BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036679
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84W80|FBL42_ARATH F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana
GN=At3g03360 PE=2 SV=2
Length = 481
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 3 PTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKF 62
P +V+ +SL+ L L+ C +DE+I I++GCP++E L + C+ LK L+ +L
Sbjct: 180 PKCSVSWTSLKNLSLYHCNISDESIAIILSGCPILESLLLFFCKKLKVLDLSKSPRLITL 239
Query: 63 MVRNEDRLARVSICGPNVRLVDISSLHAPCGINVALCKNLKELKLFKLSITNEWLCNQFS 122
+ R+ + P++R + + + PC + + EL + +I + L F
Sbjct: 240 EITRRCRMEPTQLVAPHIRCLRLINSEKPCALVDVSSLSQAELDITAYAIVDNKLEADFH 299
Query: 123 ELPFLEYLEIFRCMKIRSIKISSPYLKKL 151
+ ++ LE +C + + + + +LK L
Sbjct: 300 QTMVVKMLE--KCQNVEKLTLGANFLKML 326
>sp|Q9LZ15|FBL78_ARATH Putative F-box/LRR-repeat protein At5g02700 OS=Arabidopsis thaliana
GN=At5g02700 PE=4 SV=1
Length = 456
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 3 PTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKF 62
PT V+ SLR L L C DE+I +I++GCP++E L + CR L+ L+ L +
Sbjct: 161 PTCTVSWKSLRNLTLRFCQIPDESIHNILSGCPILESLTLDTCRLLERLDLSKSPNLRRL 220
Query: 63 MVRNE-DRLARVSICGPNVRLVDISSLHAPCGI 94
+ + R V+I P++ + ++ P I
Sbjct: 221 DINQQYRRTGPVAIVAPHIYYLRLTYSSTPSTI 253
>sp|Q9LSJ3|FBL48_ARATH Putative F-box/LRR-repeat protein At3g28410 OS=Arabidopsis thaliana
GN=At3g28410 PE=4 SV=2
Length = 465
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 3 PTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKF 62
PT V+ SLR L L C DE++ +I++GCP++E L + CR L+ L+ L +
Sbjct: 162 PTCAVSWKSLRNLTLRFCQIPDESMHNILSGCPILESLTLDTCRLLERLDLSKSPNLRRL 221
Query: 63 MV-RNEDRLARVSICGPNVRLVDISSLHAPCGI 94
+ R R ++I P++ + ++ P I
Sbjct: 222 DINRQYRRTGPIAIVAPHIYYLRLTYSSTPSTI 254
>sp|Q1PE04|FBL25_ARATH F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana GN=FBL25 PE=2
SV=1
Length = 258
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 2 SPTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSK 61
+P+ V+ +SLR+L L +C +D++ I++GCP++E L + C LK L+ +L++
Sbjct: 160 TPSCIVSWTSLRDLSLTRCNLSDKSFLKILSGCPILESLSLKFCESLKYLDLSKSLRLTR 219
Query: 62 FMVRN----EDRLARVSICGPNVRLVDISSLHAPCGINV 96
+ + + + I P++ + + A C V
Sbjct: 220 LEIERRSCFREPMQSMQIVAPHIHYLRLRDSEAHCTFLV 258
>sp|O80741|FB351_ARATH Probable F-box protein At1g60180 OS=Arabidopsis thaliana
GN=At1g60180 PE=4 SV=1
Length = 322
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 3 PTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKF 62
P +V+ +SL++L L C +DE I I++GCP++E L + C L L+ +L
Sbjct: 29 PRCSVSWTSLKKLSLRFCELSDECIAKILSGCPILESLTLSHCIYLTVLDLSKSLRLRTL 88
Query: 63 MVR-NEDRLARVSICGPNVRLVDISSLHAPCGI 94
+ N D I P++ + + + +PC +
Sbjct: 89 EIACNIDNTRPRQIVAPHIHRLRLKTYQSPCAL 121
>sp|Q501G5|FB250_ARATH F-box protein At5g03100 OS=Arabidopsis thaliana GN=At5g03100 PE=2
SV=1
Length = 307
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 7 VTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKFMVRN 66
V+ SSLR L L +C +D++I I+ GC L+E L + C L L+ L + +
Sbjct: 144 VSWSSLRNLSLNRCKVSDDSIAKILTGCSLLESLTLNLCDRLNDLDLSKSLSLRRLEILG 203
Query: 67 EDRLARVSICGPNVRLVDISSLHAPCGI 94
DR I P++R + + + P +
Sbjct: 204 -DRWTPERIVAPHIRYLRLENYQRPSTL 230
>sp|Q9LYZ2|FBL80_ARATH Putative F-box/LRR-repeat protein At5g02930 OS=Arabidopsis thaliana
GN=At5g02930 PE=4 SV=1
Length = 469
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 7 VTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGK 58
V+ +SL+ L L C +DE+ +I++GCP++E L + C LK +LNL K
Sbjct: 166 VSWTSLKNLSLTDCTMSDESFLEILSGCPILESLSLKFCMSLK---YLNLSK 214
>sp|Q9LV26|FBL45_ARATH Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana
GN=At3g18150 PE=4 SV=2
Length = 456
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 12 LRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKFMVRNE---D 68
L++L L C +DE++ +I+ GCP++E L + C GL+ L+ +L +
Sbjct: 170 LKKLYLSTCLLSDESMANILFGCPILESLTLDHCGGLRVLDLSKSLRLRTLEINCNIWVP 229
Query: 69 RLARVSICGPNVRLVDISSLHAPCGINVALCKNLKELKL 107
L + I P+ + + + PC + +LKE KL
Sbjct: 230 ELTAMQIVAPHTHCLRLRNSKLPCSL--VDVSSLKEAKL 266
>sp|Q0WR05|FBL39_ARATH F-box/LRR-repeat protein At2g42730 OS=Arabidopsis thaliana
GN=At2g42730 PE=2 SV=1
Length = 457
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 121 FSELPFLEYL--EIFRCMKIRSIKISSPYLKKLLVRFCNKLYEFKLDTPNLSVFDYEGDM 178
S P LE L E RC+ + +SSP LK+L +RF K LD PNL + + G +
Sbjct: 186 ISRCPVLEELVVEERRCVDW-TCSVSSPSLKRLHIRFDRKFTSISLDAPNLIYYKHSGYV 244
Query: 179 VSFSSNA-----------LALSETSLC------LDSINVDNQWLVKFIELLAKLNHCSNV 221
+ N L + ET + L SI D + L+ I + L+ S+
Sbjct: 245 LGKYPNVKLDSLIEARLNLRMDETRMVGVRNGSLGSIPADMRNLINGIRNVRILHLSSHT 304
Query: 222 LNLECYAAAIIP 233
L L ++ +P
Sbjct: 305 LELLYFSCKEMP 316
>sp|Q9S9V9|FBL23_ARATH Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana
GN=FBL23 PE=4 SV=1
Length = 449
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Query: 101 NLKELKLFK-LSITNEWLCNQFSELPFLEYLEIFRCM----KIRSIKISSPYLKKLLVRF 155
NLK L L + IT+E + S++P LEYLE+ C+ +R I S P LK L
Sbjct: 278 NLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTL---- 333
Query: 156 CNKLYEFKLDTPNLSVFDYEGDMVSFSSNALALSET 191
KL+ +F G F NA A++E+
Sbjct: 334 -------KLNRAPEIMFSNSG----FDDNAKAIAES 358
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 31/141 (21%)
Query: 10 SSLRELGLFKC-AANDEAIRDIVAGCPLIERLKIIDC-----------RGLKSLEFLNLG 57
S+L+ LGL +C DE + V+ PL+E L++ C R +L+ L L
Sbjct: 277 SNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLN 336
Query: 58 KLSKFMVRNEDRLARVSICGPNVRLVDISSLHAPCGINVALCKNLKELKLFKLSITNEWL 117
+ + M N S N + + S L+ L+L +TN+ L
Sbjct: 337 RAPEIMFSN-------SGFDDNAKAIAES------------MPELRHLQLLGNGLTNKGL 377
Query: 118 CNQFSELPFLEYLEIFRCMKI 138
P LE+L++ +C I
Sbjct: 378 NAILDGCPHLEHLDLRQCFNI 398
>sp|Q8W3K0|DRL9_ARATH Probable disease resistance protein At1g58602 OS=Arabidopsis
thaliana GN=At1g58602 PE=2 SV=1
Length = 1138
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 27/135 (20%)
Query: 32 AGCPLIERLKIIDCRGLKSLEFLNLGKLSKFMVRNEDRLARVSI--CG-----PNV-RLV 83
+ PL+ L I DCR LK L +L L +S+ CG P + RLV
Sbjct: 845 SSMPLLLTLNIFDCRKLKQLPDEHL----------PSHLTAISLKKCGLEDPIPTLERLV 894
Query: 84 DIS--SLHAPCGINVALCKN-----LKELKLFKLSITNEWLCNQFSELPFLEYLEIFRCM 136
+ SL CG + +C L +L L +L EW+ S +P L LEI RC+
Sbjct: 895 HLKELSLSELCG-RIMVCTGGGFPQLHKLDLSELDGLEEWIVEDGS-MPRLHTLEIRRCL 952
Query: 137 KIRSIKISSPYLKKL 151
K++ + P L+ L
Sbjct: 953 KLKKLPNGFPQLQNL 967
>sp|Q9FX89|FB50_ARATH Putative F-box protein At1g49610 OS=Arabidopsis thaliana
GN=At1g49610 PE=4 SV=2
Length = 385
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 3 PTRNVTLSSLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLE 52
P +V+ SSL +L LF +DE+I I++GCP+IE L + C L L+
Sbjct: 159 PRCSVSWSSLTKLSLF----SDESIAKILSGCPIIESLTLHFCDQLMVLD 204
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 34.7 bits (78), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 11 SLRELGLFKCAANDEAIRDIV---AGCPLIERLKIIDCRGLKSLEFLNLGKLSKFMVRNE 67
SL+E+ L C + ++ I GCP+++ L + +C L ++ F N
Sbjct: 552 SLQEVDLSDCESLSNSVCKIFSDDGGCPMLKSLILDNCESLTAVRFCN------------ 599
Query: 68 DRLARVSICGPNVRLVDISSLHAPCGINVAL--CKNLKELKLFK---LSITNEWLCNQFS 122
LA +S+ G R V L P + L C +L E F+ L N +C + S
Sbjct: 600 SSLASLSLVG--CRAVTSLELKCPRIEQICLDGCDHL-ETAFFQPVALRSLNLGICPKLS 656
Query: 123 ----ELPFLEYLEIFRCMKIRSIKISSPYLKKLLVRFCNKLYE 161
E P++ LE+ C + I P L L FC++L +
Sbjct: 657 VLNIEAPYMVSLELKGCGVLSEASIMCPLLTSLDASFCSQLRD 699
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 24/168 (14%)
Query: 24 DEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKL-SKFMVRNEDRLARVSICGPNVRL 82
D AIR CP +E L + +C + + + + + N +S+ ++ +
Sbjct: 384 DAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHILNASYCPNISLESVHLPM 443
Query: 83 VDISSLHAPCGINVALCKNLKELKLFKLSITNEWLCNQFSELPFLEYLEIFRCMKIRSIK 142
+ + LH+ GI A S+T W+ N P LE LE+ C + ++
Sbjct: 444 LTVLKLHSCEGITSA-------------SMT--WIANS----PALEVLELDNCNLLTTVS 484
Query: 143 ISSPYLKKLLVRFCNKLYEFKLDTPNLSVFDYEG----DMVSFSSNAL 186
+ L+ + + C K + L + LS ++ +SNAL
Sbjct: 485 LHLSRLQSISLVHCRKFTDLNLQSIMLSSITVSNCPALRRITITSNAL 532
>sp|Q5S4V7|FB129_ARATH F-box protein At2g39490 OS=Arabidopsis thaliana GN=At2g39490 PE=2
SV=1
Length = 387
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 111 SITNEWLCNQFSELPFLEYLEIFRCMKIRSIKISSPY-LKKLLVRFCNKLYEFKLDTPNL 169
S+T+E + + E L+ L+I RC ++ S+ I SP L L + C KL ++ + L
Sbjct: 150 SLTHEVVSSMVLEFSLLDSLKICRCKRLTSLTIDSPTKLLHLSISGCPKLRYLEIISFKL 209
Query: 170 SVFDYEGDM 178
F Y+G +
Sbjct: 210 KTFHYQGSL 218
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 25/256 (9%)
Query: 12 LRELGLFKCA-ANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLG----KLSKFMVRN 66
L+EL L C +D A+R + CP +E L + C+ + NLG KL+ + N
Sbjct: 125 LKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLEN 184
Query: 67 ----EDRLARVSICG-PNVRLVDISSLHA--PCGINVAL--CKNLKELKLFKL-SITNEW 116
DR + G PN+ ++IS A G+ + L CK+L L L +T
Sbjct: 185 CSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILRGCEGLTENV 244
Query: 117 LCNQFSELPFLEYLEIFRCMKIRSIKI-----SSPYLKKLLVRFCNKLYEFKL-----DT 166
+ + + ++ L + +C ++ I + + L+ L + CN++ + L +
Sbjct: 245 FGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHS 304
Query: 167 PNLSVFDYEGDMVSFSSNALALSETSLCLDSINVDNQWLVKFIELLAKLNHCSNVLNLEC 226
NL V + G + + + L+ L+ +++++ L+ + + N+C+ + L
Sbjct: 305 HNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELSL 364
Query: 227 YAAAIIPRELREILSS 242
+I E + L+S
Sbjct: 365 SHCELITDESIQNLAS 380
>sp|Q8RWU5|FBL3_ARATH F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana GN=FBL3 PE=2
SV=1
Length = 665
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 21/154 (13%)
Query: 11 SLRELGLFKCA-ANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKFMVRNEDR 69
SL++L C + +++G ++RL + C + SL+F + L K R
Sbjct: 253 SLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFAS--SLKKVSALQSIR 310
Query: 70 LARVSICGPNVRLVDISSLHAPCGINVALCKNLKELKLFK-LSITNEWLCNQFSELPFLE 128
L S+ ++ + LC +LKE+ L K +S+T+E L + +L L
Sbjct: 311 LDGCSVTPDGLKAIG------------TLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLR 358
Query: 129 YLEIFRCMKIRSIKI-----SSPYLKKLLVRFCN 157
L+I C K+ + I S P L L + C+
Sbjct: 359 KLDITCCRKLSRVSITQIANSCPLLVSLKMESCS 392
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 12 LRELGLFKCAA-NDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGK----LSKFMVRN 66
L+EL L C + A+++I GC +E L ++DC G+ + ++ K L K +R
Sbjct: 374 LKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRR 433
Query: 67 EDRLAR---VSICGPNVRLVDISSLHAPCGINVALCKNLKELKLFKLSITNEWLCNQFSE 123
+ +SI L ++S N AL K L +L+++ CNQ S+
Sbjct: 434 CYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSG---CNQISD 490
Query: 124 L---------PFLEYLEIFRCMKIRSIKISS-----PYLKKLLVRFCNKLYEFKLD 165
P L +L+I I + ++ P LK L++ C+ + + L+
Sbjct: 491 AGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLN 546
>sp|Q8LF09|FDL23_ARATH F-box/FBD/LRR-repeat protein At4g00160 OS=Arabidopsis thaliana
GN=At4g00160 PE=2 SV=2
Length = 453
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 7 VTLSSLRELGLFKCAANDEA-IRDIVAGCPLIERLKIIDCRGLKS-LEFLNLGKLS--KF 62
V + SLR L L + DE+ IR++++GCP++E L +I RG S +E + ++ K
Sbjct: 163 VVMKSLRTLHLELVSYKDESSIRNLLSGCPILEELLVI--RGEDSDIEVFTIDEVPSLKR 220
Query: 63 MVRNEDRLAR----VSICGPNVRLVDISSLHAPCGINVALCKNLKEL 105
+ N+D + I P+++ + I L P C N EL
Sbjct: 221 LTINDDHDGQEFWGYVINAPSLKYLLIEDLRCP-----GFCLNAPEL 262
>sp|Q9S9X4|FBL8_ARATH Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8
PE=4 SV=1
Length = 554
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 11 SLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGLKSLEFLNLGKLSKFMVRNED 68
+LR+L + C D+ I+ + GCP + ++K+ CRG+ + L K +V N D
Sbjct: 422 ALRKLCIKNCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRRALLVVNLD 479
>sp|Q0WRC9|SKI17_ARATH F-box protein SKIP17 OS=Arabidopsis thaliana GN=SKIP17 PE=1 SV=1
Length = 479
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 96 VALCKNLKELKLFKLSITNEWLCNQFSELPFLEYLEIFRCMKIR-------SIKISSPYL 148
V C NL L L + +T++W N L+YL + R I+ + L
Sbjct: 281 VTNCPNLTSLTLIRFGLTDDWARNLAESCRKLKYLNLSRSPTIKGRFLRELGLSCKENLL 340
Query: 149 KKLLVRFCNKLYE 161
K L++R C KL E
Sbjct: 341 KTLILRSCPKLQE 353
>sp|Q9C626|FB37_ARATH F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2
SV=1
Length = 518
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 11 SLRELGLFKCAANDEAIRDIVAGCPLIERLKIIDCRGL 48
+LR+L + C +D I ++ GCP + ++KI C+G+
Sbjct: 389 ALRKLCIKNCPISDVGIENLANGCPGLTKVKIKKCKGV 426
>sp|Q9M1Q1|FB215_ARATH F-box protein At3g62230 OS=Arabidopsis thaliana GN=At3g62230 PE=1
SV=1
Length = 461
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 115 EWLCNQFSELPFLEYLEIFRCMKIR--SIKISSPYLKKLLVRFCN-KLYEFKLDTPNLSV 171
E L ++ P LE L I C +I +I + L KL+ ++C+ + LD PN+ +
Sbjct: 189 EMLSALIAKTPLLEILNIKNCWEIGLDAITGYNDRLMKLVFKYCSFSAQQTTLDVPNIQI 248
Query: 172 FDYEGDMVSF---SSNAL 186
F Y G + F S+N L
Sbjct: 249 FKYFGKVYRFEFASANKL 266
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,916,623
Number of Sequences: 539616
Number of extensions: 3798489
Number of successful extensions: 10739
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 10677
Number of HSP's gapped (non-prelim): 95
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)