Query         036686
Match_columns 508
No_of_seqs    190 out of 1936
Neff          11.4
Searched_HMMs 46136
Date          Fri Mar 29 04:30:53 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036686.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036686hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 9.8E-85 2.1E-89  612.2  45.1  454   31-508    25-487 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 2.4E-79 5.2E-84  600.2  48.4  465   29-508    54-533 (543)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 2.6E-79 5.7E-84  565.6  43.6  447   33-508    32-498 (499)
  4 PLN00168 Cytochrome P450; Prov 100.0 2.3E-78 4.9E-83  592.1  50.5  478   26-508    29-516 (519)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 1.7E-77 3.6E-82  585.7  46.7  492    1-508     1-508 (517)
  6 PLN03112 cytochrome P450 famil 100.0   5E-77 1.1E-81  583.7  50.2  490    5-508     5-507 (514)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 4.1E-77 8.8E-82  579.1  46.9  473   19-508    18-496 (504)
  8 PLN02394 trans-cinnamate 4-mon 100.0 6.5E-77 1.4E-81  581.9  48.4  468   27-508    25-501 (503)
  9 PLN03234 cytochrome P450 83B1; 100.0 4.8E-77   1E-81  582.2  46.7  463   29-508    25-498 (499)
 10 PTZ00404 cytochrome P450; Prov 100.0 8.8E-77 1.9E-81  577.8  46.1  453   25-508    22-482 (482)
 11 PLN02183 ferulate 5-hydroxylas 100.0 1.9E-76 4.2E-81  578.0  46.0  462   30-508    34-511 (516)
 12 PLN02966 cytochrome P450 83A1  100.0 5.2E-75 1.1E-79  566.6  46.5  459   29-506    26-497 (502)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 6.3E-76 1.4E-80  565.4  34.2  454   30-508    33-495 (497)
 14 PLN02290 cytokinin trans-hydro 100.0 1.1E-74 2.3E-79  567.5  42.5  452   30-508    40-514 (516)
 15 PLN02500 cytochrome P450 90B1  100.0 1.9E-74 4.1E-79  561.5  42.4  445   28-507    34-488 (490)
 16 PLN02655 ent-kaurene oxidase   100.0 2.6E-74 5.6E-79  556.4  42.7  450   34-508     1-463 (466)
 17 KOG0159 Cytochrome P450 CYP11/ 100.0 6.5E-74 1.4E-78  516.5  36.6  456   29-508    47-517 (519)
 18 PLN02774 brassinosteroid-6-oxi 100.0 5.1E-74 1.1E-78  553.9  38.5  456    4-507     3-462 (463)
 19 PLN03018 homomethionine N-hydr 100.0 1.7E-72 3.7E-77  547.2  48.8  467   30-508    38-523 (534)
 20 PLN02169 fatty acid (omega-1)- 100.0 1.6E-72 3.5E-77  545.8  40.6  449   33-508    32-499 (500)
 21 PF00067 p450:  Cytochrome P450 100.0 4.2E-74 9.1E-79  562.8  28.8  453   34-505     1-463 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 4.1E-72 8.9E-77  548.7  39.3  452   34-508    32-515 (516)
 23 PLN02738 carotene beta-ring hy 100.0 7.7E-71 1.7E-75  540.9  41.6  439   52-508   149-594 (633)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 5.6E-71 1.2E-75  531.6  39.5  440   28-508     3-449 (452)
 25 PLN02196 abscisic acid 8'-hydr 100.0 1.4E-70 3.1E-75  529.4  39.5  427   28-507    31-461 (463)
 26 PLN02302 ent-kaurenoic acid ox 100.0 7.7E-70 1.7E-74  532.1  43.8  443   26-508    36-487 (490)
 27 PLN02987 Cytochrome P450, fami 100.0 6.4E-70 1.4E-74  522.4  42.1  458    7-508     6-468 (472)
 28 KOG0684 Cytochrome P450 [Secon 100.0 1.2E-70 2.6E-75  482.5  32.9  446   32-508    31-484 (486)
 29 PLN02936 epsilon-ring hydroxyl 100.0 3.4E-70 7.4E-75  529.9  39.6  459   35-508    15-481 (489)
 30 PLN02426 cytochrome P450, fami 100.0 4.3E-66 9.3E-71  499.9  41.9  435   40-508    49-499 (502)
 31 PLN02648 allene oxide synthase 100.0 1.7E-60 3.7E-65  453.2  31.6  415   28-484    13-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.1E-53 2.4E-58  402.3  32.5  379   59-507    27-409 (411)
 33 PF09201 SRX:  SRX;  InterPro:   64.7     5.8 0.00012   30.3   2.2   23  452-474    18-40  (148)
 34 PF08492 SRP72:  SRP72 RNA-bind  63.9     5.4 0.00012   25.6   1.7    8  422-429    44-51  (59)
 35 PF12508 DUF3714:  Protein of u  63.8     2.1 4.6E-05   35.7  -0.2   44  358-403    51-94  (200)
 36 PF12554 MOZART1:  Mitotic-spin  62.2      34 0.00073   21.0   4.7   42  300-341     6-47  (48)
 37 PHA02681 ORF089 virion membran  60.5      26 0.00057   23.9   4.4   27    1-27      1-27  (92)
 38 KOG3653 Transforming growth fa  53.6      40 0.00087   32.3   6.0   38   66-103   222-259 (534)
 39 PF05952 ComX:  Bacillus compet  50.5      17 0.00037   23.2   2.2   24  323-346     5-28  (57)
 40 PF10272 Tmpp129:  Putative tra  44.2      51  0.0011   30.7   5.2   47   39-85    108-156 (358)
 41 TIGR03779 Bac_Flav_CT_M Bacter  41.5     6.8 0.00015   36.8  -0.7   44  358-403   254-297 (410)
 42 KOG3506 40S ribosomal protein   40.8      13 0.00028   23.1   0.7   11  445-455    12-22  (56)
 43 COG0851 MinE Septum formation   40.0      58  0.0012   22.9   3.7   18  330-347    35-52  (88)
 44 PLN02196 abscisic acid 8'-hydr  38.4      47   0.001   32.6   4.5   41    1-41      1-41  (463)
 45 PHA03049 IMV membrane protein;  34.5 1.4E+02   0.003   19.7   4.6   30    8-38      8-37  (68)
 46 PF12444 Sox_N:  Sox developmen  33.9      26 0.00057   24.5   1.4   20  462-481    60-79  (84)
 47 PF14129 DUF4296:  Domain of un  32.9 1.8E+02  0.0039   20.6   6.0   50  296-345    29-78  (87)
 48 PF15050 SCIMP:  SCIMP protein   30.9 1.5E+02  0.0032   22.3   4.8   18   29-46     65-83  (133)
 49 PF15206 FAM209:  FAM209 family  30.5      48   0.001   25.5   2.3   33   11-43     45-77  (150)
 50 PRK06789 flagellar motor switc  28.9      58  0.0012   22.2   2.3   41  365-405    21-63  (74)
 51 PF05961 Chordopox_A13L:  Chord  28.6 1.8E+02  0.0039   19.3   4.5   16    8-23      8-23  (68)
 52 PHA02902 putative IMV membrane  28.2 1.5E+02  0.0032   19.4   3.8    6   60-65     59-64  (70)
 53 PF13625 Helicase_C_3:  Helicas  27.8 1.6E+02  0.0034   22.8   5.0   40   54-95     74-113 (129)
 54 PRK13991 cell division topolog  27.5 1.6E+02  0.0034   21.0   4.3   18  330-347    35-52  (87)
 55 COG3954 PrkB Phosphoribulokina  26.4 1.8E+02   0.004   24.2   5.1   62  311-372    16-89  (289)
 56 PF15080 DUF4547:  Domain of un  26.1 3.4E+02  0.0075   21.7  13.5   50  295-344   112-171 (196)
 57 PF09926 DUF2158:  Uncharacteri  25.8      72  0.0016   20.1   2.2   17   68-84      4-20  (53)
 58 KOG0114 Predicted RNA-binding   25.6 2.8E+02  0.0061   20.5   5.4   59   30-93     10-74  (124)
 59 PF14483 Cut8_M:  Cut8 dimerisa  24.4 1.5E+02  0.0033   17.1   3.3   17  323-339    18-35  (38)
 60 COG1707 ACT domain-containing   23.2 1.1E+02  0.0024   24.5   3.2   38   53-90    153-195 (218)
 61 PF11227 DUF3025:  Protein of u  23.1      46   0.001   28.1   1.3   23  403-425   188-211 (212)
 62 PF15300 INT_SG_DDX_CT_C:  INTS  22.5      44 0.00096   22.1   0.9   16  358-373    39-54  (65)
 63 PRK13664 hypothetical protein;  21.9 1.6E+02  0.0034   18.7   3.0    7   32-38     38-44  (62)
 64 PRK13988 cell division topolog  21.9 2.5E+02  0.0054   20.5   4.5   18  330-347    37-54  (97)
 65 PF15330 SIT:  SHP2-interacting  21.9 2.7E+02  0.0059   20.7   4.9   10   39-48     45-54  (107)
 66 PF09105 SelB-wing_1:  Elongati  20.9 1.6E+02  0.0034   17.8   2.8   21  295-315    28-48  (61)
 67 PRK13987 cell division topolog  20.8 2.2E+02  0.0047   20.5   4.0   18  330-347    33-50  (91)
 68 PF07886 BA14K:  BA14K-like pro  20.3      86  0.0019   17.2   1.5   16  440-455    16-31  (31)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.8e-85  Score=612.16  Aligned_cols=454  Identities=37%  Similarity=0.597  Sum_probs=391.4

Q ss_pred             CCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCce
Q 036686           31 KNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIR  110 (508)
Q Consensus        31 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~  110 (508)
                      .+.||||.+||++||++++...  ..|..+.+|.++||||+++++|..++|||+|++.++++|.+++..|+.++......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            7889999999999999998544  58888999999999999999999999999999999999999999999998721122


Q ss_pred             EEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhh
Q 036686          111 LVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILI  190 (508)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~  190 (508)
                      ..+..+..++.++++|+.|+.+||..+..+++...++.......++++.+++.+.+ .+. +++||+...+..++.++++
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~-~~~vdl~~~l~~~~~nvI~  180 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKK-GEPVDLSELLDLLVGNVIC  180 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCC-CceeeHHHHHHHHHHHHHH
Confidence            23444666888888999999999999999999999999988889999999999987 333 3799999999999999999


Q ss_pred             hhhcccccch---HHHHHHHHHHHHHHHhcCC-Ccccccc-cchhhh--HhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          191 CLCFGAKISE---ERIKHIESILKDVMLITSP-QLPDFLP-ILTPLF--RRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       191 ~~~fg~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~p-~l~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      +++||.++..   +....+.+...+....... .+.+++| ++....  .+..+.......++.+++++.++++++..  
T Consensus       181 ~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~--  258 (489)
T KOG0156|consen  181 RMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI--  258 (489)
T ss_pred             HHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh--
Confidence            9999999964   4445577888887777766 6778888 444332  13445666666678999999999988854  


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCCCC-CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGRE-QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIV  342 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~  342 (508)
                       +    .++.  .   |++|.+++...+++. .++++++...++++++||+|||++|+.|++.+|++||++|+|+++||+
T Consensus       259 -~----~~~~--~---D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId  328 (489)
T KOG0156|consen  259 -G----DEEG--R---DFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEID  328 (489)
T ss_pred             -c----cCCC--C---cHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence             1    1111  2   899999987664333 389999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCC
Q 036686          343 AAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFR  422 (508)
Q Consensus       343 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  422 (508)
                      +++|.++.++.+|+.+||||+|||+|++|++|++|..++|.+++|+.++||.|||||.|+++.+++||||++|+||++|+
T Consensus       329 ~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~  408 (489)
T KOG0156|consen  329 EVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFK  408 (489)
T ss_pred             HHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccC
Confidence            99999988999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCC-CCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCce
Q 036686          423 PERFLEGD-GVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSL  501 (508)
Q Consensus       423 p~R~l~~~-~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (508)
                      ||||++++ .     +. ....++|||.|+|.|||..+|.+++.++++.++++|+|++.++ .++..+.. .++..+.++
T Consensus       409 PERFl~~~d~-----~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~~-~~~~~~~pl  480 (489)
T KOG0156|consen  409 PERFLDSNDG-----KG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEAG-LTLKKKKPL  480 (489)
T ss_pred             hhhhcCCccc-----cC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCcccc-cceecCCcc
Confidence            99999985 2     22 4678999999999999999999999999999999999999877 54555553 777888888


Q ss_pred             eEEeecC
Q 036686          502 KAVILPR  508 (508)
Q Consensus       502 ~v~~~~r  508 (508)
                      .+...+|
T Consensus       481 ~~~~~~r  487 (489)
T KOG0156|consen  481 KAVPVPR  487 (489)
T ss_pred             eeeeecC
Confidence            8877765


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.4e-79  Score=600.20  Aligned_cols=465  Identities=25%  Similarity=0.403  Sum_probs=363.3

Q ss_pred             CCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhC-CeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           29 GPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYG-PIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        29 ~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      .+.+.||||.++|++|+++.+..+ ...+..+.++.++|| +++++++|+.++++|+||+.++++|.+++..|..++...
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~-~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKN-RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccC-CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            356789999999999999877543 235667899999999 799999999999999999999999998888898887533


Q ss_pred             CceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHh
Q 036686          108 PIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICS  187 (508)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~  187 (508)
                      .. ..++.+..++.+..+|+.|+++||.+..+++++...+.+.+.++++++.+++.+...... ++++|+.+.+..++++
T Consensus       133 ~~-~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~vd~~~~~~~~t~~  210 (543)
T PLN02971        133 AQ-KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKN-SEPVDLRFVTRHYCGN  210 (543)
T ss_pred             ch-hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceehHHHHHHHHHH
Confidence            22 223333223445557999999999887777877777778888888888888877654333 5679999999999999


Q ss_pred             hhhhhhcccccchH-------HHHHHHHHHHHHHHhcC----CCcccccccchhhhH-hHHHHHHHHHHHHHHHhHHHHH
Q 036686          188 ILICLCFGAKISEE-------RIKHIESILKDVMLITS----PQLPDFLPILTPLFR-RQMREAKELRKRQMECLVPLIR  255 (508)
Q Consensus       188 ~~~~~~fg~~~~~~-------~~~~~~~~~~~~~~~~~----~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~i~  255 (508)
                      +++.++||.++...       ......+....++....    ..+.+++|++.++.. +..+...+..+.+.+++.+.++
T Consensus       211 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  290 (543)
T PLN02971        211 AIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIID  290 (543)
T ss_pred             HHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999876211       11112222233322111    123345565543311 2233455566778888888888


Q ss_pred             HHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCC-CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHH
Q 036686          256 NRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGRE-QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQ  334 (508)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~  334 (508)
                      ++++....+.      .....   |+++.+++...+++. .++++++++++.++++||+|||+++++|++++|++||++|
T Consensus       291 ~~~~~~~~~~------~~~~~---d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq  361 (543)
T PLN02971        291 ERIKMWREGK------RTQIE---DFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEIL  361 (543)
T ss_pred             HHHHHHhccC------CCCCc---CHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHH
Confidence            8766432111      01112   899999976433222 4999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCC
Q 036686          335 EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDM  414 (508)
Q Consensus       335 ~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~  414 (508)
                      +|+|+||++++++++.++++++++|||++|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++
T Consensus       362 ~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~  441 (543)
T PLN02971        362 HKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKV  441 (543)
T ss_pred             HHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhh
Confidence            99999999999988889999999999999999999999999998788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCC-CCCCCcccce
Q 036686          415 WSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGA-PPDPTETYAF  493 (508)
Q Consensus       415 ~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~-~~~~~~~~~~  493 (508)
                      |+||++|+||||++++.+..  ....+..|+|||+|+|+|+|++||+.|+++++++|+++|++++.++. .....+..+ 
T Consensus       442 ~~dP~~F~PeRfl~~~~~~~--~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-  518 (543)
T PLN02971        442 WSDPLSFKPERHLNECSEVT--LTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-  518 (543)
T ss_pred             CCCccccCcccCCCCCcccc--ccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-
Confidence            99999999999997643110  11235689999999999999999999999999999999999988654 444444555 


Q ss_pred             eeeecCceeEEeecC
Q 036686          494 TVVMKNSLKAVILPR  508 (508)
Q Consensus       494 ~~~~~~~~~v~~~~r  508 (508)
                      ++..++++.|.++||
T Consensus       519 ~~~~~~~~~~~~~~~  533 (543)
T PLN02971        519 DMFLSKPLVMVGELR  533 (543)
T ss_pred             cccccccceeeeeec
Confidence            776678999999987


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-79  Score=565.61  Aligned_cols=447  Identities=24%  Similarity=0.393  Sum_probs=347.7

Q ss_pred             CCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCC--CCCCCce
Q 036686           33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASR--PPDSPIR  110 (508)
Q Consensus        33 ~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~--~~~~~~~  110 (508)
                      ..|+|+++|++|++..+...... .....+...++|+++.++.+.+|.++|+||+.+++|+.++.++|..+  +....-.
T Consensus        32 Gi~~~~p~p~~Gn~~~~~~~~~~-~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~  110 (499)
T KOG0158|consen   32 GIPGPKPLPFLGNLPGMLKRERP-GDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPE  110 (499)
T ss_pred             CCCCCCCCCcEecHHHHHhccCc-HHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCC
Confidence            58999999999999988765434 33344444455999999999999999999999999999999999884  3322111


Q ss_pred             EEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhh
Q 036686          111 LVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILI  190 (508)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~  190 (508)
                      .  .....++++ ..|+.||++|..+ +|.|++..++.+.+.+++..+.+++.+...... +..+++.+.+..++.|+|+
T Consensus       111 ~--~l~~~~Lf~-~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~-~~~~~~~dl~~~yT~DVI~  185 (499)
T KOG0158|consen  111 D--PLSALNLFF-LRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEG-GQEGEIKDLCARYTTDVIG  185 (499)
T ss_pred             C--cccccCchh-ccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc-cCCccHHHHHHHHHHHHHh
Confidence            1  111123333 3799999999865 899999999999999999999999999886543 2577888888899999999


Q ss_pred             hhhcccccchHH--HHHHHHHHHHHHHhcCC--Cc----ccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 036686          191 CLCFGAKISEER--IKHIESILKDVMLITSP--QL----PDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVE  262 (508)
Q Consensus       191 ~~~fg~~~~~~~--~~~~~~~~~~~~~~~~~--~~----~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (508)
                      +++||.+.+.-.  ...+.............  .+    ...+|.+...+     +.........+++.+.+....+..+
T Consensus       186 ~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l-----~~~~~~~~~~~~~~~~v~~~v~~R~  260 (499)
T KOG0158|consen  186 SCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL-----RVKLFPEDVTDFFRKLVNSRVEQRE  260 (499)
T ss_pred             HhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh-----hcccChHHHHHHHHHHHHHHHHHHH
Confidence            999999875422  12222222222222111  00    11122221110     1122223344445555544444331


Q ss_pred             hCCCCCCCCccccccchhhHHhhhcCCCC---CCC---CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHH
Q 036686          263 KGQNPNSESEMVSPIGAAYVDSLFGLEPT---GRE---QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEK  336 (508)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~---~~~---~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~  336 (508)
                             .++....   |+++.+++...+   +..   .+|.+|++++|+.|++||.||||+++++++|+||+||++|+|
T Consensus       261 -------~~~~~r~---Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~k  330 (499)
T KOG0158|consen  261 -------KENIERN---DFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDK  330 (499)
T ss_pred             -------hcCCCCc---hHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHH
Confidence                   1222333   899999987642   111   499999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccC-CeeeCCCCEEEEcccccccCCCCC
Q 036686          337 LYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELG-GYSIPAGVHVEFYTAWLTEDPDMW  415 (508)
Q Consensus       337 lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~~~  415 (508)
                      +||||++++.+.+.+++|.+++|+||++||+||||+||+++. +.|.+++|++++ ++.||||+.|.++++++||||++|
T Consensus       331 LreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~  409 (499)
T KOG0158|consen  331 LREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYW  409 (499)
T ss_pred             HHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccC
Confidence            999999998776669999999999999999999999999998 789999999999 999999999999999999999999


Q ss_pred             CCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCccc---c
Q 036686          416 SDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETY---A  492 (508)
Q Consensus       416 ~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~---~  492 (508)
                      |||++|+||||.+++.+     ..++..|+|||.|||.|+|.+||++|+|+.|++||++|+++.++ ...+. ...   +
T Consensus       410 p~Pe~F~PERF~~~~~~-----~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~-~~~~~~~  482 (499)
T KOG0158|consen  410 PEPEKFKPERFEEENNK-----SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIP-LEGDPKG  482 (499)
T ss_pred             CCcccCCCccCCCCccc-----ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCc-ccCCccc
Confidence            99999999999988653     24678999999999999999999999999999999999999998 33333 444   7


Q ss_pred             eeeeecCceeEEeecC
Q 036686          493 FTVVMKNSLKAVILPR  508 (508)
Q Consensus       493 ~~~~~~~~~~v~~~~r  508 (508)
                      +++.|++|+.+++++|
T Consensus       483 ~~l~pk~gi~Lkl~~r  498 (499)
T KOG0158|consen  483 FTLSPKGGIWLKLEPR  498 (499)
T ss_pred             eeeecCCceEEEEEeC
Confidence            8899999999999987


No 4  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.3e-78  Score=592.06  Aligned_cols=478  Identities=40%  Similarity=0.710  Sum_probs=371.2

Q ss_pred             CCCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCC
Q 036686           26 TGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPP  105 (508)
Q Consensus        26 ~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~  105 (508)
                      ..+...+.||||+++|++|++..+.....+.+..+.+++++||++|++++|+.++++|+||+.+++++.+++..|..++.
T Consensus        29 ~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~  108 (519)
T PLN00168         29 GGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPA  108 (519)
T ss_pred             CCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCc
Confidence            33345678999999999999876543334577789999999999999999999999999999999999988888887765


Q ss_pred             CCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHH
Q 036686          106 DSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTI  185 (508)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~  185 (508)
                      .... ..++.+...+.+..+|+.|+++||.+..++|++.+++.+.+.+.+.++.+++.+...... +..+|+.+.+..++
T Consensus       109 ~~~~-~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~-~~~v~~~~~~~~~~  186 (519)
T PLN00168        109 VASS-RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAED-AAAPRVVETFQYAM  186 (519)
T ss_pred             ccch-hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCcCHHHHHHHHH
Confidence            3221 123322223333357999999998788999999999999999999999999999765432 45689999999999


Q ss_pred             HhhhhhhhcccccchHHHHHHHHHHHHHHHhcCC--Ccccccccchhhh-HhHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 036686          186 CSILICLCFGAKISEERIKHIESILKDVMLITSP--QLPDFLPILTPLF-RRQMREAKELRKRQMECLVPLIRNRKAFVE  262 (508)
Q Consensus       186 ~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (508)
                      .++++.++||.++++.....+......+......  .+..++|.+.+.. ...+++..+..+.+.+++.+.++++++..+
T Consensus       187 ~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (519)
T PLN00168        187 FCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKN  266 (519)
T ss_pred             HHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999988654333333333333221211  2334556543222 223455566788888899999988776432


Q ss_pred             hCCC-C-CCCC-ccccccchhhHHhhhcCCCC--CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHH
Q 036686          263 KGQN-P-NSES-EMVSPIGAAYVDSLFGLEPT--GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKL  337 (508)
Q Consensus       263 ~~~~-~-~~~~-~~~~~~~~~~~~~ll~~~~~--~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~l  337 (508)
                      ..++ . .... .....   |+++.+++....  ....++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       267 ~~~~~~~~~~~~~~~~~---d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl  343 (519)
T PLN00168        267 HLGQGGEPPKKETTFEH---SYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKL  343 (519)
T ss_pred             hccccCccccccccccc---cHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHH
Confidence            1100 0 0000 00122   788888865422  1226999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCC-CCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCC
Q 036686          338 YKEIVAAVGKD-GLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWS  416 (508)
Q Consensus       338 r~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  416 (508)
                      ++||+++++++ +.++++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|+
T Consensus       344 ~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~  423 (519)
T PLN00168        344 HDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWE  423 (519)
T ss_pred             HHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccC
Confidence            99999999764 56899999999999999999999999999877899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCC-CccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceee
Q 036686          417 DPGEFRPERFLEGDGV-DVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTV  495 (508)
Q Consensus       417 ~p~~F~p~R~l~~~~~-~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  495 (508)
                      ||++|+||||++++.. ..+....+...|+|||+|+|+|+|++||++|+++++++|+++|+|++.++...+......++.
T Consensus       424 ~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  503 (519)
T PLN00168        424 RPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTT  503 (519)
T ss_pred             CccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEE
Confidence            9999999999975321 111111234689999999999999999999999999999999999988754433333345677


Q ss_pred             eecCceeEEeecC
Q 036686          496 VMKNSLKAVILPR  508 (508)
Q Consensus       496 ~~~~~~~v~~~~r  508 (508)
                      .++++++|++++|
T Consensus       504 ~~~~~~~~~~~~R  516 (519)
T PLN00168        504 VMAKPLRARLVPR  516 (519)
T ss_pred             eecCCcEEEEEec
Confidence            8888999999987


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.7e-77  Score=585.69  Aligned_cols=492  Identities=29%  Similarity=0.507  Sum_probs=376.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHh--cCCCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCe
Q 036686            1 MDLIDLVILISGFIFLCLWWRYSS--TTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQR   78 (508)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~   78 (508)
                      |++....+++++++.++.++.++.  +.++++.+.||||.++|++|+++.+.   .+.+..+.+++++||++|++++|+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~   77 (517)
T PLN02687          1 MDLPLPLLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLG---PKPHHTMAALAKTYGPLFRLRFGFV   77 (517)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcC---CchhHHHHHHHHHhCCeeEEecCCc
Confidence            554444444444444444444333  33334556799999999999987764   2466789999999999999999999


Q ss_pred             eEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHH
Q 036686           79 TVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAME  158 (508)
Q Consensus        79 ~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~  158 (508)
                      ++++++||+.+++++.++...|.+++.......+ +....+..+..+|+.|+++||.+..++|+..+++.+.+.++++++
T Consensus        78 ~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~-~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~  156 (517)
T PLN02687         78 DVVVAASASVAAQFLRTHDANFSNRPPNSGAEHM-AYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVA  156 (517)
T ss_pred             eEEEeCCHHHHHHHHHhcchhhhcCCCccchhhh-ccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHH
Confidence            9999999999999998877788877654322222 211123444557999999999775579999999999999999999


Q ss_pred             HHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhcccccch----HHHHHHHHHHHHHHHhcCC-CcccccccchhhhH
Q 036686          159 SHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISE----ERIKHIESILKDVMLITSP-QLPDFLPILTPLFR  233 (508)
Q Consensus       159 ~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~  233 (508)
                      .+++.+.... + ++++|+.+++..+++|+++.++||.++..    .....+.+....+...... ....++|++.++..
T Consensus       157 ~l~~~l~~~~-~-~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~  234 (517)
T PLN02687        157 LLVRELARQH-G-TAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL  234 (517)
T ss_pred             HHHHHHHHhc-C-CCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc
Confidence            9999997642 2 56899999999999999999999988631    2234455555554443322 22234554332211


Q ss_pred             -hHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCC-----CCCCCCHHHHHHHHHH
Q 036686          234 -RQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPT-----GREQLGEQEIVTLCSE  307 (508)
Q Consensus       234 -~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-----~~~~l~~~~i~~~~~~  307 (508)
                       ...++..+..+.+.+++.+.++++++...       ..+....   |+++.+++...+     ++..++++++.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-------~~~~~~~---d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~  304 (517)
T PLN02687        235 QGVVGKMKRLHRRFDAMMNGIIEEHKAAGQ-------TGSEEHK---DLLSTLLALKREQQADGEGGRITDTEIKALLLN  304 (517)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------ccCcccc---cHHHHHHHhhccccccccccCCCHHHHHHHHHH
Confidence             12334555667778888888888776431       0011122   889999875432     1236999999999999


Q ss_pred             HHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccc
Q 036686          308 VISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKD  387 (508)
Q Consensus       308 ~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d  387 (508)
                      +++||+|||+++++|++++|++||++|+|+++|++++++.++.++++++++||||+|||+||||++|+++..++|.+.+|
T Consensus       305 ~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d  384 (517)
T PLN02687        305 LFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEE  384 (517)
T ss_pred             HhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCC
Confidence            99999999999999999999999999999999999999877788999999999999999999999999998778999999


Q ss_pred             cccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHH
Q 036686          388 TELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLL  467 (508)
Q Consensus       388 ~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~  467 (508)
                      ++++|+.||+||.|.++.+++||||++|+||++|+||||++++.............|+|||+|+|.|+|++||++|++++
T Consensus       385 ~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~  464 (517)
T PLN02687        385 CEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLL  464 (517)
T ss_pred             eeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence            99999999999999999999999999999999999999997543111101123468999999999999999999999999


Q ss_pred             HHHHHHhceeecCCCCCC-CC--CcccceeeeecCceeEEeecC
Q 036686          468 IARMVHAYKWLPVPGAPP-DP--TETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       468 l~~ll~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +++|+++|++++.++..+ +.  ......+..++.+++++++||
T Consensus       465 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        465 TATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             HHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccC
Confidence            999999999998875432 12  223444555667899998887


No 6  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5e-77  Score=583.69  Aligned_cols=490  Identities=30%  Similarity=0.500  Sum_probs=378.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeC
Q 036686            5 DLVILISGFIFLCLWWRYSSTTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVT   84 (508)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~   84 (508)
                      .+-++++++++.++++.+..++...+.+.||||+++|++||++.+.   .+.+..+.+++++||++|++++++.+.++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~   81 (514)
T PLN03112          5 LLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLG---PLPHRDLASLCKKYGPLVYLRLGSVDAITTD   81 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcC---CchHHHHHHHHHHhCCeEEEEecCccEEEEC
Confidence            3334444444444555555556666778899999999999998763   3466779999999999999999999999999


Q ss_pred             CHHHHHHHHHhcCCCcCCCCCCCCceE-EeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHH
Q 036686           85 SSQLIHEALVQRGPEFASRPPDSPIRL-VFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKR  163 (508)
Q Consensus        85 ~p~~~~~il~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~  163 (508)
                      ||+.+++++.++...|.+++....... .++.+  .+.+..+|+.|+.+||.+..++|+..+++.+.+.+.++++.+++.
T Consensus        82 dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~--~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~  159 (514)
T PLN03112         82 DPELIREILLRQDDVFASRPRTLAAVHLAYGCG--DVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQD  159 (514)
T ss_pred             CHHHHHHHHHhCCcccccCCCcccceeeccCCC--ceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHH
Confidence            999999999888778887665322221 22222  333445799999999987778999999999999999999999998


Q ss_pred             HHHhhccCCccchhhHHHHHHHHhhhhhhhcccccch------HHHHHHHHHHHHHHHhcCC-CcccccccchhhhH-hH
Q 036686          164 LNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISE------ERIKHIESILKDVMLITSP-QLPDFLPILTPLFR-RQ  235 (508)
Q Consensus       164 l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~-~~  235 (508)
                      +.+.... ++.+|+.+.+..+++++++.++||.++..      .....+......+...... .+..++|++.++.. ..
T Consensus       160 l~~~~~~-~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  238 (514)
T PLN03112        160 VWEAAQT-GKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGC  238 (514)
T ss_pred             HHHhhcc-CCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccH
Confidence            7654332 56899999999999999999999998621      2223444444444433222 23344554433211 22


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCC-CCCCHHHHHHHHHHHHHcCch
Q 036686          236 MREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGR-EQLGEQEIVTLCSEVISAGTD  314 (508)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~l~~~~i~~~~~~~~~AG~~  314 (508)
                      .++..+..+.+.+++...++++++..+...     ......   ++++.++++..++. +.++++++.+++..+++||+|
T Consensus       239 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~---d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~d  310 (514)
T PLN03112        239 EKKMREVEKRVDEFHDKIIDEHRRARSGKL-----PGGKDM---DFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATD  310 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----cCCccc---hHHHHHHHhhccccccCCCHHHHHHHHHHHhccccc
Confidence            345566777788888888887766432100     011122   89999987543322 258999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCee
Q 036686          315 TSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYS  394 (508)
Q Consensus       315 tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~  394 (508)
                      ||+++++|++++|++||++|+++++||++++++++.++++++++|||++|||+||+|++|+++..++|.+.+|+.++|+.
T Consensus       311 TTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~  390 (514)
T PLN03112        311 TSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYY  390 (514)
T ss_pred             cHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEE
Confidence            99999999999999999999999999999998877899999999999999999999999999987789999999999999


Q ss_pred             eCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHh
Q 036686          395 IPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHA  474 (508)
Q Consensus       395 ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~  474 (508)
                      |||||.|+++.+++||||++|+||++||||||+.+.++...........|+|||+|+|+|+|++||++|+++++++|+++
T Consensus       391 IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~  470 (514)
T PLN03112        391 IPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHC  470 (514)
T ss_pred             eCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999998764321111111234689999999999999999999999999999999


Q ss_pred             ceeecCCCCC---CCCCcccceeeeecCceeEEeecC
Q 036686          475 YKWLPVPGAP---PDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       475 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |++++.++..   ......+++++.+++++.++++||
T Consensus       471 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  507 (514)
T PLN03112        471 FDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPR  507 (514)
T ss_pred             eeeecCCCCCcccCCCccccCcccccCCCeEEEeecC
Confidence            9999875431   222223456666788999999998


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=4.1e-77  Score=579.12  Aligned_cols=473  Identities=25%  Similarity=0.491  Sum_probs=368.9

Q ss_pred             HHHHHhcCCCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCC
Q 036686           19 WWRYSSTTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGP   98 (508)
Q Consensus        19 ~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~   98 (508)
                      .+..++...+.+.+.||||+++|++|+++.+.   ...+..+.+++++||+|+++++|+.++++|+||+.+++++.++..
T Consensus        18 ~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~   94 (504)
T PLN00110         18 RFFIRSLLPKPSRKLPPGPRGWPLLGALPLLG---NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDI   94 (504)
T ss_pred             HHHHHHHhhcccCCCcccCCCCCeeechhhcC---CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcch
Confidence            33333334445667899999999999986653   346678999999999999999999999999999999999988877


Q ss_pred             CcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhh
Q 036686           99 EFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVM  178 (508)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~  178 (508)
                      .|..++.......... +.....+..+|+.|+++|+.+..+.|++..++.+.+.+.+++..+++.+...... ++++|+.
T Consensus        95 ~f~~r~~~~~~~~~~~-~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~-g~~~~~~  172 (504)
T PLN00110         95 NFSNRPPNAGATHLAY-GAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQR-GEPVVVP  172 (504)
T ss_pred             hhcCCCCccchhhhcc-CCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccC-CCcEeHH
Confidence            8887765432221111 2223344457999999999876568999999999999989999999988764333 6689999


Q ss_pred             HHHHHHHHhhhhhhhccccc-c--hHHHHHHHHHHHHHHHhcCC-CcccccccchhhhH-hHHHHHHHHHHHHHHHhHHH
Q 036686          179 SSCRLTICSILICLCFGAKI-S--EERIKHIESILKDVMLITSP-QLPDFLPILTPLFR-RQMREAKELRKRQMECLVPL  253 (508)
Q Consensus       179 ~~~~~~~~~~~~~~~fg~~~-~--~~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~  253 (508)
                      +++..+++|+++.++||.++ +  ......+............. .+..++|++.++.. ...++..+..+.+.+++.+.
T Consensus       173 ~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~  252 (504)
T PLN00110        173 EMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRM  252 (504)
T ss_pred             HHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999876 2  12223455555444433222 22344554432211 12244455566777777777


Q ss_pred             HHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCC-CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChH
Q 036686          254 IRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTG-REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQE  332 (508)
Q Consensus       254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~  332 (508)
                      ++++++...        .+....   ++++.+++....+ +..++++++.++++++++||+|||+++++|++++|++||+
T Consensus       253 i~~~~~~~~--------~~~~~~---d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~  321 (504)
T PLN00110        253 IEEHTASAH--------ERKGNP---DFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPS  321 (504)
T ss_pred             HHHHHhhcc--------ccccCC---ChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHH
Confidence            777665321        111122   7899988754322 2369999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCC
Q 036686          333 IQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDP  412 (508)
Q Consensus       333 ~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~  412 (508)
                      +|+|+++|+++++++++.++++++++||||+|||+||||++|++++.++|.+.+|++++||.|||||.|+++.+++|+||
T Consensus       322 ~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~  401 (504)
T PLN00110        322 ILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDP  401 (504)
T ss_pred             HHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCCh
Confidence            99999999999998877789999999999999999999999999987789999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccc
Q 036686          413 DMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYA  492 (508)
Q Consensus       413 ~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  492 (508)
                      ++|+||++|+||||++++....+ .......|+|||+|+|.|+|++||++|+++++++|+++|++++.++.+.+.....+
T Consensus       402 ~~~~dP~~F~PeRfl~~~~~~~~-~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  480 (504)
T PLN00110        402 DVWENPEEFRPERFLSEKNAKID-PRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFG  480 (504)
T ss_pred             hhcCCcccCCcccccCCCCcccc-cCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccc
Confidence            99999999999999975432111 00123579999999999999999999999999999999999988765433333456


Q ss_pred             eeeeecCceeEEeecC
Q 036686          493 FTVVMKNSLKAVILPR  508 (508)
Q Consensus       493 ~~~~~~~~~~v~~~~r  508 (508)
                      .++.++.+++|++++|
T Consensus       481 ~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        481 LALQKAVPLSAMVTPR  496 (504)
T ss_pred             cccccCCCceEeeccC
Confidence            7888889999999987


No 8  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=6.5e-77  Score=581.88  Aligned_cols=468  Identities=28%  Similarity=0.518  Sum_probs=355.4

Q ss_pred             CCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCC
Q 036686           27 GGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPD  106 (508)
Q Consensus        27 ~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~  106 (508)
                      ..++.+.||||+++|++|++..+...  ..+..+.+|+++||+||++++|++++++|+||+.+++++.+++..|.+++..
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~~--~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGDD--LNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCCC--chhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            34567889999999999998776432  2456799999999999999999999999999999999998877778766543


Q ss_pred             CCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHH
Q 036686          107 SPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTIC  186 (508)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~  186 (508)
                      ..+..+.+.+. +..+..+|+.|+++||.+..++|++..++.+.+.++++++.+++.+.+.....++.+|+...+..+++
T Consensus       103 ~~~~~~~g~~~-~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~  181 (503)
T PLN02394        103 VVFDIFTGKGQ-DMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMY  181 (503)
T ss_pred             chHhHhccCCC-ceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHH
Confidence            33333333332 33344579999999997766899999999999999999999999997643322446899999999999


Q ss_pred             hhhhhhhcccccchHH---HHHHHHHHHHHHHhcC---CCcccccccchhhhHhHHHHHHHHHHHHHHHh-HHHHHHHHH
Q 036686          187 SILICLCFGAKISEER---IKHIESILKDVMLITS---PQLPDFLPILTPLFRRQMREAKELRKRQMECL-VPLIRNRKA  259 (508)
Q Consensus       187 ~~~~~~~fg~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~  259 (508)
                      |+++.++||.+++...   ...+............   ..+..++|++.+......+............+ ...++++++
T Consensus       182 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        182 NIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999885322   1122222222111111   11223345443322222222222222222223 335555554


Q ss_pred             HHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHH
Q 036686          260 FVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK  339 (508)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~  339 (508)
                      ..+..+    .+.....   ++++.+++...+  +.++++++..++.++++||+|||+++++|++++|++||++|+|+|+
T Consensus       262 ~~~~~~----~~~~~~~---d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~  332 (503)
T PLN02394        262 LMSAKG----MDKEGLK---CAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRD  332 (503)
T ss_pred             Hhhhcc----CCcchhh---hHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            321110    0111122   889999976532  3589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCC
Q 036686          340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPG  419 (508)
Q Consensus       340 Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  419 (508)
                      ||+++++.++.++++++++||||+|||+|+||++|++++..+|.+.+|++++||.||+||.|.++.+++||||++|+||+
T Consensus       333 Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~  412 (503)
T PLN02394        333 ELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPE  412 (503)
T ss_pred             HHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCcc
Confidence            99999987777899999999999999999999999999987899999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCC-CCCCcccc-eeeee
Q 036686          420 EFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAP-PDPTETYA-FTVVM  497 (508)
Q Consensus       420 ~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~-~~~~~~~~-~~~~~  497 (508)
                      +|+||||++++.+...  ......|+|||+|+|+|+|++||++|+++++++|+++|++++.++.+ .+....++ +....
T Consensus       413 ~F~PeRwl~~~~~~~~--~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  490 (503)
T PLN02394        413 EFRPERFLEEEAKVEA--NGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHI  490 (503)
T ss_pred             ccCccccCCCCCcccc--cCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeecc
Confidence            9999999976431110  11346799999999999999999999999999999999999887663 33344453 56657


Q ss_pred             cCceeEEeecC
Q 036686          498 KNSLKAVILPR  508 (508)
Q Consensus       498 ~~~~~v~~~~r  508 (508)
                      +.+++|+++||
T Consensus       491 ~~~~~~~~~~r  501 (503)
T PLN02394        491 AKHSTVVFKPR  501 (503)
T ss_pred             CCCceEEeecC
Confidence            88999999998


No 9  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=4.8e-77  Score=582.25  Aligned_cols=463  Identities=26%  Similarity=0.449  Sum_probs=364.4

Q ss_pred             CCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC
Q 036686           29 GPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP  108 (508)
Q Consensus        29 ~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~  108 (508)
                      .+.+.||||.++|++||++.+..  .+.+.++.+++++||++|++++|+.++++++||+.+++++.+++..|..++....
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEK--FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCC--CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            35577999999999999987642  1344568999999999999999999999999999999999888778887765432


Q ss_pred             ceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhh
Q 036686          109 IRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      .......+. .+.....++.|+++||.+..++|++.+++.+.+.+.++++++++++...... ++.+|+.+.+..+++|+
T Consensus       103 ~~~~~~~~~-~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~-~~~vd~~~~~~~~t~dv  180 (499)
T PLN03234        103 QQTMSYQGR-ELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQ-SGTVDLSELLLSFTNCV  180 (499)
T ss_pred             hhhhccCCC-ccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccC-CCeEEHHHHHHHHHHHH
Confidence            211111111 2223346789999999766789999999999999999999999999765443 66899999999999999


Q ss_pred             hhhhhcccccchH--HHHHHHHHHHHHHHhcCC-Ccccccccchhh--hHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          189 LICLCFGAKISEE--RIKHIESILKDVMLITSP-QLPDFLPILTPL--FRRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       189 ~~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      ++.++||.+++..  ....+.+...+....... .+...+|++...  +.+..++..++.+.+.+++.+.++++++... 
T Consensus       181 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  259 (499)
T PLN03234        181 VCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR-  259 (499)
T ss_pred             HHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence            9999999988542  223344433333322221 233344543321  1223456677888888999999888665321 


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCCC--CCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGR--EQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEI  341 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~--~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei  341 (508)
                             .+....   ++++.+++...++.  ..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|+
T Consensus       260 -------~~~~~~---d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei  329 (499)
T PLN03234        260 -------PKQETE---SFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEV  329 (499)
T ss_pred             -------cCCCcc---cHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence                   011112   77787776433221  258999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCC-CCCCC
Q 036686          342 VAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW-SDPGE  420 (508)
Q Consensus       342 ~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~  420 (508)
                      ++++++++.++++++.+|||++|||+|+||++|++++.++|.+.+|++++||.|||||.|+++.+++||||++| +||++
T Consensus       330 ~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~  409 (499)
T PLN03234        330 RNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNE  409 (499)
T ss_pred             HHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhh
Confidence            99998877789999999999999999999999999987689999999999999999999999999999999999 89999


Q ss_pred             CCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCC-CCCCC--cccceeeee
Q 036686          421 FRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGA-PPDPT--ETYAFTVVM  497 (508)
Q Consensus       421 F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~-~~~~~--~~~~~~~~~  497 (508)
                      ||||||+++..+..  .......|+|||+|+|+|+|+++|++|+++++++|+++|++++.++. +.+..  ..++.+..+
T Consensus       410 F~PeR~l~~~~~~~--~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  487 (499)
T PLN03234        410 FIPERFMKEHKGVD--FKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHK  487 (499)
T ss_pred             cCchhhcCCCCCcC--cCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccccc
Confidence            99999997643110  11235689999999999999999999999999999999999988753 22222  356667778


Q ss_pred             cCceeEEeecC
Q 036686          498 KNSLKAVILPR  508 (508)
Q Consensus       498 ~~~~~v~~~~r  508 (508)
                      ++.+++..++|
T Consensus       488 ~~~~~~~~~~~  498 (499)
T PLN03234        488 KEHLVLAPTKH  498 (499)
T ss_pred             CCCeEEEeecC
Confidence            88898888876


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=8.8e-77  Score=577.80  Aligned_cols=453  Identities=24%  Similarity=0.305  Sum_probs=352.3

Q ss_pred             cCCCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCC
Q 036686           25 TTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRP  104 (508)
Q Consensus        25 ~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~  104 (508)
                      +..+...+.+|||+++|++|+++.+..   +.+..+.+++++||++|++++|+.+.++++||+.+++++.++...|..++
T Consensus        22 ~~~~~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~   98 (482)
T PTZ00404         22 KYKKIHKNELKGPIPIPILGNLHQLGN---LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRP   98 (482)
T ss_pred             HhhhccCCCCCCCCCCCeeccHhhhcc---cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCC
Confidence            333455677999999999999887643   56778999999999999999999999999999999999987766777665


Q ss_pred             CCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHH
Q 036686          105 PDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLT  184 (508)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~  184 (508)
                      ........ . .+.++.. .+|+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+.+.... ++.+|+..++..+
T Consensus        99 ~~~~~~~~-~-~~~~l~~-~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~-~~~vd~~~~~~~~  173 (482)
T PTZ00404         99 KIPSIKHG-T-FYHGIVT-SSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESS-GETFEPRYYLTKF  173 (482)
T ss_pred             Ccceeeee-c-cCCceec-cChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhc-CCccCHHHHHHHH
Confidence            44332211 1 1224444 3799999999855 789999999999999999999999999764333 5679999999999


Q ss_pred             HHhhhhhhhcccccchH------HHHHHHHHHHHHHHhcCC-CcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHH
Q 036686          185 ICSILICLCFGAKISEE------RIKHIESILKDVMLITSP-QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNR  257 (508)
Q Consensus       185 ~~~~~~~~~fg~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  257 (508)
                      ++|+++.++||.+++..      ....+.+....++..... .+..+++++.+.+........+..+.+.+++.+.++++
T Consensus       174 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  253 (482)
T PTZ00404        174 TMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEH  253 (482)
T ss_pred             HHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987431      113344444444433322 22223333332222222233344555666666665554


Q ss_pred             HHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHH
Q 036686          258 KAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKL  337 (508)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~l  337 (508)
                      ++..   +      .....   ++++.+++...+. .....+++++++..+++||+|||+++++|++++|++||++|+|+
T Consensus       254 ~~~~---~------~~~~~---dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl  320 (482)
T PTZ00404        254 LKTI---D------PEVPR---DLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKA  320 (482)
T ss_pred             HHcc---C------CCCcc---cHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHH
Confidence            4321   0      01112   7899998753211 11223458899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc-CCeeeCCCCEEEEcccccccCCCCCC
Q 036686          338 YKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL-GGYSIPAGVHVEFYTAWLTEDPDMWS  416 (508)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~  416 (508)
                      ++|+++++++++.++++++++||||+|||+|||||+|+++..++|.+.+|+++ +||.|||||.|+++.+++||||++|+
T Consensus       321 ~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~  400 (482)
T PTZ00404        321 YNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFE  400 (482)
T ss_pred             HHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccC
Confidence            99999999877778999999999999999999999999997678999999999 99999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeee
Q 036686          417 DPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVV  496 (508)
Q Consensus       417 ~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  496 (508)
                      ||++|+||||+++.         .+..|+|||+|+|+|+|++||++|+++++++++++|+++..++.+++.....+.++.
T Consensus       401 dP~~F~PeRwl~~~---------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  471 (482)
T PTZ00404        401 NPEQFDPSRFLNPD---------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK  471 (482)
T ss_pred             CccccCccccCCCC---------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec
Confidence            99999999998752         246899999999999999999999999999999999999876654333334566676


Q ss_pred             ecCceeEEeecC
Q 036686          497 MKNSLKAVILPR  508 (508)
Q Consensus       497 ~~~~~~v~~~~r  508 (508)
                       +.+++|++++|
T Consensus       472 -~~~~~v~~~~R  482 (482)
T PTZ00404        472 -PNKFKVLLEKR  482 (482)
T ss_pred             -CCCceeeeecC
Confidence             67899999998


No 11 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.9e-76  Score=578.04  Aligned_cols=462  Identities=28%  Similarity=0.467  Sum_probs=355.9

Q ss_pred             CCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI  109 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~  109 (508)
                      +.+.||||+++|++|+++.+..   ..+..+.+++++||++|++++|+.++++|+||+.+++++.++...|..++.....
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~  110 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMMDQ---LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI  110 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhcCC---cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence            3467999999999999876522   2455689999999999999999999999999999999998887778777643322


Q ss_pred             eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhh
Q 036686          110 RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSIL  189 (508)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~  189 (508)
                      ....+.+. ...+..+|+.|+++|+.+..++|+...++.+.+.. +++..+++.+...  . ++++|+.+++..++++++
T Consensus       111 ~~~~~~~~-~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~--~-~~~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        111 SYLTYDRA-DMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN--I-GKPVNIGELIFTLTRNIT  185 (516)
T ss_pred             hccccCCC-ceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc--C-CCcEeHHHHHHHHHHHHH
Confidence            22222222 33444579999999997667899999998888764 5788899888642  2 668999999999999999


Q ss_pred             hhhhcccccchHHHHHHHHHHHHHHHhcCC-Ccccccccchhhh-HhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCC
Q 036686          190 ICLCFGAKISEERIKHIESILKDVMLITSP-QLPDFLPILTPLF-RRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP  267 (508)
Q Consensus       190 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (508)
                      +.++||.+.+... ..+.+....+...... ....++|++..+. ....++..+..+.+.+++.+.++++.+...+.+..
T Consensus       186 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  264 (516)
T PLN02183        186 YRAAFGSSSNEGQ-DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNAD  264 (516)
T ss_pred             HhHhhcCcccchH-HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            9999999875432 3444444444332222 2334556544321 12244566677788888888888776644211100


Q ss_pred             CCCCccccccchhhHHhhhcCCCCC-----------CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHH
Q 036686          268 NSESEMVSPIGAAYVDSLFGLEPTG-----------REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEK  336 (508)
Q Consensus       268 ~~~~~~~~~~~~~~~~~ll~~~~~~-----------~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~  336 (508)
                      . ..+....   ++++.+++...++           ...++++++++++.++++||+|||+++++|++++|++||++|+|
T Consensus       265 ~-~~~~~~~---d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~k  340 (516)
T PLN02183        265 N-DSEEAET---DMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKR  340 (516)
T ss_pred             c-ccccccc---cHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHH
Confidence            0 0011122   7888888643211           12589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCC
Q 036686          337 LYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWS  416 (508)
Q Consensus       337 lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  416 (508)
                      +++|++++++.++.++++++++||||+|||+|||||+|++++. .|.+.+|++++||.|||||.|.++.+++||||++|+
T Consensus       341 l~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~  419 (516)
T PLN02183        341 VQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWE  419 (516)
T ss_pred             HHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccC
Confidence            9999999998767789999999999999999999999999986 588999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCC-CC--cccce
Q 036686          417 DPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD-PT--ETYAF  493 (508)
Q Consensus       417 ~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~-~~--~~~~~  493 (508)
                      ||++|+||||++++..+.   ..+...|+|||+|+|+|+|++||++|+++++|+|+++|++++.++..++ ..  ..++.
T Consensus       420 dP~~F~PeRfl~~~~~~~---~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  496 (516)
T PLN02183        420 DPDTFKPSRFLKPGVPDF---KGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGL  496 (516)
T ss_pred             CccccCchhhCCCCCccc---cCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccc
Confidence            999999999997543211   1134689999999999999999999999999999999999987764322 22  23344


Q ss_pred             eeeecCceeEEeecC
Q 036686          494 TVVMKNSLKAVILPR  508 (508)
Q Consensus       494 ~~~~~~~~~v~~~~r  508 (508)
                      +..++.++.+.+++|
T Consensus       497 ~~~~~~~~~~~~~~r  511 (516)
T PLN02183        497 TAPRATRLVAVPTYR  511 (516)
T ss_pred             ccccCCCcEEEeecC
Confidence            444556788888877


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=5.2e-75  Score=566.62  Aligned_cols=459  Identities=28%  Similarity=0.463  Sum_probs=349.2

Q ss_pred             CCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC
Q 036686           29 GPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP  108 (508)
Q Consensus        29 ~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~  108 (508)
                      .+.+.||||+++|++||++.+.  ..+.+..+.+|+++||++|++++|+.++++++||+.+++++.+++..|.+++....
T Consensus        26 ~~~~~ppgp~~~p~~G~l~~l~--~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         26 KRYKLPPGPSPLPVIGNLLQLQ--KLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             CCCCCCcCCCCCCeeccHHhcC--CCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            3556799999999999998763  23466779999999999999999999999999999999999887777776654332


Q ss_pred             ceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhh
Q 036686          109 IRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      .. ....+...+.+..+|+.|+.+|+.+..++|++.+++.+.+.+.+.+..+++.+.+.... ++.+|+.+++..+++|+
T Consensus       104 ~~-~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~-~~~vdl~~~~~~~t~dv  181 (502)
T PLN02966        104 HE-FISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADK-SEVVDISELMLTFTNSV  181 (502)
T ss_pred             ce-eeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceeHHHHHHHHHHHH
Confidence            22 22223223334446999999999867899999999999999999999999999765433 56799999999999999


Q ss_pred             hhhhhcccccchH--HHHHHHHHHHHHHHhcCC-Ccccccccchhh--hHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          189 LICLCFGAKISEE--RIKHIESILKDVMLITSP-QLPDFLPILTPL--FRRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       189 ~~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      ++.++||.+++..  ....+.+........... .+..++|++..+  +....+......+...+++.+.+++...... 
T Consensus       182 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  260 (502)
T PLN02966        182 VCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR-  260 (502)
T ss_pred             HHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence            9999999987532  222333333333322222 233344533211  1111122233455566666666665443210 


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCC--CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTG--REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEI  341 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei  341 (508)
                            . .....   ++++.+++...++  ...++++++.++++++++||+|||+++++|++++|++||++|+|+++||
T Consensus       261 ------~-~~~~~---~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei  330 (502)
T PLN02966        261 ------V-KPETE---SMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEV  330 (502)
T ss_pred             ------c-ccccc---cHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence                  0 01112   7888887644322  2358999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCC--CCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCC-CCC
Q 036686          342 VAAVGKD--GLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW-SDP  418 (508)
Q Consensus       342 ~~~~~~~--~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p  418 (508)
                      +++++++  +.++++++++||||+|||+|+||++|++++.++|.+.+|++++||.|||||.|+++.+++||||++| |||
T Consensus       331 ~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP  410 (502)
T PLN02966        331 REYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNP  410 (502)
T ss_pred             HHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCCh
Confidence            9998753  3578999999999999999999999999987789999999999999999999999999999999999 999


Q ss_pred             CCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCC-C--Ccccceee
Q 036686          419 GEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD-P--TETYAFTV  495 (508)
Q Consensus       419 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~-~--~~~~~~~~  495 (508)
                      ++|+||||++++.+.    ......|+|||+|+|+|+|++||++|+++++++|+++|+|++.++...+ .  ....+++.
T Consensus       411 ~~F~PeRwl~~~~~~----~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~  486 (502)
T PLN02966        411 DEFRPERFLEKEVDF----KGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAM  486 (502)
T ss_pred             hhCChhhhcCCCCCc----CCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeee
Confidence            999999999754310    1135689999999999999999999999999999999999988765322 1  22345555


Q ss_pred             eecCceeEEee
Q 036686          496 VMKNSLKAVIL  506 (508)
Q Consensus       496 ~~~~~~~v~~~  506 (508)
                      .++..+++..+
T Consensus       487 ~~~~~~~~~~~  497 (502)
T PLN02966        487 HKSQHLKLVPE  497 (502)
T ss_pred             ccCCCeEEEEE
Confidence            44445554443


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=6.3e-76  Score=565.37  Aligned_cols=454  Identities=28%  Similarity=0.463  Sum_probs=355.9

Q ss_pred             CCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC-C
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS-P  108 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~-~  108 (508)
                      ....||||.++|++|++..+.....+...+..++..+||++|+.|+||.+.++++||+.+++|+.++...+.+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            456799999999999999986433667788999999999999999999999999999999999965555555544443 3


Q ss_pred             ceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhh
Q 036686          109 IRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      +...+|.   ++.+. +|+.|+.+|| +..+.|+...++.+...+.+....+...+.....  ++.+|+.+.++++++|+
T Consensus       113 ~~~~lG~---gll~~-~g~~W~~~Rk-~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~tld~  185 (497)
T KOG0157|consen  113 LKPWLGD---GLLFS-DGEKWHKHRK-LLTPAFHFEILKSFVPVFIESSLILLLLLELAAS--GEEVDLQDLLKRLTLDI  185 (497)
T ss_pred             HHHHhcC---ccccC-CchHHHHHHh-hccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEcHHHHHHHHHHHH
Confidence            3334443   44454 4999999887 5588999999999999999888888887776432  23399999999999999


Q ss_pred             hhhhhccccc---chHHHHHHHHHHHHHHHhcCCCcccccc-cchhhhH-hHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          189 LICLCFGAKI---SEERIKHIESILKDVMLITSPQLPDFLP-ILTPLFR-RQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       189 ~~~~~fg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      ++.++||...   .......+.+.+..+......  +...| +...... ...++..++.+.+.+++.+.|+++++...+
T Consensus       186 i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~  263 (497)
T KOG0157|consen  186 ICKTAMGPESLDAEGPELFEYVQAFDDLTELISK--RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEK  263 (497)
T ss_pred             HHHHhcCCccccccCCcccHHHHHHHHHHHHHHH--HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999322   111222333333333222221  11233 2221111 146778888999999999999999987643


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVA  343 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~  343 (508)
                      .+..    +..+.  .++++.+.....   ..++++++++++.+|++||+||||++++|++++|+.||++|+++++|+++
T Consensus       264 ~~~~----~~~~~--~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~  334 (497)
T KOG0157|consen  264 EGSG----EEKKR--LDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDE  334 (497)
T ss_pred             cCCc----ccchh--hhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            2211    01111  177775333221   47999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCC-CCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc-CCeeeCCCCEEEEcccccccCCCCCC-CCCC
Q 036686          344 AVGKDGL-VKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL-GGYSIPAGVHVEFYTAWLTEDPDMWS-DPGE  420 (508)
Q Consensus       344 ~~~~~~~-~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~  420 (508)
                      +++++.. .+....++|+||++||+|||||+||+|. +.|.+.+|+++ +||.||||+.|.++.+++|||+.+|+ ||++
T Consensus       335 i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~  413 (497)
T KOG0157|consen  335 ILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEE  413 (497)
T ss_pred             HhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhh
Confidence            9985443 2323333699999999999999999998 57999999999 58999999999999999999999995 9999


Q ss_pred             CCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCc
Q 036686          421 FRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNS  500 (508)
Q Consensus       421 F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (508)
                      ||||||+++....    ..++.+|+|||+|||+|+|++||++|||+++++|+++|+++++.+..  .......++++++|
T Consensus       414 F~PeRf~~~~~~~----~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~g  487 (497)
T KOG0157|consen  414 FDPERFLDGEEKA----KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNG  487 (497)
T ss_pred             cCccccCCCCCcC----CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCC
Confidence            9999999764321    23578999999999999999999999999999999999999887654  45577889999999


Q ss_pred             eeEEeecC
Q 036686          501 LKAVILPR  508 (508)
Q Consensus       501 ~~v~~~~r  508 (508)
                      ++|+++||
T Consensus       488 l~v~~~~r  495 (497)
T KOG0157|consen  488 LKVKLRPR  495 (497)
T ss_pred             eEEEEEeC
Confidence            99999997


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.1e-74  Score=567.51  Aligned_cols=452  Identities=21%  Similarity=0.307  Sum_probs=347.8

Q ss_pred             CCCCCCCCCCCccccchhhhhhh----------------cCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHH
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQ----------------RRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEAL   93 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~----------------~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il   93 (508)
                      ....||||+++|++||++.+...                ..+....+.+|+++||++|++++|+.++++++||+.+++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            33459999999999998876431                12233346889999999999999999999999999999999


Q ss_pred             HhcCCCcCCCCCCCC--ceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccC
Q 036686           94 VQRGPEFASRPPDSP--IRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDN  171 (508)
Q Consensus        94 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~  171 (508)
                      .++ ..+..++....  ....+  | .++.+. +|+.|+++||.+ .+.|+..+++.+.+.+.++++.+++.+....+.+
T Consensus       120 ~~~-~~~~~r~~~~~~~~~~~~--g-~~l~~~-~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~  193 (516)
T PLN02290        120 TKY-NTVTGKSWLQQQGTKHFI--G-RGLLMA-NGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESG  193 (516)
T ss_pred             hcC-CCCCCCcchhhhHHHHHh--c-CCcccc-CchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            776 34444432111  11112  2 244443 799999999865 6899999999999999999999999997654332


Q ss_pred             CccchhhHHHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCC-CcccccccchhhhHhHHHHHHHHHHHHHHHh
Q 036686          172 DLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLITSP-QLPDFLPILTPLFRRQMREAKELRKRQMECL  250 (508)
Q Consensus       172 ~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  250 (508)
                      +..+|+.+++..+++|+++.++||.+++..  +........+...... .....+|++..+.....+......+.+.+++
T Consensus       194 ~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~  271 (516)
T PLN02290        194 QTEVEIGEYMTRLTADIISRTEFDSSYEKG--KQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLL  271 (516)
T ss_pred             CceEEhHHHHHHHHHHHHHHHHcCCccccc--hHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHH
Confidence            457999999999999999999999987432  1111222221111100 1111233322222222344556677888888


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCC---CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHH
Q 036686          251 VPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPT---GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHL  327 (508)
Q Consensus       251 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~---~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L  327 (508)
                      .+.++++++..+.+.     .+....   |+++.+++....   +...++++++.+++.++++||+|||+++++|++++|
T Consensus       272 ~~~i~~~~~~~~~~~-----~~~~~~---d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L  343 (516)
T PLN02290        272 MEIIQSRRDCVEIGR-----SSSYGD---DLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLL  343 (516)
T ss_pred             HHHHHHHHHHhhccc-----CCCCCC---CHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            888888776542111     011112   788888864322   112488999999999999999999999999999999


Q ss_pred             hhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccc
Q 036686          328 VLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAW  407 (508)
Q Consensus       328 ~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~  407 (508)
                      ++||++|+|+|+|++++++++ .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.|||||.|+++.++
T Consensus       344 ~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~  421 (516)
T PLN02290        344 ASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLA  421 (516)
T ss_pred             hcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHH
Confidence            999999999999999999875 78999999999999999999999999986 6899999999999999999999999999


Q ss_pred             cccCCCCC-CCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCC
Q 036686          408 LTEDPDMW-SDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPD  486 (508)
Q Consensus       408 ~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~  486 (508)
                      +||||++| +||++|+||||++.+.       .....|+|||.|+|.|+|++||++|+++++++|+++|++++.++..  
T Consensus       422 ~~rdp~~~~~dP~~F~PeRfl~~~~-------~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~--  492 (516)
T PLN02290        422 IHHSEELWGKDANEFNPDRFAGRPF-------APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR--  492 (516)
T ss_pred             hcCChhhhCCChhhcCccccCCCCC-------CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc--
Confidence            99999999 8999999999995421       1245799999999999999999999999999999999999877532  


Q ss_pred             CCcccceeeeecCceeEEeecC
Q 036686          487 PTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       487 ~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      ......+++.|+++++|++++|
T Consensus       493 ~~~~~~~~~~p~~~~~~~~~~~  514 (516)
T PLN02290        493 HAPVVVLTIKPKYGVQVCLKPL  514 (516)
T ss_pred             cCccceeeecCCCCCeEEEEeC
Confidence            1223357888999999999987


No 15 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.9e-74  Score=561.54  Aligned_cols=445  Identities=19%  Similarity=0.279  Sum_probs=339.8

Q ss_pred             CCCCCCCCCCCCCccccchhhhhhh--cCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCC
Q 036686           28 GGPKNLPPGPRGWPLVGNLVQVILQ--RRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPP  105 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~  105 (508)
                      +.+.+.||||+++|++||++.+...  ...++..+.+++++||++|++++|+.++++|+||+.++++|.+++..|..+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            4455789999999999998765432  24577778999999999999999999999999999999999887766654322


Q ss_pred             CCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhh-hhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHH
Q 036686          106 DSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQ-CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLT  184 (508)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~  184 (508)
                      .. ....++  ..++.+. +|+.|+.+|+.+ .+.|++..++. +.+.+.+.+..+++.+..     +..+|+.+.+..+
T Consensus       114 ~~-~~~~~g--~~~~~~~-~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~vd~~~~~~~~  183 (490)
T PLN02500        114 RS-IGGILG--KWSMLVL-VGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE-----NSTFSAQDEAKKF  183 (490)
T ss_pred             hH-HHHHhC--ccccccc-CCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC-----CCCEEehHHHHHH
Confidence            11 111122  1233343 799999999966 58899888876 455666666666666642     4568999999999


Q ss_pred             HHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhC
Q 036686          185 ICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG  264 (508)
Q Consensus       185 ~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (508)
                      +++++++++||.+.+......+...+..+...... ....+|..      ..++..++.+.+.+++.+.++++++...++
T Consensus       184 ~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  256 (490)
T PLN02500        184 TFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS-APLNFPGT------AYRKALKSRATILKFIERKMEERIEKLKEE  256 (490)
T ss_pred             HHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc-chhcCCCc------ccHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            99999999999987544333433333333322111 11112321      123445567788888888888877644211


Q ss_pred             CCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 036686          265 QNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAA  344 (508)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~  344 (508)
                      +     ......   |+++.+++.     ..++++++++++.++++||+|||+++++|++++|++||++|+|+|+|++++
T Consensus       257 ~-----~~~~~~---d~l~~ll~~-----~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v  323 (490)
T PLN02500        257 D-----ESVEED---DLLGWVLKH-----SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEI  323 (490)
T ss_pred             c-----CCCCcc---hHHHHHHhc-----cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence            1     001122   899998863     258999999999999999999999999999999999999999999999998


Q ss_pred             hc-----CCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCC
Q 036686          345 VG-----KDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPG  419 (508)
Q Consensus       345 ~~-----~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  419 (508)
                      ++     .++.++++++++|||++|||+||||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||+
T Consensus       324 ~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~  402 (490)
T PLN02500        324 ARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQ  402 (490)
T ss_pred             hhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCcc
Confidence            74     23458999999999999999999999999998 5799999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCCcc--ccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeee
Q 036686          420 EFRPERFLEGDGVDVD--VTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVM  497 (508)
Q Consensus       420 ~F~p~R~l~~~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  497 (508)
                      +|+||||++++.+...  ....++..|+|||+|+|.|+|++||++|+++++++|+++|++++.++... .  ... ...+
T Consensus       403 ~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~--~~~-~~~~  478 (490)
T PLN02500        403 LFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-F--AFP-FVDF  478 (490)
T ss_pred             ccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-e--ecc-cccC
Confidence            9999999975431110  00124568999999999999999999999999999999999998775431 1  122 3355


Q ss_pred             cCceeEEeec
Q 036686          498 KNSLKAVILP  507 (508)
Q Consensus       498 ~~~~~v~~~~  507 (508)
                      +++++|++++
T Consensus       479 ~~~l~~~~~~  488 (490)
T PLN02500        479 PKGLPIRVRR  488 (490)
T ss_pred             CCCceEEEEe
Confidence            6899999875


No 16 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.6e-74  Score=556.40  Aligned_cols=450  Identities=26%  Similarity=0.454  Sum_probs=356.5

Q ss_pred             CCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEe
Q 036686           34 PPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVF  113 (508)
Q Consensus        34 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  113 (508)
                      ||||+++|++||++++..  .+++..+.+|+++||++|++++|+.++++|+||+.+++++.++...|..++.......+.
T Consensus         1 ppgp~~lP~iG~l~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~   78 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE--KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLT   78 (466)
T ss_pred             CcCCCCCCccccHHHcCC--CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHh
Confidence            789999999999988753  346778999999999999999999999999999999999998888887765433322222


Q ss_pred             ecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhcc-CCccchhhHHHHHHHHhhhhhh
Q 036686          114 SVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFD-NDLFVEVMSSCRLTICSILICL  192 (508)
Q Consensus       114 ~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~vdl~~~~~~~~~~~~~~~  192 (508)
                      + +...+....+|+.|+.+||.+..++++...++.+.+.+.+.++.+++.+...... .++.+|+.+.+..+++|+++.+
T Consensus        79 ~-~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~  157 (466)
T PLN02655         79 R-DKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQ  157 (466)
T ss_pred             c-CCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHH
Confidence            2 2223445456999999999888888998888888888888888888888654332 2567999999999999999999


Q ss_pred             hcccccchHH----------HHHHHHHHHHHHHhcCC-CcccccccchhhhHhH-HHHHHHHHHHHHHHhHHHHHHHHHH
Q 036686          193 CFGAKISEER----------IKHIESILKDVMLITSP-QLPDFLPILTPLFRRQ-MREAKELRKRQMECLVPLIRNRKAF  260 (508)
Q Consensus       193 ~fg~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~  260 (508)
                      +||.+++...          ...+......+...... .+..++|++.++.... .+...+....+.+++...++++++.
T Consensus       158 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (466)
T PLN02655        158 ALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKR  237 (466)
T ss_pred             HhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999865321          01122233333332221 2234556544332221 2233333444567777777777664


Q ss_pred             HhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHH
Q 036686          261 VEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKE  340 (508)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~E  340 (508)
                      ..        ++....   ++++.+++..    ..++++++.++++++++||+|||+++++|++++|++||++|+++|+|
T Consensus       238 ~~--------~~~~~~---d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~E  302 (466)
T PLN02655        238 IA--------RGEERD---CYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYRE  302 (466)
T ss_pred             hc--------CCCCcc---cHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            31        111122   7899998753    25899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCC
Q 036686          341 IVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE  420 (508)
Q Consensus       341 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  420 (508)
                      |+.+++++. ++++++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++
T Consensus       303 i~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~  381 (466)
T PLN02655        303 IREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEE  381 (466)
T ss_pred             HHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhc
Confidence            999998755 8999999999999999999999999998778999999999999999999999999999999999999999


Q ss_pred             CCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCc
Q 036686          421 FRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNS  500 (508)
Q Consensus       421 F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (508)
                      |+||||++++...     .+...++|||+|+|.|+|++||+.|+++++++||++|++++.++.. +.....++++.++++
T Consensus       382 F~PeR~~~~~~~~-----~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~  455 (466)
T PLN02655        382 WDPERFLGEKYES-----ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHP  455 (466)
T ss_pred             cCccccCCCCccc-----CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCC
Confidence            9999999764311     1246799999999999999999999999999999999999876543 223456778889999


Q ss_pred             eeEEeecC
Q 036686          501 LKAVILPR  508 (508)
Q Consensus       501 ~~v~~~~r  508 (508)
                      ++|++++|
T Consensus       456 ~~~~~~~r  463 (466)
T PLN02655        456 LHAHLKPR  463 (466)
T ss_pred             cEEEEeec
Confidence            99999887


No 17 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.5e-74  Score=516.47  Aligned_cols=456  Identities=23%  Similarity=0.365  Sum_probs=381.4

Q ss_pred             CCCCCCCCCCCCccccchhhhh-hhcCchHHHHHHHHHHhCCeEEEE-cCCeeEEEeCCHHHHHHHHHhcCCCcCCCC-C
Q 036686           29 GPKNLPPGPRGWPLVGNLVQVI-LQRRHFIFIVRDLRKKYGPIFTMQ-MGQRTVVIVTSSQLIHEALVQRGPEFASRP-P  105 (508)
Q Consensus        29 ~~~~~ppgP~~~p~~G~~~~~~-~~~~~~~~~~~~~~~~yG~v~~~~-~~~~~~vvv~~p~~~~~il~~~~~~~~~~~-~  105 (508)
                      .+...+|||+++|++|...... .-..++|+....++++||+||+.. +|+...|+|.||+++..+|++++ .+..++ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccc
Confidence            3556789999999999876422 123478999999999999999999 78899999999999999998876 456664 2


Q ss_pred             CC---CceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhc--cCCccchhhHH
Q 036686          106 DS---PIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAF--DNDLFVEVMSS  180 (508)
Q Consensus       106 ~~---~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~~vdl~~~  180 (508)
                      ..   .....++ +..++... +|+.|.+.|..+...+++++..+.|.+.+++.++++++++....+  ++..+.|+.+.
T Consensus       126 ~~~w~~~rd~~~-~~~Gl~~~-~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~  203 (519)
T KOG0159|consen  126 IEPWVAYRDFRG-GVCGLFLL-EGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQE  203 (519)
T ss_pred             cchhhhhHHhhc-cCCCcccC-CCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHH
Confidence            11   1222233 33455554 799999999999999999999999999999999999999987766  23456799999


Q ss_pred             HHHHHHhhhhhhhcccccc------hHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHH
Q 036686          181 CRLTICSILICLCFGAKIS------EERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLI  254 (508)
Q Consensus       181 ~~~~~~~~~~~~~fg~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i  254 (508)
                      +.++++..++.++||.+++      +++.+.+.+....++......... .++++....+.|++..++.+.+.+++..+|
T Consensus       204 l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~-p~l~r~~~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  204 LYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLM-PSLWRYFPTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhc-chHHHhCCChHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999884      355677778887777665542222 255556667889999999999999999999


Q ss_pred             HHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHH
Q 036686          255 RNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQ  334 (508)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~  334 (508)
                      ++..++.++...    .+....  ..+...+..+      .++.+++..+++++++||.|||+.++.|+||+|++||++|
T Consensus       283 d~~l~~l~~~~~----~~~~~~--~~l~~~L~~~------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q  350 (519)
T KOG0159|consen  283 DNALEELEKQDS----AGSEYT--GSLLELLLRK------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQ  350 (519)
T ss_pred             HHHHHHHHhccc----cccchh--HHHHHHHHHc------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHH
Confidence            999998864331    111111  1344444432      5889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcC-CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCC
Q 036686          335 EKLYKEIVAAVGK-DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD  413 (508)
Q Consensus       335 ~~lr~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~  413 (508)
                      ++|++|+.++... +..++.++++++|||.||||||+||||.+++ +.|...+|..++||.|||||.|.++.+.+.+||+
T Consensus       351 ~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~  429 (519)
T KOG0159|consen  351 QRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPA  429 (519)
T ss_pred             HHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChh
Confidence            9999999999987 5678889999999999999999999999998 6899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccce
Q 036686          414 MWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAF  493 (508)
Q Consensus       414 ~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  493 (508)
                      +|++|++|+|||||+.+.     +..++..++|||.|+|+|+||+||++||.++|++|+++|+++...+.  +....+.+
T Consensus       430 ~F~~p~~F~PeRWL~~~~-----~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~--pv~~~~~~  502 (519)
T KOG0159|consen  430 YFPDPEEFLPERWLKPST-----KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE--PVEYVYRF  502 (519)
T ss_pred             hCCCccccChhhhccccc-----CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC--CccceeEE
Confidence            999999999999999874     23478899999999999999999999999999999999999988763  45667888


Q ss_pred             eeeecCceeEEeecC
Q 036686          494 TVVMKNSLKAVILPR  508 (508)
Q Consensus       494 ~~~~~~~~~v~~~~r  508 (508)
                      ++.|..++++++++|
T Consensus       503 il~P~~~l~f~f~~r  517 (519)
T KOG0159|consen  503 ILVPNRPLRFKFRPR  517 (519)
T ss_pred             EEcCCCCcceeeeeC
Confidence            999999999999987


No 18 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=5.1e-74  Score=553.87  Aligned_cols=456  Identities=24%  Similarity=0.329  Sum_probs=346.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEe
Q 036686            4 IDLVILISGFIFLCLWWRYSSTTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIV   83 (508)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv   83 (508)
                      ++++.+++++++++++..+|...+......||||+++|++||++.+..++   +..+.+++++||++|++++|+.+++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ppgp~~~P~~G~~~~~~~~~---~~~~~~~~~~yG~i~~~~~g~~~~v~i   79 (463)
T PLN02774          3 LVVLGVLVIIVCLCSALLRWNEVRYSKKGLPPGTMGWPLFGETTEFLKQG---PDFMKNQRLRYGSFFKSHILGCPTIVS   79 (463)
T ss_pred             EEehhHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCchhhHHHHHHhh---HHHHHHHHHHhccCccceecCCCeEEE
Confidence            34444444455444444443333334446789999999999998875433   346899999999999999999999999


Q ss_pred             CCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhh-hhhHHHHHHHHHHH
Q 036686           84 TSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQ-CSWIRTWAMESHMK  162 (508)
Q Consensus        84 ~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~  162 (508)
                      +||+.+++++.+++..|...... .....++  ..++.. .+|+.|+.+|+.+ .++|++..++. +.+.+.+.+..+++
T Consensus        80 ~~p~~~~~il~~~~~~~~~~~~~-~~~~~lg--~~~~~~-~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (463)
T PLN02774         80 MDPELNRYILMNEGKGLVPGYPQ-SMLDILG--TCNIAA-VHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLS  154 (463)
T ss_pred             eCHHHHHHHHcCCCCeEEecCCH-HHHHHhC--ccchhh-cCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998777666433221 1112222  223433 3799999999966 67899988875 67787777777777


Q ss_pred             HHHHhhccCCccchhhHHHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHH
Q 036686          163 RLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKEL  242 (508)
Q Consensus       163 ~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  242 (508)
                      ++..     ++.+|+.+.+..+++++++.++||.+.+.. ...+...+..+.... ..+..++|.      ...++..++
T Consensus       155 ~~~~-----~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~~~lp~------~~~~~~~~~  221 (463)
T PLN02774        155 GWDG-----LKTIDIQEKTKEMALLSALKQIAGTLSKPI-SEEFKTEFFKLVLGT-LSLPIDLPG------TNYRSGVQA  221 (463)
T ss_pred             hhCC-----CCCEEeeHHHHHHHHHHHHHHHcCCCChHH-HHHHHHHHHHHhccc-ccCCcCCCC------hhhhHHHHH
Confidence            7642     456899999999999999999999875432 122332222221110 011112221      123455667


Q ss_pred             HHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHH
Q 036686          243 RKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEW  322 (508)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~  322 (508)
                      ++.+.+++.+.++++++..           ....   |+++.+++... +...++++++.+++.++++||+|||+++++|
T Consensus       222 ~~~~~~~~~~~i~~r~~~~-----------~~~~---d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w  286 (463)
T PLN02774        222 RKNIVRMLRQLIQERRASG-----------ETHT---DMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTTSMM  286 (463)
T ss_pred             HHHHHHHHHHHHHHHHhcC-----------CCcc---cHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHH
Confidence            7888888888888765421           0112   89998887432 2225899999999999999999999999999


Q ss_pred             HHHHHhhChHHHHHHHHHHHHHhcC---CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCC
Q 036686          323 AMHHLVLNQEIQEKLYKEIVAAVGK---DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGV  399 (508)
Q Consensus       323 ~l~~L~~~P~~~~~lr~Ei~~~~~~---~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~  399 (508)
                      ++++|++||++|+|+++|++++++.   ++.++++++++||||+|||+|+||++|+++. +.|.+.+|++++||.||||+
T Consensus       287 ~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt  365 (463)
T PLN02774        287 AVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGW  365 (463)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCC
Confidence            9999999999999999999999864   3468899999999999999999999999986 57999999999999999999


Q ss_pred             EEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeec
Q 036686          400 HVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLP  479 (508)
Q Consensus       400 ~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~  479 (508)
                      .|+++.+.+||||++|+||++|+||||++++..       ....|+|||+|+|.|+|++||.+|++++++.|+++|++++
T Consensus       366 ~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~  438 (463)
T PLN02774        366 RIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE-------SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEE  438 (463)
T ss_pred             EEEEehHHhcCCcccCCChhccCchhcCCCCcC-------CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEE
Confidence            999999999999999999999999999975321       1236999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccceeeeecCceeEEeec
Q 036686          480 VPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                      .++..+..    ..++.|+++++|+++|
T Consensus       439 ~~~~~~~~----~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        439 VGGDKLMK----FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             CCCCcccc----CCCCCCCCCceEEeee
Confidence            87643211    1245588999999975


No 19 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.7e-72  Score=547.24  Aligned_cols=467  Identities=26%  Similarity=0.444  Sum_probs=343.8

Q ss_pred             CCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHh-CCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKY-GPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP  108 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~  108 (508)
                      +...||||.++|++|+++.+....... ..+.+..++| |+||++++|+.++|+|+||+.+++++.+++..|..++....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~-~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRS-KYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcc-hhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            445799999999999998864322211 1244555555 79999999999999999999999999988888988765433


Q ss_pred             ceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhh
Q 036686          109 IRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      .. .++.+..++.+..+|+.|+.+|+.+...+++......+....+.+++.+++.+.+..+. +.++|+.+.+..+++++
T Consensus       117 ~~-~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~vd~~~~~~~~t~~v  194 (534)
T PLN03018        117 ME-TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQR-SETVDVRELSRVYGYAV  194 (534)
T ss_pred             hh-hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCceeHHHHHHHHHHHH
Confidence            32 23333234555556999999999765434455445555556666788898888754333 45799999999999999


Q ss_pred             hhhhhcccccch--------HH-HHHHHHHHHHHHHh---cCC-Ccccccc-cchhhh-HhHHHHHHHHHHHHHHHhHHH
Q 036686          189 LICLCFGAKISE--------ER-IKHIESILKDVMLI---TSP-QLPDFLP-ILTPLF-RRQMREAKELRKRQMECLVPL  253 (508)
Q Consensus       189 ~~~~~fg~~~~~--------~~-~~~~~~~~~~~~~~---~~~-~~~~~~p-~l~~~~-~~~~~~~~~~~~~~~~~~~~~  253 (508)
                      ++.++||.+++.        .. ...+..........   ... ...+.+| ++.++. .....+.......+.+++.+.
T Consensus       195 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (534)
T PLN03018        195 TMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPI  274 (534)
T ss_pred             HHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHH
Confidence            999999998631        11 11111111211111   111 1112233 222111 111223444556677888888


Q ss_pred             HHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCC-CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChH
Q 036686          254 IRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGRE-QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQE  332 (508)
Q Consensus       254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~  332 (508)
                      ++++++...+..     ......   |+++.+++...+++. .++++++++++.++++||+|||+++++|++++|++||+
T Consensus       275 i~~~~~~~~~~~-----~~~~~~---d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~  346 (534)
T PLN03018        275 IDERVELWREKG-----GKAAVE---DWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPE  346 (534)
T ss_pred             HHHHHHHhhhcc-----CCCCcc---cHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH
Confidence            888776432100     001112   889999875433222 48999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCC
Q 036686          333 IQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDP  412 (508)
Q Consensus       333 ~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~  412 (508)
                      +|+++++||+++++.++.++.+++.+||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||
T Consensus       347 ~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp  426 (534)
T PLN03018        347 ILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNP  426 (534)
T ss_pred             HHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCc
Confidence            99999999999998777889999999999999999999999999987789999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCCCCCCcc-ccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCC-CCCCCcc
Q 036686          413 DMWSDPGEFRPERFLEGDGVDVD-VTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGA-PPDPTET  490 (508)
Q Consensus       413 ~~~~~p~~F~p~R~l~~~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~-~~~~~~~  490 (508)
                      ++|+||++|+||||++++++..+ ........|+|||+|+|.|+|++||++|+++++++|+++|++++.++. ..+....
T Consensus       427 ~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  506 (534)
T PLN03018        427 KIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEED  506 (534)
T ss_pred             ccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccc
Confidence            99999999999999975432110 001235689999999999999999999999999999999999987653 2222222


Q ss_pred             cceeeeecCceeEEeecC
Q 036686          491 YAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       491 ~~~~~~~~~~~~v~~~~r  508 (508)
                      .+ ++..+.+++|+++||
T Consensus       507 ~~-~~~~p~~~~v~~~~R  523 (534)
T PLN03018        507 DA-SLLMAKPLLLSVEPR  523 (534)
T ss_pred             cc-ceecCCCeEEEEEec
Confidence            23 444567999999998


No 20 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.6e-72  Score=545.78  Aligned_cols=449  Identities=18%  Similarity=0.242  Sum_probs=339.0

Q ss_pred             CCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEE---EEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc
Q 036686           33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFT---MQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI  109 (508)
Q Consensus        33 ~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~---~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~  109 (508)
                      ..|||.++|++|++..+..+...+++++.++..+||..++   +++|+.++++|+||+.+++||.++...|.+++.....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            4789999999999987765555677777887778997655   6789999999999999999998876677665432221


Q ss_pred             eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhh--hhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHh
Q 036686          110 RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQC--SWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICS  187 (508)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~--~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~  187 (508)
                      ...+  | .++.+. +|+.|+.+||.+ .+.|+...+..+  ...+.++.+.+++.+.+.... +..+|+.+.+..+++|
T Consensus       112 ~~~~--g-~gl~~~-~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~vd~~~~~~~~t~d  185 (500)
T PLN02169        112 FDVL--G-EGILTV-DFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHE-NIIIDLQDVFMRFMFD  185 (500)
T ss_pred             HHhh--c-Cccccc-CcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEeHHHHHHHHHHH
Confidence            1112  2 345554 699999999965 789998877643  355667777788888654333 5689999999999999


Q ss_pred             hhhhhhcccccchHH----HHHHHHHHHHHHHhcCCCcccccccchh----hh-HhHHHHHHHHHHHHHHHhHHHHHHHH
Q 036686          188 ILICLCFGAKISEER----IKHIESILKDVMLITSPQLPDFLPILTP----LF-RRQMREAKELRKRQMECLVPLIRNRK  258 (508)
Q Consensus       188 ~~~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~l~~----~~-~~~~~~~~~~~~~~~~~~~~~i~~~~  258 (508)
                      +++.++||.+.+...    ...+............  ...+.|++.+    ++ .+..++..++.+.+.+++.+.|++++
T Consensus       186 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~  263 (500)
T PLN02169        186 TSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY--YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRR  263 (500)
T ss_pred             HHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH--hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998764211    1123333222221111  1112232111    11 22345667788889999999998887


Q ss_pred             HHHhhCCCCCCCCccccccchhhHHhhhcCCCCC---CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHH
Q 036686          259 AFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTG---REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQE  335 (508)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~---~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~  335 (508)
                      +...+..    +.+....   |+++.+++...++   ...++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       264 ~~~~~~~----~~~~~~~---d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~  336 (500)
T PLN02169        264 KEEISRA----ETEPYSK---DALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMA  336 (500)
T ss_pred             HHhhccc----cccCCCc---CHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHH
Confidence            6421110    0011112   7888888754221   1247889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccc-cCCeeeCCCCEEEEcccccccCCCC
Q 036686          336 KLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTE-LGGYSIPAGVHVEFYTAWLTEDPDM  414 (508)
Q Consensus       336 ~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~-~~g~~ip~G~~v~~~~~~~~~d~~~  414 (508)
                      |+++||++++      +++++.+||||+|||+|||||+|++|.. .|.+.+|.+ ++|+.|||||.|.++.+++||||++
T Consensus       337 kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~  409 (500)
T PLN02169        337 KIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFN-HKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSV  409 (500)
T ss_pred             HHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcC-ceecCCCCCccCCEEECCCCEEEEcHHHhhCCccc
Confidence            9999999874      5689999999999999999999999986 466565555 5999999999999999999999999


Q ss_pred             C-CCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccce
Q 036686          415 W-SDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAF  493 (508)
Q Consensus       415 ~-~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  493 (508)
                      | +||++|+||||++++++..   ...+..|+|||+|+|+|+|++||++|+++++++|+++|+++++++..+  ......
T Consensus       410 w~~dP~~F~PeRfl~~~~~~~---~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~  484 (500)
T PLN02169        410 WGEDALDFKPERWISDNGGLR---HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSI  484 (500)
T ss_pred             cCCChhhcCccccCCCCCCcc---CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccce
Confidence            9 8999999999997643211   123678999999999999999999999999999999999998765432  334567


Q ss_pred             eeeecCceeEEeecC
Q 036686          494 TVVMKNSLKAVILPR  508 (508)
Q Consensus       494 ~~~~~~~~~v~~~~r  508 (508)
                      +++++++++|++++|
T Consensus       485 ~l~~~~gl~l~l~~~  499 (500)
T PLN02169        485 LLRMKHGLKVTVTKK  499 (500)
T ss_pred             EEecCCCEEEEEEeC
Confidence            889999999999987


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4.2e-74  Score=562.78  Aligned_cols=453  Identities=31%  Similarity=0.513  Sum_probs=363.7

Q ss_pred             CCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEe
Q 036686           34 PPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVF  113 (508)
Q Consensus        34 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  113 (508)
                      ||||+++|++||.+.+.. ..+.+..+.+++++||+||++++++.++++|+||+.+++++.++...|+..+....+....
T Consensus         1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~   79 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR   79 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence            899999999999999875 4567888999999999999999999999999999999999988766665542221121100


Q ss_pred             -ecCccceeeCCCChhHHHHHHHhHhhhcChh-hhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhh
Q 036686          114 -SVGKCAINSAEYGPLWRSLRRNFVTELITPT-RVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILIC  191 (508)
Q Consensus       114 -~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~  191 (508)
                       ...+.++... +++.|+.+|+.+ .+.|+.. .+ .+.+.+.+.++.+++.+...... .+.+|+.++++.+++++++.
T Consensus        80 ~~~~~~~l~~~-~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~-~~~vd~~~~~~~~~~d~i~~  155 (463)
T PF00067_consen   80 GPFGGKGLFFS-DGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGS-SGPVDLFDWLRRFALDVIGR  155 (463)
T ss_dssp             HHHTTTSSTTS-SHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTS-ESEEEHHHHHHHHHHHHHHH
T ss_pred             ccccccccccc-cccccccccccc-cccccccccc-ccccccccccccccccccccccc-cceeeeeccccccccccccc
Confidence             1123344443 579999999966 5677766 66 89999999999999999887654 34799999999999999999


Q ss_pred             hhcccccc---hHHHHHHHHHHHHHHHhcCC---CcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCC
Q 036686          192 LCFGAKIS---EERIKHIESILKDVMLITSP---QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ  265 (508)
Q Consensus       192 ~~fg~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  265 (508)
                      ++||.+++   +.....+.+....+......   .+...+|++.+.+....+...++.+.+.+++.+.++++++..... 
T Consensus       156 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  234 (463)
T PF00067_consen  156 VLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDG-  234 (463)
T ss_dssp             HHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-
T ss_pred             ccccceeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            99999865   33334455555555443321   233445655455556667777788899999999999988876321 


Q ss_pred             CCCCCCccccccchhhHHhhhcCC-CCCC-CCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 036686          266 NPNSESEMVSPIGAAYVDSLFGLE-PTGR-EQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVA  343 (508)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~ll~~~-~~~~-~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~  343 (508)
                            .....   ++++.+++.. ..+. ..+++++++++++.+++||+|||+.+++|++++|++||++|+++++||++
T Consensus       235 ------~~~~~---d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~  305 (463)
T PF00067_consen  235 ------DESRR---DLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDS  305 (463)
T ss_dssp             ------SSSCS---SHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             ------ccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                  11122   8899988875 2222 27999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 036686          344 AVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRP  423 (508)
Q Consensus       344 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  423 (508)
                      +.++++.++.+++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+|
T Consensus       306 ~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P  385 (463)
T PF00067_consen  306 VLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDP  385 (463)
T ss_dssp             HTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--T
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99777788999999999999999999999999996678999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeE
Q 036686          424 ERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKA  503 (508)
Q Consensus       424 ~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  503 (508)
                      +||++.+..    .......|+|||.|+|.|+|++||++|+++++++||++|+++++++...........++.++.+++|
T Consensus       386 ~R~~~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (463)
T PF00067_consen  386 ERFLDERGI----SNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKV  461 (463)
T ss_dssp             TGGBTTTST----BCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEE
T ss_pred             ccccccccc----cccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEE
Confidence            999998651    1135788999999999999999999999999999999999999876554443333345667778887


Q ss_pred             Ee
Q 036686          504 VI  505 (508)
Q Consensus       504 ~~  505 (508)
                      .+
T Consensus       462 ~~  463 (463)
T PF00067_consen  462 KF  463 (463)
T ss_dssp             EE
T ss_pred             eC
Confidence            64


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=4.1e-72  Score=548.73  Aligned_cols=452  Identities=21%  Similarity=0.316  Sum_probs=333.2

Q ss_pred             CCCCCCCccccchhhhhhhcCchHHHHHHHHHHh---CCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc-
Q 036686           34 PPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKY---GPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI-  109 (508)
Q Consensus        34 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y---G~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~-  109 (508)
                      +|||+++|++||++.+.....    .+.+|.++|   |++|++++|+.+.++++||+.+++|+.++...|.+.+..... 
T Consensus        32 ~pgp~~~p~~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  107 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKNYD----RMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM  107 (516)
T ss_pred             cCCCCCCCeecchHHHHhccc----hHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence            799999999999877654322    245666666   899999999999999999999999997665556544321101 


Q ss_pred             eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHH-HHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhh
Q 036686          110 RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIR-TWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      ...++  . ++.. .+|+.|+++||.+ .+.|+..+++.+.+.+ .+.++.+.+.+...... +..+|+.+++..+++|+
T Consensus       108 ~~~~g--~-~l~~-~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~-~~~vd~~~~~~~~~~dv  181 (516)
T PLN03195        108 EVLLG--D-GIFN-VDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFA-NQVVDMQDLFMRMTLDS  181 (516)
T ss_pred             HHHhc--C-eeec-cCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEcHHHHHHHHHHHH
Confidence            11122  2 3444 4799999999965 7889999999988865 55566777767643222 56799999999999999


Q ss_pred             hhhhhcccccchHH----HHHHHHHHHHHHHhcCCCcccccccchhhh-HhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          189 LICLCFGAKISEER----IKHIESILKDVMLITSPQLPDFLPILTPLF-RRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       189 ~~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      ++.++||.+++...    ...+.+................++.+.... ....+...+..+.+.+++.+.++++++....
T Consensus       182 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        182 ICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             HHHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999874311    112332222222111000000111111111 1112334556677888888888887765421


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVA  343 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~  343 (508)
                      .+.   ..+....   ++++.+++...+....+++++++++++++++||+|||+++++|++++|++||++|+|+|+|+++
T Consensus       262 ~~~---~~~~~~~---d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~  335 (516)
T PLN03195        262 ARK---SGKKVKH---DILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKA  335 (516)
T ss_pred             ccc---ccccccc---cHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            110   0011122   8899998754332336999999999999999999999999999999999999999999999999


Q ss_pred             HhcC--------------------CCCCCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc-CCeeeCCCCEEE
Q 036686          344 AVGK--------------------DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL-GGYSIPAGVHVE  402 (508)
Q Consensus       344 ~~~~--------------------~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~ip~G~~v~  402 (508)
                      ++++                    ++.++++++.+||||+|||+||||++|+++.. .|.+.+|..+ +|+.|||||.|.
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~  414 (516)
T PLN03195        336 LEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVT  414 (516)
T ss_pred             hhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEE
Confidence            8643                    24578999999999999999999999999986 4656666555 999999999999


Q ss_pred             EcccccccCCCCC-CCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCC
Q 036686          403 FYTAWLTEDPDMW-SDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVP  481 (508)
Q Consensus       403 ~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~  481 (508)
                      ++.+++||||++| +||++|+||||++++...    ...+..|+|||+|+|+|+|++||++|++++++.|+++|++++.+
T Consensus       415 ~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~----~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~  490 (516)
T PLN03195        415 YVPYSMGRMEYNWGPDAASFKPERWIKDGVFQ----NASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVP  490 (516)
T ss_pred             EehHhhccChhhhccChhhcCCcccCCCCCcC----CCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecC
Confidence            9999999999999 999999999999643210    12346799999999999999999999999999999999999876


Q ss_pred             CCCCCCCcccceeeeecCceeEEeecC
Q 036686          482 GAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +.+.  ......++.++.+++|++++|
T Consensus       491 ~~~~--~~~~~~~~~~~~~~~v~~~~r  515 (516)
T PLN03195        491 GHPV--KYRMMTILSMANGLKVTVSRR  515 (516)
T ss_pred             CCcc--eeeeeeEEecCCCEEEEEEeC
Confidence            5432  333445778899999999987


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=7.7e-71  Score=540.86  Aligned_cols=439  Identities=21%  Similarity=0.308  Sum_probs=332.5

Q ss_pred             hcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHH
Q 036686           52 QRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRS  131 (508)
Q Consensus        52 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  131 (508)
                      .+++++..+.+||++|||||++++|+.++++|+||+.+++|+.++...|.+.+.........  + .++.. .+|+.|+.
T Consensus       149 ~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~--g-~~l~~-~dge~wr~  224 (633)
T PLN02738        149 RGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM--G-KGLIP-ADGEIWRV  224 (633)
T ss_pred             cCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc--C-Cceec-CCcHHHHH
Confidence            35678999999999999999999999999999999999999987766676653321111111  2 23443 47999999


Q ss_pred             HHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhcccccchHH-HHHHHHHH
Q 036686          132 LRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEER-IKHIESIL  210 (508)
Q Consensus       132 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~  210 (508)
                      +|+.+ .+.|+...++.+.+.+.+.++.+++++.+.... ++.+|+...+..+++|+++.++||.+++... .+.+.+.+
T Consensus       225 rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~-g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~  302 (633)
T PLN02738        225 RRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASD-GEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAV  302 (633)
T ss_pred             HHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHH
Confidence            88855 789999999999999999999999999765443 6789999999999999999999999875311 11222222


Q ss_pred             HHHHHhcCC-Ccccccccchhhh---HhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCC--ccccccchhhHHh
Q 036686          211 KDVMLITSP-QLPDFLPILTPLF---RRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSES--EMVSPIGAAYVDS  284 (508)
Q Consensus       211 ~~~~~~~~~-~~~~~~p~l~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  284 (508)
                      ......... ....+.+|..+.+   ....++..+..+.+.+++..+++..+...++.+.....+  ...+.   ++++.
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~---dil~~  379 (633)
T PLN02738        303 YTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDP---SILHF  379 (633)
T ss_pred             HHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccc---hHHHH
Confidence            222211100 1111112221111   111233444555566666666655443322111000000  11122   78888


Q ss_pred             hhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHH
Q 036686          285 LFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDA  364 (508)
Q Consensus       285 ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a  364 (508)
                      +++..    ..++++++.++++.+++||+|||+.+++|++++|++||++|+|+|+|+++++++ +.++++++++||||+|
T Consensus       380 Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~A  454 (633)
T PLN02738        380 LLASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTR  454 (633)
T ss_pred             HHHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHH
Confidence            88653    258999999999999999999999999999999999999999999999999984 6689999999999999


Q ss_pred             HHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCcc
Q 036686          365 VVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKM  444 (508)
Q Consensus       365 ~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~  444 (508)
                      ||+|+|||+|+++.. .|.+.+|.+++||.|||||.|+++.+.+||||++|+||++|+||||+....+..  .......|
T Consensus       455 VIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~--~~~~~~~~  531 (633)
T PLN02738        455 VINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPN--ETNQNFSY  531 (633)
T ss_pred             HHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCcc--ccCCCCce
Confidence            999999999999985 588899999999999999999999999999999999999999999985422100  01235689


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          445 VPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       445 ~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +|||.|+|.|+|++||++|+++++++|+++|++++.++.. +.....++++.++++++|++++|
T Consensus       532 vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        532 LPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             eCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEEC
Confidence            9999999999999999999999999999999999887643 23334567888999999999987


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=5.6e-71  Score=531.62  Aligned_cols=440  Identities=20%  Similarity=0.306  Sum_probs=339.8

Q ss_pred             CCCCCCCCCCCCCccccchhhhhhh--cCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCC
Q 036686           28 GGPKNLPPGPRGWPLVGNLVQVILQ--RRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPP  105 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~  105 (508)
                      +.+.+.||||.++|++|+++.+...  ..+.+.++.+++++||+||++++|+.++++++||+.++++|.+++..|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4566789999999999999887543  23567779999999999999999999999999999999999888777764422


Q ss_pred             CCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhh-hhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHH
Q 036686          106 DSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQC-SWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLT  184 (508)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~  184 (508)
                       .....+++  ..++... +|+.|+++|+.+ .+.|+...+... .+.+.+.+..+++.+.    . +..+|+.+.+..+
T Consensus        83 -~~~~~l~g--~~~~~~~-~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~  152 (452)
T PLN03141         83 -KSLTELMG--KSSILLI-NGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----D-DPPVLVQDETKKI  152 (452)
T ss_pred             -hhHHHHhC--ccccccc-CcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----C-CCCEEhHHHHHHH
Confidence             11222233  2234443 799999999855 667877666653 4455555555555442    1 5678999999999


Q ss_pred             HHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhC
Q 036686          185 ICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG  264 (508)
Q Consensus       185 ~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (508)
                      ++++++.++||.+.+.+ ...+...+..+..... .++.++|..      ...+..++.+++.+++.+.+++++......
T Consensus       153 ~~~vi~~~~~G~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~p~~------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  224 (452)
T PLN03141        153 AFEVLVKALISLEPGEE-MEFLKKEFQEFIKGLM-SLPIKLPGT------RLYRSLQAKKRMVKLVKKIIEEKRRAMKNK  224 (452)
T ss_pred             HHHHHHHHHcCCCchHH-HHHHHHHHHHHhhhHH-hCccCCCch------HhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999876432 2333333433332221 111122211      123445678889999999998887654211


Q ss_pred             CCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 036686          265 QNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAA  344 (508)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~  344 (508)
                      .+   ..+....   ++++.+++..   ...+++++++++++.+++||+|||+++++|++++|++||++|+++++|++++
T Consensus       225 ~~---~~~~~~~---d~l~~ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~  295 (452)
T PLN03141        225 EE---DETGIPK---DVVDVLLRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKL  295 (452)
T ss_pred             Cc---cccCChh---hHHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            00   0000112   7888888753   2368999999999999999999999999999999999999999999999988


Q ss_pred             hc----CCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCC
Q 036686          345 VG----KDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE  420 (508)
Q Consensus       345 ~~----~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  420 (508)
                      .+    .++.++++++.+||||+|||+|++|++|+++. ++|.+.+|++++||.||||+.|+++.+++|+||++|+||++
T Consensus       296 ~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~  374 (452)
T PLN03141        296 KRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQ  374 (452)
T ss_pred             HhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccc
Confidence            63    23457889999999999999999999999975 67999999999999999999999999999999999999999


Q ss_pred             CCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCc
Q 036686          421 FRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNS  500 (508)
Q Consensus       421 F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (508)
                      |+||||++++.        .+..|+|||+|+|.|+|++||.+|+++++++|+++|++++.++...     ...++.|+.+
T Consensus       375 F~PeRfl~~~~--------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~  441 (452)
T PLN03141        375 FNPWRWQEKDM--------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRK  441 (452)
T ss_pred             cCcccccCCCC--------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCCC
Confidence            99999997532        3467999999999999999999999999999999999988765321     1247888999


Q ss_pred             eeEEeecC
Q 036686          501 LKAVILPR  508 (508)
Q Consensus       501 ~~v~~~~r  508 (508)
                      ++|+++||
T Consensus       442 ~~~~~~~~  449 (452)
T PLN03141        442 LPIWVTRI  449 (452)
T ss_pred             ceEEEEeC
Confidence            99999997


No 25 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.4e-70  Score=529.39  Aligned_cols=427  Identities=23%  Similarity=0.344  Sum_probs=336.9

Q ss_pred             CCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           28 GGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      ..+.+.||||.++|++|+++.+..  .+.+.++.+++++||+++++++++.++++++||+.+++++.++...|.  +...
T Consensus        31 ~~~~~~Ppgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~  106 (463)
T PLN02196         31 STKLPLPPGTMGWPYVGETFQLYS--QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFP  106 (463)
T ss_pred             CCCCCCCCCCCCCCccchHHHHHh--cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCc
Confidence            345677899999999999877542  356777999999999999999999999999999999999987766563  2211


Q ss_pred             Cc-eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHH
Q 036686          108 PI-RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTIC  186 (508)
Q Consensus       108 ~~-~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~  186 (508)
                      .. ...+  |..++.+ .+|+.|+++||.+ .+.|++.+++.+.+.+.+.+.++++.+.      ++.+|+.+++..+++
T Consensus       107 ~~~~~~~--g~~~l~~-~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~------~~~v~~~~~~~~~~~  176 (463)
T PLN02196        107 ASKERML--GKQAIFF-HQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE------GTQINTYQEMKTYTF  176 (463)
T ss_pred             hHHHHHc--Ccccccc-cCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC------CCeEEeHHHHHHHHH
Confidence            11 1112  2223444 3799999999966 6789999999999999999988888763      346899999999999


Q ss_pred             hhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCC
Q 036686          187 SILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQN  266 (508)
Q Consensus       187 ~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (508)
                      ++++.++||.+.... ...+.+.........     ..+|+..+  ....++..++.+.+.+++.+.++++++..     
T Consensus       177 ~v~~~~~fG~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----  243 (463)
T PLN02196        177 NVALLSIFGKDEVLY-REDLKRCYYILEKGY-----NSMPINLP--GTLFHKSMKARKELAQILAKILSKRRQNG-----  243 (463)
T ss_pred             HHHHHHHcCCCCchH-HHHHHHHHHHHhcch-----hcccccCC--CccchHHHHHHHHHHHHHHHHHHHHhhcC-----
Confidence            999999999885321 122222222211111     11222111  11123455667778888888887765421     


Q ss_pred             CCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhc
Q 036686          267 PNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG  346 (508)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~  346 (508)
                         .   ...   ++++.+++.    ...++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+
T Consensus       244 ---~---~~~---d~l~~ll~~----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~  310 (463)
T PLN02196        244 ---S---SHN---DLLGSFMGD----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRK  310 (463)
T ss_pred             ---C---Ccc---cHHHHHHhc----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence               0   112   788888753    236899999999999999999999999999999999999999999999999886


Q ss_pred             C---CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 036686          347 K---DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRP  423 (508)
Q Consensus       347 ~---~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  423 (508)
                      .   ++.++++++++||||+|||+||||++|++++. .|.+.+|+.++||.|||||.|+++.+++|+||++|+||++|+|
T Consensus       311 ~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~P  389 (463)
T PLN02196        311 DKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDP  389 (463)
T ss_pred             ccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccCh
Confidence            4   35688999999999999999999999999885 5899999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeE
Q 036686          424 ERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKA  503 (508)
Q Consensus       424 ~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  503 (508)
                      |||++..         .+..|+|||+|+|.|+|+++|++|+++++++|+++|++++.++.. +  ..+..+..|+.+++|
T Consensus       390 eRfl~~~---------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~--~~~~~~~~p~~~~~~  457 (463)
T PLN02196        390 SRFEVAP---------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN-G--IQYGPFALPQNGLPI  457 (463)
T ss_pred             hhhcCCC---------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC-c--eEEcccccCCCCceE
Confidence            9999632         246899999999999999999999999999999999999876432 2  234556778999999


Q ss_pred             Eeec
Q 036686          504 VILP  507 (508)
Q Consensus       504 ~~~~  507 (508)
                      ++++
T Consensus       458 ~~~~  461 (463)
T PLN02196        458 ALSR  461 (463)
T ss_pred             EEec
Confidence            9875


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=7.7e-70  Score=532.09  Aligned_cols=443  Identities=22%  Similarity=0.327  Sum_probs=343.0

Q ss_pred             CCCCCCCCCCCCCCCccccchhhhhhh--cCchHHHHHHHHHHhCC--eEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcC
Q 036686           26 TGGGPKNLPPGPRGWPLVGNLVQVILQ--RRHFIFIVRDLRKKYGP--IFTMQMGQRTVVIVTSSQLIHEALVQRGPEFA  101 (508)
Q Consensus        26 ~~~~~~~~ppgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~--v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~  101 (508)
                      .+..+.+.||||+++|++|+++.+...  ..+.+..+.+++++||+  ++++++++.+.++++||+.+++++.++ +.|.
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~  114 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFE  114 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Cccc
Confidence            344556789999999999999887542  34677789999999997  789999999999999999999999765 4565


Q ss_pred             CCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhc-ChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHH
Q 036686          102 SRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELI-TPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS  180 (508)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~  180 (508)
                      +........ .++  ...+.. .+|+.|+++|+.+ .+.| +++.++.+.+.+.+.+..+++.+..     .+.+|+.+.
T Consensus       115 ~~~~~~~~~-~~g--~~~~~~-~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~-----~~~v~~~~~  184 (490)
T PLN02302        115 PGWPESTVE-LIG--RKSFVG-ITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK-----MGEIEFLTE  184 (490)
T ss_pred             cCCchhHHH-Hhc--cccccc-cCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEehHHH
Confidence            443222111 122  222333 4799999999966 5566 5778999999999999999988853     345899999


Q ss_pred             HHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 036686          181 CRLTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAF  260 (508)
Q Consensus       181 ~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  260 (508)
                      +..+++++++.++||.+.+... +.+...+..+..... .+...+|..      ..++..++.+.+.+++.+.++++++.
T Consensus       185 ~~~~~~~vi~~~~~G~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~p~~------~~~~~~~~~~~l~~~~~~~i~~~~~~  256 (490)
T PLN02302        185 LRKLTFKIIMYIFLSSESELVM-EALEREYTTLNYGVR-AMAINLPGF------AYHRALKARKKLVALFQSIVDERRNS  256 (490)
T ss_pred             HHHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHHHhh-hCCcCCCch------hhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998864322 222222222211111 111112211      12344456677888888888887664


Q ss_pred             HhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHH
Q 036686          261 VEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKE  340 (508)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~E  340 (508)
                      ..++.      .....   ++++.+++...+++..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|
T Consensus       257 ~~~~~------~~~~~---d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E  327 (490)
T PLN02302        257 RKQNI------SPRKK---DMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAE  327 (490)
T ss_pred             hhccC------CCCcC---CHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            32110      01112   8999998765433336899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC----CCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCC
Q 036686          341 IVAAVGKDG----LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWS  416 (508)
Q Consensus       341 i~~~~~~~~----~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  416 (508)
                      ++++.+...    .++++++++||||+|||+|+||++|+++.. .|.+.+|++++||.||||+.|+++.+++||||++|+
T Consensus       328 ~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~  406 (490)
T PLN02302        328 QEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYP  406 (490)
T ss_pred             HHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCC
Confidence            999986421    378899999999999999999999999874 689999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeee
Q 036686          417 DPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVV  496 (508)
Q Consensus       417 ~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  496 (508)
                      ||++|+||||++...        .+..|+|||+|+|.|+|++||.+|+++++++|+++|++++.++.. .  ......+.
T Consensus       407 dP~~F~PeR~~~~~~--------~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~--~~~~~~~~  475 (490)
T PLN02302        407 NPKEFDPSRWDNYTP--------KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-K--VMYLPHPR  475 (490)
T ss_pred             CccccChhhcCCCCC--------CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-c--ceeCCCCC
Confidence            999999999996432        346799999999999999999999999999999999999886432 1  12223477


Q ss_pred             ecCceeEEeecC
Q 036686          497 MKNSLKAVILPR  508 (508)
Q Consensus       497 ~~~~~~v~~~~r  508 (508)
                      |..++.+++++|
T Consensus       476 p~~~~~~~~~~~  487 (490)
T PLN02302        476 PKDNCLARITKV  487 (490)
T ss_pred             CCCCceEEEEec
Confidence            888999999886


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=6.4e-70  Score=522.45  Aligned_cols=458  Identities=19%  Similarity=0.276  Sum_probs=342.5

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccchhhhhhh--cCchHHHHHHHHHHhCCeEEEEcCCeeEEEeC
Q 036686            7 VILISGFIFLCLWWRYSSTTGGGPKNLPPGPRGWPLVGNLVQVILQ--RRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVT   84 (508)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~   84 (508)
                      .+++++.+.+++.++..+.. ..+.+.||||.++|++|+++.+...  ..+.+..+.+++++||+++++++++.+.++|+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~-~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~   84 (472)
T PLN02987          6 FLLLLSSLAAIFFLLLRRTR-YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSA   84 (472)
T ss_pred             HHHHHHHHHHHHHHHHHhhc-cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEe
Confidence            33333333344433333222 3455679999999999999886432  23566778999999999999999999999999


Q ss_pred             CHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHH
Q 036686           85 SSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRL  164 (508)
Q Consensus        85 ~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l  164 (508)
                      ||+.+++++.++...|.++... .....++  ..++.+. +|+.|+++|+.+ .++++...++.+.   ..++.++++..
T Consensus        85 ~pe~~~~il~~~~~~f~~~~~~-~~~~~lg--~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~~~~~  156 (472)
T PLN02987         85 DPETNRFILQNEGKLFECSYPG-SISNLLG--KHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRLIRFN  156 (472)
T ss_pred             CHHHHHHHHhCCCceEEecCcH-HHHHHhC--ccccccc-CcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHHHHHH
Confidence            9999999998887777554321 1112232  2345454 699999999965 4444444444432   12233333322


Q ss_pred             HHhhccCCccchhhHHHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHH
Q 036686          165 NSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRK  244 (508)
Q Consensus       165 ~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~  244 (508)
                      ....   .+.+++.+.+..++++++++++||.+.+... +.+...+......   ....++|++.    ...++..++++
T Consensus       157 ~~~~---~~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~-~~~~~~~~~~~~~---~~~~~~p~l~----~~~~~~~~~~~  225 (472)
T PLN02987        157 LDSW---SSRVLLMEEAKKITFELTVKQLMSFDPGEWT-ESLRKEYVLVIEG---FFSVPLPLFS----TTYRRAIQART  225 (472)
T ss_pred             HHhh---ccceehHHHHHHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHhh---hhcCCCcCCC----chHHHHHHHHH
Confidence            2211   2358999999999999999999998764321 2222222222211   1222345432    23556777888


Q ss_pred             HHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHH
Q 036686          245 RQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAM  324 (508)
Q Consensus       245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l  324 (508)
                      ++.+++.+.++++++....       +.....   |+++.+++..    .+++++++.++++++++||+|||+++++|++
T Consensus       226 ~~~~~~~~~i~~r~~~~~~-------~~~~~~---d~l~~ll~~~----~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l  291 (472)
T PLN02987        226 KVAEALTLVVMKRRKEEEE-------GAEKKK---DMLAALLASD----DGFSDEEIVDFLVALLVAGYETTSTIMTLAV  291 (472)
T ss_pred             HHHHHHHHHHHHHHhhhhc-------cCcccc---cHHHHHHhcC----CCCCHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence            9999999999988764321       111122   8999998753    2589999999999999999999999999999


Q ss_pred             HHHhhChHHHHHHHHHHHHHhc---CCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEE
Q 036686          325 HHLVLNQEIQEKLYKEIVAAVG---KDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV  401 (508)
Q Consensus       325 ~~L~~~P~~~~~lr~Ei~~~~~---~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v  401 (508)
                      ++|++||++|+++++|++++.+   +++.++++++.+|||++||++|+||++|+++. ++|.+.+|++++||.|||||.|
T Consensus       292 ~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v  370 (472)
T PLN02987        292 KFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKV  370 (472)
T ss_pred             HHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEE
Confidence            9999999999999999999875   33457889999999999999999999999975 5799999999999999999999


Q ss_pred             EEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCC
Q 036686          402 EFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVP  481 (508)
Q Consensus       402 ~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~  481 (508)
                      +++.+.+|+||++|+||++|+||||++.+..     ......++|||+|+|.|+|++||+.|++++++.|+++|++++.+
T Consensus       371 ~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~  445 (472)
T PLN02987        371 FASFRAVHLDHEYFKDARTFNPWRWQSNSGT-----TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAE  445 (472)
T ss_pred             EEehHHhhCCcccCCCccccCcccCCCCCCC-----CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECC
Confidence            9999999999999999999999999975331     11346799999999999999999999999999999999999876


Q ss_pred             CCCCCCCcccceeeeecCceeEEeecC
Q 036686          482 GAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +...    ....++.|.+++++++++|
T Consensus       446 ~~~~----~~~~~~~p~~~~~~~~~~r  468 (472)
T PLN02987        446 QDKL----VFFPTTRTQKRYPINVKRR  468 (472)
T ss_pred             CCce----eecccccCCCCceEEEEec
Confidence            5432    2234888989999999987


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-70  Score=482.50  Aligned_cols=446  Identities=22%  Similarity=0.332  Sum_probs=348.5

Q ss_pred             CCCCCCCCC-ccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC-Cc
Q 036686           32 NLPPGPRGW-PLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS-PI  109 (508)
Q Consensus        32 ~~ppgP~~~-p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~-~~  109 (508)
                      ..||.-++| ||+|+++.|.+   +..++++++++|||+||++.++|+.+.++.+|+....++..+...++....+. ..
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk---~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGK---DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CCCcccccCcchhhHHHHhcc---CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            567877765 99999999854   56677999999999999999999999999999999999966533333222111 11


Q ss_pred             eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHH-HHHhhccCCccchhhHHHHHHHHhh
Q 036686          110 RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKR-LNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      ...||.   ++....++...-.+.+.+ ...+...+++++.+.+.+++.+.++. +.+    .+....+...++.+++.+
T Consensus       108 ~~vFg~---~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~----s~~~d~l~~~~~~ii~tA  179 (486)
T KOG0684|consen  108 TPVFGK---GVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE----SGETDGLYTFCRLIIFTA  179 (486)
T ss_pred             hhhcCC---CccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc----ccchhHhhhhhHHHhhhh
Confidence            122332   344444566677776644 66788899999999999999988887 333    266777899999999999


Q ss_pred             hhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCC
Q 036686          189 LICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPN  268 (508)
Q Consensus       189 ~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  268 (508)
                      .-.++||...... .++....+.++...+. .+...||.  .++....++..++++++.+.+...+.++++..++.    
T Consensus       180 s~~ll~~e~r~~~-d~~~a~l~~dLd~~F~-~~d~~FP~--~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~~----  251 (486)
T KOG0684|consen  180 SRLLLGGEVRDQL-DADVAKLYHDLDQGFQ-PFDFLFPY--NLPIPLLRRRDRARKKISKIFSKIILDRRASISKW----  251 (486)
T ss_pred             HHHhhhhhhhhhh-cchHHHHHHHHhcccc-chHhhccc--CCCcchhhhHHHHHHHHHHHHHHHHHHHHhccccc----
Confidence            8888888765432 1233334444433332 22233442  11123355566888889999998888888754211    


Q ss_pred             CCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC
Q 036686          269 SESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKD  348 (508)
Q Consensus       269 ~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~  348 (508)
                            .   .+++..+++ ...+....+++|++..++.++|||+.||++|.+|++++|++||++++.+++|+++++|++
T Consensus       252 ------~---~dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~  321 (486)
T KOG0684|consen  252 ------D---NDMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEK  321 (486)
T ss_pred             ------c---HHHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcc
Confidence                  1   178888877 223334799999999999999999999999999999999999999999999999999987


Q ss_pred             CC-CCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCC----eeeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 036686          349 GL-VKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG----YSIPAGVHVEFYTAWLTEDPDMWSDPGEFRP  423 (508)
Q Consensus       349 ~~-~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  423 (508)
                      .. +++|.++++|+|++||+|||||+||.+. +.|.+.+|.++.+    |.||+|..|.++++.+|+||++|+||+.|+|
T Consensus       322 ~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~  400 (486)
T KOG0684|consen  322 KEKLTYDQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKP  400 (486)
T ss_pred             CCCCCHHHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCCh
Confidence            65 9999999999999999999999998887 4699999999855    9999999999999999999999999999999


Q ss_pred             CcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeE
Q 036686          424 ERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKA  503 (508)
Q Consensus       424 ~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  503 (508)
                      +||+++++++.+...+-...++|||+|.|.|||+.||.+|++.++..+|+.|++++.++. .+......+++.|.++++|
T Consensus       401 dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~-~P~~d~s~~v~~P~g~v~i  479 (486)
T KOG0684|consen  401 DRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGP-FPEVDYSRMVMQPEGDVRI  479 (486)
T ss_pred             hhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCC-CCCCCHHHhhcCCCCCceE
Confidence            999988765433222334567999999999999999999999999999999999999973 3334455668888999999


Q ss_pred             EeecC
Q 036686          504 VILPR  508 (508)
Q Consensus       504 ~~~~r  508 (508)
                      +.++|
T Consensus       480 rYK~R  484 (486)
T KOG0684|consen  480 RYKRR  484 (486)
T ss_pred             EEeec
Confidence            99987


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.4e-70  Score=529.87  Aligned_cols=459  Identities=18%  Similarity=0.281  Sum_probs=350.1

Q ss_pred             CCCCCCccccchhhhhhhc--CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEE
Q 036686           35 PGPRGWPLVGNLVQVILQR--RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLV  112 (508)
Q Consensus        35 pgP~~~p~~G~~~~~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~  112 (508)
                      .|-.|||++|..+.+..+.  +.++..+.+|+++||+++++++|+.+.++++||+.+++|+.+.+..|.+++........
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~   94 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL   94 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH
Confidence            5678999999999986543  67888999999999999999999999999999999999998766777765432211111


Q ss_pred             eecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhh-HHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhh
Q 036686          113 FSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSW-IRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILIC  191 (508)
Q Consensus       113 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~  191 (508)
                      +  + .++.. .+|+.|+++|+.+ .+.|+..++..+.+ .+.+.++.+++.+.+.... ++++|+.++++.+++++++.
T Consensus        95 ~--~-~~i~~-~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~-g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         95 F--G-SGFAI-AEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALS-GEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             h--c-Ccccc-CCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCceeHHHHHHHHHHHHHHH
Confidence            2  2 23433 4799999999965 77888888877644 6788889999999765433 66899999999999999999


Q ss_pred             hhcccccchHHH-HHHHHHHHHHHHhcCCCcccccccch-hh---hHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCC
Q 036686          192 LCFGAKISEERI-KHIESILKDVMLITSPQLPDFLPILT-PL---FRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQN  266 (508)
Q Consensus       192 ~~fg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~l~-~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (508)
                      ++||.+++.... ..+..................+|++. ++   ..+..++..++.+.+.+++.+.++++++..+....
T Consensus       169 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~  248 (489)
T PLN02936        169 SVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGE  248 (489)
T ss_pred             HHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999999853211 11222222222111111111233221 10   11123456677788888888888877765431111


Q ss_pred             CCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhc
Q 036686          267 PNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG  346 (508)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~  346 (508)
                      .....+.......++++.+++...    .++++++.++++++++||+|||+++++|++++|++||++|+++|+|++++++
T Consensus       249 ~~~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~  324 (489)
T PLN02936        249 VIEGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQ  324 (489)
T ss_pred             ccccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc
Confidence            100000000001278998886532    4889999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcc
Q 036686          347 KDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERF  426 (508)
Q Consensus       347 ~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~  426 (508)
                      . +.++++++++||||+|||+||||++|+++...+|.+.+|+.++||.||+||.|+++.+++||||++|+||++|+||||
T Consensus       325 ~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRw  403 (489)
T PLN02936        325 G-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERF  403 (489)
T ss_pred             C-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcccc
Confidence            5 457889999999999999999999999998887877788888999999999999999999999999999999999999


Q ss_pred             cCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEee
Q 036686          427 LEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVIL  506 (508)
Q Consensus       427 l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  506 (508)
                      +.++.....  ......|+|||.|+|.|+|++||++|+++++++|+++|+++++++...  ....++++.++.+++|+++
T Consensus       404 l~~~~~~~~--~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~  479 (489)
T PLN02936        404 DLDGPVPNE--TNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDI--VMTTGATIHTTNGLYMTVS  479 (489)
T ss_pred             CCCCCCccc--cCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCcc--ceecceEEeeCCCeEEEEE
Confidence            975421110  112458999999999999999999999999999999999999876432  2234567778899999999


Q ss_pred             cC
Q 036686          507 PR  508 (508)
Q Consensus       507 ~r  508 (508)
                      ||
T Consensus       480 ~R  481 (489)
T PLN02936        480 RR  481 (489)
T ss_pred             ee
Confidence            87


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.3e-66  Score=499.91  Aligned_cols=435  Identities=18%  Similarity=0.221  Sum_probs=326.7

Q ss_pred             CccccchhhhhhhcCchHHHHHHHHHHhC-CeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC-ceEEeecCc
Q 036686           40 WPLVGNLVQVILQRRHFIFIVRDLRKKYG-PIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP-IRLVFSVGK  117 (508)
Q Consensus        40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~  117 (508)
                      .++.|++...+.   +...++..+.++++ .+++++.++.  ++++||+.+++++.++...|.+...... ....++  .
T Consensus        49 ~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g--~  121 (502)
T PLN02426         49 AYLTASWAKDFD---NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG--R  121 (502)
T ss_pred             CCccHHHHHhcc---cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC--C
Confidence            447787766432   34555666777877 5778776554  8999999999999876667765433221 112222  2


Q ss_pred             cceeeCCCChhHHHHHHHhHhhhcChhhhhhhh--hHHHHHHHHHHHHHHHhhcc-CCccchhhHHHHHHHHhhhhhhhc
Q 036686          118 CAINSAEYGPLWRSLRRNFVTELITPTRVKQCS--WIRTWAMESHMKRLNSEAFD-NDLFVEVMSSCRLTICSILICLCF  194 (508)
Q Consensus       118 ~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~~~~~l~~~~~~-~~~~vdl~~~~~~~~~~~~~~~~f  194 (508)
                       ++.+. +|+.|+.+||.+ .+.|+...++.+.  ..+.+..+.+++.+.+..+. .+.++|+.++++.+++|+++.++|
T Consensus       122 -gi~~~-~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  198 (502)
T PLN02426        122 -GIFNV-DGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSF  198 (502)
T ss_pred             -ceeec-CcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHh
Confidence             44443 799999999965 7899988888763  56677777788887654322 246799999999999999999999


Q ss_pred             ccccchHH----HHHHHHHHHHHHHhcCCCcccccccch---hhh-HhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCC
Q 036686          195 GAKISEER----IKHIESILKDVMLITSPQLPDFLPILT---PLF-RRQMREAKELRKRQMECLVPLIRNRKAFVEKGQN  266 (508)
Q Consensus       195 g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~l~---~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (508)
                      |.+++...    ...+.+.+..+...........+|++.   ..+ .+..++..++.+.+.+++.+.++++++..     
T Consensus       199 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~-----  273 (502)
T PLN02426        199 GLDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG-----  273 (502)
T ss_pred             CCCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence            99874221    122333333322111100111122211   111 12235666777888888888888876531     


Q ss_pred             CCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhc
Q 036686          267 PNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG  346 (508)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~  346 (508)
                         .  ....   |+++.+++..      .+++++.++++++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       274 ---~--~~~~---dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~  339 (502)
T PLN02426        274 ---F--SASK---DLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMG  339 (502)
T ss_pred             ---c--CCcc---hHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhC
Confidence               0  1122   8999998753      368899999999999999999999999999999999999999999999987


Q ss_pred             CCC-CCCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc-CCeeeCCCCEEEEcccccccCCCCC-CCCCCCCC
Q 036686          347 KDG-LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL-GGYSIPAGVHVEFYTAWLTEDPDMW-SDPGEFRP  423 (508)
Q Consensus       347 ~~~-~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p  423 (508)
                      ++. .++++++++||||+|||+|+|||+||++.. .|.+.+|.++ +|+.|||||.|.++.+++||||++| +||++|+|
T Consensus       340 ~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~P  418 (502)
T PLN02426        340 PNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKP  418 (502)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCc
Confidence            643 689999999999999999999999999985 5888888777 9999999999999999999999999 99999999


Q ss_pred             CcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeE
Q 036686          424 ERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKA  503 (508)
Q Consensus       424 ~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  503 (508)
                      |||++++..    ....+..|+|||+|+|.|+|++||++|++++++.|+++|+++++++.........+.++.++++++|
T Consensus       419 eRwl~~~~~----~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v  494 (502)
T PLN02426        419 ERWLKNGVF----VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPV  494 (502)
T ss_pred             cccCCCCCc----CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEE
Confidence            999974210    1123467999999999999999999999999999999999998754322223345678899999999


Q ss_pred             EeecC
Q 036686          504 VILPR  508 (508)
Q Consensus       504 ~~~~r  508 (508)
                      ++++|
T Consensus       495 ~~~~r  499 (502)
T PLN02426        495 RVRER  499 (502)
T ss_pred             EEEEc
Confidence            99987


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.7e-60  Score=453.17  Aligned_cols=415  Identities=18%  Similarity=0.187  Sum_probs=296.4

Q ss_pred             CCCCCCCCCCCCCccccchhhhhh--hcCchHHHHHHHHHHhCC-eEEEEcCCeeE-------EEeCCHHHHHHHHHh--
Q 036686           28 GGPKNLPPGPRGWPLVGNLVQVIL--QRRHFIFIVRDLRKKYGP-IFTMQMGQRTV-------VIVTSSQLIHEALVQ--   95 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------vvv~~p~~~~~il~~--   95 (508)
                      ..|.+.|||+.|||++|++++++.  ...+...++.+.++|||+ ||++.++|.|.       |+++||+.++.+|.+  
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~   92 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSK   92 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchh
Confidence            457778999999999999998765  344556779999999999 99999998665       999999999999964  


Q ss_pred             --cCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCc
Q 036686           96 --RGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDL  173 (508)
Q Consensus        96 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~  173 (508)
                        +...|..... .... ++|..........+|+.|+++|+.+ .++|+ ..++.+.+.+.+.+..++++|...... +.
T Consensus        93 ~~~~~~~~~~~~-~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~-~~  167 (480)
T PLN02648         93 VDKRDVFTGTYM-PSTA-FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAK-KG  167 (480)
T ss_pred             ccccccceeeec-cCcc-ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhh-CC
Confidence              4433443222 2222 4442111133345799999999855 67888 467889999999999999999654222 45


Q ss_pred             cchhhHHHHHHHHhhhhhhhcccccchHHH-HHHHHHHHHHHHhcCCCcccccccchhhhHhHHHH------------HH
Q 036686          174 FVEVMSSCRLTICSILICLCFGAKISEERI-KHIESILKDVMLITSPQLPDFLPILTPLFRRQMRE------------AK  240 (508)
Q Consensus       174 ~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~------------~~  240 (508)
                      .+|+.+.++.+++++++.++||.+.+.+.. +.+...........      .+|............            ..
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~~~~~l~~~~~~~~~~~~~~~------~~p~~~~~l~~~~~~~i~~~~~~~~~~~~  241 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDPSETALGSDGPALIQKWLALQ------LAPLASTGLPHVLEELLLHTFPLPFFLVK  241 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCcchhhhccchhHHHHHHHHHH------hhHHHHcCchHHHHHHhhcccCCchhhhh
Confidence            699999999999999999999987654211 11111121111100      011100000000000            00


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHH-HHHcCchhHHHH
Q 036686          241 ELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSE-VISAGTDTSATT  319 (508)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~-~~~AG~~tt~~~  319 (508)
                      ...+++.+++.                            +.++.+++...+  .+++++|++++++. +.++|++|++++
T Consensus       242 ~~~~~~~~~~~----------------------------~~~~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~  291 (480)
T PLN02648        242 SDYDKLYDFFR----------------------------ASATEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIF  291 (480)
T ss_pred             ccHHHHHHHHH----------------------------HHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHH
Confidence            11111111111                            111223322211  25999999999875 457778888899


Q ss_pred             HHHHHHHHhhChH-HHHHHHHHHHHHhcC-CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccC----Ce
Q 036686          320 AEWAMHHLVLNQE-IQEKLYKEIVAAVGK-DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELG----GY  393 (508)
Q Consensus       320 l~~~l~~L~~~P~-~~~~lr~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~----g~  393 (508)
                      ++|++++|++||+ +|+++++|++++++. ++.++++++++||||++||+|+||++|+++.. .|.+.+|++++    ||
T Consensus       292 l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~  370 (480)
T PLN02648        292 FPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAF  370 (480)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceE
Confidence            9999999999995 999999999999863 45689999999999999999999999999985 57788999995    79


Q ss_pred             eeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCcc--ccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHH
Q 036686          394 SIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVD--VTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARM  471 (508)
Q Consensus       394 ~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~l  471 (508)
                      .||||+.|+++.+.+||||++|+||++|||+||++++.+...  ..........+||+|+|.|+|++||++|+++++++|
T Consensus       371 ~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~L  450 (480)
T PLN02648        371 EIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAEL  450 (480)
T ss_pred             EECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999875331100  000001122334788899999999999999999999


Q ss_pred             HHhce-eecCCCCC
Q 036686          472 VHAYK-WLPVPGAP  484 (508)
Q Consensus       472 l~~~~-~~~~~~~~  484 (508)
                      +++|+ +++.++..
T Consensus       451 l~~f~~~~l~~~~~  464 (480)
T PLN02648        451 FLRYDSFEIEVDTS  464 (480)
T ss_pred             HHHhCEEeecCCcc
Confidence            99998 99877553


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.1e-53  Score=402.26  Aligned_cols=379  Identities=24%  Similarity=0.331  Sum_probs=294.6

Q ss_pred             HHHHHHHHhCCeEEEEcCCee--EEEeCCHHHHHHHHHhcCCCcCCCCCCCCceE-E-eecCccceeeCCCChhHHHHHH
Q 036686           59 IVRDLRKKYGPIFTMQMGQRT--VVIVTSSQLIHEALVQRGPEFASRPPDSPIRL-V-FSVGKCAINSAEYGPLWRSLRR  134 (508)
Q Consensus        59 ~~~~~~~~yG~v~~~~~~~~~--~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~w~~~R~  134 (508)
                      ....+.+.||.++++...+..  .+++++++++++++.++. .+++......... . -..+... ....+|+.|.++||
T Consensus        27 ~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-ll~~dg~~H~r~Rk  104 (411)
T COG2124          27 FLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGS-LLTLDGPEHTRLRK  104 (411)
T ss_pred             hHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccc-eeecCCHHHHHHHH
Confidence            356677788888888775554  899999999999997753 2222221111110 1 1112222 33348999999998


Q ss_pred             HhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHH
Q 036686          135 NFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVM  214 (508)
Q Consensus       135 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~  214 (508)
                      . +.+.|++..++.+.+.+.+.+.++++.+ ..    +...++.+....+++++++ .+||.+.++.  ...........
T Consensus       105 l-~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~----~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~--~~~~~~~~~~~  175 (411)
T COG2124         105 L-LAPAFTPRALRGYRPLIREIADRLLDDL-WQ----GGADLVLDFAAELTLRVIA-ELLGVPLEDR--PQLLRWSDALL  175 (411)
T ss_pred             H-hccccCHHHHHHHHHHHHHHHHHHHHhc-cc----CCchhHHHHhhhhhHHHHH-HHhCCCHHHH--HHHHHHHHHHH
Confidence            5 5789999999999999999999999988 31    3577889999999999999 9999986543  22333333222


Q ss_pred             HhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCC
Q 036686          215 LITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGRE  294 (508)
Q Consensus       215 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  294 (508)
                      ....       |...  ......+..++...+.+++..+|++++...         .    .   |+++.++....++.+
T Consensus       176 ~~~~-------~~~~--~~~~~~~~~~a~~~~~~~~~~li~~rR~~~---------~----~---dlls~l~~a~~~~~~  230 (411)
T COG2124         176 LRLD-------PDLG--PEEPWRRARAARRELDAYLRALIAERRAAP---------R----D---DLLSLLLSAEDDGGG  230 (411)
T ss_pred             hccC-------cccC--CcccHHHHHHHHHHHHHHHHHHHHHhccCC---------c----c---cHHHHHHHHhhCCCC
Confidence            2210       1111  112255677888899999999999888422         1    1   899999987765544


Q ss_pred             CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCC
Q 036686          295 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHP  374 (508)
Q Consensus       295 ~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p  374 (508)
                      .+|++|+.++++++++||+|||+++++|+++.|++||+.++++++|.+.                ||++++|+|+||++|
T Consensus       231 ~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~p  294 (411)
T COG2124         231 RLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYP  294 (411)
T ss_pred             cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCC
Confidence            6999999999999999999999999999999999999999999998665                899999999999999


Q ss_pred             CCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCC
Q 036686          375 PGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRIC  454 (508)
Q Consensus       375 ~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C  454 (508)
                      |++. ++|.+++|++++|+.||||+.|+++.+++||||++|++|++|||+||.              ..|+|||+|+|.|
T Consensus       295 pv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------------~~~l~FG~G~H~C  359 (411)
T COG2124         295 PVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN--------------NAHLPFGGGPHRC  359 (411)
T ss_pred             chhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC--------------CCCcCCCCCCccc
Confidence            9998 899999999999999999999999999999999999999999999985              4599999999999


Q ss_pred             CChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          455 PAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       455 ~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                      +|.+||++|++++++.++++|++....+ . + ......+..+..+..+.++.
T Consensus       360 lG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~-~~~~~~~~~~~g~~~l~v~~  409 (411)
T COG2124         360 LGAALARLELKVALAELLRRFPLLLLAE-P-P-PLVRRPTLVPRGGERLPVRR  409 (411)
T ss_pred             cCHHHHHHHHHHHHHHHHHhCchhhcCC-C-C-CccccccccCCCcceeeeec
Confidence            9999999999999999999999977765 2 2 22223344445555555554


No 33 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=64.72  E-value=5.8  Score=30.30  Aligned_cols=23  Identities=17%  Similarity=0.325  Sum_probs=17.0

Q ss_pred             CCCCChhHHHHHHHHHHHHHHHh
Q 036686          452 RICPAWSLGILHINLLIARMVHA  474 (508)
Q Consensus       452 r~C~G~~~A~~~~~~~l~~ll~~  474 (508)
                      .+|.|++||+.++-.++++++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999873


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=63.88  E-value=5.4  Score=25.61  Aligned_cols=8  Identities=50%  Similarity=0.899  Sum_probs=6.6

Q ss_pred             CCCcccCC
Q 036686          422 RPERFLEG  429 (508)
Q Consensus       422 ~p~R~l~~  429 (508)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            88899875


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=63.77  E-value=2.1  Score=35.72  Aligned_cols=44  Identities=23%  Similarity=0.261  Sum_probs=33.4

Q ss_pred             CCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEE
Q 036686          358 KMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEF  403 (508)
Q Consensus       358 ~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~  403 (508)
                      .-..+.|||.|+.-+.....  +.=...+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEE
Confidence            45667899999988875543  334466899999999999997643


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=62.16  E-value=34  Score=20.98  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHH
Q 036686          300 EIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEI  341 (508)
Q Consensus       300 ~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei  341 (508)
                      ++...+..++=.|-|..+-.+.--|.+..-||+..+.+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            445556666667777777777777777777899998888776


No 37 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=60.49  E-value=26  Score=23.93  Aligned_cols=27  Identities=15%  Similarity=0.239  Sum_probs=12.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhcCC
Q 036686            1 MDLIDLVILISGFIFLCLWWRYSSTTG   27 (508)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~   27 (508)
                      |.++..+++++.+++++++.+.-.+++
T Consensus         1 Mgl~Da~~~~V~V~IVclliya~YRR~   27 (92)
T PHA02681          1 MGLLDALLTVIVISIVCYIVIMMYRRS   27 (92)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            555555555444444444443333333


No 38 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=53.56  E-value=40  Score=32.34  Aligned_cols=38  Identities=11%  Similarity=0.264  Sum_probs=23.5

Q ss_pred             HhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCC
Q 036686           66 KYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASR  103 (508)
Q Consensus        66 ~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~  103 (508)
                      +||.|++-.+-++.+-|=.=|..-++-+.++...|+..
T Consensus       222 rfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp  259 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP  259 (534)
T ss_pred             ccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhcc
Confidence            68899988887777666444444444454555555543


No 39 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.48  E-value=17  Score=23.17  Aligned_cols=24  Identities=33%  Similarity=0.423  Sum_probs=18.5

Q ss_pred             HHHHHhhChHHHHHHHHHHHHHhc
Q 036686          323 AMHHLVLNQEIQEKLYKEIVAAVG  346 (508)
Q Consensus       323 ~l~~L~~~P~~~~~lr~Ei~~~~~  346 (508)
                      ++.||.+||++.+++.+.=.+.+|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            578999999999999875444443


No 40 
>PF10272 Tmpp129:  Putative transmembrane protein precursor;  InterPro: IPR018801  This entry consists of proteins conserved from worms to humans. They are purported to be transmembrane protein-precursors but their function is unknown. 
Probab=44.22  E-value=51  Score=30.67  Aligned_cols=47  Identities=17%  Similarity=0.290  Sum_probs=32.0

Q ss_pred             CCccccchhhhhhhcCchHHHHHHHHHHhC--CeEEEEcCCeeEEEeCC
Q 036686           39 GWPLVGNLVQVILQRRHFIFIVRDLRKKYG--PIFTMQMGQRTVVIVTS   85 (508)
Q Consensus        39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG--~v~~~~~~~~~~vvv~~   85 (508)
                      .+|+.-++..+...+.++.....+.-.+|.  +-|.+..++..-++|+|
T Consensus       108 ~HPi~k~L~~y~~~~~~W~~VAs~IN~EfRriDKf~i~~~~~srvivTd  156 (358)
T PF10272_consen  108 NHPIAKNLKKYSNPNSDWRAVASSINTEFRRIDKFVIGLNGISRVIVTD  156 (358)
T ss_pred             cChHHHHHHHhcCCCCcHHHHHHHHHHHhcCCCEEEecCCCceEEEEeC
Confidence            367777766665555678888888888886  45666667745555553


No 41 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=41.47  E-value=6.8  Score=36.79  Aligned_cols=44  Identities=18%  Similarity=0.154  Sum_probs=33.2

Q ss_pred             CCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEE
Q 036686          358 KMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEF  403 (508)
Q Consensus       358 ~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~  403 (508)
                      .-..+.|||.|+.=+.....  +.=...+|+.++|..|||||.|.-
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~--vrlRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSA--VKLRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCCceEEEEcCceEEecCCE--EEEEEcCceeeCCEEecCCCEEEE
Confidence            45678899999988875432  334466899999999999997643


No 42 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=40.79  E-value=13  Score=23.11  Aligned_cols=11  Identities=45%  Similarity=0.930  Sum_probs=9.4

Q ss_pred             ccCCCCCCCCC
Q 036686          445 VPFGAGRRICP  455 (508)
Q Consensus       445 ~~Fg~G~r~C~  455 (508)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999985


No 43 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=40.03  E-value=58  Score=22.93  Aligned_cols=18  Identities=33%  Similarity=0.512  Sum_probs=15.6

Q ss_pred             ChHHHHHHHHHHHHHhcC
Q 036686          330 NQEIQEKLYKEIVAAVGK  347 (508)
Q Consensus       330 ~P~~~~~lr~Ei~~~~~~  347 (508)
                      .|++.+.+|+||-+|+..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            389999999999998754


No 44 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=38.35  E-value=47  Score=32.59  Aligned_cols=41  Identities=17%  Similarity=0.162  Sum_probs=25.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCc
Q 036686            1 MDLIDLVILISGFIFLCLWWRYSSTTGGGPKNLPPGPRGWP   41 (508)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p   41 (508)
                      |+....+..+++.+++++++..+......+.+..|+|++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~   41 (463)
T PLN02196          1 MDFSALFLTLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTM   41 (463)
T ss_pred             CchHhhhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Confidence            56666665555555554444444444568888888888654


No 45 
>PHA03049 IMV membrane protein; Provisional
Probab=34.47  E-value=1.4e+02  Score=19.70  Aligned_cols=30  Identities=13%  Similarity=0.202  Sum_probs=12.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Q 036686            8 ILISGFIFLCLWWRYSSTTGGGPKNLPPGPR   38 (508)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~   38 (508)
                      ++++++++.+++|-.+. ++......||.|.
T Consensus         8 ~iICVaIi~lIvYgiYn-kk~~~q~~~p~~e   37 (68)
T PHA03049          8 VIICVVIIGLIVYGIYN-KKTTTSQNPPSQE   37 (68)
T ss_pred             HHHHHHHHHHHHHHHHh-cccccCCCCCChh
Confidence            33444444444444433 3333444455443


No 46 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=33.91  E-value=26  Score=24.51  Aligned_cols=20  Identities=25%  Similarity=0.662  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHHHhceeecCC
Q 036686          462 LHINLLIARMVHAYKWLPVP  481 (508)
Q Consensus       462 ~~~~~~l~~ll~~~~~~~~~  481 (508)
                      .-|+-+|..+|+-|||.+++
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            35889999999999999986


No 47 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=32.94  E-value=1.8e+02  Score=20.56  Aligned_cols=50  Identities=14%  Similarity=0.131  Sum_probs=41.9

Q ss_pred             CCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 036686          296 LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAV  345 (508)
Q Consensus       296 l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~  345 (508)
                      .+.+.........++-=+..++....-.+.+-++||+..+++.+++..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34555666667788999999999999999999999999999999988754


No 48 
>PF15050 SCIMP:  SCIMP protein
Probab=30.91  E-value=1.5e+02  Score=22.26  Aligned_cols=18  Identities=39%  Similarity=0.645  Sum_probs=11.0

Q ss_pred             CCCCCCCCCC-CCccccch
Q 036686           29 GPKNLPPGPR-GWPLVGNL   46 (508)
Q Consensus        29 ~~~~~ppgP~-~~p~~G~~   46 (508)
                      .+.+.||.|+ +.++.|+.
T Consensus        65 ~~~~LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   65 SPVQLPPLPPRGSPSPEDS   83 (133)
T ss_pred             CcCCCCCCCCCCCCCcccc
Confidence            3555666654 56777754


No 49 
>PF15206 FAM209:  FAM209 family
Probab=30.54  E-value=48  Score=25.51  Aligned_cols=33  Identities=18%  Similarity=0.367  Sum_probs=18.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccc
Q 036686           11 SGFIFLCLWWRYSSTTGGGPKNLPPGPRGWPLV   43 (508)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~   43 (508)
                      +.+++++.+..++....+..-..|||..++|+-
T Consensus        45 ~Fvv~lyvilKf~g~~~K~keq~p~glrg~~fr   77 (150)
T PF15206_consen   45 LFVVVLYVILKFRGDSEKNKEQSPPGLRGCSFR   77 (150)
T ss_pred             HHHHHHHheeEeccCcccccccCCCccCcccCC
Confidence            333333333444444445566778888888774


No 50 
>PRK06789 flagellar motor switch protein; Validated
Probab=28.86  E-value=58  Score=22.23  Aligned_cols=41  Identities=12%  Similarity=0.084  Sum_probs=31.0

Q ss_pred             HHHhhhcCCCCCCccccccccccc--ccCCeeeCCCCEEEEcc
Q 036686          365 VVKETLRRHPPGHFLLSHAAIKDT--ELGGYSIPAGVHVEFYT  405 (508)
Q Consensus       365 ~i~E~lRl~p~~~~~~~R~~~~d~--~~~g~~ip~G~~v~~~~  405 (508)
                      -++|-+.|.+..-.-+-|.+.+++  .++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            367888898877666667776654  45999999999887753


No 51 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=28.58  E-value=1.8e+02  Score=19.28  Aligned_cols=16  Identities=19%  Similarity=0.148  Sum_probs=6.5

Q ss_pred             HHHHHHHHHHHHHHHH
Q 036686            8 ILISGFIFLCLWWRYS   23 (508)
Q Consensus         8 ~~~~~~~~~~~~~~~~   23 (508)
                      ++++++++.+++|-.+
T Consensus         8 i~ICVaii~lIlY~iY   23 (68)
T PF05961_consen    8 IIICVAIIGLILYGIY   23 (68)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3333444444444333


No 52 
>PHA02902 putative IMV membrane protein; Provisional
Probab=28.22  E-value=1.5e+02  Score=19.36  Aligned_cols=6  Identities=17%  Similarity=0.711  Sum_probs=2.8

Q ss_pred             HHHHHH
Q 036686           60 VRDLRK   65 (508)
Q Consensus        60 ~~~~~~   65 (508)
                      .+.+|+
T Consensus        59 irAlHr   64 (70)
T PHA02902         59 IKALHR   64 (70)
T ss_pred             HHHHHH
Confidence            444444


No 53 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=27.80  E-value=1.6e+02  Score=22.76  Aligned_cols=40  Identities=15%  Similarity=0.280  Sum_probs=30.6

Q ss_pred             CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHh
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQ   95 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~   95 (508)
                      .+....+.+|.++||.+--.  .+...+.+.|++.++++...
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~  113 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD  113 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence            35666799999999988432  25677889999999999844


No 54 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=27.50  E-value=1.6e+02  Score=20.99  Aligned_cols=18  Identities=11%  Similarity=0.394  Sum_probs=15.5

Q ss_pred             ChHHHHHHHHHHHHHhcC
Q 036686          330 NQEIQEKLYKEIVAAVGK  347 (508)
Q Consensus       330 ~P~~~~~lr~Ei~~~~~~  347 (508)
                      .|+.++.+++||-+|+..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            599999999999998754


No 55 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=26.38  E-value=1.8e+02  Score=24.18  Aligned_cols=62  Identities=16%  Similarity=0.124  Sum_probs=37.5

Q ss_pred             cCchhHHHHHHHHHHHHhhChHHHH----------HHHHHHHHHhcCCCCCCc--ccccCCchHHHHHHhhhcC
Q 036686          311 AGTDTSATTAEWAMHHLVLNQEIQE----------KLYKEIVAAVGKDGLVKE--EDVEKMPYLDAVVKETLRR  372 (508)
Q Consensus       311 AG~~tt~~~l~~~l~~L~~~P~~~~----------~lr~Ei~~~~~~~~~~~~--~~~~~l~~l~a~i~E~lRl  372 (508)
                      ||..||+-+.--++-.+--++.+.+          ..+.+|.+.-..++.+++  .+.++++.|+.++.|--|-
T Consensus        16 AGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~GrhisyFgpeANdf~~LE~~f~eYg~~   89 (289)
T COG3954          16 AGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQS   89 (289)
T ss_pred             CCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHcCCcceecCccccchHHHHHHHHHhccc
Confidence            6677776666666666655554442          233333333333444554  4568899999999996654


No 56 
>PF15080 DUF4547:  Domain of unknown function (DUF4547)
Probab=26.12  E-value=3.4e+02  Score=21.71  Aligned_cols=50  Identities=22%  Similarity=0.451  Sum_probs=39.1

Q ss_pred             CCCHHHHHHHHHHHHHcCchhHH----------HHHHHHHHHHhhChHHHHHHHHHHHHH
Q 036686          295 QLGEQEIVTLCSEVISAGTDTSA----------TTAEWAMHHLVLNQEIQEKLYKEIVAA  344 (508)
Q Consensus       295 ~l~~~~i~~~~~~~~~AG~~tt~----------~~l~~~l~~L~~~P~~~~~lr~Ei~~~  344 (508)
                      ++.+.++.+.|..|+..|+..--          .-+++++-.+..|+..|+-+..-+...
T Consensus       112 GLqE~dv~aLCtFfiahgnkaehy~a~~R~~yi~dv~~mItnmVkNqalq~~llrAvqvi  171 (196)
T PF15080_consen  112 GLQEGDVTALCTFFIAHGNKAEHYAAKVRQMYIRDVTFMITNMVKNQALQDGLLRAVQVI  171 (196)
T ss_pred             CCCcccHHHHHHHHHHhcchHhHhHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            68889999999999998876532          235788899999999999887665543


No 57 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=25.77  E-value=72  Score=20.11  Aligned_cols=17  Identities=12%  Similarity=0.415  Sum_probs=14.9

Q ss_pred             CCeEEEEcCCeeEEEeC
Q 036686           68 GPIFTMQMGQRTVVIVT   84 (508)
Q Consensus        68 G~v~~~~~~~~~~vvv~   84 (508)
                      |++++++-||+.++|..
T Consensus         4 GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    4 GDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCEEEEccCCCCeEEEE
Confidence            89999999999888874


No 58 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=25.56  E-value=2.8e+02  Score=20.48  Aligned_cols=59  Identities=25%  Similarity=0.233  Sum_probs=38.0

Q ss_pred             CCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcC------CeeEEEeCCHHHHHHHH
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMG------QRTVVIVTSSQLIHEAL   93 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~vvv~~p~~~~~il   93 (508)
                      +.+.||--..+-++.|+..-+     -.+.+-++.-+||+|.++.+|      |.-+||-.|-.+++...
T Consensus        10 ~~rlppevnriLyirNLp~~I-----TseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~   74 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPFKI-----TSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKAC   74 (124)
T ss_pred             CCCCChhhheeEEEecCCccc-----cHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHH
Confidence            344555555566666654422     223466778899999999987      45567767777666655


No 59 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=24.40  E-value=1.5e+02  Score=17.08  Aligned_cols=17  Identities=24%  Similarity=0.387  Sum_probs=11.5

Q ss_pred             HHHHHh-hChHHHHHHHH
Q 036686          323 AMHHLV-LNQEIQEKLYK  339 (508)
Q Consensus       323 ~l~~L~-~~P~~~~~lr~  339 (508)
                      ++..++ +||++++.++.
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            344444 79999888764


No 60 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=23.21  E-value=1.1e+02  Score=24.54  Aligned_cols=38  Identities=21%  Similarity=0.324  Sum_probs=28.7

Q ss_pred             cCchHHHHHHHHHHhC-CeEEEEcCCe-e---EEEeCCHHHHH
Q 036686           53 RRHFIFIVRDLRKKYG-PIFTMQMGQR-T---VVIVTSSQLIH   90 (508)
Q Consensus        53 ~~~~~~~~~~~~~~yG-~v~~~~~~~~-~---~vvv~~p~~~~   90 (508)
                      ++...+..+++++++| +|+++.++|. |   -++|+||-..-
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG  195 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG  195 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence            4567777899999999 8999998663 2   26788886544


No 61 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=23.10  E-value=46  Score=28.09  Aligned_cols=23  Identities=39%  Similarity=0.777  Sum_probs=19.1

Q ss_pred             Eccccc-ccCCCCCCCCCCCCCCc
Q 036686          403 FYTAWL-TEDPDMWSDPGEFRPER  425 (508)
Q Consensus       403 ~~~~~~-~~d~~~~~~p~~F~p~R  425 (508)
                      ++.|.- +.|+.+|.|...|+|.|
T Consensus       188 iPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  188 IPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCCCcccccCccccCCCC
Confidence            344544 89999999999999988


No 62 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=22.53  E-value=44  Score=22.06  Aligned_cols=16  Identities=19%  Similarity=0.511  Sum_probs=12.9

Q ss_pred             CCchHHHHHHhhhcCC
Q 036686          358 KMPYLDAVVKETLRRH  373 (508)
Q Consensus       358 ~l~~l~a~i~E~lRl~  373 (508)
                      +..+++.+|+|++|+.
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3458899999999964


No 63 
>PRK13664 hypothetical protein; Provisional
Probab=21.95  E-value=1.6e+02  Score=18.73  Aligned_cols=7  Identities=43%  Similarity=0.529  Sum_probs=3.2

Q ss_pred             CCCCCCC
Q 036686           32 NLPPGPR   38 (508)
Q Consensus        32 ~~ppgP~   38 (508)
                      +.|+.|+
T Consensus        38 nkp~LPP   44 (62)
T PRK13664         38 NKPELPP   44 (62)
T ss_pred             CCCCCCC
Confidence            3445444


No 64 
>PRK13988 cell division topological specificity factor MinE; Provisional
Probab=21.87  E-value=2.5e+02  Score=20.49  Aligned_cols=18  Identities=33%  Similarity=0.573  Sum_probs=15.6

Q ss_pred             ChHHHHHHHHHHHHHhcC
Q 036686          330 NQEIQEKLYKEIVAAVGK  347 (508)
Q Consensus       330 ~P~~~~~lr~Ei~~~~~~  347 (508)
                      .|+..+.+++||-.++..
T Consensus        37 sp~~l~~mk~dIl~VIsk   54 (97)
T PRK13988         37 SPELLEQMRKEILEVVAR   54 (97)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            489999999999998754


No 65 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=21.86  E-value=2.7e+02  Score=20.73  Aligned_cols=10  Identities=40%  Similarity=0.361  Sum_probs=5.7

Q ss_pred             CCccccchhh
Q 036686           39 GWPLVGNLVQ   48 (508)
Q Consensus        39 ~~p~~G~~~~   48 (508)
                      .-|+.||+-.
T Consensus        45 ~~p~YgNL~~   54 (107)
T PF15330_consen   45 DDPCYGNLEL   54 (107)
T ss_pred             CCcccccccc
Confidence            4566676533


No 66 
>PF09105 SelB-wing_1:  Elongation factor SelB, winged helix ;  InterPro: IPR015189 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 1".  The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; PDB: 2V9V_A 1LVA_A 2PLY_A.
Probab=20.92  E-value=1.6e+02  Score=17.75  Aligned_cols=21  Identities=29%  Similarity=0.287  Sum_probs=14.9

Q ss_pred             CCCHHHHHHHHHHHHHcCchh
Q 036686          295 QLGEQEIVTLCSEVISAGTDT  315 (508)
Q Consensus       295 ~l~~~~i~~~~~~~~~AG~~t  315 (508)
                      .++-+|....+-.+..||+-|
T Consensus        28 slsleetrkllqsmaaagqvt   48 (61)
T PF09105_consen   28 SLSLEETRKLLQSMAAAGQVT   48 (61)
T ss_dssp             T--HHHHHHHHHHHHHTTSEE
T ss_pred             hccHHHHHHHHHHHHhcCceE
Confidence            577888888888888888755


No 67 
>PRK13987 cell division topological specificity factor MinE; Provisional
Probab=20.77  E-value=2.2e+02  Score=20.50  Aligned_cols=18  Identities=17%  Similarity=0.444  Sum_probs=15.5

Q ss_pred             ChHHHHHHHHHHHHHhcC
Q 036686          330 NQEIQEKLYKEIVAAVGK  347 (508)
Q Consensus       330 ~P~~~~~lr~Ei~~~~~~  347 (508)
                      .|+..+.+++||-+++..
T Consensus        33 sp~~l~~lk~eIl~VI~k   50 (91)
T PRK13987         33 SPDVLEMIKEDILKVISK   50 (91)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            489999999999998754


No 68 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=20.34  E-value=86  Score=17.17  Aligned_cols=16  Identities=31%  Similarity=0.702  Sum_probs=13.2

Q ss_pred             CCCccccCCCCCCCCC
Q 036686          440 RGVKMVPFGAGRRICP  455 (508)
Q Consensus       440 ~~~~~~~Fg~G~r~C~  455 (508)
                      ....|+|++|..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3568999999999994


Done!