217 (21%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-----RFDTSEPESVKFMAREIRILQKLDHPNVI 172
+G+GTY VY RD +A+K++ R+ S+P + EI + + L H N++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY--SQP-----LHEEIALHKHLKHKNIV 68
Query: 173 KLEGLATSRMQYSLYLVFDFMQSDLTKIICR--PGQKLT-------------EPQVKCYM 217
+ G F ++ KI PG L+ E + Y
Sbjct: 69 QYLG--------------SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 218 QQLLSGLQHCHERGILHRDIKASNLLIDK-SGMLKIADFGLSNFFIPKQKGPLTSRVV-T 275
+Q+L GL++ H+ I+HRDIK N+LI+ SG+LKI+DFG S P T T
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGT 172
Query: 276 LWYRAPELL-LGSTDYGVGIDLWSAGCLLAEMFIGRP 311
L Y APE++ G YG D+WS GC + EM G+P
Sbjct: 173 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 75
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + +++ ++ Y Q+ G+++
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HRD+ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY-APESL 192
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 193 TESK-FSVASDVWSFGVVLYELF 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 33/293 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
+ + Y ++G+G +S V + G+ A + + + RE RI + L
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGL 224
HPN+++L + + YL+FD + I+ R + +E +QQ+L +
Sbjct: 68 KHPNIVRLHDSISEEGHH--YLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAV 123
Query: 225 QHCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
HCH+ G++HR++K NLL+ K +K+ADFGL+ + ++ T Y +P
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSP 182
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E +L YG +DLW+ G +L + +G P E HR+++ + D+
Sbjct: 183 E-VLRKDPYGKPVDLWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF----- 232
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
P P + V P + ++ +L ++P+ R TAA AL++ + +
Sbjct: 233 ------P---SPEWDTV----TPEAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 109/207 (52%), Gaps = 9/207 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARD---RDTGKIVALKKVRFDT--SEPESVKFMAREIRILQ 164
++++ L +G G Y V+ R DTGK+ A+K ++ T + ++ + E ++L+
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 165 KLDH-PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSG 223
+ P ++ L + + L+L+ D++ ++ TE +V+ Y+ +++
Sbjct: 114 HIRQSPFLVTLH--YAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
L+H H+ GI++RDIK N+L+D +G + + DFGLS F+ + T+ Y AP++
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 284 LL-GSTDYGVGIDLWSAGCLLAEMFIG 309
+ G + + +D WS G L+ E+ G
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 7/227 (3%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G++S V AR+ T + A+K + + + V ++ RE ++ +LDHP +KL
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 102
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+ LY + ++ +L K I + G E + Y +++S L++ H +GI+HR
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGVGI 294
D+K N+L+++ ++I DFG + P+ K + V T Y +PELL +
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 220
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
DLW+ GC++ ++ G P E +I KL E ++ K +
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 267
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 42/306 (13%)
Query: 89 PKWLVDNIPKEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS 148
P + +D ++ L+ D ++ +++G+G S VY+ + + T K ALK ++
Sbjct: 39 PDYWIDGSNRDALS-------DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD 91
Query: 149 EPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKL 208
+ K + EI +L +L HPN+IKL+ + + + SL L +L I G
Sbjct: 92 K----KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL-VTGGELFDRIVEKGY-Y 145
Query: 209 TEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIADFGLSNFFIPKQ 265
+E ++Q+L + + HE GI+HRD+K NLL LKIADFGLS I +
Sbjct: 146 SERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK--IVEH 203
Query: 266 KGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIG-RPLMPGRTEVEQLHR 324
+ + + T Y APE+L G YG +D+WS G + + G P R + R
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR 262
Query: 325 IFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTA 384
I +W ++ L ++ ++ L+ LDP R T
Sbjct: 263 ILNCEYYFISPWWDEVSL----------------------NAKDLVRKLIVLDPKKRLTT 300
Query: 385 ASALQN 390
ALQ+
Sbjct: 301 FQALQH 306
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 8/211 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSE-PESVKFMAREIRILQKLDHPN 170
Y + K+G G S VY A D VA+K + E E++K RE+ +L H N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ + + Y YLV ++++ L++ I G + + + Q+L G++H H+
Sbjct: 73 IVSMIDVDEEDDCY--YLVMEYIEGPTLSEYIESHGPLSVDTAIN-FTNQILDGIKHAHD 129
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG-ST 288
I+HRDIK N+LID + LKI DFG++ + T+ Y +PE G +T
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMPGRTEV 319
D D++S G +L EM +G P G T V
Sbjct: 190 DECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 10/221 (4%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKLDHP 169
++ L +G+G++ V A + T ++ A+K ++ D + + V+ E R+L LD P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
+ + + + LY V +++ DL I + G K EPQ Y ++ GL H
Sbjct: 80 PFLT-QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISIGLFFLH 137
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPELLLG 286
+RGI++RD+K N+++D G +KIADFG+ +T+R T Y APE ++
Sbjct: 138 KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAPE-IIA 193
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
YG +D W+ G LL EM G+P G E E I +
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 112/225 (49%), Gaps = 13/225 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARD---RDTGKIVALKKVR--FDTSEPESVKFMAREIRILQ 164
+ ++ L +G+G Y V++ R +TGKI A+K ++ + E IL+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSG 223
++ HP ++ L + + LYL+ +++ +L + R G E Y+ ++
Sbjct: 77 EVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMA 133
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPE 282
L H H++GI++RD+K N++++ G +K+ DFGL I G +T T+ Y APE
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI--HDGTVTHXFCGTIEYMAPE 191
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
+L+ S + +D WS G L+ +M G P G + + +I K
Sbjct: 192 ILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 112/225 (49%), Gaps = 13/225 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARD---RDTGKIVALKKVR--FDTSEPESVKFMAREIRILQ 164
+ ++ L +G+G Y V++ R +TGKI A+K ++ + E IL+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSG 223
++ HP ++ L + + LYL+ +++ +L + R G E Y+ ++
Sbjct: 77 EVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMA 133
Query: 224 LQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPE 282
L H H++GI++RD+K N++++ G +K+ DFGL I G +T T+ Y APE
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI--HDGTVTHTFCGTIEYMAPE 191
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
+L+ S + +D WS G L+ +M G P G + + +I K
Sbjct: 192 ILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
L ++G+G + +V Y +TG++VA+KK++ T E ++ REI IL+ L H N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDN 73
Query: 171 VIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K +G+ S + +L L+ +++ L + + +++ ++ Y Q+ G+++
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELL 284
+ +HR++ N+L++ +KI DFGL+ K K P S + WY APE L
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI--FWY-APESL 190
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
S + V D+WS G +L E+F
Sbjct: 191 TESK-FSVASDVWSFGVVLYELF 212
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRF-DTSEPESVKFMAREIRILQKLDH 168
D YD ++G G + V++ +R TG A K V S+ E+V+ +EI+ + L H
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRH 107
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
P ++ L + + ++++FM +L + + K++E + YM+Q+ GL H
Sbjct: 108 PTLVNLHDAFEDDNE--MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 228 HERGILHRDIKASNLLI--DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
HE +H D+K N++ +S LK+ DFGL+ PKQ +T+ T + APE+
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAEFAAPEVAE 223
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSED 335
G G D+WS G L + G G + E L R K C +D
Sbjct: 224 GKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVKSCDWNMDD 271
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 139/282 (49%), Gaps = 33/282 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
+ KL ++G+G++ V+K D T ++VA+K + + +E E + +EI +L + D V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSSYV 83
Query: 172 IKLEGLATSRMQYS-LYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHER 230
K G S ++ S L+++ +++ + R G E Q+ ++++L GL + H
Sbjct: 84 TKYYG---SYLKGSKLWIIMEYLGGGSALDLLRAG-PFDEFQIATMLKEILKGLDYLHSE 139
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+HRDIKA+N+L+ + G +K+ADFG++ Q + V T ++ APE++ S Y
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIQQSA-Y 197
Query: 291 GVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQH 350
D+WS G E+ G P +++ + +F + P++
Sbjct: 198 DSKADIWSLGITAIELAKGE---PPNSDMHPMRVLFLI-------------------PKN 235
Query: 351 YKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEF 392
P+ + G+F S + L DP++R TA L+++F
Sbjct: 236 NPPT---LVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 33/253 (13%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
+ A ++++A +GQG + V KAR+ + A+KK+R E + + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASL 59
Query: 167 DHPNVIKLEGLATSRMQY-----------SLYLVFDFMQS-DLTKIICRPGQKLTEPQVK 214
+H V++ R + +L++ ++ ++ L +I +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 215 CYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF------------- 261
+Q+L L + H +GI+HRD+K N+ ID+S +KI DFGL+
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 262 IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQ 321
+P LTS + T Y A E+L G+ Y ID++S G + EM + P T +E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 322 LHRIFKLCGTPSE 334
++ + KL E
Sbjct: 235 VNILKKLRSVSIE 247
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 33/253 (13%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
+ A ++++A +GQG + V KAR+ + A+KK+R E + + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASL 59
Query: 167 DHPNVIKLEGLATSRMQY-----------SLYLVFDFMQS-DLTKIICRPGQKLTEPQVK 214
+H V++ R + +L++ ++ ++ L +I +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 215 CYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF------------- 261
+Q+L L + H +GI+HRD+K N+ ID+S +KI DFGL+
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 262 IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQ 321
+P LTS + T Y A E+L G+ Y ID++S G + EM + P T +E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 322 LHRIFKLCGTPSE 334
++ + KL E
Sbjct: 235 VNILKKLRSVSIE 247
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRF-DTSEPESVKFMAREIRILQKLDH 168
D YD ++G G + V++ +R TG A K V S+ E+V+ +EI+ + L H
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRH 213
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
P ++ L + + ++++FM +L + + K++E + YM+Q+ GL H
Sbjct: 214 PTLVNLHDAFEDDNE--MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 228 HERGILHRDIKASNLLI--DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
HE +H D+K N++ +S LK+ DFGL+ PKQ +T+ T + APE+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAEFAAPEVAE 329
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSED 335
G G D+WS G L + G G + E L R K C +D
Sbjct: 330 GKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVKSCDWNMDD 377
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG- 176
+G G + V+KA+ R GK +++V+++ + E RE++ L KLDH N++ G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE------REVKALAKLDHVNIVHYNGC 73
Query: 177 ---------LATSRMQYSLYLVFDFMQSDLTKIIC-------------------RPGQKL 208
+ ++ S Y + S +K C R G+KL
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 209 TEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGP 268
+ +Q+ G+ + H + ++HRD+K SN+ + + +KI DFGL K G
Sbjct: 134 DKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL--KNDGK 191
Query: 269 LTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
T TL Y +PE + S DYG +DL++ G +LAE+
Sbjct: 192 RTRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 11/219 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D +++++++G G V K + R +G I+A K + + +P + RE+++L + + P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 74
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + +++ E + +L GL + E
Sbjct: 75 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 230 RG-ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y APE L G T
Sbjct: 133 KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMAPERLQG-T 188
Query: 289 DYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
Y V D+WS G L E+ +GR P+ P + ++L IF
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYPIPP--PDAKELEAIF 225
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQ-KLD 167
D+++ + +G+G++ V AR ++TG + A+K ++ D + + V+ E RIL +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
HP + +L + L+ V +F+ + ++ E + + Y +++S L
Sbjct: 83 HPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFL 140
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLG 286
H++GI++RD+K N+L+D G K+ADFG+ I G T+ T Y APE +L
Sbjct: 141 HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI--CNGVTTATFCGTPDYIAPE-ILQ 197
Query: 287 STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
YG +D W+ G LL EM G E + I
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
+G G + V+KA+ R GK +K+V+++ + E RE++ L KLDH N++ G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDHVNIVHYNGC 72
Query: 178 --------ATSRMQYS------LYLVFDFMQSDLTK--IICRPGQKLTEPQVKCYMQQLL 221
TS S L++ +F + I R G+KL + +Q+
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
G+ + H + +++RD+K SN+ + + +KI DFGL K G TL Y +P
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL--KNDGKRXRSKGTLRYMSP 190
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMF 307
E + S DYG +DL++ G +LAE+
Sbjct: 191 E-QISSQDYGKEVDLYALGLILAELL 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 43/305 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D Y+ +G G + V A + VA+K++ + + S+ + +EI+ + + HP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHP 73
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQS----DLTKIICRPGQK----LTEPQVKCYMQQLL 221
N++ + ++ L+LV + D+ K I G+ L E + ++++L
Sbjct: 74 NIVSY--YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV------T 275
GL++ H+ G +HRD+KA N+L+ + G ++IADFG+S F G +T V T
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL--ATGGDITRNKVRKTFVGT 189
Query: 276 LWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSED 335
+ APE++ Y D+WS G E+ G P
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--------------------AAPYHK 229
Query: 336 Y--WKKMKLTTTFRPQHYKPSF--REVFGEFPPSSYGILTTLLALDPAYRGTAASALQNE 391
Y K + LT P + +E+ ++ S +++ L DP R TAA L+++
Sbjct: 230 YPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 289
Query: 392 FFNAS 396
FF +
Sbjct: 290 FFQKA 294
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 43/305 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D Y+ +G G + V A + VA+K++ + + S+ + +EI+ + + HP
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHP 68
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQS----DLTKIICRPGQK----LTEPQVKCYMQQLL 221
N++ + ++ L+LV + D+ K I G+ L E + ++++L
Sbjct: 69 NIVSY--YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV------T 275
GL++ H+ G +HRD+KA N+L+ + G ++IADFG+S F G +T V T
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL--ATGGDITRNKVRKTFVGT 184
Query: 276 LWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSED 335
+ APE++ Y D+WS G E+ G P
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--------------------AAPYHK 224
Query: 336 Y--WKKMKLTTTFRPQHYKPSF--REVFGEFPPSSYGILTTLLALDPAYRGTAASALQNE 391
Y K + LT P + +E+ ++ S +++ L DP R TAA L+++
Sbjct: 225 YPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 284
Query: 392 FFNAS 396
FF +
Sbjct: 285 FFQKA 289
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 53/263 (20%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALK---KVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+GQG+Y V A + T I A+K K + P+ V+ + E+R+++KL HPN+ +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 175 EGLATSRMQYSLYLVFDFMQS--------------------DLTKIICRPGQKLTEPQVK 214
+ QY + LV + D+ K P + E +
Sbjct: 94 YEVYEDE-QY-ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 215 --------------------CYMQQLLSGLQHCHERGILHRDIKASNLLI--DKSGMLKI 252
M+Q+ S L + H +GI HRDIK N L +KS +K+
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKL 211
Query: 253 ADFGLSNFFIPKQKGP---LTSRVVTLWYRAPELLLGSTD-YGVGIDLWSAGCLLAEMFI 308
DFGLS F G +T++ T ++ APE+L + + YG D WSAG LL + +
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271
Query: 309 GRPLMPGRTEVEQLHRIF--KLC 329
G PG + + + ++ KLC
Sbjct: 272 GAVPFPGVNDADTISQVLNKKLC 294
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
+G+G++ V A + T A KK+ E V +EI I++ LDHPN+I+L
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRL--Y 72
Query: 178 ATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T +YLV + +++ + + E M+ +LS + +CH+ + HR
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHR 130
Query: 236 DIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
D+K N L LK+ DFGL+ F P + + ++V T +Y +P++L G YG
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPYYVSPQVLEGL--YGP 186
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYK 352
D WSAG ++ + G P T+ E + +I + T E W +
Sbjct: 187 ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS----------- 235
Query: 353 PSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
P + ++ LL P R T+ AL++E+F
Sbjct: 236 -----------PQAESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
+G+G++ V A + T A KK+ E V +EI I++ LDHPN+I+L
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRL--Y 89
Query: 178 ATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
T +YLV + +++ + + E M+ +LS + +CH+ + HR
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHR 147
Query: 236 DIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
D+K N L LK+ DFGL+ F P + + ++V T +Y +P++L G YG
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPYYVSPQVLEGL--YGP 203
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYK 352
D WSAG ++ + G P T+ E + +I + T E W +
Sbjct: 204 ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS----------- 252
Query: 353 PSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
P + ++ LL P R T+ AL++E+F
Sbjct: 253 -----------PQAESLIRRLLTKSPKQRITSLQALEHEWF 282
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 77
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 78 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKS 194
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 253
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 254 PSD-RPSFAEIHQAF 267
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 126
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 127 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y +PE L G T
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG-T 240
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMP 314
Y V D+WS G L EM +GR +P
Sbjct: 241 HYSVQSDIWSMGLSLVEMAVGRYPIP 266
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 20/239 (8%)
Query: 118 VGQGTYSNVYKARDRDT--GKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
+G+G+Y V + D +T + V + K + P + +EI++L++L H NVI+L
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 176 GLATSRMQYSLYLVFDFMQSDLTKII-CRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ + + +Y+V ++ + +++ P ++ Q Y QL+ GL++ H +GI+H
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIP-KQKGPLTSRVVTLWYRAPELLLG-STDYGV 292
+DIK NLL+ G LKI+ G++ P + + ++ PE+ G T G
Sbjct: 133 KDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGF 192
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKL-----------CGTPSEDYWKKM 340
+D+WSAG L + G L P E + ++++F+ CG P D K M
Sbjct: 193 KVDIWSAGVTLYNITTG--LYP--FEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGM 247
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 76
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 77 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 252
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 253 PSD-RPSFAEIHQAF 266
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 81
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 82 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 198
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 257
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 258 PSD-RPSFAEIHQAF 271
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y +PE L G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG-T 178
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMP 314
Y V D+WS G L EM +GR +P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y +PE L G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG-T 178
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMP 314
Y V D+WS G L EM +GR +P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 103 GLVPKSADSYDKLA----------KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPES 152
G + S+ +YDK K+G G Y VY+ + VA+K ++ DT E E
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 153 VKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEP 211
+E +++++ HPN+++L G+ T + Y++ +FM +L + ++
Sbjct: 61 ---FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 212 QVKCYM-QQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT 270
V YM Q+ S +++ ++ +HRD+ A N L+ ++ ++K+ADFGLS
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 175
Query: 271 SRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM-------FIGRPLMPGRTEVEQLH 323
+ + APE L + + D+W+ G LL E+ + G L +E+ +
Sbjct: 176 GAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + G P + Y + M+ + P +PSF E+ F
Sbjct: 235 RMERPEGCPEKVY-ELMRACWQWNPSD-RPSFAEIHQAF 271
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 74
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 75 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKS 191
Query: 295 DLWSAGCLLAEMFI-GRPLMPG------RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ G PG +E+ +R+ + G P + Y + M+ +
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 250
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 251 PSD-RPSFAEIHQAF 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 76
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 77 VCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 252
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 253 PSD-RPSFAEIHQAF 266
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y +PE L G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG-T 178
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMP 314
Y V D+WS G L EM +GR +P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 77
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 78 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFI-PKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
RD+ A N L+ ++ ++K+ADFGLS P ++ W APE L + +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPE-SLAYNKFSIK 193
Query: 294 IDLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQW 252
Query: 347 RPQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 253 NPSD-RPSFAEIHQAF 267
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 135/312 (43%), Gaps = 39/312 (12%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
+ D Y ++G+G +S V + + + A K + + + RE RI + L
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGL 224
HPN+++L + + YLVFD + I+ R + +E + Q+L +
Sbjct: 88 KHPNIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAR--EYYSEADASHCIHQILESV 143
Query: 225 QHCHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
H H+ I+HRD+K NLL+ K +K+ADFGL+ + ++ T Y +P
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSP 202
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
E+L YG +D+W+ G +L + +G P E H++++ + D+
Sbjct: 203 EVLRKDP-YGKPVDIWACGVILYILLVGYPPFWD----EDQHKLYQQIKAGAYDFPSPEW 257
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACD 401
T T P + ++ +L ++PA R TA AL++ P C
Sbjct: 258 DTVT------------------PEAKNLINQMLTINPAKRITADQALKH------PWVCQ 293
Query: 402 LSSLPVICREED 413
S++ + ++
Sbjct: 294 RSTVASMMHRQE 305
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 103 GLVPKSADSYDKLA----------KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPES 152
G + S+ +YDK K+G G Y VY+ + VA+K ++ DT E E
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 153 VKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEP 211
+E +++++ HPN+++L G+ T + Y++ +FM +L + ++
Sbjct: 61 ---FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 212 QVKCYM-QQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT 270
V YM Q+ S +++ ++ +HRD+ A N L+ ++ ++K+ADFGLS
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 271 SRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM-------FIGRPLMPGRTEVEQLH 323
+ + APE L + + D+W+ G LL E+ + G L +E+ +
Sbjct: 176 GAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + G P + Y + M+ + P +PSF E+ F
Sbjct: 235 RMERPEGCPEKVY-ELMRACWQWNPSD-RPSFAEIHQAF 271
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
A+ YD + +G+G + V R + + K+ A+K + +F+ + F E I+ +
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
P V++L + LY+V ++M DL ++ + E K Y +++ L
Sbjct: 134 SPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDA 189
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL- 285
H G++HRD+K N+L+DK G LK+ADFG + V T Y +PE+L
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 286 --GSTDYGVGIDLWSAGCLLAEMFIG 309
G YG D WS G L EM +G
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G+G + V+ R R +VA+K R +T P+ +E RIL++ HPN+++L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQL---LSGLQHCHERGI 232
+ T + +Y+V + +Q D + G +L +VK +Q + +G+++ +
Sbjct: 180 VCTQKQ--PIYIVMELVQGGDFLTFLRTEGARL---RVKTLLQMVGDAAAGMEYLESKCC 234
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNF---FIPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+HRD+ A N L+ + +LKI+DFG+S + G L R V + + APE L
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL--RQVPVKWTAPE-ALNYGR 291
Query: 290 YGVGIDLWSAGCLLAEMF 307
Y D+WS G LL E F
Sbjct: 292 YSSESDVWSFGILLWETF 309
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKL 166
+ + ++ L +G+GT+ V +++ TG+ A+K ++ + + V E R+LQ
Sbjct: 149 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + + L V ++ + +E + + Y +++S L +
Sbjct: 209 RHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 227 CH-ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H E+ +++RD+K NL++DK G +KI DFGL I K + + T Y APE +L
Sbjct: 267 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKTFCGTPEYLAPE-VL 324
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
A+ Y+ + +G+G + V R + T K+ A+K + +F+ + F E I+ +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
P V++L A +Y LY+V ++M DL ++ + E + Y +++ L
Sbjct: 128 SPWVVQL-FYAFQDDRY-LYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDA 183
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL- 285
H G +HRD+K N+L+DKSG LK+ADFG + + V T Y +PE+L
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 286 --GSTDYGVGIDLWSAGCLLAEMFIG 309
G YG D WS G L EM +G
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
A+ Y+ + +G+G + V R + T K+ A+K + +F+ + F E I+ +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
P V++L + LY+V ++M DL ++ + E + Y +++ L
Sbjct: 133 SPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDA 188
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL- 285
H G +HRD+K N+L+DKSG LK+ADFG + + V T Y +PE+L
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 286 --GSTDYGVGIDLWSAGCLLAEMFIG 309
G YG D WS G L EM +G
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 78
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 79 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFI-PKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
RD+ A N L+ ++ ++K+ADFGLS P ++ W APE L + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPE-SLAYNKFSIK 194
Query: 294 IDLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQW 253
Query: 347 RPQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 254 NPSD-RPSFAEIHQAF 268
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 91
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 92 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y +PE L G T
Sbjct: 150 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG-T 205
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMP 314
Y V D+WS G L EM +GR +P
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPIP 231
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLD 167
A+ Y+ + +G+G + V R + T K+ A+K + +F+ + F E I+ +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
P V++L A +Y LY+V ++M DL ++ + E + Y +++ L
Sbjct: 133 SPWVVQL-FYAFQDDRY-LYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDA 188
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL- 285
H G +HRD+K N+L+DKSG LK+ADFG + + V T Y +PE+L
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 286 --GSTDYGVGIDLWSAGCLLAEMFIG 309
G YG D WS G L EM +G
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKL 166
+ + ++ L +G+GT+ V +++ TG+ A+K ++ + + V E R+LQ
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + + L V ++ + +E + + Y +++S L +
Sbjct: 206 RHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 227 CH-ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H E+ +++RD+K NL++DK G +KI DFGL I K + + T Y APE +L
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKTFCGTPEYLAPE-VL 321
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKV--RFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
K+G+G + VYK +T VA+KK+ D + E + +EI+++ K H N+++L
Sbjct: 38 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQ-LLSGLQHCHERGIL 233
G ++ L V+ S L ++ C G ++C + Q +G+ HE +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGV 292
HRDIK++N+L+D++ KI+DFGL+ + + SR+V T Y APE L G +
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EITP 213
Query: 293 GIDLWSAGCLLAEMFIGRP 311
D++S G +L E+ G P
Sbjct: 214 KSDIYSFGVVLLEIITGLP 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 103 GLVPKSADSYDKLA----------KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPES 152
G + S+ +YDK K+G G Y VY+ + VA+K ++ DT E E
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 153 VKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEP 211
+E +++++ HPN+++L G+ T + Y++ +FM +L + ++
Sbjct: 61 ---FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSA 115
Query: 212 QVKCYM-QQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT 270
V YM Q+ S +++ ++ +HRD+ A N L+ ++ ++K+ADFGLS
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 271 SRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM-------FIGRPLMPGRTEVEQLH 323
+ + APE L + + D+W+ G LL E+ + G L +E+ +
Sbjct: 176 GAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + G P + Y + M+ + P +PSF E+ F
Sbjct: 235 RMERPEGCPEKVY-ELMRACWQWNPSD-RPSFAEIHQAF 271
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G+G + V+ R R +VA+K R +T P+ +E RIL++ HPN+++L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQL---LSGLQHCHERGI 232
+ T + +Y+V + +Q D + G +L +VK +Q + +G+++ +
Sbjct: 180 VCTQKQ--PIYIVMELVQGGDFLTFLRTEGARL---RVKTLLQMVGDAAAGMEYLESKCC 234
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTS----RVVTLWYRAPELLLGST 288
+HRD+ A N L+ + +LKI+DFG+S + G + R V + + APE L
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPE-ALNYG 290
Query: 289 DYGVGIDLWSAGCLLAEMF 307
Y D+WS G LL E F
Sbjct: 291 RYSSESDVWSFGILLWETF 309
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 76
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 77 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 252
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 253 PSD-RPSFAEIHQAF 266
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y +PE L G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG-T 178
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMP 314
Y V D+WS G L EM +GR +P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 64
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 65 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y +PE L G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG-T 178
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMP 314
Y V D+WS G L EM +GR +P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 78
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 79 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 195
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 254
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 255 PSD-RPSFAEIHQAF 268
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 80
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 81 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 197
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 256
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 257 PSD-RPSFAEIHQAF 270
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 78
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 79 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 195
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 254
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 255 PSD-RPSFAEIHQAF 268
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 81
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 82 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 198
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 257
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 258 PSD-RPSFAEIHQAF 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 76
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 77 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 252
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 253 PSD-RPSFAEIHQAF 266
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 76
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 77 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 252
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 253 PSD-RPSFAEIHQAF 266
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 45/300 (15%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV------RFDTSEPESVK-FMAREIRI 162
++Y+ +G+G S V + + T K A+K + F E + ++ +E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 163 LQKLD-HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
L+K+ HPN+I+L+ T +LVFD M+ L+E + + M+ LL
Sbjct: 77 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+ H+ I+HRD+K N+L+D +K+ DFG S P +K L S T Y AP
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAP 192
Query: 282 ELLLGSTD-----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK---LCGTPS 333
E++ S + YG +D+WS G ++ + G P R ++ L I G+P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
D Y + +++ F L + P R TA AL + FF
Sbjct: 253 WD--------------DYSDTVKDLVSRF-----------LVVQPQKRYTAEEALAHPFF 287
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 89
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 90 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 206
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 265
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 266 PSD-RPSFAEIHQAF 279
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 76
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 77 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 193
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 252
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 253 PSD-RPSFAEIHQAF 266
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++ L +G+G++ V + DT K+ A+K + + E V+ + +E++I+Q L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++ L + + + +++V D + + + E VK ++ +L+ L +
Sbjct: 75 PFLVNL--WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLG-- 286
+ I+HRD+K N+L+D+ G + I DF ++ +P++ +T+ T Y APE+
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAA-MLPRETQ-ITTMAGTKPYMAPEMFSSRK 190
Query: 287 STDYGVGIDLWSAGCLLAEMFIGR 310
Y +D WS G E+ GR
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALK---KVRFDTSEPESVKFMAR-EIRILQKLDHPNVIK 173
+G+G + VY R DTGK+ A+K K R + E++ R + ++ D P ++
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 174 LEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ L + D M DL + + G +E ++ Y +++ GL+H H R +
Sbjct: 256 MS--YAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFV 312
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
++RD+K +N+L+D+ G ++I+D GL+ F +K P S V T Y APE+L Y
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHAS-VGTHGYMAPEVLQKGVAYDS 369
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR-PQHY 351
D +S GC+L ++ G H F+ T + +M LT P +
Sbjct: 370 SADWFSLGCMLFKLLRG-------------HSPFRQHKTKDKHEIDRMTLTMAVELPDSF 416
Query: 352 KPSFREVF 359
P R +
Sbjct: 417 SPELRSLL 424
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALK---KVRFDTSEPESVKFMAR-EIRILQKLDHPNVIK 173
+G+G + VY R DTGK+ A+K K R + E++ R + ++ D P ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 174 LEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ L + D M DL + + G +E ++ Y +++ GL+H H R +
Sbjct: 257 MS--YAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFV 313
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
++RD+K +N+L+D+ G ++I+D GL+ F +K P S V T Y APE+L Y
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHAS-VGTHGYMAPEVLQKGVAYDS 370
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR-PQHY 351
D +S GC+L ++ G H F+ T + +M LT P +
Sbjct: 371 SADWFSLGCMLFKLLRG-------------HSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 352 KPSFREVF 359
P R +
Sbjct: 418 SPELRSLL 425
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALK---KVRFDTSEPESVKFMAR-EIRILQKLDHPNVIK 173
+G+G + VY R DTGK+ A+K K R + E++ R + ++ D P ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 174 LEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ L + D M DL + + G +E ++ Y +++ GL+H H R +
Sbjct: 257 MS--YAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFV 313
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
++RD+K +N+L+D+ G ++I+D GL+ F +K P S V T Y APE+L Y
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHAS-VGTHGYMAPEVLQKGVAYDS 370
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR-PQHY 351
D +S GC+L ++ G H F+ T + +M LT P +
Sbjct: 371 SADWFSLGCMLFKLLRG-------------HSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 352 KPSFREVF 359
P R +
Sbjct: 418 SPELRSLL 425
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALK---KVRFDTSEPESVKFMAR-EIRILQKLDHPNVIK 173
+G+G + VY R DTGK+ A+K K R + E++ R + ++ D P ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 174 LEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ L + D M DL + + G +E ++ Y +++ GL+H H R +
Sbjct: 257 MS--YAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFV 313
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
++RD+K +N+L+D+ G ++I+D GL+ F +K P S V T Y APE+L Y
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHAS-VGTHGYMAPEVLQKGVAYDS 370
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR-PQHY 351
D +S GC+L ++ G H F+ T + +M LT P +
Sbjct: 371 SADWFSLGCMLFKLLRG-------------HSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 352 KPSFREVF 359
P R +
Sbjct: 418 SPELRSLL 425
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 109/205 (53%), Gaps = 20/205 (9%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
++++G+G + +V Y +TG +VA+K+++ S P+ + REI+IL+ L
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH--SGPDQQRDFQREIQILKALHSDF 72
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K G++ + SL LV +++ S L + R +L ++ Y Q+ G+++
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLS-------NFFIPKQKGPLTSRVVTLWYRAPE 282
R +HRD+ A N+L++ +KIADFGL+ ++++ ++ G + WY APE
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG----QSPIFWY-APE 187
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMF 307
L + D+WS G +L E+F
Sbjct: 188 -SLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 109/205 (53%), Gaps = 20/205 (9%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
++++G+G + +V Y +TG +VA+K+++ S P+ + REI+IL+ L
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH--SGPDQQRDFQREIQILKALHSDF 73
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K G++ + SL LV +++ S L + R +L ++ Y Q+ G+++
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLS-------NFFIPKQKGPLTSRVVTLWYRAPE 282
R +HRD+ A N+L++ +KIADFGL+ ++++ ++ G + WY APE
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG----QSPIFWY-APE 188
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMF 307
L + D+WS G +L E+F
Sbjct: 189 -SLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKL 166
+ + ++ L +G+GT+ V +++ TG+ A+K ++ + + V E R+LQ
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + + L V ++ + +E + + Y +++S L +
Sbjct: 68 RHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 227 CH-ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H E+ +++RD+K NL++DK G +KI DFGL I K + T Y APE +L
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKXFCGTPEYLAPE-VL 183
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKL 166
+ + ++ L +G+GT+ V +++ TG+ A+K ++ + + V E R+LQ
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + + L V ++ + +E + + Y +++S L +
Sbjct: 67 RHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 227 CH-ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H E+ +++RD+K NL++DK G +KI DFGL I K + T Y APE +L
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKXFCGTPEYLAPE-VL 182
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 109/205 (53%), Gaps = 20/205 (9%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
++++G+G + +V Y +TG +VA+K+++ S P+ + REI+IL+ L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH--SGPDQQRDFQREIQILKALHSDF 85
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K G++ + SL LV +++ S L + R +L ++ Y Q+ G+++
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLS-------NFFIPKQKGPLTSRVVTLWYRAPE 282
R +HRD+ A N+L++ +KIADFGL+ ++++ ++ G + WY APE
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG----QSPIFWY-APE 200
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMF 307
L + D+WS G +L E+F
Sbjct: 201 -SLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKL 166
+ + ++ L +G+GT+ V +++ TG+ A+K ++ + + V E R+LQ
Sbjct: 6 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HP + L+ + + L V ++ + +E + + Y +++S L +
Sbjct: 66 RHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 227 CH-ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL 285
H E+ +++RD+K NL++DK G +KI DFGL I K + T Y APE +L
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKXFCGTPEYLAPE-VL 181
Query: 286 GSTDYGVGIDLWSAGCLLAEMFIGR 310
DYG +D W G ++ EM GR
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +F+ +E +++++ HPN+++L G
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--EFL-KEAAVMKEIKHPNLVQLLG 283
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 284 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
R++ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 400
Query: 295 DLWSAGCLLAEMFI-GRPLMPG--RTEVEQL----HRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ G PG ++V +L +R+ + G P E ++ M+ +
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP-EKVYELMRACWQWN 459
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 460 PSD-RPSFAEIHQAF 473
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 67
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 68 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I + V T Y +PE L G T
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF---VGTRSYMSPERLQG-T 181
Query: 289 DYGVGIDLWSAGCLLAEMFIGR 310
Y V D+WS G L EM +GR
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 74
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 75 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE-SLAYNKFSIKS 191
Query: 295 DLWSAGCLLAEMFI-GRPLMPG------RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ G PG +E+ +R+ + G P + Y + M+ +
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 250
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 251 PSD-RPSFAEIHQAF 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +F+ +E +++++ HPN+++L G
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--EFL-KEAAVMKEIKHPNLVQLLG 280
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 281 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
R++ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 397
Query: 295 DLWSAGCLLAEMFI-GRPLMPG--RTEVEQL----HRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ G PG ++V +L +R+ + G P + Y + M+ +
Sbjct: 398 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 456
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 457 PSD-RPSFAEIHQAF 470
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
D ++K++++G G V+K + +G ++A K + + +P + RE+++L + + P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSP 83
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++ G S + S+ + + M + + ++ E + ++ GL + E
Sbjct: 84 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+ I+HRD+K SN+L++ G +K+ DFG+S I S V T Y +PE L G T
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQG-T 197
Query: 289 DYGVGIDLWSAGCLLAEMFIGR 310
Y V D+WS G L EM +GR
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 30/244 (12%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL 166
+ A ++++A +GQG + V KAR+ + A+KK+R E + + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVXLLASL 59
Query: 167 DHPNVIKLEGLATSRMQY-----------SLYLVFDFMQS-DLTKIICRPGQKLTEPQVK 214
+H V++ R + +L++ ++ ++ L +I +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 215 CYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF------------- 261
+Q+L L + H +GI+HR++K N+ ID+S +KI DFGL+
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 262 IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQ 321
+P LTS + T Y A E+L G+ Y ID +S G + E P G V
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNI 237
Query: 322 LHRI 325
L ++
Sbjct: 238 LKKL 241
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY+ + VA+K ++ DT E E +F+ +E +++++ HPN+++L G
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--EFL-KEAAVMKEIKHPNLVQLLG 322
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 323 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
R++ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKS 439
Query: 295 DLWSAGCLLAEMFI-GRPLMPG--RTEVEQL----HRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ G PG ++V +L +R+ + G P E ++ M+ +
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP-EKVYELMRACWQWN 498
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 499 PSD-RPSFAEIHQAF 512
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 17/227 (7%)
Query: 97 PKEVLAGLVPKSADSYDKLAKV-GQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPES 152
P E + + SY K+ +V G G + V + R + GK VA+K ++ +E +
Sbjct: 2 PNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR 61
Query: 153 VKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQ-KLTEP 211
+F++ E I+ + +HPN+I+LEG+ T+ M + ++ +FM++ R + T
Sbjct: 62 REFLS-EASIMGQFEHPNIIRLEGVVTNSM--PVMILTEFMENGALDSFLRLNDGQFTVI 118
Query: 212 QVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQK 266
Q+ ++ + SG+++ E +HRD+ A N+L++ + + K++DFGLS F P +
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 267 GPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM--FIGRP 311
L ++ W APE + + D WS G ++ E+ F RP
Sbjct: 179 SSLGGKIPIRW-TAPE-AIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKV--RFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
K+G+G + VYK +T VA+KK+ D + E + +EI+++ K H N+++L
Sbjct: 38 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQ-LLSGLQHCHERGIL 233
G ++ L V+ S L ++ C G ++C + Q +G+ HE +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGV 292
HRDIK++N+L+D++ KI+DFGL+ + + R+V T Y APE L G +
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EITP 213
Query: 293 GIDLWSAGCLLAEMFIGRP 311
D++S G +L E+ G P
Sbjct: 214 KSDIYSFGVVLLEIITGLP 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G + VY+ + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 74
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T + Y++ +FM +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 75 VCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L + +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKS 191
Query: 295 DLWSAGCLLAEMFI-GRPLMPG------RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ G PG +E+ +R+ + G P + Y + M+ +
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY-ELMRACWQWN 250
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E+ F
Sbjct: 251 PSD-RPSFAEIHQAF 264
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKV--RFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
K+G+G + VYK +T VA+KK+ D + E + +EI+++ K H N+++L
Sbjct: 32 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQ-LLSGLQHCHERGIL 233
G ++ L V+ S L ++ C G ++C + Q +G+ HE +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGV 292
HRDIK++N+L+D++ KI+DFGL+ + + R+V T Y APE L G +
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EITP 207
Query: 293 GIDLWSAGCLLAEMFIGRP 311
D++S G +L E+ G P
Sbjct: 208 KSDIYSFGVVLLEIITGLP 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 130/301 (43%), Gaps = 45/301 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV------RFDTSEPESVK-FMAREIRI 162
++Y+ +G+G S V + + T K A+K + F E + ++ +E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 163 LQKLD-HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
L+K+ HPN+I+L+ T +LVFD M+ L+E + + M+ LL
Sbjct: 77 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+ H+ I+HRD+K N+L+D +K+ DFG S P +K L T Y AP
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAP 192
Query: 282 ELLLGSTD-----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK---LCGTPS 333
E++ S + YG +D+WS G ++ + G P R ++ L I G+P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
D Y + +++ F L + P R TA AL + FF
Sbjct: 253 WD--------------DYSDTVKDLVSRF-----------LVVQPQKRYTAEEALAHPFF 287
Query: 394 N 394
Sbjct: 288 Q 288
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+ + L ++G GT V+K R R TG ++A+K++R ++ E+ + + +L+ D P
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+++ G T +++ + M + K+ R + E + ++ L + E
Sbjct: 85 YIVQCFG--TFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 230 R-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL---- 284
+ G++HRD+K SN+L+D+ G +K+ DFG+S + + ++ Y APE +
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA--YMAPERIDPPD 200
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIFK 327
DY + D+WS G L E+ G+ P +T+ E L ++ +
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 45/300 (15%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV------RFDTSEPESVK-FMAREIRI 162
++Y+ +G+G S V + + T K A+K + F E + ++ +E+ I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 163 LQKLD-HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
L+K+ HPN+I+L+ T +LVFD M+ L+E + + M+ LL
Sbjct: 64 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+ H+ I+HRD+K N+L+D +K+ DFG S P +K L T Y AP
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAP 179
Query: 282 ELLLGSTD-----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK---LCGTPS 333
E++ S + YG +D+WS G ++ + G P R ++ L I G+P
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 239
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
D Y + +++ F L + P R TA AL + FF
Sbjct: 240 WD--------------DYSDTVKDLVSRF-----------LVVQPQKRYTAEEALAHPFF 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 20/265 (7%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+ ++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRL 81
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER
Sbjct: 82 YAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
+HRD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 197
Query: 293 GIDLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTF 346
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 257
Query: 347 RPQHYKPSF---REVFGEFPPSSYG 368
RP+ +P+F R V +F ++ G
Sbjct: 258 RPED-RPTFDYLRSVLEDFFTATEG 281
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 20/265 (7%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+ ++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRL 73
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER
Sbjct: 74 YAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
+HRD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 189
Query: 293 GIDLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTF 346
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 249
Query: 347 RPQHYKPSF---REVFGEFPPSSYG 368
RP+ +P+F R V +F ++ G
Sbjct: 250 RPED-RPTFDYLRSVLEDFFTATEG 273
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 13/225 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
+G G +S V A ++ TGK+ A+K + + + + EI +L+K+ H N++ LE +
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS-IENEIAVLRKIKHENIVALEDI 88
Query: 178 ATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
S LYLV + +L I G TE ++Q+L + + H GI+HRD
Sbjct: 89 YESPNH--LYLVMQLVSGGELFDRIVEKGF-YTEKDASTLIRQVLDAVYYLHRMGIVHRD 145
Query: 237 IKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGV 292
+K NLL D+ + I+DFGLS + KG + S T Y APE +L Y
Sbjct: 146 LKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPE-VLAQKPYSK 201
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYW 337
+D WS G + + G P + + +I K YW
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYW 246
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 8/206 (3%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVR--FDTSEPESVKFMAREIRILQKLDHPNVIKL 174
K G+G + VYK +T VA+KK+ D + E + +EI++ K H N+++L
Sbjct: 29 KXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQ-LLSGLQHCHERGIL 233
G ++ L V+ S L ++ C G +C + Q +G+ HE +
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI 146
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGSTDYGV 292
HRDIK++N+L+D++ KI+DFGL+ + SR+V T Y APE L G +
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG--EITP 204
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTE 318
D++S G +L E+ G P + E
Sbjct: 205 KSDIYSFGVVLLEIITGLPAVDEHRE 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 20/265 (7%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+ ++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRL 82
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER
Sbjct: 83 YAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 139
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
+HRD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 198
Query: 293 GIDLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTF 346
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 258
Query: 347 RPQHYKPSF---REVFGEFPPSSYG 368
RP+ +P+F R V +F ++ G
Sbjct: 259 RPED-RPTFDYLRSVLEDFFTATEG 282
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 20/265 (7%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+ ++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRL 79
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER
Sbjct: 80 YAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
+HRD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 195
Query: 293 GIDLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTF 346
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 255
Query: 347 RPQHYKPSF---REVFGEFPPSSYG 368
RP+ +P+F R V +F ++ G
Sbjct: 256 RPED-RPTFDYLRSVLEDFFTATEG 279
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-DH 168
S+ +L+++G G+Y V+K R ++ G++ A+K+ P+ E+ +K+ H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
P ++LE LYL + L + G L E QV Y++ L L H H
Sbjct: 117 PCCVRLE--QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
+G++H D+K +N+ + G K+ DFGL G + Y APELL GS
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR--YMAPELLQGS- 231
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIF 326
YG D++S G + E+ L G +QL + +
Sbjct: 232 -YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY 268
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 12/225 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
AD + + ++G+G Y V K R +G+I+A+K++R + E + + ++ +D
Sbjct: 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSGLQ 225
P + G A R + +++ + M + L K + GQ + E + ++ L+
Sbjct: 110 PFTVTFYG-ALFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167
Query: 226 HCHER-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
H H + ++HRD+K SN+LI+ G +K+ DFG+S + + + + Y APE +
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP--YMAPERI 225
Query: 285 ---LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRI 325
L Y V D+WS G + E+ I R P T +QL ++
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 22/258 (8%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRLYA 75
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER +H
Sbjct: 76 VVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKS 191
Query: 295 DLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLC---GTPSEDYWKKMKLTTTFR 347
D+WS G LL E+ GR PG T ++ L R +++ P E Y + M+L R
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-QLMRLCWKER 250
Query: 348 PQHYKPSF---REVFGEF 362
P+ +P+F R V +F
Sbjct: 251 PED-RPTFDYLRSVLEDF 267
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 30/279 (10%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P + +++ + +G+G + V + R TGK+ A KK+ + + MA E +IL+
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQK-LTEPQVKCYMQQLLS 222
K++ V+ L + +L LV M DL I GQ E + Y ++
Sbjct: 240 KVNSRFVVSLA--YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
GL+ H I++RD+K N+L+D G ++I+D GL+ +P+ + + RV T+ Y APE
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQT-IKGRVGTVGYMAPE 355
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
++ + Y D W+ GCLL EM G+ R + + + +L E+Y ++
Sbjct: 356 -VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--- 411
Query: 343 TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYR 381
F P + + + LL DPA R
Sbjct: 412 -------------------FSPQARSLCSQLLCKDPAER 431
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 30/279 (10%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMA-REIRILQ 164
P + +++ + +G+G + V + R TGK+ A KK+ + + MA E +IL+
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQK-LTEPQVKCYMQQLLS 222
K++ V+ L + +L LV M DL I GQ E + Y ++
Sbjct: 240 KVNSRFVVSLA--YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPE 282
GL+ H I++RD+K N+L+D G ++I+D GL+ +P+ + + RV T+ Y APE
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQT-IKGRVGTVGYMAPE 355
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKL 342
++ + Y D W+ GCLL EM G+ R + + + +L E+Y ++
Sbjct: 356 -VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--- 411
Query: 343 TTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYR 381
F P + + + LL DPA R
Sbjct: 412 -------------------FSPQARSLCSQLLCKDPAER 431
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQK 165
P Y + K+G G +S V+ A+D VA+K VR D E+ + EI++LQ+
Sbjct: 15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE---DEIKLLQR 71
Query: 166 LDHPNVIKLEGLATSRM-------------QYSLYLVFDFMQSDLTKIICRPGQK-LTEP 211
++ + K + + + + + +VF+ + +L +I + + +
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 212 QVKCYMQQLLSGLQHCHER-GILHRDIKASNLLIDKSG------MLKIADFGLSNFFIPK 264
VK +QLL GL + H R GI+H DIK N+L++ +KIAD G + ++
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--- 188
Query: 265 QKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLM---PGRT---E 318
T+ + T YR+PE+LLG+ +G G D+WS CL+ E+ G L G + +
Sbjct: 189 -DEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246
Query: 319 VEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
+ + +I +L G + K T TF
Sbjct: 247 DDHIAQIIELLGELPSYLLRNGKYTRTF 274
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 22/258 (8%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 22 RLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRLYA 77
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER +H
Sbjct: 78 VVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 134
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKS 193
Query: 295 DLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLC---GTPSEDYWKKMKLTTTFR 347
D+WS G LL E+ GR PG T ++ L R +++ P E Y + M+L R
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-QLMRLCWKER 252
Query: 348 PQHYKPSF---REVFGEF 362
P+ +P+F R V +F
Sbjct: 253 PED-RPTFDYLRSVLEDF 269
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQK 165
P Y + K+G G +S V+ A+D VA+K VR D E+ + EI++LQ+
Sbjct: 15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE---DEIKLLQR 71
Query: 166 LDHPNVIKLEGLATSRM-------------QYSLYLVFDFMQSDLTKIICRPGQK-LTEP 211
++ + K + + + + + +VF+ + +L +I + + +
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 212 QVKCYMQQLLSGLQHCHER-GILHRDIKASNLLIDKSG------MLKIADFGLSNFFIPK 264
VK +QLL GL + H R GI+H DIK N+L++ +KIAD G + ++
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--- 188
Query: 265 QKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLM---PGRT---E 318
T+ + T YR+PE+LLG+ +G G D+WS CL+ E+ G L G + +
Sbjct: 189 -DEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246
Query: 319 VEQLHRIFKLCGTPSEDYWKKMKLTTTF 346
+ + +I +L G + K T TF
Sbjct: 247 DDHIAQIIELLGELPSYLLRNGKYTRTF 274
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 22/258 (8%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 21 RLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRLYA 76
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER +H
Sbjct: 77 VVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 133
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKS 192
Query: 295 DLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLC---GTPSEDYWKKMKLTTTFR 347
D+WS G LL E+ GR PG T ++ L R +++ P E Y + M+L R
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-QLMRLCWKER 251
Query: 348 PQHYKPSF---REVFGEF 362
P+ +P+F R V +F
Sbjct: 252 PED-RPTFDYLRSVLEDF 268
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 20/265 (7%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+ ++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRL 83
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER
Sbjct: 84 YAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
+HRD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 199
Query: 293 GIDLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTF 346
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 259
Query: 347 RPQHYKPSF---REVFGEFPPSSYG 368
RP+ +P+F R V +F ++ G
Sbjct: 260 RPED-RPTFDYLRSVLEDFFTATEG 283
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 12/225 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
AD + + ++G+G Y V K R +G+I+A+K++R + E + + ++ +D
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSGLQ 225
P + G A R + +++ + M + L K + GQ + E + ++ L+
Sbjct: 66 PFTVTFYG-ALFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123
Query: 226 HCHER-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
H H + ++HRD+K SN+LI+ G +K+ DFG+S + + + + Y APE +
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP--YMAPERI 181
Query: 285 ---LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRI 325
L Y V D+WS G + E+ I R P T +QL ++
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 22/258 (8%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRLYA 75
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER +H
Sbjct: 76 VVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKS 191
Query: 295 DLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLC---GTPSEDYWKKMKLTTTFR 347
D+WS G LL E+ GR PG T ++ L R +++ P E Y + M+L R
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-QLMRLCWKER 250
Query: 348 PQHYKPSF---REVFGEF 362
P+ +P+F R V +F
Sbjct: 251 PED-RPTFDYLRSVLEDF 267
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 15/212 (7%)
Query: 111 SYDKLAKV-GQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL 166
SY K+ +V G G + V + R + GK VA+K ++ +E + +F++ E I+ +
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS-EASIMGQF 72
Query: 167 DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQ-KLTEPQVKCYMQQLLSGLQ 225
+HPN+I+LEG+ T+ M + ++ +FM++ R + T Q+ ++ + SG++
Sbjct: 73 EHPNIIRLEGVVTNSM--PVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMR 130
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGP-LTSRV---VTLWYRAP 281
+ E +HRD+ A N+L++ + + K++DFGLS F P TS + + + + AP
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEM--FIGRP 311
E + + D WS G ++ E+ F RP
Sbjct: 191 E-AIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 36/292 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRF-DTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G G + V+K + TG +A K ++ + E VK EI ++ +LDH N+I+L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK---NEISVMNQLDHANLIQLYD 153
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
S+ + LV +++ +L I LTE +M+Q+ G++H H+ ILH
Sbjct: 154 AFESK--NDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 236 DIKASNLL-IDKSG-MLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY-GV 292
D+K N+L +++ +KI DFGL+ + P++K L T + APE++ + D+
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVV--NYDFVSF 267
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYK 352
D+WS G + + G G + E L+ I C ED
Sbjct: 268 PTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA-CRWDLED----------------- 309
Query: 353 PSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSS 404
E F + + ++ LL + ++R +A+ AL++ + + L LS+
Sbjct: 310 ----EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSA 357
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 130/257 (50%), Gaps = 20/257 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 15 RLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRLYA 70
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER +H
Sbjct: 71 VVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 127
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKS 186
Query: 295 DLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTFRP 348
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L RP
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 246
Query: 349 QHYKPSF---REVFGEF 362
+ +P+F R V +F
Sbjct: 247 ED-RPTFDYLRSVLEDF 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 20/259 (7%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+ ++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRL 78
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER
Sbjct: 79 YAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
+HRD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 194
Query: 293 GIDLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTF 346
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 254
Query: 347 RPQHYKPSF---REVFGEF 362
RP+ +P+F R V +F
Sbjct: 255 RPED-RPTFDYLRSVLEDF 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 20/259 (7%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+ ++G G + V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRL 79
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGI 232
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER
Sbjct: 80 YAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
+HRD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 195
Query: 293 GIDLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTF 346
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 255
Query: 347 RPQHYKPSF---REVFGEF 362
RP+ +P+F R V +F
Sbjct: 256 RPED-RPTFDYLRSVLEDF 273
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 124/255 (48%), Gaps = 17/255 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G Y VY + VA+K ++ DT E E +E +++++ HPN+++L G
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLVQLLG 95
Query: 177 LATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILH 234
+ T ++ Y+V ++M +L + ++ V YM Q+ S +++ ++ +H
Sbjct: 96 VCT--LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A N L+ ++ ++K+ADFGLS + + APE L +T + +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT-FSIKS 212
Query: 295 DLWSAGCLLAEM-------FIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFR 347
D+W+ G LL E+ + G L +E+ +R+ + G P + Y + M+ +
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVY-ELMRACWKWS 271
Query: 348 PQHYKPSFREVFGEF 362
P +PSF E F
Sbjct: 272 PAD-RPSFAETHQAF 285
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 115 LAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
++++G+G + +V Y +TG +VA+K+++ S P+ + REI+IL+ L
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH--SGPDQQRDFQREIQILKALHSDF 69
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
++K G++ + L LV +++ S L + R +L ++ Y Q+ G+++
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR----VVTLWYRAPELLL 285
R +HRD+ A N+L++ +KIADFGL+ +P K R WY APE L
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAK-LLPLDKDXXVVREPGQSPIFWY-APE-SL 186
Query: 286 GSTDYGVGIDLWSAGCLLAEMF 307
+ D+WS G +L E+F
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELF 208
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
Query: 114 KLAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPES----VKFMAREIRILQK 165
++ +G+G + V Y +TG+ VA+K ++ PES + + +EI IL+
Sbjct: 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-----PESGGNHIADLKKEIEILRN 79
Query: 166 LDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGL 224
L H N++K +G+ T + L+ +F+ S L + + + K+ Q Y Q+ G+
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGM 139
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT---SRVVTLWYRAP 281
+ R +HRD+ A N+L++ +KI DFGL+ I K T R +++ AP
Sbjct: 140 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWYAP 198
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMF 307
E L+ S Y + D+WS G L E+
Sbjct: 199 ECLMQSKFY-IASDVWSFGVTLHELL 223
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 132/263 (50%), Gaps = 20/263 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G V+ K VA+K ++ + P++ F+A E ++++L H +++L
Sbjct: 20 RLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMKQLQHQRLVRLYA 75
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRP-GQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ T Q +Y++ ++M++ L + P G KLT ++ Q+ G+ ER +H
Sbjct: 76 VVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ + KIADFGL+ + + + APE + T + +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT-FTIKS 191
Query: 295 DLWSAGCLLAEMFI-GRPLMPGRTE---VEQLHRIFKLCGTPS--EDYWKKMKLTTTFRP 348
D+WS G LL E+ GR PG T ++ L R +++ + E+ ++ M+L RP
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 349 QHYKPSF---REVFGEFPPSSYG 368
+ +P+F R V +F ++ G
Sbjct: 252 ED-RPTFDYLRSVLEDFFTATEG 273
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 14/222 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 329
Query: 177 LATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +H
Sbjct: 330 VVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 445
Query: 295 DLWSAGCLLAEMFI-GRPLMPG---RTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 487
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
Query: 114 KLAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPES----VKFMAREIRILQK 165
++ +G+G + V Y +TG+ VA+K ++ PES + + +EI IL+
Sbjct: 13 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-----PESGGNHIADLKKEIEILRN 67
Query: 166 LDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGL 224
L H N++K +G+ T + L+ +F+ S L + + + K+ Q Y Q+ G+
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGM 127
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT---SRVVTLWYRAP 281
+ R +HRD+ A N+L++ +KI DFGL+ I K T R +++ AP
Sbjct: 128 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWYAP 186
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMF 307
E L+ S Y + D+WS G L E+
Sbjct: 187 ECLMQSKFY-IASDVWSFGVTLHELL 211
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 23/219 (10%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIK--- 173
++G G + V + +DTG+ VA+K+ R + S P++ + EI+I++KL+HPNV+
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS-PKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 174 ----LEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQ--KLTEPQVKCYMQQLLSGLQH 226
L+ LA + + L ++ + DL K + + L E ++ + + S L++
Sbjct: 80 VPDGLQKLAPNDLPL---LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 227 CHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPE 282
HE I+HRD+K N+++ + + KI D G + +G L + V TL Y APE
Sbjct: 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPE 193
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIG-RPLMPGRTEVE 320
LL Y V +D WS G L E G RP +P V+
Sbjct: 194 -LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 23/219 (10%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIK--- 173
++G G + V + +DTG+ VA+K+ R + S P++ + EI+I++KL+HPNV+
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS-PKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 174 ----LEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQ--KLTEPQVKCYMQQLLSGLQH 226
L+ LA + + L ++ + DL K + + L E ++ + + S L++
Sbjct: 81 VPDGLQKLAPNDLPL---LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 227 CHERGILHRDIKASNLLID---KSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPE 282
HE I+HRD+K N+++ + + KI D G + +G L + V TL Y APE
Sbjct: 138 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPE 194
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIG-RPLMPGRTEVE 320
LL Y V +D WS G L E G RP +P V+
Sbjct: 195 -LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 34/285 (11%)
Query: 89 PKWLVDNIPKEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS 148
P+W +P+E L + ++G G + V+ K VA+K ++ +
Sbjct: 2 PEW---EVPRETL-----------KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSM 46
Query: 149 EPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRP-GQ 206
P++ F+A E ++++L H +++L + T Q +Y++ ++M++ L + P G
Sbjct: 47 SPDA--FLA-EANLMKQLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGI 100
Query: 207 KLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK 266
KLT ++ Q+ G+ ER +HR+++A+N+L+ + KIADFGL+ +
Sbjct: 101 KLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY 160
Query: 267 GPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTE---VEQL 322
+ + APE + T + + D+WS G LL E+ GR PG T ++ L
Sbjct: 161 TAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
Query: 323 HRIFKLCGTPS--EDYWKKMKLTTTFRPQHYKPSF---REVFGEF 362
R +++ + E+ ++ M+L RP+ +P+F R V +F
Sbjct: 220 ERGYRMVRPDNCPEELYQLMRLCWKERPED-RPTFDYLRSVLEDF 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 80 AVVSEE---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 49/301 (16%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEPE-SVKFMAREIRILQK 165
D Y+ ++G G ++ V K R + TGK A +KK R +S S + + RE+ IL++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPN+I L + ++ L L +FDF+ + LTE + +++
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---------ESLTEDEATQFLK 115
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKSG---MLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L G+ + H + I H D+K N +L+DK+ +K+ DFG+++ + +
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFG 173
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSE 334
T + APE ++ G+ D+WS G + + G G T+ E L I + E
Sbjct: 174 TPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 335 DYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFN 394
+Y+ E+ +F + LL DP R T A +L++ +
Sbjct: 233 EYFSNTS---------------ELAKDF-------IRRLLVKDPKRRMTIAQSLEHSWIK 270
Query: 395 A 395
A
Sbjct: 271 A 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 246
Query: 177 LATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +H
Sbjct: 247 VVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 295 DLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKL 328
D+WS G LL E+ GR P M R ++Q+ R +++
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 80 AVVSEE---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 246
Query: 177 LATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +H
Sbjct: 247 VVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 295 DLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKL 328
D+WS G LL E+ GR P M R ++Q+ R +++
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 17 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 72
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 73 AVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 129
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 188
Query: 294 IDLWSAGCLLAEMFI-GRPLMPG---RTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 231
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 109/208 (52%), Gaps = 22/208 (10%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKK-VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+G+G + K R+TG+++ +K+ +RFD E+ + +E+++++ L+HPNV+K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDE---ETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 177 LATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+ + L + ++++ L II + Q + + + SG+ + H I+HR
Sbjct: 75 VLYKDKR--LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR-------------VVTLWYRAPE 282
D+ + N L+ ++ + +ADFGL+ + ++ P R V ++ APE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMFIGR 310
++ G + Y +D++S G +L E+ IGR
Sbjct: 193 MINGRS-YDEKVDVFSFGIVLCEI-IGR 218
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 76
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 77 AVVSEE---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 192
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 235
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 139/310 (44%), Gaps = 61/310 (19%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
++ + +G+G + V++A+++ A+K++R E K M RE++ L KL+HP +
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM-REVKALAKLEHPGI 65
Query: 172 IK-----LEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQ-------- 218
++ LE T ++Q S V+ ++Q L CR +C ++
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQL----CRKENLKDWMNGRCTIEERERSVCL 121
Query: 219 ----QLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK-----GPL 269
Q+ ++ H +G++HRD+K SN+ ++K+ DFGL ++ P+
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 270 ------TSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLH 323
T +V T Y +PE + G++ Y +D++S G +L E+ L P T++E
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQME--- 232
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGT 383
+++ T R + P F + + P Y ++ +L+ P R
Sbjct: 233 ---------------RVRTLTDVRNLKFPPLFTQKY----PCEYVMVQDMLSPSPMERPE 273
Query: 384 AASALQNEFF 393
A + ++N F
Sbjct: 274 AINIIENAVF 283
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G+G++ V++ D+ TG A+KKVR + F A E+ L P ++ L G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-------FRAEELMACAGLTSPRIVPLYG 152
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
++++ + ++ + + L E + Y+ Q L GL++ H R ILH D
Sbjct: 153 AVREGPWVNIFM--ELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 210
Query: 237 IKASNLLIDKSG-MLKIADFGLSNFFIPKQKGP--LTSRVV--TLWYRAPELLLGSTDYG 291
+KA N+L+ G + DFG + P G LT + T + APE++LG +
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-CD 269
Query: 292 VGIDLWSAGCLLAEMFIG 309
+D+WS+ C++ M G
Sbjct: 270 AKVDVWSSCCMMLHMLNG 287
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 76
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 77 AVVSEE---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR-FTIK 192
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 35/297 (11%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKV--RFDTSEPESVKFMAREIRILQKLD-HPNVIKL 174
+G+G++S K + + + A+K + R + + +EI L+ + HPN++KL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN-------TQKEITALKLCEGHPNIVKL 71
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ ++ +LV + + + + +E + M++L+S + H H+ G++H
Sbjct: 72 HEVFHDQLH--TFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 235 RDIKASNLLI-DKSGML--KIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
RD+K NLL D++ L KI DFG + P + PL + TL Y APE LL Y
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKTPCFTLHYAAPE-LLNQNGYD 187
Query: 292 VGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHY 351
DLWS G +L M G+ +P ++ L C + E K K +F + +
Sbjct: 188 ESCDLWSLGVILYTMLSGQ--VPFQSHDRSL-----TCTSAVEIMKKIKKGDFSFEGEAW 240
Query: 352 KPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFFNASPLACDLSSLPVI 408
K +E + ++ LL +DP R + NE+ LSS P++
Sbjct: 241 KNVSQE--------AKDLIQGLLTVDPNKRLKMSGLRYNEWLQD---GSQLSSNPLM 286
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 14/222 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 246
Query: 177 LATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +H
Sbjct: 247 VVSEE---PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 295 DLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 13/213 (6%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFD-------TSEPE 151
E LA + + Y ++ +G G + V+ A D++ K V +K ++ + +P+
Sbjct: 13 EGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPK 72
Query: 152 SVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP 211
K + EI IL +++H N+IK+ + ++ + L + DL I R +L EP
Sbjct: 73 LGK-VTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR-HPRLDEP 130
Query: 212 QVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTS 271
+QL+S + + + I+HRDIK N++I + +K+ DFG + + ++G L
Sbjct: 131 LASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFY 187
Query: 272 RVV-TLWYRAPELLLGSTDYGVGIDLWSAGCLL 303
T+ Y APE+L+G+ G +++WS G L
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G+G++ V++ D+ TG A+KKVR + F A E+ L P ++ L G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-------FRAEELMACAGLTSPRIVPLYG 133
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
++++ + ++ + + L E + Y+ Q L GL++ H R ILH D
Sbjct: 134 AVREGPWVNIFM--ELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 237 IKASNLLIDKSG-MLKIADFGLSNFFIPKQKGP--LTSRVV--TLWYRAPELLLG-STDY 290
+KA N+L+ G + DFG + P G LT + T + APE++LG S D
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD- 250
Query: 291 GVGIDLWSAGCLLAEMFIG 309
+D+WS+ C++ M G
Sbjct: 251 -AKVDVWSSCCMMLHMLNG 268
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 23/234 (9%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
+GQG +NV++ R + TG + A+K V + S V RE +L+KL+H N++KL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 178 ATSRMQYSLYLVFDFMQ-SDLTKIICRPGQK--LTEPQVKCYMQQLLSGLQHCHERGILH 234
L+ +F L ++ P L E + ++ ++ G+ H E GI+H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 235 RDIKASNLLI----DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST-- 288
R+IK N++ D + K+ DFG + ++ S T Y P++ +
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYERAVLR 193
Query: 289 -----DYGVGIDLWSAGCLLAEMFIG----RPLMPGRTEVEQLHRIFKLCGTPS 333
YG +DLWS G G RP R E +++I + G PS
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 13 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 68
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 69 AVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 125
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 184
Query: 294 IDLWSAGCLLAEMFI-GRPLMPG---RTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 185 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 227
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 163 LSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 15 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 70
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 71 AVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 127
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 186
Query: 294 IDLWSAGCLLAEMFI-GRPLMPG---RTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR PG R ++Q+ R +++ P
Sbjct: 187 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 229
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 80 AVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 176 GLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M L + G+ L PQ+ Q+ SG+ + +
Sbjct: 80 AVVSEE---PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAR-EIRILQKLD----HP 169
L K G GT ++ DR I + + R P S E+ +L K+ HP
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
VI+L ++ + L L DL I G L E +C+ Q+++ +QHCH
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHS 157
Query: 230 RGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
RG++HRDIK N+LID + G K+ DFG P T T Y PE +
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWISRHQ 214
Query: 289 DYGVGIDLWSAGCLLAEMFIG 309
+ + +WS G LL +M G
Sbjct: 215 YHALPATVWSLGILLYDMVCG 235
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEPE-SVKFMAREIRILQK 165
D Y+ ++G G ++ V K R + TGK A +KK R +S S + + RE+ IL++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPN+I L + ++ L L +FDF+ + LTE + +++
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---------ESLTEDEATQFLK 122
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKSG---MLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L G+ + H + I H D+K N +L+DK+ +K+ DFG+++ + +
Sbjct: 123 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFG 180
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSE 334
T + APE ++ G+ D+WS G + + G G T+ E L I + E
Sbjct: 181 TPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 335 DYW 337
+Y+
Sbjct: 240 EYF 242
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 80 AVVSEE---PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 128/303 (42%), Gaps = 50/303 (16%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
+A+ L ++G+G Y +V K + +G+I+A+K++R E E + + +++ D
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 168 HPNVIKLEG---------LATSRMQYSLYLVFDFMQSDLTKIICRPGQ---KLTEPQVKC 215
P +++ G + M S + ++ S L +I P + K+T VK
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVI--PEEILGKITLATVK- 136
Query: 216 YMQQLLSGLQHCHER-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV 274
L H E I+HRDIK SN+L+D+SG +K+ DFG+S + T
Sbjct: 137 -------ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TRDAG 187
Query: 275 TLWYRAPELLLGSTD---YGVGIDLWSAGCLLAEMFIGRPLMPGRTEV-EQLHRIFKLCG 330
Y APE + S Y V D+WS G L E+ GR P V +QL ++ K G
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--G 245
Query: 331 TPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
P PQ R EF PS + L D + R L++
Sbjct: 246 DP---------------PQLSNSEER----EFSPSFINFVNLCLTKDESKRPKYKELLKH 286
Query: 391 EFF 393
F
Sbjct: 287 PFI 289
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 46 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 102
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 103 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 161 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 219
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVM 242
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEPE-SVKFMAREIRILQK 165
D Y+ ++G G ++ V K R + TGK A +KK R +S S + + RE+ IL++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPN+I L + ++ L L +FDF+ + LTE + +++
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---------ESLTEDEATQFLK 136
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKSG---MLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L G+ + H + I H D+K N +L+DK+ +K+ DFG+++ + +
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFG 194
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSE 334
T + APE ++ G+ D+WS G + + G G T+ E L I + E
Sbjct: 195 TPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 335 DYW 337
+Y+
Sbjct: 254 EYF 256
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 19 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 75
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 76 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 192
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVM 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 36 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 92
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 93 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 151 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 209
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVM 232
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++K+ H +++L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKIRHEKLVQLY 79
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 80 AVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 111/222 (50%), Gaps = 14/222 (6%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYA 80
Query: 177 LATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +H
Sbjct: 81 VVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGI 294
RD+ A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 295 DLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 126/254 (49%), Gaps = 19/254 (7%)
Query: 118 VGQGTYSNVYKARDRDTGKI---VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G + V R + GK VA+K ++ +E + F+ E I+ + DHPN+I L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIHL 88
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T + +V ++M++ L + + + T Q+ ++ + +G+++ + G +
Sbjct: 89 EGVVTK--SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELLLGSTDYG 291
HRD+ A N+LI+ + + K++DFGLS + T+R + + + APE + +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAFRKFT 205
Query: 292 VGIDLWSAGCLLAEM--FIGRPLMPGRTE-----VEQLHRIFKLCGTPSEDYWKKMKLTT 344
D+WS G ++ E+ + RP + VE+ +R+ P+ Y ++ L
Sbjct: 206 SASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALY--QLMLDC 263
Query: 345 TFRPQHYKPSFREV 358
+ ++ +P F E+
Sbjct: 264 WQKERNSRPKFDEI 277
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 79
Query: 176 GLATSRMQYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M L + G+ L PQ+ Q+ SG+ + +
Sbjct: 80 AVVSEE---PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 195
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN- 170
Y L ++G G S V++ + + +I A+K V + ++ +++ EI L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 171 -VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP-QVKCYMQQLLSGLQHCH 228
+I+L + QY +Y+V + DL + + +K +P + K Y + +L + H
Sbjct: 117 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPL-TSRVVTLWYRAPEL---L 284
+ GI+H D+K +N LI GMLK+ DFG++N P + S+V T+ Y PE +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 285 LGSTDYG-------VGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
S + G D+WS GC+L M G+ P ++ +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
+GQG +NV++ R + TG + A+K V + S V RE +L+KL+H N++KL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 178 ATSRMQYSLYLVFDFMQ-SDLTKIICRPGQK--LTEPQVKCYMQQLLSGLQHCHERGILH 234
L+ +F L ++ P L E + ++ ++ G+ H E GI+H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 235 RDIKASNLLI----DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST-- 288
R+IK N++ D + K+ DFG + ++ T Y P++ +
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVXLYGTEEYLHPDMYERAVLR 193
Query: 289 -----DYGVGIDLWSAGCLLAEMFIG----RPLMPGRTEVEQLHRIFKLCGTPS 333
YG +DLWS G G RP R E +++I + G PS
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 114 KLAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
K+ +G+G + V Y + TG++VA+K ++ D P+ +EI IL+ L H
Sbjct: 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLYHE 93
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
++IK +G SL LV +++ L + P + Q+ + QQ+ G+ + H
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR----VVTLWYRAPELL 284
+ +HRD+ A N+L+D ++KI DFGL+ +P+ R WY APE L
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK-AVPEGHEXYRVREDGDSPVFWY-APECL 209
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
Y D+WS G L E+
Sbjct: 210 KEYKFY-YASDVWSFGVTLYELL 231
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKLD 167
+D Y+ +G G S V+ ARD + VA+K +R D + +P RE + L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HPNVIKL--EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HP ++ + G A + Y+V +++ + I +T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPEL 283
H+ GI+HRD+K +N+LI + +K+ DFG++ + V T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEV 319
G + D++S GC+L E+ G P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGL+ + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 23/272 (8%)
Query: 97 PKEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFM 156
P E A +P+ + +K K+G G + V+ A K VA+K ++ + E+ F+
Sbjct: 4 PWEKDAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEA--FL 58
Query: 157 AREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVK 214
A E +++ L H ++KL + T +Y++ +FM S L + G K P++
Sbjct: 59 A-EANVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 114
Query: 215 CYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV 274
+ Q+ G+ +R +HRD++A+N+L+ S + KIADFGL+ +
Sbjct: 115 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 174
Query: 275 TLWYRAPELL-LGSTDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTE------VEQLHRIF 326
+ + APE + GS + + D+WS G LL E+ GR PG + +E+ +R+
Sbjct: 175 PIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 232
Query: 327 KLCGTPSEDYWKKMKLTTTFRPQHYKPSFREV 358
+ P E Y M+ RP+ +P+F +
Sbjct: 233 RPENCPEELYNIMMRCWKN-RPEE-RPTFEYI 262
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN- 170
Y L ++G G S V++ + + +I A+K V + ++ +++ EI L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 171 -VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP-QVKCYMQQLLSGLQHCH 228
+I+L + QY +Y+V + DL + + +K +P + K Y + +L + H
Sbjct: 117 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPL-TSRVVTLWYRAPEL---L 284
+ GI+H D+K +N LI GMLK+ DFG++N P + S+V T+ Y PE +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 285 LGSTDYG-------VGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
S + G D+WS GC+L M G+ P ++ +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 114 KLAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
K+ +G+G + V Y + TG++VA+K ++ D P+ +EI IL+ L H
Sbjct: 18 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCG-PQHRSGWKQEIDILRTLYHE 76
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
++IK +G + + SL LV +++ L + P + Q+ + QQ+ G+ + H
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV------TLWYRAPE 282
+ +HR++ A N+L+D ++KI DFGL+ +P +G RV WY APE
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAK-AVP--EGHEYYRVREDGDSPVFWY-APE 190
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMF 307
L + D+WS G L E+
Sbjct: 191 -CLKEYKFYYASDVWSFGVTLYELL 214
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 23/272 (8%)
Query: 97 PKEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFM 156
P E A +P+ + +K K+G G + V+ A K VA+K ++ + E+ F+
Sbjct: 177 PWEKDAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEA--FL 231
Query: 157 AREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVK 214
A E +++ L H ++KL + T +Y++ +FM S L + G K P++
Sbjct: 232 A-EANVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 287
Query: 215 CYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV 274
+ Q+ G+ +R +HRD++A+N+L+ S + KIADFGL+ +
Sbjct: 288 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347
Query: 275 TLWYRAPELL-LGSTDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTE------VEQLHRIF 326
+ + APE + GS + + D+WS G LL E+ GR PG + +E+ +R+
Sbjct: 348 PIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 405
Query: 327 KLCGTPSEDYWKKMKLTTTFRPQHYKPSFREV 358
+ P E Y M+ RP+ +P+F +
Sbjct: 406 RPENCPEELYNIMMRCWKN-RPEE-RPTFEYI 435
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN- 170
Y L ++G G S V++ + + +I A+K V + ++ +++ EI L KL +
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 171 -VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP-QVKCYMQQLLSGLQHCH 228
+I+L + QY +Y+V + DL + + +K +P + K Y + +L + H
Sbjct: 70 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 125
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT-SRVVTLWYRAPEL---L 284
+ GI+H D+K +N LI GMLK+ DFG++N P + S+V T+ Y PE +
Sbjct: 126 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 285 LGSTDYG-------VGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
S + G D+WS GC+L M G+ P ++ +LH I
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 234
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 18/237 (7%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+S + K+G G + V+ ++ K VA+K ++ T SV+ E +++ L H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTM---SVQAFLEEANLMKTLQHD 67
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
+++L + T + +Y++ +FM S L + G K+ P++ + Q+ G+ +
Sbjct: 68 KLVRLYAVVTK--EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL-LG 286
+ +HRD++A+N+L+ +S M KIADFGL+ + + + APE + G
Sbjct: 126 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 287 STDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTEVE------QLHRIFKLCGTPSEDY 336
+ + ++WS G LL E+ G+ PGRT + Q +R+ ++ P E Y
Sbjct: 186 C--FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELY 240
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 114 KLAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
K+ +G+G + V Y + TG++VA+K ++ D P+ +EI IL+ L H
Sbjct: 18 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCG-PQHRSGWKQEIDILRTLYHE 76
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
++IK +G + + SL LV +++ L + P + Q+ + QQ+ G+ + H
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV------TLWYRAPE 282
+ +HR++ A N+L+D ++KI DFGL+ +P +G RV WY APE
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAK-AVP--EGHEYYRVREDGDSPVFWY-APE 190
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMF 307
L + D+WS G L E+
Sbjct: 191 -CLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V ++M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGL + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V + M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 163 LSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+VG+G++ V++ +D+ TG A+KKVR + F E+ L P ++ L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 133
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
++++ L ++I + G L E + Y+ Q L GL++ H R ILH D
Sbjct: 134 AVREGPWVNIFMEL-LEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 237 IKASNLLIDKSG-MLKIADFGLSNFFIPKQKGP--LTSRVV--TLWYRAPELLLGSTDYG 291
+KA N+L+ G + DFG + P G LT + T + APE+++G
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CD 250
Query: 292 VGIDLWSAGCLLAEMFIG 309
+D+WS+ C++ M G
Sbjct: 251 AKVDIWSSCCMMLHMLNG 268
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 103 GLVPKSA---------DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPES 152
GLVP+ + D Y+ +G G S V+ ARD + VA+K +R D + +P
Sbjct: 13 GLVPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSF 72
Query: 153 VKFMAREIRILQKLDHPNVIKL--EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTE 210
RE + L+HP ++ + G A + Y+V +++ + I +T
Sbjct: 73 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 132
Query: 211 PQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT 270
+ + L H+ GI+HRD+K +N++I + +K+ DFG++
Sbjct: 133 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 271 SRVV--TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEV 319
+ V T Y +PE G + D++S GC+L E+ G P G + V
Sbjct: 193 TAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 14/219 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ PE+ +E ++++KL H +++L
Sbjct: 191 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLY 246
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + +Y+V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 247 AVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 303
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL + + + APE L + +
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIK 362
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKL 328
D+WS G LL E+ GR P M R ++Q+ R +++
Sbjct: 363 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 401
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
+VG+G++ V++ +D+ TG A+KKVR + F E+ L P ++ L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 117
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
++++ L ++I + G L E + Y+ Q L GL++ H R ILH D
Sbjct: 118 AVREGPWVNIFMEL-LEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRRILHGD 175
Query: 237 IKASNLLIDKSG-MLKIADFGLSNFFIPKQKGP--LTSRVV--TLWYRAPELLLGSTDYG 291
+KA N+L+ G + DFG + P G LT + T + APE+++G
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CD 234
Query: 292 VGIDLWSAGCLLAEMFIG 309
+D+WS+ C++ M G
Sbjct: 235 AKVDIWSSCCMMLHMLNG 252
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 48 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 104
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V + M++ L + + + T Q+ ++ + SG+++
Sbjct: 105 HPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 221
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 12/203 (5%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLD 167
S DK+ VG G + V R + K VA+K ++ +E + F+ E I+ + D
Sbjct: 19 SIDKV--VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFD 75
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
HPN+I+LEG+ T + +V + M++ L + + + T Q+ ++ + SG+++
Sbjct: 76 HPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 227 CHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELL 284
+ G +HRD+ A N+LI+ + + K++DFGLS + T+R + + + +PE
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-A 192
Query: 285 LGSTDYGVGIDLWSAGCLLAEMF 307
+ + D+WS G +L E+
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVM 215
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 14/223 (6%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
K+GQG + V+ T + VA+K ++ T PE+ +E ++++KL H +++L
Sbjct: 14 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLY 69
Query: 176 GLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + + +V ++M S L + G+ L PQ+ Q+ SG+ + +
Sbjct: 70 AVVSEE---PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRD++A+N+L+ ++ + K+ADFGL+ + + + APE L + +
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIK 185
Query: 294 IDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKLCGTP 332
D+WS G LL E+ GR P M R ++Q+ R +++ P
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 228
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN- 170
Y L ++G G S V++ + + +I A+K V + ++ +++ EI L KL +
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 171 -VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP-QVKCYMQQLLSGLQHCH 228
+I+L + QY +Y+V + DL + + +K +P + K Y + +L + H
Sbjct: 73 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 128
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPL-TSRVVTLWYRAPEL---L 284
+ GI+H D+K +N LI GMLK+ DFG++N P + S+V T+ Y PE +
Sbjct: 129 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 285 LGSTDYG-------VGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
S + G D+WS GC+L M G+ P ++ +LH I
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 237
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN- 170
Y L ++G G S V++ + + +I A+K V + ++ +++ EI L KL +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 171 -VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP-QVKCYMQQLLSGLQHCH 228
+I+L + QY +Y+V + DL + + +K +P + K Y + +L + H
Sbjct: 89 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 144
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPL-TSRVVTLWYRAPEL---L 284
+ GI+H D+K +N LI GMLK+ DFG++N P + S+V T+ Y PE +
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 285 LGSTDYG-------VGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
S + G D+WS GC+L M G+ P ++ +LH I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 51/305 (16%)
Query: 103 GLVPKSA-------DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKF 155
GLVP+ + D Y +G G+YS + + T A+K + +P
Sbjct: 13 GLVPRGSHMNLVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP----- 67
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKL-TEPQ 212
+ EI IL + HPN+I L+ + +YLV + M+ +L I R QK +E +
Sbjct: 68 -SEEIEILLRYGQHPNIITLKDVYDDGKH--VYLVTELMRGGELLDKILR--QKFFSERE 122
Query: 213 VKCYMQQLLSGLQHCHERGILHRDIKASNLL-IDKSG---MLKIADFGLSNFFIPKQKGP 268
+ + +++ H +G++HRD+K SN+L +D+SG L+I DFG + + + G
Sbjct: 123 ASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGL 181
Query: 269 LTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIG-RPLM--PGRTEVEQLHRI 325
L + T + APE +L Y G D+WS G LL M G P P T E L RI
Sbjct: 182 LMTPCYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
Query: 326 FKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAA 385
T S W + T + +++ +L +DP R TA
Sbjct: 241 GSGKFTLSGGNWNTVSET----------------------AKDLVSKMLHVDPHQRLTAK 278
Query: 386 SALQN 390
LQ+
Sbjct: 279 QVLQH 283
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKLD 167
+D Y+ +G G S V+ ARD + VA+K +R D + +P RE + L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HPNVIKL--EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HP ++ + G A + Y+V +++ + I +T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPEL 283
H+ GI+HRD+K +N++I + +K+ DFG++ + V T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEV 319
G + D++S GC+L E+ G P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN- 170
Y L ++G G S V++ + + +I A+K V + ++ +++ EI L KL +
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 171 -VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP-QVKCYMQQLLSGLQHCH 228
+I+L + QY +Y+V + DL + + +K +P + K Y + +L + H
Sbjct: 69 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 124
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT-SRVVTLWYRAPEL---L 284
+ GI+H D+K +N LI GMLK+ DFG++N P + S+V T+ Y PE +
Sbjct: 125 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 285 LGSTDYG-------VGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
S + G D+WS GC+L M G+ P ++ +LH I
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 233
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN- 170
Y L ++G G S V++ + + +I A+K V + ++ +++ EI L KL +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 171 -VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP-QVKCYMQQLLSGLQHCH 228
+I+L + QY +Y+V + DL + + +K +P + K Y + +L + H
Sbjct: 89 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 144
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPL-TSRVVTLWYRAPEL---L 284
+ GI+H D+K +N LI GMLK+ DFG++N P + S+V T+ Y PE +
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 285 LGSTDYG-------VGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
S + G D+WS GC+L M G+ P ++ +LH I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKLD 167
+D Y+ +G G S V+ ARD + VA+K +R D + +P RE + L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HPNVIKL--EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HP ++ + G A + Y+V +++ + I +T + + L
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPEL 283
H+ GI+HRD+K +N++I + +K+ DFG++ + V T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEV 319
G + D++S GC+L E+ G P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKLD 167
+D Y+ +G G S V+ ARD + VA+K +R D + +P RE + L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HPNVIKL--EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HP ++ + G A + Y+V +++ + I +T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPEL 283
H+ GI+HRD+K +N++I + +K+ DFG++ + V T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEV 319
G + D++S GC+L E+ G P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 112 YDKLAK-------VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
YD+L K +G G ++ V A TG++VA+K + +T + + + EI L+
Sbjct: 5 YDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALK 63
Query: 165 KLDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYM 217
L H ++ +L + + + + L +FD++ S +L+E + +
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ---------DRLSEEETRVVF 114
Query: 218 QQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLW 277
+Q++S + + H +G HRD+K NLL D+ LK+ DFGL + L + +L
Sbjct: 115 RQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 278 YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIG 309
Y APEL+ G + G D+WS G LL + G
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
+S + ++G G + V+ K VA+K ++ T PES E +I++KL H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSPES---FLEEAQIMKKLKHD 64
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
+++L + + +Y+V ++M S L + G+ L P + Q+ +G+ +
Sbjct: 65 KLVQLYAVVSEE---PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+HRD++++N+L+ + KIADFGL+ + + + APE L
Sbjct: 122 ERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 288 TDYGVGIDLWSAGCLLAEMFI-GR---PLMPGRTEVEQLHRIFKL 328
+ + D+WS G LL E+ GR P M R +EQ+ R +++
Sbjct: 182 R-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 21/230 (9%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN- 170
Y L ++G G S V++ + + +I A+K V + ++ +++ EI L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 171 -VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEP-QVKCYMQQLLSGLQHCH 228
+I+L + QY +Y+V + DL + + +K +P + K Y + +L + H
Sbjct: 117 KIIRLYDYEITD-QY-IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPL-TSRVVTLWYRAPEL---L 284
+ GI+H D+K +N LI GMLK+ DFG++N P + S+V + Y PE +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 285 LGSTDYG-------VGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRIF 326
S + G D+WS GC+L M G+ P ++ +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 128/254 (50%), Gaps = 19/254 (7%)
Query: 118 VGQGTYSNVYKARDRDTGKI---VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G V R R G+ VA+K ++ +E + F++ E I+ + DHPN+I+L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS-EASIMGQFDHPNIIRL 115
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQ-KLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T R + ++ +V ++M++ R + T Q+ ++ + +G+++ + G +
Sbjct: 116 EGVVT-RGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
HRD+ A N+L+D + + K++DFGLS P T + + + APE + T +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT-FS 232
Query: 292 VGIDLWSAGCLLAEM--FIGRPL--MPGR---TEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
D+WS G ++ E+ + RP M R + VE+ +R+ G P + ++ L
Sbjct: 233 SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALH--QLMLDC 290
Query: 345 TFRPQHYKPSFREV 358
+ + +P F ++
Sbjct: 291 WHKDRAQRPRFSQI 304
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 114/230 (49%), Gaps = 18/230 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ ++ K VA+K ++ T SV+ E +++ L H +++L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 177 LATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
+ T + +Y++ ++M S L + G K+ P++ + Q+ G+ + + +H
Sbjct: 76 VVTR--EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 133
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL-LGSTDYGVG 293
RD++A+N+L+ +S M KIADFGL+ + + + APE + G + +
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC--FTIK 191
Query: 294 IDLWSAGCLLAEMFI-GRPLMPGRTEVE------QLHRIFKLCGTPSEDY 336
D+WS G LL E+ G+ PGRT + Q +R+ ++ P E Y
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELY 241
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 8/219 (3%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKLDHPN 170
++ L +G+G++ V + + T ++ A+K ++ D + + V+ E R+L P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+ M LY V +++ DL I + G + EP Y ++ GL
Sbjct: 403 FLTQLHSCFQTMD-RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQS 460
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGST 288
+GI++RD+K N+++D G +KIADFG+ I G T T Y APE ++
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI--WDGVTTKXFCGTPDYIAPE-IIAYQ 517
Query: 289 DYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
YG +D W+ G LL EM G+ G E E I +
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH 168
AD + + ++G+G Y V K R +G+I A+K++R + E + + + +D
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 169 PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKI---ICRPGQKLTEPQVKCYMQQLLSGLQ 225
P + G A R + +++ + + L K + GQ + E + ++ L+
Sbjct: 93 PFTVTFYG-ALFR-EGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 150
Query: 226 HCHER-GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
H H + ++HRD+K SN+LI+ G +K DFG+S + + + + Y APE +
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP--YXAPERI 208
Query: 285 ---LGSTDYGVGIDLWSAGCLLAEMFIGR-PLMPGRTEVEQLHRI 325
L Y V D+WS G E+ I R P T +QL ++
Sbjct: 209 NPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKLD 167
+D Y+ +G G S V+ ARD + VA+K +R D + +P RE + L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HPNVIKL--EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
HP ++ + G A + Y+V +++ + I +T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPEL 283
H+ GI+HRD+K +N++I + +K+ DFG++ + V T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPG 315
G + D++S GC+L E+ G P G
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G+G++ V++ +D+ TG A+KKVR + F E+ L P ++ L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 131
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
++++ L ++I + G L E + Y+ Q L GL++ H R ILH D
Sbjct: 132 AVREGPWVNIFMEL-LEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 237 IKASNLLIDKSG-MLKIADFGLSNFFIPKQKGP--LTSRVV--TLWYRAPELLLGSTDYG 291
+KA N+L+ G + DFG + P G LT + T + APE+++G
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CD 248
Query: 292 VGIDLWSAGCLLAEMFIG 309
+D+WS+ C++ M G
Sbjct: 249 AKVDIWSSCCMMLHMLNG 266
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 101/196 (51%), Gaps = 10/196 (5%)
Query: 118 VGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G + V R + GK VA+K ++ +E + F+ E I+ + DHPNV+ L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLC-EASIMGQFDHPNVVHL 109
Query: 175 EGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T + +V +FM++ L + + + T Q+ ++ + +G+++ + G +
Sbjct: 110 EGVVTR--GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
HRD+ A N+L++ + + K++DFGLS P+ T + + + APE + +
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE-AIQYRKFT 226
Query: 292 VGIDLWSAGCLLAEMF 307
D+WS G ++ E+
Sbjct: 227 SASDVWSYGIVMWEVM 242
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 14/211 (6%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
D ++ L +G+G +S V + + TG++ A+K + ++D + V E +L D
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-MQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
+ +L A Y LYLV ++ + DL ++ + G+++ + Y+ +++ +
Sbjct: 121 RWITQLH-FAFQDENY-LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPELLL 285
H G +HRDIK N+L+D+ G +++ADFG + + G + S V T Y +PE+L
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 286 GSTDYGVG------IDLWSAGCLLAEMFIGR 310
D W+ G EMF G+
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 111 SYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTS-EPESVKFMAREIRILQKLDHP 169
++ L +G+G++ V + + T ++ A+K ++ D + + V+ E R+L P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
+ M LY V +++ DL I + G + EP Y ++ GL
Sbjct: 81 PFLTQLHSCFQTMD-RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ 138
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV-TLWYRAPELLLGS 287
+GI++RD+K N+++D G +KIADFG+ I G T T Y APE ++
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI--WDGVTTKXFCGTPDYIAPE-IIAY 195
Query: 288 TDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRI 325
YG +D W+ G LL EM G+ G E E I
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 128/254 (50%), Gaps = 19/254 (7%)
Query: 118 VGQGTYSNVYKARDRDTGKI---VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G V R R G+ VA+K ++ +E + F++ E I+ + DHPN+I+L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS-EASIMGQFDHPNIIRL 115
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQ-KLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T R + ++ +V ++M++ R + T Q+ ++ + +G+++ + G +
Sbjct: 116 EGVVT-RGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYG 291
HRD+ A N+L+D + + K++DFGLS P T + + + APE + T +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT-FS 232
Query: 292 VGIDLWSAGCLLAEM--FIGRPL--MPGR---TEVEQLHRIFKLCGTPSEDYWKKMKLTT 344
D+WS G ++ E+ + RP M R + VE+ +R+ G P + ++ L
Sbjct: 233 SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALH--QLMLDC 290
Query: 345 TFRPQHYKPSFREV 358
+ + +P F ++
Sbjct: 291 WHKDRAQRPRFSQI 304
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-D 167
+D Y +G G+YS + + T A+K + +P + EI IL +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP------SEEIEILLRYGQ 79
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKL-TEPQVKCYMQQLLSGLQ 225
HPN+I L+ + +YLV + M+ +L I R QK +E + + + ++
Sbjct: 80 HPNIITLKDVYDDGKH--VYLVTELMRGGELLDKILR--QKFFSEREASFVLHTIGKTVE 135
Query: 226 HCHERGILHRDIKASNLL-IDKSG---MLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+ H +G++HRD+K SN+L +D+SG L+I DFG + + + G L + T + AP
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMTPCYTANFVAP 194
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIG-RPLM--PGRTEVEQLHRIFKLCGTPSEDYWK 338
E +L Y G D+WS G LL M G P P T E L RI T S W
Sbjct: 195 E-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
Query: 339 KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+ T +++ +L +DP R TA LQ+
Sbjct: 254 TVSETAK----------------------DLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 97 PKEVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFM 156
P E A +P+ + +K K+G G + V+ A K VA+K ++ + E+ F+
Sbjct: 171 PWEKDAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEA--FL 225
Query: 157 AREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVK 214
A E +++ L H ++KL + T +Y++ +FM S L + G K P++
Sbjct: 226 A-EANVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 281
Query: 215 CYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV 274
+ Q+ G+ +R +HRD++A+N+L+ S + KIADFGL+ K P+
Sbjct: 282 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV---GAKFPIK---- 334
Query: 275 TLWYRAPELL-LGSTDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTE------VEQLHRIF 326
+ APE + GS + + D+WS G LL E+ GR PG + +E+ +R+
Sbjct: 335 ---WTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 389
Query: 327 KLCGTPSEDYWKKMKLTTTFRPQHYKPSFREV 358
+ P E Y M+ RP+ +P+F +
Sbjct: 390 RPENCPEELYNIMMRCWKN-RPEE-RPTFEYI 419
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSE--PESVKFMAREIRILQKLDHPNVIKLE 175
+G G + VY+A G VA+K R D E ++++ + +E ++ L HPN+I L
Sbjct: 15 IGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 176 GLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG--- 231
G+ + +L LV +F + L +++ G+++ + + Q+ G+ + H+
Sbjct: 73 GVCLK--EPNLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 232 ILHRDIKASNLLI-------DKSG-MLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
I+HRD+K+SN+LI D S +LKI DFGL+ + K S + APE+
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYAWMAPEV 185
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIG 309
+ S + G D+WS G LL E+ G
Sbjct: 186 IRASM-FSKGSDVWSYGVLLWELLTG 210
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 6/215 (2%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT--SEPESVKFMAREIRILQKLDHPNVI 172
L +G+G++ V AR + A+K ++ + E M+ +L+ + HP ++
Sbjct: 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLV 102
Query: 173 KLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L + + LY V D++ + + EP+ + Y ++ S L + H I
Sbjct: 103 GLH--FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI 160
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
++RD+K N+L+D G + + DFGL I + ++ T Y APE +L Y
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCKENI-EHNSTTSTFCGTPEYLAPE-VLHKQPYDR 218
Query: 293 GIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
+D W G +L EM G P R E I
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 118 VGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G + V + GK VA+K ++ +E + F++ E I+ + DHPNVI L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS-EASIMGQFDHPNVIHL 99
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T + ++ +FM++ L + + + T Q+ ++ + +G+++ + +
Sbjct: 100 EGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV----VTLWYRAPELLLGSTD 289
HRD+ A N+L++ + + K++DFGLS F P + + + + APE +
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE-AIQYRK 216
Query: 290 YGVGIDLWSAGCLLAEM 306
+ D+WS G ++ E+
Sbjct: 217 FTSASDVWSYGIVMWEV 233
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 29/249 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESV----KFMAREIRI 162
K D YD ++G G ++ V K R++ TG A K ++ S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 163 LQKLDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKC 215
L+++ HPN+I L + +R L L +FDF+ + L+E +
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK---------ESLSEEEATS 119
Query: 216 YMQQLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTS 271
+++Q+L G+ + H + I H D+K N +L+DK+ +K+ DFGL++ + G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFK 176
Query: 272 RVV-TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
+ T + APE ++ G+ D+WS G + + G G T+ E L I +
Sbjct: 177 NIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 331 TPSEDYWKK 339
E+++ +
Sbjct: 236 DFDEEFFSQ 244
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G++ V++A G VA+K + E V RE+ I+++L HPN++ G
Sbjct: 44 KIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPG--QKLTEPQVKCYMQQLLSGLQHCHERG--I 232
T S+ + + L +++ + G ++L E + + G+ + H R I
Sbjct: 102 AVTQPPNLSIVTEY-LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPELLLG---- 286
+HRD+K+ NLL+DK +K+ DFGLS K L S+ T + APE+L
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 287 --STDYGVGIDLWSAGCL 302
S Y G+ LW L
Sbjct: 218 EKSDVYSFGVILWELATL 235
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 29/247 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE----SVKFMAREIRI 162
K D YD ++G G ++ V K R++ TG A K ++ S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 163 LQKLDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKC 215
L+++ H NVI L + +R L L +FDF+ + L+E +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---------ESLSEEEATS 119
Query: 216 YMQQLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTS 271
+++Q+L G+ + H + I H D+K N +L+DK+ +K+ DFGL++ + G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFK 176
Query: 272 RVV-TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
+ T + APE ++ G+ D+WS G + + G G T+ E L I +
Sbjct: 177 NIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 331 TPSEDYW 337
E+++
Sbjct: 236 DFDEEFF 242
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 120
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 174
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 175 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 331 TPSEDYW 337
++Y+
Sbjct: 234 EFEDEYF 240
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 120
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 174
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 175 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 331 TPSEDYW 337
++Y+
Sbjct: 234 EFEDEYF 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 29/249 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE----SVKFMAREIRI 162
K D YD ++G G ++ V K R++ TG A K ++ S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 163 LQKLDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKC 215
L+++ H NVI L + +R L L +FDF+ + L+E +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---------ESLSEEEATS 119
Query: 216 YMQQLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTS 271
+++Q+L G+ + H + I H D+K N +L+DK+ +K+ DFGL++ + G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFK 176
Query: 272 RVV-TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
+ T + APE ++ G+ D+WS G + + G G T+ E L I +
Sbjct: 177 NIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 331 TPSEDYWKK 339
E+++ +
Sbjct: 236 DFDEEFFSQ 244
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 29/247 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE----SVKFMAREIRI 162
K D YD ++G G ++ V K R++ TG A K ++ S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 163 LQKLDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKC 215
L+++ H NVI L + +R L L +FDF+ + L+E +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---------ESLSEEEATS 119
Query: 216 YMQQLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTS 271
+++Q+L G+ + H + I H D+K N +L+DK+ +K+ DFGL++ + G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFK 176
Query: 272 RVV-TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
+ T + APE ++ G+ D+WS G + + G G T+ E L I +
Sbjct: 177 NIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 331 TPSEDYW 337
E+++
Sbjct: 236 DFDEEFF 242
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ + K VA+K +R E E ++ KL HP +++L G
Sbjct: 14 EIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYG 69
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILHR 235
+ Q + LVF+FM+ R + L + M + G+ + E ++HR
Sbjct: 70 VCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHR 127
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGID 295
D+ A N L+ ++ ++K++DFG++ F + Q T + + +PE + + Y D
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSD 186
Query: 296 LWSAGCLLAEMF 307
+WS G L+ E+F
Sbjct: 187 VWSFGVLMWEVF 198
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEPE-SVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE-SVKFMAREIRILQ 164
P D + +G+G + V+ + + TGK+ A KK+ + + E +IL
Sbjct: 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICR-----PGQKLTEPQVKCYMQ 218
K+ ++ L ++ L LV M D+ I PG EP+ Y
Sbjct: 241 KVHSRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTA 296
Query: 219 QLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTL 276
Q++SGL+H H+R I++RD+K N+L+D G ++I+D GL+ + + G ++ T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTP 353
Query: 277 WYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTE 318
+ APELLLG +Y +D ++ G L EM R R E
Sbjct: 354 GFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 29/247 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE----SVKFMAREIRI 162
K D YD ++G G ++ V K R++ TG A K ++ S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 163 LQKLDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKC 215
L+++ H NVI L + +R L L +FDF+ + L+E +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---------ESLSEEEATS 119
Query: 216 YMQQLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTS 271
+++Q+L G+ + H + I H D+K N +L+DK+ +K+ DFGL++ + G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFK 176
Query: 272 RVV-TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
+ T + APE ++ G+ D+WS G + + G G T+ E L I +
Sbjct: 177 NIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 331 TPSEDYW 337
E+++
Sbjct: 236 DFDEEFF 242
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE-SVKFMAREIRILQ 164
P D + +G+G + V+ + + TGK+ A KK+ + + E +IL
Sbjct: 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICR-----PGQKLTEPQVKCYMQ 218
K+ ++ L ++ L LV M D+ I PG EP+ Y
Sbjct: 241 KVHSRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTA 296
Query: 219 QLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTL 276
Q++SGL+H H+R I++RD+K N+L+D G ++I+D GL+ + + G ++ T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTP 353
Query: 277 WYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTE 318
+ APELLLG +Y +D ++ G L EM R R E
Sbjct: 354 GFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE-SVKFMAREIRILQ 164
P D + +G+G + V+ + + TGK+ A KK+ + + E +IL
Sbjct: 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICR-----PGQKLTEPQVKCYMQ 218
K+ ++ L ++ L LV M D+ I PG EP+ Y
Sbjct: 241 KVHSRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTA 296
Query: 219 QLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTL 276
Q++SGL+H H+R I++RD+K N+L+D G ++I+D GL+ + + G ++ T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTP 353
Query: 277 WYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTE 318
+ APELLLG +Y +D ++ G L EM R R E
Sbjct: 354 GFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 106 PKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE-SVKFMAREIRILQ 164
P D + +G+G + V+ + + TGK+ A KK+ + + E +IL
Sbjct: 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICR-----PGQKLTEPQVKCYMQ 218
K+ ++ L ++ L LV M D+ I PG EP+ Y
Sbjct: 241 KVHSRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTA 296
Query: 219 QLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTL 276
Q++SGL+H H+R I++RD+K N+L+D G ++I+D GL+ + + G ++ T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKGYAGTP 353
Query: 277 WYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTE 318
+ APELLLG +Y +D ++ G L EM R R E
Sbjct: 354 GFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 29/249 (11%)
Query: 107 KSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPE----SVKFMAREIRI 162
K D YD ++G G ++ V K R++ TG A K ++ S S + + RE+ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 163 LQKLDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKC 215
L+++ H NVI L + +R L L +FDF+ + L+E +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---------ESLSEEEATS 119
Query: 216 YMQQLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTS 271
+++Q+L G+ + H + I H D+K N +L+DK+ +K+ DFGL++ + G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFK 176
Query: 272 RVV-TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
+ T + APE ++ G+ D+WS G + + G G T+ E L I +
Sbjct: 177 NIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 331 TPSEDYWKK 339
E+++ +
Sbjct: 236 DFDEEFFSQ 244
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ + K VA+K +R E E ++ KL HP +++L G
Sbjct: 14 EIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYG 69
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILHR 235
+ Q + LVF+FM+ R + L + M + G+ + E ++HR
Sbjct: 70 VCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 127
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGID 295
D+ A N L+ ++ ++K++DFG++ F + Q T + + +PE + + Y D
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSD 186
Query: 296 LWSAGCLLAEMF 307
+WS G L+ E+F
Sbjct: 187 VWSFGVLMWEVF 198
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ + K VA+K +R E E ++ KL HP +++L G
Sbjct: 17 EIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYG 72
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILHR 235
+ Q + LVF+FM+ R + L + M + G+ + E ++HR
Sbjct: 73 VCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 130
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGID 295
D+ A N L+ ++ ++K++DFG++ F + Q T + + +PE + + Y D
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSD 189
Query: 296 LWSAGCLLAEMF 307
+WS G L+ E+F
Sbjct: 190 VWSFGVLMWEVF 201
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ + K VA+K +R E E ++ KL HP +++L G
Sbjct: 12 EIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYG 67
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILHR 235
+ Q + LVF+FM+ R + L + M + G+ + E ++HR
Sbjct: 68 VCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGID 295
D+ A N L+ ++ ++K++DFG++ F + Q T + + +PE + + Y D
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSD 184
Query: 296 LWSAGCLLAEMF 307
+WS G L+ E+F
Sbjct: 185 VWSFGVLMWEVF 196
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
K+G G++ V++A G VA+K + E V RE+ I+++L HPN++ G
Sbjct: 44 KIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPG--QKLTEPQVKCYMQQLLSGLQHCHERG--I 232
T S+ + + L +++ + G ++L E + + G+ + H R I
Sbjct: 102 AVTQPPNLSIVTEY-LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPELLLG---- 286
+HR++K+ NLL+DK +K+ DFGLS K L+S+ T + APE+L
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 287 --STDYGVGIDLWSAGCL 302
S Y G+ LW L
Sbjct: 218 EKSDVYSFGVILWELATL 235
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKSG---MLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLYL-------VFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKSG---MLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPAFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 114 KLAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
K+ +G+G + V Y + TG++VA+K ++ + P+ REI IL+ L H
Sbjct: 13 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHE 71
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
+++K +G + + S+ LV +++ L + P + Q+ + QQ+ G+ + H
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV------TLWYRAPE 282
+ +HR + A N+L+D ++KI DFGL+ +P +G RV WY APE
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAK-AVP--EGHEYYRVREDGDSPVFWY-APE 185
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMF 307
L Y D+WS G L E+
Sbjct: 186 CLKECKFY-YASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 114 KLAKVGQGTYSNV----YKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
K+ +G+G + V Y + TG++VA+K ++ + P+ REI IL+ L H
Sbjct: 12 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHE 70
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCH 228
+++K +G + + S+ LV +++ L + P + Q+ + QQ+ G+ + H
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 229 ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV------TLWYRAPE 282
+ +HR + A N+L+D ++KI DFGL+ +P +G RV WY APE
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAK-AVP--EGHEYYRVREDGDSPVFWY-APE 184
Query: 283 LLLGSTDYGVGIDLWSAGCLLAEMF 307
L Y D+WS G L E+
Sbjct: 185 CLKECKFY-YASDVWSFGVTLYELL 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 118 VGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G + V R + GK VA+K ++ ++ + F++ E I+ + DHPN+I L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHPNIIHL 95
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T + ++ ++M++ L + + + T Q+ ++ + SG+++ + +
Sbjct: 96 EGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELLLGSTDYG 291
HRD+ A N+L++ + + K++DFG+S + T+R + + + APE + +
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAYRKFT 212
Query: 292 VGIDLWSAGCLLAEMF 307
D+WS G ++ E+
Sbjct: 213 SASDVWSYGIVMWEVM 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 156 MAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSD-------LTKIICRPGQKL 208
E++I+ + + + EG+ T+ + +Y+++++M++D ++ +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDE--VYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 209 TEPQV-KCYMQQLLSGLQHCH-ERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQ- 265
QV KC ++ +L+ + H E+ I HRD+K SN+L+DK+G +K++DFG S + + K+
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 266 KGPLTSRVVTLWYRAPELLLGSTDY-GVGIDLWSAGCLLAEMF 307
KG SR T + PE + Y G +D+WS G L MF
Sbjct: 208 KG---SR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 118 VGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G + V R + GK VA+K ++ ++ + F++ E I+ + DHPN+I L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHPNIIHL 74
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T + ++ ++M++ L + + + T Q+ ++ + SG+++ + +
Sbjct: 75 EGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELLLGSTDYG 291
HRD+ A N+L++ + + K++DFG+S + T+R + + + APE + +
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAYRKFT 191
Query: 292 VGIDLWSAGCLLAEMF 307
D+WS G ++ E+
Sbjct: 192 SASDVWSYGIVMWEVM 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 118 VGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G + V R + GK VA+K ++ ++ + F++ E I+ + DHPN+I L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHPNIIHL 80
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T + ++ ++M++ L + + + T Q+ ++ + SG+++ + +
Sbjct: 81 EGVVTK--CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSR--VVTLWYRAPELLLGSTDYG 291
HRD+ A N+L++ + + K++DFG+S + T+R + + + APE + +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAYRKFT 197
Query: 292 VGIDLWSAGCLLAEMF 307
D+WS G ++ E+
Sbjct: 198 SASDVWSYGIVMWEVM 213
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 26/210 (12%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD-HPNVIKLEG 176
+ +G ++ VY+A+D +G+ ALK R ++E E + + +E+ ++KL HPN+++
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 177 LAT------SRMQYSLYLVFDFMQSDLTKIICRPGQK--LTEPQVKCYMQQLLSGLQHCH 228
A+ Q L+ + + L + + + + L+ V Q +QH H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 229 ERG--ILHRDIKASNLLIDKSGMLKIADFGLS-------NFFIPKQKGPLT----SRVVT 275
+ I+HRD+K NLL+ G +K+ DFG + ++ Q+ L +R T
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 276 LWYRAPELLLGSTDYGVG--IDLWSAGCLL 303
YR PE++ +++ +G D+W+ GC+L
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-D 167
D Y+ +G G+YS + + T A+K + +P EI IL +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP------TEEIEILLRYGQ 74
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKL-TEPQVKCYMQQLLSGLQ 225
HPN+I L+ + +Y+V + M+ +L I R QK +E + + + ++
Sbjct: 75 HPNIITLKDVYDDGKY--VYVVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVE 130
Query: 226 HCHERGILHRDIKASNLL-IDKSG---MLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+ H +G++HRD+K SN+L +D+SG ++I DFG + + + G L + T + AP
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLMTPCYTANFVAP 189
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIG-RPLM--PGRTEVEQLHRIFKLCGTPSEDYWK 338
E +L Y D+WS G LL M G P P T E L RI + S YW
Sbjct: 190 E-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWN 248
Query: 339 KMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQN 390
+ T +++ +L +DP R TAA L++
Sbjct: 249 SVSDTAK----------------------DLVSKMLHVDPHQRLTAALVLRH 278
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 103 GLVPKSA-------DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVK 154
GLVP+ + + ++G G + V+ + K VA+K ++ + SE + ++
Sbjct: 13 GLVPRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSEDDFIE 71
Query: 155 FMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVK 214
E ++ KL HP +++L G+ Q + LVF+FM+ R + L +
Sbjct: 72 ----EAEVMMKLSHPKLVQLYGVCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 125
Query: 215 CYM-QQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV 273
M + G+ + E ++HRD+ A N L+ ++ ++K++DFG++ F + Q T
Sbjct: 126 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 185
Query: 274 VTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
+ + +PE + + Y D+WS G L+ E+F
Sbjct: 186 FPVKWASPE-VFSFSRYSSKSDVWSFGVLMWEVF 218
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 118 VGQGTYSNVYKARDRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G G + V + GK VA+K ++ +E + F++ E I+ + DHPNVI L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS-EASIMGQFDHPNVIHL 73
Query: 175 EGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
EG+ T + ++ +FM++ L + + + T Q+ ++ + +G+++ + +
Sbjct: 74 EGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFF-----IPKQKGPLTSRVVTLWYRAPELLLGST 288
HR + A N+L++ + + K++DFGLS F P L ++ W APE +
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE-AIQYR 189
Query: 289 DYGVGIDLWSAGCLLAEMF 307
+ D+WS G ++ E+
Sbjct: 190 KFTSASDVWSYGIVMWEVM 208
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 35/247 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEP-ESVKFMAREIRILQK 165
D YD ++G G ++ V K R++ TG A +KK R +S S + + RE+ IL++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 166 LDHPNVIKLEGLATSRMQYSLY-------LVFDFMQSDLTKIICRPGQKLTEPQVKCYMQ 218
+ HPNVI L + ++ L +FDF+ + LTE + +++
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK---------ESLTEEEATEFLK 121
Query: 219 QLLSGLQHCHERGILHRDIKASN-LLIDKS---GMLKIADFGLSNFFIPKQKGPLTSRVV 274
Q+L+G+ + H I H D+K N +L+D++ +KI DFGL++ K +
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFK 175
Query: 275 TLW----YRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCG 330
++ + APE++ G+ D+WS G + + G G T+ E L + +
Sbjct: 176 NIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 331 TPSEDYW 337
++Y+
Sbjct: 235 EFEDEYF 241
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 8/224 (3%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
+ ++ L +G+G + V + ++ K+ A+K + +++ + E +L D
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-MQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
+ L + +LYLV D+ + DL ++ + +L E + Y+ +++ +
Sbjct: 134 KWITTLH--YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLL-- 285
H+ +HRDIK N+L+D +G +++ADFG + + V T Y +PE+L
Sbjct: 192 HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 286 --GSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
G YG D WS G + EM G + VE +I
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
+ ++ + +G+G + V + ++T +I A+K + +++ + E +L D
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-MQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
+ L + + LYLV D+ + DL ++ + KL E + Y+ +++ +
Sbjct: 150 QWITALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPELLL 285
H+ +HRDIK N+L+D +G +++ADFG + G + S V T Y +PE+L
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQ 265
Query: 286 GSTD----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
D YG D WS G + EM G + VE +I
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKV-RFDTSEPESVKFMAREIRILQKLDH 168
+ ++ + +G+G + V + ++T +I A+K + +++ + E +L D
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 169 PNVIKLEGLATSRMQYSLYLVFDF-MQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHC 227
+ L + + LYLV D+ + DL ++ + KL E + Y+ +++ +
Sbjct: 134 QWITALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV--TLWYRAPELLL 285
H+ +HRDIK N+L+D +G +++ADFG + G + S V T Y +PE+L
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQ 249
Query: 286 GSTD----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
D YG D WS G + EM G + VE +I
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 110 DSYDKLAKVGQGTYSNVYKAR-----DRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
++ + + +G+G + V++AR + +VA+K ++ + S F RE ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ-REAALMA 105
Query: 165 KLDHPNVIKLEGLATSRMQYSLYLVFDFM---------------------QSDLT--KII 201
+ D+PN++KL G+ + + L+F++M SDL+ +
Sbjct: 106 EFDNPNIVKLLGVCA--VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 202 CRPGQK-LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS-N 259
PG L+ + C +Q+ +G+ + ER +HRD+ N L+ ++ ++KIADFGLS N
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 260 FFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
+ + + + + PE + Y D+W+ G +L E+F
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIF 270
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 134/333 (40%), Gaps = 67/333 (20%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+ K+G GT+ V + D K A+K VR S K A ++ +Q D N +
Sbjct: 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIV 99
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQK-LTEPQVKCYMQQLLSGLQHCHERGIL 233
+ + L+F+ + L +II R +K Y ++L L + + +
Sbjct: 100 KYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLT 159
Query: 234 HRDIKASNLLID-------------------------KSGMLKIADFGLSNFFIPKQKGP 268
H D+K N+L+D KS +K+ DFG + F +
Sbjct: 160 HTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF----KSDY 215
Query: 269 LTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQL------ 322
S + T YRAPE++L + + V D+WS GC+LAE++ G L +E L
Sbjct: 216 HGSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESI 274
Query: 323 ------HRIFKLCGTPSEDYWKKMKLTTTFRPQH----------------YKPSFREVFG 360
+ +++ T Y K +L + P++ YK E+F
Sbjct: 275 IQPIPKNMLYEATKTNGSKYVNKDELKLAW-PENASSINSIKHVKKCLPLYKIIKHELFC 333
Query: 361 EFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
+F L ++L +DP R + A L+++F
Sbjct: 334 DF-------LYSILQIDPTLRPSPAELLKHKFL 359
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G + V+ + K VA+K +R E E ++ KL HP +++L G
Sbjct: 15 EIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQLYG 70
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYM-QQLLSGLQHCHERGILHR 235
+ Q + LV +FM+ R + L + M + G+ + E ++HR
Sbjct: 71 VCLE--QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 128
Query: 236 DIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGID 295
D+ A N L+ ++ ++K++DFG++ F + Q T + + +PE + + Y D
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSD 187
Query: 296 LWSAGCLLAEMF 307
+WS G L+ E+F
Sbjct: 188 VWSFGVLMWEVF 199
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 41/295 (13%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRIL-QKLDHPNVIKLEG 176
+G+G Y+ V A GK A+K + S F RE+ L Q + N+++L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF--REVETLYQCQGNKNILELIE 78
Query: 177 LATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRD 236
++ YLVF+ +Q + + E + ++ + + L H +GI HRD
Sbjct: 79 FFEDDTRF--YLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRD 136
Query: 237 IKASNLLI---DKSGMLKIADFG------LSNFFIPKQKGPLTSRVVTLWYRAPELLLGS 287
+K N+L +K +KI DF L+N P LT+ + Y APE++
Sbjct: 137 LKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVF 196
Query: 288 TD----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMKLT 343
TD Y DLWS G +L M G P G + CG W + ++
Sbjct: 197 TDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD--------CG------WDRGEVC 242
Query: 344 TTFRPQHYKPSFREVFGEFPPSSYG--------ILTTLLALDPAYRGTAASALQN 390
+ + ++ S +E EFP + +++ LL D R +AA LQ+
Sbjct: 243 RVCQNKLFE-SIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
Y + K+G+G +S V G ALK++ E + + RE + + +HPN+
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRIL--CHEQQDREEAQREADMHRLFNHPNI 88
Query: 172 IKLEG--LATSRMQYSLYLVFDFMQ-SDLTKIICR---PGQKLTEPQVKCYMQQLLSGLQ 225
++L L ++ +L+ F + L I R G LTE Q+ + + GL+
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSN---FFIPKQKGPLT-----SRVVTLW 277
H +G HRD+K +N+L+ G + D G N + + LT ++ T+
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 278 YRAPELLLGSTDYGVG--IDLWSAGCLLAEMFIG 309
YRAPEL + + D+WS GC+L M G
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 118 VGQGTYSNVY------KARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNV 171
+G+G + VY +A++R I +L ++ +E + V+ RE +++ L+HPNV
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI----TEMQQVEAFLREGLLMRGLNHPNV 84
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
+ L G+ L+ DL + I P + T + + Q+ G+++ E+
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT----SRVVTLWYRAPELLLGS 287
+HRD+ A N ++D+S +K+ADFGL+ + ++ + +R+ W L +
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES--LQT 202
Query: 288 TDYGVGIDLWSAGCLLAEMF 307
+ D+WS G LL E+
Sbjct: 203 YRFTTKSDVWSFGVLLWELL 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E E +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-EDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 53/328 (16%)
Query: 110 DSYDKLAKVGQGTYSNVYKARD-RDTGKIVALKKVRFDTSEPESVKFMAR-EIRILQKLD 167
+ Y+ ++ +G+GT+ V + D R G VALK ++ E K AR EI +L+K++
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIK----NVEKYKEAARLEINVLEKIN 88
Query: 168 H--PNVIKLEGLATSRMQYSLYLVFDFMQSDLTKI-ICRPGQKLTEP--QVKCYMQQLLS 222
P+ L Y ++ F L+ + L P QV+ QL
Sbjct: 89 EKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQ 148
Query: 223 GLQHCHERGILHRDIKASNLLID-------------------KSGMLKIADFGLSNFFIP 263
++ H+ + H D+K N+L KS +++ DFG + F
Sbjct: 149 AVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF--- 205
Query: 264 KQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLH 323
++ V T YRAPE++L + D+WS GC++ E ++G L E L
Sbjct: 206 -DHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 324 RIFKLCG---------TPSEDY-------WKKMKLTTTFRPQHYKPSFREVFGEFPPSS- 366
+ ++ G T + Y W + + ++ KP R + E
Sbjct: 264 MMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQ 323
Query: 367 -YGILTTLLALDPAYRGTAASALQNEFF 393
+ ++ ++L +PA R T ALQ+ FF
Sbjct: 324 LFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 118 VGQGTYSNVYKARDRDTG--KIVALKKVRFDTSEPESVKFMAREIRILQKL-DHPNVIKL 174
+G+G + V KAR + G A+K+++ S+ + F A E+ +L KL HPN+I L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF-AGELEVLCKLGHHPNIINL 91
Query: 175 EGLATSRMQYSLYL-------VFDFMQSDLT-------KIICRPGQKLTEPQVKCYMQQL 220
G R L + + DF++ I L+ Q+ + +
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 221 LSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---NFFIPKQKGPLTSRVVTLW 277
G+ + ++ +HRD+ A N+L+ ++ + KIADFGLS ++ K G L R
Sbjct: 152 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR----- 206
Query: 278 YRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ A E L S Y D+WS G LL E+
Sbjct: 207 WMAIESLNYSV-YTTNSDVWSYGVLLWEI 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 118 VGQGTYSNVYKARDRDTG--KIVALKKVRFDTSEPESVKFMAREIRILQKL-DHPNVIKL 174
+G+G + V KAR + G A+K+++ S+ + F A E+ +L KL HPN+I L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF-AGELEVLCKLGHHPNIINL 81
Query: 175 EGLATSRMQYSLYL-------VFDFMQSDLT-------KIICRPGQKLTEPQVKCYMQQL 220
G R L + + DF++ I L+ Q+ + +
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 221 LSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---NFFIPKQKGPLTSRVVTLW 277
G+ + ++ +HRD+ A N+L+ ++ + KIADFGLS ++ K G L R
Sbjct: 142 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR----- 196
Query: 278 YRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ A E L S Y D+WS G LL E+
Sbjct: 197 WMAIESLNYSV-YTTNSDVWSYGVLLWEI 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 119 GQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGL 177
GQ ++ + T + VA+K ++ + E M+ E++IL + H NV+ L G
Sbjct: 41 GQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG- 98
Query: 178 ATSRMQYSLYLVFDFMQSDLTKIICRPGQK------------LTEPQVKCYMQQLLSGLQ 225
A ++ L ++ +F + R + LT + CY Q+ G++
Sbjct: 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGME 158
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTSRVVTLWYRAPEL 283
R +HRD+ A N+L+ + ++KI DFGL+ + P +R+ W APE
Sbjct: 159 FLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APET 217
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQLHRIFKLCGTPSEDYWKKMK 341
+ Y + D+WS G LL E+F +G PG + + E R+ + + DY
Sbjct: 218 IFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 276
Query: 342 LTTTFRPQHYKPSFREVFGEF 362
T H +PS R F E
Sbjct: 277 YQTMLDCWHGEPSQRPTFSEL 297
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 12/221 (5%)
Query: 115 LAKVGQGTYSNVYKAR-DRDTGKIV--ALKKVRFDT-SEPESVKFMAREIRILQKLDHPN 170
L K+G G++ V + D +GK V A+K ++ D S+PE++ RE+ + LDH N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 171 VIKLEGLA-TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+I+L G+ T M+ L + S L ++ G L + Y Q+ G+ +
Sbjct: 83 LIRLYGVVLTPPMKMVTELAP--LGSLLDRLRKHQGHFLLG-TLSRYAVQVAEGMGYLES 139
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTS--RVVTLWYRAPELLLGS 287
+ +HRD+ A NLL+ ++KI DFGL + R V + APE L
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 288 TDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTEVEQLHRIFK 327
T + D W G L EMF G+ G + LH+I K
Sbjct: 200 T-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 115 LAKVGQGTYSNVYKAR-DRDTGKIV--ALKKVRFDT-SEPESVKFMAREIRILQKLDHPN 170
L K+G G++ V + D +GK V A+K ++ D S+PE++ RE+ + LDH N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 171 VIKLEGLA-TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+I+L G+ T M+ L + S L ++ G L + Y Q+ G+ +
Sbjct: 77 LIRLYGVVLTPPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLES 133
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT---SRVVTLWYRAPELLLG 286
+ +HRD+ A NLL+ ++KI DFGL +P+ R V + APE L
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 287 STDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTEVEQLHRIFK 327
T + D W G L EMF G+ G + LH+I K
Sbjct: 193 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDYYKNTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 115 LAKVGQGTYSNVYKAR-DRDTGKIV--ALKKVRFDT-SEPESVKFMAREIRILQKLDHPN 170
L K+G G++ V + D +GK V A+K ++ D S+PE++ RE+ + LDH N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 171 VIKLEGLA-TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+I+L G+ T M+ L + S L ++ G L + Y Q+ G+ +
Sbjct: 83 LIRLYGVVLTPPMKMVTELAP--LGSLLDRLRKHQGHFLLG-TLSRYAVQVAEGMGYLES 139
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT---SRVVTLWYRAPELLLG 286
+ +HRD+ A NLL+ ++KI DFGL +P+ R V + APE L
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 287 STDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTEVEQLHRIFK 327
T + D W G L EMF G+ G + LH+I K
Sbjct: 199 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEXSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDXXKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDXXKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 94 DNIPKEVLAGLVPKSADSYD------KLAK-VGQGTYSNVYKAR-----DRDTGKIVALK 141
D +P + +P A ++ KL K +G+G + V +A T + VA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 142 KVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI 200
++ + E M+ E++IL + H NV+ L G A ++ L ++ +F +
Sbjct: 64 MLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 121
Query: 201 ICRPGQK----------------LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLI 244
R + LT + CY Q+ G++ R +HRD+ A N+L+
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 181
Query: 245 DKSGMLKIADFGLSN--FFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCL 302
+ ++KI DFGL+ + P +R+ W APE + Y + D+WS G L
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVL 239
Query: 303 LAEMF-IGRPLMPG-RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFG 360
L E+F +G PG + + E R+ + + DY T H +PS R F
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
Query: 361 EF 362
E
Sbjct: 300 EL 301
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 115 LAKVGQGTYSNVYKAR-DRDTGKIV--ALKKVRFDT-SEPESVKFMAREIRILQKLDHPN 170
L K+G G++ V + D +GK V A+K ++ D S+PE++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 171 VIKLEGLA-TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+I+L G+ T M+ L + S L ++ G L + Y Q+ G+ +
Sbjct: 73 LIRLYGVVLTPPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLES 129
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT---SRVVTLWYRAPELLLG 286
+ +HRD+ A NLL+ ++KI DFGL +P+ R V + APE L
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 287 STDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTEVEQLHRIFK 327
T + D W G L EMF G+ G + LH+I K
Sbjct: 189 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 94 DNIPKEVLAGLVPKSADSYD------KLAK-VGQGTYSNVYKAR-----DRDTGKIVALK 141
D +P + +P A ++ KL K +G+G + V +A T + VA+K
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 65
Query: 142 KVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI 200
++ + E M+ E++IL + H NV+ L G A ++ L ++ +F +
Sbjct: 66 MLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 123
Query: 201 ICRPGQK----------------LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLI 244
R + LT + CY Q+ G++ R +HRD+ A N+L+
Sbjct: 124 YLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 183
Query: 245 DKSGMLKIADFGLSN--FFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCL 302
+ ++KI DFGL+ + P +R+ W APE + Y + D+WS G L
Sbjct: 184 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVL 241
Query: 303 LAEMF-IGRPLMPG-RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFG 360
L E+F +G PG + + E R+ + + DY T H +PS R F
Sbjct: 242 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 301
Query: 361 EF 362
E
Sbjct: 302 EL 303
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 115 LAKVGQGTYSNVYKAR-DRDTGKIV--ALKKVRFDT-SEPESVKFMAREIRILQKLDHPN 170
L K+G G++ V + D +GK V A+K ++ D S+PE++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 171 VIKLEGLA-TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+I+L G+ T M+ L + S L ++ G L + Y Q+ G+ +
Sbjct: 73 LIRLYGVVLTPPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLES 129
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT---SRVVTLWYRAPELLLG 286
+ +HRD+ A NLL+ ++KI DFGL +P+ R V + APE L
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 287 STDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTEVEQLHRIFK 327
T + D W G L EMF G+ G + LH+I K
Sbjct: 189 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 22/245 (8%)
Query: 109 ADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL-D 167
D Y+ +G G+YS + + T A+K + +P EI IL +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDP------TEEIEILLRYGQ 74
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQS-DLTKIICRPGQKL-TEPQVKCYMQQLLSGLQ 225
HPN+I L+ + +Y+V + + +L I R QK +E + + + ++
Sbjct: 75 HPNIITLKDVYDDGKY--VYVVTELXKGGELLDKILR--QKFFSEREASAVLFTITKTVE 130
Query: 226 HCHERGILHRDIKASNLL-IDKSG---MLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAP 281
+ H +G++HRD+K SN+L +D+SG ++I DFG + + + G L + T + AP
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLXTPCYTANFVAP 189
Query: 282 ELLLGSTDYGVGIDLWSAGCLLAEMFIG-RPLM--PGRTEVEQLHRIFKLCGTPSEDYWK 338
E +L Y D+WS G LL G P P T E L RI + S YW
Sbjct: 190 E-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWN 248
Query: 339 KMKLT 343
+ T
Sbjct: 249 SVSDT 253
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 94 DNIPKEVLAGLVPKSADSYD------KLAK-VGQGTYSNVYKAR-----DRDTGKIVALK 141
D +P + +P A ++ KL K +G+G + V +A T + VA+K
Sbjct: 41 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 100
Query: 142 KVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI 200
++ + E M+ E++IL + H NV+ L G A ++ L ++ +F +
Sbjct: 101 MLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 158
Query: 201 ICRPGQK----------------LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLI 244
R + LT + CY Q+ G++ R +HRD+ A N+L+
Sbjct: 159 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 218
Query: 245 DKSGMLKIADFGLSN--FFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCL 302
+ ++KI DFGL+ + P +R+ W APE + Y + D+WS G L
Sbjct: 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVL 276
Query: 303 LAEMF-IGRPLMPG-RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFG 360
L E+F +G PG + + E R+ + + DY T H +PS R F
Sbjct: 277 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 336
Query: 361 EF 362
E
Sbjct: 337 EL 338
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 94 DNIPKEVLAGLVPKSADSYD------KLAK-VGQGTYSNVYKAR-----DRDTGKIVALK 141
D +P + +P A ++ KL K +G+G + V +A T + VA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 142 KVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI 200
++ + E M+ E++IL + H NV+ L G A ++ L ++ +F +
Sbjct: 64 MLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 121
Query: 201 ICRPGQK----------------LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLI 244
R + LT + CY Q+ G++ R +HRD+ A N+L+
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 181
Query: 245 DKSGMLKIADFGLSN--FFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCL 302
+ ++KI DFGL+ + P +R+ W APE + Y + D+WS G L
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVL 239
Query: 303 LAEMF-IGRPLMPG-RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFG 360
L E+F +G PG + + E R+ + + DY T H +PS R F
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
Query: 361 EF 362
E
Sbjct: 300 EL 301
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 115 LAKVGQGTYSNVYKAR-DRDTGKIV--ALKKVRFDT-SEPESVKFMAREIRILQKLDHPN 170
L K+G G++ V + D +GK V A+K ++ D S+PE++ RE+ + LDH N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 171 VIKLEGLA-TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+I+L G+ T M+ L + S L ++ G L + Y Q+ G+ +
Sbjct: 77 LIRLYGVVLTPPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLES 133
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT---SRVVTLWYRAPELLLG 286
+ +HRD+ A NLL+ ++KI DFGL +P+ R V + APE L
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 287 STDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTEVEQLHRIFK 327
T + D W G L EMF G+ G + LH+I K
Sbjct: 193 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 128/302 (42%), Gaps = 37/302 (12%)
Query: 94 DNIPKEVLAGLVPKSADSYD------KLAK-VGQGTYSNVYKAR-----DRDTGKIVALK 141
D +P + +P A ++ KL K +G+G + V +A T + VA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 142 KVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI 200
++ + E M+ E++IL + H NV+ L G A ++ L ++ +F +
Sbjct: 64 MLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 121
Query: 201 ICRPGQK----------------LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLI 244
R + LT + CY Q+ G++ R +HRD+ A N+L+
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 181
Query: 245 DKSGMLKIADFGLSNFFI--PKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCL 302
+ ++KI DFGL+ P +R+ W APE + Y + D+WS G L
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVL 239
Query: 303 LAEMF-IGRPLMPG-RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFG 360
L E+F +G PG + + E R+ + + DY T H +PS R F
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
Query: 361 EF 362
E
Sbjct: 300 EL 301
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 115 LAKVGQGTYSNVYKAR-DRDTGKIV--ALKKVRFDT-SEPESVKFMAREIRILQKLDHPN 170
L K+G G++ V + D +GK V A+K ++ D S+PE++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 171 VIKLEGLA-TSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
+I+L G+ T M+ L + S L ++ G L + Y Q+ G+ +
Sbjct: 73 LIRLYGVVLTPPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLES 129
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLT---SRVVTLWYRAPELLLG 286
+ +HRD+ A NLL+ ++KI DFGL +P+ R V + APE L
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 287 STDYGVGIDLWSAGCLLAEMFI-GRPLMPGRTEVEQLHRIFK 327
T + D W G L EMF G+ G + LH+I K
Sbjct: 189 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 22/200 (11%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
VG+G + V KA+ R K VA+K++ SE E F+ E+R L +++HPN++KL G
Sbjct: 17 VGRGAFGVVCKAKWR--AKDVAIKQIE---SESERKAFIV-ELRQLSRVNHPNIVKLYGA 70
Query: 178 ATSRMQYSLYLVFDFMQ-SDLTKII--CRPGQKLTEPQVKCYMQQLLSGLQHCHE---RG 231
+ + LV ++ + L ++ P T + Q G+ + H +
Sbjct: 71 CLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 232 ILHRDIKASNLLIDKSG-MLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
++HRD+K NLL+ G +LKI DFG + + +T+ + + APE+ GS +Y
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGS-NY 181
Query: 291 GVGIDLWSAGCLLAEMFIGR 310
D++S G +L E+ R
Sbjct: 182 SEKCDVFSWGIILWEVITRR 201
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 22/200 (11%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGL 177
VG+G + V KA+ R K VA+K++ SE E F+ E+R L +++HPN++KL G
Sbjct: 16 VGRGAFGVVCKAKWR--AKDVAIKQIE---SESERKAFIV-ELRQLSRVNHPNIVKLYGA 69
Query: 178 ATSRMQYSLYLVFDFMQ-SDLTKII--CRPGQKLTEPQVKCYMQQLLSGLQHCHE---RG 231
+ + LV ++ + L ++ P T + Q G+ + H +
Sbjct: 70 CLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 232 ILHRDIKASNLLIDKSG-MLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
++HRD+K NLL+ G +LKI DFG + + +T+ + + APE+ GS +Y
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGS-NY 180
Query: 291 GVGIDLWSAGCLLAEMFIGR 310
D++S G +L E+ R
Sbjct: 181 SEKCDVFSWGIILWEVITRR 200
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 15 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 73
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 74 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 131
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 132 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 192 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 249
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 250 -IPVEELFKLLK 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 42/255 (16%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 74 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 132
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQS------------------- 195
+ E+ +++ + H N+I L G T LY++ ++
Sbjct: 133 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 190
Query: 196 DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADF 255
D+ ++ P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADF
Sbjct: 191 DINRV---PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 247
Query: 256 GLSNFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPL 312
GL+ I K R+ W APE L Y D+WS G L+ E+F +G
Sbjct: 248 GLARDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 313 MPGRTEVEQLHRIFK 327
PG VE+L ++ K
Sbjct: 306 YPG-IPVEELFKLLK 319
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 20 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 78
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 79 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 136
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 137 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 197 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 254
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 255 -IPVEELFKLLK 265
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 17 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 75
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 76 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 133
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 134 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 194 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 251
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 252 -IPVEELFKLLK 262
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 118 VGQGTYSNVYKARDRDTG--KIVALKKVRFDTSEPESVKFMAREIRILQKL-DHPNVIKL 174
+G+G + V KAR + G A+K+++ S+ + F A E+ +L KL HPN+I L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF-AGELEVLCKLGHHPNIINL 88
Query: 175 EGLATSRMQYSLYL-------VFDFMQSDLT-------KIICRPGQKLTEPQVKCYMQQL 220
G R L + + DF++ I L+ Q+ + +
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 221 LSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---NFFIPKQKGPLTSRVVTLW 277
G+ + ++ +HR++ A N+L+ ++ + KIADFGLS ++ K G L R
Sbjct: 149 ARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR----- 203
Query: 278 YRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ A E L S Y D+WS G LL E+
Sbjct: 204 WMAIESLNYSV-YTTNSDVWSYGVLLWEI 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 24/264 (9%)
Query: 119 GQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGL 177
GQ ++ + T + VA+K ++ + E M+ E++IL + H NV+ L G
Sbjct: 42 GQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG- 99
Query: 178 ATSRMQYSLYLVFDFMQSDLTKIICRPGQK---------------LTEPQVKCYMQQLLS 222
A ++ L ++ +F + R + LT + CY Q+
Sbjct: 100 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAK 159
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFI--PKQKGPLTSRVVTLWYRA 280
G++ R +HRD+ A N+L+ + ++KI DFGL+ P +R+ W A
Sbjct: 160 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWM-A 218
Query: 281 PELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQLHRIFKLCGTPSEDYWK 338
PE + Y + D+WS G LL E+F +G PG + + E R+ + + DY
Sbjct: 219 PETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 277
Query: 339 KMKLTTTFRPQHYKPSFREVFGEF 362
T H +PS R F E
Sbjct: 278 PEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 87 LVSEMEMMKMIGKHKNIIHLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 114 KLAK-VGQGTYSNVYKAR-----DRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
KL K +G+G + V +A T + VA+K ++ + E M+ E++IL +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-ELKILIHIG 79
Query: 168 HP-NVIKLEGLATS---------------------RMQYSLYLVFDFMQSDLTKIICRPG 205
H NV+ L G T R + + ++ + DL K
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---- 135
Query: 206 QKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIP 263
LT + CY Q+ G++ R +HRD+ A N+L+ + ++KI DFGL+ + P
Sbjct: 136 --LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 264 KQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQ 321
+R+ W APE + Y + D+WS G LL E+F +G PG + + E
Sbjct: 194 DYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 322 LHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + + DY T H +PS R F E
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 114 KLAK-VGQGTYSNVYKAR-----DRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
KL K +G+G + V +A T + VA+K ++ + E M+ E++IL +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-ELKILIHIG 79
Query: 168 HP-NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQK----------------LTE 210
H NV+ L G A ++ L ++ +F + R + LT
Sbjct: 80 HHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 211 PQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFI--PKQKGP 268
+ CY Q+ G++ R +HRD+ A N+L+ + ++KI DFGL+ P
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 269 LTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQLHRIF 326
+R+ W APE + Y + D+WS G LL E+F +G PG + + E R+
Sbjct: 199 GDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 327 KLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
+ + DY T H +PS R F E
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 87 LVSEMEMMKMIGKHKNIITLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 31 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T+ L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 88 YSTAP---QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ + S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDSNP 201
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 114 KLAK-VGQGTYSNVYKAR-----DRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
KL K +G+G + V +A T + VA+K ++ + E M+ E++IL +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-ELKILIHIG 79
Query: 168 HP-NVIKLEGLATS---------------------RMQYSLYLVFDFMQSDLTKIICRPG 205
H NV+ L G T R + + ++ + DL K
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---- 135
Query: 206 QKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIP 263
LT + CY Q+ G++ R +HRD+ A N+L+ + ++KI DFGL+ + P
Sbjct: 136 --LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 264 KQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQ 321
+R+ W APE + Y + D+WS G LL E+F +G PG + + E
Sbjct: 194 DYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 322 LHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + + DY T H +PS R F E
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 41/281 (14%)
Query: 114 KLAK-VGQGTYSNVYKAR-----DRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
KL K +G+G + V +A T + VA+K ++ + E M+ E++IL +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-ELKILIHIG 79
Query: 168 HP-NVIKLEGLATS---------------------RMQYSLYLVFDFMQSDLTKIICRPG 205
H NV+ L G T R + + ++ + DL K
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---- 135
Query: 206 QKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFI--P 263
LT + CY Q+ G++ R +HRD+ A N+L+ + ++KI DFGL+ P
Sbjct: 136 --LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 264 KQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQ 321
+R+ W APE + Y + D+WS G LL E+F +G PG + + E
Sbjct: 194 DXVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 322 LHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + + DY T H +PS R F E
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 31 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 88 YST---KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ + S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDSNP 201
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ ++ + R
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ +++IADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 118 VGQGTYSNVYKARDR-DTGKI---VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIK 173
+G G + VYK + +GK VA+K ++ +E + V F+ E I+ + H N+I+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG-EAGIMGQFSHHNIIR 110
Query: 174 LEGLATSRMQYS-LYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
LEG+ + +Y + ++ ++M++ L K + + + Q+ ++ + +G+++
Sbjct: 111 LEGVIS---KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 232 ILHRDIKASNLLIDKSGMLKIADFGLSNFF--IPKQKGPLTSRVVTLWYRAPELLLGSTD 289
+HRD+ A N+L++ + + K++DFGLS P+ + + + + APE +
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AISYRK 226
Query: 290 YGVGIDLWSAGCLLAEMF 307
+ D+WS G ++ E+
Sbjct: 227 FTSASDVWSFGIVMWEVM 244
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 19 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 76 YST---KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 132
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ + S
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDSNP 189
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ 210
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 172 IKLEGLATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
I+L L S L+ + M+ DL I G L E + + Q+L ++HCH
Sbjct: 76 IRL--LDWFERPDSFVLILERMEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN 132
Query: 230 RGILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
G+LHRDIK N+LID G LK+ DFG + T T Y PE +
Sbjct: 133 CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHR 189
Query: 289 DYGVGIDLWSAGCLLAEMFIG 309
+G +WS G LL +M G
Sbjct: 190 YHGRSAAVWSLGILLYDMVCG 210
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ + + R
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVGYASKGNLREYLRARRPPGMEYSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 36/252 (14%)
Query: 106 PKSADSYDKLA---KVGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKF 155
PK DKL +G+G + V A D+D K VA+K ++ D +E + +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSD 86
Query: 156 MAREIRILQKL-DHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICR----------- 203
+ E+ +++ + H N+I L G T LY++ + + R
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQ--DGPLYVIVAYASKGNLREYLRARRPPGMEYSY 144
Query: 204 -----PGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS 258
P +++T + QL G+++ + +HRD+ A N+L+ ++ ++KIADFGL+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 259 NFF--IPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
I K R+ W APE L Y D+WS G L+ E+F +G PG
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWM-APEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 316 RTEVEQLHRIFK 327
VE+L ++ K
Sbjct: 263 -IPVEELFKLLK 273
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 131/328 (39%), Gaps = 53/328 (16%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKL-- 166
+ Y+ + +G+GT+ V + D GK VALK +R E+ + EI +L+K+
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKE 84
Query: 167 -DHPNVIKLEGLATSRMQYS--LYLVFDFMQSDLTKIICRPG-QKLTEPQVKCYMQQLLS 222
D N L L + + + + F+ + + + + Q P V+ QL
Sbjct: 85 KDKENKF-LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCH 143
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGM-------------------LKIADFGLSNFFIP 263
L+ HE + H D+K N+L S +++ADFG + F
Sbjct: 144 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--- 200
Query: 264 KQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLH 323
T+ V T YR PE++L + D+WS GC+L E + G L E L
Sbjct: 201 -DHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 258
Query: 324 RIFKLCG---------TPSEDY-------WKKMKLTTTFRPQHYKP--SFREVFGEFPPS 365
+ K+ G T + Y W + + ++ KP S+
Sbjct: 259 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 318
Query: 366 SYGILTTLLALDPAYRGTAASALQNEFF 393
+ ++ +L DPA R T A AL + FF
Sbjct: 319 LFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 131/328 (39%), Gaps = 53/328 (16%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKL-- 166
+ Y+ + +G+GT+ V + D GK VALK +R E+ + EI +L+K+
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKE 107
Query: 167 -DHPNVIKLEGLATSRMQYS--LYLVFDFMQSDLTKIICRPG-QKLTEPQVKCYMQQLLS 222
D N L L + + + + F+ + + + + Q P V+ QL
Sbjct: 108 KDKENKF-LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCH 166
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGM-------------------LKIADFGLSNFFIP 263
L+ HE + H D+K N+L S +++ADFG + F
Sbjct: 167 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--- 223
Query: 264 KQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLH 323
T+ V T YR PE++L + D+WS GC+L E + G L E L
Sbjct: 224 -DHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 281
Query: 324 RIFKLCG---------TPSEDY-------WKKMKLTTTFRPQHYKP--SFREVFGEFPPS 365
+ K+ G T + Y W + + ++ KP S+
Sbjct: 282 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 341
Query: 366 SYGILTTLLALDPAYRGTAASALQNEFF 393
+ ++ +L DPA R T A AL + FF
Sbjct: 342 LFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 131/328 (39%), Gaps = 53/328 (16%)
Query: 110 DSYDKLAKVGQGTYSNVYKARDRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKL-- 166
+ Y+ + +G+GT+ V + D GK VALK +R E+ + EI +L+K+
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKE 75
Query: 167 -DHPNVIKLEGLATSRMQYS--LYLVFDFMQSDLTKIICRPG-QKLTEPQVKCYMQQLLS 222
D N L L + + + + F+ + + + + Q P V+ QL
Sbjct: 76 KDKENKF-LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCH 134
Query: 223 GLQHCHERGILHRDIKASNLLIDKSGM-------------------LKIADFGLSNFFIP 263
L+ HE + H D+K N+L S +++ADFG + F
Sbjct: 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--- 191
Query: 264 KQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLH 323
T+ V T YR PE++L + D+WS GC+L E + G L E L
Sbjct: 192 -DHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249
Query: 324 RIFKLCG---------TPSEDY-------WKKMKLTTTFRPQHYKP--SFREVFGEFPPS 365
+ K+ G T + Y W + + ++ KP S+
Sbjct: 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309
Query: 366 SYGILTTLLALDPAYRGTAASALQNEFF 393
+ ++ +L DPA R T A AL + FF
Sbjct: 310 LFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 40/335 (11%)
Query: 93 VDNIPKEVLAGLVPKSADSYDKLAKVGQG--TYSNVYKARDRDTGKIVALKKVRFDTSEP 150
++N+ + ++ +P+ Y+ L +G+G V AR + TG+ V ++++ +
Sbjct: 9 MENLYFQGMSSFLPEGG-CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN 67
Query: 151 ESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTK-IICRPGQK-L 208
E V F+ E+ + + +HPN++ AT L++V FM K +IC +
Sbjct: 68 EMVTFLQGELHVSKLFNHPNIVPYR--ATFIADNELWVVTSFMAYGSAKDLICTHFMDGM 125
Query: 209 TEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKG- 267
E + +Q +L L + H G +HR +KAS++LI G + ++ GL + G
Sbjct: 126 NELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQ 183
Query: 268 --------PLTSRVVTLWYRAPELLLGSTD-YGVGIDLWSAG---CLLAEMFIGRPLMPG 315
P S V W +PE+L + Y D++S G C LA + MP
Sbjct: 184 RQRVVHDFPKYSVKVLPWL-SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242
Query: 316 -RTEVEQLHR----IFKLCGTPSEDY------------WKKMKLTTTFRPQHYKPSFREV 358
+ +E+L+ + P+E+ T+T RP +
Sbjct: 243 TQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPY 302
Query: 359 FGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
F P + + L +P R +A++ L + FF
Sbjct: 303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 337
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 118 VGQGTYSNVYKARDRDTGKI-----VALK--KVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G G + V A K VA+K K + D+SE E+ + E++++ +L H
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREA---LMSELKMMTQLGSHE 109
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVK-------------- 214
N++ L G T + +YL+F++ DL + +K +E +++
Sbjct: 110 NIVNLLGACT--LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 215 --------CYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK 266
C+ Q+ G++ + +HRD+ A N+L+ ++KI DFGL+ +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 267 GPL--TSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG 315
+ +R+ W APE L Y + D+WS G LL E+F +G PG
Sbjct: 228 YVVRGNARLPVKW-MAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 116 AKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLE 175
++G G++ VYK + VA+K ++ PE + E+ +L+K H N++
Sbjct: 42 TRIGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 176 GLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
G T +L +V + + S L K + K Q+ +Q G+ + H + I+H
Sbjct: 99 GYMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV-----VTLWYRAPEL--LLGS 287
RD+K++N+ + + +KI DFGL+ K + + +V LW APE+ + +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATV---KSRWSGSQQVEQPTGSVLWM-APEVIRMQDN 211
Query: 288 TDYGVGIDLWSAGCLLAEMFIG 309
+ D++S G +L E+ G
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTG 233
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 95
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 96 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE-SLQTQKF 213
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 131/316 (41%), Gaps = 39/316 (12%)
Query: 112 YDKLAKVGQG--TYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
Y+ L +G+G V AR + TG+ V ++++ + E V F+ E+ + + +HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTK-IICRPGQK-LTEPQVKCYMQQLLSGLQHC 227
N++ AT L++V FM K +IC + E + +Q +L L +
Sbjct: 71 NIVPYR--ATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 128
Query: 228 HERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKG---------PLTSRVVTLWY 278
H G +HR +KAS++LI G + ++ GL + G P S V W
Sbjct: 129 HHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 186
Query: 279 RAPELLLGSTD-YGVGIDLWSAG---CLLAEMFIGRPLMPG-RTEVEQLHR----IFKLC 329
+PE+L + Y D++S G C LA + MP + +E+L+ +
Sbjct: 187 -SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 245
Query: 330 GTPSEDY------------WKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALD 377
P+E+ T+T RP + F P + + L +
Sbjct: 246 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 305
Query: 378 PAYRGTAASALQNEFF 393
P R +A++ L + FF
Sbjct: 306 PDARPSASTLLNHSFF 321
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 150
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 124/290 (42%), Gaps = 58/290 (20%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRF----DTSEPESVKFMAREIRILQKL-DHPNVI 172
+G G + V +A GK A+ KV T+ + + + E++I+ L H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 173 KLEGLATSR------MQYSLYL-VFDFM----QSDLTKIICRPGQKLTEPQVKCYMQQLL 221
L G T +Y Y + +F+ ++DL K RP L + + Q+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP---LELRDLLHFSSQVA 162
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGL-------SNFFIPKQKGPLTSRVV 274
G+ + +HRD+ A N+L+ + KI DFGL SN+ + KG +R+
Sbjct: 163 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV---KG--NARLP 217
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFKLCGTPS 333
W APE + Y V D+WS G LL E+F +G PG + +++ K
Sbjct: 218 VKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK------ 269
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGT 383
+ Y Q +P+F P + Y I+ AL+P +R T
Sbjct: 270 DGY------------QMAQPAFA------PKNIYSIMQACWALEPTHRPT 301
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLDHPNVIK 173
L ++G G + V + R VA+K ++ + SE E ++ E +++ L H +++
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQ 83
Query: 174 LEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ T Q ++++ ++M + L + + Q+ + + +++ +
Sbjct: 84 LYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
LHRD+ A N L++ G++K++DFGLS + + ++ + + PE+L+ S +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK-FSS 200
Query: 293 GIDLWSAGCLLAEMF 307
D+W+ G L+ E++
Sbjct: 201 KSDIWAFGVLMWEIY 215
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 150
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 149
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 207 GRSAAVWSLGILLYDMVCG 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 150
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 149
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 207 GRSAAVWSLGILLYDMVCG 225
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
++D++ +G+G + VYK R D G +VA+K+++ + + ++F E+ ++
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQFQT-EVEMISMAV 93
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLS----- 222
H N+++L G + + LV+ +M ++ + C + ++P + +Q ++
Sbjct: 94 HRNLLRLRGFCMTPTER--LLVYPYM-ANGSVASCLRERPESQPPLDWPKRQRIALGSAR 150
Query: 223 GLQHCHER---GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYR 279
GL + H+ I+HRD+KA+N+L+D+ + DFGL+ K + T+ +
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHI 210
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMFIGR 310
APE L + D++ G +L E+ G+
Sbjct: 211 APE-YLSTGKSSEKTDVFGYGVMLLELITGQ 240
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 97
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G++ + +
Sbjct: 98 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ + K+ + ++ + + + A E L + +
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE-SLQTQKF 215
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 169
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 226
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 227 GRSAAVWSLGILLYDMVCG 245
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 105 VPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
+ ++ +++D +G G + VYK RD K VALK+ PES + + ++
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKR-----RTPESSQGIEEFETEIE 87
Query: 165 KLD---HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
L HP+++ L G R + + L++ +M++ K R P + +Q L
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNE--MILIYKYMENGNLK---RHLYGSDLPTMSMSWEQRL 142
Query: 222 S-------GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV 274
GL + H R I+HRD+K+ N+L+D++ + KI DFG+S + L V
Sbjct: 143 EICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 275 -TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGR 310
TL Y PE + D++S G +L E+ R
Sbjct: 203 GTLGYIDPEYFIKGR-LTEKSDVYSFGVVLFEVLCAR 238
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 135
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNXG 130
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 158 REIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQV---K 214
+E + + KL HP ++K G+ + +Y +Y+V +++ + R K EP
Sbjct: 52 QEAQTMMKLSHPKLVKFYGVCSK--EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM 109
Query: 215 CYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV 274
CY + G+ +HRD+ A N L+D+ +K++DFG++ + + Q
Sbjct: 110 CY--DVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF 167
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGR--------TEVEQLHRI 325
+ + APE + Y D+W+ G L+ E+F +G+ MP +V Q HR+
Sbjct: 168 PVKWSAPE-VFHYFKYSSKSDVWAFGILMWEVFSLGK--MPYDLYTNSEVVLKVSQGHRL 224
Query: 326 FK 327
++
Sbjct: 225 YR 226
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 124/290 (42%), Gaps = 58/290 (20%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRF----DTSEPESVKFMAREIRILQKL-DHPNVI 172
+G G + V +A GK A+ KV T+ + + + E++I+ L H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 173 KLEGLATSR------MQYSLYL-VFDFM----QSDLTKIICRPGQKLTEPQVKCYMQQLL 221
L G T +Y Y + +F+ ++DL K RP L + + Q+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP---LELRDLLHFSSQVA 170
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGL-------SNFFIPKQKGPLTSRVV 274
G+ + +HRD+ A N+L+ + KI DFGL SN+ + KG +R+
Sbjct: 171 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV---KG--NARLP 225
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFKLCGTPS 333
W APE + Y V D+WS G LL E+F +G PG + +++ K
Sbjct: 226 VKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK------ 277
Query: 334 EDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGT 383
+ Y Q +P+F P + Y I+ AL+P +R T
Sbjct: 278 DGY------------QMAQPAFA------PKNIYSIMQACWALEPTHRPT 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 44/224 (19%)
Query: 118 VGQGTYSNVYKA-----RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVI 172
+G+G + V KA + R VA+K ++ + + P ++ + E +L++++HP+VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 173 KLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQK------------------------L 208
KL G + L L+ ++ + + R +K L
Sbjct: 90 KLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 209 TEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS------NFFI 262
T + + Q+ G+Q+ E ++HRD+ A N+L+ + +KI+DFGLS + ++
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 263 PKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ +G R+ W L Y D+WS G LL E+
Sbjct: 208 KRSQG----RIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEI 245
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 163
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 182
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 239
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 240 GRSAAVWSLGILLYDMVCG 258
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 177
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 134
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 192 GRSAAVWSLGILLYDMVCG 210
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 163
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 162
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 162
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 163
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 163
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 135
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 162
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 162
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 135
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 177
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 94
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 95 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 212
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 95
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 96 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 213
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 91
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 92 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 209
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 88
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 89 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 206
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 207 TTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 214
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 114
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 115 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 232
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 233 TTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 214
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 115
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 116 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 233
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 234 TTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 93
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G+++ + +
Sbjct: 94 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 211
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 20/262 (7%)
Query: 114 KLAKVGQGTYSNVYKAR---DRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
KL +G G + V+K + ++ KI KV D S +S + + + + LDH +
Sbjct: 35 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC-YMQQLLSGLQHCHE 229
+++L GL SL LV ++ R + PQ+ + Q+ G+ + E
Sbjct: 95 IVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVT--LWYRAPELLLG- 286
G++HR++ A N+L+ +++ADFG+++ P K L S T W + G
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 287 ----STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIF--KLCGTPSEDYWKKM 340
S + G+ +W AE + G L +E+ R+ ++C + D + M
Sbjct: 212 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQIC---TIDVYMVM 268
Query: 341 KLTTTFRPQHYKPSFREVFGEF 362
+ ++ +P+F+E+ EF
Sbjct: 269 -VKCWMIDENIRPTFKELANEF 289
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 157
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 214
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 215 GRSAAVWSLGILLYDMVCG 233
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 105 VPKSADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQ 164
+ ++ +++D +G G + VYK RD K VALK+ PES + + ++
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKR-----RTPESSQGIEEFETEIE 87
Query: 165 KLD---HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
L HP+++ L G R + + L++ +M++ K R P + +Q L
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNE--MILIYKYMENGNLK---RHLYGSDLPTMSMSWEQRL 142
Query: 222 S-------GLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVV 274
GL + H R I+HRD+K+ N+L+D++ + KI DFG+S + L V
Sbjct: 143 EICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK 202
Query: 275 -TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGR 310
TL Y PE + D++S G +L E+ R
Sbjct: 203 GTLGYIDPEYFIKGR-LTEKSDVYSFGVVLFEVLCAR 238
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 155
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G++ + +
Sbjct: 156 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE-SLQTQKF 273
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLDHPNVIK 173
L ++G G + V + R VA+K ++ + SE E ++ E +++ L H +++
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQ 83
Query: 174 LEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ T Q ++++ ++M + L + + Q+ + + +++ +
Sbjct: 84 LYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
LHRD+ A N L++ G++K++DFGLS + + + + + PE+L+ S +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSS 200
Query: 293 GIDLWSAGCLLAEMF 307
D+W+ G L+ E++
Sbjct: 201 KSDIWAFGVLMWEIY 215
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 133
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 190
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 191 GRSAAVWSLGILLYDMVCG 209
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 130
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 20/262 (7%)
Query: 114 KLAKVGQGTYSNVYKAR---DRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPN 170
KL +G G + V+K + ++ KI KV D S +S + + + + LDH +
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 171 VIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKC-YMQQLLSGLQHCHE 229
+++L GL SL LV ++ R + PQ+ + Q+ G+ + E
Sbjct: 77 IVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 230 RGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVT--LWYRAPELLLG- 286
G++HR++ A N+L+ +++ADFG+++ P K L S T W + G
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 287 ----STDYGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIF--KLCGTPSEDYWKKM 340
S + G+ +W AE + G L +E+ R+ ++C + D + M
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQIC---TIDVYMVM 250
Query: 341 KLTTTFRPQHYKPSFREVFGEF 362
+ ++ +P+F+E+ EF
Sbjct: 251 -VKCWMIDENIRPTFKELANEF 271
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLDHPNVIK 173
L ++G G + V + R VA+K ++ + SE E ++ E +++ L H +++
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQ 74
Query: 174 LEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ T Q ++++ ++M + L + + Q+ + + +++ +
Sbjct: 75 LYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 132
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
LHRD+ A N L++ G++K++DFGLS + + + + + PE+L+ S +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSS 191
Query: 293 GIDLWSAGCLLAEMF 307
D+W+ G L+ E++
Sbjct: 192 KSDIWAFGVLMWEIY 206
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLDHPNVIK 173
L ++G G + V + R VA+K ++ + SE E ++ E +++ L H +++
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQ 67
Query: 174 LEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ T Q ++++ ++M + L + + Q+ + + +++ +
Sbjct: 68 LYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 125
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
LHRD+ A N L++ G++K++DFGLS + + + + + PE+L+ S +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSS 184
Query: 293 GIDLWSAGCLLAEMF 307
D+W+ G L+ E++
Sbjct: 185 KSDIWAFGVLMWEIY 199
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 94
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII---------------CRPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + P ++L+ +
Sbjct: 95 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 213 RLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVR----FDTSEPESVKFMAREIRILQKLD--HPNV 171
+G G + +VY VA+K V D E + + E+ +L+K+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 172 IKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
I+L + L L DL I G L E + + Q+L ++HCH G
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG 130
Query: 232 ILHRDIKASNLLID-KSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+LHRDIK N+LID G LK+ DFG + T T Y PE + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 291 GVGIDLWSAGCLLAEMFIG 309
G +WS G LL +M G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE-SLQTQKF 214
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 94
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII----------C-----RPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + C P ++L+ +
Sbjct: 95 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 213 RLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 79
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII----------C-----RPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + C P ++L+ +
Sbjct: 80 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 198 RLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 251
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLDHPNVIK 173
L ++G G + V + R VA+K ++ + SE E ++ E +++ L H +++
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQ 63
Query: 174 LEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ T Q ++++ ++M + L + + Q+ + + +++ +
Sbjct: 64 LYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 121
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
LHRD+ A N L++ G++K++DFGLS + + + + + PE+L+ S +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSS 180
Query: 293 GIDLWSAGCLLAEMF 307
D+W+ G L+ E++
Sbjct: 181 KSDIWAFGVLMWEIY 195
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLDHPNVIK 173
L ++G G + V + R VA+K ++ + SE E ++ E +++ L H +++
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQ 68
Query: 174 LEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ T Q ++++ ++M + L + + Q+ + + +++ +
Sbjct: 69 LYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
LHRD+ A N L++ G++K++DFGLS + + + + + PE+L+ S +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSS 185
Query: 293 GIDLWSAGCLLAEMF 307
D+W+ G L+ E++
Sbjct: 186 KSDIWAFGVLMWEIY 200
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 97
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G++ + +
Sbjct: 98 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE-SLQTQKF 215
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 35/300 (11%)
Query: 94 DNIPKEVLAGLVPKSADSYD------KLAK-VGQGTYSNVYKAR-----DRDTGKIVALK 141
D +P + +P A ++ KL K +G+G + V +A T + VA+K
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 65
Query: 142 KVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGLATSRMQYSLYLVFDFMQSDLTKI 200
++ + E M+ E++IL + H NV+ L G A ++ L ++ +F +
Sbjct: 66 MLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 123
Query: 201 ICRPGQK--------------LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK 246
R + LT + Y Q+ G++ R +HRD+ A N+L+ +
Sbjct: 124 YLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSE 183
Query: 247 SGMLKIADFGLSNFFI--PKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLA 304
++KI DFGL+ P +R+ W APE + Y + D+WS G LL
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLW 241
Query: 305 EMF-IGRPLMPG-RTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
E+F +G PG + + E R+ + + DY T H +PS R F E
Sbjct: 242 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE-SLQTQKF 214
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 208 LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQ 265
LT + CY Q+ G++ R +HRD+ A N+L+ + ++KI DFGL+ + P
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 266 KGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQLH 323
+R+ W APE + Y + D+WS G LL E+F +G PG + + E
Sbjct: 255 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 312
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + + DY T H +PS R F E
Sbjct: 313 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 351
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 83
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII---------------CRPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + P ++L+ +
Sbjct: 84 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 202 RLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 255
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 101
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G++ + +
Sbjct: 102 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 160
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE-SLQTQKF 219
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 23/262 (8%)
Query: 119 GQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHP-NVIKLEGL 177
GQ ++ + T + VA+K ++ + E M+ E++IL + H NV+ L G
Sbjct: 41 GQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS-ELKILIHIGHHLNVVNLLG- 98
Query: 178 ATSRMQYSLYLVFDFMQSDLTKIICRPGQK------------LTEPQVKCYMQQLLSGLQ 225
A ++ L ++ +F + R + LT + Y Q+ G++
Sbjct: 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGME 158
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTSRVVTLWYRAPEL 283
R +HRD+ A N+L+ + ++KI DFGL+ + P +R+ W APE
Sbjct: 159 FLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWM-APET 217
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFKLCGT--PSEDYWKKM 340
+ Y + D+WS G LL E+F +G PG E+ R K GT + DY
Sbjct: 218 IFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLK-EGTRMRAPDYTTPE 275
Query: 341 KLTTTFRPQHYKPSFREVFGEF 362
T H +PS R F E
Sbjct: 276 MYQTMLDCWHGEPSQRPTFSEL 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 118 VGQGTYSNVYKAR--DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY D D KI A+K + T E +F+ I I++ HPNV+ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 94
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ R + S +V +M+ DL I T + + Q+ G++ + +
Sbjct: 95 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 153
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRV---VTLWYRAPELLLGSTDY 290
HRD+ A N ++D+ +K+ADFGL+ K+ + ++ + + + A E L + +
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE-SLQTQKF 212
Query: 291 GVGIDLWSAGCLLAEMFI-GRPLMP 314
D+WS G LL E+ G P P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 94
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII---------------CRPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + P ++L+ +
Sbjct: 95 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 213 RLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 87
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII---------------CRPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + P ++L+ +
Sbjct: 88 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 206 RLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 259
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 86
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII---------------CRPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + P ++L+ +
Sbjct: 87 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 205 RLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 258
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 208 LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQ 265
LT + CY Q+ G++ R +HRD+ A N+L+ + ++KI DFGL+ + P
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 266 KGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQLH 323
+R+ W APE + Y + D+WS G LL E+F +G PG + + E
Sbjct: 257 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 314
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + + DY T H +PS R F E
Sbjct: 315 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 353
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 94
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII---------------CRPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + P ++L+ +
Sbjct: 95 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 213 RLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 208 LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQ 265
LT + CY Q+ G++ R +HRD+ A N+L+ + ++KI DFGL+ + P
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 266 KGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQLH 323
+R+ W APE + Y + D+WS G LL E+F +G PG + + E
Sbjct: 250 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 307
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + + DY T H +PS R F E
Sbjct: 308 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 346
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 117 KVGQGTYSNVYKA--RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
++G G + +V + R R VA+K ++ T + ++ + M RE +I+ +LD+P +++L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM-REAQIMHQLDNPYIVRL 75
Query: 175 EGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ + +L LV + L K + +++ V + Q+ G+++ E+ +
Sbjct: 76 IGVCQAE---ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLW---YRAPELLLGSTDY 290
HRD+ A N+L+ KI+DFGLS + T+R W + APE + +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPE-CINFRKF 190
Query: 291 GVGIDLWSAGCLLAE 305
D+WS G + E
Sbjct: 191 SSRSDVWSYGVTMWE 205
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 208 LTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQ 265
LT + CY Q+ G++ R +HRD+ A N+L+ + ++KI DFGL+ + P
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 266 KGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPG-RTEVEQLH 323
+R+ W APE + Y + D+WS G LL E+F +G PG + + E
Sbjct: 248 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 305
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEF 362
R+ + + DY T H +PS R F E
Sbjct: 306 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 344
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 44/224 (19%)
Query: 118 VGQGTYSNVYKA-----RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVI 172
+G+G + V KA + R VA+K ++ + + P ++ + E +L++++HP+VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 173 KLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQK------------------------L 208
KL G + L L+ ++ + + R +K L
Sbjct: 90 KLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 209 TEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS------NFFI 262
T + + Q+ G+Q+ E ++HRD+ A N+L+ + +KI+DFGLS + +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 263 PKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ +G R+ W L Y D+WS G LL E+
Sbjct: 208 KRSQG----RIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEI 245
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 47/293 (16%)
Query: 113 DKLAKVGQGT--YSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD-HP 169
D L +GT Y ++ RD VA+K++ PE F RE+++L++ D HP
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRD------VAVKRIL-----PECFSFADREVQLLRESDEHP 78
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHE 229
NVI+ T + + Y+ + + L + + + + +QQ SGL H H
Sbjct: 79 NVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS 136
Query: 230 RGILHRDIKASNLLI---DKSGMLK--IADFGLS-NFFIPKQKGPLTSRVV-TLWYRAPE 282
I+HRD+K N+LI + G +K I+DFGL + + S V T + APE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 283 LLLGSTDYG--VGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKM 340
+L +D++SAGC+ + G++ Q + + C
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS---------- 246
Query: 341 KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
L +H RE ++ ++A+DP R +A L++ FF
Sbjct: 247 -LDCLHPEKHEDVIARE-----------LIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDT-SEPESVKFMAREIRILQKLDHPNVIK 173
L ++G G + V + R VA+K ++ + SE E ++ E +++ L H +++
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQ 68
Query: 174 LEGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ T Q ++++ ++M + L + + Q+ + + +++ +
Sbjct: 69 LYGVCTK--QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGV 292
LHRD+ A N L++ G++K++DFGLS + + + + + PE+L+ S +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSK-FSS 185
Query: 293 GIDLWSAGCLLAEMF 307
D+W+ G L+ E++
Sbjct: 186 KSDIWAFGVLMWEIY 200
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 148/359 (41%), Gaps = 76/359 (21%)
Query: 99 EVLAGLVPKSADSYDKLAKVGQGTYSNVYKARDR-DTG--KIVALKKVRFDTSEPESVKF 155
E L VP+ ++ + K+G+GT+S+VY A + G + +ALK + TS P +
Sbjct: 10 EKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL-IPTSHPIRI-- 66
Query: 156 MAREIRILQKLD-HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVK 214
A E++ L NV+ ++ + + + +S L + L+ +V+
Sbjct: 67 -AAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEVR 120
Query: 215 CYMQQLLSGLQHCHERGILHRDIKASNLLIDKS-GMLKIADFGLSNF----------FIP 263
YM L L+ H+ GI+HRD+K SN L ++ + DFGL+ F+
Sbjct: 121 EYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQ 180
Query: 264 KQ-----------------KGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ + + R T +RAPE+L + ID+WSAG + +
Sbjct: 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240
Query: 307 FIGR-PLMPGRTEVEQLHRIFKLCGT--------------------PSEDYWKKM----- 340
GR P ++ L +I + G+ P++D K
Sbjct: 241 LSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRG 300
Query: 341 ------KLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGTAASALQNEFF 393
KLT+ + + E + E P +Y +L LL L+PA R TA AL + FF
Sbjct: 301 MDSSTPKLTSDIQGH---ATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 108 SADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLD 167
++D++ +G+G + VYK R D G +VA+K+++ + ++ ++F E+ ++
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQFQT-EVEMISMAV 85
Query: 168 HPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLS----- 222
H N+++L G + + LV+ +M ++ + C + ++P + +Q ++
Sbjct: 86 HRNLLRLRGFCMTPTER--LLVYPYM-ANGSVASCLRERPESQPPLDWPKRQRIALGSAR 142
Query: 223 GLQHCHER---GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYR 279
GL + H+ I+HRD+KA+N+L+D+ + DFGL+ K + + +
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHI 202
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMFIGR 310
APE L + D++ G +L E+ G+
Sbjct: 203 APE-YLSTGKSSEKTDVFGYGVMLLELITGQ 232
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 44/224 (19%)
Query: 118 VGQGTYSNVYKA-----RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVI 172
+G+G + V KA + R VA+K ++ + + P ++ + E +L++++HP+VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 173 KLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQK------------------------L 208
KL G + L L+ ++ + + R +K L
Sbjct: 90 KLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 209 TEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS------NFFI 262
T + + Q+ G+Q+ E ++HRD+ A N+L+ + +KI+DFGLS + +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 263 PKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ +G R+ W L Y D+WS G LL E+
Sbjct: 208 KRSQG----RIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEI 245
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVA---LKKVRFDTSEPESVKFMAREIRILQKLDHPNVIK 173
++G+G++ VYK D +T VA L+ + SE + K E L+ L HPN+++
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFK---EEAEXLKGLQHPNIVR 89
Query: 174 L--EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERG 231
+T + + + LV + S K + + ++ + +Q+L GLQ H R
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 232 --ILHRDIKASNLLIDK-SGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGST 288
I+HRD+K N+ I +G +KI D GL+ K+ + + T + APE
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXY--EE 204
Query: 289 DYGVGIDLWSAG-CLL 303
Y +D+++ G C L
Sbjct: 205 KYDESVDVYAFGXCXL 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 118 VGQGTYSNVYKAR----DRDTGK---IVALKKVRFDTSEPESVKFMAREIRILQKL-DHP 169
+G+G + V A D+D VA+K ++ D +E + ++ E+ +++ + H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 135
Query: 170 NVIKLEGLATSRMQYSLYLVFDFM-QSDLTKII---------------CRPGQKLTEPQV 213
N+I L G T LY++ ++ + +L + + P ++L+ +
Sbjct: 136 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN--FFIPKQKGPLTS 271
Q+ G+++ + +HRD+ A N+L+ + ++KIADFGL+ I K
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 272 RVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRIFK 327
R+ W APE L Y D+WS G LL E+F +G PG VE+L ++ K
Sbjct: 254 RLPVKW-MAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 307
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 196 DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLID-KSGMLKIAD 254
DL I G L E + + Q+L ++HCH G+LHRDIK N+LID G LK+ D
Sbjct: 143 DLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID 201
Query: 255 FGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIG 309
FG + T T Y PE + +G +WS G LL +M G
Sbjct: 202 FGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 121/300 (40%), Gaps = 72/300 (24%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRF----DTSEPESVKFMAREIRILQKL-DHPNVI 172
+G G + V +A GK A+ KV T+ + + + E++I+ L H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 173 KLEGLATSR------MQYSLYLVFDFMQSDLTKIICR---------------PGQKLTEP 211
L G T +Y Y DL + R P ++L+
Sbjct: 114 NLLGACTHGGPVLVITEYCCY-------GDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 212 QVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGL-------SNFFIPK 264
+ + Q+ G+ + +HRD+ A N+L+ + KI DFGL SN+ +
Sbjct: 167 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV-- 224
Query: 265 QKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLH 323
KG +R+ W APE + Y V D+WS G LL E+F +G PG + +
Sbjct: 225 -KG--NARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 279
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGT 383
++ K + Y Q +P+F P + Y I+ AL+P +R T
Sbjct: 280 KLVK------DGY------------QMAQPAFA------PKNIYSIMQACWALEPTHRPT 315
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 125 NVYKARDRDTGKIVALK-KVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQ 183
+VY+A D +IVALK +S+P RE R +L P+V+ + Q
Sbjct: 49 DVYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQ 108
Query: 184 YSLYLVFDFMQS-DLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNL 242
LY+ + DL + R G L P+ ++Q+ S L H G HRD+K N+
Sbjct: 109 --LYVDXRLINGVDLAAXLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENI 165
Query: 243 LIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCL 302
L+ + DFG+++ ++ L + V TL+Y APE + D+++ C+
Sbjct: 166 LVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPE-RFSESHATYRADIYALTCV 224
Query: 303 LAEMFIGRPLMPG 315
L E G P G
Sbjct: 225 LYECLTGSPPYQG 237
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH-------PN 170
+G G V + R TG+ ALK + +D+ + AR Q++DH P+
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALK-LLYDSPK-------AR-----QEVDHHWQASGGPH 64
Query: 171 VIKLEGLATSRM--QYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
++ + + + + L ++ + M+ ++I R Q TE + M+ + + +Q
Sbjct: 65 IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 124
Query: 227 CHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
H I HRD+K NLL +K +LK+ DFG F + L + T +Y APE
Sbjct: 125 LHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCYTPYYVAPE- 180
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+LG Y D+WS G ++ + G P
Sbjct: 181 VLGPEKYDKSCDMWSLGVIMYILLCGFP 208
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPES-VKFMAREIRILQKLDHPNVIK 173
+G G + VYK + +T KI K+ +T+ P++ V+FM E I+ +DHP++++
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM-DEALIMASMDHPHLVR 104
Query: 174 LEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ S ++ LV M L + + + + + Q+ G+ + ER +
Sbjct: 105 LLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 161
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFF 261
+HRD+ A N+L+ +KI DFGL+
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLL 190
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 76
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 77 IGVIT---ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRDI A N+L+ + +K+ DFGLS + + + + + APE + +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE-SINFRRFTSA 192
Query: 294 IDLWSAGCLLAEMFI 308
D+W G + E+ +
Sbjct: 193 SDVWMFGVCMWEILM 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 120/298 (40%), Gaps = 70/298 (23%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRF----DTSEPESVKFMAREIRILQKL-DHPNVI 172
+G G + V +A GK A+ KV T+ + + + E++I+ L H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 173 KLEGLATSR------MQYSLYLVFDFMQSDLTKIICRPGQKL-TEPQVKC---------- 215
L G T +Y Y DL + R + L T+P
Sbjct: 114 NLLGACTHGGPVLVITEYCCY-------GDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 216 --YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGL-------SNFFIPKQK 266
+ Q+ G+ + +HRD+ A N+L+ + KI DFGL SN+ + K
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV---K 223
Query: 267 GPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRI 325
G +R+ W APE + Y V D+WS G LL E+F +G PG + +++
Sbjct: 224 G--NARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
Query: 326 FKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGT 383
K + Y Q +P+F P + Y I+ AL+P +R T
Sbjct: 280 VK------DGY------------QMAQPAFA------PKNIYSIMQACWALEPTHRPT 313
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 45/297 (15%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRIL-QKLDHPNVIKLEG 176
+G+G ++ V + T + A+K + S F RE+ +L Q H NV++L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF--REVEMLYQCQGHRNVLELIE 78
Query: 177 LATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
++ YLVF+ M+ S L+ I R + E + +Q + S L H +GI H
Sbjct: 79 FFEEEDRF--YLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAH 134
Query: 235 RDIKASNLLIDKSGM---LKIADFGLSNFF------IPKQKGPLTSRVVTLWYRAPELLL 285
RD+K N+L + +KI DFGL + P L + + Y APE++
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 286 GSTD----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
++ Y DLWS G +L + G P GR CG S+ W + +
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR------------CG--SDCGWDRGE 240
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYG--------ILTTLLALDPAYRGTAASALQN 390
+ ++ S +E EFP + +++ LL D R +AA LQ+
Sbjct: 241 ACPACQNMLFE-SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDH-------PN 170
+G G V + R TG+ ALK + +D+ + AR Q++DH P+
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALK-LLYDSPK-------AR-----QEVDHHWQASGGPH 83
Query: 171 VIKLEGLATSRM--QYSLYLVFDFMQSD--LTKIICRPGQKLTEPQVKCYMQQLLSGLQH 226
++ + + + + L ++ + M+ ++I R Q TE + M+ + + +Q
Sbjct: 84 IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 143
Query: 227 CHERGILHRDIKASNLLI---DKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPEL 283
H I HRD+K NLL +K +LK+ DFG F + L + T +Y APE
Sbjct: 144 LHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCYTPYYVAPE- 199
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
+LG Y D+WS G ++ + G P
Sbjct: 200 VLGPEKYDKSCDMWSLGVIMYILLCGFP 227
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 76
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 77 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNF-----FIPKQKGPLTSRVVTLWYRAPELLLGST 288
HRDI A N+L+ + +K+ DFGLS + + KG L + + APE +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WMAPE-SINFR 187
Query: 289 DYGVGIDLWSAGCLLAEMFI 308
+ D+W G + E+ +
Sbjct: 188 RFTSASDVWMFGVCMWEILM 207
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 15 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T+ L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 72 YSTAP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 185
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 79
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 80 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 136
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRDI A N+L+ + +K+ DFGLS + + + + + APE + +
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSA 195
Query: 294 IDLWSAGCLLAEMFI 308
D+W G + E+ +
Sbjct: 196 SDVWMFGVCMWEILM 210
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 120/298 (40%), Gaps = 70/298 (23%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRF----DTSEPESVKFMAREIRILQKL-DHPNVI 172
+G G + V +A GK A+ KV T+ + + + E++I+ L H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 173 KLEGLATSR------MQYSLYLVFDFMQSDLTKIICRPGQKL-TEPQVKC---------- 215
L G T +Y Y DL + R + L T+P
Sbjct: 114 NLLGACTHGGPVLVITEYCCY-------GDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 216 --YMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGL-------SNFFIPKQK 266
+ Q+ G+ + +HRD+ A N+L+ + KI DFGL SN+ + K
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV---K 223
Query: 267 GPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLHRI 325
G +R+ W APE + Y V D+WS G LL E+F +G PG + +++
Sbjct: 224 G--NARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
Query: 326 FKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGT 383
K + Y Q +P+F P + Y I+ AL+P +R T
Sbjct: 280 VK------DGY------------QMAQPAFA------PKNIYSIMQACWALEPTHRPT 313
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 117 KVGQGTYSNVYKA--RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
++G G + +V + R R VA+K ++ T + ++ + M RE +I+ +LD+P +++L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM-REAQIMHQLDNPYIVRL 401
Query: 175 EGLATSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ + +L LV + L K + +++ V + Q+ G+++ E+ +
Sbjct: 402 IGVCQAE---ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLW---YRAPELLLGSTDY 290
HR++ A N+L+ KI+DFGLS + T+R W + APE + +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPE-CINFRKF 516
Query: 291 GVGIDLWSAGCLLAE 305
D+WS G + E
Sbjct: 517 SSRSDVWSYGVTMWE 531
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 73
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 74 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 130
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRDI A N+L+ + +K+ DFGLS + + + + + APE + +
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSA 189
Query: 294 IDLWSAGCLLAEMFI 308
D+W G + E+ +
Sbjct: 190 SDVWMFGVCMWEILM 204
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 144/363 (39%), Gaps = 83/363 (22%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL----- 166
Y + K+G G +S V+ + D K VA+K V+ S + EIR+L+ +
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRNSDP 95
Query: 167 DHPN----VIKLEGLATSRMQYS-LYLVFDFMQSDLTKIICRPG-QKLTEPQVKCYMQQL 220
+ PN V L+ S + + + +VF+ + L K I + Q L P VK +QQ+
Sbjct: 96 NDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQV 155
Query: 221 LSGLQHCHERG-ILHRDIKASNLLI-----------------DKSG-------MLKIADF 255
L GL + H + I+H DIK N+L+ +SG + A
Sbjct: 156 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 215
Query: 256 GLSNFFI----PKQKGPLTSRVVTL----W-------------YRAPELLLGSTDYGVGI 294
NF + PK L ++ L W YR+ E+L+GS Y
Sbjct: 216 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS-GYNTPA 274
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVE----------------QLHRIFKLCGTPSEDYWK 338
D+WS C+ E+ G L + E ++ R + G S++++
Sbjct: 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFT 334
Query: 339 K---MKLTTTFRPQHYKPSFREVFGEFPPSSYG---ILTTLLALDPAYRGTAASALQNEF 392
K +K T +P E + + G L +L L P R TAA L++ +
Sbjct: 335 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 394
Query: 393 FNA 395
N+
Sbjct: 395 LNS 397
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 78
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 79 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 135
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRDI A N+L+ + +K+ DFGLS + + + + + APE + +
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSA 194
Query: 294 IDLWSAGCLLAEMFI 308
D+W G + E+ +
Sbjct: 195 SDVWMFGVCMWEILM 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 81
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 82 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 138
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRDI A N+L+ + +K+ DFGLS + + + + + APE + +
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSA 197
Query: 294 IDLWSAGCLLAEMFI 308
D+W G + E+ +
Sbjct: 198 SDVWMFGVCMWEILM 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
L +G+G + +V R G VA+K ++ D + + F+A E ++ +L H N+++L
Sbjct: 17 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT---AQAFLA-EASVMTQLRHSNLVQL 70
Query: 175 EGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQ---QLLSGLQHCHER 230
G+ + LY+V ++M + L + G+ + C ++ + +++
Sbjct: 71 LGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGN 127
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+HRD+ A N+L+ + + K++DFGL+ Q T ++ W APE L + +
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKW-TAPEALREAA-F 182
Query: 291 GVGIDLWSAGCLLAEMF-IGR---PLMPGRTEVEQLHRIFKL 328
D+WS G LL E++ GR P +P + V ++ + +K+
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 224
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 104
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 105 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 161
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNF-----FIPKQKGPLTSRVVTLWYRAPELLLGST 288
HRDI A N+L+ + +K+ DFGLS + + KG L + + APE +
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WMAPE-SINFR 215
Query: 289 DYGVGIDLWSAGCLLAEMFI 308
+ D+W G + E+ +
Sbjct: 216 RFTSASDVWMFGVCMWEILM 235
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 76
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 77 IGVIT---ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNF-----FIPKQKGPLTSRVVTLWYRAPELLLGST 288
HRDI A N+L+ + +K+ DFGLS + + KG L + + APE +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WMAPE-SINFR 187
Query: 289 DYGVGIDLWSAGCLLAEMFI 308
+ D+W G + E+ +
Sbjct: 188 RFTSASDVWMFGVCMWEILM 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 109/222 (49%), Gaps = 22/222 (9%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
L +G+G + +V R G VA+K ++ D + + F+A E ++ +L H N+++L
Sbjct: 198 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT---AQAFLA-EASVMTQLRHSNLVQL 251
Query: 175 EGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQ---QLLSGLQHCHER 230
G+ + LY+V ++M + L + G+ + C ++ + +++
Sbjct: 252 LGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGN 308
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+HRD+ A N+L+ + + K++DFGL+ Q T ++ W APE L +
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKW-TAPEALR-EKKF 363
Query: 291 GVGIDLWSAGCLLAEMF-IGR---PLMPGRTEVEQLHRIFKL 328
D+WS G LL E++ GR P +P + V ++ + +K+
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 405
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 17 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 74 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 130
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 187
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 144/363 (39%), Gaps = 83/363 (22%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKL----- 166
Y + K+G G +S V+ + D K VA+K V+ S + EIR+L+ +
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRNSDP 79
Query: 167 DHPN----VIKLEGLATSRMQYS-LYLVFDFMQSDLTKIICRPG-QKLTEPQVKCYMQQL 220
+ PN V L+ S + + + +VF+ + L K I + Q L P VK +QQ+
Sbjct: 80 NDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQV 139
Query: 221 LSGLQHCHERG-ILHRDIKASNLLID-----------------KSG-------MLKIADF 255
L GL + H + I+H DIK N+L+ +SG + A
Sbjct: 140 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 199
Query: 256 GLSNFFI----PKQKGPLTSRVVTL----W-------------YRAPELLLGSTDYGVGI 294
NF + PK L ++ L W YR+ E+L+GS Y
Sbjct: 200 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS-GYNTPA 258
Query: 295 DLWSAGCLLAEMFIGRPLMPGRTEVE----------------QLHRIFKLCGTPSEDYWK 338
D+WS C+ E+ G L + E ++ R + G S++++
Sbjct: 259 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFT 318
Query: 339 K---MKLTTTFRPQHYKPSFREVFGEFPPSSYG---ILTTLLALDPAYRGTAASALQNEF 392
K +K T +P E + + G L +L L P R TAA L++ +
Sbjct: 319 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 378
Query: 393 FNA 395
N+
Sbjct: 379 LNS 381
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 20 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 77 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 190
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 15 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 72 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 185
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 15 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 72 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 185
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 20 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 77 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 190
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 76
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 77 IGVIT---ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNF-----FIPKQKGPLTSRVVTLWYRAPELLLGST 288
HRDI A N+L+ + +K+ DFGLS + + KG L + + APE +
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WMAPE-SINFR 187
Query: 289 DYGVGIDLWSAGCLLAEMFI 308
+ D+W G + E+ +
Sbjct: 188 RFTSASDVWMFGVCMWEILM 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPES-VKFMAREIRILQKLDHPNVIK 173
+G G + VYK + +T KI K+ +T+ P++ V+FM E I+ +DHP++++
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM-DEALIMASMDHPHLVR 81
Query: 174 LEGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGI 232
L G+ S ++ LV M L + + + + + Q+ G+ + ER +
Sbjct: 82 LLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 138
Query: 233 LHRDIKASNLLIDKSGMLKIADFGLSNFF 261
+HRD+ A N+L+ +KI DFGL+
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLL 167
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 42 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 99 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 155
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 212
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ 233
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 456
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVK----------CYMQQLLSGL 224
G+ T + ++++ + +C G+ + QV+ Y QL + L
Sbjct: 457 IGVIT---ENPVWIIME---------LCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 225 QHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELL 284
+ + +HRDI A N+L+ + +K+ DFGLS + + + + + APE
Sbjct: 505 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-S 563
Query: 285 LGSTDYGVGIDLWSAGCLLAEMFI 308
+ + D+W G + E+ +
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILM 587
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 43 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 100 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 213
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 35 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 92 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 148
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 205
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 118 VGQGTYSNVYKA---RDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + +V++ + VA+K + TS+ KF+ +E +++ DHP+++KL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL-QEALTMRQFDHPHIVKL 456
Query: 175 EGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGIL 233
G+ T + ++++ + +L + L + Y QL + L + + +
Sbjct: 457 IGVIT---ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV 513
Query: 234 HRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVG 293
HRDI A N+L+ + +K+ DFGLS + + + + + APE + +
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSA 572
Query: 294 IDLWSAGCLLAEMFI 308
D+W G + E+ +
Sbjct: 573 SDVWMFGVCMWEILM 587
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 102 AGLVPKSADSYDKLAK--------VGQGTYSNVYKA--RDRDTGKI-VALKKVRFDTSEP 150
+GLVP+ + Y +A+ +G+G + VY+ + KI VA+K + D +
Sbjct: 9 SGLVPRGSPQYG-IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD 67
Query: 151 ESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTE 210
KFM+ + I++ LDHP+++KL G+ + + ++ + +L + R L
Sbjct: 68 NKEKFMSEAV-IMKNLDHPHIVKLIGIIEEEPTWIIMELYPY--GELGHYLERNKNSLKV 124
Query: 211 PQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFF 261
+ Y Q+ + + +HRDI N+L+ +K+ DFGLS +
Sbjct: 125 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 175
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 117 KVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKLEG 176
++G G++ VYK + VA+K + P+ ++ E+ +L+K H N++ G
Sbjct: 43 RIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 177 LATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHR 235
+T + L +V + + S L + K ++ +Q G+ + H + I+HR
Sbjct: 100 YST---KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 236 DIKASNLLIDKSGMLKIADFGL----SNFFIPKQKGPLTSRVVTLWYRAPEL--LLGSTD 289
D+K++N+ + + +KI DFGL S + Q L+ + LW APE+ +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWM-APEVIRMQDKNP 213
Query: 290 YGVGIDLWSAGCLLAEMFIGR 310
Y D+++ G +L E+ G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 117 KVGQGTYSNVYKARDRD----TGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVI 172
++G+G + V+ A + KI+ K D S+ F RE +L L H +++
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDF-HREAELLTNLQHEHIV 78
Query: 173 KLEGLATSRMQYSLYLVFDFMQ-SDLTKII------------CRPGQKLTEPQVKCYMQQ 219
K G+ L +VF++M+ DL K + P +LT+ Q+ QQ
Sbjct: 79 KFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 220 LLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS-NFFIPKQKGPLTSRVVTLWY 278
+ +G+ + + +HRD+ N L+ ++ ++KI DFG+S + + ++ + +
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 279 RAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
PE ++ + D+WS G +L E+F
Sbjct: 197 MPPESIM-YRKFTTESDVWSLGVVLWEIF 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 109/222 (49%), Gaps = 22/222 (9%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
L +G+G + +V R G VA+K ++ D + + F+A E ++ +L H N+++L
Sbjct: 26 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT---AQAFLA-EASVMTQLRHSNLVQL 79
Query: 175 EGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQ---QLLSGLQHCHER 230
G+ + LY+V ++M + L + G+ + C ++ + +++
Sbjct: 80 LGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGN 136
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+HRD+ A N+L+ + + K++DFGL+ Q T ++ W APE L +
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKW-TAPEALR-EKKF 191
Query: 291 GVGIDLWSAGCLLAEMF-IGR---PLMPGRTEVEQLHRIFKL 328
D+WS G LL E++ GR P +P + V ++ + +K+
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 233
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 103 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 162
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 163 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 101 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 160
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 161 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 109/222 (49%), Gaps = 22/222 (9%)
Query: 115 LAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
L +G+G + +V R G VA+K ++ D + + F+A E ++ +L H N+++L
Sbjct: 11 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT---AQAFLA-EASVMTQLRHSNLVQL 64
Query: 175 EGLATSRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKCYMQ---QLLSGLQHCHER 230
G+ + LY+V ++M + L + G+ + C ++ + +++
Sbjct: 65 LGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGN 121
Query: 231 GILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDY 290
+HRD+ A N+L+ + + K++DFGL+ Q T ++ W APE L +
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKW-TAPE-ALREKKF 176
Query: 291 GVGIDLWSAGCLLAEMF-IGR---PLMPGRTEVEQLHRIFKL 328
D+WS G LL E++ GR P +P + V ++ + +K+
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 147 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 206
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 207 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 261
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 103 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 162
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 163 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 153 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 212
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 213 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 267
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 102 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 161
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 162 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 216
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 107 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 166
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 167 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 221
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 109 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 168
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 169 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 117 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 176
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 177 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 231
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 108 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 167
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT+ T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 168 DFGFAKE--TTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 65/300 (21%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRF----DTSEPESVKFMAREIRILQKL-DHPNVI 172
+G G + V +A GK A+ KV T+ + + + E++I+ L H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 173 KLEGLATSR------MQYSLYL-VFDFMQSDLTKII---CRPGQK-----------LTEP 211
L G T +Y Y + +F++ ++ PGQ L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 212 QVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGL-------SNFFIPK 264
+ + Q+ G+ + +HRD+ A N+L+ + KI DFGL SN+ +
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV-- 216
Query: 265 QKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF-IGRPLMPGRTEVEQLH 323
KG +R+ W APE + Y V D+WS G LL E+F +G PG + +
Sbjct: 217 -KG--NARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 271
Query: 324 RIFKLCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYRGT 383
++ K + Y Q +P+F P + Y I+ AL+P +R T
Sbjct: 272 KLVK------DGY------------QMAQPAFA------PKNIYSIMQACWALEPTHRPT 307
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 197 LTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDK---SGMLKIA 253
++I R Q TE + M+ + +Q+ H I HRD+K NLL + +LK+
Sbjct: 101 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 160
Query: 254 DFGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRP 311
DFG + LT T +Y APE +LG Y D+WS G ++ + G P
Sbjct: 161 DFGFAKE--TTSHNSLTEPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 118
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 119 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 178
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 179 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 118
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 119 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 178
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 179 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 60 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 116
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 117 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 176
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 177 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 405 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 461
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 462 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 521
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 522 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 567
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 404 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 460
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 461 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 521 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 566
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 52 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 108
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 109 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 169 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 102
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 103 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 163 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 40 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 96
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 97 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 156
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 157 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 202
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 118 VGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVKFMAREIRIL-QKLDHPNVIKLEG 176
+G+G ++ V + T + A+K + S F RE+ +L Q H NV++L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF--REVEMLYQCQGHRNVLELIE 78
Query: 177 LATSRMQYSLYLVFDFMQ--SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
++ YLVF+ M+ S L+ I R + E + +Q + S L H +GI H
Sbjct: 79 FFEEEDRF--YLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAH 134
Query: 235 RDIKASNLLIDKSGM---LKIADFGLSNFF------IPKQKGPLTSRVVTLWYRAPELLL 285
RD+K N+L + +KI DF L + P L + + Y APE++
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 286 GSTD----YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFKLCGTPSEDYWKKMK 341
++ Y DLWS G +L + G P GR CG S+ W + +
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR------------CG--SDCGWDRGE 240
Query: 342 LTTTFRPQHYKPSFREVFGEFPPSSYG--------ILTTLLALDPAYRGTAASALQN 390
+ ++ S +E EFP + +++ LL D R +AA LQ+
Sbjct: 241 ACPACQNMLFE-SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 42 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 98
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS---- 258
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 99 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158
Query: 259 ---NFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
N++ + G + WY APE + + D+WS G L+ E F
Sbjct: 159 ADENYYKAQTHGKWPVK----WY-APE-CINYYKFSSKSDVWSFGVLMWEAF 204
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 105 VPKSADS---YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESV---KF--M 156
+P AD+ Y+K ++G+G + V+K R +VA+K + SE E+ KF
Sbjct: 13 LPTLADNEIEYEK--QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEF 70
Query: 157 AREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKC 215
RE+ I+ L+HPN++KL GL M +V +F+ DL + +
Sbjct: 71 QREVFIMSNLNHPNIVKLYGL----MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 216 YMQQLLSGLQHCHERG--ILHRDIKASNLL---IDKSGML--KIADFGLSNFFIPKQKGP 268
M + G+++ + I+HRD+++ N+ +D++ + K+ADFGLS + G
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL 186
Query: 269 LTSRVVTLWYRAPELLLGSTD-YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
L + + APE + + Y D +S +L + G
Sbjct: 187 LGN----FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE----------------- 225
Query: 328 LCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYR 381
G E + K+K R + +P+ E + PP ++ + DP R
Sbjct: 226 --GPFDEYSYGKIKFINMIREEGLRPTIPE---DCPPRLRNVIELCWSGDPKKR 274
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 76
Query: 168 HPNVIKLEGLA-TSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
+P+V +L G+ TS +Q L+ M L + + + + Q+ G+
Sbjct: 77 NPHVCRLLGICLTSTVQ----LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMN 132
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYRAPEL 283
+ +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W +
Sbjct: 133 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMF 307
L Y D+WS G + E+
Sbjct: 193 L--HRIYTHQSDVWSYGVTVWELM 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 118 VGQGTYSNVYKA--RDRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY+ + KI VA+K + D + KFM+ + I++ LDHP+++KL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKL 78
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
G+ + + ++ + +L + R L + Y Q+ + + +H
Sbjct: 79 IGIIEEEPTWIIMELYPY--GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 136
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFF 261
RDI N+L+ +K+ DFGLS +
Sbjct: 137 RDIAVRNILVASPECVKLGDFGLSRYI 163
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG---KI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK G KI VA+K++R TS P++ K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q + L + D+++ I Q L + Q+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 129
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 190 LESIL--HRIYTHQSDVWSYGVTVWELM 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG---KI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK G KI VA+K++R TS P++ K + E ++ +D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 79
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q + L + D+++ I Q L + Q+
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 131
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 192 LESIL--HRIYTHQSDVWSYGVTVWELM 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG---KI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK G KI VA+K++R TS P++ K + E ++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 78
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q + L + D+++ I Q L + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 130
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELM 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG---KI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK G KI VA+K++R TS P++ K + E ++ +D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 76
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q + L + D+++ I Q L + Q+
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 128
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 189 LESIL--HRIYTHQSDVWSYGVTVWELM 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG---KI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK G KI VA+K++R TS P++ K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q + L + D+++ I Q L + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 127
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 188 LESIL--HRIYTHQSDVWSYGVTVWELM 213
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 118 VGQGTYSNVYKA--RDRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLDHPNVIKL 174
+G+G + VY+ + KI VA+K + D + KFM+ + I++ LDHP+++KL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKL 74
Query: 175 EGLATSRMQYSLYLVFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLLSGLQHCHERGILH 234
G+ + + ++ + +L + R L + Y Q+ + + +H
Sbjct: 75 IGIIEEEPTWIIMELYPY--GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 132
Query: 235 RDIKASNLLIDKSGMLKIADFGLSNFF 261
RDI N+L+ +K+ DFGLS +
Sbjct: 133 RDIAVRNILVASPECVKLGDFGLSRYI 159
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 159 EIRILQKLDHPNVIKLEGLAT--SRMQYSLYLVFDFMQ----SDLTKIICRPGQKL---- 208
E+ L + H N+++ G + + L+L+ F + SD K +L
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIA 127
Query: 209 -TEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLS-NFFIPKQK 266
T + Y+ + + GL+ H+ I HRDIK+ N+L+ + IADFGL+ F K
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187
Query: 267 GPLTSRVVTLWYRAPELLLGSTD-----------YGVGIDLW--SAGCLLAEMFIGRPLM 313
G +V T Y APE+L G+ + Y +G+ LW ++ C A+ + ++
Sbjct: 188 GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
Query: 314 PGRTEVEQ 321
P E+ Q
Sbjct: 248 PFEEEIGQ 255
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 143 VRFDTSEPESVKFMAREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQSDLTKIIC 202
++ + ++P + E ++Q+LD+P ++++ G+ + S LV + +
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMAELGPLNKYL 102
Query: 203 RPGQKLTEPQVKCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFI 262
+ + + + + + Q+ G+++ E +HRD+ A N+L+ KI+DFGLS
Sbjct: 103 QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 263 PKQ---KGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMF 307
+ K + WY APE + + D+WS G L+ E F
Sbjct: 163 ADENXYKAQTHGKWPVKWY-APE-CINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 168 HPNVIKLEGLA-TSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
+P+V +L G+ TS +Q L+ M L + + + + Q+ G+
Sbjct: 76 NPHVCRLLGICLTSTVQ----LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYRAPEL 283
+ +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W +
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMF 307
L Y D+WS G + E+
Sbjct: 192 L--HRIYTHQSDVWSYGVTVWELM 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 28/212 (13%)
Query: 115 LAKVGQGTYSNVYKARDRDTGK-----IVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
L ++GQG++ VY+ RD K VA+K V S E ++F+ E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCH 80
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKII--CRPGQKLTEPQVKCYMQQLL------ 221
+V++L G+ S+ Q +L ++ DL + RP + + +Q+++
Sbjct: 81 HVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 222 -SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGL------SNFFIPKQKGPLTSRVV 274
G+ + + + +HRD+ A N ++ +KI DFG+ ++++ KG L R
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 197
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ APE L + D+WS G +L E+
Sbjct: 198 ---WMAPESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 28/212 (13%)
Query: 115 LAKVGQGTYSNVYKARDRDTGK-----IVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
L ++GQG++ VY+ RD K VA+K V S E ++F+ E +++
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCH 79
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKII--CRPGQKLTEPQVKCYMQQLL------ 221
+V++L G+ S+ Q +L ++ DL + RP + + +Q+++
Sbjct: 80 HVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 222 -SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGL------SNFFIPKQKGPLTSRVV 274
G+ + + + +HRD+ A N ++ +KI DFG+ ++++ KG L R
Sbjct: 139 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 196
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ APE L + D+WS G +L E+
Sbjct: 197 ---WMAPESLKDGV-FTTSSDMWSFGVVLWEI 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 81
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 133
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 134 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 194 LESIL--HRIYTHQSDVWSYGVTVWELM 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG---KI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK G KI VA+K++R TS P++ K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 127
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 188 LESIL--HRIYTHQSDVWSYGVTVWELM 213
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 129
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 190 LESIL--HRIYTHQSDVWSYGVTVWELM 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG---KI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK G KI VA+K++R TS P++ K + E ++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 78
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 130
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 82
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 134
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 195 LESIL--HRIYTHQSDVWSYGVTVWELM 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 75
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 127
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 188 LESIL--HRIYTHQSDVWSYGVTVWELM 213
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 36/196 (18%)
Query: 135 GKIVALKKVRFDTSEPESVKFMAREIRIL-QKLDHPNVIKLEGLATSRMQYSLYLVFDFM 193
G+ VA+K++ D + + M EI++L + DHPNVI+ T+ LY+ +
Sbjct: 57 GRPVAVKRMLIDFCD---IALM--EIKLLTESDDHPNVIRYYCSETT--DRFLYIALELC 109
Query: 194 QSDLTKIICRPGQKLTEPQVK--------CYMQQLLSGLQHCHERGILHRDIKASNLLID 245
+L ++ + +++ +K ++Q+ SG+ H H I+HRD+K N+L+
Sbjct: 110 NLNLQDLV--ESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
Query: 246 KSGMLK-------------IADFGLSNFFIPKQ---KGPLTSRVVTLWYRAPELLLGSTD 289
S I+DFGL Q + L + T +RAPELL ST
Sbjct: 168 TSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTK 227
Query: 290 YGV--GIDLWSAGCLL 303
+ ID++S GC+
Sbjct: 228 RRLTRSIDIFSMGCVF 243
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKARDRDTG---KI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK G KI VA+K++R TS P++ K + E ++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 78
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 130
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELM 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 78
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 130
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELM 216
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 36/196 (18%)
Query: 135 GKIVALKKVRFDTSEPESVKFMAREIRIL-QKLDHPNVIKLEGLATSRMQYSLYLVFDFM 193
G+ VA+K++ D + + M EI++L + DHPNVI+ T+ LY+ +
Sbjct: 57 GRPVAVKRMLIDFCD---IALM--EIKLLTESDDHPNVIRYYCSETT--DRFLYIALELC 109
Query: 194 QSDLTKIICRPGQKLTEPQVK--------CYMQQLLSGLQHCHERGILHRDIKASNLLID 245
+L ++ + +++ +K ++Q+ SG+ H H I+HRD+K N+L+
Sbjct: 110 NLNLQDLV--ESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
Query: 246 KSGMLK-------------IADFGLSNFFIPKQ---KGPLTSRVVTLWYRAPELLLGSTD 289
S I+DFGL Q + L + T +RAPELL ST
Sbjct: 168 TSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTK 227
Query: 290 YGV--GIDLWSAGCLL 303
+ ID++S GC+
Sbjct: 228 RRLTRSIDIFSMGCVF 243
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 85
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 137
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 138 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 198 LESIL--HRIYTHQSDVWSYGVTVWELM 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 100
Query: 168 HPNVIKLEGLA-TSRMQYSLYLVFDFMQSD-LTKIICRPGQKLTEPQVKCYMQQLLSGLQ 225
+P+V +L G+ TS +Q L+ M L + + + + Q+ G+
Sbjct: 101 NPHVCRLLGICLTSTVQ----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 156
Query: 226 HCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYRAPEL 283
+ +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W +
Sbjct: 157 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 284 LLGSTDYGVGIDLWSAGCLLAEMF 307
L Y D+WS G + E+
Sbjct: 217 L--HRIYTHQSDVWSYGVTVWELM 238
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 72
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 124
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 125 EGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 185 LESIL--HRIYTHQSDVWSYGVTVWELM 210
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 115 LAKVGQGTYSNVYKARDRDTGK-----IVALKKVRFDTSEPESVKFMAREIRILQKLDHP 169
L ++GQG++ VY+ RD K VA+K V S E ++F+ E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCH 80
Query: 170 NVIKLEGLATSRMQYSLYLVFDFMQSDLTKII--CRPGQKLTEPQVKCYMQQLL------ 221
+V++L G+ S+ Q +L ++ DL + RP + + +Q+++
Sbjct: 81 HVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 222 -SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSN------FFIPKQKGPLTSRVV 274
G+ + + + +HRD+ A N ++ +KI DFG++ ++ KG L R
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR-- 197
Query: 275 TLWYRAPELLLGSTDYGVGIDLWSAGCLLAEM 306
+ APE L + D+WS G +L E+
Sbjct: 198 ---WMAPESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 69
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q L + D+++ I Q L + Q+
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 121
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFGL+ ++K +V W
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 182 LESIL--HRIYTHQSDVWSYGVTVWELM 207
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 36/228 (15%)
Query: 102 AGLVPKSADSYDKLAKVGQGTYSNVYKAR---DRDTGKIVALKKVRFDTSEPESVKFMAR 158
+GLVP+ S L +G + V+KA+ D KI L+ + SE R
Sbjct: 9 SGLVPRG--SLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSE--------R 58
Query: 159 EIRILQKLDHPNVIKLEGLAT--SRMQYSLYLVFDFM-QSDLTKIICRPGQKLTEPQVKC 215
EI + H N+++ S ++ L+L+ F + LT + G +T ++ C
Sbjct: 59 EIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL--KGNIITWNEL-C 115
Query: 216 YMQQLLS-GLQHCHE-----RG------ILHRDIKASNLLIDKSGMLKIADFGLSNFFIP 263
++ + +S GL + HE RG I HRD K+ N+L+ +ADFGL+ F P
Sbjct: 116 HVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP 175
Query: 264 -KQKGPLTSRVVTLWYRAPELLLGSTDYG----VGIDLWSAGCLLAEM 306
K G +V T Y APE+L G+ ++ + ID+++ G +L E+
Sbjct: 176 GKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 51/295 (17%)
Query: 105 VPKSADS---YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESV---KF--M 156
+P AD+ Y+K ++G+G + V+K R +VA+K + SE E+ KF
Sbjct: 13 LPTLADNEIEYEK--QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEF 70
Query: 157 AREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKC 215
RE+ I+ L+HPN++KL GL M +V +F+ DL + +
Sbjct: 71 QREVFIMSNLNHPNIVKLYGL----MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 216 YMQQLLSGLQHCHERG--ILHRDIKASNLL---IDKSGML--KIADFGLSNFFIPKQKGP 268
M + G+++ + I+HRD+++ N+ +D++ + K+ADFG S + G
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL 186
Query: 269 LTSRVVTLWYRAPELLLGSTD-YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
L + + APE + + Y D +S +L + G
Sbjct: 187 LGN----FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE----------------- 225
Query: 328 LCGTPSEDY-WKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYR 381
P ++Y + K+K R + +P+ E + PP ++ + DP R
Sbjct: 226 ---GPFDEYSYGKIKFINMIREEGLRPTIPE---DCPPRLRNVIELCWSGDPKKR 274
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 49/294 (16%)
Query: 105 VPKSADS---YDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESV---KF--M 156
+P AD+ Y+K ++G+G + V+K R +VA+K + SE E+ KF
Sbjct: 13 LPTLADNEIEYEK--QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEF 70
Query: 157 AREIRILQKLDHPNVIKLEGLATSRMQYSLYLVFDFMQ-SDLTKIICRPGQKLTEPQVKC 215
RE+ I+ L+HPN++KL GL M +V +F+ DL + +
Sbjct: 71 QREVFIMSNLNHPNIVKLYGL----MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 216 YMQQLLSGLQHCHERG--ILHRDIKASNLL---IDKSGML--KIADFGLSNFFIPKQKGP 268
M + G+++ + I+HRD+++ N+ +D++ + K+ADF LS + G
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL 186
Query: 269 LTSRVVTLWYRAPELLLGSTD-YGVGIDLWSAGCLLAEMFIGRPLMPGRTEVEQLHRIFK 327
L + + APE + + Y D +S +L + G
Sbjct: 187 LGN----FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE----------------- 225
Query: 328 LCGTPSEDYWKKMKLTTTFRPQHYKPSFREVFGEFPPSSYGILTTLLALDPAYR 381
G E + K+K R + +P+ E + PP ++ + DP R
Sbjct: 226 --GPFDEYSYGKIKFINMIREEGLRPTIPE---DCPPRLRNVIELCWSGDPKKR 274
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q + L + D+++ I Q L + Q+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 129
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFG + ++K +V W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 190 LESIL--HRIYTHQSDVWSYGVTVWELM 215
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 135/338 (39%), Gaps = 55/338 (16%)
Query: 104 LVPKSAD----SYDKLAKVGQGTYSNVYKARDRDTG-KIVALKKVRFDTSEPESVKFMAR 158
L+ +S D Y+ + +G+G + V + D G + VA+K V+ E+ +
Sbjct: 4 LICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAAR---S 60
Query: 159 EIRILQKLD--HPNVI--KLEGLATSRMQYSLYLVFDFMQSDLTKIICRPG-QKLTEPQV 213
EI++L+ L+ PN ++ L + +VF+ + I G +
Sbjct: 61 EIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 214 KCYMQQLLSGLQHCHERGILHRDIKASNLLIDKSGM-------------------LKIAD 254
+ Q+ + H + H D+K N+L +S +K+ D
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 255 FGLSNFFIPKQKGPLTSRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFIGRPLMP 314
FG + + ++ V T YRAPE++L + + D+WS GC+L E ++G + P
Sbjct: 181 FGSATY----DDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFP 235
Query: 315 GRTEVEQLHRIFKLCGTPSEDYWKKMKLTTTFRP-----QHYKPSFREV------FGEFP 363
E L + ++ G + +K + F + + R V EF
Sbjct: 236 THDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFM 295
Query: 364 PSS-------YGILTTLLALDPAYRGTAASALQNEFFN 394
S + ++ +L DPA R T AL++ FF+
Sbjct: 296 LSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 112 YDKLAKVGQGTYSNVYKAR---DRDTGKI-VALKKVRFDTSEPESVKFMAREIRILQKLD 167
+ K+ +G G + VYK + + KI VA+K++R TS P++ K + E ++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD 77
Query: 168 HPNVIKLEGLA-TSRMQYSLYL-----VFDFMQSDLTKIICRPGQKLTEPQVKCYMQQLL 221
+P+V +L G+ TS +Q + L + D+++ I Q L + Q+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLN-----WCVQIA 129
Query: 222 SGLQHCHERGILHRDIKASNLLIDKSGMLKIADFGLSNFFIPKQK--GPLTSRVVTLWYR 279
G+ + +R ++HRD+ A N+L+ +KI DFG + ++K +V W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 280 APELLLGSTDYGVGIDLWSAGCLLAEMF 307
+L Y D+WS G + E+
Sbjct: 190 LESIL--HRIYTHQSDVWSYGVTVWELM 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,811,787
Number of Sequences: 62578
Number of extensions: 502594
Number of successful extensions: 4227
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 1162
length of query: 469
length of database: 14,973,337
effective HSP length: 102
effective length of query: 367
effective length of database: 8,590,381
effective search space: 3152669827
effective search space used: 3152669827
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)