BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036685
(245 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 122/235 (51%), Gaps = 27/235 (11%)
Query: 22 DGTVERLAGTEVAAAGLDPATN--VLSKDVLILPETGVSARVYRPGNI---TNKLPLVVY 76
D T+ R AA DP ++ VL+KD+ + P R++ P + + KLPLVVY
Sbjct: 29 DRTITRPIQIPSTAASPDPTSSSPVLTKDLALNPLHNTFVRLFLPRHALYNSAKLPLVVY 88
Query: 77 FHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDSLGALKWVAS 136
FHGG F++ S+A +H + A +++ SV+YRLAPEH LPAA++D++ AL+W+
Sbjct: 89 FHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWIKD 148
Query: 137 HAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLR---IKDEVRDLK 193
+++ WL F DF F+ G+SAG +IA++ GLR + DE+ LK
Sbjct: 149 ---------------SRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLK 193
Query: 194 VLGIVMIMPYFWGKKPIGVEVT----DQFRKQMVDNWWLFVCPSDKGCDDPLINP 244
+ G+V+ P F G K G E+ + ++D W P D NP
Sbjct: 194 IKGLVLDEPGFGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNP 248
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 43/248 (17%)
Query: 22 DGTVERLAGTEV---AAAGLDPATNVLSKDVLILPETGVSARVYRPGNITNK-------- 70
DGT R + A +P V S DVLI + +RVYRP +
Sbjct: 45 DGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDL 104
Query: 71 --------LPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPA 122
+P++++FHGG+F +S+ Y T LV ++VSVNYR APE+P P
Sbjct: 105 EKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPC 164
Query: 123 AFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFD-KVFLAGDSAGSSIAHYL 181
A++D AL WV N +WL+ D +FLAGDS+G +IAH +
Sbjct: 165 AYDDGWIALNWV-----------------NSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207
Query: 182 GLRIKDEVRDLKVLGIVMIMPYFWGKKPIGVEVTDQFRKQMV----DNWWLFVCPSDKGC 237
LR + + VLG +++ P F G + E + + + D +W P +
Sbjct: 208 ALRAGES--GIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDR 265
Query: 238 DDPLINPL 245
+ P NP
Sbjct: 266 EHPACNPF 273
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 110/261 (42%), Gaps = 62/261 (23%)
Query: 22 DGTVERLAGTEV---AAAGLDPATNVLSKDVLILPETGVSARVYRPGN------------ 66
DGT ER G + A P V S D +I G+ R+YR
Sbjct: 37 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVT 96
Query: 67 -----------ITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLA 115
P++++FHGG+FV +S++ Y + V + ++VSVNYR A
Sbjct: 97 RPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRA 156
Query: 116 PEHPLPAAFEDSLGALKWVASH--AKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSA 173
PEH P A++D ALKWV S + GD +VFL+GDS+
Sbjct: 157 PEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQA------------------RVFLSGDSS 198
Query: 174 GSSIAHYLGLRIKDEVRDLKVLGIVMIMPYFWGKKPIGVEVTDQFRK---------QMVD 224
G +IAH++ +R DE +KV G +++ F G E T+ R+ Q D
Sbjct: 199 GGNIAHHVAVRAADE--GVKVCGNILLNAMFG-----GTERTESERRLDGKYFVTLQDRD 251
Query: 225 NWWLFVCPSDKGCDDPLINPL 245
+W P D D P NP
Sbjct: 252 WYWKAYLPEDADRDHPACNPF 272
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 50 LILPETG--VSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIL 107
+ +P G + ARVYRP + +LP VVY+HGG FV+ S + L + ++
Sbjct: 54 ITIPGRGGPIRARVYRPRD-GERLPAVVYYHGGGFVLGSVE--THDHVCRRLANLSGAVV 110
Query: 108 VSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVF 167
VSV+YRLAPEH PAA ED+ A KWVA + G NG K+
Sbjct: 111 VSVDYRLAPEHKFPAAVEDAYDAAKWVADNYDKLGVDNG------------------KIA 152
Query: 168 LAGDSAGSSIAHYLGLRIKDE 188
+AGDSAG ++A + +D
Sbjct: 153 VAGDSAGGNLAAVTAIMARDR 173
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 26/136 (19%)
Query: 46 SKDVLILPETG--VSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAE- 102
++DV I P +G + ARVY P LP V+Y+HGG FV S + H + ++
Sbjct: 48 TRDVHI-PVSGGSIRARVYFPKKAAG-LPAVLYYHGGGFVFGSI---ETHDHICRRLSRL 102
Query: 103 ADIILVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVD 162
+D ++VSV+YRLAPE+ P A ED+ ALKWVA A G VD
Sbjct: 103 SDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELG------------------VD 144
Query: 163 FDKVFLAGDSAGSSIA 178
D++ +AGDSAG ++A
Sbjct: 145 PDRIAVAGDSAGGNLA 160
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 23/132 (17%)
Query: 72 PLVVYFHGGAFVIASSADPKYHTSLNNLVAE-ADIILVSVNYRLAPEHPLPAAFEDSLGA 130
P++VY+HGG FVI S H +L +A ++ +VSV+YRLAPEH PAA D A
Sbjct: 80 PVLVYYHGGGFVICSIES---HDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDA 136
Query: 131 LKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVR 190
KWVA +A+ LR +D K+F+ GDSAG ++A + + +D
Sbjct: 137 TKWVAENAEE----------------LR--IDPSKIFVGGDSAGGNLAAAVSIMARDSGE 178
Query: 191 DLKVLGIVMIMP 202
D + ++I P
Sbjct: 179 DF-IKHQILIYP 189
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 25/151 (16%)
Query: 39 DPATNVLSKDVLILPETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNN 98
+P V D + LP + R+YRP + P +VY+HGG++V+ D + H +
Sbjct: 43 EPVAEVREFD-MDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVG---DLETHDPVCR 98
Query: 99 LVA-EADIILVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWL 157
++A + ++ SV+YRLAPEH PAA ED+ AL+W+A A
Sbjct: 99 VLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAA------------------ 140
Query: 158 REF-VDFDKVFLAGDSAGSSIAHYLGLRIKD 187
+F +D ++ + GDSAG ++A + K+
Sbjct: 141 -DFHLDPARIAVGGDSAGGNLAAVTSILAKE 170
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 25/151 (16%)
Query: 39 DPATNVLSKDVLILPETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNN 98
+P V D + LP + R+YRP + P +VY+HGG +V+ D + H +
Sbjct: 43 EPVAEVREFD-MDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVG---DLETHDPVCR 98
Query: 99 LVA-EADIILVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWL 157
++A + ++ SV+YRLAPEH PAA ED+ AL+W+A A
Sbjct: 99 VLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAA------------------ 140
Query: 158 REF-VDFDKVFLAGDSAGSSIAHYLGLRIKD 187
+F +D ++ + GDSAG ++A + K+
Sbjct: 141 -DFHLDPARIAVGGDSAGGNLAAVTSILAKE 170
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 24/138 (17%)
Query: 52 LPETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVA-EADIILVSV 110
LP + R YRP + P +VY+HGG +V+ D + H + ++A + ++ SV
Sbjct: 55 LPGRTLKVRXYRPEGVEPPYPALVYYHGGGWVVG---DLETHDPVCRVLAKDGRAVVFSV 111
Query: 111 NYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREF-VDFDKVFLA 169
+YRLAPEH PAA ED+ AL+W+A A +F +D ++ +
Sbjct: 112 DYRLAPEHKFPAAVEDAYDALQWIAERAA-------------------DFHLDPARIAVG 152
Query: 170 GDSAGSSIAHYLGLRIKD 187
GDSAG ++A + K+
Sbjct: 153 GDSAGGNLAAVTSILAKE 170
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 24 TVERLAGTEVAAAGLDPATNVLSKDVLILP--ETGVSARVYRPGNITNKLPLVVYFHGGA 81
+VE + + L P V + + +P ET + ARVY P ++VY+HGG
Sbjct: 42 SVEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYP-KTQGPYGVLVYYHGGG 100
Query: 82 FVIA--SSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDSLGALKWVASHAK 139
FV+ S DP N+ + +SV+YRLAPE+ PAA DS ALKWV ++++
Sbjct: 101 FVLGDIESYDPLCRAITNS----CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSE 156
Query: 140 GEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKVLGIVM 199
G + + GDSAG ++A + K E ++K+ V+
Sbjct: 157 KFNGKYG-------------------IAVGGDSAGGNLAAVTAILSKKE--NIKLKYQVL 195
Query: 200 IMP 202
I P
Sbjct: 196 IYP 198
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 24 TVERLAGTEVAAAGLDPATNVLSKDVLILP--ETGVSARVYRPGNITNKLPLVVYFHGGA 81
+VE + + L P V + + +P ET + ARVY P ++VY+HGG
Sbjct: 42 SVEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYP-KTQGPYGVLVYYHGGG 100
Query: 82 FVIA--SSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDSLGALKWVASHAK 139
FV+ S DP N+ + +SV+YRLAPE+ PAA DS ALKWV ++++
Sbjct: 101 FVLGDIESYDPLCRAITNS----CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSE 156
Query: 140 GEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKVLGIVM 199
G + + GDSAG ++A + K E ++K+ V+
Sbjct: 157 KFNGKYG-------------------IAVGGDSAGGNLAAVTAILSKKE--NIKLKYQVL 195
Query: 200 IMP 202
I P
Sbjct: 196 IYP 198
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 24 TVERLAGTEVAAAGLDPATNVLSKDVLILP--ETGVSARVYRPGNITNKLPLVVYFHGGA 81
+VE + + L P V + + +P ET + ARVY P ++VY+HGG
Sbjct: 42 SVEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYP-KTQGPYGVLVYYHGGG 100
Query: 82 FVIA--SSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDSLGALKWVASHAK 139
FV+ S DP N+ + +SV+YRLAPE+ PAA DS ALKWV ++++
Sbjct: 101 FVLGDIESYDPLCRAITNS----CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSE 156
Query: 140 GEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKVLGIVM 199
G + + GDSAG ++A + K E ++K+ V+
Sbjct: 157 KFNGKYG-------------------IAVGGDSAGGNLAAVTAILSKKE--NIKLKYQVL 195
Query: 200 IMP 202
I P
Sbjct: 196 IYP 198
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 24 TVERLAGTEVAAAGLDPATNVLSKDVLILP--ETGVSARVYRPGNITNKLPLVVYFHGGA 81
+VE + + L P V + + +P ET + ARVY P ++VY+HGG
Sbjct: 42 SVEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYP-KTQGPYGVLVYYHGGG 100
Query: 82 FVIA--SSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDSLGALKWVASHAK 139
FV+ S DP N+ + +SV+YRLAPE+ PAA DS ALKWV +
Sbjct: 101 FVLGDIESYDPLCRAITNS----CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYN--- 153
Query: 140 GEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKVLGIVM 199
N E + ++ + + GDSAG ++A + K E ++K+ V+
Sbjct: 154 ------------NSEKFNGKY----GIAVGGDSAGGNLAAVTAILSKKE--NIKLKYQVL 195
Query: 200 IMP 202
I P
Sbjct: 196 IYP 198
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 74 VVYFHGGAFVIASSADPKYHTSLN-NLVAEADIILVSVNYRLAPEHPLPAAFEDSLGALK 132
++YFHGG ++ S P H L L ++ L S++YRLAPE+P PAA +D + A +
Sbjct: 97 ILYFHGGGYI---SGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYR 153
Query: 133 WVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDL 192
A L+ D++ +AGDSAG + L+ K++ +
Sbjct: 154 ----------------------ALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPM 191
Query: 193 KVLGIVMIMPY 203
G+VM+ P+
Sbjct: 192 PA-GLVMLSPF 201
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 74 VVYFHGGAFVIASSADPKYHTSLN-NLVAEADIILVSVNYRLAPEHPLPAAFEDSLGALK 132
++YFHGG ++ S P H L L ++ L S++YRLAPE+P PAA +D + A +
Sbjct: 83 ILYFHGGGYI---SGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYR 139
Query: 133 WVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDL 192
A L+ D++ +AGDSAG + L+ K++ +
Sbjct: 140 ----------------------ALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPM 177
Query: 193 KVLGIVMIMPY 203
G+VM+ P+
Sbjct: 178 PA-GLVMLSPF 187
>pdb|1JKM|B Chain B, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
pdb|1JKM|A Chain A, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
Length = 361
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 57 VSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLA- 115
++ V+RP + LP +VY HGG I ++ D + H +A A ++V V++R A
Sbjct: 95 ITLHVFRPAGVEGVLPGLVYTHGGGMTILTT-DNRVHRRWCTDLAAAGSVVVMVDFRNAW 153
Query: 116 ---PEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDS 172
HP P+ ED L A+ WV H RE + V + G+S
Sbjct: 154 TAEGHHPFPSGVEDCLAAVLWVDEH--------------------RESLGLSGVVVQGES 193
Query: 173 AGSSIAHYLGLRIKDEVRDLKVLGIVMIMPYFWG 206
G ++A L K R + G+ +PY G
Sbjct: 194 GGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 57 VSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAP 116
V R+YR P+VVY H G F + + D + L L A +VSV+YRLAP
Sbjct: 73 VPVRIYRAA--PTPAPVVVYCHAGGFALGN-LDTDHRQCLE-LARRARCAVVSVDYRLAP 128
Query: 117 EHPLPAAFEDSLGALKWVASHAKGEG 142
EHP PAA D++ L WV +A G
Sbjct: 129 EHPYPAALHDAIEVLTWVVGNATRLG 154
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 35/157 (22%)
Query: 42 TNVLSKDVLILP---ETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNN 98
+++LS LP E + V+ P + LP++V+ HGGAF + + ++P Y S
Sbjct: 65 SDLLSLSYTELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGS--K 122
Query: 99 LVAEADIILVSVNYRLAP-----EHPLPAAFEDSLG------ALKWVASHAKGEGDGNGP 147
L A+ ++I+V++NYRL P A+ D+LG ALKWV + G
Sbjct: 123 LAAQGEVIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG---- 178
Query: 148 LPVLNQEAWLREFVDFDKVFLAGDSAGS-SIAHYLGL 183
D D V + G+SAG SIA L +
Sbjct: 179 --------------DPDNVTVFGESAGGMSIAALLAM 201
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 35/157 (22%)
Query: 42 TNVLSKDVLILP---ETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNN 98
+++LS LP E + V+ P + LP++V+ HGGAF + + ++P Y S
Sbjct: 65 SDLLSLSYTELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGS--K 122
Query: 99 LVAEADIILVSVNYRLAP-----EHPLPAAFEDSLG------ALKWVASHAKGEGDGNGP 147
L A+ ++I+V++NYRL P A+ D+LG ALKWV + G
Sbjct: 123 LAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG---- 178
Query: 148 LPVLNQEAWLREFVDFDKVFLAGDSAGS-SIAHYLGL 183
D D V + G+SAG SIA L +
Sbjct: 179 --------------DPDNVTVFGESAGGMSIAALLAM 201
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 35/157 (22%)
Query: 42 TNVLSKDVLILP---ETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNN 98
+++LS LP E + V+ P + LP++V+ HGGAF + + ++P Y S
Sbjct: 65 SDLLSLSYKELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGS--K 122
Query: 99 LVAEADIILVSVNYRLAP-----EHPLPAAFEDSLG------ALKWVASHAKGEGDGNGP 147
L A+ ++I+V++NYRL P A+ D+LG ALKWV + G
Sbjct: 123 LAAQGEVIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG---- 178
Query: 148 LPVLNQEAWLREFVDFDKVFLAGDSAGS-SIAHYLGL 183
D D V + G+SAG SIA L +
Sbjct: 179 --------------DPDNVTVFGESAGGMSIAALLAM 201
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 57 VSARVYRPGNITNKLPLVVYFHGGAFVI--ASSADPKYHTSLNNLVAEADIILVSVNYRL 114
V R P N +P++++ HGG F I A S+DP + E + +V YRL
Sbjct: 65 VKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPF----CVEVARELGFAVANVEYRL 120
Query: 115 APEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAG 174
APE P D AL ++ +HA+ G +D ++ + G SAG
Sbjct: 121 APETTFPGPVNDCYAALLYIHAHAEELG------------------IDPSRIAVGGQSAG 162
Query: 175 SSIAHYLGLRIKDE 188
+A L+ +DE
Sbjct: 163 GGLAAGTVLKARDE 176
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 57 VSARVYRPGNITNKLPLVVYFHGGAFVI--ASSADPKYHTSLNNLVAEADIILVSVNYRL 114
V R P N +P++++ HGG F I A S+DP + E + +V YRL
Sbjct: 65 VKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPF----CVEVARELGFAVANVEYRL 120
Query: 115 APEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAG 174
APE P D AL ++ +HA+ G +D ++ + G SAG
Sbjct: 121 APETTFPGPVNDCYAALLYIHAHAEELG------------------IDPSRIAVGGQSAG 162
Query: 175 SSIAHYLGLRIKDE 188
+A L+ +DE
Sbjct: 163 GGLAAGTVLKARDE 176
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 61 VYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPL 120
V PG K ++Y HGG +V+ S + + ++A +L+ +YRLAPEHP
Sbjct: 72 VRAPGCQAGKA--ILYLHGGGYVMGSINTHRSMVGEISRASQAAALLL--DYRLAPEHPF 127
Query: 121 PAAFEDSLGALKWV 134
PAA ED + A +W+
Sbjct: 128 PAAVEDGVAAYRWL 141
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 61 VYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPL 120
V PG K ++Y HGG +V+ S + + ++A +L+ +YRLAPEHP
Sbjct: 59 VRAPGCQAGKA--ILYLHGGGYVMGSINTHRSMVGEISRASQAAALLL--DYRLAPEHPF 114
Query: 121 PAAFEDSLGALKWV 134
PAA ED + A +W+
Sbjct: 115 PAAVEDGVAAYRWL 128
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 33/152 (21%)
Query: 45 LSKDVLILPETGVSARVYRPGNIT--NKLPLVVYFHGGAFVIASSAD-PKYHTSLNNLVA 101
++K + + E + V+RP KLP++V+ +GGAFV SSA P ++
Sbjct: 94 MAKGTVSMNEDCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINM 153
Query: 102 EADIILVSVNYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPV 150
++ VS+NYR P E A D L+WV+ + G
Sbjct: 154 GQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGG------- 206
Query: 151 LNQEAWLREFVDFDKVFLAGDSAGS-SIAHYL 181
D DKV + G+SAG+ S+AH L
Sbjct: 207 -----------DPDKVMIFGESAGAMSVAHQL 227
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 54 ETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYR 113
E G+ ++ P K P++ + HGGAF+ S + P Y + D+++V++NYR
Sbjct: 82 EDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTA--FAKHGDVVVVTINYR 139
Query: 114 LAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEA---WLREFV-----DFDK 165
+ + G L S + G L +L+Q A W++E + D D
Sbjct: 140 M-----------NVFGFLHLGDSFGEAYAQA-GNLGILDQVAALRWVKENIAAFGGDPDN 187
Query: 166 VFLAGDSAGSS 176
+ + G+SAG++
Sbjct: 188 ITIFGESAGAA 198
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 54 ETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYR 113
E G+ ++ P K P++ + HGGAF+ S + P Y + D+++V++NYR
Sbjct: 82 EDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTA--FAKHGDVVVVTINYR 139
Query: 114 LAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEA---WLREFV-----DFDK 165
+ + G L S + G L +L+Q A W++E + D D
Sbjct: 140 M-----------NVFGFLHLGDSFGEAYAQA-GNLGILDQVAALRWVKENIAAFGGDPDN 187
Query: 166 VFLAGDSAGSS 176
+ + G+SAG++
Sbjct: 188 ITIFGESAGAA 198
>pdb|1DX4|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Phenylmethylamino)-1,2,3,4-Tetrahydroacridine
pdb|1QO9|A Chain A, Native Acetylcholinesterase From Drosophila Melanogaster
pdb|1QON|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Iodobenzylamino)-1,2,3,4-Tetrahydroacridine
Length = 585
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 36/129 (27%)
Query: 64 PGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYR--------LA 115
P N TN LP++++ +GG F+ S+ Y+ + + A ++I+ S YR LA
Sbjct: 134 PQNTTNGLPILIWIYGGGFMTGSATLDIYNADI--MAAVGNVIVASFQYRVGAFGFLHLA 191
Query: 116 PEHPLPAAFE--------DSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVF 167
PE P A E D A++W+ +A G GN W+ F
Sbjct: 192 PEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFG-GN--------PEWMTLF------- 235
Query: 168 LAGDSAGSS 176
G+SAGSS
Sbjct: 236 --GESAGSS 242
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 42 TNVLSKDVLILPETGVSARVYRPGNIT--NKLPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L L E + +Y P ++T N+LP++V+ HGG ++ +++ + L L
Sbjct: 79 TNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST---YDGL-AL 134
Query: 100 VAEADIILVSVNYRL--------APEHPLPA-AFEDSLGALKWVASHAKGEGDGNGPLPV 150
A ++++V++ YRL EH D + AL+WV + G G + +
Sbjct: 135 AAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTI 194
Query: 151 LNQEA 155
+ A
Sbjct: 195 FGESA 199
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 42 TNVLSKDVLILPETGVSARVYRPGNIT--NKLPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L L E + +Y P ++T N+LP++V+ HGG ++ +++ + L L
Sbjct: 82 TNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST---YDGL-AL 137
Query: 100 VAEADIILVSVNYRL--------APEHPLPA-AFEDSLGALKWVASHAKGEGDGNGPLPV 150
A ++++V++ YRL EH D + AL+WV + G G + +
Sbjct: 138 AAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTI 197
Query: 151 LNQEA 155
+ A
Sbjct: 198 FGESA 202
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 42 TNVLSKDVLILPETGVSARVYRPGNIT--NKLPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L L E + +Y P ++T N+LP++V+ HGG ++ +++ + L L
Sbjct: 84 TNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST---YDGL-AL 139
Query: 100 VAEADIILVSVNYRL--------APEHPLPA-AFEDSLGALKWVASHAKGEGDGNGPLPV 150
A ++++V++ YRL EH D + AL+WV + G G + +
Sbjct: 140 AAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTI 199
Query: 151 LNQEA 155
+ A
Sbjct: 200 FGESA 204
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 42 TNVLSKDVLILPETGVSARVYRPGNIT--NKLPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L L E + +Y P ++T N+LP++V+ HGG ++ +++ + L L
Sbjct: 84 TNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST---YDGL-AL 139
Query: 100 VAEADIILVSVNYRL--------APEHPLPA-AFEDSLGALKWVASHAKGEGDGNGPLPV 150
A ++++V++ YRL EH D + AL+WV + G G + +
Sbjct: 140 AAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTI 199
Query: 151 LNQEA 155
+ A
Sbjct: 200 FGESA 204
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 48/122 (39%), Gaps = 30/122 (24%)
Query: 71 LPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRL---------APEHPLP 121
LP++V+ HGG F S D H + D+I+++ NYRL + P
Sbjct: 115 LPVLVFIHGGGFAFGS-GDSDLHGP--EYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGN 171
Query: 122 AAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYL 181
A D + LKWV +A G D V L G SAG++ H L
Sbjct: 172 AGLRDMVTLLKWVQRNAHFFGGRP------------------DDVTLMGQSAGAAATHIL 213
Query: 182 GL 183
L
Sbjct: 214 SL 215
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 47/172 (27%)
Query: 44 VLSKDVLILPETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSAD--PKYHTSLNNLVA 101
V++KD LP T + A+ N K ++VY HGG + + D P+Y ++ L
Sbjct: 8 VITKDAFALPYTIIKAK-----NQPTK-GVIVYIHGGGLMFGKANDLSPQY---IDILTE 58
Query: 102 EADIILVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFV 161
D+I +S YRL PE L ED + + S N P
Sbjct: 59 HYDLIQLS--YRLLPEVSLDCIIEDVYASFDAIQSQY-----SNCP-------------- 97
Query: 162 DFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKVLGIVMIMPYFWGKKPIGVE 213
+F G S+G+ YL L I RD + G++ F+G I E
Sbjct: 98 ----IFTFGRSSGA----YLSLLI---ARDRDIDGVID----FYGYSRINTE 134
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 47/181 (25%)
Query: 66 NITNKLPLVVYFHGGAFVIASSADPKYHTSLNN-------LVAEADIILVSVNYRLAPEH 118
++ LP++++ +GGAF++ S + LNN + ++I+V+ NYR+ P
Sbjct: 93 QVSRDLPVMIWIYGGAFLMGSGHGANF---LNNYLYDGEEIATRGNVIVVTFNYRVGP-- 147
Query: 119 PLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQE---AWLREFV-----DFDKVFLAG 170
LG L + G+ + G + +Q AW++ + D D + L G
Sbjct: 148 ---------LGFL------STGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDPDNITLFG 192
Query: 171 DSAG------SSIAHYLGLRIKDEVRDLKVL---GIVMIMPYFWGKK---PIGVEVTDQF 218
+SAG +++ Y I+ + V ++ P FW KK +G V D
Sbjct: 193 ESAGGASVSLQTLSPYNKGLIRRAISQSGVALSPWVIQKNPLFWAKKVAEKVGCPVGDAA 252
Query: 219 R 219
R
Sbjct: 253 R 253
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 29/122 (23%)
Query: 67 ITNKLPLVVYFHGGAFVIASSADPKYHTSL----NNLVAEADIILVSVNYRLAPEHPLPA 122
+++ LP++++ +GGAF++ +S + ++ + ++I+V+ NYR+ P
Sbjct: 94 VSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP------ 147
Query: 123 AFEDSLGALKWVASHAKGEGDGNGPLPVLNQE---AWLREFV-----DFDKVFLAGDSAG 174
LG L + G+ + G + +Q AW++ + D D++ L G+SAG
Sbjct: 148 -----LGFL------STGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAG 196
Query: 175 SS 176
+
Sbjct: 197 GA 198
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 42 TNVLSKDVLILPETGVSARVYRPGNITNK--LPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L E + +Y P ++T + LP++V+ HGG ++ ++ + L L
Sbjct: 80 TNRKENIPLKFSEDCLYLNIYTPADLTKRGRLPVMVWIHGGGLMVGGAST---YDGL-AL 135
Query: 100 VAEADIILVSVNYRL--------APEHPLPA-AFEDSLGALKWVASHAKGEGDGNGPLPV 150
A ++++V++ YRL EH D + AL+WV + G G + +
Sbjct: 136 SAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIANFGGDPGSVTI 195
Query: 151 LNQEA 155
+ A
Sbjct: 196 FGESA 200
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 47/181 (25%)
Query: 66 NITNKLPLVVYFHGGAFVIASSADPKYHTSLNN-------LVAEADIILVSVNYRLAPEH 118
++ LP++++ +GGAF++ S + LNN + ++I+V+ NYR+ P
Sbjct: 93 QVSRDLPVMIWIYGGAFLMGSGHGANF---LNNYLYDGEEIATRGNVIVVTFNYRVGP-- 147
Query: 119 PLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQE---AWLREFV-----DFDKVFLAG 170
LG L + G+ + G + +Q AW++ + D + + L G
Sbjct: 148 ---------LGFL------STGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDPNNITLFG 192
Query: 171 DSAG------SSIAHYLGLRIKDEVRDLKVL---GIVMIMPYFWGKK---PIGVEVTDQF 218
+SAG +++ Y I+ + V ++ P FW KK +G V D
Sbjct: 193 ESAGGASVSLQTLSPYNKGLIRRAISQSGVALSPWVIQKNPLFWAKKVAEKVGCPVGDAA 252
Query: 219 R 219
R
Sbjct: 253 R 253
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 67 ITNKLPLVVYFHGGAFVIASSADPKYHTSL----NNLVAEADIILVSVNYRLAPEHPLPA 122
+++ LP++++ +GGAF++ +S + ++ + ++I+V+ NYR+ P
Sbjct: 94 VSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP------ 147
Query: 123 AFEDSLGALKWVASHAKGEGDGNGPLPVLNQE---AWLREFV-----DFDKVFLAGDSAG 174
LG L + G+ + G + +Q AW++ + D D + L G+SAG
Sbjct: 148 -----LGFL------STGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFGESAG 196
Query: 175 SS 176
+
Sbjct: 197 GA 198
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 67 ITNKLPLVVYFHGGAFVIASSADPKYHTSL----NNLVAEADIILVSVNYRLAPEHPLPA 122
+++ LP++++ +GGAF++ +S + ++ + ++I+V+ NYR+ P
Sbjct: 94 VSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP------ 147
Query: 123 AFEDSLGALKWVASHAKGEGDGNGPLPVLNQE---AWLREFV-----DFDKVFLAGDSAG 174
LG L + G+ + G + +Q AW++ + D D + L G+SAG
Sbjct: 148 -----LGFL------STGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFGESAG 196
Query: 175 SS 176
+
Sbjct: 197 GA 198
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 60 RVYRPGNITNK---LPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAP 116
++ R G+I + P++VY HGG+++ + Y S+ L + ++I+++VNYR
Sbjct: 135 KICRKGDIRDSGGPKPVMVYIHGGSYMEGTGN--LYDGSV--LASYGNVIVITVNYR--- 187
Query: 117 EHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFD-----KVFLAGD 171
LG L ++++ + G L ++ W E + F ++ + G
Sbjct: 188 -----------LGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS 236
Query: 172 SAGSSIAHYLGL 183
AG S + L L
Sbjct: 237 GAGGSCVNLLTL 248
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 23/126 (18%)
Query: 68 TNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDS 127
+ K P++++ HGG+++ + + S+ L A ++I+V++NYR
Sbjct: 135 SGKKPVMLFLHGGSYMEGTGN--MFDGSV--LAAYGNVIVVTLNYR-------------- 176
Query: 128 LGALKWVASHAKGEGDGNGPLPVLNQEAWLREFV-----DFDKVFLAGDSAGSSIAHYLG 182
LG L ++++ + G L + WL E + D +++ + G AG+S + L
Sbjct: 177 LGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPERITIFGSGAGASCVNLLI 236
Query: 183 LRIKDE 188
L E
Sbjct: 237 LSHHSE 242
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 23/117 (19%)
Query: 72 PLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDSLGAL 131
P++VY HGG+++ + Y S+ L + ++I+++VNYR LG L
Sbjct: 132 PVMVYIHGGSYMEGTGN--LYDGSV--LASYGNVIVITVNYR--------------LGVL 173
Query: 132 KWVASHAKGEGDGNGPLPVLNQEAWLREFVDFD-----KVFLAGDSAGSSIAHYLGL 183
++++ + G L ++ W E + F ++ + G AG S + L L
Sbjct: 174 GFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTL 230
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 23/122 (18%)
Query: 72 PLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDSLGAL 131
P++VY HGG+++ + Y S+ L + ++I+++VNYR LG L
Sbjct: 145 PVMVYIHGGSYMEGTGN--LYDGSV--LASYGNVIVITVNYR--------------LGVL 186
Query: 132 KWVASHAKGEGDGNGPLPVLNQEAWLREFVDFD-----KVFLAGDSAGSSIAHYLGLRIK 186
++++ + G L ++ W E + F ++ + G AG S + L L
Sbjct: 187 GFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHY 246
Query: 187 DE 188
E
Sbjct: 247 SE 248
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
Query: 69 NKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIILVSVNYRLAPEHPLPAAFEDSL 128
+K P++VY HGG+++ + + L + ++I++++NYR L
Sbjct: 133 SKKPVMVYIHGGSYMEGTGN----MIDGSILASYGNVIVITINYR--------------L 174
Query: 129 GALKWVASHAKGEGDGNGPLPVLNQEAWLREFV-----DFDKVFLAGDSAGSSIAHYLGL 183
G L ++++ + G L + W+ E V D +V + G AG+S L L
Sbjct: 175 GILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTL 234
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 34/142 (23%)
Query: 50 LILP--ETGVSARVYRP--GNITNKLPLVVYFHGGAFVIA-SSADPKYHTSLNNLVAEAD 104
++LP E ++ V RP + LP++++ GG F + SS P +++
Sbjct: 89 VVLPNDEDCLTINVIRPPGTRASAGLPVMLWIFGGGFELGGSSLFPGDQMVAKSVLMGKP 148
Query: 105 IILVSVNYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQ 153
+I VS+NYR+A E A D A++WVA + G G
Sbjct: 149 VIHVSMNYRVASWGFLAGPDIQNEGSGNAGLHDQRLAMQWVADNIAGFGG---------- 198
Query: 154 EAWLREFVDFDKVFLAGDSAGS 175
D KV + G+SAGS
Sbjct: 199 --------DPSKVTIYGESAGS 212
>pdb|1LLF|A Chain A, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
pdb|1LLF|B Chain B, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
Length = 534
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 32/141 (22%)
Query: 49 VLILPETGVSARVYRPGNITN--KLPLVVYFHGGAFVIAS-SADPKYHTSLNNLVAEADI 105
VL E ++ V RP LP++++ GG F I S + P +++ I
Sbjct: 90 VLPQSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPI 149
Query: 106 ILVSVNYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQE 154
I V+VNYR+A E A +D ++WVA + G G
Sbjct: 150 IHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGG----------- 198
Query: 155 AWLREFVDFDKVFLAGDSAGS 175
D KV + G+SAGS
Sbjct: 199 -------DPSKVTIFGESAGS 212
>pdb|1CLE|A Chain A, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
pdb|1CLE|B Chain B, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
Length = 534
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 32/141 (22%)
Query: 49 VLILPETGVSARVYRPGNITN--KLPLVVYFHGGAFVIAS-SADPKYHTSLNNLVAEADI 105
VL E ++ V RP LP++++ GG F I S + P +++ I
Sbjct: 90 VLPQSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPI 149
Query: 106 ILVSVNYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQE 154
I V+VNYR+A E A +D ++WVA + G G
Sbjct: 150 IHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGG----------- 198
Query: 155 AWLREFVDFDKVFLAGDSAGS 175
D KV + G+SAGS
Sbjct: 199 -------DPSKVTIFGESAGS 212
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 24/118 (20%)
Query: 53 PETGVSARVYRPGNITNKLPLVVYFHGGAFVIASSADPKYHTSLNNLVAE-ADIILVSVN 111
P V+ R+Y P + + Y HGG F++ + H + L+A ++ ++
Sbjct: 71 PYGDVTTRLYSPQPTSQAT--LYYLHGGGFILGNL---DTHDRIXRLLARYTGCTVIGID 125
Query: 112 YRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLA 169
Y L+P+ P A E+++ + + HA ++ +K+ A
Sbjct: 126 YSLSPQARYPQAIEETVAVCSYFSQHADEYS------------------LNVEKIGFA 165
>pdb|1CRL|A Chain A, Insights Into Interfacial Activation From An 'open'
Structure Of Candida Rugosa Lipase
pdb|1TRH|A Chain A, Two Conformational States Of Candida Rugosa Lipase
pdb|3RAR|A Chain A, X-Ray Structure Of A Bound Phosphonate Transition State
Analog And Enantioselectivity Of Candida Rugosa Lipase
Toward Chiral Carboxylic Acids
Length = 534
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 70 KLPLVVYFHGGAF-VIASSADPKYHTSLNNLVAEADIILVSVNYRLAP-----------E 117
LP++++ GG F V +S P ++ II VSVNYR++ E
Sbjct: 113 NLPVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAE 172
Query: 118 HPLPAAFEDSLGALKWVASH 137
A +D ++WVA +
Sbjct: 173 GSANAGLKDQRLGMQWVADN 192
>pdb|1VKH|A Chain A, Crystal Structure Of A Putative Serine Hydrolase (Ydr428c)
From Saccharomyces Cerevisiae At 1.85 A Resolution
pdb|1VKH|B Chain B, Crystal Structure Of A Putative Serine Hydrolase (Ydr428c)
From Saccharomyces Cerevisiae At 1.85 A Resolution
Length = 273
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 69 NKLPLVVYFHGGAFVIASSADPKYHTSLNNLVA---EADIILVSVNYRLAPEHPLPAAFE 125
N V+Y HGGA+ + ++ N + + E+ + S+ YRL+PE P
Sbjct: 39 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSXDTESTVCQYSIEYRLSPEITNPRNLY 98
Query: 126 DSLGAL 131
D++ +
Sbjct: 99 DAVSNI 104
>pdb|1LPM|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
pdb|1LPN|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPO|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPP|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPS|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
Length = 549
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 30/118 (25%)
Query: 70 KLPLVVYFHGGAF-VIASSADPKYHTSLNNLVAEADIILVSVNYRLAP-----------E 117
LP++++ GG F V +S P ++ II VSVNYR++ E
Sbjct: 128 NLPVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAE 187
Query: 118 HPLPAAFEDSLGALKWVASHAKGEGDGNGPLPVLNQEAWLREFVDFDKVFLAGDSAGS 175
A +D ++WVA + G D KV + G+SAGS
Sbjct: 188 GSANAGLKDQRLGMQWVADNIAAFGG------------------DPTKVTIFGESAGS 227
>pdb|3PPC|A Chain A, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Tyrosine Variant
With Zinc
pdb|3PPC|B Chain B, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Tyrosine Variant
With Zinc
Length = 789
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 167 FLAGDSAGSSIAHYLGLRIKDEVRDLKVLGIVMIM 201
F D +G A LGL ++DEV DL+ GI +I
Sbjct: 600 FPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQ 634
>pdb|3PPH|A Chain A, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Threonine Variant
pdb|3PPH|B Chain B, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Threonine Variant
Length = 789
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 167 FLAGDSAGSSIAHYLGLRIKDEVRDLKVLGIVMIM 201
F D +G A LGL ++DEV DL+ GI +I
Sbjct: 600 FPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQ 634
>pdb|3PPF|A Chain A, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Alanine Variant
Without Zinc
pdb|3PPG|A Chain A, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Alanine Variant
With Zinc
Length = 789
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 167 FLAGDSAGSSIAHYLGLRIKDEVRDLKVLGIVMIM 201
F D +G A LGL ++DEV DL+ GI +I
Sbjct: 600 FPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQ 634
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,978,336
Number of Sequences: 62578
Number of extensions: 344590
Number of successful extensions: 960
Number of sequences better than 100.0: 57
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 885
Number of HSP's gapped (non-prelim): 59
length of query: 245
length of database: 14,973,337
effective HSP length: 96
effective length of query: 149
effective length of database: 8,965,849
effective search space: 1335911501
effective search space used: 1335911501
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)