BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036679
DSPTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLS
KFMVRNEDRLARVSICGPNVRLVDISSLHAPCGINVALCKNLKELKLFKLSITNEWLCNQ
FSELPFLEYLEIFRCMKIRSIKISSPYLKKLLVRFCNKLYEFKLDTPNLSVFDYEGDMVS
FSSNALALSETSLCLDSINVDNQWLVKFIELLAKLNHCSNVLNLECYAAAIIPRELREIL
SSPLTYENHVCFIINSEYNTFSLAKLLDSLLWISPHAETLSIKCNDCDHEFCFQ

High Scoring Gene Products

Symbol, full name Information P value
AT3G03360 protein from Arabidopsis thaliana 2.2e-09
AT5G03100 protein from Arabidopsis thaliana 0.00010
AT3G18150 protein from Arabidopsis thaliana 0.00019
AT5G02700 protein from Arabidopsis thaliana 0.00035
AT5G02920 protein from Arabidopsis thaliana 0.00076

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036679
        (294 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2099644 - symbol:AT3G03360 species:3702 "Arabi...   163  2.2e-09   1
TAIR|locus:2143463 - symbol:AT5G03100 "AT5G03100" species...   119  0.00010   1
TAIR|locus:2092737 - symbol:AT3G18150 "AT3G18150" species...   109  0.00019   2
TAIR|locus:2151316 - symbol:AT5G02700 "AT5G02700" species...   117  0.00035   1
TAIR|locus:2151246 - symbol:AT5G02920 "AT5G02920" species...   110  0.00076   1


>TAIR|locus:2099644 [details] [associations]
            symbol:AT3G03360 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001810 Pfam:PF00646
            PROSITE:PS50181 SMART:SM00256 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF81383 EMBL:AC009895
            HOGENOM:HOG000097837 EMBL:BT004131 EMBL:AK318807 EMBL:AK229563
            EMBL:AK229911 IPI:IPI00527984 IPI:IPI00845135 IPI:IPI00944252
            RefSeq:NP_186986.1 UniGene:At.48615 UniGene:At.74916
            ProteinModelPortal:Q84W80 SMR:Q84W80 PRIDE:Q84W80
            EnsemblPlants:AT3G03360.1 GeneID:821272 KEGG:ath:AT3G03360
            TAIR:At3g03360 eggNOG:NOG316608 InParanoid:Q84W80 OMA:ADIDSWI
            PhylomeDB:Q84W80 ProtClustDB:CLSN2913395 Genevestigator:Q84W80
            Uniprot:Q84W80
        Length = 481

 Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 37/150 (24%), Positives = 75/150 (50%)

Query:     2 SPTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSK 61
             +P  +V+ +SL+ L L+ C  +DE+I  I++GCP++E L +  C+ LK L+     +L  
Sbjct:   179 NPKCSVSWTSLKNLSLYHCNISDESIAIILSGCPILESLLLFFCKKLKVLDLSKSPRLIT 238

Query:    62 FMVRNEDRLARVSICGPNVRLVDISSLHAPCGINVALCKNLKELKLFKLSITNEWLCNQF 121
               +    R+    +  P++R + + +   PC +      +  EL +   +I +  L   F
Sbjct:   239 LEITRRCRMEPTQLVAPHIRCLRLINSEKPCALVDVSSLSQAELDITAYAIVDNKLEADF 298

Query:   122 SELPFLEYLEIFRCMKIRSIKISSPYLKKL 151
              +   ++ LE  +C  +  + + + +LK L
Sbjct:   299 HQTMVVKMLE--KCQNVEKLTLGANFLKML 326


>TAIR|locus:2143463 [details] [associations]
            symbol:AT5G03100 "AT5G03100" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF81383
            EMBL:AB005240 EMBL:AL163002 EMBL:BT022002 EMBL:BT026075
            IPI:IPI00541785 PIR:T48331 RefSeq:NP_195930.2 UniGene:At.50422
            ProteinModelPortal:Q501G5 SMR:Q501G5 PRIDE:Q501G5
            EnsemblPlants:AT5G03100.1 GeneID:831808 KEGG:ath:AT5G03100
            TAIR:At5g03100 eggNOG:NOG286443 HOGENOM:HOG000097837
            InParanoid:Q501G5 OMA:EIDTWIN PhylomeDB:Q501G5
            ProtClustDB:CLSN2918611 Genevestigator:Q501G5 Uniprot:Q501G5
        Length = 307

 Score = 119 (46.9 bits), Expect = 0.00010, P = 0.00010
 Identities = 40/158 (25%), Positives = 72/158 (45%)

Query:     2 SPTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSK 61
             +P   V+ SSLR L L +C  +D++I  I+ GC L+E L +  C  L  L+      L +
Sbjct:   139 NPKCVVSWSSLRNLSLNRCKVSDDSIAKILTGCSLLESLTLNLCDRLNDLDLSKSLSLRR 198

Query:    62 FMVRNEDRLARVSICGPNVRLVDISSLHAPCGINVALCKNLKELKL-FKLSITNEWLCNQ 120
               +   DR     I  P++R + + +   P  + V +  +L E  L     + + + C  
Sbjct:   199 LEILG-DRWTPERIVAPHIRYLRLENYQRPSTL-VDV-SSLTEANLGLSKHVLDYFTCEM 255

Query:   121 FSE-LPFLEYLEIFRCMKIRSIKISSPYLKKL-LVRFC 156
              +E L ++    + +   I+ + I   +L+ L L   C
Sbjct:   256 ETESLQYMVRQTVVKLQNIKKLTIGGIFLQILSLAELC 293


>TAIR|locus:2092737 [details] [associations]
            symbol:AT3G18150 "AT3G18150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
            SUPFAM:SSF81383 EMBL:AB020749 IPI:IPI00544874 RefSeq:NP_188443.2
            UniGene:At.74522 ProteinModelPortal:Q9LV26 SMR:Q9LV26 PaxDb:Q9LV26
            PRIDE:Q9LV26 EnsemblPlants:AT3G18150.1 GeneID:821341
            KEGG:ath:AT3G18150 TAIR:At3g18150 eggNOG:NOG295494 OMA:NTIRKEY
            PhylomeDB:Q9LV26 Genevestigator:Q9LV26 Uniprot:Q9LV26
        Length = 456

 Score = 109 (43.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 35/146 (23%), Positives = 70/146 (47%)

Query:    12 LRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKFMVRNE---D 68
             L++L L  C  +DE++ +I+ GCP++E L +  C GL+ L+     +L    +       
Sbjct:   170 LKKLYLSTCLLSDESMANILFGCPILESLTLDHCGGLRVLDLSKSLRLRTLEINCNIWVP 229

Query:    69 RLARVSICGPNVRLVDISSLHAPCGINVALCKNLKELKL-FKLSITNEWLCNQFSELPFL 127
              L  + I  P+   + + +   PC + V +  +LKE KL   +   ++ +   F ++  L
Sbjct:   230 ELTAMQIVAPHTHCLRLRNSKLPCSL-VDV-SSLKEAKLNICIDSFSKTIKADFLQVTLL 287

Query:   128 EYLEIFRCMKIRSIKISSPYLKKLLV 153
             + LE  +   +  + +   +L+ L V
Sbjct:   288 KMLE--KLHNVEKLTLGGNFLQILSV 311

 Score = 51 (23.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 25/80 (31%), Positives = 42/80 (52%)

Query:   138 IRSIKISSPYLKKL--LVR-FCNKLYEFKLDTPNLSVFDYEGDMVSFSSNALALSETSLC 194
             I  +  +SP LKKL  L + F +K  E+  D  +L  F+   D    S   +  +++  C
Sbjct:   341 IERVLQNSPDLKKLTLLTKDFYHKPGEYLGDHMDLEGFNL--DQCWKSKYGVFWNKS--C 396

Query:   195 LDSINVDNQWLVKFIELLAK 214
             LD   V+++ +V F+EL+ K
Sbjct:   397 LD---VESEHVVSFVELMLK 413

 Score = 47 (21.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query:   168 NLSVFDYEGD-MVSFSSNALALSETSLCLDSINV--DNQWLVKFIELLAKLNHCSNV 221
             N S  D E + +VSF    L L  T   LD + V  ++ + V+F E++ +L+H  N+
Sbjct:   393 NKSCLDVESEHVVSFVE--LMLKNTK-ALDKMVVLLEDHY-VRFKEMVPRLSHNYNI 445


>TAIR|locus:2151316 [details] [associations]
            symbol:AT5G02700 "AT5G02700" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
            SUPFAM:SSF81383 EMBL:AL162973 HOGENOM:HOG000097837 eggNOG:NOG278966
            IPI:IPI00541116 PIR:T48291 RefSeq:NP_195890.1 UniGene:At.54690
            ProteinModelPortal:Q9LZ15 SMR:Q9LZ15 EnsemblPlants:AT5G02700.1
            GeneID:831837 KEGG:ath:AT5G02700 TAIR:At5g02700 InParanoid:Q9LZ15
            OMA:LHINIAP PhylomeDB:Q9LZ15 ProtClustDB:CLSN2684081
            Genevestigator:Q9LZ15 Uniprot:Q9LZ15
        Length = 456

 Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
 Identities = 29/93 (31%), Positives = 48/93 (51%)

Query:     3 PTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKF 62
             PT  V+  SLR L L  C   DE+I +I++GCP++E L +  CR L+ L+      L + 
Sbjct:   161 PTCTVSWKSLRNLTLRFCQIPDESIHNILSGCPILESLTLDTCRLLERLDLSKSPNLRRL 220

Query:    63 MVRNE-DRLARVSICGPNVRLVDISSLHAPCGI 94
              +  +  R   V+I  P++  + ++    P  I
Sbjct:   221 DINQQYRRTGPVAIVAPHIYYLRLTYSSTPSTI 253


>TAIR|locus:2151246 [details] [associations]
            symbol:AT5G02920 "AT5G02920" species:3702 "Arabidopsis
            thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
            EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF81383
            EMBL:AL162973 HOGENOM:HOG000097837 EMBL:DQ446914 IPI:IPI00525957
            PIR:T48313 RefSeq:NP_568109.2 UniGene:At.54694
            ProteinModelPortal:Q1PE04 SMR:Q1PE04 EnsemblPlants:AT5G02920.1
            GeneID:831396 KEGG:ath:AT5G02920 TAIR:At5g02920 eggNOG:NOG250366
            InParanoid:Q1PE04 OMA:EIERRSC PhylomeDB:Q1PE04
            Genevestigator:Q1PE04 Uniprot:Q1PE04
        Length = 258

 Score = 110 (43.8 bits), Expect = 0.00076, P = 0.00076
 Identities = 24/95 (25%), Positives = 50/95 (52%)

Query:     2 SPTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSK 61
             +P+  V+ +SLR+L L +C  +D++   I++GCP++E L +  C  LK L+     +L++
Sbjct:   160 TPSCIVSWTSLRDLSLTRCNLSDKSFLKILSGCPILESLSLKFCESLKYLDLSKSLRLTR 219

Query:    62 FMVRNE----DRLARVSICGPNVRLVDISSLHAPC 92
               +       + +  + I  P++  + +    A C
Sbjct:   220 LEIERRSCFREPMQSMQIVAPHIHYLRLRDSEAHC 254


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      294       294   0.00091  115 3  11 22  0.46    33
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  220 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.82u 0.13s 24.95t   Elapsed:  00:00:01
  Total cpu time:  24.82u 0.13s 24.95t   Elapsed:  00:00:01
  Start:  Fri May 10 01:11:10 2013   End:  Fri May 10 01:11:11 2013

Back to top