BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036686
(508 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 229/480 (47%), Gaps = 30/480 (6%)
Query: 30 PKNL--PPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQ 87
PK L PP P GWPL+G+++ L + + + R + ++YG + +++G V++++
Sbjct: 12 PKGLKSPPEPWGWPLLGHVL--TLGKNPHLALSR-MSQRYGDVLQIRIGSTPVLVLSRLD 68
Query: 88 LIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVK 147
I +ALV++G +F RP D + + G+ S + GP+W + RR L T +
Sbjct: 69 TIRQALVRQGDDFKGRP-DLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIAS 127
Query: 148 QCSWIRTWAMESHMKRLNSEAFDNDL--------FVEVMSSCRLTICSILICLCFGAKI- 198
+ + +E H+ + ++A + L + + +++ +++ +CFG
Sbjct: 128 DPASSSSCYLEEHVSK-EAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFP 186
Query: 199 --SEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRN 256
S+E + +++ + V +S DF PIL L ++ K +R + L ++
Sbjct: 187 ESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQE 246
Query: 257 RKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTS 316
+K NS ++ GA + S G +G + +++IV L +++ AG DT
Sbjct: 247 HYQDFDK----NSVRDIT---GALFKHSKKGPRASG-NLIPQEKIVNLVNDIFGAGFDTV 298
Query: 317 ATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPG 376
T W++ +LV EIQ K+ KE+ +G++ + D ++PYL+A + ET R
Sbjct: 299 TTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFL 358
Query: 377 HFLLSHAAIKDTELGGYSIPAGVHVEFYTAW-LTEDPDMWSDPGEFRPERFLEXXXXXXX 435
F + H+ +DT L G+ IP V F W + DP++W DP EFRPERFL
Sbjct: 359 PFTIPHSTTRDTTLNGFYIPKKCCV-FVNQWQVNHDPELWEDPSEFRPERFL--TADGTA 415
Query: 436 XXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTV 495
KM+ FG G+R C L I L +A ++ ++ PG D T Y T+
Sbjct: 416 INKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTM 475
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 224/484 (46%), Gaps = 30/484 (6%)
Query: 25 TTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVT 84
T+ G KN PPGP GWPL+G+++ L + + + R + ++YG + +++G VV+++
Sbjct: 5 TSSKGLKN-PPGPWGWPLIGHML--TLGKNPHLALSR-MSQQYGDVLQIRIGSTPVVVLS 60
Query: 85 SSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPT 144
I +ALV++G +F RP L+ S G+ S + GP+W + RR L + +
Sbjct: 61 GLDTIRQALVRQGDDFKGRPDLYTFTLI-SNGQSMSFSPDSGPVWAARRRLAQNGLKSFS 119
Query: 145 RVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS---------CRLTICSILICLCFG 195
+ + +E H+ + +E + L E+M+ +++ +++ +CFG
Sbjct: 120 IASDPASSTSCYLEEHVSK-EAEVLISTL-QELMAGPGHFNPYRYVVVSVTNVICAICFG 177
Query: 196 AKIS---EERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVP 252
+ +E + + ++ S DF+PIL L + K+L ++ +
Sbjct: 178 RRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQK 237
Query: 253 LIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAG 312
+++ EKG + ++ +D QL +++I+ + ++ AG
Sbjct: 238 MVKEHYKTFEKGHIRDITDSLIEHCQEKQLDE------NANVQLSDEKIINIVLDLFGAG 291
Query: 313 TDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRR 372
DT T W++ +LV+N +Q K+ +E+ +G+ + D +PY++A + ET R
Sbjct: 292 FDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRH 351
Query: 373 HPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAW-LTEDPDMWSDPGEFRPERFLEXXX 431
F + H+ +DT L G+ IP G V F W + D +W +P EF PERFL
Sbjct: 352 SSFVPFTIPHSTTRDTSLKGFYIPKGRCV-FVNQWQINHDQKLWVNPSEFLPERFL---T 407
Query: 432 XXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETY 491
K++ FG G+R C ++ + L +A ++ ++ G D T Y
Sbjct: 408 PDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIY 467
Query: 492 AFTV 495
T+
Sbjct: 468 GLTM 471
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 205/443 (46%), Gaps = 45/443 (10%)
Query: 62 DLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCA-I 120
L +K GP++ +++G + VV++ S + I EA++++ +FA RP +LV +C I
Sbjct: 51 SLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQ--RCQDI 108
Query: 121 NSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS 180
+ +Y LW++ ++ + L+ TR W+ E +R+ +A V +
Sbjct: 109 SLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQE-FCERMRVQAGAP---VTIQKE 164
Query: 181 CRLTICSILICLCFGAKISEERIKH-IESILKDVMLI---TSPQLPDFLPIL----TPLF 232
L CSI+ L FG K E+ + H ++D+M S Q+ D +P L P
Sbjct: 165 FSLLTCSIICYLTFGNK--EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGL 222
Query: 233 RRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTG 292
R +++A E R +E +R K + GQ + M+ +G V+ G
Sbjct: 223 WR-LKQAIENRDHMVE---KQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEE-------G 271
Query: 293 REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG--- 349
QL E + ++ GT+T+A+T WA+ L+ + EIQ +L +E+ +G
Sbjct: 272 PGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCS 331
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLT 409
V +D ++P L+A + E LR P L H + + + GY IP G+ V
Sbjct: 332 RVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAH 391
Query: 410 EDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIA 469
D +W P EFRP+RFLE + FG G R+C SL L + +++A
Sbjct: 392 LDETVWEQPHEFRPDRFLE---------PGANPSALAFGCGARVCLGESLARLELFVVLA 442
Query: 470 RMVHAYKWLP-----VPGAPPDP 487
R++ A+ LP +P PDP
Sbjct: 443 RLLQAFTLLPPPVGALPSLQPDP 465
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 198/486 (40%), Gaps = 35/486 (7%)
Query: 31 KNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIH 90
K PPGP WPL+GN + Q H F L ++YG +F +++G +V++ + IH
Sbjct: 8 KGKPPGPFAWPLIGN-AAAVGQAAHLSFA--RLARRYGDVFQIRLGSCPIVVLNGERAIH 64
Query: 91 EALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWR-------SLRRNFVTELITP 143
+ALVQ+G FA RP + R+V G ++ Y W+ S+ RNF T
Sbjct: 65 QALVQQGSAFADRPSFASFRVV--SGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTR---Q 119
Query: 144 TRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISE--- 200
R +Q + + L + F++ + + +++ +CFG + S
Sbjct: 120 PRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDP 179
Query: 201 ---ERIKHIESILKDVMLITSPQLPDFLPILTPL---FRRQMREAKELRKRQMECLVPLI 254
E + H E + V + L D +P L R RE ++L + ++
Sbjct: 180 EFRELLSHNEEFGRTV---GAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKF 236
Query: 255 RNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTD 314
+ G P +M+ + G G +L + + +++ A D
Sbjct: 237 LRHCESLRPGAAPR---DMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQD 293
Query: 315 TSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHP 374
T +T +W + ++Q ++ E+ VG+D L D +PY+ A + E +R
Sbjct: 294 TLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSS 353
Query: 375 PGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAW-LTEDPDMWSDPGEFRPERFLEXXXXX 433
+ HA +T + GY IP V F W + DP W +P F P RFL+
Sbjct: 354 FVPVTIPHATTANTSVLGYHIPKDT-VVFVNQWSVNHDPLKWPNPENFDPARFLD---KD 409
Query: 434 XXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAF 493
+++ F G+R C L + + L I+ + H + P P +Y
Sbjct: 410 GLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGL 469
Query: 494 TVVMKN 499
T+ K+
Sbjct: 470 TIKPKS 475
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 215/480 (44%), Gaps = 30/480 (6%)
Query: 41 PLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEF 100
PLVG+L + + H L+KKYGPI++++MG +T VIV QL E L+++G +F
Sbjct: 17 PLVGSL-PFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDF 75
Query: 101 ASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQ------CSWIRT 154
+ RP + + + S + I A+ G W+ RR + Q C I T
Sbjct: 76 SGRPQMATLDIA-SNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEIST 134
Query: 155 WA--MESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKD 212
+ +H N ++ D V V + ++ LIC K + + I++ +
Sbjct: 135 LCDMLATH----NGQSIDISFPVFVAVTNVIS----LICFNTSYKNGDPELNVIQNYNEG 186
Query: 213 VM-LITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSES 271
++ ++ L D +P L + + + K K + + L ++ N K EK ++ +S +
Sbjct: 187 IIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYK---EKFRS-DSIT 242
Query: 272 EMVSPIGAAYVDSLFGLE--PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVL 329
M+ + A ++S G E L + I+T ++ AG +T+ + +W + L+
Sbjct: 243 NMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLH 302
Query: 330 NQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTE 389
N ++++KLY+EI VG D ++ L+A ++E LR P L+ H A D+
Sbjct: 303 NPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSS 362
Query: 390 LGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGA 449
+G +++ G V L + W P +F PERFL +PFGA
Sbjct: 363 IGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLN---PAGTQLISPSVSYLPFGA 419
Query: 450 GRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPT-ETYAFTVVMKNSLKAVILPR 508
G R C L + L++A ++ + L VP P+ E V + +S K I R
Sbjct: 420 GPRSCIGEILARQELFLIMAWLLQRFD-LEVPDDGQLPSLEGIPKVVFLIDSFKVKIKVR 478
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 204/460 (44%), Gaps = 40/460 (8%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P++GNL Q+ L+ F L +++GP+FT+ +G + +V++ + + EA
Sbjct: 11 LPPGPFPLPIIGNLFQLELKNIPKSFT--RLAQRFGPVFTLYVGSQRMVVMHGYKAVKEA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWI 152
L+ EF+ R D P N+ GP W+ +RR +T L KQ +
Sbjct: 69 LLDYKDEFSGRG-DLPAFHAHRDRGIIFNN---GPTWKDIRRFSLTTLRNYGMGKQGNES 124
Query: 153 RTWAMESH-----MKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIE 207
R E+H +++ + FD + + C + I IL F E+ ++ +
Sbjct: 125 RI-QREAHFLLEALRKTQGQPFDPTFLIGC-APCNV-IADILFRKHFDYN-DEKFLRLMY 180
Query: 208 SILKDVMLITSP------QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFV 261
++ L+++P P FL L R+ ++ E+++ + R
Sbjct: 181 LFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKE--------YVSERVKEH 232
Query: 262 EKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLC-SEVISAGTDTSATTA 320
+ +PN ++ + E E+L + +T+ +++ AGT+T++TT
Sbjct: 233 HQSLDPNCPRDLTDCLLVEMEK-----EKHSAERLYTMDGITVTVADLFFAGTETTSTTL 287
Query: 321 EWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLL 380
+ + L+ EI+EKL++EI +G + +D ++MPY+DAVV E R L
Sbjct: 288 RYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNL 347
Query: 381 SHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXX 440
H A +DT GY IP G V + D + DP +F+PE FL
Sbjct: 348 PHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-- 405
Query: 441 XXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPV 480
PF G+R+C L + + LL+ ++ + P+
Sbjct: 406 ---FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPL 442
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 203/469 (43%), Gaps = 46/469 (9%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P +GN +Q+ ++ + + + ++YGP+FT+ +G R VV++ + EA
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLM--KISERYGPVFTIHLGPRRVVVLCGHDAVKEA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWR-----SLRRNFVTELITPTRVK 147
LV + EF+ R + +F A ++ E R +LR V + R++
Sbjct: 69 LVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGFGVGKRGIEERIQ 128
Query: 148 QCSWIRTWAME-SHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHI 206
+ + A+ +H ++ F T+ +++ + FG + E K
Sbjct: 129 EEAGFLIDALRGTHGANIDPTFF-----------LSRTVSNVISSIVFGDRFDYED-KEF 176
Query: 207 ESILKDVMLITSPQLPD---------FLPILTPLFRRQMREAKELRKRQMECLVPLIRNR 257
S+L+ M++ S Q F ++ L Q + KEL + L I +
Sbjct: 177 LSLLR--MMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKEL-----QGLEDFIAKK 229
Query: 258 KAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSA 317
++ +PNS + + +++ + E + + +V + AGT+T +
Sbjct: 230 VEHNQRTLDPNSPRDFID----SFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVS 285
Query: 318 TTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGH 377
TT + L+ + E++ K+++EI +GK+ K ED KMPY +AV+ E R
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLP 345
Query: 378 FLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXX 437
L+H KDT+ + +P G V + DP +S+P +F P+ FL+
Sbjct: 346 MGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSD 405
Query: 438 XXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD 486
VPF G+R C L + + L ++ +++ P +P D
Sbjct: 406 A-----FVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRF-KSPQSPKD 448
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 200/458 (43%), Gaps = 46/458 (10%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRK---KYGPIFTMQMGQRTVVIVTSSQLI 89
LPPGP +P++GN++Q+ + I + L K YGP+FT+ +G + V++ + +
Sbjct: 11 LPPGPTPFPIIGNILQIDAKD-----ISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAV 65
Query: 90 HEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQC 149
EALV G EFA R + ++ V K + W+ +RR + L K+
Sbjct: 66 KEALVDLGEEFAGR---GSVPILEKVSKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKRS 122
Query: 150 SWIRTW----AMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKH 205
R + +++ N+ D F+ + C + ICS++ F K EE +K
Sbjct: 123 IEDRIQEEARCLVEELRKTNASPCD-PTFILGCAPCNV-ICSVIFHNRFDYK-DEEFLKL 179
Query: 206 IESILKDVMLITSP------QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKA 259
+ES+ ++V L+ +P P L + + ++ A ++ ME ++ +
Sbjct: 180 MESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIME----KVKEHQK 235
Query: 260 FVEKGQNPNSESEMVSPIGAAYVDS-LFGLEPTGREQLGEQEIVTLCSEVISAGTDTSAT 318
++ NP ++D L +E + + +V S++ AGT+T++T
Sbjct: 236 LLDV-NNPRD-----------FIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTST 283
Query: 319 TAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHF 378
T +++ L+ + E+ ++ +EI +G+ +D +MPY DAV+ E R
Sbjct: 284 TLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPT 343
Query: 379 LLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXX 438
L HA +D Y IP G + + D + +P F P FL+
Sbjct: 344 NLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY 403
Query: 439 XXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK 476
+PF AG+R+C L + + L + ++ +K
Sbjct: 404 -----FMPFSAGKRMCVGEGLARMELFLFLTSILQNFK 436
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 197/465 (42%), Gaps = 38/465 (8%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P +GN +Q+ ++ + + + ++YGP+FT+ +G R VV++ + EA
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLM--KISERYGPVFTIHLGPRRVVVLCGHDAVREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWR-----SLRRNFVTELITPTRVK 147
LV + EF+ R + VF ++ E R +LR V + R++
Sbjct: 69 LVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 148 QCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIE 207
+ + A+ D F+ T+ +++ + FG + + + K
Sbjct: 129 EEAGFLIDALRG----TGGANIDPTFFLS------RTVSNVISSIVFGDRF-DYKDKEFL 177
Query: 208 SILK---DVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG 264
S+L+ + TS L +F M+ +++ +CL L VE
Sbjct: 178 SLLRMMLGIFQFTSTSTGQ----LYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHN 233
Query: 265 Q---NPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAE 321
Q +PNS + + +++ + E + + +V ++ GT+T +TT
Sbjct: 234 QRTLDPNSPRDFID----SFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLR 289
Query: 322 WAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLS 381
+ L+ + E++ K+++EI +GK+ K ED KMPY++AV+ E R L+
Sbjct: 290 YGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA 349
Query: 382 HAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXX 441
KDT+ + +P G V + DP +S+P +F P+ FL
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA--- 406
Query: 442 XKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD 486
VPF G+R C L + + L ++ ++ L +P D
Sbjct: 407 --FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKD 448
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 211/484 (43%), Gaps = 64/484 (13%)
Query: 26 TGGGPKNLP--PGPRGWPLVGNLVQVI----LQRRHFIFIVRDLRKKYGPIFTMQMGQRT 79
T G +N+ PGP WPL+G+L+++ L+++H + KKYG IF M++G
Sbjct: 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLA--EYHKKYGQIFRMKLGSFD 73
Query: 80 VVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPL------WRSLR 133
V + S L+ EAL + R P + + N A YG + W+ +R
Sbjct: 74 SVHLGSPSLL-EALYRTESAHPQRLEIKP----WKAYRDHRNEA-YGLMILEGQEWQRVR 127
Query: 134 RNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDN----DLFVEVMSSCRLTICSIL 189
F +L+ P + + + ++R++ + DL+ E+ +IC +L
Sbjct: 128 SAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVL 187
Query: 190 ICLCFG---AKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQ 246
FG + EE + I +I M+ T ++ ++TP+ + K +
Sbjct: 188 YEKRFGLLQKETEEEALTFITAI--KTMMSTFGKM-----MVTPVELHKRLNTKVWQAHT 240
Query: 247 M------ECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQE 300
+ + + P I NR Q P GA ++ ++ ++ L ++E
Sbjct: 241 LAWDTIFKSVKPCIDNR--LQRYSQQP----------GADFLCDIY-----QQDHLSKKE 283
Query: 301 IVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMP 360
+ +E+ A +T+A + W +++L N + Q +L +E+ + + + + ED+ MP
Sbjct: 284 LYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMP 343
Query: 361 YLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE 420
YL A +KE++R P F + K T LG Y++P G + T L D + D +
Sbjct: 344 YLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHK 402
Query: 421 FRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPV 480
FRPER+L+ +PFG G+R+C L L ++L + ++ Y +
Sbjct: 403 FRPERWLQKEKKINPFAH------LPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVAT 456
Query: 481 PGAP 484
P
Sbjct: 457 DNEP 460
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 198/463 (42%), Gaps = 34/463 (7%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P +GN +Q+ ++ + + + ++YGP+FT+ +G R VV++ + EA
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLM--KISERYGPVFTIHLGPRRVVVLCGHDAVREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWR-----SLRRNFVTELITPTRVK 147
LV + EF+ R + VF ++ E R +LR V + R++
Sbjct: 69 LVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 148 QCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIE 207
+ + A+ D F+ T+ +++ + FG + + + K
Sbjct: 129 EEAGFLIDALRG----TGGANIDPTFFLS------RTVSNVISSIVFGDRF-DYKDKEFL 177
Query: 208 SILKDVMLITSPQLPDF-LPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ- 265
S+L+ M++ S Q L +F M+ +++ + L L VE Q
Sbjct: 178 SLLR--MMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQR 235
Query: 266 --NPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWA 323
+PNS + + +++ + E + + +V + AGT+T +TT +
Sbjct: 236 TLDPNSPRDFID----SFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYG 291
Query: 324 MHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHA 383
L+ + E++ K+++EI +GK+ K ED KMPY++AV+ E R L+
Sbjct: 292 FLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARR 351
Query: 384 AIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXK 443
KDT+ + +P G V + DP +S+P +F P+ FL
Sbjct: 352 VKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA----- 406
Query: 444 MVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD 486
VPF G+R C L + + L ++ ++ L +P D
Sbjct: 407 FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKD 448
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 201/462 (43%), Gaps = 43/462 (9%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P++GN++Q+ ++ F + K YGP+FT+ G +V+ + + EA
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDICKSFT--NFSKVYGPVFTVYFGMNPIVVFHGYEAVKEA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWI 152
L+ G EF+ R +SPI + G I+S G W+ +RR +T L K+
Sbjct: 69 LIDNGEEFSGRG-NSPISQRITKGLGIISSN--GKRWKEIRRFSLTTLRNFGMGKRSIED 125
Query: 153 RTWAMESH-----MKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIE 207
R E+H +++ + D F+ + C + ICS++ F K + + ++
Sbjct: 126 RVQE-EAHCLVEELRKTKASPCD-PTFILGCAPCNV-ICSVVFQKRFDYK-DQNFLTLMK 181
Query: 208 SILKDVMLITSP--QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ 265
++ ++ SP Q+ + P+L F + L + R EK +
Sbjct: 182 RFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKV----------LKNVALTRSYIREKVK 231
Query: 266 NPNSESEMVSPIGAAYVDS-LFGLEPTGREQLGE---QEIVTLCSEVISAGTDTSATTAE 321
+ ++ +P ++D L +E Q E + +V +++ AGT+T++TT
Sbjct: 232 EHQASLDVNNP--RDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLR 289
Query: 322 WAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRH---PPGHF 378
+ + L+ + E+ K+ +EI +G+ +D MPY DAVV E R P G
Sbjct: 290 YGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTG-- 347
Query: 379 LLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXX 438
+ HA DT+ Y IP G + + D + +P F P FL+
Sbjct: 348 -VPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY 406
Query: 439 XXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPV 480
+PF AG+RIC L + + L + ++ + V
Sbjct: 407 -----FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSV 443
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 200/465 (43%), Gaps = 38/465 (8%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P +GN +Q+ ++ + + + ++YGP+FT+ +G R VV++ + EA
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLM--KISERYGPVFTIHLGPRRVVVLCGHDAVREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWR-----SLRRNFVTELITPTRVK 147
LV + EF+ R + VF ++ E R +LR V + R++
Sbjct: 69 LVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 148 QCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIE 207
+ + A+ D F+ T+ +++ + FG + + + K
Sbjct: 129 EEAGFLIDALRG----TGGANIDPTFFLS------RTVSNVISSIVFGDRF-DYKDKEFL 177
Query: 208 SILKDVMLI------TSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFV 261
S+L+ ++ I ++ QL + + ++A +L ++ L I +
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQL----LQGLEDFIAKKVEHN 233
Query: 262 EKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAE 321
++ +PNS + + +++ + E + + +V ++ GT+T +TT
Sbjct: 234 QRTLDPNSPRDFID----SFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLR 289
Query: 322 WAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLS 381
+ L+ + E++ K+++EI +GK+ K ED KMPY++AV+ E R L+
Sbjct: 290 YGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA 349
Query: 382 HAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXX 441
KDT+ + +P G V + DP +S+P +F P+ FL
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA--- 406
Query: 442 XKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD 486
VPF G+R C L + + L ++ ++ L +P D
Sbjct: 407 --FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKD 448
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 200/465 (43%), Gaps = 38/465 (8%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P +GN +Q+ ++ + + + ++YGP+FT+ +G R VV++ + EA
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLM--KISERYGPVFTIHLGPRRVVVLCGHDAVREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWR-----SLRRNFVTELITPTRVK 147
LV + EF+ R + VF ++ E R +LR V + R++
Sbjct: 69 LVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 148 QCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIE 207
+ + A+ D F+ T+ +++ + FG + + + K
Sbjct: 129 EEAGFLIDALRG----TGGANIDPTFFLS------RTVSNVISSIVFGDRF-DYKDKEFL 177
Query: 208 SILKDVMLI------TSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFV 261
S+L+ ++ I ++ QL + + ++A +L ++ L I +
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQL----LQGLEDFIAKKVEHN 233
Query: 262 EKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAE 321
++ +PNS + + +++ + E + + +V ++ GT+T +TT
Sbjct: 234 QRTLDPNSPRDFID----SFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLR 289
Query: 322 WAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLS 381
+ L+ + E++ K+++EI +GK+ K ED KMPY++AV+ E R L+
Sbjct: 290 YGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA 349
Query: 382 HAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXX 441
KDT+ + +P G V + DP +S+P +F P+ FL
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA--- 406
Query: 442 XKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD 486
VPF G+R C L + + L ++ ++ L +P D
Sbjct: 407 --FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKD 448
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 199/465 (42%), Gaps = 38/465 (8%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P +GN +Q+ ++ + + + ++YGP+FT+ +G R VV++ + EA
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLM--KISERYGPVFTIHLGPRRVVVLCGHDAVREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWR-----SLRRNFVTELITPTRVK 147
LV + EF+ R + VF ++ E R +LR V + R++
Sbjct: 69 LVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 148 QCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIE 207
+ + A+ D F+ T+ +++ + FG + + + K
Sbjct: 129 EEAGFLIDALRG----TGGANIDPTFFLS------RTVSNVISSIVFGDRF-DYKDKEFL 177
Query: 208 SILKDVMLI------TSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFV 261
S+L+ ++ I ++ QL + + ++A +L ++ L I +
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQL----LQGLEDFIAKKVEHN 233
Query: 262 EKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAE 321
++ +PNS + + +++ + E + + +V + GT+T +TT
Sbjct: 234 QRTLDPNSPRDFID----SFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLR 289
Query: 322 WAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLS 381
+ L+ + E++ K+++EI +GK+ K ED KMPY++AV+ E R L+
Sbjct: 290 YGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA 349
Query: 382 HAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXX 441
KDT+ + +P G V + DP +S+P +F P+ FL
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA--- 406
Query: 442 XKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD 486
VPF G+R C L + + L ++ ++ L +P D
Sbjct: 407 --FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKD 448
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 202/486 (41%), Gaps = 63/486 (12%)
Query: 18 LWWRYSSTTGGGPKNLP-PGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMG 76
+ + Y + + G K L PGP P +GN++ + F + KKYG ++ G
Sbjct: 1 MAYLYGTHSHGLFKKLGIPGPTPLPFLGNILSY---HKGFCMFDMECHKKYGKVWGFYDG 57
Query: 77 QRTVVIVTSSQLIHEALVQRGPE-FASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRN 135
Q+ V+ +T +I LV+ F +R P P+ + K AI+ AE W+ LR +
Sbjct: 58 QQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM----KSAISIAE-DEEWKRLR-S 111
Query: 136 FVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFG 195
++ T ++K+ I + ++ L EA + V + ++ FG
Sbjct: 112 LLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREA-ETGKPVTLKDVFGAYSMDVITSTSFG 170
Query: 196 AKIS------EERIKHIESILK----DVMLITSPQLPDFLPIL------------TPLFR 233
I + +++ + +L+ D ++ P +PIL T R
Sbjct: 171 VNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR 230
Query: 234 RQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGR 293
+ ++ KE R + ++R F++ +DS E
Sbjct: 231 KSVKRMKESRLEDTQ------KHRVDFLQ-----------------LMIDSQNSKETESH 267
Query: 294 EQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKE 353
+ L + E+V I AG +T+++ + M+ L + ++Q+KL +EI A +
Sbjct: 268 KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY 327
Query: 354 EDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD 413
+ V +M YLD VV ETLR P L KD E+ G IP GV V + L DP
Sbjct: 328 DTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPK 386
Query: 414 MWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVH 473
W++P +F PERF + PFG+G R C ++++ L + R++
Sbjct: 387 YWTEPEKFLPERFSKKNKDNIDPYI-----YTPFGSGPRNCIGMRFALMNMKLALIRVLQ 441
Query: 474 AYKWLP 479
+ + P
Sbjct: 442 NFSFKP 447
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 200/482 (41%), Gaps = 63/482 (13%)
Query: 22 YSSTTGGGPKNLP-PGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTV 80
Y + + G K L PGP P +GN++ + F + KKYG ++ GQ+ V
Sbjct: 4 YGTHSHGLFKKLGIPGPTPLPFLGNILSY---HKGFCMFDMECHKKYGKVWGFYDGQQPV 60
Query: 81 VIVTSSQLIHEALVQRGPE-FASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTE 139
+ +T +I LV+ F +R P P+ + K AI+ AE W+ LR + ++
Sbjct: 61 LAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM----KSAISIAE-DEEWKRLR-SLLSP 114
Query: 140 LITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKIS 199
T ++K+ I + ++ L EA + V + ++ FG I
Sbjct: 115 TFTSGKLKEMVPIIAQYGDVLVRNLRREA-ETGKPVTLKDVFGAYSMDVITSTSFGVNID 173
Query: 200 ------EERIKHIESILK----DVMLITSPQLPDFLPIL------------TPLFRRQMR 237
+ +++ + +L+ D ++ P +PIL T R+ ++
Sbjct: 174 SLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVK 233
Query: 238 EAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLG 297
KE R + ++R F++ +DS E + L
Sbjct: 234 RMKESRLEDTQ------KHRVDFLQ-----------------LMIDSQNSKETESHKALS 270
Query: 298 EQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVE 357
+ E+V I AG +T+++ + M+ L + ++Q+KL +EI A + + V
Sbjct: 271 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 330
Query: 358 KMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSD 417
+M YLD VV ETLR P L KD E+ G IP GV V + L DP W++
Sbjct: 331 QMEYLDMVVNETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTE 389
Query: 418 PGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKW 477
P +F PERF + PFG+G R C ++++ L + R++ + +
Sbjct: 390 PEKFLPERFSKKNKDNIDPYI-----YTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 444
Query: 478 LP 479
P
Sbjct: 445 KP 446
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 194/468 (41%), Gaps = 62/468 (13%)
Query: 35 PGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALV 94
PGP P +GN++ + F + KKYG ++ GQ+ V+ +T +I LV
Sbjct: 17 PGPTPLPFLGNILSY---HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLV 73
Query: 95 QRGPE-FASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIR 153
+ F +R P P+ + K AI+ AE W+ LR + ++ T ++K+ I
Sbjct: 74 KECYSVFTNRRPFGPVGFM----KSAISIAE-DEEWKRLR-SLLSPTFTSGKLKEMVPII 127
Query: 154 TWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKIS------EERIKHIE 207
+ ++ L EA + V + ++ FG I + +++ +
Sbjct: 128 AQYGDVLVRNLRREA-ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTK 186
Query: 208 SILK----DVMLITSPQLPDFLPIL------------TPLFRRQMREAKELRKRQMECLV 251
+L+ D ++ P +PIL T R+ ++ KE R +
Sbjct: 187 KLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQ--- 243
Query: 252 PLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISA 311
++R F++ +DS E + L + E+V I A
Sbjct: 244 ---KHRVDFLQ-----------------LMIDSQNSKETESHKALSDLELVAQSIIFIFA 283
Query: 312 GTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLR 371
G +T+++ + M+ L + ++Q+KL +EI A + + V +M YLD VV ETLR
Sbjct: 284 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 343
Query: 372 RHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXX 431
P L KD E+ G IP GV V + L DP W++P +F PERF +
Sbjct: 344 LFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 402
Query: 432 XXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLP 479
PFG+G R C ++++ L + R++ + + P
Sbjct: 403 DNIDPYI-----YTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKP 445
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 188/459 (40%), Gaps = 34/459 (7%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P++GNL+Q + R+ + LR+KYG +FT+ +G R VV++ + I EA
Sbjct: 11 LPPGPSPLPVLGNLLQ--MDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTEL----ITPTRVKQ 148
LV + F+ R + + +F G I + G WR+LRR + + + V++
Sbjct: 69 LVDQAEAFSGRGKIAVVDPIFQ-GYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 149 CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEE-----RI 203
+ +++ DN L ++S ICSI+ FG + + R+
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSN--IICSIV----FGKRFDYKDPVFLRL 179
Query: 204 KHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK 263
+ ++ S Q+ + F R+ R ++ + I
Sbjct: 180 LDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIY----RNLQEINTFIGQSVEKHRA 235
Query: 264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWA 323
+P++ + + Y+ + + + Q ++ + +AGT+T++TT +
Sbjct: 236 TLDPSNPRDFID----VYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYG 291
Query: 324 MHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHA 383
++ + E++ KEI +G +D KMPY DAV+ E R F + H
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 384 AIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXK 443
KDT+ GY IP V + DP + P F P FL+
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLD-----ANGALKRNEG 406
Query: 444 MVPFGAGRRICPAWSLGILHINLLIARMVHAYKWL-PVP 481
+PF G+RIC + + L ++ + PVP
Sbjct: 407 FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP 445
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 203/471 (43%), Gaps = 49/471 (10%)
Query: 23 SSTTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVI 82
+ T G LPPGP P++GN++Q+ + + + +L K YGP+FT+ G +V+
Sbjct: 2 AKKTSSGRGKLPPGPTPLPVIGNILQIDI--KDVSKSLTNLSKIYGPVFTLYFGLERMVV 59
Query: 83 VTSSQLIHEALVQRGPEFASRP-------PDSPIRLVFSVGKCAINSAEYGPLWRSLRRN 135
+ +++ EAL+ G EF+ R + +VFS GK W+ +RR
Sbjct: 60 LHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFGIVFSNGK----------RWKEIRRF 109
Query: 136 FVTELITPTRVKQCSWIRTW----AMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILIC 191
+ L K+ R + +++ + D F+ + C + ICSI+
Sbjct: 110 SLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCD-PTFILGCAPCNV-ICSIIFQ 167
Query: 192 LCFGAKISEERIKHIESILKDVMLITSP--QLPDFLPILTPLFRRQMREAKELRKRQMEC 249
F K ++ + +E + +++ ++++P Q+ + P + F +
Sbjct: 168 KRFDYK-DQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFP----------GTHNKL 216
Query: 250 LVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDS-LFGLEPTGREQLGE---QEIVTLC 305
L L +EK + ++ +P ++D L +E + Q E + +V
Sbjct: 217 LKNLAFMESDILEKVKEHQESMDINNP--RDFIDCFLIKMEKEKQNQQSEFTIENLVITA 274
Query: 306 SEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAV 365
++++ AGT+T++TT +A+ L+ + E+ K+ +EI VG++ +D MPY DAV
Sbjct: 275 ADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAV 334
Query: 366 VKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPER 425
V E R L HA D + Y IP G + + D + +P F P
Sbjct: 335 VHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRH 394
Query: 426 FLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK 476
FL+ +PF AG+RIC L + + L + ++ +
Sbjct: 395 FLDEGGNFKKSNY-----FMPFSAGKRICVGEGLARMELFLFLTFILQNFN 440
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 205/473 (43%), Gaps = 53/473 (11%)
Query: 23 SSTTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVI 82
+ T G LPPGP P++GN++Q+ + + + +L K YGP+FT+ G + +V+
Sbjct: 2 AKKTSSGRGKLPPGPTPLPVIGNILQIGI--KDISKSLTNLSKVYGPVFTLYFGLKPIVV 59
Query: 83 VTSSQLIHEALVQRGPEFASRP-------PDSPIRLVFSVGKCAINSAEYGPLWRSLRRN 135
+ + + EAL+ G EF+ R + +VFS GK W+ +RR
Sbjct: 60 LHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGK----------KWKEIRRF 109
Query: 136 FVTELITPTRVKQCSWIRTW----AMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILIC 191
+ L K+ R + +++ + D F+ + C + ICSI+
Sbjct: 110 SLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCD-PTFILGCAPCNV-ICSIIFH 167
Query: 192 LCFGAKISEERIKHIESILKDVMLITSPQLP---DFLPILTPLFRRQMREAKELRKRQME 248
F K ++ + +E + +++ +++SP + +F PI+ +
Sbjct: 168 KRFDYK-DQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNK----------- 215
Query: 249 CLVPLIRNRKAFV-EKGQNPNSESEMVSPIGAAYVDS-LFGLEPTGREQLGEQEIVTL-- 304
L+ + K+++ EK + +M +P ++D L +E Q E I +L
Sbjct: 216 -LLKNVAFMKSYILEKVKEHQESMDMNNP--QDFIDCFLMKMEKEKHNQPSEFTIESLEN 272
Query: 305 -CSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLD 363
++ AGT+T++TT +A+ L+ + E+ K+ +EI +G++ +D MPY D
Sbjct: 273 TAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTD 332
Query: 364 AVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRP 423
AVV E R L HA D + Y IP G + + D + +P F P
Sbjct: 333 AVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDP 392
Query: 424 ERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK 476
FL+ +PF AG+RIC +L + + L + ++ +
Sbjct: 393 HHFLDEGGNFKKSKY-----FMPFSAGKRICVGEALAGMELFLFLTSILQNFN 440
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 187/459 (40%), Gaps = 34/459 (7%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P++GNL+Q + R+ + LR+KYG +FT+ +G R VV++ + I EA
Sbjct: 11 LPPGPSPLPVLGNLLQ--MDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTEL----ITPTRVKQ 148
LV + F+ R + + +F G I + G WR+LRR + + + V++
Sbjct: 69 LVDQAEAFSGRGKIAVVDPIFQ-GYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 149 CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEE-----RI 203
+ +++ DN L ++S ICSI+ FG + + R+
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSN--IICSIV----FGKRFDYKDPVFLRL 179
Query: 204 KHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK 263
+ ++ S Q+ + F R+ R ++ + I
Sbjct: 180 LDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIY----RNLQEINTFIGQSVEKHRA 235
Query: 264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWA 323
+P++ + + Y+ + + + Q ++ + AGT+T++TT +
Sbjct: 236 TLDPSNPRDFID----VYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 324 MHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHA 383
++ + E++ KEI +G +D KMPY DAV+ E R F + H
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 384 AIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXK 443
KDT+ GY IP V + DP + P F P FL+
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLD-----ANGALKRNEG 406
Query: 444 MVPFGAGRRICPAWSLGILHINLLIARMVHAYKWL-PVP 481
+PF G+RIC + + L ++ + PVP
Sbjct: 407 FMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASPVP 445
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 187/459 (40%), Gaps = 34/459 (7%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P++GNL+Q + R+ + LR+KYG +FT+ +G R VV++ + I EA
Sbjct: 11 LPPGPSPLPVLGNLLQ--MDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTEL----ITPTRVKQ 148
LV + F+ R + + +F G I + G WR+LRR + + + V++
Sbjct: 69 LVDQAEAFSGRGKIAVVDPIFQ-GYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 149 CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEE-----RI 203
+ +++ DN L ++S ICSI+ FG + + R+
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSN--IICSIV----FGKRFDYKDPVFLRL 179
Query: 204 KHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK 263
+ ++ S Q+ + F R+ R ++ + I
Sbjct: 180 LDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIY----RNLQEINTFIGQSVEKHRA 235
Query: 264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWA 323
+P++ + + Y+ + + + Q ++ + AGT+T++TT +
Sbjct: 236 TLDPSNPRDFID----VYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 324 MHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHA 383
++ + E++ KEI +G +D KMPY DAV+ E R F + H
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 384 AIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXK 443
KDT+ GY IP V + DP + P F P FL+
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLD-----ANGALKRNEG 406
Query: 444 MVPFGAGRRICPAWSLGILHINLLIARMVHAYKWL-PVP 481
+PF G+RIC + + L ++ + PVP
Sbjct: 407 FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP 445
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 187/459 (40%), Gaps = 34/459 (7%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P++GNL+Q + R+ + LR+KYG +FT+ +G R VV++ + I EA
Sbjct: 11 LPPGPSPLPVLGNLLQ--MDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTEL----ITPTRVKQ 148
LV + F+ R + + +F G I + G WR+LRR + + + V++
Sbjct: 69 LVDQAEAFSGRGKIAVVDPIFQ-GYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 149 CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEE-----RI 203
+ +++ DN L ++S ICSI+ FG + + R+
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSN--IICSIV----FGKRFDYKDPVFLRL 179
Query: 204 KHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK 263
+ ++ S Q+ + F R+ R ++ + I
Sbjct: 180 LDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIY----RNLQEINTFIGQSVEKHRA 235
Query: 264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWA 323
+P++ + + Y+ + + + Q ++ + AGT+T++TT +
Sbjct: 236 TLDPSNPRDFID----VYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 324 MHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHA 383
++ + E++ KEI +G +D KMPY DAV+ E R F + H
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 384 AIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXK 443
KDT+ GY IP V + DP + P F P FL+
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLD-----ANGALKRNEG 406
Query: 444 MVPFGAGRRICPAWSLGILHINLLIARMVHAYKWL-PVP 481
+PF G+RIC + + L ++ + PVP
Sbjct: 407 FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP 445
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 201/467 (43%), Gaps = 57/467 (12%)
Query: 31 KNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIH 90
K PPGP P++GN++Q+ + + + +L K YGP+FT+ G + +V++ + +
Sbjct: 8 KGRPPGPTPLPVIGNILQIGI--KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVK 65
Query: 91 EALVQRGPEFASRP-------PDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITP 143
EAL+ G EF+ R + +VFS GK W+ +RR + L
Sbjct: 66 EALIDLGEEFSGRGIFPLAERANRGFGIVFSNGK----------KWKEIRRFSLMTLRNF 115
Query: 144 TRVKQCSWIRTW----AMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKIS 199
K+ R + +++ + D F+ + C + ICSI+ F K
Sbjct: 116 GMGKRSIEDRVQEEARCLVEELRKTKASPCD-PTFILGCAPCNV-ICSIIFHKRFDYK-D 172
Query: 200 EERIKHIESILKDVMLITSP--QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRN- 256
++ + +E + +++ +++SP Q+ + P L F + L++N
Sbjct: 173 QQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNK--------------LLKNV 218
Query: 257 ---RKAFVEKGQNPNSESEMVSPIGAAYVDS-LFGLEPTGREQLGEQEIVTL---CSEVI 309
+ +EK + +M +P ++D L +E Q E I +L ++
Sbjct: 219 AFMKSYILEKVKEHQESMDMNNP--QDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLF 276
Query: 310 SAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKET 369
AGT+T++TT +A+ L+ + E+ K+ +EI +G++ +D MPY DAVV E
Sbjct: 277 GAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEV 336
Query: 370 LRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEX 429
R L HA D + Y IP G + + D + +P F P FL+
Sbjct: 337 QRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE 396
Query: 430 XXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK 476
+PF AG+RIC +L + + L + ++ +
Sbjct: 397 GGNFKKSKY-----FMPFSAGKRICVGEALAGMELFLFLTSILQNFN 438
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 187/459 (40%), Gaps = 34/459 (7%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
LPPGP P++GNL+Q + R+ + LR+KYG +FT+ +G R VV++ + I EA
Sbjct: 11 LPPGPSPLPVLGNLLQ--MDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREA 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTEL----ITPTRVKQ 148
LV + F+ R + + +F G I + G WR+LRR + + + V++
Sbjct: 69 LVDQAEAFSGRGKIAVVDPIFQ-GYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 149 CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEE-----RI 203
+ +++ DN L ++S ICSI+ FG + + R+
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSN--IICSIV----FGKRFDYKDPVFLRL 179
Query: 204 KHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK 263
+ ++ S Q+ + F R+ R ++ + I
Sbjct: 180 LDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIY----RNLQEINTFIGQSVEKHRA 235
Query: 264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWA 323
+P++ + + Y+ + + + Q ++ + AGT+T++TT +
Sbjct: 236 TLDPSNPRDFID----VYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 324 MHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHA 383
++ + E++ KEI +G +D KMPY DAV+ E R F + H
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 384 AIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXK 443
KDT+ GY IP V + DP + P F P FL+
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLD-----ANGALKRNEG 406
Query: 444 MVPFGAGRRICPAWSLGILHINLLIARMVHAYKWL-PVP 481
+PF G+RIC + + L ++ + PVP
Sbjct: 407 FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP 445
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 184/449 (40%), Gaps = 22/449 (4%)
Query: 58 FIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVG- 116
+ LR+++G +F++Q+ VV++ + EALV G + A RPP PI + G
Sbjct: 34 YCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPP-VPITQILGFGP 92
Query: 117 -KCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFV 175
+ A YGP WR RR V+ L K+ + W E + A +
Sbjct: 93 RSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKS--LEQWVTEEAACLCAAFANHSGRPF 150
Query: 176 EVMSSCRLTICSILICLCFGAKI--SEERIKHIESILKDVMLITSPQLPDFLPILTPLFR 233
+ +++ L G + + R + + ++ + S L + L + L
Sbjct: 151 RPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLH 210
Query: 234 RQMREAKELR--KRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPT 291
K LR K + L L+ + + Q P +E A++ + +
Sbjct: 211 IPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTE-------AFLAEMEKAKGN 263
Query: 292 GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLV 351
++ + + +++ SAG T++TT W + ++L+ ++Q ++ +EI +G+
Sbjct: 264 PESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRP 323
Query: 352 KEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTED 411
+ D MPY AV+ E R ++H +D E+ G+ IP G + + + +D
Sbjct: 324 EMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 412 PDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARM 471
+W P F PE FL+ +PF AGRR C L + + L +
Sbjct: 384 EAVWEKPFRFHPEHFLDAQGHFVKPEA-----FLPFSAGRRACLGEPLARMELFLFFTSL 438
Query: 472 VHAYKWLPVPGAPPDPTETYAFTVVMKNS 500
+ + + VP P P+ F ++ S
Sbjct: 439 LQHFSF-SVPTGQPRPSHHGVFAFLVSPS 466
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 186/458 (40%), Gaps = 40/458 (8%)
Query: 58 FIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVG- 116
+ LR+++G +F++Q+ VV++ + EALV G + A RPP PI + G
Sbjct: 34 YCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPP-VPITQILGFGP 92
Query: 117 -KCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFV 175
+ A YGP WR RR V+ L K+ + W E + A +
Sbjct: 93 RSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKS--LEQWVTEEAACLCAAFANHSGRPF 150
Query: 176 EVMSSCRLTICSILICLCFGAK-------------ISEERIKHIESILKDVMLITSPQLP 222
+ +++ L G + +++E +K L++V+ + +
Sbjct: 151 RPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVL--NAVPVD 208
Query: 223 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYV 282
+P L R +K + L L+ + + Q P +E A++
Sbjct: 209 RHIPALAGKVLR-------FQKAFLTQLDELLTEHRMTWDPAQPPRDLTE-------AFL 254
Query: 283 DSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIV 342
+ + ++ + + +++ SAG T++TT W + ++L+ ++Q ++ +EI
Sbjct: 255 AEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEID 314
Query: 343 AAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVE 402
+G+ + D MPY AV+ E R ++H +D E+ G+ IP G +
Sbjct: 315 DVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLI 374
Query: 403 FYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGIL 462
+ + +D +W P F PE FL+ +PF AGRR C L +
Sbjct: 375 TNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEA-----FLPFSAGRRACLGEPLARM 429
Query: 463 HINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNS 500
+ L ++ + + VP P P+ F ++ S
Sbjct: 430 ELFLFFTSLLQHFSF-SVPTGQPRPSHHGVFAFLVSPS 466
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 186/432 (43%), Gaps = 44/432 (10%)
Query: 60 VRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCA 119
+R + YG IF++ +G + V++ ++ E LV + FA RP P+ + +
Sbjct: 40 MRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPC-LPLFMKMTKMGGL 98
Query: 120 INSAEYGPLWRSLRRNFVTEL--------ITPTRVKQCSWIRTWAMESHMKRLNSEAFDN 171
+NS YG W RR V +++ + + A+E++ R FD
Sbjct: 99 LNS-RYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGR----PFD- 152
Query: 172 DLFVEVMSSCRLTICSILICLCFGAKISEER--IKH-IESILKDVMLITSPQ--LPDFLP 226
F +++++ I +++I FG + + E +H IE ++V L S L + P
Sbjct: 153 --FKQLITNAVSNITNLII---FGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFP 207
Query: 227 ILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLF 286
+ L + ++L + L R +EK + N + ++ AY+D +
Sbjct: 208 WIGIL---PFGKHQQLFRNAAVVYDFLSR----LIEKA-SVNRKPQLPQHFVDAYLDEMD 259
Query: 287 GLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG 346
+ ++ ++ E+I AGT+T+ WA+ + L IQ ++ KEI +G
Sbjct: 260 QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG 319
Query: 347 KDGLVKEEDVEKMPYLDAVVKETLRRH---PPGHFLLSHAAIKDTELGGYSIPAGVHVEF 403
+G +D KMPY +AV+ E LR P G F HA +D + GYSIP G V
Sbjct: 320 PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIF---HATSEDAVVRGYSIPKGTTVIT 376
Query: 404 YTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILH 463
+ D W DP F PERFL+ +VPF GRR C L +
Sbjct: 377 NLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEA-----LVPFSLGRRHCLGEHLARME 431
Query: 464 INLLIARMVHAY 475
+ L ++ +
Sbjct: 432 MFLFFTALLQRF 443
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 186/432 (43%), Gaps = 44/432 (10%)
Query: 60 VRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCA 119
+R + YG IF++ +G + V++ ++ E LV + FA RP P+ + +
Sbjct: 40 MRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPC-LPLFMKMTKMGGL 98
Query: 120 INSAEYGPLWRSLRRNFVTEL--------ITPTRVKQCSWIRTWAMESHMKRLNSEAFDN 171
+NS YG W RR V +++ + + A+E++ R FD
Sbjct: 99 LNS-RYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGR----PFD- 152
Query: 172 DLFVEVMSSCRLTICSILICLCFGAKISEER--IKH-IESILKDVMLITSPQ--LPDFLP 226
F +++++ I +++I FG + + E +H IE ++V L S L + P
Sbjct: 153 --FKQLITNAVSNITNLII---FGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFP 207
Query: 227 ILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLF 286
+ L + ++L + L R +EK + N + ++ AY+D +
Sbjct: 208 WIGIL---PFGKHQQLFRNAAVVYDFLSR----LIEKA-SVNRKPQLPQHFVDAYLDEMD 259
Query: 287 GLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG 346
+ ++ ++ E+I AGT+T+ WA+ + L IQ ++ KEI +G
Sbjct: 260 QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG 319
Query: 347 KDGLVKEEDVEKMPYLDAVVKETLRRH---PPGHFLLSHAAIKDTELGGYSIPAGVHVEF 403
+G +D KMPY +AV+ E LR P G F HA +D + GYSIP G V
Sbjct: 320 PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIF---HATSEDAVVRGYSIPKGTTVIT 376
Query: 404 YTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILH 463
+ D W DP F PERFL+ +VPF GRR C L +
Sbjct: 377 NLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEA-----LVPFSLGRRHCLGEHLARME 431
Query: 464 INLLIARMVHAY 475
+ L ++ +
Sbjct: 432 MFLFFTALLQRF 443
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 190/450 (42%), Gaps = 45/450 (10%)
Query: 39 GWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGP 98
G PL+G+ ++ F+ +RD +G + +++G +TV VT+ +L + P
Sbjct: 30 GVPLLGHGWRLARDPLAFMSQLRD----HGDVVRIKLGPKTVYAVTNPELT--GALALNP 83
Query: 99 EFASRPP--DSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWA 156
++ P +S L +GK + +A GPL R RR I P
Sbjct: 84 DYHIAGPLWES---LEGLLGKEGVATAN-GPLHRRQRRT-----IQPAFRLDAIPAYGPI 134
Query: 157 MESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLI 216
ME L S R+ + CL G + +ER + + L V
Sbjct: 135 MEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRG-QYMDERAERLCVALATVFRG 193
Query: 217 TSPQLPDFLPILTPLFRRQMREAKELRKR--QMECLVP-LIRNRKAFVEKGQNPNSESEM 273
++ +P L PL+R + + + LV +I R+A GQ P+
Sbjct: 194 MYRRM--VVP-LGPLYRLPLPANRRFNDALADLHLLVDEIIAERRA---SGQKPDD---- 243
Query: 274 VSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEI 333
+ +L + + +GEQEI +++ G++T A+T W + L + E
Sbjct: 244 -------LLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEH 296
Query: 334 QEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGY 393
+++ E+ A G V EDV K+ + V+ E +R P ++L+ A+ ++ELGGY
Sbjct: 297 ADRIRDEVEAVTGGRP-VAFEDVRKLRHTGNVIVEAMRLRP-AVWVLTRRAVAESELGGY 354
Query: 394 SIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRI 453
IPAG + + + DP + D EF P+R+L M PF AG+R
Sbjct: 355 RIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYA-----MKPFSAGKRK 409
Query: 454 CPAWSLGILHINLLIARMVHAYKWLPVPGA 483
CP+ + + L+ A + Y++ V G+
Sbjct: 410 CPSDHFSMAQLTLITAALATKYRFEQVAGS 439
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 181/450 (40%), Gaps = 32/450 (7%)
Query: 45 NLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRP 104
NL+Q + RR + R+KYG +FT+ +G R VV++ + I EALV + F+ R
Sbjct: 23 NLLQ--MDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRG 80
Query: 105 PDSPIRLVF-SVGKCAINSAEYGPLWRSLRRNFVTEL----ITPTRVKQCSWIRTWAMES 159
+ + F G N G W+ LRR VT + + V++ +
Sbjct: 81 KIAMVDPFFRGYGVIFAN----GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIE 136
Query: 160 HMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLITS- 218
+++ D + +++ ICSI+ F + +E +K + + LI+S
Sbjct: 137 ELRKSKGALMDPTFLFQSITAN--IICSIVFGKRFHYQ-DQEFLKMLNLFYQTFSLISSV 193
Query: 219 -PQLPDFLPILTPLFRRQMREA-KELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSP 276
QL + F R+ K L++ + ++R+ +P++ +++
Sbjct: 194 FGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETL-----DPSAPRDLID- 247
Query: 277 IGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEK 336
Y+ + + + Q + + AGT+T++TT + ++ + E+
Sbjct: 248 ---TYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAER 304
Query: 337 LYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 396
+Y+EI +G + D KMPY +AV+ E R + H + T GY IP
Sbjct: 305 VYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIP 364
Query: 397 AGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPA 456
V + DP + P F P+ FL+ +PF G+RIC
Sbjct: 365 KDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEA-----FIPFSLGKRICLG 419
Query: 457 WSLGILHINLLIARMVHAYKWLPVPGAPPD 486
+ + L ++ + + P AP D
Sbjct: 420 EGIARAELFLFFTTILQNFS-MASPVAPED 448
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 192/462 (41%), Gaps = 43/462 (9%)
Query: 33 LPPGPRGW-PLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHE 91
LPP G P VG+++Q F+ +KKYG IFTM + + +V +
Sbjct: 4 LPPVVHGTTPFVGHIIQFGKDPLGFML---KAKKKYGGIFTMNICGNRITVVGDVHQHSK 60
Query: 92 ALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSW 151
R + R S + VF G+ +A Y + L NF+ E +T + + +
Sbjct: 61 FFTPRNEILSPREVYSFMVPVF--GEGVAYAAPYPRMREQL--NFLAEELTVAKFQNFAP 116
Query: 152 IRTWAMESHMKRLNSEAFDNDLF-VEVMSSCRLTICSILICLCFGAKISEERI--KHIES 208
+++ +++ ++ D + ++ C I + C C + +R+ +
Sbjct: 117 ----SIQHEVRKFMKANWNKDEGEINILDDCSAMIINT-ACQCLFGEDLRKRLDARQFAQ 171
Query: 209 ILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPN 268
+L + P FLP + L Q ++ R + L +I R+ E ++ N
Sbjct: 172 LLAKMESCLIPAAV-FLPWILKLPLPQSYRCRDARAELQDILSEIIIAREK-EEAQKDTN 229
Query: 269 SESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLV 328
+ + +GA Y D ++ + E+ + + AG TS T W++ HL+
Sbjct: 230 TSDLLAGLLGAVYRDG---------TRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLM 280
Query: 329 --LNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIK 386
N+ KL++EI + L + +E+MP+ + +E++RR PP +L +K
Sbjct: 281 DPRNKRHLAKLHQEIDEFPAQ--LNYDNVMEEMPFAEQCARESIRRDPP-LVMLMRKVLK 337
Query: 387 DTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVP 446
++G Y +P G + +D + + +P E+ PER ++
Sbjct: 338 PVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLVDGA----------FCG 387
Query: 447 FGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPT 488
FGAG C G+L + ++A ++ Y + + G P+P
Sbjct: 388 FGAGVHKCIGEKFGLLQVKTVLATVLRDYDF-ELLGPLPEPN 428
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 202/465 (43%), Gaps = 73/465 (15%)
Query: 33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEA 92
+PPG G P +G + L F + ++++GPIF ++ + V+ ++ +
Sbjct: 13 IPPGDFGLPWLGETLN-FLNDGDF---GKKRQQQFGPIFKTRLFGKNVIFISGALANRFL 68
Query: 93 LVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWI 152
+ F + P S R++ +G A+ + + G + RS RR + + P
Sbjct: 69 FTKEQETFQATWPLS-TRIL--LGPNAL-ATQMGEIHRS-RRKILYQAFLP--------- 114
Query: 153 RTWAMESHMKRLNS------EAFDNDLFVEVMSSCRLTICSILICLCFGAKISE--ERIK 204
RT ++S++ +++ E + V R + L G K+S+ +
Sbjct: 115 RT--LDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFP 172
Query: 205 HIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG 264
E+ ++ + LP +P+ LF + R A+ L ++E ++ KA +
Sbjct: 173 WFETYIQGLF-----SLP--IPLPNTLFGKSQR-ARALLLAELEKII------KA---RQ 215
Query: 265 QNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAM 324
Q P SE + + + AA D+ +P +L +Q ++ L AG +T T+ +
Sbjct: 216 QQPPSEEDALGILLAARDDNN---QPLSLPELKDQILLLLF-----AGHET--LTSALSS 265
Query: 325 HHLVLNQ--EIQEKLYKEIVAAVGKDGLVKE---EDVEKMPYLDAVVKETLRRHPP--GH 377
L+L Q +I+E++ +E K L +E E ++KMPYLD V++E LR PP G
Sbjct: 266 FCLLLGQHSDIRERVRQE----QNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGG 321
Query: 378 FLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXX 437
F I+D + G+ P G V + + DPD++ DP +F PERF
Sbjct: 322 F---RELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF----TPDGSAT 374
Query: 438 XXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPG 482
VPFG G R C L + L R++ + W +PG
Sbjct: 375 HNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPG 419
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 199/477 (41%), Gaps = 70/477 (14%)
Query: 31 KNLPPGPRGWPLVGN----LVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSS 86
K LP G + P + + L I + I + + +KYGP+F+ M +T + S
Sbjct: 4 KTLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGS 63
Query: 87 QLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRV 146
AL+ F S+ D V+S + + +G + ++ P +
Sbjct: 64 DAA--ALL-----FNSKNEDLNAEDVYS----RLTTPVFG-------KGVAYDVPNPVFL 105
Query: 147 KQCSWIRTWAMESHMKRLNS--------------EAFDNDLFVEVMSSCRLTICSILICL 192
+Q +++ +H K+ S E+ + ++F E +S L I + CL
Sbjct: 106 EQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVF-EALSE--LIILTASHCL 162
Query: 193 CFGAKIS---EERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMEC 249
G +I E++ + + L + LP +LP+ P FRR+ R +E++ +
Sbjct: 163 -HGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPL--PSFRRRDRAHREIK----DI 215
Query: 250 LVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVI 309
I+ R+ EK + + + + A Y D GR L + E+ + ++
Sbjct: 216 FYKAIQKRRQSQEK-----IDDILQTLLDATYKD--------GRP-LTDDEVAGMLIGLL 261
Query: 310 SAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKD-GLVKEEDVEKMPYLDAVVKE 368
AG TS+TT+ W L ++ +Q+K Y E G++ + + ++ + LD +KE
Sbjct: 262 LAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKE 321
Query: 369 TLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLE 428
TLR PP ++ A T + GY+IP G V D W + +F P+R+L+
Sbjct: 322 TLRLRPPIMIMMRMARTPQT-VAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQ 380
Query: 429 XXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPP 485
VPFGAGR C + + I + + M+ Y++ + G P
Sbjct: 381 DNPASGEKFA-----YVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFP 432
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 193/476 (40%), Gaps = 56/476 (11%)
Query: 24 STTGGGPKNLPP-GPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVI 82
T+G G LPP P P +G++VQ + F+ R R +FT+ +G + V I
Sbjct: 1 KTSGKG--KLPPVYPVTVPFLGHIVQ--FGKNPLEFMQRCKRDLKSGVFTISIGGQRVTI 56
Query: 83 VTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELIT 142
V R + R + + VF G+ +A Y + L NF+ E +T
Sbjct: 57 VGDPHEHSRFFSPRNEILSPREVYTIMTPVF--GEGVAYAAPYPRMREQL--NFLAEELT 112
Query: 143 PTRVKQCSWIRTWAMESHMKRLNSEAFDNDL-FVEVMSSCRLTICSILICLCFGAKISEE 201
+ + A++ +++ +E + D + ++ C I + FG + +
Sbjct: 113 IAKFQNF----VPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKR 168
Query: 202 -RIKHIESILKDVMLITSPQLPD--FLPILTPLFRRQMREAKELRKRQMECLVPLIRNRK 258
+H +L + S +P F+P L L Q +E R + L +I R+
Sbjct: 169 LNARHFAQLLSK---MESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVARE 225
Query: 259 AFVEKGQNPNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSA 317
E+ N+ S+++ + A Y D ++ E+ + + AG TS
Sbjct: 226 K--EEASKDNNTSDLLGGLLKAVYRDGT---------RMSLHEVCGMIVAAMFAGQHTST 274
Query: 318 TTAEWAMHHLV--LNQEIQEKLYKEIV---AAVGKDGLVKEEDVEKMPYLDAVVKETLRR 372
T W+M HL+ N++ +KL+KEI A + D ++ E MP+ + V+E++RR
Sbjct: 275 ITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRR 329
Query: 373 HPPGHFLLSHAAIK-DTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXX 431
PP L+ +K + ++G Y +P G + D + + +P + PER
Sbjct: 330 DPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------ 381
Query: 432 XXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C +L + ++A Y + + PDP
Sbjct: 382 -----DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDP 432
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 189/469 (40%), Gaps = 53/469 (11%)
Query: 30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLI 89
P + P P P +G++VQ + F+ R R +FT+ +G + V IV
Sbjct: 15 PTDPPVYPVTVPFLGHIVQ--FGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEH 72
Query: 90 HEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQC 149
R + R + + VF G+ +A Y + L NF+ E +T + +
Sbjct: 73 SRFFSPRNEILSPREVYTIMTPVF--GEGVAYAAPYPRMREQL--NFLAEELTIAKFQNF 128
Query: 150 SWIRTWAMESHMKRLNSEAFDNDL-FVEVMSSCRLTICSILICLCFGAKISEE-RIKHIE 207
A++ +++ +E + D + ++ C I + FG + + +H
Sbjct: 129 ----VPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFA 184
Query: 208 SILKDVMLITSPQLPD--FLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ 265
+L + S +P F+P L L Q +E R + L +I R+ E+
Sbjct: 185 QLLSK---MESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREK--EEAS 239
Query: 266 NPNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAM 324
N+ S+++ + A Y D ++ E+ + + AG TS T W+M
Sbjct: 240 KDNNTSDLLGGLLKAVYRDGT---------RMSLHEVCGMIVAAMFAGQHTSTITTSWSM 290
Query: 325 HHLV--LNQEIQEKLYKEIV---AAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFL 379
HL+ N++ +KL+KEI A + D ++ E MP+ + V+E++RR PP L
Sbjct: 291 LHLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPP--LL 343
Query: 380 LSHAAIK-DTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXX 438
+ +K + ++G Y +P G + D + + +P + PER
Sbjct: 344 MVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-----------DE 392
Query: 439 XXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C +L + ++A Y + + PDP
Sbjct: 393 KVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDP 441
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 188/468 (40%), Gaps = 53/468 (11%)
Query: 31 KNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIH 90
K P P P +G++VQ + F+ R R +FT+ +G + V IV
Sbjct: 1 KTPPVYPVTVPFLGHIVQ--FGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHS 58
Query: 91 EALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCS 150
R + R + + VF G+ +A Y + L NF+ E +T + +
Sbjct: 59 RFFSPRNEILSPREVYTIMTPVF--GEGVAYAAPYPRMREQL--NFLAEELTIAKFQNF- 113
Query: 151 WIRTWAMESHMKRLNSEAFDNDL-FVEVMSSCRLTICSILICLCFGAKISEE-RIKHIES 208
A++ +++ +E + D + ++ C I + FG + + +H
Sbjct: 114 ---VPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQ 170
Query: 209 ILKDVMLITSPQLPD--FLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQN 266
+L + S +P F+P L L Q +E R + L +I R+ E+
Sbjct: 171 LLSK---MESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREK--EEASK 225
Query: 267 PNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMH 325
N+ S+++ + A Y D ++ E+ + + AG TS T W+M
Sbjct: 226 DNNTSDLLGGLLKAVYRDGT---------RMSLHEVCGMIVAAMFAGQHTSTITTSWSML 276
Query: 326 HLV--LNQEIQEKLYKEIV---AAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLL 380
HL+ N++ +KL+KEI A + D ++ E MP+ + V+E++RR PP L+
Sbjct: 277 HLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPP--LLM 329
Query: 381 SHAAIK-DTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXX 439
+K + ++G Y +P G + D + + +P + PER
Sbjct: 330 VMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-----------DEK 378
Query: 440 XXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C +L + ++A Y + + PDP
Sbjct: 379 VDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDP 426
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 180/467 (38%), Gaps = 62/467 (13%)
Query: 35 PGPRGW-PLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEAL 93
PG GW L + QR HF I + +KYGPI+ ++G V + + +
Sbjct: 16 PGDNGWLNLYHFWREKGSQRIHFRHI--ENFQKYGPIYREKLGNLESVYIIHPEDVAHLF 73
Query: 94 VQRG--PEFASRPP--------DSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITP 143
G PE PP PI ++F W+ R TE++ P
Sbjct: 74 KFEGSYPERYDIPPWLAYHRYYQKPIGVLFKKSGT----------WKKDRVVLNTEVMAP 123
Query: 144 TRVKQ-------CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFG- 195
+K S + +K+ S F D+ ++ +I +++ G
Sbjct: 124 EAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGM 183
Query: 196 --AKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPL 253
++ E K I+++ K M TS L + P L LFR K R
Sbjct: 184 LEETVNPEAQKFIDAVYK--MFHTSVPLLNVPPELYRLFR-----TKTWRDHVAAWDTIF 236
Query: 254 IRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGT 313
+ K Q+ ++E + G Y E++ +++ +E+++ G
Sbjct: 237 NKAEKYTEIFYQDLRRKTEFRNYPGILYC-------LLKSEKMLLEDVKANITEMLAGGV 289
Query: 314 DTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKM----PYLDAVVKET 369
+T++ T +W ++ + + +QE L +E++ A + E D+ KM P L A +KET
Sbjct: 290 NTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQ----AEGDISKMLQMVPLLKASIKET 345
Query: 370 LRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEX 429
LR HP L D L Y IPA V+ + DP +S P +F P R+L
Sbjct: 346 LRLHPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLS- 403
Query: 430 XXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK 476
+ + FG G R C + L + L + ++ +K
Sbjct: 404 -----KDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFK 445
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 180/460 (39%), Gaps = 47/460 (10%)
Query: 35 PGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALV 94
PG GW + + + + + V++ +KYGPI+ ++G V V + +
Sbjct: 11 PGDNGWLNLYHFWRETGTHKVHLHHVQNF-QKYGPIYREKLGNVESVYVIDPEDVALLFK 69
Query: 95 QRGP--EFASRPPDSPIRLVFS--VGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQ-- 148
GP E PP + +G SA W+ R E++ P K
Sbjct: 70 SEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAA----WKKDRVALNQEVMAPEATKNFL 125
Query: 149 -----CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAK------ 197
S + +K+ S + D+ ++ +I +++ FG +
Sbjct: 126 PLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVI----FGERQGMLEE 181
Query: 198 -ISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRN 256
++ E + I++I + M TS + + P L LFR + K + +
Sbjct: 182 VVNPEAQRFIDAIYQ--MFHTSVPMLNLPPDLFRLFRTKTW------KDHVAAWDVIFSK 233
Query: 257 RKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTS 316
+ QN E + Y L+ L G ++ ++I +E+++ G DT+
Sbjct: 234 ADIYT---QNFYWELRQKGSVHHDYRGILYRL--LGDSKMSFEDIKANVTEMLAGGVDTT 288
Query: 317 ATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPG 376
+ T +W ++ + N ++Q+ L E++AA + ++ +P L A +KETLR HP
Sbjct: 289 SMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPIS 348
Query: 377 HFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXX 436
L + D L Y IPA V+ L +P + DP F P R+L
Sbjct: 349 -VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLS------KD 401
Query: 437 XXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK 476
+ + FG G R C + L + + + M+ ++
Sbjct: 402 KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 441
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 177/442 (40%), Gaps = 72/442 (16%)
Query: 57 IFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVG 116
I +++ +R + G + T Q+ + VV+++ S EF F G
Sbjct: 27 IGLMQRVRDELGDVGTFQLAGKQVVLLSGSH---------ANEF-----------FFRAG 66
Query: 117 KCAINSAEYGPLWRSLRRNFVTELITPTRVKQC---SWIRTWAMESHMKRLNS------- 166
++ A+ P + V +P R K+ + +R M+ H +
Sbjct: 67 DDDLDQAKAYPFMTPIFGEAVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIA 126
Query: 167 ---EAFDNDL---FVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLITSP- 219
EA + DL F E LTI + CL G K ++ + ++ T P
Sbjct: 127 DWGEAGEIDLLDFFAE------LTIYTSSACLI-GKKFRDQLDGRFAKLYHELERGTDPL 179
Query: 220 -QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP---NSESEMVS 275
+ +LPI + FRR+ E R + + ++ R A NP S+ +M+
Sbjct: 180 AYVDPYLPIES--FRRR----DEARNGLVALVADIMNGRIA------NPPTDKSDRDMLD 227
Query: 276 PIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQE 335
+ A + TG + EI + ++ AG TS+ TA W + L+ +++
Sbjct: 228 VLIAVKAE-------TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 336 KLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSI 395
+ E+ G V + ++P L+ V+KETLR HPP +L A + E+ G+ I
Sbjct: 281 AVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRI 339
Query: 396 PAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICP 455
G V A P+ + DP +F P R+ + +PFGAGR C
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT----WIPFGAGRHRCV 395
Query: 456 AWSLGILHINLLIARMVHAYKW 477
+ I+ I + + ++ Y++
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEF 417
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 177/442 (40%), Gaps = 72/442 (16%)
Query: 57 IFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVG 116
I +++ +R + G + T Q+ + VV+++ S EF F G
Sbjct: 27 IGLMQRVRDELGDVGTFQLAGKQVVLLSGSH---------ANEF-----------FFRAG 66
Query: 117 KCAINSAEYGPLWRSLRRNFVTELITPTRVKQC---SWIRTWAMESHMKRLNS------- 166
++ A+ P + V +P R K+ + +R M+ H +
Sbjct: 67 DDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIA 126
Query: 167 ---EAFDNDL---FVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLITSP- 219
EA + DL F E LTI + CL G K ++ + ++ T P
Sbjct: 127 DWGEAGEIDLLDFFAE------LTIYTSSACLI-GKKFRDQLDGRFAKLYHELERGTDPL 179
Query: 220 -QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP---NSESEMVS 275
+ +LPI + FRR+ E R + + ++ R A NP S+ +M+
Sbjct: 180 AYVDPYLPIES--FRRR----DEARNGLVALVADIMNGRIA------NPPTDKSDRDMLD 227
Query: 276 PIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQE 335
+ A + TG + EI + ++ AG TS+ TA W + L+ +++
Sbjct: 228 VLIAVKAE-------TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 336 KLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSI 395
+ E+ G V + ++P L+ V+KETLR HPP +L A + E+ G+ I
Sbjct: 281 AVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRI 339
Query: 396 PAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICP 455
G V A P+ + DP +F P R+ + +PFGAGR C
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT----WIPFGAGRHRCV 395
Query: 456 AWSLGILHINLLIARMVHAYKW 477
+ I+ I + + ++ Y++
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEF 417
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 180/436 (41%), Gaps = 51/436 (11%)
Query: 62 DLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFS---VGKC 118
D KKYGP+ + + +T VIVTS + + + L+ S+ + ++ VF G+
Sbjct: 18 DWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRA-LQTVFGERLFGQG 76
Query: 119 AINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTW--AMESHMKRLNSEAFDNDLFVE 176
++ Y W RR V +L +R S + T+ E ++ L ++A D V
Sbjct: 77 LVSECNY-ERWHKQRR--VIDLAF-SRSSLVSLMETFNEKAEQLVEILEAKA-DGQTPVS 131
Query: 177 VMSSCRLTICSILICLCFGAKIS-----EERIKHIESILKDVMLITSPQLPDFLPILTPL 231
+ T IL FG + S ++ + ++ + + + L FLP
Sbjct: 132 MQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGK--- 188
Query: 232 FRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPT 291
R+Q+RE +E + + ++ R+ +++G+ + A + + E
Sbjct: 189 -RKQLREVRESIRFLRQVGRDWVQRRREALKRGEE----------VPADILTQILKAEE- 236
Query: 292 GREQLGEQEIVTLCSEVIS---AGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKD 348
G Q+ L ++ AG +TSA + + L EI +L E+ +G
Sbjct: 237 -----GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK 291
Query: 349 GLVKEEDVEKMPYLDAVVKETLRRHPP--GHFLLSHAAIKDTELGGYSIPAGVHVEFYTA 406
+ ED+ ++ YL V+KE+LR +PP G F L ++T + G +P + F T
Sbjct: 292 RYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLE---EETLIDGVRVPGNTPLLFSTY 348
Query: 407 WLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINL 466
+ + DP F P+RF PF G R C + + +
Sbjct: 349 VMGRMDTYFEDPLTFNPDRF-------GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKV 401
Query: 467 LIARMVHAYKWLPVPG 482
++A+++ ++ VPG
Sbjct: 402 VMAKLLQRLEFRLVPG 417
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 180/460 (39%), Gaps = 47/460 (10%)
Query: 35 PGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALV 94
PG GW + + + + + V++ +KYGPI+ ++G V V + +
Sbjct: 14 PGDNGWLNLYHFWRETGTHKVHLHHVQNF-QKYGPIYREKLGNVESVYVIDPEDVALLFK 72
Query: 95 QRGP--EFASRPPDSPIRLVFS--VGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQ-- 148
GP E PP + +G SA W+ R E++ P K
Sbjct: 73 SEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAA----WKKDRVALNQEVMAPEATKNFL 128
Query: 149 -----CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAK------ 197
S + +K+ S + D+ ++ +I +++ FG +
Sbjct: 129 PLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVI----FGERQGMLEE 184
Query: 198 -ISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRN 256
++ E + I++I + M TS + + P L LFR + K + +
Sbjct: 185 VVNPEAQRFIDAIYQ--MFHTSVPMLNLPPDLFRLFRTKTW------KDHVAAWDVIFSK 236
Query: 257 RKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTS 316
+ QN E + Y L+ L G ++ ++I +E+++ G DT+
Sbjct: 237 ADIYT---QNFYWELRQKGSVHHDYRGILYRL--LGDSKMSFEDIKANVTEMLAGGVDTT 291
Query: 317 ATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPG 376
+ T +W ++ + N ++Q+ L E++AA + ++ +P L A +KETLR HP
Sbjct: 292 SMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPIS 351
Query: 377 HFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXX 436
L + D L Y IPA V+ L +P + DP F P R+L
Sbjct: 352 -VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLS------KD 404
Query: 437 XXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK 476
+ + FG G R C + L + + + M+ ++
Sbjct: 405 KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 444
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 177/442 (40%), Gaps = 72/442 (16%)
Query: 57 IFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVG 116
I +++ +R + G + T Q+ + VV+++ S EF F G
Sbjct: 27 IGLMQRVRDECGDVGTFQLAGKQVVLLSGSH---------ANEF-----------FFRAG 66
Query: 117 KCAINSAEYGPLWRSLRRNFVTELITPTRVKQC---SWIRTWAMESHMKRLNS------- 166
++ A+ P + V +P R K+ + +R M+ H +
Sbjct: 67 DDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIA 126
Query: 167 ---EAFDNDL---FVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLITSP- 219
EA + DL F E LTI + CL G K ++ + ++ T P
Sbjct: 127 DWGEAGEIDLLDFFAE------LTIYTSSACLI-GKKFRDQLDGRFAKLYHELERGTDPL 179
Query: 220 -QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP---NSESEMVS 275
+ +LPI + FRR+ E R + + ++ R A NP S+ +M+
Sbjct: 180 AYVDPYLPIES--FRRR----DEARNGLVALVADIMNGRIA------NPPTDKSDRDMLD 227
Query: 276 PIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQE 335
+ A + TG + EI + ++ AG TS+ TA W + L+ +++
Sbjct: 228 VLIAVKAE-------TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 336 KLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSI 395
+ E+ G V + ++P L+ V+KETLR HPP +L A + E+ G+ I
Sbjct: 281 AVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRI 339
Query: 396 PAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICP 455
G V A P+ + DP +F P R+ + +PFGAGR C
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT----WIPFGAGRHRCV 395
Query: 456 AWSLGILHINLLIARMVHAYKW 477
+ I+ I + + ++ Y++
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEF 417
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 173/439 (39%), Gaps = 66/439 (15%)
Query: 57 IFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVG 116
I +++ +R + G + T Q+ + VV+++ S EF F G
Sbjct: 27 IGLMQRVRDELGDVGTFQLAGKQVVLLSGSH---------ANEF-----------FFRAG 66
Query: 117 KCAINSAEYGPLWRSLRRNFVTELITPTRVKQC---SWIRTWAMESHMKRLNS------- 166
++ A+ P + V +P R K+ + +R M+ H +
Sbjct: 67 DDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIA 126
Query: 167 ---EAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLITSP--QL 221
EA + DL T + LI G K ++ + ++ T P +
Sbjct: 127 DWGEAGEIDLLDFFAELTIYTSSATLI----GKKFRDQLDGRFAKLYHELERGTDPLAYV 182
Query: 222 PDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP---NSESEMVSPIG 278
+LPI + FRR+ E R + + ++ R A NP S+ +M+ +
Sbjct: 183 DPYLPIES--FRRR----DEARNGLVALVADIMNGRIA------NPPTDKSDRDMLDVLI 230
Query: 279 AAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLY 338
A + TG + EI + ++ AG TS+ TA W + L+ +++ +
Sbjct: 231 AVKAE-------TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVI 283
Query: 339 KEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG 398
E+ G V + ++P L+ V+KETLR HPP +L A + E+ G+ I G
Sbjct: 284 DELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRIHEG 342
Query: 399 VHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWS 458
V A P+ + DP +F P R+ + +PFGAGR C +
Sbjct: 343 DLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT----WIPFGAGRHRCVGAA 398
Query: 459 LGILHINLLIARMVHAYKW 477
I+ I + + ++ Y++
Sbjct: 399 FAIMQIKAIFSVLLREYEF 417
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 187/466 (40%), Gaps = 47/466 (10%)
Query: 30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLI 89
P + P P P++G+++Q + F+ R+ IFT+ + + V IV
Sbjct: 15 PTDPPVYPVTVPILGHIIQ--FGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEH 72
Query: 90 HEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQC 149
+ R + R S + VF G+ +A Y + L NF+ E +T + +
Sbjct: 73 SRFFLPRNEVLSPREVYSFMVPVF--GEGVAYAAPYPRMREQL--NFLAEELTIAKFQNF 128
Query: 150 SWIRTWAMESHMKRLNSEAFDNDLF-VEVMSSCRLTICSILICLCFG----AKISEERIK 204
A++ +++ + +D D + ++ C I + FG ++ R
Sbjct: 129 ----VPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFA 184
Query: 205 HIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG 264
+ + ++ ++ + FLPIL L Q E R + L +I RK E+
Sbjct: 185 QLLAKMESSLIPAAV----FLPILLKLPLPQSARCHEARTELQKILSEIIIARKE--EEV 238
Query: 265 QNPNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWA 323
+S S+++S + A Y D + E+ + + AG TS+ T W+
Sbjct: 239 NKDSSTSDLLSGLLSAVYRDGT---------PMSLHEVCGMIVAAMFAGQHTSSITTTWS 289
Query: 324 MHHLVLNQEIQ--EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLS 381
M HL+ ++ E L KEI + L +++MP+ + +E++RR PP +L
Sbjct: 290 MLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARESIRRDPP-LLMLM 346
Query: 382 HAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXX 441
+ D ++G Y +P G + D + + +P + PER
Sbjct: 347 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-----------DEKVE 395
Query: 442 XKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C G+L + ++A +Y + + PDP
Sbjct: 396 GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP 441
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 187/465 (40%), Gaps = 48/465 (10%)
Query: 32 NLPP-GPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIH 90
LPP P P++G+++Q + F+ R+ IFT+ + + V IV
Sbjct: 3 KLPPVYPVTVPILGHIIQ--FGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHS 60
Query: 91 EALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCS 150
+ R + R S + VF G+ +A Y + L NF+ E +T + +
Sbjct: 61 RFFLPRNEVLSPREVYSFMVPVF--GEGVAYAAPYPRMREQL--NFLAEELTIAKFQNF- 115
Query: 151 WIRTWAMESHMKRLNSEAFDNDLF-VEVMSSCRLTICSILICLCFG----AKISEERIKH 205
A++ +++ + +D D + ++ C I + FG ++ R
Sbjct: 116 ---VPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQ 172
Query: 206 IESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ 265
+ + ++ ++ + FLPIL L Q E R + L +I RK E+
Sbjct: 173 LLAKMESSLIPAAV----FLPILLKLPLPQSARCHEARTELQKILSEIIIARKE--EEVN 226
Query: 266 NPNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAM 324
+S S+++S + A Y D + E+ + + AG TS+ T W+M
Sbjct: 227 KDSSTSDLLSGLLSAVYRDGT---------PMSLHEVCGMIVAAMFAGQHTSSITTTWSM 277
Query: 325 HHLVLNQEIQ--EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSH 382
HL+ ++ E L KEI + L +++MP+ + +E++RR PP +L
Sbjct: 278 LHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARESIRRDPP-LLMLMR 334
Query: 383 AAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXX 442
+ D ++G Y +P G + D + + +P + PER
Sbjct: 335 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-----------DEKVEG 383
Query: 443 KMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C G+L + ++A +Y + + PDP
Sbjct: 384 AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP 428
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 187/465 (40%), Gaps = 48/465 (10%)
Query: 32 NLPP-GPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIH 90
LPP P P++G+++Q + F+ R+ IFT+ + + V IV
Sbjct: 4 KLPPVYPVTVPILGHIIQ--FGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHS 61
Query: 91 EALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCS 150
+ R + R S + VF G+ +A Y + L NF+ E +T + +
Sbjct: 62 RFFLPRNEVLSPREVYSFMVPVF--GEGVAYAAPYPRMREQL--NFLAEELTIAKFQNF- 116
Query: 151 WIRTWAMESHMKRLNSEAFDNDLF-VEVMSSCRLTICSILICLCFG----AKISEERIKH 205
A++ +++ + +D D + ++ C I + FG ++ R
Sbjct: 117 ---VPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQ 173
Query: 206 IESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ 265
+ + ++ ++ + FLPIL L Q E R + L +I RK E+
Sbjct: 174 LLAKMESSLIPAAV----FLPILLKLPLPQSARCHEARTELQKILSEIIIARKE--EEVN 227
Query: 266 NPNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAM 324
+S S+++S + A Y D + E+ + + AG TS+ T W+M
Sbjct: 228 KDSSTSDLLSGLLSAVYRDGT---------PMSLHEVCGMIVAAMFAGQHTSSITTTWSM 278
Query: 325 HHLVLNQEIQ--EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSH 382
HL+ ++ E L KEI + L +++MP+ + +E++RR PP +L
Sbjct: 279 LHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARESIRRDPP-LLMLMR 335
Query: 383 AAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXX 442
+ D ++G Y +P G + D + + +P + PER
Sbjct: 336 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-----------DEKVEG 384
Query: 443 KMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C G+L + ++A +Y + + PDP
Sbjct: 385 AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP 429
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 186/466 (39%), Gaps = 47/466 (10%)
Query: 30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLI 89
P + P P P++G+++Q + F+ R+ IFT+ + + V IV
Sbjct: 15 PTDPPVYPVTVPILGHIIQ--FGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEH 72
Query: 90 HEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQC 149
+ R + R S + VF G+ +A Y + L NF+ E +T + +
Sbjct: 73 SRFFLPRNEVLSPREVYSFMVPVF--GEGVAYAAPYPRMREQL--NFLAEELTIAKFQNF 128
Query: 150 SWIRTWAMESHMKRLNSEAFDNDLF-VEVMSSCRLTICSILICLCFG----AKISEERIK 204
A++ +++ + +D D + ++ C I + FG ++ R
Sbjct: 129 ----VPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFA 184
Query: 205 HIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG 264
+ + ++ ++ + FLPIL L Q E R + L +I RKA
Sbjct: 185 QLLAKMESSLIPAAV----FLPILLKLPLPQSARCHEARTELQKILSEIIIARKA--AAV 238
Query: 265 QNPNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWA 323
+S S+++S + A Y D + E+ + + AG TS+ T W+
Sbjct: 239 NKDSSTSDLLSGLLSAVYRDGT---------PMSLHEVCGMIVAAMFAGQHTSSITTTWS 289
Query: 324 MHHLVLNQEIQ--EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLS 381
M HL+ ++ E L KEI + L +++MP+ + +E++RR PP +L
Sbjct: 290 MLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARESIRRDPP-LLMLM 346
Query: 382 HAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXX 441
+ D ++G Y +P G + D + + +P + PER
Sbjct: 347 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-----------DEKVE 395
Query: 442 XKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C G+L + ++A +Y + + PDP
Sbjct: 396 GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP 441
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 187/465 (40%), Gaps = 48/465 (10%)
Query: 32 NLPP-GPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIH 90
LPP P P++G+++Q + F+ R+ IFT+ + + V IV
Sbjct: 2 KLPPVYPVTVPILGHIIQ--FGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHS 59
Query: 91 EALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCS 150
+ R + R S + VF G+ +A Y + L NF+ E +T + +
Sbjct: 60 RFFLPRNEVLSPREVYSFMVPVF--GEGVAYAAPYPRMREQL--NFLAEELTIAKFQNF- 114
Query: 151 WIRTWAMESHMKRLNSEAFDNDLF-VEVMSSCRLTICSILICLCFG----AKISEERIKH 205
A++ +++ + +D D + ++ C I + FG ++ R
Sbjct: 115 ---VPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQ 171
Query: 206 IESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ 265
+ + ++ ++ + FLPIL L Q E R + L +I RK E+
Sbjct: 172 LLAKMESSLIPAAV----FLPILLKLPLPQSARCHEARTELQKILSEIIIARKE--EEVN 225
Query: 266 NPNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAM 324
+S S+++S + A Y D + E+ + + AG TS+ T W+M
Sbjct: 226 KDSSTSDLLSGLLSAVYRDGT---------PMSLHEVCGMIVAAMFAGQHTSSITTTWSM 276
Query: 325 HHLVLNQEIQ--EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSH 382
HL+ ++ E L KEI + L +++MP+ + +E++RR PP +L
Sbjct: 277 LHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARESIRRDPP-LLMLMR 333
Query: 383 AAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXX 442
+ D ++G Y +P G + D + + +P + PER
Sbjct: 334 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-----------DEKVEG 382
Query: 443 KMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C G+L + ++A +Y + + PDP
Sbjct: 383 AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP 427
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 187/465 (40%), Gaps = 48/465 (10%)
Query: 32 NLPP-GPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIH 90
LPP P P++G+++Q + F+ R+ IFT+ + + V IV
Sbjct: 3 KLPPVYPVTVPILGHIIQ--FGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHS 60
Query: 91 EALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCS 150
+ R + R S + VF G+ +A Y + L NF+ E +T + +
Sbjct: 61 RFFLPRNEVLSPREVYSFMVPVF--GEGVAYAAPYPRMREQL--NFLAEELTIAKFQNF- 115
Query: 151 WIRTWAMESHMKRLNSEAFDNDLF-VEVMSSCRLTICSILICLCFG----AKISEERIKH 205
A++ +++ + +D D + ++ C I + FG ++ R
Sbjct: 116 ---VPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQ 172
Query: 206 IESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ 265
+ + ++ ++ + FLPIL L Q E R + L +I RK E+
Sbjct: 173 LLAKMESSLIPAAV----FLPILLKLPLPQSARCHEARTELQKILSEIIIARKE--EEVN 226
Query: 266 NPNSESEMVSPI-GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAM 324
+S S+++S + A Y D + E+ + + AG TS+ T W+M
Sbjct: 227 KDSSTSDLLSGLLSAVYRDGT---------PMSLHEVCGMIVAAMFAGQHTSSITTTWSM 277
Query: 325 HHLVLNQEIQ--EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSH 382
HL+ ++ E L KEI + L +++MP+ + +E++RR PP +L
Sbjct: 278 LHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARESIRRDPP-LLMLMR 334
Query: 383 AAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXX 442
+ D ++G Y +P G + D + + +P + PER
Sbjct: 335 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-----------DEKVEG 383
Query: 443 KMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP 487
+ FGAG C G+L + ++A +Y + + PDP
Sbjct: 384 AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP 428
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 293 REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVK 352
+ +L + I E+ + DT+A + L N ++Q+ L +E +AA
Sbjct: 270 KAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHP 329
Query: 353 EEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDP 412
++ ++P L A +KETLR +P G F L D L Y IPAG V+ + L +
Sbjct: 330 QKATTELPLLRAALKETLRLYPVGLF-LERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNA 388
Query: 413 DMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRIC 454
++ P + P+R+L+ VPFG G R C
Sbjct: 389 ALFPRPERYNPQRWLD------IRGSGRNFHHVPFGFGMRQC 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 129/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 191
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 192 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 233
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 234 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 294 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 351
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R CP
Sbjct: 352 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACPGQ 404
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 405 QFALHEATLVLGMMLKHFDF 424
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 129/321 (40%), Gaps = 38/321 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILICLCFGAKIS-------EERIKHIESILKDVMLITS 218
E ++D +EV RLT+ +I +C F +I+ I + L +VM
Sbjct: 132 ERLNSDEHIEVPEDMTRLTLDTIGLC-GFNYRINSFYRDQPHPFITSMVRALDEVMNKLQ 190
Query: 219 PQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIG 278
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 RANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------ 233
Query: 279 AAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLY 338
L G +P E L ++ I + AG +T++ +A++ LV N + +K
Sbjct: 234 -LLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAA 292
Query: 339 KEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPA 397
+E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y +
Sbjct: 293 EE-AARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAP-AFSLYAKEDTMLGGEYPLEK 350
Query: 398 GVHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPA 456
G + L D +W D EFRPERF PFG G+R C
Sbjct: 351 GDELMVLIPQLHRDKTVWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIG 403
Query: 457 WSLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QQFALHEATLVLGMMLKHFDF 424
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 134/320 (41%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D ++EV RLT+ +I +C F + ++ I S+ L +VM
Sbjct: 131 ERLNADEYIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIISMIRALDEVMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E Q+ + ++M++
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGE--QSDDLLTQMLN---- 239
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
G +P E L + I + AG +T++ +A++ LV N + +K+ +
Sbjct: 240 -------GKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-ATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
V L D +W D EFRPERF PFG G+R C
Sbjct: 351 DEVMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 129/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I ++AG + ++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P G S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 129/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 191
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 192 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 233
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I ++AG + ++ +A++ LV N + +K +
Sbjct: 234 LLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAE 293
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P G S A +DT LGG Y + G
Sbjct: 294 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGP-AFSLYAKEDTVLGGEYPLEKG 351
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 352 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 404
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 405 QFALHEATLVLGMMLKHFDF 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACEGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 127/320 (39%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 137 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 196
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 197 TNPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 238
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ + ++ LV N + +K +
Sbjct: 239 LLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAE 298
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 299 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 356
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 357 DEIMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 409
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 410 QFALHEATLVLGMMLKHFDF 429
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 134 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 193
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 194 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 235
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 236 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 296 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 353
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 354 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 406
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 407 QFALHEATLVLGMMLKHFDF 426
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 134 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 193
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 194 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 235
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 236 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 296 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSP-AFSLYAKEDTVLGGEYPLEKG 353
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 354 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 406
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 407 QFALHEATLVLGMMLKHFDF 426
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 197 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 243
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG +T++ +A++ LV N + +K +E A V D
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 302
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 361
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 362 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 414
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 415 LGMMLKHFDF 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG +T++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 191
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 192 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 233
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 234 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 294 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 351
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 352 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 404
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 405 QFALHEATLVLGMMLKHFDF 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 129/323 (39%), Gaps = 42/323 (13%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 191
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 192 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 233
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 234 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLR---RHPPGHFLLSHAAIKDTELGG-YSI 395
E A V D + + V+++ Y+ V+ E LR PP S A +DT LGG Y +
Sbjct: 294 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPP----FSLYAKEDTVLGGEYPL 348
Query: 396 PAGVHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRIC 454
G + L D +W D EFRPERF PFG G+R C
Sbjct: 349 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRAC 401
Query: 455 PAWSLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDF 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG +T++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGK 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 132/321 (41%), Gaps = 38/321 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEI-VTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLY 338
L G +P E L ++ I + +E+I AG +T++ +A++ LV N + +K
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITELI-AGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 339 KEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPA 397
+E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y +
Sbjct: 292 EE-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEK 349
Query: 398 GVHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPA 456
G + L D +W D EFRPERF PFG G+R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIG 402
Query: 457 WSLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 403 QQFALHEATLVLGMMLKHFDF 423
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 129/322 (40%), Gaps = 40/322 (12%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 134 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 193
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 194 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 235
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 236 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHP--PGHFLLSHAAIKDTELGG-YSIP 396
E A V D + + V+++ Y+ V+ E LR P P S A +DT LGG Y +
Sbjct: 296 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPA---FSLYAKEDTVLGGEYPLE 351
Query: 397 AGVHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICP 455
G + L D +W D EFRPERF PFG G+R C
Sbjct: 352 KGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACI 404
Query: 456 AWSLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 405 GQQFALHEATLVLGMMLKHFDF 426
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG ++++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 197 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 243
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG ++++ +A++ LV N + +K +E A V D
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 302
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 361
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 362 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 414
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 415 LGMMLKHFDF 424
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG ++++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG +T++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF P+G G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPYGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + G +T++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 127/320 (39%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + G +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 127/320 (39%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG + ++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG + ++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 127/320 (39%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + G +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 127/320 (39%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + G +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 197 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 243
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I ++AG + ++ +A++ LV N +K +E A V D
Sbjct: 244 PETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE-AARVLVDP 302
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 303 VPSHKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 361
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 362 HRDKTVWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 414
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 415 LGMMLKHFDF 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG + ++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 127/320 (39%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + G +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 127/320 (39%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + G +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF PFG G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG + ++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I ++AG + ++ +A++ LV N +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF PFG G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 128/320 (40%), Gaps = 36/320 (11%)
Query: 167 EAFDNDLFVEVMSS-CRLTICSILIC---LCFGAKISEERIKHIESI---LKDVMLITSP 219
E + D +EV RLT+ +I +C F + ++ I S+ L + M
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQR 190
Query: 220 QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA 279
PD P + R+ +E K + + +I +RKA E+ +
Sbjct: 191 ANPD-----DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD------------- 232
Query: 280 AYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
L G +P E L ++ I + AG +T++ +A++ LV N + +K +
Sbjct: 233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAG 398
E A V D + + V+++ Y+ V+ E LR P S A +DT LGG Y + G
Sbjct: 293 E-AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKG 350
Query: 399 VHVEFYTAWLTEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
+ L D +W D EFRPERF P+G G+R C
Sbjct: 351 DELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPWGNGQRACIGQ 403
Query: 458 SLGILHINLLIARMVHAYKW 477
+ L++ M+ + +
Sbjct: 404 QFALHEATLVLGMMLKHFDF 423
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG +T++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF P G G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPHGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Query: 230 PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE 289
P + R+ +E K + + +I +RKA E+ + L G +
Sbjct: 196 PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD-------------LLTHMLNGKD 242
Query: 290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG 349
P E L ++ I + AG +T++ +A++ LV N + +K +E A V D
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE-AARVLVDP 301
Query: 350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWL 408
+ + V+++ Y+ V+ E LR P S A +DT LGG Y + G + L
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 360
Query: 409 TEDPDMWSDP-GEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D +W D EFRPERF P G G+R C + L+
Sbjct: 361 HRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPAGNGQRACIGQQFALHEATLV 413
Query: 468 IARMVHAYKW 477
+ M+ + +
Sbjct: 414 LGMMLKHFDF 423
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 20/184 (10%)
Query: 322 WAMHHLVLNQEIQEKLYKEI----------VAAVGKDGLVKEEDVEKMPYLDAVVKETLR 371
W++ ++ N E + +E+ V+ G + + ++ +P LD+++KE+LR
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 372 RHPPGHFLLSHAAIKDTEL----GGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL 427
L A +D L G Y+I + Y + DP+++ DP F+ +R+L
Sbjct: 339 LSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 428 EXXXXXXXXXXXXXXKM----VPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGA 483
+ K+ +PFG+G ICP I I + M+ ++ + G
Sbjct: 397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ 456
Query: 484 PPDP 487
P
Sbjct: 457 AKCP 460
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 20/184 (10%)
Query: 322 WAMHHLVLNQEIQEKLYKEI----------VAAVGKDGLVKEEDVEKMPYLDAVVKETLR 371
W++ ++ N E + +E+ V+ G + + ++ +P LD+++KE+LR
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 372 RHPPGHFLLSHAAIKDTEL----GGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL 427
L A +D L G Y+I + Y + DP+++ DP F+ +R+L
Sbjct: 339 LSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 428 EXXXXXXXXXXXXXXKM----VPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGA 483
+ K+ +PFG+G ICP I I + M+ ++ + G
Sbjct: 397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ 456
Query: 484 PPDP 487
P
Sbjct: 457 AKCP 460
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 80/207 (38%), Gaps = 34/207 (16%)
Query: 278 GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKL 337
G + L +E +G +QL E EI+ C+ ++ AG +T+ +L+ N +
Sbjct: 224 GEDLMSGLVAVEESG-DQLTEDEIIATCNLLLIAGHETTV--------NLIANAALAMLR 274
Query: 338 YKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPA 397
AA+ DG AV++ET+R PP L+S A D +G +++P
Sbjct: 275 TPGQWAALAADG----------SRASAVIEETMRYDPPVQ-LVSRYAGDDLTIGTHTVPK 323
Query: 398 GVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
G + A DP + P F P+R + + FG G C
Sbjct: 324 GDTMLLLLAAAHRDPTIVGAPDRFDPDR--------------AQIRHLGFGKGAHFCLGA 369
Query: 458 SLGILHINLLIARMVHAYKWLPVPGAP 484
L L + + + + + G P
Sbjct: 370 PLARLEATVALPALAARFPEARLSGEP 396
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 356 VEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW 415
V++ Y + V+E R +P G +++ A+ +D E G + P G V D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 416 SDPGEFRPERF 426
+DP EFRPERF
Sbjct: 327 ADPQEFRPERF 337
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 331 QEIQEKLYKEIVAAVGK--DGLVKEEDVEKMPYLDAVVKETLRRHPP---------GHFL 379
+ + +L +EI A+ DG V E +E+MP +VV E+LR PP +F
Sbjct: 297 ENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFT 356
Query: 380 L-SHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL 427
+ SH A + + G + Y + T+DP ++ P E+ P+RF+
Sbjct: 357 IESHDAT-------FEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFV 398
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 356 VEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW 415
V++ Y + V+E R +P +++ A+ +D E G + P G V D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 416 SDPGEFRPERF 426
+DP EFRPERF
Sbjct: 319 ADPQEFRPERF 329
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 356 VEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW 415
V++ Y + V+E R +P +++ A+ +D E G + P G V D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 416 SDPGEFRPERF 426
+DP EFRPERF
Sbjct: 319 ADPQEFRPERF 329
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 356 VEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW 415
V++ Y + V+E R +P +++ A+ +D E G + P G V D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 416 SDPGEFRPERF 426
+DP EFRPERF
Sbjct: 319 ADPQEFRPERF 329
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 356 VEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW 415
V++ Y + V+E R +P +++ A+ +D E G + P G V D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 416 SDPGEFRPERF 426
+DP EFRPERF
Sbjct: 327 ADPQEFRPERF 337
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 356 VEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW 415
V++ Y + V+E R +P +++ A+ +D E G + P G V D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 416 SDPGEFRPERF 426
+DP EFRPERF
Sbjct: 327 ADPQEFRPERF 337
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 354 EDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD 413
ED ++P A+V+E LR PP + K TE+ G IPA V V + D D
Sbjct: 269 EDPGRIP---AIVEEVLRYRPP-FPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSD 324
Query: 414 MWSDPGEFRPER 425
DP F P R
Sbjct: 325 AHDDPDRFDPSR 336
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 354 EDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD 413
ED ++P A+V+E LR PP + K TE+ G IPA V V + D D
Sbjct: 289 EDPGRIP---AIVEEVLRYRPP-FPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSD 344
Query: 414 MWSDPGEFRPER 425
DP F P R
Sbjct: 345 AHDDPDRFDPSR 356
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 331 QEIQEKLYKEIVAAVGKDG-LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAA---IK 386
++ +L +EI + + +G + +EKM +VV E LR PP A +
Sbjct: 315 HQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVI 374
Query: 387 DTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL 427
++ + + AG + Y T DP ++ EF PERF+
Sbjct: 375 ESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 331 QEIQEKLYKEIVAAVGKDG-LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAA---IK 386
++ +L +EI + + +G + +EKM +VV E LR PP A +
Sbjct: 315 HQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVI 374
Query: 387 DTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL 427
++ + + AG + Y T DP ++ EF PERF+
Sbjct: 375 ESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 43/116 (37%), Gaps = 13/116 (11%)
Query: 366 VKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPER 425
V+E R +P G FL + KD G V DP +W P EFRPER
Sbjct: 280 VQEVRRYYPFGPFLGA-LVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPER 338
Query: 426 FLEXXXXXXXXXXXXXXKMVPFGAGR----RICPAWSLGILHINLLIARMVHAYKW 477
F E M+P G G CP + I + + +VH ++
Sbjct: 339 FAE--------REENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEY 386
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 79/212 (37%), Gaps = 39/212 (18%)
Query: 295 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEE 354
+L +E+V L +I+AGTDT+ +A+ +L+ + E E LVK E
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALE--------------LVKAE 283
Query: 355 DVEKMPYLDAVVK-ETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD 413
LD V++ E + R F A +D E G SI G V D
Sbjct: 284 PGLMRNALDEVLRFENILRIGTVRF-----ARQDLEYCGASIKKGEMVFLLIPSALRDGT 338
Query: 414 MWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVH 473
++S P F R + +G G +CP SL L + + +
Sbjct: 339 VFSRPDVFDVRR--------------DTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFR 384
Query: 474 AY-----KWLPVPGAPPDPTETYAFTVVMKNS 500
+ K PV G P + V++K S
Sbjct: 385 RFPEMKLKETPVFGYHPAFRNIESLNVILKPS 416
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 17/131 (12%)
Query: 362 LDAVVKETLR-RHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE 420
L +V+E +R P HF+ + A DTEL G I AG + DP + +P +
Sbjct: 322 LPGIVEEAIRWTTPVQHFMRT--AATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 421 FRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPV 480
F P R + + FGAG C L L + +L+ ++ L +
Sbjct: 380 FDPTR--------------PANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLEL 425
Query: 481 PGAPPDPTETY 491
G P T+
Sbjct: 426 AGEPKRVNSTF 436
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 282 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQ-EIQEKLYKE 340
V SL G GR+++ E V L + G + + + M HL+L++ E+ E+L E
Sbjct: 214 VTSLLGAA-VGRDEITLSEAVGLAVLLQIGGEAVTNNSGQ--MFHLLLSRPELAERLRSE 270
Query: 341 I-VAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG- 398
+ D L++ +P+ +AV LS A++D E+ G I AG
Sbjct: 271 PEIRPRAIDELLR-----WIPHRNAVG-------------LSRIALEDVEIKGVRIRAGD 312
Query: 399 -VHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
V+V + A DP+++ DP ER V FG G CP
Sbjct: 313 AVYVSYLAA--NRDPEVFPDPDRIDFER--------------SPNPHVSFGFGPHYCPGG 356
Query: 458 SLGILHINLLIARMVHAYKWLPVPGAPPD 486
L L LL+ ++ L + AP D
Sbjct: 357 MLARLESELLVDAVLDRVPGLKLAVAPED 385
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 282 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQ-EIQEKLYKE 340
V SL G GR+++ E V L + G + + + M HL+L++ E+ E+L E
Sbjct: 214 VTSLLGAA-VGRDEITLSEAVGLAVLLQIGGEAVTNNSGQ--MFHLLLSRPELAERLRSE 270
Query: 341 I-VAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG- 398
+ D L++ +P+ +AV LS A++D E+ G I AG
Sbjct: 271 PEIRPRAIDELLR-----WIPHRNAVG-------------LSRIALEDVEIKGVRIRAGD 312
Query: 399 -VHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
V+V + A DP+++ DP ER V FG G CP
Sbjct: 313 AVYVSYLAA--NRDPEVFPDPDRIDFER--------------SPNPHVSFGFGPHYCPGG 356
Query: 458 SLGILHINLLIARMVHAYKWLPVPGAPPD 486
L L LL+ ++ L + AP D
Sbjct: 357 MLARLESELLVDAVLDRVPGLKLAVAPED 385
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 282 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQ-EIQEKLYKE 340
V SL G GR+++ E V L + G + + + M HL+L++ E+ E+L E
Sbjct: 214 VTSLLGAA-VGRDEITLSEAVGLAVLLQIGGEAVTNNSGQ--MFHLLLSRPELAERLRSE 270
Query: 341 I-VAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG- 398
+ D L++ +P+ +AV LS A++D E+ G I AG
Sbjct: 271 PEIRPRAIDELLR-----WIPHRNAVG-------------LSRIALEDVEIKGVRIRAGD 312
Query: 399 -VHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
V+V + A DP+++ DP ER V FG G CP
Sbjct: 313 AVYVSYLAA--NRDPEVFPDPDRIDFER--------------SPNPHVSFGFGPHYCPGG 356
Query: 458 SLGILHINLLIARMVHAYKWLPVPGAPPD 486
L L LL+ ++ L + AP D
Sbjct: 357 MLARLESELLVDAVLDRVPGLKLAVAPED 385
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 282 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQ-EIQEKLYKE 340
V SL G GR+++ E V L + G + + + M HL+L++ E+ E+L E
Sbjct: 214 VTSLLGAA-VGRDEITLSEAVGLAVLLQIGGEAVTNNSGQ--MFHLLLSRPELAERLRSE 270
Query: 341 I-VAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG- 398
+ D L++ +P+ +AV LS A++D E+ G I AG
Sbjct: 271 PEIRPRAIDELLR-----WIPHRNAVG-------------LSRIALEDVEIKGVRIRAGD 312
Query: 399 -VHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
V+V + A DP+++ DP ER V FG G CP
Sbjct: 313 AVYVSYLAA--NRDPEVFPDPDRIDFER--------------SPNPHVSFGFGPHYCPGG 356
Query: 458 SLGILHINLLIARMVHAYKWLPVPGAPPD 486
L L LL+ ++ L + AP D
Sbjct: 357 MLARLESELLVDAVLDRVPGLKLAVAPED 385
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 282 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQ-EIQEKLYKE 340
V SL G GR+++ E V L + G + + + M HL+L++ E+ E+L E
Sbjct: 214 VTSLLGAA-VGRDEITLSEAVGLAVLLQIGGEAVTNNSGQ--MFHLLLSRPELAERLRSE 270
Query: 341 I-VAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG- 398
+ D L++ +P+ +AV LS A++D E+ G I AG
Sbjct: 271 PEIRPRAIDELLR-----WIPHRNAVG-------------LSRIALEDVEIKGVRIRAGD 312
Query: 399 -VHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
V+V + A DP+++ DP ER V FG G CP
Sbjct: 313 AVYVSYLAA--NRDPEVFPDPDRIDFER--------------SPNPHVSFGFGPHYCPGG 356
Query: 458 SLGILHINLLIARMVHAYKWLPVPGAPPD 486
L L LL+ ++ L + AP D
Sbjct: 357 MLARLESELLVDAVLDRVPGLKLAVAPED 385
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 282 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQ-EIQEKLYKE 340
V SL G GR+++ E V L + G + + + M HL+L++ E+ E+L E
Sbjct: 214 VTSLLGAA-VGRDEITLSEAVGLAVLLQIGGEAVTNNSGQ--MFHLLLSRPELAERLRSE 270
Query: 341 I-VAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG- 398
+ D L++ +P+ +AV LS A++D E+ G I AG
Sbjct: 271 PEIRPRAIDELLR-----WIPHRNAVG-------------LSRIALEDVEIKGVRIRAGD 312
Query: 399 -VHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
V+V + A DP+++ DP ER V FG G CP
Sbjct: 313 AVYVSYLAA--NRDPEVFPDPDRIDFER--------------SPNPHVSFGFGPHYCPGG 356
Query: 458 SLGILHINLLIARMVHAYKWLPVPGAPPD 486
L L LL+ ++ L + AP D
Sbjct: 357 MLARLESELLVDAVLDRVPGLKLAVAPED 385
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 282 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQ-EIQEKLYKE 340
V SL G GR+++ E V L + G + + + M HL+L++ E+ E+L E
Sbjct: 214 VTSLLGAA-VGRDEITLSEAVGLAVLLQIGGEAVTNNSGQ--MFHLLLSRPELAERLRSE 270
Query: 341 I-VAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG- 398
+ D L++ +P+ +AV LS A++D E+ G I AG
Sbjct: 271 PEIRPRAIDELLR-----WIPHRNAVG-------------LSRIALEDVEIKGVRIRAGD 312
Query: 399 -VHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAW 457
V+V + A DP+++ DP ER V FG G CP
Sbjct: 313 AVYVSYLAA--NRDPEVFPDPDRIDFER--------------SPNPHVSFGFGPHYCPGG 356
Query: 458 SLGILHINLLIARMVHAYKWLPVPGAPPD 486
L L LL+ ++ L + AP D
Sbjct: 357 MLARLESELLVDAVLDRVPGLKLAVAPED 385
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 79/212 (37%), Gaps = 39/212 (18%)
Query: 295 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEE 354
+L +E+V L +I+AGTDT+ +A+ +L+ + E E LVK E
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALE--------------LVKAE 283
Query: 355 DVEKMPYLDAVVK-ETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD 413
LD V++ + + R F A +D E G SI G V D
Sbjct: 284 PGLMRNALDEVLRFDNILRIGTVRF-----ARQDLEYCGASIKKGEMVFLLIPSALRDGT 338
Query: 414 MWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVH 473
++S P F R + +G G +CP SL L + + +
Sbjct: 339 VFSRPDVFDVRR--------------DTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFR 384
Query: 474 AY-----KWLPVPGAPPDPTETYAFTVVMKNS 500
+ K PV G P + V++K S
Sbjct: 385 RFPEMKLKETPVFGYHPAFRNIESLNVILKPS 416
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 364 AVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRP 423
A++ E +R PP L +D E+GG I AG + F DP+++ DP F
Sbjct: 268 AIINEMVRMDPPQLSFLRFP-TEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 424 ER 425
R
Sbjct: 327 TR 328
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 364 AVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRP 423
A++ E +R PP L +D E+GG I AG + F DP+++ DP F
Sbjct: 266 AIINEMVRMDPPQLSFLRFP-TEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 424 ER 425
R
Sbjct: 325 TR 326
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 367 KETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEF--YTAWLTEDPDMWSDPGE-FRP 423
+E LR +PP ++L+ + LG +P G + Y PD GE FRP
Sbjct: 259 QEALRLYPPA-WILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPD-----GEAFRP 312
Query: 424 ERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVP 481
ERFLE + PFG G+R+C +L +++ ++ P+P
Sbjct: 313 ERFLEERGTPSG-------RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLP 363
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 52/148 (35%), Gaps = 23/148 (15%)
Query: 283 DSLFGL---EPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK 339
D LF EP G E +C ++ G DT A HL + E Q L
Sbjct: 203 DDLFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLR- 261
Query: 340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGV 399
E+ + A E +RR+P +S A+ D + G +I G
Sbjct: 262 -----------------ERPDLIPAAADELMRRYP--TVAVSRNAVADVDADGVTIRKGD 302
Query: 400 HVEFYTAWLTEDPDMWSDPGEFRPERFL 427
V + DP + P E R +R L
Sbjct: 303 LVYLPSVLHNLDPASFEAPEEVRFDRGL 330
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 117/326 (35%), Gaps = 67/326 (20%)
Query: 219 PQLPDFLPILTP--LFRRQMREAKELRKRQMECLVPLIRNRKAFV----EKGQNPNSESE 272
P +P + + P L RR++ A RKR M+ + + R + E+G+ + +
Sbjct: 73 PGMPYMIDMDDPQHLLRRKLVNAGFTRKRVMDKVDSIGRLCDTLIDAVCERGEC-DFVRD 131
Query: 273 MVSPIGAAYVDSLFGLEPTGREQL---GEQEIVTLCSEVISAG----TDTSATTAEWA-- 323
+ +P+ A + + G+ PT R+ L + + L S V A DT A E+
Sbjct: 132 IAAPLPMAVIGDMLGVLPTERDMLLKWSDDLVCGLSSHVDEAAIQKLMDTFAAYTEFTKD 191
Query: 324 ------------MHHLVLNQEIQ-------EKLYKEIVAAVGKD------------GLVK 352
+ +++N E++ E +++ ++ +G D L++
Sbjct: 192 VITKRRAEPTDDLFSVLVNSEVEGQRMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLR 251
Query: 353 EED-----VEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAW 407
D V + L ++E LR P + DT G + AG +
Sbjct: 252 HRDQWDALVADVDLLPGAIEEMLRWTSPVKNM-CRTLTADTVFHGTELRAGEKIMLMFES 310
Query: 408 LTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLL 467
D ++ DP FR +R V FG G C L L + L+
Sbjct: 311 ANFDESVFGDPDNFRIDR--------------NPNSHVAFGFGTHFCLGNQLARLELRLM 356
Query: 468 IARMVHAYKWLPVPGAPPDPTETYAF 493
R++ L + P P F
Sbjct: 357 TERVLRRLPDLRLADDAPVPLRPANF 382
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 80/228 (35%), Gaps = 49/228 (21%)
Query: 245 RQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTL 304
R + LV I RK VE G + + S I A+ D + L + E+ TL
Sbjct: 205 RMFDYLVAAIEKRK--VEPGDD------LTSDIVRAFHDGV----------LDDYELRTL 246
Query: 305 CSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDA 364
+ V+ AG +T+ AM+ + + K+ +E+ E P
Sbjct: 247 VATVLVAGYETTNHQLALAMYDFAQHPDQWMKI---------------KENPELAPQ--- 288
Query: 365 VVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPE 424
V+E LR P + A +D E+ G IP G V DP +++D F
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF--- 345
Query: 425 RFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMV 472
+ FG G C +L L + +A +
Sbjct: 346 ----------DITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALA 383
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 80/228 (35%), Gaps = 49/228 (21%)
Query: 245 RQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTL 304
R + LV I RK VE G + + S I A+ D + L + E+ TL
Sbjct: 195 RMFDYLVAAIEKRK--VEPGDD------LTSDIVRAFHDGV----------LDDYELRTL 236
Query: 305 CSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDA 364
+ V+ AG +T+ AM+ + + K+ +E+ E P
Sbjct: 237 VATVLVAGYETTNHQLALAMYDFAQHPDQWMKI---------------KENPELAPQ--- 278
Query: 365 VVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPE 424
V+E LR P + A +D E+ G IP G V DP +++D F
Sbjct: 279 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF--- 335
Query: 425 RFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMV 472
+ FG G C +L L + +A +
Sbjct: 336 ----------DITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALA 373
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 98/276 (35%), Gaps = 48/276 (17%)
Query: 208 SILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFV-EKGQN 266
S+ D M + + LP +F ELR+ +E P +A+V E+ Q
Sbjct: 161 SVFPDAMGLKQEGRENLLPYAGLVFN-AFGPPNELRQSAIERSAP----HQAYVAEQCQR 215
Query: 267 PNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHH 326
PN ++P G + + TG ++ +E L ++SAG DT+ A++
Sbjct: 216 PN-----LAPGG--FGACIHAFSDTG--EITPEEAPLLVRSLLSAGLDTTVNGIAAAVYC 266
Query: 327 LVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIK 386
L + + A + D + E+ ++ V+ R +
Sbjct: 267 LAR--------FPDEFARLRADPSLARNAFEEAVRFESPVQTFFR-----------TTTR 307
Query: 387 DTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVP 446
D EL G +I G V + DP W DP + R V
Sbjct: 308 DVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR--------------KTSGHVG 353
Query: 447 FGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPG 482
FG+G +C + L +++A + + + G
Sbjct: 354 FGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAG 389
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 33/175 (18%)
Query: 294 EQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKE 353
+ L +++ C V+ G +T+ A+H L + L +DG
Sbjct: 237 DDLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTAL---------RDGSAD- 286
Query: 354 EDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD 413
+D VV+E LR P +L D + G +P+G V + DP
Sbjct: 287 --------VDTVVEEVLRWTSPAMHVL-RVTTADVTINGRDLPSGTPVVAWLPAANRDPA 337
Query: 414 MWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLI 468
+ DP F P R + + FG G C +L + +++++
Sbjct: 338 EFDDPDTFLPGR--------------KPNRHITFGHGMHHCLGSALARIELSVVL 378
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 33/177 (18%)
Query: 308 VISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVK 367
+ +AG DT+++++ A+ L N E Q L K A + + +V
Sbjct: 264 IATAGHDTTSSSSGGAIIGLSRNPE-QLALAKSDPALIPR-----------------LVD 305
Query: 368 ETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL 427
E +R P + A+ DTE+ G +I G + D +++S+P EF RF
Sbjct: 306 EAVRWTAPVKSFM-RTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF- 363
Query: 428 EXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAP 484
+ + FG G +C L L + + ++ K + + G P
Sbjct: 364 -------------PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPP 407
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 74/194 (38%), Gaps = 36/194 (18%)
Query: 294 EQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKE 353
+ L + EIV+ +++AG +T+ + L++N + + E + LV
Sbjct: 225 DHLTDAEIVSTLQLMVAAGHETTIS--------LIVNAVVNLSTHPE------QRALVLS 270
Query: 354 EDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD 413
+ E AVV+ETLR P +L A +D +G IPAG D
Sbjct: 271 GEAE----WSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAG------------DAL 314
Query: 414 MWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINL----LIA 469
+ S R ER + + FG G +CP +L + + L A
Sbjct: 315 IVSYGALGRDERAHGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYA 374
Query: 470 RMVHAYKWLPVPGA 483
R H L VP A
Sbjct: 375 RFPHLD--LAVPAA 386
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 365 VVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPE 424
V+E LR + S A +D E+GG SI AG V DP ++ DP E
Sbjct: 281 AVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVE 340
Query: 425 R 425
R
Sbjct: 341 R 341
>pdb|3S8P|A Chain A, Crystal Structure Of The Set Domain Of Human
Histone-Lysine N- Methyltransferase Suv420h1 In Complex
With S-Adenosyl-L-Methionine
pdb|3S8P|B Chain B, Crystal Structure Of The Set Domain Of Human
Histone-Lysine N- Methyltransferase Suv420h1 In Complex
With S-Adenosyl-L-Methionine
Length = 273
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 318 TTAEWAMHHLVLNQEIQEKLYKEIV 342
T+ EWA H+ + + QEKL+KE V
Sbjct: 96 TSGEWARHYFLNKNKXQEKLFKEHV 120
>pdb|1B75|A Chain A, Solution Structure Of Ribosomal Protein L25 From
Escherichia Coli
Length = 94
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 325 HHLVLNQEIQEKLYKEIVAAV--GKDGLVKEEDVEKMPY 361
H V+N + + + Y E++ V GK+ VK +DV++ PY
Sbjct: 44 HDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPY 82
>pdb|1D6K|A Chain A, Nmr Solution Structure Of The 5s Rrna E-LoopL25 COMPLEX
pdb|1DFU|P Chain P, Crystal Structure Of E.Coli Ribosomal Protein L25
Complexed With A 5s Rrna Fragment At 1.8 A Resolution
pdb|1GIY|V Chain V, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1giy, Contains The 50s Ribosome Subunit. The
30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
In The File 1gix
pdb|1ML5|VV Chain v, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
pdb|1P85|T Chain T, Real Space Refined Coordinates Of The 50s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
pdb|1P86|T Chain T, Real Space Refined Coordinates Of The 50s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
pdb|2AW4|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2AWB|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 50s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes And Is
Described In Remark 400.
pdb|1VS6|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|1VS8|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2GYA|T Chain T, Structure Of The 50s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
pdb|2GYC|T Chain T, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
pdb|2I2T|V Chain V, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2I2V|V Chain V, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2J28|V Chain V, Model Of E. Coli Srp Bound To 70s Rncs
pdb|2QOV|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 50s Subunit Of The First 70s Ribosome.
The Entire Crystal Structure Contains Two 70s Ribosomes.
pdb|2QOX|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 50s Subunit Of The Second 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes.
pdb|2QOZ|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 50s Subunit Of The
First 70s Ribosome, With Neomycin Bound. The Entire
Crystal Structure Contains Two 70s Ribosomes.
pdb|2QP1|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 50s Subunit Of The
Second 70s Ribosome, With Neomycin Bound. The Entire
Crystal Structure Contains Two 70s Ribosomes.
pdb|487D|N Chain N, Seven Ribosomal Proteins Fitted To A Cryo-Electron
Microscopic Map Of The Large 50s Subunit At 7.5
Angstroms Resolution
pdb|2QAM|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 50s Subunit Of The First 70s Ribosome, With
Neomycin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
pdb|2QAO|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 50s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
pdb|2QBA|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 50s Subunit Of The First 70s Ribosome, With
Gentamicin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
pdb|2QBC|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 50s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
pdb|2QBE|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 50s Subunit Of The
First 70s Ribosome, With Rrf Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2QBG|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 50s Subunit Of The
Second 70s Ribosome, With Rrf Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2QBI|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 50s
Subunit Of The First 70s Ribosome, With Gentamicin And
Rrf Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
pdb|2QBK|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 50s
Subunit Of The Second 70s Ribosome, With Gentamicin And
Rrf Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
pdb|2Z4L|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
50s Subunit Of The First 70s Ribosome, With Paromomycin
And Rrf Bound. The Entire Crystal Structure Contains Two
70s Ribosomes And Is Described In Remark 400.
pdb|2Z4N|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
50s Subunit Of The Second 70s Ribosome, With Paromomycin
And Rrf Bound. The Entire Crystal Structure Contains Two
70s Ribosomes And Is Described In Remark 400.
pdb|2VHM|V Chain V, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 1 Of 4)
pdb|2VHN|V Chain V, Structure Of Pdf Binding Helix In Complex With The
Ribosome. (Part 2 Of 4)
pdb|2RDO|V Chain V, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
pdb|3DF2|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 50s Subunit Of The First 70s Ribosome. The
Entire Crystal Structure Contains Two 70s Ribosomes.
pdb|3DF4|V Chain V, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 50s Subunit Of The Second 70s Ribosome. The
Entire Crystal Structure Contains Two 70s Ribosomes.
pdb|3BBX|V Chain V, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em
Map 50s.Nc-Trna.Hsp15 Complex
pdb|3FIK|V Chain V, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 50s Subunit.
pdb|3E1B|C Chain C, Structure Of The 50s Subunit Of E. Coli Ribosome In
Pre-Accommodation State
pdb|3E1D|C Chain C, Structure Of The 50s Subunit Of E. Coli Ribosome In
Post-Accommodation State
pdb|3I1N|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I1P|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I1R|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I1T|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I20|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I22|V Chain V, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3KCR|V Chain V, Ribosome-Secy Complex. This Entry 3kcr Contains 50s
Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found
In Pdb Entry 3kc4
pdb|2WWQ|W Chain W, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 50s, The P-Site
Trna And The Tnac Leader Peptide (Part 2 Of 2).
pdb|1VT2|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 50s Subunit Of The
Second 70s Ribosome.
pdb|3ORB|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 50s Subunit Of The First
70s Ribosome Bound To Cem-101.
pdb|3OFQ|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 50s Subunit Of The
Second 70s Ribosome.
pdb|3OFR|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 50s Subunit Of The
First 70s Ribosome With Erthromycin Bound.
pdb|3OFC|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 50s Subunit Of
The First 70s Ribosome With Chloramphenicol Bound.
pdb|3OFD|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 50s Subunit Of
The Second 70s Ribosome.
pdb|3OFZ|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 50s Subunit Of The
First 70s Ribosome Bound To Clindamycin.
pdb|3OG0|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 50s Subunit Of The
Second 70s Ribosome.
pdb|3OAS|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 50s Subunit Of The
Second 70s Ribosome.
pdb|3OAT|V Chain V, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 50s Subunit Of The
First 70s Ribosome With Telithromycin Bound.
pdb|3IZT|W Chain W, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Large Subunit Of A Ribosome Programmed With A
Near-Cognate Codon.
pdb|3IZU|W Chain W, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Large Subunit Of A Ribosome Programmed With A Cognate
Codon
pdb|3J01|V Chain V, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
pdb|3R8S|V Chain V, Structures Of The Bacterial Ribosome In Classical And
Hybrid States Of Trna Binding
pdb|3R8T|V Chain V, Structures Of The Bacterial Ribosome In Classical And
Hybrid States Of Trna Binding
pdb|3SGF|Z Chain Z, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp
State On A Rotated Conformation Of The Ribosome
pdb|3UOS|Z Chain Z, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp
State On A Rotated Conformation Of The Ribosome (Without
Viomycin)
pdb|3J0T|X Chain X, Structural Characterization Of Mrna-Trna Translocation
Intermediates (50s Ribosome Of Class2 Of The Six
Classes)
pdb|3J0W|X Chain X, Structural Characterization Of Mrna-Trna Translocation
Intermediates (50s Ribosome Of Class 4a Of The Six
Classes)
pdb|3J0Y|X Chain X, Structural Characterization Of Mrna-Trna Translocation
Intermediates (50s Ribosome Of Class 4b Of The Six
Classes)
pdb|3J11|X Chain X, Structural Characterization Of Mrna-Trna Translocation
Intermediates (50s Ribosome Of Class 3 Of The Six
Classes)
pdb|3J12|X Chain X, Structural Characterization Of Mrna-Trna Translocation
Intermediates (50s Ribosome Of Class 5 Of The Six
Classes)
pdb|3J14|X Chain X, Structural Characterization Of Mrna-Trna Translocation
Intermediates (50s Ribosome Of Class 6 Of The Six
Classes)
pdb|3J19|V Chain V, Structure Of The Bacterial Ribosome Complexed By
Tmrna-Smpb And Ef-G During Translocation And Mld-Loading
(50s Subunit)
pdb|4GAR|V Chain V, Allosteric Control Of The Ribosome By Small-Molecule
Antibiotics
pdb|4GAU|V Chain V, Allosteric Control Of The Ribosome By Small-Molecule
Antibiotics
Length = 94
Score = 30.8 bits (68), Expect = 1.9, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 325 HHLVLNQEIQEKLYKEIVAAV--GKDGLVKEEDVEKMPY 361
H V+N + + + Y E++ V GK+ VK +DV++ PY
Sbjct: 44 HDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPY 82
>pdb|2WPN|B Chain B, Structure Of The Oxidised, As-Isolated Nifese Hydrogenase
From D. Vulgaris Hildenborough
Length = 482
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 21/122 (17%)
Query: 274 VSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEI 333
+SP+G + LFG+ LGE+ +L ++ +T + M +
Sbjct: 327 LSPVGKKLLKDLFGISAKKFRDLGEEAAFSLMGRHVARAEET------YYMLGAI----- 375
Query: 334 QEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGY 393
E KEI A ED MP + A + T P LL + +KD+++ Y
Sbjct: 376 -EGWLKEIKAG---------EDTVVMPAVPASAEGTGFTEAPRGSLLHYVKVKDSKIDNY 425
Query: 394 SI 395
I
Sbjct: 426 QI 427
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 292 GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLV 351
GR ++GE E V L + G + + M +L+L + +E++A +
Sbjct: 226 GRGEVGETEAVGLAGPLQIGGEAVTHNVGQ--MLYLLLTR-------RELMARM------ 270
Query: 352 KEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG--VHVEFYTAWLT 409
+E + LD +++ R G L+ A++D E+ G I AG V+V + A
Sbjct: 271 RERPGARGTALDELLRWISHRTSVG---LARIALEDVEVHGTRIAAGEPVYVSYLAA--N 325
Query: 410 EDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLI 468
DPD++ DP +R + +G G C L + LL+
Sbjct: 326 RDPDVFPDPDRIDLDR--------------DPNPHLAYGNGHHFCTGAVLARMQTELLV 370
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 367 KETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE-FRPER 425
+E LR +PP ++L+ + LG +P G + + ++T+ ++ GE F+PER
Sbjct: 259 QEALRLYPPA-WILTRRLERPLLLGEDRLPQGTTL-VLSPYVTQR--LYFPEGEAFQPER 314
Query: 426 FLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVP 481
FL + PFG G+R+C +L +++ ++ P+P
Sbjct: 315 FL-------AERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLP 363
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 19/130 (14%)
Query: 296 LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEED 355
L +++I+ L V+ A T+ + T ++HL+ N E ++ + LV
Sbjct: 254 LSDKDILALILNVLLAATEPADKTLALMIYHLLNNPE-------QMNDVLADRSLVPR-- 304
Query: 356 VEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW 415
+ ETLR PP L+ +DT +GG I V DP+ +
Sbjct: 305 ---------AIAETLRYKPPVQ-LIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAF 354
Query: 416 SDPGEFRPER 425
P F R
Sbjct: 355 EQPDVFNIHR 364
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 292 GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLV 351
GR ++GE E V L + G + + M +L+L + +E++A +
Sbjct: 226 GRGEVGETEAVGLAGPLQIGGEAVTHNVGQ--MLYLLLTR-------RELMARM------ 270
Query: 352 KEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG--VHVEFYTAWLT 409
+E + LD +++ R G L+ A++D E+ G I AG V+V + A
Sbjct: 271 RERPGARGTALDELLRWISHRTSVG---LARIALEDVEVHGTRIAAGEPVYVSYLAA--N 325
Query: 410 EDPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLI 468
DPD++ DP +R + +G G C L + LL+
Sbjct: 326 RDPDVFPDPDRIDLDR--------------DPNPHLAYGNGHHFCTGAVLARMQTELLV 370
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 33/160 (20%)
Query: 301 IVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMP 360
IV C +++AG +T+ A+ L ++++ ++L E P
Sbjct: 244 IVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDEL---------------RTTPESTP 288
Query: 361 YLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE 420
A V+E +R PP ++ A +D LG + IP G V DP + DP
Sbjct: 289 ---AAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDV 344
Query: 421 FRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLG 460
R E + V FG G C +L
Sbjct: 345 LDVHRAAE--------------RQVGFGLGIHYCLGATLA 370
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 20/139 (14%)
Query: 351 VKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTE 410
++EE++ YL A+ +E LR PP + + +LG +I G +V + A
Sbjct: 234 IREENL----YLKAI-EEALRYSPPVMRTVRKTKER-VKLGDQTIEEGEYVRVWIASANR 287
Query: 411 DPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIAR 470
D +++ D +F P+R + FG+G +C L L + I
Sbjct: 288 DEEVFHDGEKFIPDR--------------NPNPHLSFGSGIHLCLGAPLARLEARIAIEE 333
Query: 471 MVHAYKWLPVPGAPPDPTE 489
++ + + P E
Sbjct: 334 FSKRFRHIEILDTEKVPNE 352
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 20/139 (14%)
Query: 351 VKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTE 410
++EE++ YL A+ +E LR PP + + +LG +I G +V + A
Sbjct: 234 IREENL----YLKAI-EEALRYSPPVMRTVRKTKER-VKLGDQTIEEGEYVRVWIASANR 287
Query: 411 DPDMWSDPGEFRPERFLEXXXXXXXXXXXXXXKMVPFGAGRRICPAWSLGILHINLLIAR 470
D +++ D +F P+R + FG+G +C L L + I
Sbjct: 288 DEEVFHDGEKFIPDR--------------NPNPHLSFGSGIHLCLGAPLARLEARIAIEE 333
Query: 471 MVHAYKWLPVPGAPPDPTE 489
++ + + P E
Sbjct: 334 FSKRFRHIEILDTEKVPNE 352
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 279 AAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAM 324
AAY D L G G LG +IV + VIS G T T A+W++
Sbjct: 78 AAYADGLPGAVAAG---LGRLDIVVNNAGVISRGRITETTDADWSL 120
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 76/213 (35%), Gaps = 36/213 (16%)
Query: 208 SILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFV-EKGQN 266
S+ D M + LP +F ELR+ +E P +A+V E+ Q
Sbjct: 159 SVFPDAMGLKQEGREHLLPYAGLVFN-AFGPPNELRQTAIERSAP----HQAYVNEQCQR 213
Query: 267 PNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHH 326
PN ++P G F T ++ E L ++SAG DT+ A++
Sbjct: 214 PN-----LAPGGFGACIHAF----TDTGEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYC 264
Query: 327 LV-LNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAI 385
L E+Q + D + E+ ++ V+ R
Sbjct: 265 LARFPGELQR---------LRSDPTLARNAFEEAVRFESPVQTFFR-----------TTT 304
Query: 386 KDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDP 418
++ ELGG I G V + DP WSDP
Sbjct: 305 REVELGGAVIGEGEKVLMFLGSANRDPRRWSDP 337
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 295 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEE 354
+L +E++ + ++ AG +T+ M+ L+ + + +AA+ D
Sbjct: 247 RLTSEELLGMAHILLVAGHETTVNLIANGMYALLS--------HPDQLAALRAD------ 292
Query: 355 DVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDM 414
M LD V+E LR P ++ +L G IPAG V A P+
Sbjct: 293 ----MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPER 348
Query: 415 WSDPGEF 421
+ DP F
Sbjct: 349 FPDPHRF 355
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 23/57 (40%)
Query: 365 VVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEF 421
V+E LR G F A +D ELGG I G V + DP +P F
Sbjct: 273 AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF 329
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 295 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEE 354
+L +E++ + ++ AG +T+ M+ L+ + + +AA+ D
Sbjct: 247 RLTSEELLGMAHILLVAGHETTVNLIANGMYALLS--------HPDQLAALRAD------ 292
Query: 355 DVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDM 414
M LD V+E LR P ++ +L G IPAG V A P+
Sbjct: 293 ----MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPER 348
Query: 415 WSDPGEF 421
+ DP F
Sbjct: 349 FPDPHRF 355
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 299 QEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEK 358
+++++ I+AG +T+ + + L+ E+ +L K D +
Sbjct: 237 EQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRK---------------DPDL 281
Query: 359 MPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDP 418
MP A V E LR + A +D EL G ++PA V A DP+ + DP
Sbjct: 282 MP---AAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDP 338
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 295 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEE 354
+L +E++ + ++ AG +T+ M+ L+ + + +AA+ D
Sbjct: 247 RLTSEELLGMAHILLVAGHETTVNLIANGMYALLS--------HPDQLAALRAD------ 292
Query: 355 DVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDM 414
M LD V+E LR P ++ +L G IPAG V A P+
Sbjct: 293 ----MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPER 348
Query: 415 WSDPGEF 421
+ DP F
Sbjct: 349 FPDPHRF 355
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 23/57 (40%)
Query: 365 VVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEF 421
V+E LR G F A +D ELGG I G V + DP +P F
Sbjct: 273 AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF 329
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 23/57 (40%)
Query: 365 VVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEF 421
V+E LR G F A +D ELGG I G V + DP +P F
Sbjct: 273 AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF 329
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,467,694
Number of Sequences: 62578
Number of extensions: 634679
Number of successful extensions: 1639
Number of sequences better than 100.0: 158
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 1336
Number of HSP's gapped (non-prelim): 186
length of query: 508
length of database: 14,973,337
effective HSP length: 103
effective length of query: 405
effective length of database: 8,527,803
effective search space: 3453760215
effective search space used: 3453760215
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)