Query         036686
Match_columns 508
No_of_seqs    190 out of 1936
Neff          11.4
Searched_HMMs 29240
Date          Mon Mar 25 07:00:34 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036686.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036686hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3tbg_A Cytochrome P450 2D6; mo 100.0 1.1E-77 3.8E-82  588.3  39.0  457   32-508    10-475 (479)
  2 3k9v_A 1,25-dihydroxyvitamin D 100.0 5.2E-77 1.8E-81  584.1  38.7  454   25-508    17-482 (482)
  3 3swz_A Steroid 17-alpha-hydrox 100.0 4.4E-77 1.5E-81  585.4  38.0  457   30-508     6-478 (494)
  4 3pm0_A Cypib1, cytochrome P450 100.0 2.4E-77 8.3E-82  590.0  32.8  458   29-508     6-483 (507)
  5 3e6i_A CYPIIE1, P450-J, cytoch 100.0   1E-75 3.6E-80  573.7  39.5  453   28-508     6-471 (476)
  6 3s79_A Cytochrome P450 19A1; o 100.0 2.9E-75 9.8E-80  574.4  37.3  447   30-508    43-495 (503)
  7 3qz1_A Steroid 21-hydroxylase; 100.0 1.1E-75 3.8E-80  576.3  33.9  450   22-508    19-483 (496)
  8 2hi4_A Cytochrome P450 1A2; CY 100.0 3.6E-75 1.2E-79  571.1  37.1  458   28-508    12-487 (495)
  9 3ld6_A Lanosterol 14-alpha dem 100.0 1.6E-76 5.5E-81  575.6  25.2  440   32-508    11-453 (461)
 10 1r9o_A Cytochrome P450 2C9; mo 100.0   1E-74 3.5E-79  565.7  37.9  450   32-508    11-473 (477)
 11 2fdv_A Cytochrome P450 2A6; CY 100.0 7.3E-75 2.5E-79  566.3  36.7  450   32-508    10-472 (476)
 12 1po5_A Cytochrome P450 2B4; ox 100.0 9.2E-75 3.2E-79  565.6  37.2  449   32-508    10-472 (476)
 13 3nxu_A Cytochrome P450 3A4; al 100.0 1.1E-75 3.9E-80  574.6  30.8  448   32-508    14-474 (485)
 14 3czh_A Cytochrome P450 2R1; vi 100.0 1.3E-74 4.3E-79  564.7  37.9  455   30-508    10-475 (481)
 15 3n9y_A Cholesterol SIDE-chain  100.0 2.7E-74 9.3E-79  565.1  37.5  457   26-508     3-474 (487)
 16 2ve3_A Putative cytochrome P45 100.0 7.5E-74 2.6E-78  553.4  33.5  436   28-508     8-443 (444)
 17 2cib_A Cytochrome P450 51; hem 100.0 3.2E-73 1.1E-77  550.8  30.0  442   32-508     4-448 (455)
 18 3gw9_A Sterol 14alpha-demethyl 100.0 1.4E-72 4.9E-77  547.6  30.7  439   32-508     3-449 (450)
 19 2ij2_A Cytochrome P450 BM3; mo 100.0 1.5E-71   5E-76  541.1  33.1  442   32-508     3-451 (470)
 20 3dbg_A Putative cytochrome P45 100.0   3E-72   1E-76  546.5  27.7  435   31-506    22-459 (467)
 21 3mdm_A Cholesterol 24-hydroxyl 100.0 1.7E-70   6E-75  533.2  34.7  424   54-508    10-441 (456)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 8.1E-72 2.8E-76  543.2  25.1  441   29-505     8-451 (461)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 9.6E-67 3.3E-71  512.1  19.2  446   29-507    10-484 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 8.2E-67 2.8E-71  511.8  17.4  446   29-507    10-484 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 3.4E-65 1.1E-69  501.6  25.0  447   29-508    15-489 (498)
 26 1izo_A P450bsbeta, cytochrome  100.0 2.7E-63 9.4E-68  475.6  34.4  400   41-508     9-415 (417)
 27 2cd8_A Cytochrome P450 monooxy 100.0 1.7E-63 5.9E-68  477.7  28.4  398   31-508    25-428 (436)
 28 3b98_A Prostaglandin I2 syntha 100.0 3.1E-64 1.1E-68  492.1  20.5  437   29-508    15-470 (475)
 29 1n97_A CYP175A1; electron tran 100.0 7.3E-64 2.5E-68  474.4  20.0  383   36-508     3-386 (389)
 30 1jfb_A Nitric-oxide reductase  100.0 4.4E-62 1.5E-66  465.2  32.1  375   33-482     2-382 (404)
 31 3awm_A Fatty acid alpha-hydrox 100.0 8.3E-62 2.8E-66  465.1  33.1  403   34-508     4-413 (415)
 32 1ued_A P450 OXYC, P450 monooxy 100.0 1.1E-61 3.8E-66  461.5  29.8  386   30-505     8-406 (406)
 33 1cpt_A Cytochrome P450-TERP; o 100.0   3E-61   1E-65  462.1  28.8  408   30-508     4-428 (428)
 34 3aba_A Cytochrome P450; oxidor 100.0 1.1E-59 3.9E-64  447.2  34.0  373   58-508    23-402 (403)
 35 3a4g_A Vitamin D hydroxylase;  100.0 6.7E-60 2.3E-64  449.3  30.5  375   55-508    21-401 (411)
 36 2jjn_A Cytochrome P450 113A1;  100.0 3.2E-60 1.1E-64  452.5  28.3  393   25-508    12-406 (411)
 37 3ejb_B Biotin biosynthesis cyt 100.0 1.1E-59 3.8E-64  448.7  32.1  378   55-508    14-396 (404)
 38 2zbx_A Cytochrome P450-SU1; be 100.0 3.1E-59 1.1E-63  445.5  34.5  392   31-505     4-406 (412)
 39 4fb2_A P450CIN; heme, monooxyg 100.0 6.9E-60 2.4E-64  448.6  28.7  371   54-508    19-393 (398)
 40 2zwu_A Camphor 5-monooxygenase 100.0 3.9E-60 1.3E-64  451.1  26.8  395   28-508     7-410 (415)
 41 1s1f_A Putative cytochrome P45 100.0 8.2E-60 2.8E-64  448.7  29.0  388   32-506     8-405 (406)
 42 3dsk_A Cytochrome P450 74A, ch 100.0 6.3E-61 2.2E-65  470.8  20.3  426   26-483    22-473 (495)
 43 1odo_A Putative cytochrome P45 100.0   3E-59   1E-63  445.4  29.5  379   54-507    15-407 (408)
 44 3dan_A Cytochrome P450 74A2; A 100.0   6E-60 2.1E-64  461.6  25.1  423   28-486     5-458 (473)
 45 2dkk_A Cytochrome P450; CYP158 100.0   8E-60 2.7E-64  448.3  24.9  376   53-508    26-410 (411)
 46 2xkr_A CYP142, putative cytoch 100.0 1.2E-58   4E-63  440.2  32.8  374   54-508    18-394 (398)
 47 2y5n_A MYCG, P-450-like protei 100.0   7E-59 2.4E-63  442.8  30.5  374   55-505    38-417 (417)
 48 3ivy_A Cytochrome P450 CYP125; 100.0 1.1E-58 3.8E-63  444.3  31.9  394   31-508    17-428 (433)
 49 2z3t_A Cytochrome P450; monoxy 100.0 3.4E-59 1.1E-63  446.5  27.8  378   55-507    21-415 (425)
 50 3nc3_A Cytochrome P450 CYPX; c 100.0 1.6E-59 5.4E-64  450.6  25.5  382   58-507    57-440 (441)
 51 1gwi_A CYP154C1, cytochrome P4 100.0 2.8E-59 9.5E-64  445.4  26.2  377   55-508    18-409 (411)
 52 3buj_A CALO2; heme, iron, meta 100.0 3.5E-59 1.2E-63  443.5  26.1  375   55-508    14-396 (397)
 53 1q5d_A P450 epoxidase; cytochr 100.0 1.9E-59 6.4E-64  448.1  23.6  380   55-508    27-416 (419)
 54 3lxh_A Cytochrome P450; heme,  100.0 2.2E-58 7.5E-63  441.3  30.6  377   54-508    38-417 (421)
 55 3abb_A CYP105D6, cytochrome P4 100.0 2.8E-59 9.4E-64  445.7  24.2  373   55-508    25-407 (408)
 56 1z8o_A 6-deoxyerythronolide B  100.0 1.2E-58 4.2E-63  440.6  28.3  374   54-506    14-403 (404)
 57 3tyw_A Putative cytochrome P45 100.0 2.2E-58 7.4E-63  440.8  29.7  351   55-482    30-389 (417)
 58 2uuq_A CYP130, cytochrome P450 100.0 2.5E-59 8.4E-64  445.8  23.0  374   55-508    26-413 (414)
 59 2wm5_A CYP124, putative cytoch 100.0 7.5E-58 2.6E-62  438.1  33.0  379   55-506    45-435 (435)
 60 3oft_A Cytochrome P450, CYP101 100.0 1.4E-58 4.8E-63  439.9  26.1  370   54-506    24-395 (396)
 61 3tkt_A Cytochrome P450; aromat 100.0 1.8E-58 6.1E-63  444.8  27.0  385   55-507    46-449 (450)
 62 2z36_A MOXA, cytochrome P450 t 100.0 3.3E-58 1.1E-62  437.9  27.5  392   29-505     4-407 (413)
 63 2xbk_A PIMD protein; epoxidati 100.0 1.8E-57 6.2E-62  430.7  31.0  364   56-505    28-404 (404)
 64 3oo3_A OXY protein; cytochrome 100.0   2E-57 6.9E-62  430.1  29.4  366   55-505    13-384 (384)
 65 1lfk_A OXYB, P450 monooxygenas 100.0 1.1E-57 3.8E-62  433.1  27.3  366   61-505    20-398 (398)
 66 1n40_A P450 MT2, cytochrome P4 100.0 8.2E-58 2.8E-62  433.4  26.0  370   55-505    17-396 (396)
 67 3r9b_A Cytochrome P450 164A2;  100.0   4E-58 1.4E-62  440.0  23.9  380   54-508    29-417 (418)
 68 3mgx_A Putative P450 monooxyge 100.0 1.3E-57 4.4E-62  433.4  27.1  372   54-508    37-415 (415)
 69 3rwl_A Cytochrome P450 alkane  100.0 1.4E-55 4.7E-60  421.3  33.7  378   54-507    38-426 (426)
 70 1io7_A Cytochrome P450 CYP119; 100.0 9.9E-56 3.4E-60  415.1  22.9  354   58-508     3-367 (368)
 71 2rfb_A Cytochrome P450; heme,  100.0 2.4E-55 8.4E-60  408.3  24.1  320   65-482     2-324 (343)
 72 3b4x_A 367AA long hypothetical 100.0 2.4E-55 8.4E-60  411.7  23.9  353   58-507     3-366 (367)
 73 2wiy_A XPLA-heme, cytochrome P 100.0 9.7E-55 3.3E-59  411.7  24.7  372   55-505    21-393 (394)
 74 3p3o_A Cytochrome P450; monoox 100.0 2.1E-55 7.1E-60  419.4  17.8  369   62-507    39-415 (416)
 75 4dnj_A Putative cytochrome P45 100.0 4.7E-53 1.6E-57  401.9  27.4  387   37-507    17-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 2.1E-48 7.2E-53  368.8  31.9  376   54-506    37-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0   1E-46 3.4E-51  348.7   0.6  336   33-505    35-381 (381)
 78 2e2s_A Agelenin; cystine knot,  41.9      16 0.00056   19.2   1.8   15  442-456     7-21  (36)
 79 1whv_A Poly(A)-specific ribonu  40.9      58   0.002   22.7   4.9   37   58-94     30-67  (100)
 80 3d2w_A TAR DNA-binding protein  40.7      63  0.0022   21.7   5.4   54   34-92      7-64  (89)
 81 1s79_A Lupus LA protein; RRM,   40.3      86  0.0029   21.9   6.2   53   40-97     13-73  (103)
 82 2ks1_B Epidermal growth factor  37.7      51  0.0017   19.0   3.6    7   20-26     32-38  (44)
 83 2l2t_A Receptor tyrosine-prote  35.3      58   0.002   18.7   3.6    7   20-26     31-37  (44)
 84 2diu_A KIAA0430 protein; struc  33.2 1.2E+02  0.0041   21.0   6.6   61   41-103    12-74  (96)
 85 1m46_B IQ4, IQ4 motif from MYO  31.9      40  0.0014   15.8   2.0   12  332-343     8-19  (26)
 86 1iqt_A AUF1, heterogeneous nuc  31.1      95  0.0032   19.6   5.0   40   58-97     14-62  (75)
 87 3s6e_A RNA-binding protein 39;  30.2      68  0.0023   23.1   4.3   68   34-101     3-81  (114)
 88 3lqv_A PRE-mRNA branch site pr  28.5 1.5E+02  0.0053   20.8   7.5   56   34-94      4-65  (115)
 89 1nrj_A Signal recognition part  27.6      18  0.0006   27.0   0.7   22  452-473    18-39  (158)
 90 2dnr_A Synaptojanin-1; RRM dom  24.6 1.4E+02  0.0049   20.4   4.8   44   56-99     28-72  (91)
 91 2mss_A Protein (musashi1); RNA  23.0 1.5E+02  0.0051   18.7   5.3   40   58-97     14-62  (75)
 92 3ue2_A Poly(U)-binding-splicin  22.1 1.9E+02  0.0065   20.8   5.5   66   37-102    19-98  (118)
 93 2nlw_A Eukaryotic translation   21.0 1.9E+02  0.0065   19.9   5.3   56   40-95     17-80  (105)

No 1  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=1.1e-77  Score=588.35  Aligned_cols=457  Identities=21%  Similarity=0.385  Sum_probs=341.8

Q ss_pred             CCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceE
Q 036686           32 NLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRL  111 (508)
Q Consensus        32 ~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~  111 (508)
                      +.||||+++|++||++++..  .+.+..+.+|+++||+||++++|+.++|+|+||+.+++||.+++..|+.++.......
T Consensus        10 kLPPGP~~lP~iGn~~~~~~--~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~   87 (479)
T 3tbg_A           10 KLPPGPLPLPGLGNLLHVDF--QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI   87 (479)
T ss_dssp             CCCCCSCCBTTTBTGGGCCT--TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGG
T ss_pred             CCCCCCCCcCcccchHhhcC--CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHH
Confidence            57999999999999988743  3566779999999999999999999999999999999999888888887765443322


Q ss_pred             E-eecCccceeeCCCChhHHHHHHHhHhhhcChhhhhh--hhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhh
Q 036686          112 V-FSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQ--CSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       112 ~-~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      . .+....++.+..+|+.|+.+|+.+ .+.|+...+..  +...+......+...+....   +..+|+..++..+++++
T Consensus        88 ~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~  163 (479)
T 3tbg_A           88 LGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANHS---GRPFRPNGLLDKAVSNV  163 (479)
T ss_dssp             GTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTT---TCCBCTHHHHHHHHHHH
T ss_pred             hccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhcc---CCcccHHHHHHHHHHHH
Confidence            1 122223445556799999999965 55666555442  34444445555555544322   66899999999999999


Q ss_pred             hhhhhcccccchHH--HHHHHHHHHHHHHhcCCC---cccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          189 LICLCFGAKISEER--IKHIESILKDVMLITSPQ---LPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       189 ~~~~~fg~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      ++.++||..++...  ..................   .....|++... .....+.....+...+.+.+.+++..+....
T Consensus       164 ~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (479)
T 3tbg_A          164 IASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI-PALAGKVLRFQKAFLTQLDELLTEHRMTWDP  242 (479)
T ss_dssp             HHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS-HHHHHHHTHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred             HHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999999885322  222333333322222221   11112222211 1222333444455556666666655554311


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVA  343 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~  343 (508)
                      .       .......+.+.........+....++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|++.
T Consensus       243 ~-------~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  315 (479)
T 3tbg_A          243 A-------QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDD  315 (479)
T ss_dssp             T-------SCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             c-------cccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence            1       011110012222222333333447999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 036686          344 AVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRP  423 (508)
Q Consensus       344 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  423 (508)
                      +++.++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|
T Consensus       316 ~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~P  395 (479)
T 3tbg_A          316 VIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHP  395 (479)
T ss_dssp             HTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCG
T ss_pred             HHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCc
Confidence            99998899999999999999999999999999999888888899999999999999999999999999999999999999


Q ss_pred             CcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCc-ccceeeeecCcee
Q 036686          424 ERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTE-TYAFTVVMKNSLK  502 (508)
Q Consensus       424 ~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  502 (508)
                      |||++++++.     .++..|+|||+|+|.|+|++||++|+++++++||++|+|+++++.+.+... ..++++.| .+++
T Consensus       396 eRfl~~~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P-~~~~  469 (479)
T 3tbg_A          396 EHFLDAQGHF-----VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSP-SPYE  469 (479)
T ss_dssp             GGGBCTTCCB-----CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEE-CCCC
T ss_pred             cccCCCCccc-----CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecC-CCeE
Confidence            9999876532     246789999999999999999999999999999999999998876543332 34556655 6899


Q ss_pred             EEeecC
Q 036686          503 AVILPR  508 (508)
Q Consensus       503 v~~~~r  508 (508)
                      |+++||
T Consensus       470 v~~~pR  475 (479)
T 3tbg_A          470 LCAVPR  475 (479)
T ss_dssp             BEEEEC
T ss_pred             EEEEEC
Confidence            999998


No 2  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=5.2e-77  Score=584.06  Aligned_cols=454  Identities=21%  Similarity=0.350  Sum_probs=363.3

Q ss_pred             cCCCCCCCCCCCCCCCccccchhhhhhh--cCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCC
Q 036686           25 TTGGGPKNLPPGPRGWPLVGNLVQVILQ--RRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFAS  102 (508)
Q Consensus        25 ~~~~~~~~~ppgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~  102 (508)
                      +...+|.+.+|||+++|++||++.+...  .++.+..+.+++++||+||++++|+.+.++|+||+.+++|+.++ ..|.+
T Consensus        17 ~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~   95 (482)
T 3k9v_A           17 DGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQ   95 (482)
T ss_dssp             --CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCC
T ss_pred             ccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCC
Confidence            3456788999999999999999887643  34678889999999999999999999999999999999999774 56766


Q ss_pred             CCCCCCce--EEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHH
Q 036686          103 RPPDSPIR--LVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS  180 (508)
Q Consensus       103 ~~~~~~~~--~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~  180 (508)
                      ++....+.  ......+.++.+ .+|+.|+++||.+...++++..++.+.+.+.++++.+++.+......+++++|+..+
T Consensus        96 r~~~~~~~~~~~~~~~~~~l~~-~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~  174 (482)
T 3k9v_A           96 RLEIKPWKAYRDHRNEAYGLMI-LEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSE  174 (482)
T ss_dssp             CCCCHHHHHHHHHHTCCCCTTT-CCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHH
T ss_pred             CCCchHHHHHHHhcCCCCCcee-CCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHH
Confidence            65432110  001111223444 379999999997755455888899999999999999999998765433668999999


Q ss_pred             HHHHHHhhhhhhhcccccch------HHHHHHHHHHHHHHHhcCCCcccccc-cch-hhhHhHHHHHHHHHHHHHHHhHH
Q 036686          181 CRLTICSILICLCFGAKISE------ERIKHIESILKDVMLITSPQLPDFLP-ILT-PLFRRQMREAKELRKRQMECLVP  252 (508)
Q Consensus       181 ~~~~~~~~~~~~~fg~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~-~~~~~~~~~~~~~~~~~~~~~~~  252 (508)
                      +..+++|+++.++||.+++.      .....+.+....+......  ...+| ++. .+....++...+..+.+.+++.+
T Consensus       175 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~  252 (482)
T 3k9v_A          175 LNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK--MMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKP  252 (482)
T ss_dssp             HHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG--GSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH--HHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998831      2223444444444332221  11222 121 22223345556666777788888


Q ss_pred             HHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChH
Q 036686          253 LIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQE  332 (508)
Q Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~  332 (508)
                      .++++++...+        + ...   |++..++..     +.++++++.+++.++++||+|||+++++|++++|++||+
T Consensus       253 ~i~~r~~~~~~--------~-~~~---d~l~~ll~~-----~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~  315 (482)
T 3k9v_A          253 CIDNRLQRYSQ--------Q-PGA---DFLCDIYQQ-----DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQ  315 (482)
T ss_dssp             HHHHHHHHTTT--------C-TTS---CHHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred             HHHHHHHHhcc--------C-Cch---HHHHHHHhc-----cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHH
Confidence            88887764311        1 112   677777753     258999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCC
Q 036686          333 IQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDP  412 (508)
Q Consensus       333 ~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~  412 (508)
                      +|+|+++||++++++++.++++++++||||+|||+|+|||+|+++. ++|.+.+|++++||.|||||.|+++.+++||||
T Consensus       316 ~q~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~  394 (482)
T 3k9v_A          316 AQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSE  394 (482)
T ss_dssp             HHHHHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSGGGGCT
T ss_pred             HHHHHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEccccccCCC
Confidence            9999999999999988889999999999999999999999999997 689999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccc
Q 036686          413 DMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYA  492 (508)
Q Consensus       413 ~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  492 (508)
                      ++|+||++|+||||++++.+      ..+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++.+.  .....
T Consensus       395 ~~~~~p~~F~PeRfl~~~~~------~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~  466 (482)
T 3k9v_A          395 DNFEDSHKFRPERWLQKEKK------INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPV--EMLHL  466 (482)
T ss_dssp             TTCSSTTSCCGGGGTCTTSC------CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCC--CEEES
T ss_pred             ccCCCcCccCccccCCCCCC------CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCc--ccccc
Confidence            99999999999999987541      24578999999999999999999999999999999999998876533  33456


Q ss_pred             eeeeecCceeEEeecC
Q 036686          493 FTVVMKNSLKAVILPR  508 (508)
Q Consensus       493 ~~~~~~~~~~v~~~~r  508 (508)
                      .++.++.+++|++++|
T Consensus       467 ~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          467 GILVPSRELPIAFRPR  482 (482)
T ss_dssp             SSEEESSSCCEEEEEC
T ss_pred             eeecCCCCcceEEeeC
Confidence            7888999999999998


No 3  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=4.4e-77  Score=585.43  Aligned_cols=457  Identities=24%  Similarity=0.383  Sum_probs=358.7

Q ss_pred             CCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI  109 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~  109 (508)
                      ..+.||||+++|++||++.+.. .+..+..+.+|+++||+||++++|+.++++|+||+.+++++.+++..|..++.....
T Consensus         6 ~~~~PPgP~~lPliGnl~~l~~-~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~   84 (494)
T 3swz_A            6 GAKYPKSLLSLPLVGSLPFLPR-HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL   84 (494)
T ss_dssp             ------CCBCCCEEEEESSCTT-SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred             CCCCCCCCCCCCeEcchHHhCC-CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence            4567999999999999987643 345778899999999999999999999999999999999999988889887754322


Q ss_pred             eEEeecCccceeeCCCChhHHHHHHHhHhhhcCh--hhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHh
Q 036686          110 RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITP--TRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICS  187 (508)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~  187 (508)
                       ..++.+..++.+..+|+.|+.+||.+ .+.|+.  ..+..+.+.+.+++..+++.+....   +..+|+..++..+++|
T Consensus        85 -~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~---~~~vd~~~~~~~~t~d  159 (494)
T 3swz_A           85 -DIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATHN---GQSIDISFPVFVAVTN  159 (494)
T ss_dssp             -HHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTT---TEEECCHHHHHHHHHH
T ss_pred             -HHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcC---CCcccHHHHHHHHHHH
Confidence             12232333555565799999999965 667763  4567788899999999999887532   6789999999999999


Q ss_pred             hhhhhhcccccchH--HHHHHHHHHHHHHHhcCC-CcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhC
Q 036686          188 ILICLCFGAKISEE--RIKHIESILKDVMLITSP-QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG  264 (508)
Q Consensus       188 ~~~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (508)
                      +++.++||.+++..  ....+......+...... .+.+++|++..++....+......+.+.+++...++++++...  
T Consensus       160 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  237 (494)
T 3swz_A          160 VISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFR--  237 (494)
T ss_dssp             HHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred             HHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence            99999999988432  223333333333333332 5566678776554444455566666667777777766554321  


Q ss_pred             CCCCCCCccccccchhhHHhhhcCCCC----------CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHH
Q 036686          265 QNPNSESEMVSPIGAAYVDSLFGLEPT----------GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQ  334 (508)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~ll~~~~~----------~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~  334 (508)
                             .....   |+++.+++...+          +...++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus       238 -------~~~~~---d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q  307 (494)
T 3swz_A          238 -------SDSIT---NMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVK  307 (494)
T ss_dssp             -------TTCCC---SHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred             -------ccchh---HHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHH
Confidence                   11112   788887764211          1225899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCC
Q 036686          335 EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDM  414 (508)
Q Consensus       335 ~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~  414 (508)
                      +|+|+||+++++.++.++++++.+||||+|||+|+||++|+++..++|.+++|++++||.|||||.|+++.+++||||++
T Consensus       308 ~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~  387 (494)
T 3swz_A          308 KKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKE  387 (494)
T ss_dssp             HHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTT
T ss_pred             HHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCccc
Confidence            99999999999988889999999999999999999999999998889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCC-Ccccce
Q 036686          415 WSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP-TETYAF  493 (508)
Q Consensus       415 ~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~-~~~~~~  493 (508)
                      |+||++|+||||+++++...   ......|+|||+|+|.|+|++||++|++++++.|+++|+|++.++...+. ....+.
T Consensus       388 ~~dp~~F~PeRfl~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  464 (494)
T 3swz_A          388 WHQPDQFMPERFLNPAGTQL---ISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKV  464 (494)
T ss_dssp             SSSTTSCCGGGGBCTTSSSB---CCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESS
T ss_pred             CCCcccCCcccccCCCCccc---cCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccce
Confidence            99999999999998754221   12356899999999999999999999999999999999999887543332 223334


Q ss_pred             eeeecCceeEEeecC
Q 036686          494 TVVMKNSLKAVILPR  508 (508)
Q Consensus       494 ~~~~~~~~~v~~~~r  508 (508)
                      +.. +.+++|+++||
T Consensus       465 ~~~-p~~~~v~~~~R  478 (494)
T 3swz_A          465 VFL-IDSFKVKIKVR  478 (494)
T ss_dssp             SEE-CCCCCEEEEEC
T ss_pred             eec-CCCcEEEEEEc
Confidence            444 57899999998


No 4  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.4e-77  Score=590.00  Aligned_cols=458  Identities=22%  Similarity=0.391  Sum_probs=345.2

Q ss_pred             CCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC
Q 036686           29 GPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP  108 (508)
Q Consensus        29 ~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~  108 (508)
                      .+.+.||||+++|++||++.+.   .+.+..+.+++++||+||++++|+.++++|+||+.+++|+.++...|.+++....
T Consensus         6 ~~~~~pPgP~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~   82 (507)
T 3pm0_A            6 SSKGKPPGPFAWPLIGNAAAVG---QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFAS   82 (507)
T ss_dssp             -------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHH
T ss_pred             CCCCCCcCCCCCCeeCchhhcC---ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchH
Confidence            4567899999999999998874   4677889999999999999999999999999999999999888788887765433


Q ss_pred             ceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhh------hhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHH
Q 036686          109 IRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRV------KQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCR  182 (508)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l------~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~  182 (508)
                      ... .. ++.++.+..+|+.|+.+|+.+ .+.|+....      +.+.+.+.++++.+++.+.....+ +..+|+..++.
T Consensus        83 ~~~-~~-~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~-~~~vd~~~~~~  158 (507)
T 3pm0_A           83 FRV-VS-GGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSAD-GAFLDPRPLTV  158 (507)
T ss_dssp             HHH-GG-GGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGG-GCCBCCHHHHH
T ss_pred             HHh-hc-CCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhccc-CCCcChHHHHH
Confidence            221 11 223454555799999999966 455543332      337888999999999999875444 67899999999


Q ss_pred             HHHHhhhhhhhcccccchH--HHHHHHHHHHHHHHhcCC-CcccccccchhhhHh---HHHHHHHHHHHHHHHhHHHHHH
Q 036686          183 LTICSILICLCFGAKISEE--RIKHIESILKDVMLITSP-QLPDFLPILTPLFRR---QMREAKELRKRQMECLVPLIRN  256 (508)
Q Consensus       183 ~~~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~---~~~~~~~~~~~~~~~~~~~i~~  256 (508)
                      .+++++++.++||.+++..  ....+.+....+...... .+...+|++..++..   ..+...+..+.+.+++.+.+++
T Consensus       159 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~  238 (507)
T 3pm0_A          159 VAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLR  238 (507)
T ss_dssp             HHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998532  223333333343333332 445557766544322   4566677778888888888888


Q ss_pred             HHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCC--------CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHh
Q 036686          257 RKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTG--------REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLV  328 (508)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--------~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~  328 (508)
                      +++....        +....   |+++.+++....+        ...++++++.+++..+++||+|||+++++|++++|+
T Consensus       239 ~~~~~~~--------~~~~~---d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~  307 (507)
T 3pm0_A          239 HCESLRP--------GAAPR---DMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFT  307 (507)
T ss_dssp             HHHHCCT--------TCCCC---SHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhcccc--------ccCCc---cHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence            8775421        11122   7777777432210        115899999999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEccccc
Q 036686          329 LNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWL  408 (508)
Q Consensus       329 ~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~  408 (508)
                      +||++|+++|+||++++++++.++++++++||||+|||+|||||+|+++..++|.+.+|++++||.|||||.|+++.+++
T Consensus       308 ~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~  387 (507)
T 3pm0_A          308 RYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSV  387 (507)
T ss_dssp             HCHHHHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHH
T ss_pred             hCHHHHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHH
Confidence            99999999999999999988889999999999999999999999999998788999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCC
Q 036686          409 TEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPT  488 (508)
Q Consensus       409 ~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~  488 (508)
                      ||||++|+||++|+||||++++++..   ...+..|+|||+|+|+|+|++||++|+++++++|+++|++++.++...+..
T Consensus       388 ~~d~~~~~dp~~F~PeRfl~~~~~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  464 (507)
T 3pm0_A          388 NHDPLKWPNPENFDPARFLDKDGLIN---KDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMN  464 (507)
T ss_dssp             HSCTTTCSSSSSCCGGGGBCTTSCBC---HHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCC
T ss_pred             hCCcccCCCcCccCCCcccCCCCccc---CCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCC
Confidence            99999999999999999998754211   112358999999999999999999999999999999999999876544333


Q ss_pred             cccceeeeecCceeEEeecC
Q 036686          489 ETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       489 ~~~~~~~~~~~~~~v~~~~r  508 (508)
                      ...++++.+ .+++|++++|
T Consensus       465 ~~~~~~~~p-~~~~v~~~~R  483 (507)
T 3pm0_A          465 FSYGLTIKP-KSFKVNVTLR  483 (507)
T ss_dssp             EEESSSEEE-CSCCEEEEES
T ss_pred             CCCCccccC-CCcEEEEEEc
Confidence            334455555 5689999987


No 5  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=1e-75  Score=573.67  Aligned_cols=453  Identities=22%  Similarity=0.345  Sum_probs=350.8

Q ss_pred             CCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           28 GGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      ..+.+.||||+++|++||++.+.  ..+.+..+.+|+++||+||++++|+.++++|+||+.+++||.++...|.+++...
T Consensus         6 ~~~~~lpPgP~~~PliG~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~   83 (476)
T 3e6i_A            6 SSKGKLPPGPFPLPIIGNLFQLE--LKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP   83 (476)
T ss_dssp             ----CCCCCCCCBTTTBTGGGCC--TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG
T ss_pred             cCCCCCCcCCCCcccccChhhhc--cccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc
Confidence            34567899999999999998862  3467788999999999999999999999999999999999988777787766543


Q ss_pred             CceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhh--hhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHH
Q 036686          108 PIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRV--KQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTI  185 (508)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~  185 (508)
                      .+....+  . ++.+. +|+.|+++|+.. .+.+....+  ..+.+.+.++++.+++.+....   ++.+|+..++..++
T Consensus        84 ~~~~~~~--~-~l~~~-~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~---~~~~d~~~~~~~~~  155 (476)
T 3e6i_A           84 AFHAHRD--R-GIIFN-NGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKTQ---GQPFDPTFLIGCAP  155 (476)
T ss_dssp             GGGGGTT--S-SSTTC-CSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTT---TSCBCTHHHHTHHH
T ss_pred             hhheecC--C-CEEec-CCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhC---CCCcChHHHHHHHH
Confidence            3322222  2 34443 699999999954 455544332  3456788889999999986532   66899999999999


Q ss_pred             HhhhhhhhcccccchH--HHHHHHHHHHHHHHhcCC---CcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 036686          186 CSILICLCFGAKISEE--RIKHIESILKDVMLITSP---QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAF  260 (508)
Q Consensus       186 ~~~~~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  260 (508)
                      +++++.++||.+++..  ....+...+...+.....   .+...+|.+...+....++..+..+.+.+++.+.++++++.
T Consensus       156 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~~~~~  235 (476)
T 3e6i_A          156 CNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQS  235 (476)
T ss_dssp             HHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999988532  223333444443333222   11223342221222334556677788888888888887764


Q ss_pred             HhhCCCCCCCCccccccchhhHHhhhcCCCC----CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHH
Q 036686          261 VEKGQNPNSESEMVSPIGAAYVDSLFGLEPT----GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEK  336 (508)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~  336 (508)
                      ..        .+. ..   |+++.++....+    ....++++++.++++.+++||+|||+++++|++++|++||++|++
T Consensus       236 ~~--------~~~-~~---d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~  303 (476)
T 3e6i_A          236 LD--------PNC-PR---DLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEK  303 (476)
T ss_dssp             CC--------TTS-CC---SHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             CC--------CCC-Cc---cHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHH
Confidence            31        111 11   667766643221    123689999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCC
Q 036686          337 LYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWS  416 (508)
Q Consensus       337 lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  416 (508)
                      +++||+++++.++.++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+
T Consensus       304 l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~  383 (476)
T 3e6i_A          304 LHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFP  383 (476)
T ss_dssp             HHHHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSS
T ss_pred             HHHHHHHhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCC
Confidence            99999999998888999999999999999999999999999778899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCC-CCCCCCCcc-ccee
Q 036686          417 DPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVP-GAPPDPTET-YAFT  494 (508)
Q Consensus       417 ~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~-~~~~~~~~~-~~~~  494 (508)
                      ||++||||||++++++.     .....|+|||+|+|.|+|++||++|+++++++|+++|++++.. +...+.... .+++
T Consensus       384 ~p~~F~PeR~l~~~~~~-----~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  458 (476)
T 3e6i_A          384 DPEKFKPEHFLNENGKF-----KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFG  458 (476)
T ss_dssp             STTSCCGGGGBCTTSSB-----CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSS
T ss_pred             CccccCchhhcCCCCCc-----cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccc
Confidence            99999999999865421     2456899999999999999999999999999999999999754 333333333 3444


Q ss_pred             eeecCceeEEeecC
Q 036686          495 VVMKNSLKAVILPR  508 (508)
Q Consensus       495 ~~~~~~~~v~~~~r  508 (508)
                      . .+.+++|+++||
T Consensus       459 ~-~p~~~~~~~~~R  471 (476)
T 3e6i_A          459 C-IPPRYKLCVIPR  471 (476)
T ss_dssp             E-ECCCCCEEEEEC
T ss_pred             c-CCCCeEEEEEec
Confidence            4 456899999998


No 6  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=2.9e-75  Score=574.40  Aligned_cols=447  Identities=15%  Similarity=0.263  Sum_probs=352.8

Q ss_pred             CCCCCCCCCCCccccchhhhhhhc-CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQR-RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP  108 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~  108 (508)
                      +.+.||||+++|++||++.+.... ...+..+.+|+++||+||++++|+.+.++|+||+.+++++.+  ..|..++....
T Consensus        43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~  120 (503)
T 3s79_A           43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKL  120 (503)
T ss_dssp             --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHH
T ss_pred             ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhh
Confidence            456899999999999998875432 245667899999999999999999999999999999999954  35665543221


Q ss_pred             ceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhh
Q 036686          109 IRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      .....+.++.++.+..+|+.|+++||.+ .+.|+...++.+.+.+.+++..+++.+....+. ++.+|+..++..+++++
T Consensus       121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~-~~~vdl~~~~~~~~~~v  198 (503)
T 3s79_A          121 GLQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNE-SGYVDVLTLLRRVMLDT  198 (503)
T ss_dssp             HHHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCT-TSCBCHHHHHHHHHHHH
T ss_pred             hhhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEcHHHHHHHHHHHH
Confidence            1111122233444555799999999965 689999999999999999999999888764433 56899999999999999


Q ss_pred             hhhhhcccccchHH-HHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCC
Q 036686          189 LICLCFGAKISEER-IKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP  267 (508)
Q Consensus       189 ~~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (508)
                      ++.++||.++++.. ...+.+.+........  ....+..+.    ...++..+..+.+.+++.+.++++++....++  
T Consensus       199 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--  270 (503)
T 3s79_A          199 SNTLFLRIPLDESAIVVKIQGYFDAWQALLI--KPDIFFKIS----WLYKKYEKSVKDLKDAIEVLIAEKRRRISTEE--  270 (503)
T ss_dssp             HHHHHTCCCCCHHHHHHHHHHHHHHHHHHTT--CCHHHHHSG----GGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCT--
T ss_pred             HHHHHcCcccCchhHHHHHHHHHHHHHHHhc--CcHHHhhcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--
Confidence            99999999986432 2223333333222221  111111111    11245566777888888999988887663211  


Q ss_pred             CCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC
Q 036686          268 NSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGK  347 (508)
Q Consensus       268 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~  347 (508)
                         ......   |+++.+++...  .++++++++.++++.+++||+|||+++++|++++|++||++|+|+|+||+++++ 
T Consensus       271 ---~~~~~~---d~l~~ll~~~~--~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-  341 (503)
T 3s79_A          271 ---KLEECM---DFATELILAEK--RGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-  341 (503)
T ss_dssp             ---TTTTTC---CHHHHHHHHHH--TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-
T ss_pred             ---ccchHH---HHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-
Confidence               011112   78888886542  236999999999999999999999999999999999999999999999999998 


Q ss_pred             CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCccc
Q 036686          348 DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL  427 (508)
Q Consensus       348 ~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l  427 (508)
                      ++.++++++++||||+|||+|+||++|+++.. .|.+++|++++||.|||||.|+++.+++|+| ++|+||++||||||+
T Consensus       342 ~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~  419 (503)
T 3s79_A          342 ERDIKIDDIQKLKVMENFIYESMRYQPVVDLV-MRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFA  419 (503)
T ss_dssp             TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCE-EEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGS
T ss_pred             CCCCCHHHHhcCHHHHHHHHhhhccCCCcccc-cccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcC
Confidence            56799999999999999999999999999985 5999999999999999999999999999998 999999999999999


Q ss_pred             CCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCC-CcccceeeeecCc---eeE
Q 036686          428 EGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDP-TETYAFTVVMKNS---LKA  503 (508)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~v  503 (508)
                      +..         +...|+|||+|+|.|+|++||.+|+++++++|+++|++++.++...+. ....+++..|+.+   ++|
T Consensus       420 ~~~---------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v  490 (503)
T 3s79_A          420 KNV---------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEM  490 (503)
T ss_dssp             SCC---------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCE
T ss_pred             CCC---------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeE
Confidence            752         345799999999999999999999999999999999999987664332 3356777887765   999


Q ss_pred             EeecC
Q 036686          504 VILPR  508 (508)
Q Consensus       504 ~~~~r  508 (508)
                      +++||
T Consensus       491 ~~~~R  495 (503)
T 3s79_A          491 IFTPR  495 (503)
T ss_dssp             EEEEC
T ss_pred             EeccC
Confidence            99998


No 7  
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=1.1e-75  Score=576.32  Aligned_cols=450  Identities=24%  Similarity=0.384  Sum_probs=347.3

Q ss_pred             HHhcCCCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcC
Q 036686           22 YSSTTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFA  101 (508)
Q Consensus        22 ~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~  101 (508)
                      ++.++...+.+.||||++      ++.+  ..++.+..+.+|+++||+||++++|+.++++|+||+.+++|+.+++..|.
T Consensus        19 ~~~~~~~~~~~lPPGP~~------l~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~   90 (496)
T 3qz1_A           19 LWGRWKLRNLHLPPLVPG------FLHL--LQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFA   90 (496)
T ss_dssp             ----------CCCCBCSC------SCTT--SSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTC
T ss_pred             HHhhhhccCCCCCcCCcc------cccc--CCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhC
Confidence            333444556788999986      2232  24567888999999999999999999999999999999999988877888


Q ss_pred             CCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH
Q 036686          102 SRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC  181 (508)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~  181 (508)
                      +++........ ..+..++.+..+|+.|+++||.+ .+.|+...++.+.+.+.++++.+++.+...   .++++|+..++
T Consensus        91 ~r~~~~~~~~~-~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~  165 (496)
T 3qz1_A           91 GRPQIPSYKLV-SQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRVQ---AGAPVTIQKEF  165 (496)
T ss_dssp             BCCCCTTTTTS-CTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHTT---CSCCCHHHHHH
T ss_pred             CCCCcchHHHh-cCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHhc---CCCccCHHHHH
Confidence            77655433222 22232555554499999999955 678887777889999999999999999762   26789999999


Q ss_pred             HHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCC---CcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHH
Q 036686          182 RLTICSILICLCFGAKISEERIKHIESILKDVMLITSP---QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRK  258 (508)
Q Consensus       182 ~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  258 (508)
                      ..+++|+++.++||. .++.....+.+....+......   .+.+.+|++..++....+++.+..+.+.+++.+.+++++
T Consensus       166 ~~~~~dvi~~~~fG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~  244 (496)
T 3qz1_A          166 SLLTCSIICYLTFGN-KEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHK  244 (496)
T ss_dssp             THHHHHHTTTTSTTC-CCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCC-CCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998 3333333333333332221111   123345655544434456677788888889999888887


Q ss_pred             HHHhhCCCCCCCCccccccchhhHHhhhcCCCCC----C-CCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHH
Q 036686          259 AFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTG----R-EQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEI  333 (508)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~-~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~  333 (508)
                      +...        .+ ...   |+++.+++...+.    + +.++++++.+++.++++||+|||+++++|++++|++||++
T Consensus       245 ~~~~--------~~-~~~---d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~  312 (496)
T 3qz1_A          245 ESMV--------AG-QWR---DMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEI  312 (496)
T ss_dssp             HSCC--------SS-CCS---SSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             hhcc--------CC-Ccc---chHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHH
Confidence            6431        11 112   7888888765432    1 2689999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcC----CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccc
Q 036686          334 QEKLYKEIVAAVGK----DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLT  409 (508)
Q Consensus       334 ~~~lr~Ei~~~~~~----~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~  409 (508)
                      |+++|+|+++++++    ++.+ ++++++||||+|||+|+||++|+++..++|.+++|++++||.|||||.|+++.+++|
T Consensus       313 ~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~  391 (496)
T 3qz1_A          313 QRRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAH  391 (496)
T ss_dssp             HHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHT
T ss_pred             HHHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhh
Confidence            99999999999987    5567 999999999999999999999999987889999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCC-CCCC
Q 036686          410 EDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAP-PDPT  488 (508)
Q Consensus       410 ~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~-~~~~  488 (508)
                      |||++|+||++|+||||++++.         ...|+|||+|+|+|+|++||++|+++++++|+++|++++.++.. ++..
T Consensus       392 ~d~~~~~dp~~F~PeR~l~~~~---------~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~  462 (496)
T 3qz1_A          392 LDETVWEQPHEFRPDRFLEPGA---------NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQ  462 (496)
T ss_dssp             TCTTTSSSTTSCCCCCCC---C---------CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSC
T ss_pred             CChhhcCCcccCCcccccCCCC---------CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCC
Confidence            9999999999999999997642         23799999999999999999999999999999999999886432 2222


Q ss_pred             cc--cceeeeecCceeEEeecC
Q 036686          489 ET--YAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       489 ~~--~~~~~~~~~~~~v~~~~r  508 (508)
                      ..  .+++..+ .+++|+++||
T Consensus       463 ~~~~~~~~~~~-~~~~v~~~~R  483 (496)
T 3qz1_A          463 PDPYCGVNLKV-QPFQVRLQPR  483 (496)
T ss_dssp             CSCCCSSCCCC-CCCCCCCCCC
T ss_pred             cccCcceEecC-CceEEEEEEe
Confidence            22  3555555 5899999988


No 8  
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=3.6e-75  Score=571.05  Aligned_cols=458  Identities=24%  Similarity=0.439  Sum_probs=355.4

Q ss_pred             CCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           28 GGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      ..+.+.+|||+++|++|+++.+.   .+.+..+.+++++||+||++++|+.++++|+||+.+++|+.+++..|.+++...
T Consensus        12 ~~~lp~~PgP~~~p~~G~~~~~~---~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~   88 (495)
T 2hi4_A           12 PKGLKSPPEPWGWPLLGHVLTLG---KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY   88 (495)
T ss_dssp             CTTCBCCCCCCCBTTTBTHHHHT---TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCH
T ss_pred             CCCCCCCCCCCCCcceeeHHhcC---ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcH
Confidence            34555569999999999998763   357778999999999999999999999999999999999977666787665432


Q ss_pred             CceEEeecCccceeeC-CCChhHHHHHHHhHhhhcC---hhhh---h---hhhhHHHHHHHHHHHHHHHhhccCCccchh
Q 036686          108 PIRLVFSVGKCAINSA-EYGPLWRSLRRNFVTELIT---PTRV---K---QCSWIRTWAMESHMKRLNSEAFDNDLFVEV  177 (508)
Q Consensus       108 ~~~~~~~~~~~~~~~~-~~~~~w~~~R~~~~~~~f~---~~~l---~---~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl  177 (508)
                      .+.. .. ++.++.+. .+|+.|+++|+.+ .+.|+   ....   +   .+.+.+.++++.+++.+...... ++.+|+
T Consensus        89 ~~~~-~~-~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~-~~~~d~  164 (495)
T 2hi4_A           89 TSTL-IT-DGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAG-PGHFDP  164 (495)
T ss_dssp             HHHT-ST-TSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHT-TSCBCH
T ss_pred             HHHH-hc-CCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccC-CCccch
Confidence            1111 11 12244443 4699999999965 55543   3322   2   68888999999999999764333 568999


Q ss_pred             hHHHHHHHHhhhhhhhcccccchH--HHHHHHHHHHHHHHhcCC-CcccccccchhhhHhHHHHHHHHHHHHHHHhHHHH
Q 036686          178 MSSCRLTICSILICLCFGAKISEE--RIKHIESILKDVMLITSP-QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLI  254 (508)
Q Consensus       178 ~~~~~~~~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i  254 (508)
                      ..++..+++|+++.++||.+++.+  ....+.+....+...... ....++|++..+.....++..+..+.+.+++.+.+
T Consensus       165 ~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i  244 (495)
T 2hi4_A          165 YNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTV  244 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999987532  222333333333332221 23455676654433345566777788888999999


Q ss_pred             HHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCC----CCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhC
Q 036686          255 RNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEP----TGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLN  330 (508)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~  330 (508)
                      +++++...        .+ ...   |+++.+++...    +.+..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       245 ~~r~~~~~--------~~-~~~---d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~  312 (495)
T 2hi4_A          245 QEHYQDFD--------KN-SVR---DITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTK  312 (495)
T ss_dssp             HHHHHTCC--------TT-CCC---SHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHhhc--------cc-ccc---cHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhC
Confidence            88776421        11 112   78888874311    1122589999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEccccccc
Q 036686          331 QEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTE  410 (508)
Q Consensus       331 P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~  410 (508)
                      |++|+++++||+++++.++.++++++++||||+|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||
T Consensus       313 P~~~~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~r  392 (495)
T 2hi4_A          313 PEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNH  392 (495)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhC
Confidence            99999999999999998788999999999999999999999999999778899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcc
Q 036686          411 DPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTET  490 (508)
Q Consensus       411 d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  490 (508)
                      ||++|+||++|+||||++++++..  ....+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..++....
T Consensus       393 dp~~~~dP~~F~PeRfl~~~~~~~--~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  470 (495)
T 2hi4_A          393 DPELWEDPSEFRPERFLTADGTAI--NKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPI  470 (495)
T ss_dssp             CTTTCSSTTSCCGGGGBCTTSSSB--CHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCB
T ss_pred             CcccCCCcCccCcccccCCCCccc--ccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCcccc
Confidence            999999999999999997654211  001346799999999999999999999999999999999999877654333344


Q ss_pred             cceeeeecCce-eEEeecC
Q 036686          491 YAFTVVMKNSL-KAVILPR  508 (508)
Q Consensus       491 ~~~~~~~~~~~-~v~~~~r  508 (508)
                      .+++..|+ ++ +|+++ |
T Consensus       471 ~~~~~~p~-~~~~v~~~-R  487 (495)
T 2hi4_A          471 YGLTMKHA-RCEHVQAR-R  487 (495)
T ss_dssp             CSSSCBCC-CCCCBEEE-C
T ss_pred             CCceecCC-CcceEEEE-E
Confidence            45566654 56 88887 6


No 9  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=1.6e-76  Score=575.60  Aligned_cols=440  Identities=20%  Similarity=0.282  Sum_probs=351.5

Q ss_pred             CCCCCCCC-CccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCce
Q 036686           32 NLPPGPRG-WPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIR  110 (508)
Q Consensus        32 ~~ppgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~  110 (508)
                      +.||+|++ +|++||++.+.+   +.+.++.++++|||+||+++++|.++++|+||+.+++++.++...|..++......
T Consensus        11 ~~PP~~~~~lP~iG~~~~~~~---~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~   87 (461)
T 3ld6_A           11 KSPPYIFSPIPFLGHAIAFGK---SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT   87 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred             CCCCCCCCCcCeeeeHHHhhh---CHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhh
Confidence            45788775 899999998865   46677999999999999999999999999999999999988777776554322111


Q ss_pred             -EEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhh
Q 036686          111 -LVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSIL  189 (508)
Q Consensus       111 -~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~  189 (508)
                       ..+  |. ++.+..+|+.|+.+|+.+ .+.|+...++.+.+.+.+.++.+++.+.+     ...+|+...+..++++++
T Consensus        88 ~~~~--g~-~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i  158 (461)
T 3ld6_A           88 TPVF--GK-GVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE-----SGEKNVFEALSELIILTA  158 (461)
T ss_dssp             HHHH--CT-TSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS-----EEEEEHHHHHHHHHHHHH
T ss_pred             hccC--CC-ccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHhh-----cCCccHHHHHHHHHHHHH
Confidence             112  22 344445799999999854 78999999999999999888888877743     557899999999999999


Q ss_pred             hhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCC
Q 036686          190 ICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNS  269 (508)
Q Consensus       190 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  269 (508)
                      +.++||.+++....+.+......+..... .....+|.+.+  .....+..++.+.+.+++.+.+++++...        
T Consensus       159 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~r~~~~--------  227 (461)
T 3ld6_A          159 SHCLHGKEIRSQLNEKVAQLYADLDGGFS-HAAWLLPGWLP--LPSFRRRDRAHREIKDIFYKAIQKRRQSQ--------  227 (461)
T ss_dssp             HHHHTCHHHHHTCCHHHHHHHHHHHTTSS-HHHHHSCTTSC--CHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------
T ss_pred             HHHHcCcchhhhhhhhhhhhhhhhhhhhh-hHHHhhhhhcc--CcHHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence            99999988755433444444443332221 11122333222  12344556667778888888777665421        


Q ss_pred             CCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCC
Q 036686          270 ESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG  349 (508)
Q Consensus       270 ~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~  349 (508)
                         ....   |+++.+++...+++..++++++++++..+++||+|||+++++|++++|++||++|+++|+|+++++++.+
T Consensus       228 ---~~~~---d~l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~  301 (461)
T 3ld6_A          228 ---EKID---DILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENL  301 (461)
T ss_dssp             ---CCCC---SHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTC
T ss_pred             ---CCCc---chhhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccc
Confidence               1112   8999999876655557999999999999999999999999999999999999999999999999998754


Q ss_pred             -CCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccC
Q 036686          350 -LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLE  428 (508)
Q Consensus       350 -~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~  428 (508)
                       .++.+++++||||+|||+|+|||+|+++. ..|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++
T Consensus       302 ~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~  380 (461)
T 3ld6_A          302 PPLTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQ  380 (461)
T ss_dssp             CCCCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGS
T ss_pred             cchhHHHHHHHhhhhheeeeccccCCchhc-cccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCC
Confidence             47889999999999999999999999987 5799999999999999999999999999999999999999999999998


Q ss_pred             CCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          429 GDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +++.     ..++..|+|||+|+|.|+|++||++|++++++.||++|+++++++..+.  .....++.++.++.|+++||
T Consensus       381 ~~~~-----~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~--~~~~~~~~~p~~~~v~~~~R  453 (461)
T 3ld6_A          381 DNPA-----SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPT--VNYTTMIHTPENPVIRYKRR  453 (461)
T ss_dssp             CCHH-----HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCC--BCCSSSSCCBSSCEEEEEEC
T ss_pred             CCcc-----cCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCc--ccccceEEcCCceEEEEEEC
Confidence            7642     1245689999999999999999999999999999999999998865432  22333455567899999998


No 10 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=1e-74  Score=565.74  Aligned_cols=450  Identities=20%  Similarity=0.332  Sum_probs=344.2

Q ss_pred             CCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceE
Q 036686           32 NLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRL  111 (508)
Q Consensus        32 ~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~  111 (508)
                      +.||||+++|++|+++.+.  ..+.+..+.+++++||+||++++|+.+.++|+||+.+++|+.++...|.+++....+..
T Consensus        11 ~~pPgP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~   88 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQIG--IKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAER   88 (477)
T ss_dssp             BCCCCSSSCC-----CCBC--HHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCT
T ss_pred             CCCCCCCCCceeccHhhcC--CCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhh
Confidence            5789999999999998762  23567779999999999999999999999999999999999776667776543221111


Q ss_pred             EeecCccceeeCCCChhHHHHHHHhHhhhcChh--hhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhh
Q 036686          112 VFSVGKCAINSAEYGPLWRSLRRNFVTELITPT--RVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSIL  189 (508)
Q Consensus       112 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~  189 (508)
                      . ..+ .++.+. +|+.|+++||.+ .+.|++.  .++.+.+.+.++++.+++.+....   ++++|+..++..++++++
T Consensus        89 ~-~~~-~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~---~~~vd~~~~~~~~~~~vi  161 (477)
T 1r9o_A           89 A-NRG-FGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKTK---ASPCDPTFILGCAPCNVI  161 (477)
T ss_dssp             T-TCT-TSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTT---TSCBCTHHHHHHHHHHHH
T ss_pred             c-cCC-CceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcC---CCccChHHHHHHHHHHHH
Confidence            1 112 244443 799999999954 6677776  456788899999999999997532   567999999999999999


Q ss_pred             hhhhcccccchH--HHHHHHHHHHHHHHhcCC---CcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhC
Q 036686          190 ICLCFGAKISEE--RIKHIESILKDVMLITSP---QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG  264 (508)
Q Consensus       190 ~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (508)
                      +.++||.+++..  ....+.+.+.........   .+...+|++...+....++..++.+.+.+++.+.++++++...  
T Consensus       162 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--  239 (477)
T 1r9o_A          162 CSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMD--  239 (477)
T ss_dssp             HHHHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred             HHHHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence            999999987432  223333333333322221   1223456533222222345566677888888888888776321  


Q ss_pred             CCCCCCCccccccchhhHHhhhcCCC----CCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHH
Q 036686          265 QNPNSESEMVSPIGAAYVDSLFGLEP----TGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKE  340 (508)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~E  340 (508)
                            .+ ...   |+++.++....    .....++++++.+++.++++||+|||+++++|++++|++||++|+++++|
T Consensus       240 ------~~-~~~---d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~E  309 (477)
T 1r9o_A          240 ------MN-NPQ---DFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEE  309 (477)
T ss_dssp             ------TT-CCC---SHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             ------CC-Cch---HHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence                  01 112   77777774311    11236899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCC
Q 036686          341 IVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE  420 (508)
Q Consensus       341 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  420 (508)
                      |++++++++.++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|+||++
T Consensus       310 i~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~  389 (477)
T 1r9o_A          310 IERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEM  389 (477)
T ss_dssp             HHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTS
T ss_pred             HHHhcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccc
Confidence            99999887789999999999999999999999999997688999999999999999999999999999999999999999


Q ss_pred             CCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCC-CCCc-ccceeeeec
Q 036686          421 FRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPP-DPTE-TYAFTVVMK  498 (508)
Q Consensus       421 F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~-~~~~-~~~~~~~~~  498 (508)
                      |+||||++++++.     .....|+|||+|+|+|+|++||++|+++++++|+++|++++.++.+. .... ..+++..| 
T Consensus       390 F~PeR~l~~~~~~-----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-  463 (477)
T 1r9o_A          390 FDPHHFLDEGGNF-----KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-  463 (477)
T ss_dssp             CCGGGGBCTTSCB-----CCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-
T ss_pred             cCccceECCCCCc-----CccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-
Confidence            9999999764321     13568999999999999999999999999999999999998875421 2222 44556665 


Q ss_pred             CceeEEeecC
Q 036686          499 NSLKAVILPR  508 (508)
Q Consensus       499 ~~~~v~~~~r  508 (508)
                      .+++|++++|
T Consensus       464 ~~~~~~~~~R  473 (477)
T 1r9o_A          464 PFYQLCFIPI  473 (477)
T ss_dssp             CCCCEEEEEC
T ss_pred             CCeEEEEEEe
Confidence            7899999987


No 11 
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=7.3e-75  Score=566.34  Aligned_cols=450  Identities=21%  Similarity=0.359  Sum_probs=354.1

Q ss_pred             CCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceE
Q 036686           32 NLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRL  111 (508)
Q Consensus        32 ~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~  111 (508)
                      +.||||+++|++||++.+.  ..+.+..+.+++++||+||++++++.+.++|+||+.+++|+.++...|.+++....+..
T Consensus        10 ~~pPgP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~   87 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLN--TEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW   87 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCC--TTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred             CCCCCCCCCcccccHhhcC--CcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence            5689999999999998762  34677889999999999999999999999999999999999776667766543211111


Q ss_pred             EeecCccceeeCCCChhHHHHHHHhHhhhcChhhh--hhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhh
Q 036686          112 VFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRV--KQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSIL  189 (508)
Q Consensus       112 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~  189 (508)
                       ...+ .++.+. +|+.|+++|+.+ .+.|++..+  +.+.+.+.++++.+++.+....   ++.+|+.+++..++++++
T Consensus        88 -~~~~-~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~---~~~vd~~~~~~~~~~~vi  160 (476)
T 2fdv_A           88 -VFKG-YGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGTG---GANIDPTFFLSRTVSNVI  160 (476)
T ss_dssp             -HHTT-CSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTT---TCCBCCHHHHHHHHHHHH
T ss_pred             -hcCC-CCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcC---CCccChHHHHHHHHHHHH
Confidence             1112 244444 799999999955 678877666  6788999999999999997532   567999999999999999


Q ss_pred             hhhhcccccch--HHHHHHHHHHHHHHHhcCC---CcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhC
Q 036686          190 ICLCFGAKISE--ERIKHIESILKDVMLITSP---QLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKG  264 (508)
Q Consensus       190 ~~~~fg~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (508)
                      +.++||.+++.  .....+.+.+..+......   .+...+|++...+....++..++.+.+.+++.+.++++++...  
T Consensus       161 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--  238 (476)
T 2fdv_A          161 SSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLD--  238 (476)
T ss_dssp             HHHHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred             HHHHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            99999998752  2233344444444332221   0122455422222223455667777888888888887765321  


Q ss_pred             CCCCCCCccccccchhhHHhhhcCCCC----CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHH
Q 036686          265 QNPNSESEMVSPIGAAYVDSLFGLEPT----GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKE  340 (508)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~E  340 (508)
                            .+ ...   |+++.+++...+    .+..++++++.++++.+++||+|||+++++|++++|++||++|+++|+|
T Consensus       239 ------~~-~~~---d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E  308 (476)
T 2fdv_A          239 ------PN-SPR---DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEE  308 (476)
T ss_dssp             ------TT-SCC---SHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             ------CC-CCc---cHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence                  01 112   788888764211    1236899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCC
Q 036686          341 IVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE  420 (508)
Q Consensus       341 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  420 (508)
                      |++++++++.++++++++||||+|||+|+||++|+++..++|.+++|++++|+.|||||.|+++.+++||||++|+||++
T Consensus       309 i~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~  388 (476)
T 2fdv_A          309 IDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQD  388 (476)
T ss_dssp             HHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTS
T ss_pred             HHHhhcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccc
Confidence            99999887779999999999999999999999999997688999999999999999999999999999999999999999


Q ss_pred             CCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCC-CCCCc-ccceeeeec
Q 036686          421 FRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAP-PDPTE-TYAFTVVMK  498 (508)
Q Consensus       421 F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~-~~~~~-~~~~~~~~~  498 (508)
                      ||||||++++.+.     .....|+|||+|+|.|+|++||++|+++++++|+++|++++.++.. ++... ..+++..| 
T Consensus       389 F~PeR~l~~~~~~-----~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-  462 (476)
T 2fdv_A          389 FNPQHFLNEKGQF-----KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-  462 (476)
T ss_dssp             CCGGGGBCTTSCB-----CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-
T ss_pred             cCchhhCCCCCCC-----CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-
Confidence            9999999764321     1356899999999999999999999999999999999999887642 12223 44556665 


Q ss_pred             CceeEEeecC
Q 036686          499 NSLKAVILPR  508 (508)
Q Consensus       499 ~~~~v~~~~r  508 (508)
                      .+++|++++|
T Consensus       463 ~~~~v~~~~R  472 (476)
T 2fdv_A          463 RNYTMSFLPR  472 (476)
T ss_dssp             CCCCEEEEEC
T ss_pred             CceEEEEEec
Confidence            7899999987


No 12 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=9.2e-75  Score=565.61  Aligned_cols=449  Identities=22%  Similarity=0.338  Sum_probs=350.3

Q ss_pred             CCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceE
Q 036686           32 NLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRL  111 (508)
Q Consensus        32 ~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~  111 (508)
                      +.||||+++|++|+++.+  ...+.+..+.+++++||+||++++|+.+.++|+||+.+++|+.++...|.+++....+..
T Consensus        10 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~   87 (476)
T 1po5_A           10 KLPPGPSPLPVLGNLLQM--DRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDP   87 (476)
T ss_dssp             CCCCCSCCBTTTBTGGGC--CTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCS
T ss_pred             CCCcCCCCCCccccHHhc--cCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHh
Confidence            568999999999999876  235677889999999999999999999999999999999999776667776543221211


Q ss_pred             EeecCccceeeCCCChhHHHHHHHhHhhhcChh--hhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhh
Q 036686          112 VFSVGKCAINSAEYGPLWRSLRRNFVTELITPT--RVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSIL  189 (508)
Q Consensus       112 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~  189 (508)
                      . ..+ .++.+. +|+.|+++||.+ .+.|++.  ..+.+.+.+.++++.+++.+....   ++.+|+.+++..++++++
T Consensus        88 ~-~~~-~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~---~~~~d~~~~~~~~~~~vi  160 (476)
T 1po5_A           88 I-FQG-YGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKSK---GALLDNTLLFHSITSNII  160 (476)
T ss_dssp             C-CSS-CCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTT---TCCBCCHHHHHHHHHHHH
T ss_pred             h-cCC-CceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcC---CCccCHHHHHHHHHHHHH
Confidence            1 112 244444 799999999954 6677766  456788899999999999997632   567999999999999999


Q ss_pred             hhhhcccccchHHHHHHHHHHHHHHHhcCC---C---cccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          190 ICLCFGAKISEERIKHIESILKDVMLITSP---Q---LPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       190 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      +.++||.+++... ..+......+......   .   +...+|++...+....++..+..+.+.+++.+.++++++... 
T Consensus       161 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-  238 (476)
T 1po5_A          161 CSIVFGKRFDYKD-PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLD-  238 (476)
T ss_dssp             HHHHHSSCCCTTC-HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCSHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred             HHHHcCCCCCCCC-HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            9999999875322 1233333322222211   1   112345422222222345566677888888888888765321 


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCC----CCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEP----TGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK  339 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~  339 (508)
                             .+ ...   |+++.++....    +....++++++.+++.++++||+|||+++++|++++|++||++|+++|+
T Consensus       239 -------~~-~~~---d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~  307 (476)
T 1po5_A          239 -------PS-NPR---DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQK  307 (476)
T ss_dssp             -------TT-SCC---SHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             -------CC-Ccc---cHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHH
Confidence                   01 112   77777774321    1122578999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCC
Q 036686          340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPG  419 (508)
Q Consensus       340 Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  419 (508)
                      ||+++++.++.++++++++||||+|||+|+|||+|+++..++|.+++|++++||.|||||.|+++.+++||||++|+||+
T Consensus       308 Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~  387 (476)
T 1po5_A          308 EIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPN  387 (476)
T ss_dssp             HHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTT
T ss_pred             HHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCcc
Confidence            99999988778999999999999999999999999999767899999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCC-CCCCc-ccceeeee
Q 036686          420 EFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAP-PDPTE-TYAFTVVM  497 (508)
Q Consensus       420 ~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~-~~~~~-~~~~~~~~  497 (508)
                      +|+||||++++++.     .....|+|||+|+|.|+|++||++|+++++++|+++|++++.++.+ +.... ..+++..|
T Consensus       388 ~F~PeR~l~~~~~~-----~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p  462 (476)
T 1po5_A          388 TFNPGHFLDANGAL-----KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP  462 (476)
T ss_dssp             SCCGGGGBCTTSCB-----CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC
T ss_pred             ccCchhhCCCCCCc-----cCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC
Confidence            99999999764321     1356899999999999999999999999999999999999887543 12223 44566665


Q ss_pred             cCceeEEeecC
Q 036686          498 KNSLKAVILPR  508 (508)
Q Consensus       498 ~~~~~v~~~~r  508 (508)
                       .+++|++++|
T Consensus       463 -~~~~v~~~~R  472 (476)
T 1po5_A          463 -PSYQIRFLAR  472 (476)
T ss_dssp             -CCCCBEEEEC
T ss_pred             -cceEEEEEec
Confidence             7899999987


No 13 
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=1.1e-75  Score=574.56  Aligned_cols=448  Identities=23%  Similarity=0.330  Sum_probs=343.7

Q ss_pred             CCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhc-CCCcCCCCCCCCce
Q 036686           32 NLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQR-GPEFASRPPDSPIR  110 (508)
Q Consensus        32 ~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~-~~~~~~~~~~~~~~  110 (508)
                      ..||||+++|++||++.+..   +.+..+.+|+++||+||++++|+.++++|+||+.++++|.++ ...|..++......
T Consensus        14 ~~~PGP~~~PliGn~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~   90 (485)
T 3nxu_A           14 LGIPGPTPLPFLGNILSYHK---GFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG   90 (485)
T ss_dssp             HTCCCCCCBTTTBTGGGGGG---CHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG
T ss_pred             CCCCCCCCcCeecCcHHhhc---ChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc
Confidence            34899999999999988743   567778999999999999999999999999999999999876 45666654432211


Q ss_pred             EEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhh
Q 036686          111 LVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILI  190 (508)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~  190 (508)
                       .   ...++.. .+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+...... ++++|+..++..+++|+++
T Consensus        91 -~---~~~~l~~-~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~-g~~~d~~~~~~~~~~dvi~  163 (485)
T 3nxu_A           91 -F---MKSAISI-AEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAET-GKPVTLKDVFGAYSMDVIT  163 (485)
T ss_dssp             -G---GGGSTTT-CCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEHHHHHHHHHHHHHH
T ss_pred             -c---cccCccc-cCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCcCcHHHHHHHHHHHHHH
Confidence             1   1223333 4799999999955 789999999999999999999999999765443 6789999999999999999


Q ss_pred             hhhcccccchHH--HHHHHHHHHHHHHhcCC----CcccccccchhhhHhHH--HHHHHHHHHHHHHhHHHHHHHHHHHh
Q 036686          191 CLCFGAKISEER--IKHIESILKDVMLITSP----QLPDFLPILTPLFRRQM--REAKELRKRQMECLVPLIRNRKAFVE  262 (508)
Q Consensus       191 ~~~fg~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~p~l~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (508)
                      .++||.+++...  ...+.+....+......    .....+|++.++.....  .......+.+.+.+.+.++++.+.  
T Consensus       164 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  241 (485)
T 3nxu_A          164 STSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED--  241 (485)
T ss_dssp             HHHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc--
Confidence            999999985421  11122211111100000    01122343322211100  000122223333334433333221  


Q ss_pred             hCCCCCCCCccccccchhhHHhhhcCCCCC----CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHH
Q 036686          263 KGQNPNSESEMVSPIGAAYVDSLFGLEPTG----REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLY  338 (508)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr  338 (508)
                              ......   |+++.+++....+    ...++++++.++++.+++||+|||+++++|++++|++||++|++++
T Consensus       242 --------~~~~~~---d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~  310 (485)
T 3nxu_A          242 --------TQKHRV---DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQ  310 (485)
T ss_dssp             --------C---CC---CHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             --------cCCCcc---cHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence                    111112   7888887643221    2369999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCC
Q 036686          339 KEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDP  418 (508)
Q Consensus       339 ~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p  418 (508)
                      +|+++++++++.++++++++||||+|||+|+||++|+++. ++|.+++|++++||.|||||.|+++.+++||||++|+||
T Consensus       311 ~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp  389 (485)
T 3nxu_A          311 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP  389 (485)
T ss_dssp             HHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSST
T ss_pred             HHHHHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCc
Confidence            9999999988889999999999999999999999999987 789999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeec
Q 036686          419 GEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMK  498 (508)
Q Consensus       419 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (508)
                      ++|+||||++++..     ..++..|+|||+|+|.|+|++||++|++++++.|+++|+++++++...+.......++.++
T Consensus       390 ~~F~PeR~l~~~~~-----~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~  464 (485)
T 3nxu_A          390 EKFLPERFSKKNKD-----NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPE  464 (485)
T ss_dssp             TSCCGGGGSHHHHT-----TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBS
T ss_pred             cCcCccccCCCccc-----cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCC
Confidence            99999999975431     1245689999999999999999999999999999999999998765444444556678888


Q ss_pred             CceeEEeecC
Q 036686          499 NSLKAVILPR  508 (508)
Q Consensus       499 ~~~~v~~~~r  508 (508)
                      .+++|++++|
T Consensus       465 ~~~~~~~~~r  474 (485)
T 3nxu_A          465 KPVVLKVESR  474 (485)
T ss_dssp             SCCEEEEEEC
T ss_pred             CCeEEEEEEc
Confidence            9999999987


No 14 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=1.3e-74  Score=564.70  Aligned_cols=455  Identities=22%  Similarity=0.338  Sum_probs=355.6

Q ss_pred             CCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI  109 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~  109 (508)
                      +.+.||||+++|++|+++.+.......+..+.+++++||+|+++++|+.++++|+||+.+++++.+++..|++++....+
T Consensus        10 ~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~   89 (481)
T 3czh_A           10 PMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLF   89 (481)
T ss_dssp             --CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHH
T ss_pred             CCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHH
Confidence            45679999999999999887543222677899999999999999999999999999999999998776678776533211


Q ss_pred             eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhh--hhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHh
Q 036686          110 RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRV--KQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICS  187 (508)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~  187 (508)
                      .. +. +..++.+..+|+.|+++|+.+ .+.|++..+  ..+.+.+.++++.+++.+....   ++.+|+..++..++++
T Consensus        90 ~~-~~-~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~---~~~~d~~~~~~~~~~~  163 (481)
T 3czh_A           90 MK-MT-KMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETYK---GRPFDFKQLITNAVSN  163 (481)
T ss_dssp             HH-HH-TTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTT---TCCBCCHHHHHHHHHH
T ss_pred             Hh-hc-CCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcC---CCCcCHHHHHHHHHHH
Confidence            11 11 112334445799999999855 677775543  5688889999999999987532   5679999999999999


Q ss_pred             hhhhhhcccccch--HHHHHHHHHHHHHHHhcCC-C--cccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 036686          188 ILICLCFGAKISE--ERIKHIESILKDVMLITSP-Q--LPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVE  262 (508)
Q Consensus       188 ~~~~~~fg~~~~~--~~~~~~~~~~~~~~~~~~~-~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (508)
                      +++.++||.+++.  .....+.+....+...... .  +...+|++..+.....++..+..+.+.+++.+.++++++...
T Consensus       164 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  243 (481)
T 3czh_A          164 ITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRK  243 (481)
T ss_dssp             HHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999998742  2233344444444433221 1  234466654332233456667777888888888888765321


Q ss_pred             hCCCCCCCCccccccchhhHHhhhcCCC----CCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHH
Q 036686          263 KGQNPNSESEMVSPIGAAYVDSLFGLEP----TGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLY  338 (508)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr  338 (508)
                              .+ ...   |+++.+++...    +.+..++++++.+++.++++||+|||+++++|++++|++||++|++++
T Consensus       244 --------~~-~~~---d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~  311 (481)
T 3czh_A          244 --------PQ-LPQ---HFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQ  311 (481)
T ss_dssp             --------TT-CCS---SHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             --------CC-chH---HHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHH
Confidence                    01 112   78888876421    112369999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCC
Q 036686          339 KEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDP  418 (508)
Q Consensus       339 ~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p  418 (508)
                      +|++++++.++.++++++++||||+|||+|+||++|+++..++|.+++|++++|+.|||||.|+++.+++||||++|+||
T Consensus       312 ~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP  391 (481)
T 3czh_A          312 KEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDP  391 (481)
T ss_dssp             HHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSST
T ss_pred             HHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCc
Confidence            99999999878899999999999999999999999999977789999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeec
Q 036686          419 GEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMK  498 (508)
Q Consensus       419 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (508)
                      ++||||||++++++     ...+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++...+.....+++.. +
T Consensus       392 ~~F~PeR~l~~~~~-----~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-p  465 (481)
T 3czh_A          392 EVFHPERFLDSSGY-----FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQ-P  465 (481)
T ss_dssp             TSCCGGGGBCTTSC-----BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCC-C
T ss_pred             cccCCCceeCCCCC-----CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceec-C
Confidence            99999999976431     12457899999999999999999999999999999999998876543333333455554 4


Q ss_pred             CceeEEeecC
Q 036686          499 NSLKAVILPR  508 (508)
Q Consensus       499 ~~~~v~~~~r  508 (508)
                      .++.++++||
T Consensus       466 ~~~~~~~~~~  475 (481)
T 3czh_A          466 QPYLICAERR  475 (481)
T ss_dssp             CCCCBEEEEC
T ss_pred             CceEEEEEec
Confidence            6789999987


No 15 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=2.7e-74  Score=565.08  Aligned_cols=457  Identities=18%  Similarity=0.217  Sum_probs=357.6

Q ss_pred             CCCCCCCCCCCCCCCccccchhhhhhh--cCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCC
Q 036686           26 TGGGPKNLPPGPRGWPLVGNLVQVILQ--RRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASR  103 (508)
Q Consensus        26 ~~~~~~~~ppgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~  103 (508)
                      +...|.+.+|||+++|+. +++.+...  ..+++..+.+++++||+||++++|+.+.|+|+||+.+++|+.++ ..|.++
T Consensus         3 r~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r   80 (487)
T 3n9y_A            3 RSPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPER   80 (487)
T ss_dssp             -CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCC
T ss_pred             CCCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCC
Confidence            345688889999998875 66666443  34688889999999999999999999999999999999999765 467666


Q ss_pred             CCCCCceE--EeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhh---ccCCccchhh
Q 036686          104 PPDSPIRL--VFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEA---FDNDLFVEVM  178 (508)
Q Consensus       104 ~~~~~~~~--~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~---~~~~~~vdl~  178 (508)
                      +....+..  ....+..++.. .+|+.|+++|+.+...+|+...++.+.+.+.++++.+++.+....   ..++..+|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~~-~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~  159 (487)
T 3n9y_A           81 FLIPPWVAYHQYYQRPIGVLL-KKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDIS  159 (487)
T ss_dssp             CCCHHHHHHHHHTTCCCCGGG-CCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCH
T ss_pred             CCCcHHHHHHHHccccCCCcc-CCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHH
Confidence            54322110  01112223333 479999999997644469999999999999999999999987643   1224579999


Q ss_pred             HHHHHHHHhhhhhhhcccccch------HHHHHHHHHHHHHHHhcCCCccccccc-ch-hhhHhHHHHHHHHHHHHHHHh
Q 036686          179 SSCRLTICSILICLCFGAKISE------ERIKHIESILKDVMLITSPQLPDFLPI-LT-PLFRRQMREAKELRKRQMECL  250 (508)
Q Consensus       179 ~~~~~~~~~~~~~~~fg~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~-l~-~~~~~~~~~~~~~~~~~~~~~  250 (508)
                      .++..+++|+++.++||.+++.      .....+.+....+......  ...+|. +. .+....++......+.+.+++
T Consensus       160 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~  237 (487)
T 3n9y_A          160 DDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP--MLNLPPDLFRLFRTKTWKDHVAAWDVIFSKA  237 (487)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG--GTTSCHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH--HHhcCHHHHhhcccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998842      2233444444444433321  122232 22 222233444455555666777


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhC
Q 036686          251 VPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLN  330 (508)
Q Consensus       251 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~  330 (508)
                      .+.++++.+...+...    .+....   |+++.+++.     +.++++++.+++..+++||+|||+++++|++++|++|
T Consensus       238 ~~~i~~~~~~~~~~~~----~~~~~~---d~l~~ll~~-----~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~  305 (487)
T 3n9y_A          238 DIYTQNFYWELRQKGS----VHHDYR---GILYRLLGD-----SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN  305 (487)
T ss_dssp             HHHHHHHHHHHHHHCC----CCSSCC---CHHHHHHHS-----CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhcCC----cccchH---HHHHHHHhc-----CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC
Confidence            7777766655432211    111112   788888864     2589999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEccccccc
Q 036686          331 QEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTE  410 (508)
Q Consensus       331 P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~  410 (508)
                      |++|+++++|+++++++++.++++++++||||+|||+|+|||+|+++. ++|.+++|++++||.|||||.|+++.+++||
T Consensus       306 P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~  384 (487)
T 3n9y_A          306 LKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGR  384 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHT
T ss_pred             hHHHHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcC
Confidence            999999999999999877767789999999999999999999999985 7899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcc
Q 036686          411 DPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTET  490 (508)
Q Consensus       411 d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  490 (508)
                      ||++|+||++|+||||++.+.+      .....|+|||+|+|.|+|++||++|+++++++|+++|++++.++.  +....
T Consensus       385 d~~~~~dp~~F~PeR~l~~~~~------~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~  456 (487)
T 3n9y_A          385 EPTFFFDPENFDPTRWLSKDKN------ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS--DVGTT  456 (487)
T ss_dssp             CTTTSSSTTSCCGGGGTCSCTT------SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC--CCCEE
T ss_pred             CcccCCCcccCChhhcCCCCCC------CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc--ccccc
Confidence            9999999999999999985431      235689999999999999999999999999999999999988763  33445


Q ss_pred             cceeeeecCceeEEeecC
Q 036686          491 YAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       491 ~~~~~~~~~~~~v~~~~r  508 (508)
                      .++++.|+++++|+++||
T Consensus       457 ~~~~~~p~~~~~~~~~~r  474 (487)
T 3n9y_A          457 FNLILMPEKPISFTFWPF  474 (487)
T ss_dssp             ESSSEEESSCCCEEEEEC
T ss_pred             eeeeecCCCCceeEEEEC
Confidence            567889999999999987


No 16 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=7.5e-74  Score=553.42  Aligned_cols=436  Identities=20%  Similarity=0.307  Sum_probs=345.7

Q ss_pred             CCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           28 GGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      .++.+.||||+++|++||++.+..++.    .+.+++++||+||+++++|.+.++|+||+.+++++.++...|+.... .
T Consensus         8 ~~~~~~pPgp~~~P~iG~~~~~~~~~~----~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~-~   82 (444)
T 2ve3_A            8 LNSLPIPPGDFGLPWLGETLNFLNDGD----FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP-L   82 (444)
T ss_dssp             -CCCCCCCCCCCBTTTBTHHHHHHCTT----HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC-H
T ss_pred             CCCCCCCCCCCCCCccccHHHHhcCcH----HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh-H
Confidence            345678999999999999988765432    57899999999999998888999999999999999766555652211 0


Q ss_pred             CceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHh
Q 036686          108 PIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICS  187 (508)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~  187 (508)
                      .....+  +..++.. .+|+.|+.+|+.+ .+.|++..++.+.+.+.++++.+++.+..     ++.+|+..++..++++
T Consensus        83 ~~~~~~--g~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~vd~~~~~~~~~~~  153 (444)
T 2ve3_A           83 STRILL--GPNALAT-QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWGK-----ANEVIWYPQLRRMTFD  153 (444)
T ss_dssp             HHHHHH--CTTSGGG-CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHHH-----SSEEEHHHHHHHHHHH
T ss_pred             HHHHHh--Ccccccc-CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhcC-----CCcEeHHHHHHHHHHH
Confidence            111111  2223434 4799999999855 78999999999999999999999999853     5689999999999999


Q ss_pred             hhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCC
Q 036686          188 ILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP  267 (508)
Q Consensus       188 ~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (508)
                      +++.++|| ....+. ..+.+.+..+...... +...+|..      .+++..++.+.+.+++.+.++++++..      
T Consensus       154 vi~~~~fG-~~~~~~-~~~~~~~~~~~~~~~~-~~~~~p~~------~~~~~~~~~~~~~~~~~~~i~~r~~~~------  218 (444)
T 2ve3_A          154 VAATLFMG-EKVSQN-PQLFPWFETYIQGLFS-LPIPLPNT------LFGKSQRARALLLAELEKIIKARQQQP------  218 (444)
T ss_dssp             HHHHHHTC-HHHHSC-TTHHHHHHHHHHHHSS-CCCCSTTS------HHHHHHHHHHHHHHHHHHHHHHHHTSC------
T ss_pred             HHHHHHcC-CCcccH-HHHHHHHHHHHHHHhc-CCccCCCc------HHHHHHHHHHHHHHHHHHHHHHHhcCC------
Confidence            99999999 332221 2333333333322221 12223321      133455666778888888888766521      


Q ss_pred             CCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC
Q 036686          268 NSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGK  347 (508)
Q Consensus       268 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~  347 (508)
                           ....   |+++.+++...+++..++++++.++++.+++||+|||+++++|++++|++||++|+++|+|++.++++
T Consensus       219 -----~~~~---d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~  290 (444)
T 2ve3_A          219 -----PSEE---DALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS  290 (444)
T ss_dssp             -----CCCS---SHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCS
T ss_pred             -----CCcc---CHHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccC
Confidence                 1112   89999987654333469999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCccc
Q 036686          348 DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL  427 (508)
Q Consensus       348 ~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l  427 (508)
                      + .++++++++||||+|||+|+||++|+++. +.|.+++|++++||.|||||.|+++.+++||||++|+||++||||||+
T Consensus       291 ~-~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l  368 (444)
T 2ve3_A          291 Q-ELTAETLKKMPYLDQVLQEVLRLIPPVGG-GFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFT  368 (444)
T ss_dssp             S-CCCHHHHTTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSS
T ss_pred             C-CCChhhhhcChHHHHHHHHHHhcCCCccC-ccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccC
Confidence            5 78999999999999999999999999997 579999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          428 EGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                      +++...    ..++..|+|||+|+|.|+|++||++|+++++++|+++|++++.++...  ......++.++++++|++++
T Consensus       369 ~~~~~~----~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~l~v~~~~  442 (444)
T 2ve3_A          369 PDGSAT----HNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNL--ELVVTPSPRPKDNLRVKLHS  442 (444)
T ss_dssp             TTSTTT----TSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCC--CEEESSSEEETTCCEEEEEE
T ss_pred             CCCccc----CCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCc--ceeccccccCCCCceEEEEe
Confidence            764311    123467999999999999999999999999999999999998865432  23445677888999999998


Q ss_pred             C
Q 036686          508 R  508 (508)
Q Consensus       508 r  508 (508)
                      |
T Consensus       443 r  443 (444)
T 2ve3_A          443 L  443 (444)
T ss_dssp             C
T ss_pred             C
Confidence            7


No 17 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=3.2e-73  Score=550.77  Aligned_cols=442  Identities=18%  Similarity=0.228  Sum_probs=333.1

Q ss_pred             CCCCC-CCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCce
Q 036686           32 NLPPG-PRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIR  110 (508)
Q Consensus        32 ~~ppg-P~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~  110 (508)
                      +.||| |.++|++||++.+.   .+.+..+.+++++||+||++++++.++++|+||+.+++++.++...|+.++......
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~---~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~   80 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFR---TDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMT   80 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHT---TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGH
T ss_pred             CCCCCCCCCCCCccCHHHHh---hChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHH
Confidence            46887 88999999998874   346677999999999999999999999999999999999977656676655432111


Q ss_pred             EEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhh
Q 036686          111 LVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILI  190 (508)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~  190 (508)
                      ..++  . ++..  +++.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+..     ++.+|+..++..+++++++
T Consensus        81 ~~~g--~-~~~~--~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~~-----~~~vd~~~~~~~~~~~vi~  149 (455)
T 2cib_A           81 PIFG--E-GVVF--DASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWGE-----AGEIDLLDFFAELTIYTSS  149 (455)
T ss_dssp             HHHC--------------------------CCHHHHHHHHHHHHHHHHHHHTTCCS-----EEEEEHHHHHHHHHHHHHH
T ss_pred             hhcC--C-cccc--CcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhCC-----CCcEeHHHHHHHHHHHHHH
Confidence            1112  1 2332  589999999855 78999999999999999999999887642     4579999999999999999


Q ss_pred             hhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCC
Q 036686          191 CLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSE  270 (508)
Q Consensus       191 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  270 (508)
                      .++||.+++......+.+....+.... ..+..++|++.   ....++..++.+.+.+++.+.++++++...        
T Consensus       150 ~~~fG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~l~---~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--------  217 (455)
T 2cib_A          150 ACLIGKKFRDQLDGRFAKLYHELERGT-DPLAYVDPYLP---IESFRRRDEARNGLVALVADIMNGRIANPP--------  217 (455)
T ss_dssp             HHHTCHHHHTTCCHHHHHHHHHHHTTC-CGGGGTCTTCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred             HHHcCCCcchhhhHHHHHHHHHHHhhh-hHHHHhcccCC---ChhHHHHHHHHHHHHHHHHHHHHHHHhccc--------
Confidence            999999874321234444444432211 12222345432   122344556677788888888888765321        


Q ss_pred             CccccccchhhHHhhhcCCCCCCCC-CCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCC
Q 036686          271 SEMVSPIGAAYVDSLFGLEPTGREQ-LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG  349 (508)
Q Consensus       271 ~~~~~~~~~~~~~~ll~~~~~~~~~-l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~  349 (508)
                      ......   |+++.+++...+++.. ++++++.++++.+++||+|||+++++|++++|++||++|+++|+|+++++++++
T Consensus       218 ~~~~~~---dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  294 (455)
T 2cib_A          218 TDKSDR---DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGR  294 (455)
T ss_dssp             ----CC---CHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCC
T ss_pred             CCCCcc---cHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence            011112   7899998765333334 899999999999999999999999999999999999999999999999998877


Q ss_pred             CCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCC
Q 036686          350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEG  429 (508)
Q Consensus       350 ~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~  429 (508)
                      .++++++++||||+|||+|+||++|+++. ++|.+++|++++||.|||||.|+++.+++||||++|+||++||||||+++
T Consensus       295 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~  373 (455)
T 2cib_A          295 SVSFHALRQIPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQP  373 (455)
T ss_dssp             CHHHHTTSCCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTT
T ss_pred             CCCHHHHhcCHHHHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCC
Confidence            78899999999999999999999999886 68999999999999999999999999999999999999999999999976


Q ss_pred             CCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCC-cccceeeeecCceeEEeecC
Q 036686          430 DGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPT-ETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       430 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +...    ..++..|+|||+|+|.|+|++||++|+++++++|+++|++++..+. .++. ....++..++.+++|++++|
T Consensus       374 ~~~~----~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~p~~~~~v~~~~R  448 (455)
T 2cib_A          374 RQED----LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPP-ESYRNDHSKMVVQLAQPAAVRYRRR  448 (455)
T ss_dssp             TCHH----HHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCG-GGCCEECSSSSCEECSCCEEEEEEC
T ss_pred             Cccc----ccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCc-cccccccccccccCCCCceEEEEEC
Confidence            4311    0125679999999999999999999999999999999999987321 1221 11345667777999999987


No 18 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=1.4e-72  Score=547.65  Aligned_cols=439  Identities=21%  Similarity=0.317  Sum_probs=355.0

Q ss_pred             CCCCCCCC-CccccchhhhhhhcCchHHHHHHHHHHhC-CeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc
Q 036686           32 NLPPGPRG-WPLVGNLVQVILQRRHFIFIVRDLRKKYG-PIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI  109 (508)
Q Consensus        32 ~~ppgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~  109 (508)
                      +.||||++ +|++||++.+..   +.+..+.+++++|| +||++++++.++++|+||+.+++++.++...|+.++.....
T Consensus         3 ~~PPg~p~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~   79 (450)
T 3gw9_A            3 KLPPVYPVTVPILGHIIQFGK---SPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFM   79 (450)
T ss_dssp             SCCCBCCCCSTTTBTHHHHHH---CHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGG
T ss_pred             CCCCCCCCCcchhccHHHHcc---CHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHH
Confidence            46888655 999999988754   46677899999999 99999999999999999999999998877777766543322


Q ss_pred             eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHH-HHHHhhccCCccchhhHHHHHHHHhh
Q 036686          110 RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMK-RLNSEAFDNDLFVEVMSSCRLTICSI  188 (508)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~-~l~~~~~~~~~~vdl~~~~~~~~~~~  188 (508)
                      ...++.   ++.+..+++.|+++|+.+ .+.|+...++.+.+.+.+++..+++ .+..    .++.+|+..++..+++++
T Consensus        80 ~~~~g~---~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~----~~~~vd~~~~~~~~~~~~  151 (450)
T 3gw9_A           80 VPVFGE---GVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDK----DEGEINLLEDCSTMIINT  151 (450)
T ss_dssp             HHHHCT---TSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCS----SEEEEEHHHHHHHHHHHH
T ss_pred             HHHhcC---CcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhcc----CCCcccHHHHHHHHHHHH
Confidence            222222   333334799999999855 7899999999999999999999988 5532    155799999999999999


Q ss_pred             hhhhhcccccchHH-HHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCC
Q 036686          189 LICLCFGAKISEER-IKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP  267 (508)
Q Consensus       189 ~~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (508)
                      ++.++||.+++... ...+.+.+..+.... ..+...+|++..+.....++..++.+.+.+++.+.++++++....    
T Consensus       152 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~----  226 (450)
T 3gw9_A          152 ACQCLFGEDLRKRLDARRFAQLLAKMESSL-IPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN----  226 (450)
T ss_dssp             HHHHHSCHHHHHHSCHHHHHHHHHHHHHTC-CGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred             HHHHHcCcchhhhhhhHHHHHHHHHHHhcc-ccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc----
Confidence            99999999875322 344555554443322 233445676654444445566777888899999999888764321    


Q ss_pred             CCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHh--hChHHHHHHHHHHHHHh
Q 036686          268 NSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLV--LNQEIQEKLYKEIVAAV  345 (508)
Q Consensus       268 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~--~~P~~~~~lr~Ei~~~~  345 (508)
                         ++....   |+++.+++...+++..++++++.++++.+++||+|||+++++|++++|+  .||++|+++|+|++++ 
T Consensus       227 ---~~~~~~---d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~-  299 (450)
T 3gw9_A          227 ---KDSSTS---DLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF-  299 (450)
T ss_dssp             ---TSCCCC---SHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC-
T ss_pred             ---cCCccc---hHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc-
Confidence               111122   8999999875444447999999999999999999999999999999999  9999999999999998 


Q ss_pred             cCCCCCCcccc-cCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCC
Q 036686          346 GKDGLVKEEDV-EKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPE  424 (508)
Q Consensus       346 ~~~~~~~~~~~-~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  424 (508)
                        ++.++++++ ++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       300 --~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~Pe  376 (450)
T 3gw9_A          300 --PAQLNYNNVMDEMPFAERCARESIRRDPPLLM-LMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE  376 (450)
T ss_dssp             --CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTT
T ss_pred             --cCCCChHHHHHhcHHHHHHHHHHHHhCCchhc-cccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCC
Confidence              456788999 9999999999999999999987 579999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeec-CceeE
Q 036686          425 RFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMK-NSLKA  503 (508)
Q Consensus       425 R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v  503 (508)
                      |+..           .+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++..++. ....++..++ .+++|
T Consensus       377 R~~~-----------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~v  444 (450)
T 3gw9_A          377 RDEK-----------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP-DYHTMVVGPTASQCRV  444 (450)
T ss_dssp             CCCS-----------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCE-ETTSSSCEECGGGCEE
T ss_pred             cCcC-----------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCC-ccccceecCCCCceEe
Confidence            9211           246799999999999999999999999999999999999986543222 2345667777 79999


Q ss_pred             EeecC
Q 036686          504 VILPR  508 (508)
Q Consensus       504 ~~~~r  508 (508)
                      ++++|
T Consensus       445 ~~~~R  449 (450)
T 3gw9_A          445 KYIRR  449 (450)
T ss_dssp             EEEEC
T ss_pred             Eeeec
Confidence            99998


No 19 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1.5e-71  Score=541.08  Aligned_cols=442  Identities=18%  Similarity=0.241  Sum_probs=340.1

Q ss_pred             CCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceE
Q 036686           32 NLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRL  111 (508)
Q Consensus        32 ~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~  111 (508)
                      +.||||+++|++||++.+.  ..+.+..+.+++++||+||++++++.+.++|+||+.+++|+.+  ..|.+... .....
T Consensus         3 ~~~PGP~~~p~iG~l~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~-~~~~~   77 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLN--TDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLS-QALKF   77 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGC--SSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCC-HHHHH
T ss_pred             CCCCCCCCCCccccHHHHh--cccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCch-hHHHH
Confidence            4689999999999998863  2456777899999999999999999999999999999999943  24533211 11110


Q ss_pred             EeecCccceeeC-CCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhh
Q 036686          112 VFSVGKCAINSA-EYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILI  190 (508)
Q Consensus       112 ~~~~~~~~~~~~-~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~  190 (508)
                      .....+.++.+. .+|+.|+++||.+ .+.|++..++.+.+.+.++++.+++.+....  .++.+|+..++..+++++++
T Consensus        78 ~~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~--~~~~vd~~~~~~~~~~~vi~  154 (470)
T 2ij2_A           78 VRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN--ADEHIEVPEDMTRLTLDTIG  154 (470)
T ss_dssp             HHHHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTCC--TTCCEEHHHHHHHHHHHHHH
T ss_pred             HHHhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCeEEHHHHHHHHHHHHHH
Confidence            000011234443 4799999999965 7899999999999999999999999987532  25679999999999999999


Q ss_pred             hhhcccccchH---HHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCC
Q 036686          191 CLCFGAKISEE---RIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP  267 (508)
Q Consensus       191 ~~~fg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (508)
                      .++||.+++..   ....+.......+....... ...|++..+.....++..+..+.+.+++.+.++++++..      
T Consensus       155 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------  227 (470)
T 2ij2_A          155 LCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKL-QRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASG------  227 (470)
T ss_dssp             HHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC----CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHcCCcccccccCCCCHHHHHHHHHHHHHHHHH-hhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence            99999987532   11222222222221111000 001222222233344556667778888888888776531      


Q ss_pred             CCCCccccccchhhHHhhhcCCCCC-CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhc
Q 036686          268 NSESEMVSPIGAAYVDSLFGLEPTG-REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG  346 (508)
Q Consensus       268 ~~~~~~~~~~~~~~~~~ll~~~~~~-~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~  346 (508)
                        .   ...   |+++.+++...++ +..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++++++
T Consensus       228 --~---~~~---dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  299 (470)
T 2ij2_A          228 --E---QSD---DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV  299 (470)
T ss_dssp             --C---CCS---SHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_pred             --c---Cch---hHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence              0   112   8999999765432 236999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCC-eeeCCCCEEEEcccccccCCCCC-CCCCCCCCC
Q 036686          347 KDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGG-YSIPAGVHVEFYTAWLTEDPDMW-SDPGEFRPE  424 (508)
Q Consensus       347 ~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~  424 (508)
                      ++ .++++++++||||+|||+|+||++|+++. +.|.+.+|++++| |.|||||.|+++.+++||||++| +||++|+||
T Consensus       300 ~~-~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  377 (470)
T 2ij2_A          300 DP-VPSYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE  377 (470)
T ss_dssp             SS-SCCHHHHHTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGG
T ss_pred             CC-CCCHHHHhCCHHHHHHHHHHHhcCCCccc-cceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcc
Confidence            64 58999999999999999999999999997 5799999999999 99999999999999999999999 999999999


Q ss_pred             cccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEE
Q 036686          425 RFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAV  504 (508)
Q Consensus       425 R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  504 (508)
                      || +. .     ...++..|+|||+|+|.|+|++||++|+++++++|+++|+++ .++ ..+......++..++ +++|+
T Consensus       378 R~-~~-~-----~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~-~~~~~~~~~~~~~p~-~~~v~  447 (470)
T 2ij2_A          378 RF-EN-P-----SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHT-NYELDIKETLTLKPE-GFVVK  447 (470)
T ss_dssp             GG-SS-G-----GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTT-CCCCCEEESSSEEET-TCEEE
T ss_pred             cc-CC-C-----CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCC-CCccccccceEecCC-CeEEE
Confidence            99 22 1     112346899999999999999999999999999999999998 322 122333345567776 99999


Q ss_pred             eecC
Q 036686          505 ILPR  508 (508)
Q Consensus       505 ~~~r  508 (508)
                      +++|
T Consensus       448 ~~~R  451 (470)
T 2ij2_A          448 AKSK  451 (470)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9987


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=3e-72  Score=546.55  Aligned_cols=435  Identities=22%  Similarity=0.332  Sum_probs=323.1

Q ss_pred             CCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCc-CCCCCCCCc
Q 036686           31 KNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEF-ASRPPDSPI  109 (508)
Q Consensus        31 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~-~~~~~~~~~  109 (508)
                      ..+||||+++|++||++.+..   +.+..+.++++ ||+||++++++.++++|+||+.+++++.++  .| .+.+.....
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~---~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~   95 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLAR---DPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESL   95 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHH---CHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC----------
T ss_pred             CCCCCCCCCCCcccchHHhcc---CHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHH
Confidence            567899999999999998865   45666888887 999999999999999999999999999765  55 333222222


Q ss_pred             eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhh
Q 036686          110 RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSIL  189 (508)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~  189 (508)
                      ...++  ..++.. .+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+..     ++.+|+..++..++++++
T Consensus        96 ~~~~g--~~~l~~-~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~vi  166 (467)
T 3dbg_A           96 EGLLG--KEGVAT-ANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQP-----GKTVDATSESFRVAVRVA  166 (467)
T ss_dssp             -----------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSCT-----TSCEEHHHHHHHHHHHHH
T ss_pred             HHhcC--CCCccc-CCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhcc-----CCcCcHHHHHHHHHHHHH
Confidence            22222  123433 4799999999855 78999999999999999999999998853     568999999999999999


Q ss_pred             hhhhcccccchHHHHHHHHHHHHHHHhcCCCccccccc--chhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCC
Q 036686          190 ICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPI--LTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP  267 (508)
Q Consensus       190 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (508)
                      +.++||.+++.+....+......+......  ...+|+  +..+.....++..++.+.+.+++.+.++++++..      
T Consensus       167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------  238 (467)
T 3dbg_A          167 ARCLLRGQYMDERAERLCVALATVFRGMYR--RMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASG------  238 (467)
T ss_dssp             HHHHSCSSCCHHHHHHHHHHHHHHHHC--------------------------CCHHHHHHHHHHHHHHHTTCC------
T ss_pred             HHHHhCCcccchhHHHHHHHHHHHHHHHHH--HhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcC------
Confidence            999999998765555566655555443221  112332  2222222334455666777778888877765421      


Q ss_pred             CCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC
Q 036686          268 NSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGK  347 (508)
Q Consensus       268 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~  347 (508)
                           ....   |+++.+++...++++.++++++.++++.+++||+|||+++++|++++|++||++|+++|+|++.++++
T Consensus       239 -----~~~~---dll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~  310 (467)
T 3dbg_A          239 -----QKPD---DLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG  310 (467)
T ss_dssp             -----SSCC---SHHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT
T ss_pred             -----CCch---HHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence                 1112   89999998755444469999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCccc
Q 036686          348 DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL  427 (508)
Q Consensus       348 ~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l  427 (508)
                       +.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|||+||+
T Consensus       311 -~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl  388 (467)
T 3dbg_A          311 -RPVAFEDVRKLRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWL  388 (467)
T ss_dssp             -SCCCHHHHTTCHHHHHHHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGS
T ss_pred             -CCCCHHHHhhCHHHHHHHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCC
Confidence             678999999999999999999999999987 689999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEee
Q 036686          428 EGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVIL  506 (508)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  506 (508)
                      +++.+     ..+...|+|||+|+|.|+|++||++|++++++.|+++|++++.++..  .....+.+++|+ +++++-.
T Consensus       389 ~~~~~-----~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~p~-~l~~~~~  459 (467)
T 3dbg_A          389 PERAA-----NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN--DAVRVGITLRPH-DLLVRPV  459 (467)
T ss_dssp             HHHHT-----TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCE--EEEEESSSEEEE-ECEEEEE
T ss_pred             CCccc-----cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCC--CccceeeEecCC-CCccchh
Confidence            75321     12456899999999999999999999999999999999999987643  233455667665 5666543


No 21 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=1.7e-70  Score=533.25  Aligned_cols=424  Identities=22%  Similarity=0.294  Sum_probs=336.1

Q ss_pred             CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC-CceEEeec--CccceeeCCCChhHH
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS-PIRLVFSV--GKCAINSAEYGPLWR  130 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~w~  130 (508)
                      ...+..+.+|+++||+||++++|+.+.++|+||+.+++||.+  ..|.+.+... .....++.  .+.++.+..+|+.|+
T Consensus        10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~   87 (456)
T 3mdm_A           10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH   87 (456)
T ss_dssp             CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred             chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence            457778999999999999999999999999999999999953  3344332111 11111110  112344445799999


Q ss_pred             HHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhcccccchHH--HHHHHH
Q 036686          131 SLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEER--IKHIES  208 (508)
Q Consensus       131 ~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~--~~~~~~  208 (508)
                      ++||.+ .+.|++..++.+.+.+.+.++.+++.+...... +.++|+..++..+++|+++.++||.+++...  ...+..
T Consensus        88 ~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~-~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  165 (456)
T 3mdm_A           88 KQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKADG-QTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQ  165 (456)
T ss_dssp             HHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSS-SSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHH
T ss_pred             HHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHH
Confidence            999955 789999999999999999999999999875443 6789999999999999999999999885321  122222


Q ss_pred             HHHHHHHhcC---CCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhh
Q 036686          209 ILKDVMLITS---PQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSL  285 (508)
Q Consensus       209 ~~~~~~~~~~---~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (508)
                      ....+.....   ..+..++|.    ..+..+...+..+.+.+++.+.++++++....+       +....   |+++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-------~~~~~---d~l~~l  231 (456)
T 3mdm_A          166 AVKLMLEGITASRNTLAKFLPG----KRKQLREVRESIRFLRQVGRDWVQRRREALKRG-------EEVPA---DILTQI  231 (456)
T ss_dssp             HHHHHHHHHHHHHHSCGGGCGG----GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------CCCCC---CHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-------ccchh---hHHHHH
Confidence            2222221111   012222232    122234555666777788888888887765311       11122   789998


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHH
Q 036686          286 FGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAV  365 (508)
Q Consensus       286 l~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~  365 (508)
                      ++..   .+.++++++.+++..+++||+|||+++++|++++|++||++|+++++|+++++++++.++++++++||||+||
T Consensus       232 l~~~---~~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~  308 (456)
T 3mdm_A          232 LKAE---EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQV  308 (456)
T ss_dssp             HHHT---SSCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHH
T ss_pred             HHhc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHH
Confidence            8754   2358899999999999999999999999999999999999999999999999998888999999999999999


Q ss_pred             HHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccc
Q 036686          366 VKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMV  445 (508)
Q Consensus       366 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~  445 (508)
                      |+|+|||+|+++. +.|.+++|++++||.|||||.|+++.+++||||++|+||++|+||||+++..       .....|+
T Consensus       309 i~E~lRl~p~~~~-~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~-------~~~~~~~  380 (456)
T 3mdm_A          309 LKESLRLYPPAWG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP-------KPRFTYF  380 (456)
T ss_dssp             HHHHHHHCCSSCC-EEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC-------CCSSSCC
T ss_pred             HHHHHHhCCCccc-cccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC-------CCCCccc
Confidence            9999999999986 5688999999999999999999999999999999999999999999997642       2356799


Q ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          446 PFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       446 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |||+|+|.|+|++||++|+++++++|+++|++++.++...  ......++.++++++|++++|
T Consensus       381 pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~r  441 (456)
T 3mdm_A          381 PFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRF--GLQEQATLKPLDPVLCTLRPR  441 (456)
T ss_dssp             TTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCCC--CEEESSSEEESSCCEEEEEEC
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcc--eeecceEEecCCCeEEEEEEc
Confidence            9999999999999999999999999999999999876543  334456788999999999987


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=8.1e-72  Score=543.15  Aligned_cols=441  Identities=19%  Similarity=0.270  Sum_probs=345.6

Q ss_pred             CCCCCCCC-CCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           29 GPKNLPPG-PRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        29 ~~~~~ppg-P~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      .+.+.||| |+++|++||++.+..   +.+..+.+++++||+||+++++|.+.++|++|+.+++++.++...+.......
T Consensus         8 ~~~~~PPg~P~~lP~iG~l~~~~~---~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~   84 (461)
T 3i3k_A            8 AGVKSPPYIFSPIPFLGHAIAFGK---SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS   84 (461)
T ss_dssp             --CCCCCBCCCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred             CCCCCCCCCCCCCCccccHHhhcc---CHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence            35567999 899999999988854   45677999999999999999999999999999999999977665554432111


Q ss_pred             Cc-eEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHH
Q 036686          108 PI-RLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTIC  186 (508)
Q Consensus       108 ~~-~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~  186 (508)
                      .. ...++  . ++....+|+.|+.+|+.+ .+.|+...++.+.+.+.+++..+++.+..     ...+|+...+..+++
T Consensus        85 ~~~~~~~g--~-g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~-----~~~~dl~~~~~~~~~  155 (461)
T 3i3k_A           85 RLTTPVFG--K-GVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE-----SGEKNVFEALSELII  155 (461)
T ss_dssp             HHHHHHHC--T-TSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS-----EEEEEHHHHHHHHHH
T ss_pred             HhhhhhcC--C-eeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcCHHHHHHHHHH
Confidence            11 11122  2 344444689999999855 67899999999999999999988888753     345899999999999


Q ss_pred             hhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCC
Q 036686          187 SILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQN  266 (508)
Q Consensus       187 ~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (508)
                      ++++.++||.++.......+.+.+..+..... .....+|.+.+  ....++..+..+.+.+++.+.++++++..     
T Consensus       156 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~l~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----  227 (461)
T 3i3k_A          156 LTASHCLHGKEIRSQLNEKVAQLYADLDGGFS-HAAWLLPGWLP--LPSFRRRDRAHREIKDIFYKAIQKRRQSQ-----  227 (461)
T ss_dssp             HHHHHHHTCHHHHHTCCHHHHHHHHHHHTTSS-HHHHHSCTTSC--CHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----
T ss_pred             HHHHHHHccHhhhhHHHHHHHHHHHHHHhccc-cchhhcccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence            99999999987643322333333333321111 11122332221  22344556667778888888887765421     


Q ss_pred             CCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhc
Q 036686          267 PNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG  346 (508)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~  346 (508)
                            ....   |+++.+++...+++..+++++++++++.+++||+|||+++++|++++|++||++|+++|+|++++++
T Consensus       228 ------~~~~---d~l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  298 (461)
T 3i3k_A          228 ------EKID---DILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCG  298 (461)
T ss_dssp             ------CCCC---SHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred             ------cccc---cHHHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc
Confidence                  1112   8999999876544446999999999999999999999999999999999999999999999999998


Q ss_pred             CCC-CCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCc
Q 036686          347 KDG-LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPER  425 (508)
Q Consensus       347 ~~~-~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  425 (508)
                      ++. .++++++.+||||+|||+|+|||+|+++. ++|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|+|
T Consensus       299 ~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  377 (461)
T 3i3k_A          299 ENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDR  377 (461)
T ss_dssp             TTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGG
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCC
Confidence            764 46889999999999999999999999976 6899999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEe
Q 036686          426 FLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVI  505 (508)
Q Consensus       426 ~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  505 (508)
                      |++++..     ..+...|+|||+|+|.|+|++||.+|++++++.|+++|++++.++..+.. .....+..|++++.++=
T Consensus       378 fl~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~  451 (461)
T 3i3k_A          378 YLQDNPA-----SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTV-NYTTMIHTPENPVIRYK  451 (461)
T ss_dssp             GGSCCHH-----HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCB-CCSSSSCCBSSCEEEEE
T ss_pred             CCCCCCC-----CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCc-ccceeecCCCCceEEee
Confidence            9986531     12356899999999999999999999999999999999999988754332 23455677778777653


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=9.6e-67  Score=512.07  Aligned_cols=446  Identities=18%  Similarity=0.261  Sum_probs=314.0

Q ss_pred             CCCCCCCCCCC-CccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           29 GPKNLPPGPRG-WPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        29 ~~~~~ppgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      .....||||++ +|++||++.+.   .+.+..+.+++++||+||++++|+.++++|+||+.+++++.+... +...+...
T Consensus        10 ~~~~~pPgp~~~~P~iG~~~~~~---~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~   85 (491)
T 3dax_A           10 RQTGEPPLENGLIPYLGCALQFG---ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHF   85 (491)
T ss_dssp             CCTTCCCEEEEEESCTTTTGGGT---CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHH
T ss_pred             cCCCCCCcCCCcccchhhHHHHh---hCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHH
Confidence            34467899988 89999998874   356778999999999999999999999999999999999965431 22211100


Q ss_pred             C-ceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhh--ccCCccchhhHHHHHH
Q 036686          108 P-IRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEA--FDNDLFVEVMSSCRLT  184 (508)
Q Consensus       108 ~-~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~--~~~~~~vdl~~~~~~~  184 (508)
                      . ....++  . +.....+|+.|+++|+.+ .+.|+...++.+.+.+.+.+...++......  ...+..+++...+..+
T Consensus        86 ~~~~~~~g--~-~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~  161 (491)
T 3dax_A           86 ATSAKAFG--H-RSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV  161 (491)
T ss_dssp             HHHHHHHT--C-CCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHH
T ss_pred             HHHHHHcC--C-CcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHH
Confidence            0 001112  1 222122588899888866 4588888888887777777766665543221  1124567899999999


Q ss_pred             HHhhhhhhhcccccchH--HHHHHHHHHHHHHHhcCCCcccccccchh-hhHhHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 036686          185 ICSILICLCFGAKISEE--RIKHIESILKDVMLITSPQLPDFLPILTP-LFRRQMREAKELRKRQMECLVPLIRNRKAFV  261 (508)
Q Consensus       185 ~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  261 (508)
                      ++++++..+||.+.+..  ....+......+..     +...+|++.. ++....+...+.++.+.+.+.   +++.+. 
T Consensus       162 i~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~-----~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~---~~~~~~-  232 (491)
T 3dax_A          162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQ-----FDKVFPALVAGLPIHMFRTAHNAREKLAESLR---HENLQK-  232 (491)
T ss_dssp             HHHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHH-----HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTS---HHHHTT-
T ss_pred             HHHHhHHHHcCcccccccchhhhhhHHHHHHHH-----HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHH---HHHhhc-
Confidence            99999999999887432  11112222221111     1122343221 111122233344444333321   111110 


Q ss_pred             hhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHH
Q 036686          262 EKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEI  341 (508)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei  341 (508)
                                .....   ++++.+++...+ .+.++++++.++++.+++||+|||+++++|++++|++||++|+++|+||
T Consensus       233 ----------~~~~~---d~l~~ll~~~~~-~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei  298 (491)
T 3dax_A          233 ----------RESIS---ELISLRMFLNDT-LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEV  298 (491)
T ss_dssp             ----------CBSCC---HHHHHHHHHHHH-HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             ----------ccchh---HHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence                      01112   788877654322 1257899999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC----------CCCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc----CCeeeCCCCEEEEcccc
Q 036686          342 VAAVGKDG----------LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL----GGYSIPAGVHVEFYTAW  407 (508)
Q Consensus       342 ~~~~~~~~----------~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~----~g~~ip~G~~v~~~~~~  407 (508)
                      +++++.++          .++++++++||||+|||+|||||+|+ +. ++|.+.+|+++    +||.|||||.|+++.++
T Consensus       299 ~~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~  376 (491)
T 3dax_A          299 KRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQL  376 (491)
T ss_dssp             HHHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHH
T ss_pred             HHHhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHh
Confidence            99997643          35889999999999999999999975 54 68999999998    68999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCcccCCCCCCc-cc---cCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCC
Q 036686          408 LTEDPDMWSDPGEFRPERFLEGDGVDV-DV---TGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGA  483 (508)
Q Consensus       408 ~~~d~~~~~~p~~F~p~R~l~~~~~~~-~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~  483 (508)
                      +|+||++|+||++|+||||+++++... +.   ....+..|+|||+|+|+|+|++||++|+++++++||++|++++.++.
T Consensus       377 ~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  456 (491)
T 3dax_A          377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ  456 (491)
T ss_dssp             HHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTT
T ss_pred             hcCCcccCCCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCC
Confidence            999999999999999999997643211 00   01235689999999999999999999999999999999999998754


Q ss_pred             C--CCCCc-ccce-eeeecCceeEEeec
Q 036686          484 P--PDPTE-TYAF-TVVMKNSLKAVILP  507 (508)
Q Consensus       484 ~--~~~~~-~~~~-~~~~~~~~~v~~~~  507 (508)
                      .  +.... ..+. +..++.+++|+++.
T Consensus       457 ~~~~~~~~~~~~~~~~~p~~~~~~~~r~  484 (491)
T 3dax_A          457 AKCPPLDQSRAGLGILPPLNDIEFKYKF  484 (491)
T ss_dssp             CCCCCBCGGGTBEEECCBSSCCEEEEEE
T ss_pred             CCCCCCCcccccccccCCCCCceEEEEe
Confidence            2  22221 1344 45667788888774


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=8.2e-67  Score=511.84  Aligned_cols=446  Identities=18%  Similarity=0.253  Sum_probs=331.5

Q ss_pred             CCCCCCCCCCC-CccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           29 GPKNLPPGPRG-WPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        29 ~~~~~ppgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      ...+.||||++ +|++||++.+.   .+.+..+.+++++||+||++++++.++++|++|+.+++++.+.. .+.......
T Consensus        10 ~~~~~PPgp~~~lPliG~~~~~~---~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~-~~~~~~~~~   85 (491)
T 3v8d_A           10 RQTGEPPLENGLIPYLGCALQFG---ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFHF   85 (491)
T ss_dssp             CCTTSCCEEEEEESSTTTTGGGT---CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCT-TEESSHHHH
T ss_pred             cCCCCCCCCCCCcceeccHHHHh---cCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCC-ccchHHHHH
Confidence            45578999998 69999999884   46777899999999999999999999999999999999995543 232211100


Q ss_pred             -CceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhc--cCCccchhhHHHHHH
Q 036686          108 -PIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAF--DNDLFVEVMSSCRLT  184 (508)
Q Consensus       108 -~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~~vdl~~~~~~~  184 (508)
                       .....++.+  .+.. .+|+.|+++|+. ..+.|++..++.+.+.+.+++..+++.+.....  ..+..+++..++..+
T Consensus        86 ~~~~~~~g~~--~~~~-~~g~~~~~~Rr~-~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~  161 (491)
T 3v8d_A           86 ALSAKAFGHR--SIDP-MDGNTTENINDT-FIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV  161 (491)
T ss_dssp             HHHHHHHTCC--CCCG-GGSSBCCCHHHH-HHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHH
T ss_pred             HHHHHhcCCc--cccc-ccchhHHHHHHH-HHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHH
Confidence             011112221  2222 368999999984 478999999999999999999988875532221  125678999999999


Q ss_pred             HHhhhhhhhcccccch--HHHHHHHHHHHHHHHhcCCCcccccccchh-hhHhHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 036686          185 ICSILICLCFGAKISE--ERIKHIESILKDVMLITSPQLPDFLPILTP-LFRRQMREAKELRKRQMECLVPLIRNRKAFV  261 (508)
Q Consensus       185 ~~~~~~~~~fg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  261 (508)
                      ++++++..+||.+...  .....+.+....+...     ...+|.+.. +.....+++.++++++.+++.+.++++++  
T Consensus       162 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~--  234 (491)
T 3v8d_A          162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQF-----DKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRE--  234 (491)
T ss_dssp             HHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHH-----HHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTCB--
T ss_pred             HHHHHHHHHcCccccccchhhhhhHHHHHHHHHH-----HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence            9999999999998642  2122222222222211     112222221 12233455666666776666555443321  


Q ss_pred             hhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHH
Q 036686          262 EKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEI  341 (508)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei  341 (508)
                              .    ..   ++++.++....+ .+.+++++++++++.+++||++||+++++|++++|++||++|+++|+||
T Consensus       235 --------~----~~---d~l~~l~~~~~~-~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei  298 (491)
T 3v8d_A          235 --------S----IS---ELISLRMFLNDT-LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEV  298 (491)
T ss_dssp             --------S----CC---HHHHHHHHHHHH-HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             --------c----cc---HHHHHHHHHhhc-cCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence                    0    11   788877754322 2368999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCC----------CCCCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc----CCeeeCCCCEEEEcccc
Q 036686          342 VAAVGKD----------GLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL----GGYSIPAGVHVEFYTAW  407 (508)
Q Consensus       342 ~~~~~~~----------~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~----~g~~ip~G~~v~~~~~~  407 (508)
                      +++++++          ..++.+++++||||+|||+|+|||+|+ +. +.|.+++|+++    +||.||||+.|+++.++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~  376 (491)
T 3v8d_A          299 KRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQL  376 (491)
T ss_dssp             HHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECTHH
T ss_pred             HHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecchh
Confidence            9998653          347888899999999999999999974 33 57999999999    99999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCcccCCCCCCccc----cCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCC
Q 036686          408 LTEDPDMWSDPGEFRPERFLEGDGVDVDV----TGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGA  483 (508)
Q Consensus       408 ~~~d~~~~~~p~~F~p~R~l~~~~~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~  483 (508)
                      +|+||++|+||++|||+||++.+......    ....+..|+|||+|+|.|+|++||.+|++++++.|+++|+++++++.
T Consensus       377 ~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~  456 (491)
T 3v8d_A          377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ  456 (491)
T ss_dssp             HHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---
T ss_pred             hcCCcccCCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCC
Confidence            99999999999999999999765421110    01235789999999999999999999999999999999999998763


Q ss_pred             C--CCCCc-ccce-eeeecCceeEEeec
Q 036686          484 P--PDPTE-TYAF-TVVMKNSLKAVILP  507 (508)
Q Consensus       484 ~--~~~~~-~~~~-~~~~~~~~~v~~~~  507 (508)
                      .  ++... ..+. +..|+.++.|+++-
T Consensus       457 ~~~~~~~~~~~~~~~~~p~~~i~v~~~~  484 (491)
T 3v8d_A          457 AKCPPLDQSRAGLGILPPLNDIEFKYKF  484 (491)
T ss_dssp             CCCCCBCGGGTBEEECCBSSCCEEEEEE
T ss_pred             CCCCCCCcccCcCcccCCCCCeEEEEEe
Confidence            2  22222 2333 46777789998873


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=3.4e-65  Score=501.56  Aligned_cols=447  Identities=16%  Similarity=0.180  Sum_probs=309.6

Q ss_pred             CCCCCCCCCCC-CccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           29 GPKNLPPGPRG-WPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        29 ~~~~~ppgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      .+.+.||||++ +|++||++.+..   +.+..+.+++++||+||++++|+.++++|+||+.+++++.++...+...+...
T Consensus        15 ~~~~~PPgp~~~~P~iG~~~~~~~---~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~   91 (498)
T 3b6h_A           15 RRPGEPPLDLGSIPWLGYALDFGK---DAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAI   91 (498)
T ss_dssp             CCTTCCCEECCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHH
T ss_pred             cCCCCCCCCCCCCcchhhHHHhcc---CHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHH
Confidence            34567999998 899999988754   46778999999999999999999999999999999999966543233222110


Q ss_pred             -CceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHH
Q 036686          108 -PIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTIC  186 (508)
Q Consensus       108 -~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~  186 (508)
                       .....++.   +... .+|+.|++.    ..+.|+...++.+...+.+.+...++.........+..+++...+..+++
T Consensus        92 ~~~~~~~g~---~~~~-~~~~~~rr~----~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~  163 (498)
T 3b6h_A           92 FLMERIFDV---QLPH-YSPSDEKAR----MKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLL  163 (498)
T ss_dssp             HHHHHTSCC---CCTT-CCHHHHHHH----HHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHH
T ss_pred             HHHHHHcCC---Cccc-cCHHHHHHH----HHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHH
Confidence             01111121   1222 356666433    34578888888887777666666666543322222456789999999999


Q ss_pred             hhhhhhhcccccchHHH---HHHHHHHHHHHHhcCCCcccccccchh-hh-HhHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 036686          187 SILICLCFGAKISEERI---KHIESILKDVMLITSPQLPDFLPILTP-LF-RRQMREAKELRKRQMECLVPLIRNRKAFV  261 (508)
Q Consensus       187 ~~~~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  261 (508)
                      ++++..+||.+++....   .........+..... .+...+|++.. +. ....+.+.++.+.+.+.+.   +++.+. 
T Consensus       164 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-  238 (498)
T 3b6h_A          164 RAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFR-QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLS---PARLAR-  238 (498)
T ss_dssp             HHHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTC---HHHHTT-
T ss_pred             HHHHHhhcCcccccccccchhhHHHhhHHHHHHHH-HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHHH---HHHHhc-
Confidence            99999999987632111   011111122221110 11223443321 11 1112233333333333221   111110 


Q ss_pred             hhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHH
Q 036686          262 EKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEI  341 (508)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei  341 (508)
                                .....   ++++.+++...+ .+.++++++. +++.+++||++||+++++|++++|++||++|+++|+|+
T Consensus       239 ----------~~~~~---d~l~~ll~~~~~-~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei  303 (498)
T 3b6h_A          239 ----------RAHRS---KWLESYLLHLEE-MGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGEL  303 (498)
T ss_dssp             ----------CBSCC---HHHHHHHHHHHH-TTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             ----------cccHH---HHHHHHHHHHHh-CCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence                      01112   788887754322 2246777777 88889999999999999999999999999999999999


Q ss_pred             HHHhcCCCC-------CCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc-----CCeeeCCCCEEEEcccc-c
Q 036686          342 VAAVGKDGL-------VKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL-----GGYSIPAGVHVEFYTAW-L  408 (508)
Q Consensus       342 ~~~~~~~~~-------~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-----~g~~ip~G~~v~~~~~~-~  408 (508)
                      ++++++++.       ++++++++||||+|||+|+||++|+ +. ++|.+.+|+++     +||.|||||.|+++.++ +
T Consensus       304 ~~v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~  381 (498)
T 3b6h_A          304 ESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP  381 (498)
T ss_dssp             HHHHHC----------CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCC
T ss_pred             HHHhcccCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhh
Confidence            999987542       5889999999999999999999985 54 68999999988     68999999999999999 9


Q ss_pred             ccCCCCCCCCCCCCCCcccCCCCCCc-cc---cCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCC
Q 036686          409 TEDPDMWSDPGEFRPERFLEGDGVDV-DV---TGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAP  484 (508)
Q Consensus       409 ~~d~~~~~~p~~F~p~R~l~~~~~~~-~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~  484 (508)
                      |+||++|+||++|+||||++++++.. +.   ....+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++..
T Consensus       382 ~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  461 (498)
T 3b6h_A          382 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV  461 (498)
T ss_dssp             CTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTC
T ss_pred             cCCccccCChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCC
Confidence            99999999999999999997643211 00   011356899999999999999999999999999999999999987542


Q ss_pred             --CCCCc-ccce-eeeecCceeEEeecC
Q 036686          485 --PDPTE-TYAF-TVVMKNSLKAVILPR  508 (508)
Q Consensus       485 --~~~~~-~~~~-~~~~~~~~~v~~~~r  508 (508)
                        +.... ..+. +..++.+++|++++|
T Consensus       462 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~  489 (498)
T 3b6h_A          462 EIPEFDLSRYGFGLMQPEHDVPVRYRIR  489 (498)
T ss_dssp             CCCCBCGGGTBSSBCCBSSCCEEEEEEC
T ss_pred             CCCCCCccccccccCCCCCCccEEEEec
Confidence              22111 1333 346667899998876


No 26 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=2.7e-63  Score=475.61  Aligned_cols=400  Identities=17%  Similarity=0.204  Sum_probs=312.6

Q ss_pred             ccccchhhhhhhcCchHHHHHHHHHHhC-CeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC--ceEEeecCc
Q 036686           41 PLVGNLVQVILQRRHFIFIVRDLRKKYG-PIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP--IRLVFSVGK  117 (508)
Q Consensus        41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~--~~~~~~~~~  117 (508)
                      |++||+..+..++   +.++.+++++|| ||+++.++|.+.++|++|+.++.++ + ...|........  ...+++  .
T Consensus         9 P~lG~~~~~~~~p---~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~g--~   81 (417)
T 1izo_A            9 KSLDNSLTLLKEG---YLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-D-TDRFQRQNALPKRVQKSLFG--V   81 (417)
T ss_dssp             CCTTHHHHHHHHG---GGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-C-TTTEECTTCSCHHHHTTTTC--T
T ss_pred             CccchHHHHhhCc---HHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-c-ccccccccccccchhhhhcc--c
Confidence            8999999987654   345899999998 8999999899999999999998654 3 235554322110  011122  1


Q ss_pred             cceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhcccc
Q 036686          118 CAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAK  197 (508)
Q Consensus       118 ~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~  197 (508)
                      .++. ..+|+.|+++|+. ..+.|++..++.+.+.+.+.++.+++.+..     ++.+|+..++..+++++++.+ ||.+
T Consensus        82 ~~l~-~~dg~~h~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~dl~~~~~~~~~~vi~~~-~G~~  153 (417)
T 1izo_A           82 NAIQ-GMDGSAHIHRKML-FLSLMTPPHQKRLAELMTEEWKAAVTRWEK-----ADEVVLFEEAKEILCRVACYW-AGVP  153 (417)
T ss_dssp             TCGG-GCCHHHHHHHHHH-HHHTSSHHHHHHHHHHHHHHHHHHHHHHTT-----SSEEEHHHHHHHHHHHHHHHH-HTCC
T ss_pred             ccee-ecCChHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeeHHHHHHHHHHHHHHHH-cCCC
Confidence            2333 3479999999985 478999999999999999999999998864     567999999999999999998 6998


Q ss_pred             cchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCcccccc
Q 036686          198 ISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPI  277 (508)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  277 (508)
                      +++.....+.+.+..+......    ..|        ...+..++.+.+.+++.+.++++++...         ..... 
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~----~~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~~~---------~~~~~-  211 (417)
T 1izo_A          154 LKETEVKERADDFIDMVDAFGA----VGP--------RHWKGRRARPRAEEWIEVMIEDARAGLL---------KTTSG-  211 (417)
T ss_dssp             CCTTTHHHHHHHHHHHHHHTTC----CSH--------HHHHHHHHHHHHHHHHHHHHHHHHTTSS---------CCCTT-
T ss_pred             CCchHHHHHHHHHHHHHhhccc----CCc--------cchhHHHHHHHHHHHHHHHHHHHHhhcc---------CCCcC-
Confidence            8654434444433333332211    111        1233456677788888888888775321         00112 


Q ss_pred             chhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCccccc
Q 036686          278 GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVE  357 (508)
Q Consensus       278 ~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~  357 (508)
                        |+++.+++....++..++++++..++..+ +||++||+++++|++++|++||++|+++++|                 
T Consensus       212 --d~l~~ll~~~~~~g~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------  271 (417)
T 1izo_A          212 --TALHEMAFHTQEDGSQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------  271 (417)
T ss_dssp             --SHHHHHHHCBCTTSCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------
T ss_pred             --CHHHHHHHhccccCCCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------
Confidence              78998887644333368888887777665 4999999999999999999999999999987                 


Q ss_pred             CCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCcccc
Q 036686          358 KMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVT  437 (508)
Q Consensus       358 ~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~  437 (508)
                      ++||++|||+|+||++|+++. +.|.+.+|++++|+.||||+.|+++.+++||||++|+||++|||+||++.+.      
T Consensus       272 ~~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~------  344 (417)
T 1izo_A          272 NSREREMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREE------  344 (417)
T ss_dssp             CHHHHHHHHHHHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCC------
T ss_pred             CCHHHHHHHHHHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCCC------
Confidence            479999999999999999997 6899999999999999999999999999999999999999999999997542      


Q ss_pred             CCCCCccccCCCC----CCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          438 GTRGVKMVPFGAG----RRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       438 ~~~~~~~~~Fg~G----~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                        .+..|+|||+|    +|.|+|++||++|+++++++|+++|++++.++. .... ...++..|+++++|++++|
T Consensus       345 --~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~-~~~~-~~~~~~~p~~~~~~~~~~r  415 (417)
T 1izo_A          345 --NLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS-LHYS-LARMPSLPESGFVMSGIRR  415 (417)
T ss_dssp             --CSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCC-CCCC-SSSSSCCCTTCCEEEEEEE
T ss_pred             --CCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC-cCcc-cccCCCCCCCCceEeeeeC
Confidence              35689999999    599999999999999999999999999987642 2222 2346778889999999987


No 27 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=1.7e-63  Score=477.73  Aligned_cols=398  Identities=16%  Similarity=0.138  Sum_probs=301.8

Q ss_pred             CCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc
Q 036686           31 KNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI  109 (508)
Q Consensus        31 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~  109 (508)
                      ++.||||+++|++|++...+.  .+.+..+.++ ++||||+++++ ++.+.++|+||+.+++++.++  .|.+++... +
T Consensus        25 ~~~~PGP~~~p~lG~~~~~~~--~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~-~   98 (436)
T 2cd8_A           25 QQGTTASPPVLDLGALGQDFA--ADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNS-T   98 (436)
T ss_dssp             ---------CCBHHHHHHHHH--HCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGC-S
T ss_pred             ccCCCCCCccccCCCCCcccc--cChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccc-c
Confidence            356899999999999763221  2456678888 89999999998 788999999999999999765  566654211 1


Q ss_pred             eEEe---ecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHH
Q 036686          110 RLVF---SVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTI  185 (508)
Q Consensus       110 ~~~~---~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~  185 (508)
                      ....   .....++.. .+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+...  . ++.+|+..++ ..++
T Consensus        99 ~~~~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~-~~~vd~~~~~~~~~~  173 (436)
T 2cd8_A           99 TPLTEAEAALNHNMLE-SDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAA--P-DGRADLMESLAWPLP  173 (436)
T ss_dssp             SCCCTTGGGTCCSGGG-CCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTC--T-TSCEEHHHHTTTHHH
T ss_pred             cccccccccccccccc-cCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--c-CCCcchHHHHHHHHH
Confidence            1100   111223433 4799999999965 789999999999999999999999999742  1 5579999876 5799


Q ss_pred             HhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCC
Q 036686          186 CSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQ  265 (508)
Q Consensus       186 ~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  265 (508)
                      +++++. +||.+.++  .+.+.+....+..   ..    .|          ++..++.+.+.+++.+.++++++..    
T Consensus       174 ~~vi~~-~~G~~~~~--~~~~~~~~~~~~~---~~----~~----------~~~~~~~~~~~~~~~~~i~~r~~~~----  229 (436)
T 2cd8_A          174 ITVISE-LLGVPEPD--RAAFRVWTDAFVF---PD----DP----------AQAQTAMAEMSGYLSRLIDSKRGQD----  229 (436)
T ss_dssp             HHHHHH-HHTCCGGG--HHHHHHHHHHHHS---CS----ST----------THHHHHHHHHHHHHHHHHHHHTTSC----
T ss_pred             HHHHHH-HhCCCHHH--HHHHHHHHHHHhc---cC----CH----------HHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence            999997 69988643  2344444443321   00    01          2345566777788888887765411    


Q ss_pred             CCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 036686          266 NPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAV  345 (508)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~  345 (508)
                               ..   |+++.+++...+++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+    
T Consensus       230 ---------~~---d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~----  293 (436)
T 2cd8_A          230 ---------GE---DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM----  293 (436)
T ss_dssp             ---------CC---SHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG----
T ss_pred             ---------CC---CHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh----
Confidence                     11   78888886543223369999999999999999999999999999999999999999999984    


Q ss_pred             cCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCc
Q 036686          346 GKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPER  425 (508)
Q Consensus       346 ~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  425 (508)
                                    .||+|||+|+||++|+++..++|.+++|++++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       294 --------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR  359 (436)
T 2cd8_A          294 --------------TLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR  359 (436)
T ss_dssp             --------------GGHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTS
T ss_pred             --------------hhHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCC
Confidence                          379999999999999999668899999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEE
Q 036686          426 FLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAV  504 (508)
Q Consensus       426 ~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  504 (508)
                      |              ...|+|||+|+|.|+|++||++|++++++.|+++| +++++.+.. +.......++.++.+++|+
T Consensus       360 ~--------------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~l~v~  424 (436)
T 2cd8_A          360 D--------------TAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPG-ELVWYPNPMIRGLKALPIR  424 (436)
T ss_dssp             C--------------CTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGG-GCCBCCCTTBCCBSCCEEC
T ss_pred             C--------------CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCc-cceeccCcccCCcceeEEE
Confidence            5              13589999999999999999999999999999999 698864211 1222334456778899999


Q ss_pred             eecC
Q 036686          505 ILPR  508 (508)
Q Consensus       505 ~~~r  508 (508)
                      ++||
T Consensus       425 ~~~r  428 (436)
T 2cd8_A          425 WRRG  428 (436)
T ss_dssp             ----
T ss_pred             EecC
Confidence            9987


No 28 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=3.1e-64  Score=492.10  Aligned_cols=437  Identities=16%  Similarity=0.215  Sum_probs=299.3

Q ss_pred             CCCCCCCCCCC-CccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCC-
Q 036686           29 GPKNLPPGPRG-WPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPD-  106 (508)
Q Consensus        29 ~~~~~ppgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~-  106 (508)
                      .+.+.||||++ +|++||++.+..   +.+..+.+++++||+||++++|+.++++|+||+.+++++.++. .++..+.. 
T Consensus        15 ~~~~~pPgp~~~~P~iG~~~~~~~---~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~-~~~~~~~~~   90 (475)
T 3b98_A           15 RRRNEPPLDKGMIPWLGHALEFGK---DAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVA-SLDQTSYAQ   90 (475)
T ss_dssp             CCTTCCCEECCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTT-TEESHHHHH
T ss_pred             cCCCCCCCCCCCcchHHhHHHHhh---CHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcc-cCCchHHHH
Confidence            34567999998 899999988753   4677899999999999999999999999999999999996543 23322110 


Q ss_pred             CCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhh-ccCCccchhhHHHHHHH
Q 036686          107 SPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEA-FDNDLFVEVMSSCRLTI  185 (508)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vdl~~~~~~~~  185 (508)
                      ......++  . ++.. .+++.|+   + +..+.|++..++.+.+.+.+++..+++.+.... ......+++...+..++
T Consensus        91 ~~~~~~~g--~-~~~~-~~~~~~R---~-~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  162 (475)
T 3b98_A           91 VLMKRIFN--M-ILPS-HNPESEK---K-RAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLL  162 (475)
T ss_dssp             HHHHHTTC--C-CCTT-CCHHHHH---H-HHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHH
T ss_pred             HHHHHHhC--C-CCCC-CChHHHH---H-HHHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHH
Confidence            00111112  1 2222 2566553   4 345689999999998888888888877654322 11234578888888888


Q ss_pred             HhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchh-hh-HhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          186 CSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTP-LF-RRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       186 ~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      +++++...||.+...  .+.+......+...     ...+|++.. +. ....+.+.+..+.+.+    .+.+...    
T Consensus       163 ~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~-----~~~~p~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----  227 (475)
T 3b98_A          163 FKTGYLTVFGAENNN--SAALTQIYEEFRRF-----DKLLPKLARTTVNKEEKQIASAAREKLWK----WLTPSGL----  227 (475)
T ss_dssp             HHHHHHHHHCCTTSC--HHHHHHHHHHHHHH-----HHHHHHHHTTCCCHHHHHHHHHHHHHHHH----HHSCTTS----
T ss_pred             HHHhhhheeCCcccc--chhcHHHHHHHHHH-----HhhhHHHHHHhcChhhhHHHHHHHHHHHH----HHHHHHh----
Confidence            888888888865321  12222222222111     112332211 00 1112222233222222    1111110    


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVA  343 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~  343 (508)
                            .......   ++++.+++...+ .+.++++++. +++.+++||+|||+++++|++++|++||++|+++|+|++ 
T Consensus       228 ------~~~~~~~---d~l~~ll~~~~~-~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~-  295 (475)
T 3b98_A          228 ------DRKPREQ---SWLGSYVKQLQD-EGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ-  295 (475)
T ss_dssp             ------CCCCCTT---SHHHHHHHHHHH-TTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-
T ss_pred             ------hcccccc---HHHHHHHHHHHH-cCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh-
Confidence                  0011112   788888764322 2257788888 999999999999999999999999999999999999999 


Q ss_pred             HhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc-----CCeeeCCCCEEEEcccc-cccCCCCCCC
Q 036686          344 AVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL-----GGYSIPAGVHVEFYTAW-LTEDPDMWSD  417 (508)
Q Consensus       344 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~  417 (508)
                       .+ ++.++++++++||||+|||+|+|||+|+ +. ++|.+.+|+++     +||.||||+.|+++.++ +||||++|+|
T Consensus       296 -~~-~~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~d  371 (475)
T 3b98_A          296 -GG-KHLRLEERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQ  371 (475)
T ss_dssp             --------------CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSS
T ss_pred             -cC-CCCCCHHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCC
Confidence             23 2346889999999999999999999986 54 68999999998     88999999999999999 9999999999


Q ss_pred             CCCCCCCcccCCCCCCc-cc---cCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCC--CCCCc-c
Q 036686          418 PGEFRPERFLEGDGVDV-DV---TGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAP--PDPTE-T  490 (508)
Q Consensus       418 p~~F~p~R~l~~~~~~~-~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~--~~~~~-~  490 (508)
                      |++|||+||++.++... +.   ....+..|+|||+|+|.|+|++||++|+++++++|+++|+++++++..  +.... .
T Consensus       372 P~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  451 (475)
T 3b98_A          372 PEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSR  451 (475)
T ss_dssp             TTSCCTTTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGG
T ss_pred             cccCCcchhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCccc
Confidence            99999999997643211 00   012356899999999999999999999999999999999999987542  12111 2


Q ss_pred             cce-eeeecCceeEEeecC
Q 036686          491 YAF-TVVMKNSLKAVILPR  508 (508)
Q Consensus       491 ~~~-~~~~~~~~~v~~~~r  508 (508)
                      .++ +..++.+++|++++|
T Consensus       452 ~~~~~~~p~~~~~~~~~~R  470 (475)
T 3b98_A          452 YGFGILQPAGDLEIRYRIR  470 (475)
T ss_dssp             TBEEECCBSSCCEEEEEEC
T ss_pred             ccccccCCCCCceEEEEec
Confidence            333 456677999999987


No 29 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=7.3e-64  Score=474.41  Aligned_cols=383  Identities=17%  Similarity=0.214  Sum_probs=297.1

Q ss_pred             CCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCC-CCCCceEEee
Q 036686           36 GPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRP-PDSPIRLVFS  114 (508)
Q Consensus        36 gP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~-~~~~~~~~~~  114 (508)
                      ++..+|++||++.+..   +.+..+.+++++||||++ ++++.+.++|+||+.+++++.++  .|.+++ ......... 
T Consensus         3 ~~~~~p~iGnl~~~~~---~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~-   75 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQ---DPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT-   75 (389)
T ss_dssp             ECCHHHHHHHHHHHHH---CHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH-
T ss_pred             ccccccccccHHHHhh---ChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh-
Confidence            4556899999988753   456779999999999999 88999999999999999999765  676654 111111111 


Q ss_pred             cCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhc
Q 036686          115 VGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCF  194 (508)
Q Consensus       115 ~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  194 (508)
                       + .++.. .+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+.      ++.+|+..++..+++++++.++|
T Consensus        76 -g-~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~------~~~~dl~~~~~~~~~~vi~~~~f  145 (389)
T 1n97_A           76 -G-RGLLT-DWGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWR------GEERDLDHEMLALSLRLLGRALF  145 (389)
T ss_dssp             -C-SSTTT-CCHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCC------SCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             -C-Ccccc-CCcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHcc------CCcCcHHHHHHHHHHHHHHHHHc
Confidence             2 23333 3799999999955 7899999999999999999999998875      35799999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccc
Q 036686          195 GAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMV  274 (508)
Q Consensus       195 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  274 (508)
                      |.++++    .+.+....+..........++.++   +....++..++.+.+.+++.+.+++                  
T Consensus       146 G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~i~~------------------  200 (389)
T 1n97_A          146 GKPLSP----SLAEHALKALDRIMAQTRSPLALL---DLAAEARFRKDRGALYREAEALIVH------------------  200 (389)
T ss_dssp             SSCCCH----HHHHHHHHHHHHHHHHHHCGGGGG---CHHHHHHHHHHHHHHHHHHGGGTTS------------------
T ss_pred             CCcchH----HHHHHHHHHHHHHHHHHhhHHHhc---CCchhHHHHHHHHHHHHHHHHHHHH------------------
Confidence            999873    333333333322110000111111   1111222333333333222211110                  


Q ss_pred             cccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcc
Q 036686          275 SPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEE  354 (508)
Q Consensus       275 ~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~  354 (508)
                           .    ++       ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.         
T Consensus       201 -----r----ll-------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~---------  255 (389)
T 1n97_A          201 -----P----PL-------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------  255 (389)
T ss_dssp             -----T----TG-------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH---------
T ss_pred             -----H----hc-------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---------
Confidence                 1    22       1478999999999999999999999999999999999999999999999874         


Q ss_pred             cccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCc
Q 036686          355 DVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDV  434 (508)
Q Consensus       355 ~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~  434 (508)
                               |||+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++|||  +|+||++||||||+++..   
T Consensus       256 ---------a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~~---  320 (389)
T 1n97_A          256 ---------AAFQEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEERG---  320 (389)
T ss_dssp             ---------HHHHHHHHHSCSSCC-EEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSCC---
T ss_pred             ---------HHHHHHHhcCCCccc-cceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCCC---
Confidence                     999999999999998 48999999999999999999999999999999  999999999999997521   


Q ss_pred             cccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          435 DVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       435 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                          .++..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..+    ..+.++.++.+++|+++||
T Consensus       321 ----~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~----~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          321 ----TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV----LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             ----CCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE----EESSSEEETTCCEECCBC-
T ss_pred             ----CCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc----cceEEeeeCCCceEEEeec
Confidence                23568999999999999999999999999999999999988765432    4466788888999999986


No 30 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=4.4e-62  Score=465.24  Aligned_cols=375  Identities=14%  Similarity=0.152  Sum_probs=290.7

Q ss_pred             CCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcC-CeeEEEeCCHHHHHHHHHhcC-CCcCCCCCCCCce
Q 036686           33 LPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMG-QRTVVIVTSSQLIHEALVQRG-PEFASRPPDSPIR  110 (508)
Q Consensus        33 ~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~vvv~~p~~~~~il~~~~-~~~~~~~~~~~~~  110 (508)
                      .||||+++|++|+...   +   .+..+.+++ +||||+++.++ |.+.++|++++.+++++.++. ..+..++......
T Consensus         2 ~pPGp~~~P~~g~~~~---~---p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~   74 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP---E---PPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS   74 (404)
T ss_dssp             ----CCBSSCCCSSTT---S---CCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred             CCCCCCCCCCCCCcCC---C---ccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence            4899999999998765   3   334467775 69999999874 677788999999999997652 1222222211111


Q ss_pred             EE---eecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHh
Q 036686          111 LV---FSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICS  187 (508)
Q Consensus       111 ~~---~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~  187 (508)
                      ..   ...+..++.. .+|+.|+++||.+ .+.|++..++.+.+.+.++++.+++.+...... ++++|+...+...+.+
T Consensus        75 ~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~-~~~~d~~~~~~~~~~~  151 (404)
T 1jfb_A           75 ASGKQAAKAKPTFVD-MDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCA-NGPVDLVKEFALPVPS  151 (404)
T ss_dssp             HHHHHHTTSCCCGGG-CCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCST-TSCEEHHHHTTTHHHH
T ss_pred             ccccchhcccCcccc-cCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCccHHHHHHHHHHH
Confidence            00   0112223433 4799999999854 789999999999999999999999999765332 4679999999999999


Q ss_pred             hhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCC
Q 036686          188 ILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNP  267 (508)
Q Consensus       188 ~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (508)
                      +++..+||.+.++..  .+.... ....  .     ..+        ..+...++.+.+.+++.+.++++++..      
T Consensus       152 ~i~~~~~G~~~~~~~--~~~~~~-~~~~--~-----~~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~~------  207 (404)
T 1jfb_A          152 YIIYTLLGVPFNDLE--YLTQQN-AIRT--N-----GSS--------TAREASAANQELLDYLAILVEQRLVEP------  207 (404)
T ss_dssp             HHHHHHHTCCGGGHH--HHHHHH-HHHH--C-----TTS--------CHHHHHHHHHHHHHHHHHHHHHHHHSC------
T ss_pred             HHHHHHcCCCHHHHH--HHHHHH-HHHh--c-----cCc--------chHHHHHHHHHHHHHHHHHHHHHHhCC------
Confidence            999999999875421  111111 1111  0     011        123445566778888888888776521      


Q ss_pred             CCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC
Q 036686          268 NSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGK  347 (508)
Q Consensus       268 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~  347 (508)
                             ..   |+++.+++...+ ++.++++++.+++..+++||+|||+++++|++++|++||++|+++++|       
T Consensus       208 -------~~---d~l~~ll~~~~~-~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~-------  269 (404)
T 1jfb_A          208 -------KD---DIISKLCTEQVK-PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN-------  269 (404)
T ss_dssp             -------CS---SHHHHHHHHTTT-TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-------
T ss_pred             -------CC---cHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-------
Confidence                   11   789988864422 236999999999999999999999999999999999999999999982       


Q ss_pred             CCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCccc
Q 036686          348 DGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFL  427 (508)
Q Consensus       348 ~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l  427 (508)
                                 .+|++|||+|+||++|+++..++|.+++|++++||.|||||.|+++.+++||||++|+||++|+||||+
T Consensus       270 -----------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~  338 (404)
T 1jfb_A          270 -----------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKW  338 (404)
T ss_dssp             -----------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC
T ss_pred             -----------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCC
Confidence                       379999999999999999966789999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCC
Q 036686          428 EGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPG  482 (508)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~  482 (508)
                      +.            ..|+|||+|+|.|+|++||++|++++++.|+++| +++++++
T Consensus       339 ~~------------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          339 PP------------QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             CS------------SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             CC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence            53            2499999999999999999999999999999999 7988753


No 31 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=8.3e-62  Score=465.06  Aligned_cols=403  Identities=15%  Similarity=0.157  Sum_probs=311.6

Q ss_pred             CCCCCCCccccchhhhhhhcCchHHHHHHHHHHh-CCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC-c-e
Q 036686           34 PPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKY-GPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP-I-R  110 (508)
Q Consensus        34 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~-~-~  110 (508)
                      ||||   |++||++.+..++.   .++.+++++| |||+++.+++.+.++|++|+.++ ++.+. ..|++.+.... . .
T Consensus         4 pPg~---P~iG~~~~~~~~p~---~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~   75 (415)
T 3awm_A            4 TPHT---KGPDETLSLLADPY---RFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQK   75 (415)
T ss_dssp             --------CCCCHHHHHHSTT---THHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHT
T ss_pred             CCCC---CccchHHHHHhChH---HHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhh
Confidence            6776   89999998876544   4589999999 79999998888999999999986 66443 45655432110 0 0


Q ss_pred             EEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhh
Q 036686          111 LVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILI  190 (508)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~  190 (508)
                      ..+  +..++. ..+|+.|+++|+. +.+.|++..++.+.+.+.+.++.+++.+..     ++.+|+..++..+++++++
T Consensus        76 ~~~--g~~~l~-~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~-----~~~vdl~~~~~~~~~~vi~  146 (415)
T 3awm_A           76 TLL--GQGGVQ-GLDGETHRHRKQM-FMGLMTPERVRALAQLFEAEWRRAVPGWTR-----KGEIVFYDELHEPLTRAVC  146 (415)
T ss_dssp             TTS--CSSSGG-GCCHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHHHHHHHH-----HSEEEHHHHHHHHHHHHHH
T ss_pred             hcc--CCccee-ecCcHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHhhcc-----CCcEeHHHHHHHHHHHHHH
Confidence            111  212333 3479999999985 478999999999999999999999999965     4579999999999999999


Q ss_pred             hhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCC
Q 036686          191 CLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSE  270 (508)
Q Consensus       191 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  270 (508)
                      .+ ||.+.++.....+.+.+..+.....        .+.+    ...+..++.+.+.+++.+.++++++...        
T Consensus       147 ~~-~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~~~~~~~~~~~i~~r~~~~~--------  205 (415)
T 3awm_A          147 AW-AGVPLPDDEAGNRAGELRALFDAAG--------SASP----RHLWSRLARRRVDAWAKRIIEGIRAGSI--------  205 (415)
T ss_dssp             HH-HTCCCCGGGHHHHHHHHHHHHHSTT--------CSSH----HHHHHHHHHHHHHHHHHHHHHHHHHTSS--------
T ss_pred             HH-cCCCCCcchHHHHHHHHHHHHHHhc--------ccCc----hHHHHHHHHHHHHHHHHHHHHHHHHhhh--------
Confidence            98 8998865443333333333332211        1111    1234556677888889999888776321        


Q ss_pred             CccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCC
Q 036686          271 SEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGL  350 (508)
Q Consensus       271 ~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~  350 (508)
                       .....   |+++.+++....++..++++++.+++..++ ||++||+++++|++++|++||++|+++++|          
T Consensus       206 -~~~~~---d~l~~ll~~~~~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e----------  270 (415)
T 3awm_A          206 -GSGSG---TAAYAIAWHRDRHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ----------  270 (415)
T ss_dssp             -CCCTT---SHHHHHHHCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC----------
T ss_pred             -cCCCC---CHHHHHHhhhhccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH----------
Confidence             00112   789998876443333688888887777654 999999999999999999999999999986          


Q ss_pred             CCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCC
Q 036686          351 VKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGD  430 (508)
Q Consensus       351 ~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~  430 (508)
                              +||++|||+|+||++|+++. ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||++.+
T Consensus       271 --------~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~  341 (415)
T 3awm_A          271 --------PDYAELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD  341 (415)
T ss_dssp             --------TTHHHHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC
T ss_pred             --------HHHHHHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC
Confidence                    58999999999999999997 689999999999999999999999999999999999999999999999754


Q ss_pred             CCCccccCCCCCccccCCCC----CCCCCChhHHHHHHHHHHHHHHHhceeecCCCCCCCCCcccceeeeecCceeEEee
Q 036686          431 GVDVDVTGTRGVKMVPFGAG----RRICPAWSLGILHINLLIARMVHAYKWLPVPGAPPDPTETYAFTVVMKNSLKAVIL  506 (508)
Q Consensus       431 ~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  506 (508)
                      .        ....|+|||+|    +|.|+|++||++|++++++.|+++|++++.++.. .. ....+++.|+++++|+++
T Consensus       342 ~--------~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~-~~~~~~~~p~~~~~~~~~  411 (415)
T 3awm_A          342 E--------DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDL-SI-DFARLPALPKSGFVMRNV  411 (415)
T ss_dssp             C--------CSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCC-CB-CTTSSSCCBTTCCEEEEE
T ss_pred             C--------CCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCC-Cc-CcCCCccccCCCceEEEE
Confidence            2        35689999999    5999999999999999999999999999876432 22 234567788899999998


Q ss_pred             cC
Q 036686          507 PR  508 (508)
Q Consensus       507 ~r  508 (508)
                      +.
T Consensus       412 ~~  413 (415)
T 3awm_A          412 HI  413 (415)
T ss_dssp             ES
T ss_pred             eC
Confidence            63


No 32 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=1.1e-61  Score=461.46  Aligned_cols=386  Identities=17%  Similarity=0.136  Sum_probs=301.8

Q ss_pred             CCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEE----c-CC-eeEEEeCCHHHHHHHH-HhcCCCcCC
Q 036686           30 PKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQ----M-GQ-RTVVIVTSSQLIHEAL-VQRGPEFAS  102 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~----~-~~-~~~vvv~~p~~~~~il-~~~~~~~~~  102 (508)
                      ..+.||||+++|+.     +.   .+.+..+.++ ++||+|++++    + ++ .+.++|+||+.+++++ .+.  .|.+
T Consensus         8 ~~~lppgp~~~p~~-----~~---~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~   76 (406)
T 1ued_A            8 VAPLLREPANFQLR-----TN---CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTT   76 (406)
T ss_dssp             CCCEEECCTTTTCE-----ET---TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEEC
T ss_pred             CCCCcccCcccCCC-----CC---CCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccc
Confidence            34578999999986     22   2445568889 9999999999    7 78 8999999999999999 443  3544


Q ss_pred             CCCCCCce--EEe-ec-CccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhh
Q 036686          103 RPPDSPIR--LVF-SV-GKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVM  178 (508)
Q Consensus       103 ~~~~~~~~--~~~-~~-~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~  178 (508)
                      ++.. .+.  ... .. ...++.. .+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+...    ++.+|+.
T Consensus        77 ~~~~-~~~~~~~~~~~~~~~~l~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~d~~  149 (406)
T 1ued_A           77 RPQF-TQSKSGAHVEAQFVGQIST-YDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEAE----GPSADLQ  149 (406)
T ss_dssp             CCCC----------CGGGTTCGGG-CCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHH----CTTEEHH
T ss_pred             cccc-ccccccccccccccccccc-CCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeHH
Confidence            4321 111  111 00 1123434 4799999999955 789999999999999999999999999742    5679999


Q ss_pred             HHHHH-HHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHH
Q 036686          179 SSCRL-TICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNR  257 (508)
Q Consensus       179 ~~~~~-~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  257 (508)
                      .++.. +++++++ .+||.+.++  .+.+.+....+..     .  ..+         .++..++.+.+.+++.+.++++
T Consensus       150 ~~~~~~~~~~vi~-~~~G~~~~~--~~~~~~~~~~~~~-----~--~~~---------~~~~~~~~~~~~~~~~~~i~~r  210 (406)
T 1ued_A          150 GLFADPVGAHALC-ELLGIPRDD--QREFVRRIRRNAD-----L--SRG---------LKARAADSAAFNRYLDNLLARQ  210 (406)
T ss_dssp             HHTHHHHHHHHHH-HHHTCCHHH--HHHHHHHHHHCC----------CC---------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhHHHHHH-HHcCCCHHH--HHHHHHHHHHHHh-----c--cCC---------HHHHHHHHHHHHHHHHHHHHHH
Confidence            88765 9999998 479987532  2233333322211     0  001         2345566777888888888877


Q ss_pred             HHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHH
Q 036686          258 KAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKL  337 (508)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~l  337 (508)
                      ++..             ..   |+++.+++..   ++.++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus       211 ~~~~-------------~~---d~l~~ll~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l  271 (406)
T 1ued_A          211 RADP-------------DD---GLLGMIVRDH---GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELL  271 (406)
T ss_dssp             HHSC-------------CS---SHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHH
T ss_pred             HhCC-------------CC---CHHHHHHHhc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHH
Confidence            6521             11   7888888753   236899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCC
Q 036686          338 YKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSD  417 (508)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  417 (508)
                      ++|++                  +++|||+|+||++|+++..++|.+++|++++||.|||||.|+++.+++||||++|+|
T Consensus       272 ~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~d  333 (406)
T 1ued_A          272 FESPE------------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPD  333 (406)
T ss_dssp             HHCHH------------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSS
T ss_pred             HhCHH------------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCC
Confidence            99864                  589999999999999997678999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeee
Q 036686          418 PGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVV  496 (508)
Q Consensus       418 p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~  496 (508)
                      |++|+||||              ...|+|||+|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++
T Consensus       334 p~~F~PeR~--------------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~  398 (406)
T 1ued_A          334 PDVLDANRA--------------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIE-EVKYRSAFVDC  398 (406)
T ss_dssp             TTSCCTTSC--------------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCCSSSCC
T ss_pred             hhhcCCCCC--------------CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcc-ccccccccccc
Confidence            999999997              13589999999999999999999999999999999 799875321 22334456677


Q ss_pred             ecCceeEEe
Q 036686          497 MKNSLKAVI  505 (508)
Q Consensus       497 ~~~~~~v~~  505 (508)
                      + .+++|++
T Consensus       399 ~-~~lpv~~  406 (406)
T 1ued_A          399 P-DQVPVTW  406 (406)
T ss_dssp             B-SCCEEEC
T ss_pred             C-CeeeeeC
Confidence            7 8888874


No 33 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=3e-61  Score=462.12  Aligned_cols=408  Identities=15%  Similarity=0.149  Sum_probs=305.7

Q ss_pred             CCCCCCCCCCCccccchhhhh-hhc-CchHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCCC
Q 036686           30 PKNLPPGPRGWPLVGNLVQVI-LQR-RHFIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPPD  106 (508)
Q Consensus        30 ~~~~ppgP~~~p~~G~~~~~~-~~~-~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~  106 (508)
                      .++.|||     ++|++...- ... .+.+..+.++++ ||||+++++ |+.+.++|++++.+++++.+. ..|+.++..
T Consensus         4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~   76 (428)
T 1cpt_A            4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS   76 (428)
T ss_dssp             TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred             ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence            3456777     888754431 111 346777888876 799999998 678999999999999999654 467776541


Q ss_pred             CCce-----E-E---eec---CccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCcc
Q 036686          107 SPIR-----L-V---FSV---GKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLF  174 (508)
Q Consensus       107 ~~~~-----~-~---~~~---~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~  174 (508)
                      ....     . +   .+.   ...++.. .+|+.|+++||.+ .+.|++..++.+.+.+.++++.+++.+...    ++.
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~-~~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~  150 (428)
T 1cpt_A           77 EILYDQNNEAFMRSISGGCPHVIDSLTS-MDPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDF----DGE  150 (428)
T ss_dssp             SSCCCHHHHHHHHHHTTTSSCSSCCGGG-CCTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTS----SSE
T ss_pred             ccCCcccccchhcccccccccccccccc-CChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHh----CCC
Confidence            1111     0 1   110   0123444 4799999999965 789999999999999999999999999752    357


Q ss_pred             chhhHH-HHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHH
Q 036686          175 VEVMSS-CRLTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPL  253 (508)
Q Consensus       175 vdl~~~-~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~  253 (508)
                      +|+... ...+++++++.+ ||.+.++.  +.+.+....+..... .....+|++........++..++.+.+.+++.+.
T Consensus       151 ~d~~~~~~~~~~~~vi~~~-fG~~~~~~--~~~~~~~~~~~~~~~-~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~  226 (428)
T 1cpt_A          151 CDFMTDCALYYPLHVVMTA-LGVPEDDE--PLMLKLTQDFFGVHE-PDEQAVAAPRQSADEAARRFHETIATFYDYFNGF  226 (428)
T ss_dssp             EEHHHHTTTTHHHHHHHHH-HTCCGGGH--HHHHHHHHTTTCC-----------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             eehHHHHHhhhHHHHHHHH-cCCCHhHH--HHHHHHHHHHHhccc-ccccccccccccchhhHHHHHHHHHHHHHHHHHH
Confidence            899754 567999999999 99987542  233333322211100 1112234332211122345566677788888888


Q ss_pred             HHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHH
Q 036686          254 IRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEI  333 (508)
Q Consensus       254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~  333 (508)
                      ++++++..             ..   |+++.+++... ++..++++++.+++..+++||+|||+++++|++++|++||++
T Consensus       227 i~~r~~~~-------------~~---dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~  289 (428)
T 1cpt_A          227 TVDRRSCP-------------KD---DVMSLLANSKL-DGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQ  289 (428)
T ss_dssp             HHHHTTSC-------------CS---SHHHHHHHCBS-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHcCC-------------CC---cHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence            87765410             11   89999987653 233699999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCC
Q 036686          334 QEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPD  413 (508)
Q Consensus       334 ~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~  413 (508)
                      |+++++|++                  |++|||+|+||++|+++. ++|.+++|++++||.|||||.|+++.+++||||+
T Consensus       290 ~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~  350 (428)
T 1cpt_A          290 LALAKSDPA------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEE  350 (428)
T ss_dssp             HHHHHHCGG------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTT
T ss_pred             HHHHHHhHH------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChh
Confidence            999999963                  799999999999999986 7899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccc
Q 036686          414 MWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYA  492 (508)
Q Consensus       414 ~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~  492 (508)
                      +|+||++|+||||.+              .++|||+|+|.|+|++||++|++++++.|+++|+ +++.++ . ..  ...
T Consensus       351 ~~~dP~~F~PeR~~~--------------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~-~~--~~~  412 (428)
T 1cpt_A          351 VFSNPDEFDITRFPN--------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGP-P-RL--VAT  412 (428)
T ss_dssp             TCSSTTSCCTTCCSC--------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSC-C-EE--CCC
T ss_pred             hCCChhhcCCCCCCC--------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCC-c-cc--ccC
Confidence            999999999999831              3899999999999999999999999999999997 787642 1 11  223


Q ss_pred             eeeeecCceeEEeecC
Q 036686          493 FTVVMKNSLKAVILPR  508 (508)
Q Consensus       493 ~~~~~~~~~~v~~~~r  508 (508)
                      .++..+.+++|+++||
T Consensus       413 ~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          413 NFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             SSBCSEEECEEEEEEC
T ss_pred             ccccCcceeeEEeeCC
Confidence            4455667899999986


No 34 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=1.1e-59  Score=447.18  Aligned_cols=373  Identities=16%  Similarity=0.174  Sum_probs=296.2

Q ss_pred             HHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCC--C-CCceEEee-cCccceeeCCCChhHHHH
Q 036686           58 FIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPP--D-SPIRLVFS-VGKCAINSAEYGPLWRSL  132 (508)
Q Consensus        58 ~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~--~-~~~~~~~~-~~~~~~~~~~~~~~w~~~  132 (508)
                      ..+.++ ++||+|+++++ ++.+.++|+||+.+++++.++  .|++++.  . ..+..... .+..++. ..+|+.|+++
T Consensus        23 ~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~h~~~   98 (403)
T 3aba_A           23 DGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLL-WQDEPEHTSD   98 (403)
T ss_dssp             TTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCT-TCCTTHHHHH
T ss_pred             HHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccc-cCCchhHHHH
Confidence            347788 78999999997 899999999999999999764  4666532  1 11100101 0122343 3479999999


Q ss_pred             HHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHHHHHH
Q 036686          133 RRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIESILK  211 (508)
Q Consensus       133 R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~  211 (508)
                      |+.+ .+.|++..++.+.+.+.+.++.+++.+...    ++.+|+...+ ..+++++++. +||.+.++.  +.+.....
T Consensus        99 R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~--~~~~~~~~  170 (403)
T 3aba_A           99 RKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEAR----GGPVDLVKTFANAVPSMVISD-LFGVPVERR--AEFQDIAE  170 (403)
T ss_dssp             HHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHHH----CSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH--HHHHHHHH
T ss_pred             HHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHHHHHHHHH-HcCCCHHHH--HHHHHHHH
Confidence            9955 779999999999999999999999999751    5678998665 4689999997 699887532  33333333


Q ss_pred             HHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCC
Q 036686          212 DVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPT  291 (508)
Q Consensus       212 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  291 (508)
                      .+..    ..   .+   +      ++..++.+.+.+++.+.++++++..             ..   |+++.+++... 
T Consensus       171 ~~~~----~~---~~---p------~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~~ll~~~~-  217 (403)
T 3aba_A          171 AMMR----VD---QD---A------AATEAAGMRLGGLLYQLVQERRANP-------------GD---DLISALITTED-  217 (403)
T ss_dssp             HHSB----SS---SC---H------HHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHTSCC-
T ss_pred             HHHh----cc---Cc---H------HHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHhhcc-
Confidence            2211    00   01   0      3455666778888888888776521             11   79999997653 


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhc
Q 036686          292 GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLR  371 (508)
Q Consensus       292 ~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR  371 (508)
                      ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  .||+|||+|+||
T Consensus       218 ~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lR  279 (403)
T 3aba_A          218 PDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDP------------------SLVGNAVEELLR  279 (403)
T ss_dssp             TTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHh
Confidence            23379999999999999999999999999999999999999999999984                  379999999999


Q ss_pred             CCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCC
Q 036686          372 RHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGR  451 (508)
Q Consensus       372 l~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~  451 (508)
                      ++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||.              ..++|||+|+
T Consensus       280 l~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~--------------~~~l~FG~G~  345 (403)
T 3aba_A          280 YLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP--------------APHLAFGFGA  345 (403)
T ss_dssp             HHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC--------------CCCSTTCCGG
T ss_pred             cCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC--------------CCccCCCCCC
Confidence            99999966789999999999999999999999999999999999999999999972              2589999999


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          452 RICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       452 r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |.|+|++||++|++++++.|+++| +++++++.. +.....+.+++++.+++|++++|
T Consensus       346 r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~~~r  402 (403)
T 3aba_A          346 HQCIGQQLARIELQIVFETLFRRLPGLRLAKPVE-ELRFRHDMVFYGVHELPVTWHHH  402 (403)
T ss_dssp             GSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG-GSCBCTTBSSCCBSCCEEECCCC
T ss_pred             ccCcCHHHHHHHHHHHHHHHHHhCCCceecCCcc-ccccccCcccCCcceeEEEecCC
Confidence            999999999999999999999999 588876421 22233456677889999999987


No 35 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=6.7e-60  Score=449.25  Aligned_cols=375  Identities=17%  Similarity=0.166  Sum_probs=296.6

Q ss_pred             chHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC-C---ceEEeecCccceeeCCCChhHH
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS-P---IRLVFSVGKCAINSAEYGPLWR  130 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~w~  130 (508)
                      +.+..+.++ ++||||+++++++.+.++|++|+.+++++.++  .|++++... .   ..........++.. .+|+.|+
T Consensus        21 ~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~h~   96 (411)
T 3a4g_A           21 NPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP--RLSKDWRHTLPEDQRADMPATPTPMMIL-MDPPDHT   96 (411)
T ss_dssp             CCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT--TEESCGGGGSCGGGCTTCCSCSSCCGGG-CCTTHHH
T ss_pred             CchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC--CcccccccccccccccccCccccccccc-CCchHHH
Confidence            456678888 89999999999999999999999999999765  376654311 0   00011101223433 4799999


Q ss_pred             HHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhH-HHHHHHHhhhhhhhcccccchHHHHHHHHH
Q 036686          131 SLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMS-SCRLTICSILICLCFGAKISEERIKHIESI  209 (508)
Q Consensus       131 ~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~-~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~  209 (508)
                      ++|+.+ .+.|++..++.+.+.+.++++.+++.+..     ++++|+.. +...+++++++.+ ||.+.++  .+.+...
T Consensus        97 ~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~  167 (411)
T 3a4g_A           97 RLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPT-----DGPVDLMREYAFQIPVQVICEL-LGVPAED--RDDFSAW  167 (411)
T ss_dssp             HHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCS-----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG--HHHHHHH
T ss_pred             HHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHhHHHHHHHH-hCCCHHH--HHHHHHH
Confidence            999955 78999999999999999999999998864     35789875 4567899999975 9988753  2334333


Q ss_pred             HHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCC
Q 036686          210 LKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLE  289 (508)
Q Consensus       210 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  289 (508)
                      ...+..    .    .|   +      ++..++.+.+.+++.+.++++++..             ..   |+++.+++..
T Consensus       168 ~~~~~~----~----~p---~------~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---d~l~~ll~~~  214 (411)
T 3a4g_A          168 SSVLVD----D----SP---A------DDKNAAMGKLHGYLSDLLERKRTEP-------------DD---ALLSSLLAVS  214 (411)
T ss_dssp             HHHHTT----S----SC---T------TTHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHHCC
T ss_pred             HHHHhc----c----CC---H------HHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHHhh
Confidence            333221    1    12   0      1334556677788888888776521             11   8999998765


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhh
Q 036686          290 PTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKET  369 (508)
Q Consensus       290 ~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~  369 (508)
                      .+++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  .|++|||+|+
T Consensus       215 ~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~  276 (411)
T 3a4g_A          215 DEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDP------------------SLISSAVEEF  276 (411)
T ss_dssp             CTTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHH
T ss_pred             ccCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH------------------HHHHHHHHHH
Confidence            4223369999999999999999999999999999999999999999999984                  2799999999


Q ss_pred             hcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCC
Q 036686          370 LRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGA  449 (508)
Q Consensus       370 lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~  449 (508)
                      ||++|+++..++|.+++|++++||.||||+.|+++.+++||||++|+||++|+|+||.              ..++|||+
T Consensus       277 lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--------------~~~l~FG~  342 (411)
T 3a4g_A          277 LRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA--------------SGGVFFGH  342 (411)
T ss_dssp             HHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC--------------TTCCTTCC
T ss_pred             HHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC--------------CCCCCCCC
Confidence            9999999966789999999999999999999999999999999999999999999972              24899999


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          450 GRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       450 G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++++.+++|++++|
T Consensus       343 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~~~r  401 (411)
T 3a4g_A          343 GIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLD-ELVYRESTLVRGLSRMPVTMGPR  401 (411)
T ss_dssp             STTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCCCTTBCCBSCCEEECCCC
T ss_pred             CCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCcc-ccccccCccccCcceeEEEecCc
Confidence            99999999999999999999999999 698875321 12223345667788999999987


No 36 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=3.2e-60  Score=452.55  Aligned_cols=393  Identities=17%  Similarity=0.177  Sum_probs=300.9

Q ss_pred             cCCCCCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCC
Q 036686           25 TTGGGPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRP  104 (508)
Q Consensus        25 ~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~  104 (508)
                      ++..++.+.+|||..    +         .+.+..+.++++ ||||   ++++.+.++|++++.+++++.+. ..|++++
T Consensus        12 r~~~~pl~~~PGp~~----~---------~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~   73 (411)
T 2jjn_A           12 RRTLTTIDEVPGMAD----E---------TALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDP   73 (411)
T ss_dssp             -----CCCSCCCSSC----H---------HHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCG
T ss_pred             hcccCCCCCCCCccc----c---------cChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcc
Confidence            345678888999882    1         135566788876 9998   45667899999999999999764 4677664


Q ss_pred             CCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhH-HHHH
Q 036686          105 PDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMS-SCRL  183 (508)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~-~~~~  183 (508)
                      ... +... ..+..++.. .+|+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.  .     ++.+|+.. +...
T Consensus        74 ~~~-~~~~-~~~~~~~~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~--~-----~~~~d~~~~~~~~  142 (411)
T 2jjn_A           74 TRV-IEGA-SPTPGMIHE-IDPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLAD--A-----GESFDLVDVLAFP  142 (411)
T ss_dssp             GGG-STTC-CCCTTCGGG-CCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHT--S-----CSEEEHHHHTTTH
T ss_pred             ccc-CCcc-ccccccccc-CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhc--C-----CCceeHHHHHHHH
Confidence            321 1110 111223433 4799999999965 78999999999999999999998887  1     44789984 4568


Q ss_pred             HHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          184 TICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       184 ~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      +++++++.+ ||.+.++.  +.+.+....+.....   ..+++      ....++..++.+.+.+++.+.++++++..  
T Consensus       143 ~~~~vi~~~-fG~~~~~~--~~~~~~~~~~~~~~~---~~~~~------p~~~~~~~~~~~~~~~~~~~~i~~r~~~~--  208 (411)
T 2jjn_A          143 LPVTIVAEL-LGLPPMDH--EQFGDWSGALVDIQM---DDPTD------PALAERIADVLNPLTAYLKARCAERRADP--  208 (411)
T ss_dssp             HHHHHHHHH-HTCCSCCC--STTCCHHHHHHHSCC---SCTTC------HHHHHHHHHHHHHHHHHHHHHHHHHHHSC--
T ss_pred             HHHHHHHHH-cCCCHHHH--HHHHHHHHHHHhccC---ccccc------hHHHHHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence            999999998 99987432  122233333332211   11110      12234556677788888888888776511  


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVA  343 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~  343 (508)
                                 ..   |+++.+++... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ 
T Consensus       209 -----------~~---d~l~~ll~~~~-~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-  272 (411)
T 2jjn_A          209 -----------GD---DLISRLVLAEV-DGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG-  272 (411)
T ss_dssp             -----------CS---SHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG-
T ss_pred             -----------CC---CHHHHHHhccc-CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-
Confidence                       11   89999987654 233699999999999999999999999999999999999999999999964 


Q ss_pred             HhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 036686          344 AVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRP  423 (508)
Q Consensus       344 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p  423 (508)
                                       |++|||+|+||++|+++. ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||
T Consensus       273 -----------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P  334 (411)
T 2jjn_A          273 -----------------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDP  334 (411)
T ss_dssp             -----------------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCT
T ss_pred             -----------------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCC
Confidence                             899999999999999986 78999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccceeeeecCcee
Q 036686          424 ERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYAFTVVMKNSLK  502 (508)
Q Consensus       424 ~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (508)
                      |||.+            ...++|||+|+|.|+|++||++|++++++.|+++|+ ++++++.  ++....+.++..+.+++
T Consensus       335 eR~~~------------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~lp  400 (411)
T 2jjn_A          335 SRKSG------------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDD--ERLRHFEQIVLGTRHLP  400 (411)
T ss_dssp             TCCCS------------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSS--CCCCBCCSSSSSBSCCE
T ss_pred             CCCCC------------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCC--ceeccccccccCcceeE
Confidence            99742            135899999999999999999999999999999996 9987432  22213445666778899


Q ss_pred             EEeecC
Q 036686          503 AVILPR  508 (508)
Q Consensus       503 v~~~~r  508 (508)
                      |+++||
T Consensus       401 v~~~~~  406 (411)
T 2jjn_A          401 VLAGSS  406 (411)
T ss_dssp             EECSCC
T ss_pred             EEecCC
Confidence            999875


No 37 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=1.1e-59  Score=448.66  Aligned_cols=378  Identities=17%  Similarity=0.184  Sum_probs=295.9

Q ss_pred             chHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc---eEEeecCccceeeCCCChhHHH
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI---RLVFSVGKCAINSAEYGPLWRS  131 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~w~~  131 (508)
                      +.+..+.++ ++||||+++++++.+.++|++|+.+++++.++ ..|+.++.....   .........++.. .+|+.|++
T Consensus        14 ~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~h~~   90 (404)
T 3ejb_B           14 NPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLF-QNQPDHRR   90 (404)
T ss_dssp             CHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGG-CCTTHHHH
T ss_pred             CchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhh-cCCchHHH
Confidence            456667777 58999999999999999999999999999776 567665432111   0001111223433 47999999


Q ss_pred             HHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHH-HHHHHHhhhhhhhcccccchHHHHHHHHHH
Q 036686          132 LRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS-CRLTICSILICLCFGAKISEERIKHIESIL  210 (508)
Q Consensus       132 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~  210 (508)
                      +||.+ .+.|++..++.+.+.+.++++.+++.+.+     +..+|+... ...++.++++. +||.+.++  .+.+.+..
T Consensus        91 ~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~  161 (404)
T 3ejb_B           91 LRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQG-----KKKMEVISDFAFPLASFVIAN-IIGVPEED--REQLKEWA  161 (404)
T ss_dssp             HHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTT-----TSEEEHHHHTHHHHHHHHHHH-HHTCCGGG--HHHHHHHH
T ss_pred             HHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcchHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHH
Confidence            99965 78999999999999999999999998864     556887655 45688888888 48987643  23444444


Q ss_pred             HHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCC
Q 036686          211 KDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEP  290 (508)
Q Consensus       211 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  290 (508)
                      ..+.....      .|..    ....++..+..+.+.+++.+.+++++...             ..   |+++.++ ...
T Consensus       162 ~~~~~~~~------~p~~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---d~l~~ll-~~~  214 (404)
T 3ejb_B          162 ASLIQTID------FTRS----RKALTEGNIMAVQAMAYFKELIQKRKRHP-------------QQ---DMISMLL-KGR  214 (404)
T ss_dssp             HHHHGGGS------TTCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHH-HC-
T ss_pred             HHHHHhcc------CCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------cc---hHHHHHH-hcc
Confidence            44432221      1221    12345566777788888888888776421             11   7899998 332


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhh
Q 036686          291 TGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETL  370 (508)
Q Consensus       291 ~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~l  370 (508)
                       ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|+|
T Consensus       215 -~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l  275 (404)
T 3ejb_B          215 -EKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------LIGTAVEECL  275 (404)
T ss_dssp             ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHH
T ss_pred             -cCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHH
Confidence             234799999999999999999999999999999999999999999999853                  6999999999


Q ss_pred             cCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCC
Q 036686          371 RRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAG  450 (508)
Q Consensus       371 Rl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G  450 (508)
                      |++|+++ .++|.+++|++++||.||||+.|+++.+++||||++|+||++|+|+||              ...++|||+|
T Consensus       276 Rl~p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~--------------~~~~~~Fg~G  340 (404)
T 3ejb_B          276 RYESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRS--------------PNPHLSFGHG  340 (404)
T ss_dssp             HHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCS--------------SCCCCTTCCS
T ss_pred             HhCCccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCC--------------CCCCCCCCCc
Confidence            9999999 578999999999999999999999999999999999999999999998              1348999999


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          451 RRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       451 ~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +|.|+|++||++|+++++++|+++| +++++++.   .....+.+++....++|+++||
T Consensus       341 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---~~~~~~~~~~~~~~lpv~~~~~  396 (404)
T 3ejb_B          341 HHVCLGSSLARLEAQIAINTLLQRMPSLNLADFE---WRYRPLFGFRALEELPVTFEAS  396 (404)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--C---CCBCSCSSBCCBSCCEEECC--
T ss_pred             CccCcCHHHHHHHHHHHHHHHHHhCcccccCCCC---ceeccCcccCCcceeEEEEecc
Confidence            9999999999999999999999999 99998532   2234456778889999999986


No 38 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=3.1e-59  Score=445.54  Aligned_cols=392  Identities=16%  Similarity=0.155  Sum_probs=301.1

Q ss_pred             CCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHh-CCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC
Q 036686           31 KNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKY-GPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP  108 (508)
Q Consensus        31 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~  108 (508)
                      .+.||+|+++|.+.....+..   +.+..+.++ ++| |||+++++ ++.+.++|+||+.++++|.++  .|++.+....
T Consensus         4 ~~~~~~~~~~P~~~~~~~~~~---~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~   77 (412)
T 2zbx_A            4 TATTPQTTDAPAFPSNRSCPY---QLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDN   77 (412)
T ss_dssp             ----CCCCSSCBSSCCCSSTT---SCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTT
T ss_pred             CCCCCCCCCCCCCCCCchhcc---ChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCccccc
Confidence            345788888876533333332   445568888 777 99999998 889999999999999999654  3444332111


Q ss_pred             ceE-------EeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH
Q 036686          109 IRL-------VFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC  181 (508)
Q Consensus       109 ~~~-------~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~  181 (508)
                      +..       ....+. ++.. .+|+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+...    ++.+|+...+
T Consensus        78 ~~~~~~~~~~~~~~~~-~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~d~~~~~  150 (412)
T 2zbx_A           78 FPATSPRFEAVRESPQ-AFIG-LDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLAA----GPTADLVSQF  150 (412)
T ss_dssp             SCCCSGGGC----CCC-CGGG-CCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHH----CSCEEHHHHT
T ss_pred             cccccccccccccccc-cccc-CCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHH
Confidence            111       100111 3433 4799999999955 679999999999999999999999999742    5679998877


Q ss_pred             H-HHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 036686          182 R-LTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAF  260 (508)
Q Consensus       182 ~-~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  260 (508)
                      . .+++++++. +||.+.++  .+.+......++...        +       .  ++..++.+.+.+++.+.++++++.
T Consensus       151 ~~~~~~~vi~~-~~G~~~~~--~~~~~~~~~~~~~~~--------~-------~--~~~~~~~~~~~~~~~~~i~~r~~~  210 (412)
T 2zbx_A          151 ALPVPSMVICR-LLGVPYAD--HEFFQDASKRLVQST--------D-------A--QSALTARNDLAGYLDGLITQFQTE  210 (412)
T ss_dssp             TTHHHHHHHHH-HHTCCGGG--HHHHHHHHHHHHHCS--------S-------H--HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHhccC--------c-------H--HHHHHHHHHHHHHHHHHHHHHHhC
Confidence            6 488899986 69988643  234444444333210        0       1  345566677888888888877652


Q ss_pred             HhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHH
Q 036686          261 VEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKE  340 (508)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~E  340 (508)
                      .             ..   |+++.+++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|
T Consensus       211 ~-------------~~---d~l~~ll~~~~~-~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e  273 (412)
T 2zbx_A          211 P-------------GA---GLVGALVADQLA-NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD  273 (412)
T ss_dssp             C-------------CS---SHHHHHHHTTTT-TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHC
T ss_pred             C-------------CC---CHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhC
Confidence            1             11   899999876542 336999999999999999999999999999999999999999999987


Q ss_pred             HHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCC
Q 036686          341 IVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGE  420 (508)
Q Consensus       341 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  420 (508)
                      +                  .|++|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|+||++
T Consensus       274 ~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~  335 (412)
T 2zbx_A          274 R------------------SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA  335 (412)
T ss_dssp             G------------------GGHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred             h------------------HhHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccc
Confidence            4                  2799999999999999996678999999999999999999999999999999999999999


Q ss_pred             CCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecC
Q 036686          421 FRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKN  499 (508)
Q Consensus       421 F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~  499 (508)
                      |+||||              ...++|||+|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++...
T Consensus       336 F~PeR~--------------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~g~~  400 (412)
T 2zbx_A          336 LDIHRS--------------ARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVE-QLVLRPGTTIQGVN  400 (412)
T ss_dssp             CCTTSC--------------CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GSCBCCTTSCCCBS
T ss_pred             cCCCCC--------------CCCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcc-cceeccccccCCcc
Confidence            999996              13589999999999999999999999999999999 799875321 22233445566666


Q ss_pred             ceeEEe
Q 036686          500 SLKAVI  505 (508)
Q Consensus       500 ~~~v~~  505 (508)
                      .++|+.
T Consensus       401 ~lpv~~  406 (412)
T 2zbx_A          401 ELPVTW  406 (412)
T ss_dssp             CCEEEC
T ss_pred             eeeeec
Confidence            777764


No 39 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=6.9e-60  Score=448.60  Aligned_cols=371  Identities=12%  Similarity=0.104  Sum_probs=297.6

Q ss_pred             CchHHHHHHHHHHh--CCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHH
Q 036686           54 RHFIFIVRDLRKKY--GPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRS  131 (508)
Q Consensus        54 ~~~~~~~~~~~~~y--G~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  131 (508)
                      .+.+..+.+|+++|  |||+++.+++ +.++|+||+.+++++ ++...|++++........ ..+...+ ...+|+.|++
T Consensus        19 ~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~-~~~~~~~-~~~~g~~~~~   94 (398)
T 4fb2_A           19 GTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYET-GEFELMM-AGQDDPVHKK   94 (398)
T ss_dssp             SSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC-----CCCTT-TTCCTTHHHH
T ss_pred             cChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCC-cccccCc-ccCCchHHHH
Confidence            35677799999999  9999998875 589999999999999 445678776654332111 1122222 3457999999


Q ss_pred             HHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHHHHH
Q 036686          132 LRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIESIL  210 (508)
Q Consensus       132 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~~~~  210 (508)
                      +|+.+ .+.|++..++.+.+.+.+.++.+++.+..     ...+|+...+ ..+++++++. +||.+.++  .+.+.+..
T Consensus        95 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~  165 (398)
T 4fb2_A           95 YRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIE-----LGEGDAATWLANEIPARLTAI-LLGLPPED--GDTYRRWV  165 (398)
T ss_dssp             HHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTT-----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG--HHHHHHHH
T ss_pred             HHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh-----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHH
Confidence            99965 78999999999999999999999988864     3457875554 6789999998 69987643  34455555


Q ss_pred             HHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCC
Q 036686          211 KDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEP  290 (508)
Q Consensus       211 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  290 (508)
                      ..+....       .          ..+..++.+.+.+++.+.++++++..             ..   |+++.+++...
T Consensus       166 ~~~~~~~-------~----------~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---d~l~~ll~~~~  212 (398)
T 4fb2_A          166 WAITHVE-------N----------PEEGAEIFAELVAHARTLIAERRTNP-------------GN---DIMSRVIMSKI  212 (398)
T ss_dssp             HHHHHCC-------C----------HHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHHCCB
T ss_pred             HHHhcCC-------C----------HHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHHccc
Confidence            4443210       0          12455667778888888888877621             11   89999998754


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhh
Q 036686          291 TGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETL  370 (508)
Q Consensus       291 ~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~l  370 (508)
                      + +..++++++++++..+++||+|||+++++|++++|++||++|+++++|++                  +++|||+|+|
T Consensus       213 ~-~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l  273 (398)
T 4fb2_A          213 D-GESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------LIPNAVDELL  273 (398)
T ss_dssp             T-TBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHH
T ss_pred             C-CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHH
Confidence            3 33699999999999999999999999999999999999999999999964                  6789999999


Q ss_pred             cCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCC
Q 036686          371 RRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAG  450 (508)
Q Consensus       371 Rl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G  450 (508)
                      |++|+++  ++|.+++|++++||.||||+.|+++.+++||||++|+||++|+|+||              ...|+|||+|
T Consensus       274 Rl~p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~--------------~~~~~~FG~G  337 (398)
T 4fb2_A          274 RFYGPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERT--------------PNRHLSLGHG  337 (398)
T ss_dssp             HHHCCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCC--------------SCCCCTTCCS
T ss_pred             HhCCCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCC--------------CCCCCCCCCC
Confidence            9999998  68999999999999999999999999999999999999999999997              2358999999


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          451 RRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       451 ~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +|.|+|++||.+|++++++.|+++| +++++++.....  . ...+..+..++|+++||
T Consensus       338 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~--~-~~~~~~~~~lpv~~~~~  393 (398)
T 4fb2_A          338 IHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKECEW--L-MGQVAGMLHVPIIFPKG  393 (398)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTSCCEE--E-CSSBCEEEECEEECCCC
T ss_pred             CcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCCCcee--c-cccccccceeEEEEcCC
Confidence            9999999999999999999999999 999987653222  2 23445556799999875


No 40 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=3.9e-60  Score=451.09  Aligned_cols=395  Identities=17%  Similarity=0.110  Sum_probs=306.6

Q ss_pred             CCCCCCCCCCCCCccc--cchhhhhh--hcCchHHHHHHHHHHhC--CeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcC
Q 036686           28 GGPKNLPPGPRGWPLV--GNLVQVIL--QRRHFIFIVRDLRKKYG--PIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFA  101 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~--G~~~~~~~--~~~~~~~~~~~~~~~yG--~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~  101 (508)
                      ..+.+.||||.+.|..  +..-.+..  ...+.+..+.+|+ +||  +|+++...| +.++|+|++.+++++.+ ...|+
T Consensus         7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f~   83 (415)
T 2zwu_A            7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHFS   83 (415)
T ss_dssp             ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTEE
T ss_pred             cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccccC
Confidence            4567889999999864  43211111  1345777888885 799  999998333 68999999999999964 45687


Q ss_pred             CCCCCCCceEEeecCccc-eeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHH
Q 036686          102 SRPPDSPIRLVFSVGKCA-INSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS  180 (508)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~  180 (508)
                      +++....... ...+ .+ +.. .+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+...     +.+|+..+
T Consensus        84 ~~~~~~~~~~-~~~~-~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~d~~~~  154 (415)
T 2zwu_A           84 SECPFIPREA-GEAY-DFIPTS-MDPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRPQ-----GQCNFTED  154 (415)
T ss_dssp             TTSCSSSHHH-HHHC-CCTTTT-CCTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGGG-----TEEEHHHH
T ss_pred             CCcccCCCCc-cccc-cccCcc-CCCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccHHHH
Confidence            7651111110 0112 22 333 4799999999965 789999999999999999999999999752     37899975


Q ss_pred             H-HHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 036686          181 C-RLTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKA  259 (508)
Q Consensus       181 ~-~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  259 (508)
                      + ..+++++++.+ ||.+.++.  +.+.+....+...    .   .|.          +..++.+.+.+++.+.++++++
T Consensus       155 ~~~~~~~~vi~~~-~G~~~~~~--~~~~~~~~~~~~~----~---~P~----------~~~~~~~~~~~~~~~~i~~r~~  214 (415)
T 2zwu_A          155 YAEPFPIRIFMLL-AGLPEEDI--PHLKYLTDQMTRP----D---GSM----------TFAEAKEALYDYLIPIIEQRRQ  214 (415)
T ss_dssp             TTTHHHHHHHHHH-HTCCGGGH--HHHHHHHHHHHSC----C---SSS----------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-cCCCHHHH--HHHHHHHHHHHhc----c---CHH----------HHHHHHHHHHHHHHHHHHHHHh
Confidence            5 78999999998 99987542  3444444433321    0   121          2345566777888888887765


Q ss_pred             HHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHH
Q 036686          260 FVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYK  339 (508)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~  339 (508)
                      ..             ..   |+++.+++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|+++++
T Consensus       215 ~~-------------~~---dll~~ll~~~~~-~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~  277 (415)
T 2zwu_A          215 KP-------------GT---DAISIVANGQVN-GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIE  277 (415)
T ss_dssp             SC-------------CS---SHHHHHHTCEET-TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             CC-------------CC---CHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHh
Confidence            21             11   899999876432 23699999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCC
Q 036686          340 EIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPG  419 (508)
Q Consensus       340 Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  419 (508)
                      |++                  |++|||+|+||++|+++. + |.+.+|++++||.||||+.|+++.+++||||++|+||+
T Consensus       278 E~~------------------~l~a~i~E~lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~  337 (415)
T 2zwu_A          278 RPE------------------RIPAACEELLRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPM  337 (415)
T ss_dssp             CGG------------------GHHHHHHHHHHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTT
T ss_pred             CHH------------------HHHHHHHHHHhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCcc
Confidence            953                  799999999999999995 7 99999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccceeeeec
Q 036686          420 EFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYAFTVVMK  498 (508)
Q Consensus       420 ~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~  498 (508)
                      +|+|+||-              ..|+|||+|+|.|+|++||++|++++++.|+++|+ ++++++.  ++. ..+.++.++
T Consensus       338 ~F~PeR~~--------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~-~~~~~~~~~  400 (415)
T 2zwu_A          338 HVDFSRQK--------------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGA--QIQ-HKSGIVSGV  400 (415)
T ss_dssp             SCCTTCSS--------------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTC--CCC-EECSSBCEE
T ss_pred             ccCCCCCC--------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCc--ccc-cCCccccCc
Confidence            99999951              35899999999999999999999999999999998 9988632  221 334567778


Q ss_pred             CceeEEeecC
Q 036686          499 NSLKAVILPR  508 (508)
Q Consensus       499 ~~~~v~~~~r  508 (508)
                      .+++|+++||
T Consensus       401 ~~lpv~~~~r  410 (415)
T 2zwu_A          401 QALPLVWDPA  410 (415)
T ss_dssp             SCCEEECCGG
T ss_pred             ceeEEEEecC
Confidence            8999999986


No 41 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=8.2e-60  Score=448.66  Aligned_cols=388  Identities=17%  Similarity=0.189  Sum_probs=299.1

Q ss_pred             CCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEc-CCee-EEEeCCHHHHHHHHHhcCCCcCCCCCCCCc
Q 036686           32 NLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQM-GQRT-VVIVTSSQLIHEALVQRGPEFASRPPDSPI  109 (508)
Q Consensus        32 ~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~-~vvv~~p~~~~~il~~~~~~~~~~~~~~~~  109 (508)
                      ..+|+|+.+|+.++..      .+.+..+.+++ +||||+++.+ +|.+ .++|+||+.++++|.+  ..|.+++....+
T Consensus         8 ~~~~~~~~~p~~~~~~------~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~   78 (406)
T 1s1f_A            8 QAVPPVRDWPAVDLPG------SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQ   78 (406)
T ss_dssp             CCSCCEEECCCCCCCT------TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTT
T ss_pred             hhccCCCCCCCCcccc------cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCC
Confidence            4567777788877622      23445577775 7999999996 5666 9999999999999965  367666543211


Q ss_pred             e----E-EeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HH
Q 036686          110 R----L-VFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RL  183 (508)
Q Consensus       110 ~----~-~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~  183 (508)
                      .    . ..+. ..++.+ .+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+...    ++++|+...+ ..
T Consensus        79 ~~~~~~~~~~~-~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~  151 (406)
T 1s1f_A           79 VTRLAPHFIPA-RGAVGF-LDPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLRA----GPPADLTEAVLSP  151 (406)
T ss_dssp             BCBSSSSCSSC-TTSGGG-CCTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHHH----CSSEEHHHHTTTH
T ss_pred             ccccccccccc-cccccc-CCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHHhhH
Confidence            1    0 1111 223444 4799999999965 678999999999999999999999999741    5578988666 47


Q ss_pred             HHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 036686          184 TICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEK  263 (508)
Q Consensus       184 ~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (508)
                      +++++++. +||.+.++.  +.+......+......      +          ++..++.+.+.+++.+.++++++.   
T Consensus       152 ~~~~vi~~-~~G~~~~~~--~~~~~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~~~~i~~r~~~---  209 (406)
T 1s1f_A          152 FPIAVICE-LMGVPATDR--HSMHTWTQLILSSSHG------A----------EVSERAKNEMNAYFSDLIGLRSDS---  209 (406)
T ss_dssp             HHHHHHHH-HHTCCGGGH--HHHHHHHHHHHHHHTT------C----------CCCHHHHTHHHHHHHHHHHTSCCS---
T ss_pred             hHHHHHHH-HhCCCHHHH--HHHHHHHHHHHhccCC------H----------HHHHHHHHHHHHHHHHHHHHHHhC---
Confidence            89999988 599887542  3444444443332110      1          122344556667777777665431   


Q ss_pred             CCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 036686          264 GQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVA  343 (508)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~  343 (508)
                                ...   |+++.+++...+  +.++++++.+++..+++|| |||+++++|++++|++||++|+++++|++ 
T Consensus       210 ----------~~~---d~l~~ll~~~~~--~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-  272 (406)
T 1s1f_A          210 ----------AGE---DVTSLLGAAVGR--DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE-  272 (406)
T ss_dssp             ----------CCC---SHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG-
T ss_pred             ----------CCC---CHHHHHHHhhcc--cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH-
Confidence                      011   788888875322  4699999999999999999 99999999999999999999999999853 


Q ss_pred             HhcCCCCCCcccccCCchHHHHHHhhhcCCCCCC-cccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCC
Q 036686          344 AVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGH-FLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFR  422 (508)
Q Consensus       344 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  422 (508)
                                       |++|||+|+||++|+++ ..++|.+++|++++||.|||||.|+++.+++||||++|+||++|+
T Consensus       273 -----------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~  335 (406)
T 1s1f_A          273 -----------------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID  335 (406)
T ss_dssp             -----------------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCC
T ss_pred             -----------------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeC
Confidence                             79999999999999999 457899999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCce
Q 036686          423 PERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSL  501 (508)
Q Consensus       423 p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (508)
                      |+||.              ..++|||+|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++...++
T Consensus       336 PeR~~--------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~l  400 (406)
T 1s1f_A          336 FERSP--------------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE-DVPFKKGALIRGPEAL  400 (406)
T ss_dssp             TTC----------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG-GSCBCSSCSBCCBSCC
T ss_pred             CCCCC--------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCc-cceeccCcccCCccee
Confidence            99984              2489999999999999999999999999999999 799887521 2223345567778889


Q ss_pred             eEEee
Q 036686          502 KAVIL  506 (508)
Q Consensus       502 ~v~~~  506 (508)
                      +|++.
T Consensus       401 pv~~~  405 (406)
T 1s1f_A          401 PVTWH  405 (406)
T ss_dssp             EEECC
T ss_pred             EEeeC
Confidence            98864


No 42 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=6.3e-61  Score=470.82  Aligned_cols=426  Identities=15%  Similarity=0.154  Sum_probs=294.0

Q ss_pred             CCCCCCCCCCCCCCCccccchhhhhh--hcCchHHHHHHHHHHhCC-eEEEEcCCeeE-------EEeCCHHHHHHHHHh
Q 036686           26 TGGGPKNLPPGPRGWPLVGNLVQVIL--QRRHFIFIVRDLRKKYGP-IFTMQMGQRTV-------VIVTSSQLIHEALVQ   95 (508)
Q Consensus        26 ~~~~~~~~ppgP~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------vvv~~p~~~~~il~~   95 (508)
                      ....|.+.||||++||++|+++.+..  ...+.+.++.++++|||+ ||++++++.++       +++.+++..+.++..
T Consensus        22 ~~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~  101 (495)
T 3dsk_A           22 SKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDV  101 (495)
T ss_dssp             --CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred             CCCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccc
Confidence            34457889999999999999988753  245677889999999999 99999988877       667777766655532


Q ss_pred             cC----CCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccC
Q 036686           96 RG----PEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDN  171 (508)
Q Consensus        96 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~  171 (508)
                      ..    ..+..... ... .+++..........+|+.|+++|+.+ .+.|++.. +.+.+.+.+.++.+++.|...... 
T Consensus       102 ~~v~k~~~~~~~~~-~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~-  176 (495)
T 3dsk_A          102 DKVEKKDLLTGTYM-PST-ELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKELSL-  176 (495)
T ss_dssp             TTEECSSCTTSSSC-CCG-GGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             ccccccccccccCC-CCc-cccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            11    11211111 111 22321111233345799999999855 66787754 888999999999999999764333 


Q ss_pred             CccchhhHHHHHHHHhhhhhhhcccccchHH-HHHHHHHHHHHHHhcC-CCcccccccchhhhHhHHHHHHHHHHH-HHH
Q 036686          172 DLFVEVMSSCRLTICSILICLCFGAKISEER-IKHIESILKDVMLITS-PQLPDFLPILTPLFRRQMREAKELRKR-QME  248 (508)
Q Consensus       172 ~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~p~l~~~~~~~~~~~~~~~~~-~~~  248 (508)
                      ++.+|+..++..+++++++..+||.+.+... .+.+............ ......+|.+       .......+.+ -..
T Consensus       177 ~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~-------~~~~~~~~~~~~~~  249 (495)
T 3dsk_A          177 KGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNLHPLLSIGLPRV-------IEEPLIHTFSLPPA  249 (495)
T ss_dssp             HSSEESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSSCHH-------HHHHHHSSSCCCGG
T ss_pred             CCCccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhhhhHhHhccHHH-------HHHHHHHhhcccch
Confidence            5589999999999999999999999875431 1112222222221110 0001112211       0000000000 000


Q ss_pred             HhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHH-HcCchhHHHHHHHHHHHH
Q 036686          249 CLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVI-SAGTDTSATTAEWAMHHL  327 (508)
Q Consensus       249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~-~AG~~tt~~~l~~~l~~L  327 (508)
                      .+....++..+...                 +..+.+++..  ++.+++++|++++++.++ +||++||+.+++|++++|
T Consensus       250 ~~~~~~~~~~~~~~-----------------~~~~~ll~~~--~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L  310 (495)
T 3dsk_A          250 LVKSDYQRLYEFFL-----------------ESAGEILVEA--DKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRI  310 (495)
T ss_dssp             GGHHHHHHHHHHHH-----------------HHCHHHHHHH--HHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHH-----------------HHHHHHHHHH--HhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            00000000000000                 1222233222  123789999998776665 999999999999999999


Q ss_pred             hh-ChHHHHHHHHHHHHHhcCC-CCCCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc----CCeeeCCCCEE
Q 036686          328 VL-NQEIQEKLYKEIVAAVGKD-GLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL----GGYSIPAGVHV  401 (508)
Q Consensus       328 ~~-~P~~~~~lr~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~----~g~~ip~G~~v  401 (508)
                      +. ||++|+++|+|++++++++ +.++++++++||||+|||+|+||++|+++... |.+.+|+++    +||.||||+.|
T Consensus       311 ~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG~~v  389 (495)
T 3dsk_A          311 GRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEML  389 (495)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEE
T ss_pred             HhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCCCEE
Confidence            95 9999999999999998764 56899999999999999999999999999865 668999999    49999999999


Q ss_pred             EEcccccccCCCCCCCCCCCCCCcccCCCCCCc--cccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhceeec
Q 036686          402 EFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDV--DVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYKWLP  479 (508)
Q Consensus       402 ~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~--~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~  479 (508)
                      +++.+++|+||++|+||++|||+||+++++...  ...-.....++|||+|+|.|+|++||.+|++++++.|+++|++..
T Consensus       390 ~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~  469 (495)
T 3dsk_A          390 YGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFD  469 (495)
T ss_dssp             EEEHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred             EeccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEe
Confidence            999999999999999999999999997532100  000011224556666669999999999999999999999999977


Q ss_pred             CCCC
Q 036686          480 VPGA  483 (508)
Q Consensus       480 ~~~~  483 (508)
                      .++.
T Consensus       470 ~~~~  473 (495)
T 3dsk_A          470 IEVG  473 (495)
T ss_dssp             EEEE
T ss_pred             CCCC
Confidence            6533


No 43 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=3e-59  Score=445.36  Aligned_cols=379  Identities=18%  Similarity=0.183  Sum_probs=295.8

Q ss_pred             CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCC--CCCc---e---EEeec-CccceeeCC
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPP--DSPI---R---LVFSV-GKCAINSAE  124 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~--~~~~---~---~~~~~-~~~~~~~~~  124 (508)
                      .+.+..+.++ ++||||+++++++.+.++|+||+.+++++.++.  +++.+.  ...+   .   .+.+. +..++.. .
T Consensus        15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~   90 (408)
T 1odo_A           15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFT-A   90 (408)
T ss_dssp             TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGG-C
T ss_pred             CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccccc-c
Confidence            3567778999 899999999998899999999999999996542  333221  1100   0   00000 1113333 4


Q ss_pred             CChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHH-HHHHhhhhhhhcccccchHHH
Q 036686          125 YGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCR-LTICSILICLCFGAKISEERI  203 (508)
Q Consensus       125 ~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fg~~~~~~~~  203 (508)
                      +|+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+.+.. . ++.+|+..++. .+++++++. +||.+.++  .
T Consensus        91 ~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~  164 (408)
T 1odo_A           91 YGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAELP-A-GEPVDLRQELAYPLPIAVIGH-LMGVPQDR--R  164 (408)
T ss_dssp             CHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHSC-T-TSCEEHHHHTTTHHHHHHHHH-HHTCCHHH--H
T ss_pred             CChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhhc-C-CCCcchHHHHhhhhHHHHHHH-HhCCCHHH--H
Confidence            799999999955 7899999999999999999999999997531 1 56799998876 599999996 69987542  2


Q ss_pred             HHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHH
Q 036686          204 KHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVD  283 (508)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (508)
                      +.+......++..   .    .+         .++..++.+.+.+++.+.++++++..             ..   |+++
T Consensus       165 ~~~~~~~~~~~~~---~----~~---------~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---d~l~  212 (408)
T 1odo_A          165 DGFRALVDGVFDT---T----LD---------QAEAQANTARLYEVLDQLIAAKRATP-------------GD---DMTS  212 (408)
T ss_dssp             HHHHHHHHHHHCT---T----CC---------HHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHH
T ss_pred             HHHHHHHHHHhcc---c----CC---------HHHHHHHHHHHHHHHHHHHHHHhhCC-------------CC---CHHH
Confidence            3344444333210   0    11         13445666778888888888776521             11   7888


Q ss_pred             hhhcCCCCC--CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCch
Q 036686          284 SLFGLEPTG--REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPY  361 (508)
Q Consensus       284 ~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~  361 (508)
                      .+++...++  +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  ++
T Consensus       213 ~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~  274 (408)
T 1odo_A          213 LLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------------VT  274 (408)
T ss_dssp             HHHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS------------------SC
T ss_pred             HHHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HH
Confidence            888754321  2369999999999999999999999999999999999999999999872                  36


Q ss_pred             HHHHHHhhhcCCCCCCcccccccccccccC-CeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCC
Q 036686          362 LDAVVKETLRRHPPGHFLLSHAAIKDTELG-GYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTR  440 (508)
Q Consensus       362 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~  440 (508)
                      ++|||+|+||++|+++..++|.+++|++++ ||.|||||.|+++.+++||||++|+||++|+||||              
T Consensus       275 l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~--------------  340 (408)
T 1odo_A          275 WADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT--------------  340 (408)
T ss_dssp             HHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS--------------
T ss_pred             HHHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC--------------
Confidence            999999999999999976789999999999 99999999999999999999999999999999993              


Q ss_pred             CCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          441 GVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       441 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                      ...|+|||+|+|.|+|++||++|++++++.|+++| +++++.+.. +.....+.+++++.+++|+++|
T Consensus       341 ~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          341 VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAE-ELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTS-CCCBCSCSSBCCBSCCEEECC-
T ss_pred             CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCcc-ccccccCccccCcccceEEecC
Confidence            13699999999999999999999999999999999 799875322 2333455677888999999986


No 44 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=6e-60  Score=461.56  Aligned_cols=423  Identities=15%  Similarity=0.168  Sum_probs=291.2

Q ss_pred             CCCCCCCCCCCCCccccchhhhhhh--cC-chHHHHHHHHHHhCC-eEEEEcCC-------eeEEEeCCHHHHHHHHHh-
Q 036686           28 GGPKNLPPGPRGWPLVGNLVQVILQ--RR-HFIFIVRDLRKKYGP-IFTMQMGQ-------RTVVIVTSSQLIHEALVQ-   95 (508)
Q Consensus        28 ~~~~~~ppgP~~~p~~G~~~~~~~~--~~-~~~~~~~~~~~~yG~-v~~~~~~~-------~~~vvv~~p~~~~~il~~-   95 (508)
                      ..|.+.+|||++||++|+++.+...  .. +.+.++.+++++||+ ||++++++       ...+++.+....+.++.. 
T Consensus         5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~   84 (473)
T 3dan_A            5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS   84 (473)
T ss_dssp             GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred             CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence            4578889999999999999887532  34 677889999999999 99999863       344555555544444421 


Q ss_pred             ---cCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCC
Q 036686           96 ---RGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDND  172 (508)
Q Consensus        96 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~  172 (508)
                         +...+...... .. ..++..........+|+.|+++|+.+ .+.|++. ++.+.+.+.+.++.+++.+...... +
T Consensus        85 ~~~~~~~~~~~~~~-~~-~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~-~  159 (473)
T 3dan_A           85 KVEKKDLFTGTYMP-ST-KLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFETTYTELFEGLEAELAK-N  159 (473)
T ss_dssp             TEECSSCTTSSSCC-CG-GGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             ceeccccccccccC-Cc-cccCCCcceeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcc-C
Confidence               11112111111 11 11221112233345799999999855 6788884 8999999999999999999764333 5


Q ss_pred             ccchhhHHHHHHHHhhhhhhhcccccchHHH-HHHHHHHHHHHHhcC-CCcccccccch-hhhHhHHH----HHHHHHHH
Q 036686          173 LFVEVMSSCRLTICSILICLCFGAKISEERI-KHIESILKDVMLITS-PQLPDFLPILT-PLFRRQMR----EAKELRKR  245 (508)
Q Consensus       173 ~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~p~l~-~~~~~~~~----~~~~~~~~  245 (508)
                      +.+|+.+++..+++++++.++||.+++.... +.+......+..... ..+...+|.+. .+.....+    ...+..+.
T Consensus       160 ~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~  239 (473)
T 3dan_A          160 GKAAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNK  239 (473)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHSSSCCCGGGTHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHHHHhccchhhhcchHHHHHHHhhhccchHhhhhhchhh
Confidence            5899999999999999999999998754211 111122221111100 00001122110 00000000    00111111


Q ss_pred             HHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHH-HcCchhHHHHHHHHH
Q 036686          246 QMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVI-SAGTDTSATTAEWAM  324 (508)
Q Consensus       246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~-~AG~~tt~~~l~~~l  324 (508)
                      +.+.+.                            ++++.+++...  +.+++++++.++++.++ +||++||+++++|++
T Consensus       240 ~~~~~~----------------------------~~~~~ll~~~~--~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l  289 (473)
T 3dan_A          240 LYDYFQ----------------------------SVATPVMEQAE--KLGVPKDEAVHNILFAVCFNTFGGVKILFPNTL  289 (473)
T ss_dssp             HHHHHH----------------------------HHCHHHHHHHH--HHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hHHHHH----------------------------HHHHHHHHhHh--hcCCCHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence            111111                            33333443211  13689999999887666 888999999999999


Q ss_pred             HHHhh-ChHHHHHHHHHHHHHhcC-C-CCCCcccccCCchHHHHHHhhhcCCCCCCccccccccccccc----CCeeeCC
Q 036686          325 HHLVL-NQEIQEKLYKEIVAAVGK-D-GLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTEL----GGYSIPA  397 (508)
Q Consensus       325 ~~L~~-~P~~~~~lr~Ei~~~~~~-~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~----~g~~ip~  397 (508)
                      ++|++ ||++|+++|+|++.+++. . +.++++++++||||+|||+|+||++|+++... |.+++|+++    +||.|||
T Consensus       290 ~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~  368 (473)
T 3dan_A          290 KWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKK  368 (473)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECT
T ss_pred             HHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCC
Confidence            99999 799999999999999765 3 57899999999999999999999999999865 558999999    9999999


Q ss_pred             CCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCcc-ccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhce
Q 036686          398 GVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVD-VTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK  476 (508)
Q Consensus       398 G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~  476 (508)
                      |+.|+++.+++||||++|+||++|||+||++...+... ..-.....+++||+|+|.|+|++||.+|+++++++|+++|+
T Consensus       369 G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~  448 (473)
T 3dan_A          369 GEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD  448 (473)
T ss_dssp             TCEEEEEHHHHTTCTTTSSSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEE
T ss_pred             CCEEEechHHhhCCchhcCCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999986221000 00011223455555559999999999999999999999999


Q ss_pred             eecCCCCCCC
Q 036686          477 WLPVPGAPPD  486 (508)
Q Consensus       477 ~~~~~~~~~~  486 (508)
                      +...++...+
T Consensus       449 ~~~~~~~~~~  458 (473)
T 3dan_A          449 SFEIELGESP  458 (473)
T ss_dssp             EEEEEEECCS
T ss_pred             eEEccCCccc
Confidence            7665544333


No 45 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=8e-60  Score=448.35  Aligned_cols=376  Identities=15%  Similarity=0.170  Sum_probs=294.7

Q ss_pred             cCchHHHHHHHHHHhCCeEEEEcCC--eeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC----ceEEeecCccceeeCCCC
Q 036686           53 RRHFIFIVRDLRKKYGPIFTMQMGQ--RTVVIVTSSQLIHEALVQRGPEFASRPPDSP----IRLVFSVGKCAINSAEYG  126 (508)
Q Consensus        53 ~~~~~~~~~~~~~~yG~v~~~~~~~--~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  126 (508)
                      +++.+..+.+++ +||||+++.+++  .+.++|++|+.+++|+.+  ..|.+.+....    .....+....++. ..+|
T Consensus        26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg  101 (411)
T 2dkk_A           26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLA-FADQ  101 (411)
T ss_dssp             SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCST-TCCT
T ss_pred             cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccc-cCCc
Confidence            344556678887 799999999764  789999999999999965  35665432211    1111111022343 3489


Q ss_pred             hhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHH-HHHHhhhhhhhcccccchHHHHH
Q 036686          127 PLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCR-LTICSILICLCFGAKISEERIKH  205 (508)
Q Consensus       127 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fg~~~~~~~~~~  205 (508)
                      +.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+...    +..+|+..++. .+++++++. +||.+.++.  +.
T Consensus       102 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~--~~  173 (411)
T 2dkk_A          102 PDHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAE----GPPADLVERVLEPFPIAVVSE-VMGVPAADR--ER  173 (411)
T ss_dssp             THHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHH----CSCEEHHHHTTTHHHHHHHHH-HHTCCSSHH--HH
T ss_pred             hHHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeehHHHHHHHHHHHHHHH-HhCCCHHHH--HH
Confidence            9999999855 789999999999999999999999999763    45799987775 699999988 599987542  22


Q ss_pred             HHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhh
Q 036686          206 IESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSL  285 (508)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (508)
                      +.....    .....    .+        ..++..++.+.+.+++.+.++++++..             ..   |+++.+
T Consensus       174 ~~~~~~----~~~~~----~~--------~~~~~~~~~~~l~~~~~~~i~~r~~~~-------------~~---dll~~l  221 (411)
T 2dkk_A          174 VHSWTR----QIIST----SG--------GAEAAERAKRGLYGWITETVRARAGSE-------------GG---DVYSML  221 (411)
T ss_dssp             HHHHHG----GGCSS----CS--------CSHHHHHHHHHHHHHHHHHHHTTTTCC-------------SS---CHHHHH
T ss_pred             HHHHHH----HHHhc----cc--------hHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHH
Confidence            322221    11111    11        123445666777778888777665411             11   788888


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHH
Q 036686          286 FGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAV  365 (508)
Q Consensus       286 l~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~  365 (508)
                      ++.  .++..++++++.+++..+++|| |||+++++|++++|++||++|+++++|++                  |++||
T Consensus       222 l~~--~~~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~  280 (411)
T 2dkk_A          222 GAA--VGRGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG------------------ARGTA  280 (411)
T ss_dssp             HHH--HHTTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT------------------CCHHH
T ss_pred             HHh--cCCCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHH
Confidence            876  2233699999999999999999 99999999999999999999999999852                  78999


Q ss_pred             HHhhhcCCCCCCcc-cccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCcc
Q 036686          366 VKETLRRHPPGHFL-LSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKM  444 (508)
Q Consensus       366 i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~  444 (508)
                      |+|+||++|+++.. ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||.              ..+
T Consensus       281 i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~--------------~~~  346 (411)
T 2dkk_A          281 LDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP--------------NPH  346 (411)
T ss_dssp             HHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS--------------CCC
T ss_pred             HHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC--------------CCC
Confidence            99999999999966 789999999999999999999999999999999999999999999984              248


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          445 VPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       445 ~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      +|||+|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++.+.+++|+++||
T Consensus       347 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          347 LAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAE-QVAWRRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG-GCCBCCSSSBCCBSCCEEECCCC
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCcc-ccccccCcccCCcceeEEEeccC
Confidence            9999999999999999999999999999999 899886521 12223345677888999999988


No 46 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.2e-58  Score=440.17  Aligned_cols=374  Identities=17%  Similarity=0.150  Sum_probs=297.7

Q ss_pred             CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHH
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLR  133 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R  133 (508)
                      .+.+..+.++++ ||||+++  +. +.++|++|+.+++++.+. ..|++++... ....   +..++.. .+|+.|+++|
T Consensus        18 ~~p~~~~~~l~~-~Gpv~~~--~~-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~---~~~~l~~-~~g~~h~~~R   87 (398)
T 2xkr_A           18 REARAAYRWMRA-NQPVFRD--RN-GLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP---ALPMMID-MDDPAHLLRR   87 (398)
T ss_dssp             TTHHHHHHHHHH-HCSEEEC--TT-CCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC---CCSSGGG-CCTTHHHHHH
T ss_pred             cChhHHHHHHHh-cCCeeec--CC-CeEEEecHHHHHHHHhCc-ccccCccccC-Cccc---ccccccc-cCchHHHHHH
Confidence            457777889987 9999966  33 789999999999999664 3677765322 1111   1223433 4799999999


Q ss_pred             HHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhh-HHHHHHHHhhhhhhhcccccchHHHHHHHHHHHH
Q 036686          134 RNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVM-SSCRLTICSILICLCFGAKISEERIKHIESILKD  212 (508)
Q Consensus       134 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~  212 (508)
                      +.+ .+.|++..++.+.+.+.+.++.+++.+..     .+.+|+. .+...+++++++.+ ||.+.++.  +.+.+....
T Consensus        88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--~~~~~~~~~  158 (398)
T 2xkr_A           88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCE-----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR--DMFLRWSDD  158 (398)
T ss_dssp             HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTT-----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH--HHHHHHHHH
T ss_pred             HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhh-----cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH--HHHHHHHHH
Confidence            965 78999999999999999999999998864     3378998 55568999999998 99987542  344444444


Q ss_pred             HHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCC
Q 036686          213 VMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTG  292 (508)
Q Consensus       213 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~  292 (508)
                      +......   .++|       ...++..++.+.+.+++.+.++++++..             ..   |+++.+++...+ 
T Consensus       159 ~~~~~~~---~~~p-------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~~ll~~~~~-  211 (398)
T 2xkr_A          159 LVTFLSS---HVSQ-------EDFQITMDAFAAYNDFTRATIAARRADP-------------TD---DLVSVLVSSEVD-  211 (398)
T ss_dssp             HHHHHTS---CCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHHCCBT-
T ss_pred             HHhccCc---ccch-------hhHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHHhhcc-
Confidence            4433211   1122       2234556677788888888888776511             11   899999877542 


Q ss_pred             CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcC
Q 036686          293 REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRR  372 (508)
Q Consensus       293 ~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl  372 (508)
                      +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|+||+
T Consensus       212 ~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl  273 (398)
T 2xkr_A          212 GERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLRW  273 (398)
T ss_dssp             TBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhh
Confidence            33699999999999999999999999999999999999999999999964                  799999999999


Q ss_pred             CCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCC
Q 036686          373 HPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRR  452 (508)
Q Consensus       373 ~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r  452 (508)
                      +|+++. ++|.+++|++++||.||||+.|+++.+++||||++|+||++|+|+||.              ..++|||+|+|
T Consensus       274 ~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--------------~~~l~FG~G~r  338 (398)
T 2xkr_A          274 TAPVKN-MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNP--------------NSHLAFGFGTH  338 (398)
T ss_dssp             HCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSS--------------CCCCTTCCSTT
T ss_pred             cccccC-cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCC--------------CCCCcCCCCCc
Confidence            999997 789999999999999999999999999999999999999999999973              13899999999


Q ss_pred             CCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCC-cccceeeeecCceeEEeecC
Q 036686          453 ICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPT-ETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       453 ~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r  508 (508)
                      .|+|++||++|++++++.|+++| +++++++.  ++. ...+.+++.+.+++|+++||
T Consensus       339 ~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~lpv~~~p~  394 (398)
T 2xkr_A          339 FCLGNQLARLELSLMTERVLRRLPDLRLVADD--SVLPLRPANFVSGLESMPVVFTPS  394 (398)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHSTTCEESCTT--CCCCBCCCSSBCCBSCCEEECCCC
T ss_pred             CCcCHHHHHHHHHHHHHHHHHhCCCceECCCc--ceecccCcccccCccceeEEecCC
Confidence            99999999999999999999999 59987532  221 13345566778899999876


No 47 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=7e-59  Score=442.75  Aligned_cols=374  Identities=16%  Similarity=0.154  Sum_probs=292.3

Q ss_pred             chHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCCC-CCceEEee-cCccceeeCCCChhHHH
Q 036686           55 HFIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPPD-SPIRLVFS-VGKCAINSAEYGPLWRS  131 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~w~~  131 (508)
                      +.+..+.++ ++||||+++++ ++.+.++|+||+.+++++.++  .|.+++.. ..+..+.. .+..++.. .+|+.|++
T Consensus        38 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~-~dg~~h~~  113 (417)
T 2y5n_A           38 TLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLS-MDPPEHSR  113 (417)
T ss_dssp             CCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGG-CCTTHHHH
T ss_pred             CchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCcc-CCchHHHH
Confidence            445568888 79999999997 789999999999999999664  46554322 11110000 01223433 47999999


Q ss_pred             HHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHHHHH
Q 036686          132 LRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIESIL  210 (508)
Q Consensus       132 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~~~~  210 (508)
                      +|+.+ .+.|++..++.+.+.+.+.++.+++.+...    +..+|+...+ ..+++++++. +||.+.++  .+.+....
T Consensus       114 ~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~  185 (417)
T 2y5n_A          114 LRRLV-VKAFTARRAESLRPRAREIAHELVDQMAAT----GQPADLVAMFARQLPVRVICE-LLGVPSAD--HDRFTRWS  185 (417)
T ss_dssp             HHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHHH----CSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHHHHH
T ss_pred             HHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhC----CCCeeHHHHHHHHhHHHHHHH-HcCCCHHH--HHHHHHHH
Confidence            99955 779999999999999999999999999741    2278998766 4688999987 69988753  22333322


Q ss_pred             HHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCC
Q 036686          211 KDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEP  290 (508)
Q Consensus       211 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  290 (508)
                      ..+.    ... . .|         .++..++.+.+.+++.+.++++++..             ..   |+++.+++...
T Consensus       186 ~~~~----~~~-~-~~---------~~~~~~~~~~l~~~~~~~i~~r~~~~-------------~~---dll~~ll~~~~  234 (417)
T 2y5n_A          186 GAFL----STA-E-VT---------AEEMQEAAEQAYAYMGDLIDRRRKEP-------------TD---DLVSALVQARD  234 (417)
T ss_dssp             HTTS----TTC-C-CC---------HHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHHCCB
T ss_pred             HHHh----ccc-C-CC---------HHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHhhhc
Confidence            2211    110 0 11         13455666778888888888776521             11   89999987653


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhh
Q 036686          291 TGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETL  370 (508)
Q Consensus       291 ~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~l  370 (508)
                       ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  .|++|||+|+|
T Consensus       235 -~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~l  295 (417)
T 2y5n_A          235 -QQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRP------------------ELIPSAVEELT  295 (417)
T ss_dssp             -TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHH
T ss_pred             -cCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHH
Confidence             23369999999999999999999999999999999999999999999984                  27999999999


Q ss_pred             cCCCCCC-cccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCC
Q 036686          371 RRHPPGH-FLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGA  449 (508)
Q Consensus       371 Rl~p~~~-~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~  449 (508)
                      |++|+++ ..++|.+++|++++||.|||||.|+++.+++||||++|+||++|+||||.              ..++|||+
T Consensus       296 Rl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--------------~~~lpFG~  361 (417)
T 2y5n_A          296 RWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP--------------NQHLGFGH  361 (417)
T ss_dssp             HHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS--------------CCCCTTCC
T ss_pred             HhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC--------------CCcCCCCC
Confidence            9999999 55789999999999999999999999999999999999999999999972              35899999


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEe
Q 036686          450 GRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVI  505 (508)
Q Consensus       450 G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  505 (508)
                      |+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++....++|++
T Consensus       362 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          362 GVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET-QLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             STTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCCCSSBCCBSCCEEEC
T ss_pred             CCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCc-cceeccCcccCCcceeEEeC
Confidence            99999999999999999999999999 588876421 22233455667778888864


No 48 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=1.1e-58  Score=444.34  Aligned_cols=394  Identities=16%  Similarity=0.135  Sum_probs=299.3

Q ss_pred             CCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEE--------cCCeeEEEeCCHHHHHHHHHhcCCCcCC
Q 036686           31 KNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQ--------MGQRTVVIVTSSQLIHEALVQRGPEFAS  102 (508)
Q Consensus        31 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~--------~~~~~~vvv~~p~~~~~il~~~~~~~~~  102 (508)
                      ...||+|.++++++....   ...+.+..+.++ ++||||+++.        +|+.++++|++++.+++++.+. ..|+.
T Consensus        17 ~~~p~~~~~~~~~~~~~~---~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~   91 (433)
T 3ivy_A           17 VPSPNLPPGFDFTDPAIY---AERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSS   91 (433)
T ss_dssp             ---CCCCTTCCTTCHHHH---TTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEES
T ss_pred             cCCCCCCCCCCCCCHHHh---hcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccC
Confidence            345677777777664332   123466778888 7899999998        4557999999999999999554 56776


Q ss_pred             CCCCCCceE-------EeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccc
Q 036686          103 RPPDSPIRL-------VFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFV  175 (508)
Q Consensus       103 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  175 (508)
                      ++.......       ....+..++. ..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+..     ++.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~  164 (433)
T 3ivy_A           92 YENGVIPRFKNDIAREDIEVQRFVML-NMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAA-----AGSG  164 (433)
T ss_dssp             TTTCSCCCCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHH-----HCEE
T ss_pred             CcccccccccccccccccccccCCcc-ccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh-----CCCe
Confidence            654322110       0111122343 34799999999965 78999999999999999999999999974     4468


Q ss_pred             hhhHHH-HHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHH
Q 036686          176 EVMSSC-RLTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLI  254 (508)
Q Consensus       176 dl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i  254 (508)
                      |+..++ ..+++++++.+ ||.+.  +..+.+.+....       .+....|.+..      .+..++.+.+.+++.+.+
T Consensus       165 d~~~~~~~~~~~~vi~~l-~G~~~--~~~~~~~~~~~~-------~~~~~~p~~~~------~~~~~~~~~~~~~~~~~i  228 (433)
T 3ivy_A          165 DFVEQVSCELPLQAIAGL-LGVPQ--EDRGKLFHWSNE-------MTGNEDPEYAH------IDPKASSAELIGYAMKMA  228 (433)
T ss_dssp             EHHHHTTSHHHHHHHHHH-HTCCH--HHHHHHHHHHTT-------CSCCCCGGGTT------CCHHHHHHHHHHHHHHHH
T ss_pred             eHHHHHHHHHHHHHHHHH-cCCCH--HHHHHHHHHHHH-------HhccCCchhhh------HHHHHHHHHHHHHHHHHH
Confidence            998887 99999999996 99653  222222222211       11112232211      134455667778888888


Q ss_pred             HHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHH
Q 036686          255 RNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQ  334 (508)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~  334 (508)
                      +++++..             ..   |+++.+++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus       229 ~~r~~~~-------------~~---dll~~ll~~~~~-~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~  291 (433)
T 3ivy_A          229 EEKAKNP-------------AD---DIVTQLIQADID-GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQW  291 (433)
T ss_dssp             HHC-----------------------CHHHHHSCC---CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHH
T ss_pred             HHHhcCC-------------CC---cHHHHHHhhhcC-CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHH
Confidence            7766522             11   899999986543 337999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCC
Q 036686          335 EKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDM  414 (508)
Q Consensus       335 ~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~  414 (508)
                      +++++|++                    +|||+|+||++|+++. ++|.+++|++++||.||||+.|+++.+++||||++
T Consensus       292 ~~l~~E~~--------------------~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~  350 (433)
T 3ivy_A          292 ELYKKVRP--------------------ETAADEIVRWATPVTA-FQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEV  350 (433)
T ss_dssp             HHHHHHCC--------------------TTHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTT
T ss_pred             HHHHhCcc--------------------cchhHHHhhhCcchhc-eeeEECCCEEECCEEECCCCEEEEChhhhcCCchh
Confidence            99999964                    6899999999999987 68999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccCCCCCCccccCCCCCccccCC-CCCCCCCChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccc
Q 036686          415 WSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFG-AGRRICPAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYA  492 (508)
Q Consensus       415 ~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~  492 (508)
                      |+||++|||+||.              ..++||| +|+|.|+|++||++|++++++.|+++|+ ++++++..    ...+
T Consensus       351 f~dp~~F~p~R~~--------------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~----~~~~  412 (433)
T 3ivy_A          351 FQDPFTFNILRNP--------------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPE----RLRS  412 (433)
T ss_dssp             SSSTTSCCTTCCS--------------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCE----ECCC
T ss_pred             CCCcCccCCCCCC--------------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCc----eecc
Confidence            9999999999982              3589999 9999999999999999999999999999 99875421    1223


Q ss_pred             eeeeecCceeEEeecC
Q 036686          493 FTVVMKNSLKAVILPR  508 (508)
Q Consensus       493 ~~~~~~~~~~v~~~~r  508 (508)
                      ..+.....++|++++|
T Consensus       413 ~~~~g~~~lpv~~~~R  428 (433)
T 3ivy_A          413 GWLNGIKHWQVDYTGR  428 (433)
T ss_dssp             SSBCCEEECEEESCC-
T ss_pred             CcccCcceeEEEEecc
Confidence            3455556899999887


No 49 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=3.4e-59  Score=446.47  Aligned_cols=378  Identities=16%  Similarity=0.136  Sum_probs=291.1

Q ss_pred             chHHHHHHHHHHhCCeEEEEcC--CeeEEEeCCHHHHHHHHHhcCCCcCCCCCC--------CCceEE----e-ecCccc
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMG--QRTVVIVTSSQLIHEALVQRGPEFASRPPD--------SPIRLV----F-SVGKCA  119 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~--~~~~vvv~~p~~~~~il~~~~~~~~~~~~~--------~~~~~~----~-~~~~~~  119 (508)
                      +.+..+.+++ +||||+++++|  +.+.++|+||+.+++++.++  .|++++..        ......    + ..++.+
T Consensus        21 ~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (425)
T 2z3t_A           21 DPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVENW   97 (425)
T ss_dssp             CCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTTC
T ss_pred             ChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccccc
Confidence            3455678876 59999999987  78899999999999999764  67776531        000000    0 111123


Q ss_pred             eeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHH-HHHHHHhhhhhhhccccc
Q 036686          120 INSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS-CRLTICSILICLCFGAKI  198 (508)
Q Consensus       120 ~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fg~~~  198 (508)
                      +.+. +|+.|+++||.+ .+.|++..++.+.+.+.+.++.+++.+..     .+.+|+... ...+++++++.+ ||.+.
T Consensus        98 l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~g~~dl~~~~~~~~~~~vi~~~-~G~~~  169 (425)
T 2z3t_A           98 LVFL-DPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRA-----QRRPDLVEGFAAPLPILVISAL-LGIPE  169 (425)
T ss_dssp             GGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTT-----SSSCBHHHHTTTHHHHHHHHHH-HTCCG
T ss_pred             cccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHH-hCCCH
Confidence            4443 799999999965 78999999999999999999999999964     237898875 478999999998 99887


Q ss_pred             chHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccc
Q 036686          199 SEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIG  278 (508)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  278 (508)
                      ++.  +.+.+....+....     ..+| +   .....++..++.+.+.+++.+.++++++..             ..  
T Consensus       170 ~~~--~~~~~~~~~~~~~~-----~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~--  223 (425)
T 2z3t_A          170 EDH--TWLRANAVALQEAS-----TTRA-R---DGRGYARAEAASQEFTRYFRREVDRRGGDD-------------RD--  223 (425)
T ss_dssp             GGH--HHHHHHHHHHHTTC-----TTCC-C------HHHHHHHHHHHHHHHHHHHHCC----------------------
T ss_pred             HHH--HHHHHHHHHHHhhc-----cccC-C---CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC--
Confidence            532  34444444333211     1112 1   112234556667777888887777665421             11  


Q ss_pred             hhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccC
Q 036686          279 AAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEK  358 (508)
Q Consensus       279 ~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~  358 (508)
                       |+++.+++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                
T Consensus       224 -dll~~ll~~~~~-~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------  285 (425)
T 2z3t_A          224 -DLLTLLVRARDT-GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE----------------  285 (425)
T ss_dssp             -CHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------
T ss_pred             -CHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH----------------
Confidence             788888875432 23699999999999999999999999999999999999999999999852                


Q ss_pred             CchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccC
Q 036686          359 MPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTG  438 (508)
Q Consensus       359 l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~  438 (508)
                        |++|||+|+||++|+++ .++|.+++|++++||.||||+.|+++.+++||||++|+||++|+|+||.           
T Consensus       286 --~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-----------  351 (425)
T 2z3t_A          286 --STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA-----------  351 (425)
T ss_dssp             --GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS-----------
T ss_pred             --hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC-----------
Confidence              89999999999999999 5789999999999999999999999999999999999999999999994           


Q ss_pred             CCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          439 TRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       439 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                         ..++|||+|+|.|+|++||++|++++++.|+++| +++ +++...  ......+++++.+++|++++
T Consensus       352 ---~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~--~~~~~~~~~~~~~lpv~~~~  415 (425)
T 2z3t_A          352 ---ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEV--EYADDMVFHGPTRLLLDLPD  415 (425)
T ss_dssp             ---SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEE--EECSCSSBCCEEEEEECCC-
T ss_pred             ---CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCcc--ccccccccCCcceeeEEecc
Confidence               2489999999999999999999999999999999 898 653211  22334566778889998876


No 50 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=1.6e-59  Score=450.59  Aligned_cols=382  Identities=14%  Similarity=0.134  Sum_probs=287.4

Q ss_pred             HHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhH
Q 036686           58 FIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFV  137 (508)
Q Consensus        58 ~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~  137 (508)
                      ..+.++ ++||||+++..++  .++|++|+.++++|.+.. .|++++........++  ...+. ..+|+.|+++|+.+ 
T Consensus        57 ~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~--~~~l~-~~dg~~h~~~Rr~~-  128 (441)
T 3nc3_A           57 AYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVMR--GPVLA-QMHGKEHSAKRRIV-  128 (441)
T ss_dssp             GTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSCC----------------CCHHHH-
T ss_pred             HHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccccC--CCccc-cCCcHHHHHHHHHH-
Confidence            335565 5899999987665  899999999999997764 4776654433222222  21233 34799999999965 


Q ss_pred             hhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhH-HHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHh
Q 036686          138 TELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMS-SCRLTICSILICLCFGAKISEERIKHIESILKDVMLI  216 (508)
Q Consensus       138 ~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~-~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~  216 (508)
                      .+.|++..++.+.+.+.+.++.+++.+..     ++.+|+.. ....+++++++. +||.+.++  .+.+......+...
T Consensus       129 ~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~~~~~~~~~~~~  200 (441)
T 3nc3_A          129 VRSFIGDALDHLSPLIKQNAENLLAPYLE-----RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD--HEKISEWHSGVADF  200 (441)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTTTTT-----TTEEECCCCCHHHHHHHHHHH-HTTCCGGG--HHHHHHHHHHHHHH
T ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHHHh
Confidence            78999999999999999999999988864     45688754 445688899888 58987643  24455555544443


Q ss_pred             cCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCC
Q 036686          217 TSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQL  296 (508)
Q Consensus       217 ~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l  296 (508)
                      .....   .+      ........+..+.+.+++.+.++++++..             ..   |+++.+++... ++..+
T Consensus       201 ~~~~~---~~------~~~~~~~~~~~~~l~~~~~~~i~~rr~~~-------------~~---Dll~~Ll~~~~-~~~~l  254 (441)
T 3nc3_A          201 ITSIS---QS------PEARAHSLWCSEQLSQYLMPVIKERRVNP-------------GS---DLISILCTSEY-EGMAL  254 (441)
T ss_dssp             HHCSC---CC------HHHHHHHHHHHHHHHHHHHHHHHHHTTSC-------------CS---SHHHHHCC-------CC
T ss_pred             ccccc---CC------hHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHHhhc-cCCCC
Confidence            22100   01      11133455666778888888888765421             11   89999987654 23379


Q ss_pred             CHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCC
Q 036686          297 GEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPG  376 (508)
Q Consensus       297 ~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~  376 (508)
                      +++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  +|+++||+|+||++|++
T Consensus       255 s~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~  316 (441)
T 3nc3_A          255 SDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------SLVPRAIAETLRYKPPV  316 (441)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSB
T ss_pred             CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHhhhcCCcc
Confidence            999999999999999999999999999999999999999999874                  68999999999999999


Q ss_pred             CcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCC
Q 036686          377 HFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPA  456 (508)
Q Consensus       377 ~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G  456 (508)
                      +. ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||+.+....    ......|+|||+|+|.|+|
T Consensus       317 ~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~----~~~~~~~l~FG~G~r~C~G  391 (441)
T 3nc3_A          317 QL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSA----FSGAARHLAFGSGIHNCVG  391 (441)
T ss_dssp             CE-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGT----TSSSCSSCTTCCGGGCCTT
T ss_pred             cC-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccc----cCCCCCcccCCCCCccCCC
Confidence            98 789999999999999999999999999999999999999999999997653311    1125689999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          457 WSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       457 ~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                      ++||++|++++++.|+++| +++++++..   ....+.+++.+..++|+++|
T Consensus       392 ~~lA~~e~~~~l~~ll~~f~~~~l~~~~~---~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          392 TAFAKNEIEIVANIVLDKMRNIRLEEDFC---YAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEECTTCC---CCEECSSBCEESCCEEECC-
T ss_pred             HHHHHHHHHHHHHHHHHhCcccEECCCCc---ccccCccccCcceeEEEEec
Confidence            9999999999999999999 999986532   23445677788899999875


No 51 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.8e-59  Score=445.39  Aligned_cols=377  Identities=17%  Similarity=0.179  Sum_probs=297.1

Q ss_pred             chHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCC-CCC-----ce---EEee-cC-ccceee
Q 036686           55 HFIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPP-DSP-----IR---LVFS-VG-KCAINS  122 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~-~~~-----~~---~~~~-~~-~~~~~~  122 (508)
                      +.+..+.++ ++||||+++++ ++.+.++|+||+.++++|.++.  +++.+. ...     ..   .+++ .. ..++. 
T Consensus        18 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-   93 (411)
T 1gwi_A           18 DLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSML-   93 (411)
T ss_dssp             CHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGG-
T ss_pred             ChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccccc-
Confidence            566678888 89999999997 8899999999999999996642  333320 000     00   0000 01 12333 


Q ss_pred             CCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHH-HHHHhhhhhhhcccccchH
Q 036686          123 AEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCR-LTICSILICLCFGAKISEE  201 (508)
Q Consensus       123 ~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fg~~~~~~  201 (508)
                      ..+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+..   . ++++|+..++. .+++++++. +||.+.++ 
T Consensus        94 ~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-  166 (411)
T 1gwi_A           94 TVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPA---D-GGVVDLKAAFAYPLPMYVVAD-LMGIEEAR-  166 (411)
T ss_dssp             GCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCC---S-CCCEEHHHHTTTHHHHHHHHH-HHTCCGGG-
T ss_pred             cCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHH---c-CCCcchHHHHhhHHHHHHHHH-HhCCCHHH-
Confidence            34799999999955 78999999999999999999999998863   1 56899988776 589999996 69988643 


Q ss_pred             HHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhh
Q 036686          202 RIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAY  281 (508)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (508)
                       .+.+......++...       .+         .++..++.+.+.+++.+.++++++..             ..   |+
T Consensus       167 -~~~~~~~~~~~~~~~-------~~---------~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---d~  213 (411)
T 1gwi_A          167 -LPRLKVLFEKFFSTQ-------TP---------PEEVVATLTELASIMTDTVAAKRAAP-------------GD---DL  213 (411)
T ss_dssp             -HHHHHHHHHHHHCTT-------SC---------HHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SH
T ss_pred             -HHHHHHHHHHHhccC-------CC---------hHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CH
Confidence             234444444332210       11         13445666778888888888776521             11   89


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCch
Q 036686          282 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPY  361 (508)
Q Consensus       282 ~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~  361 (508)
                      ++.+++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  ++
T Consensus       214 l~~ll~~~~~-~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~  274 (411)
T 1gwi_A          214 TSALIQASEN-GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------AE  274 (411)
T ss_dssp             HHHHHHCCBT-TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS------------------SC
T ss_pred             HHHHHHhccc-CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh------------------HH
Confidence            9999876532 3369999999999999999999999999999999999999999999862                  36


Q ss_pred             HHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCC-CCCCCCCCCcccCCCCCCccccCCC
Q 036686          362 LDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW-SDPGEFRPERFLEGDGVDVDVTGTR  440 (508)
Q Consensus       362 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~  440 (508)
                      ++|||+|+||++|+++..++|.+++|++++|+.||||+.|+++.+++||||++| +||++|+||||.+            
T Consensus       275 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~------------  342 (411)
T 1gwi_A          275 WSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG------------  342 (411)
T ss_dssp             HHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS------------
T ss_pred             HHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC------------
Confidence            999999999999999876789999999999999999999999999999999999 9999999999942            


Q ss_pred             CCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          441 GVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       441 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                       ..++|||+|+|.|+|++||++|++++++.|+++| +++++.+.. +.....+.+++++.+++|++++|
T Consensus       343 -~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~lpv~~~~r  409 (411)
T 1gwi_A          343 -NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAA-ELRNKPVVTQNDLFELPVRLAHH  409 (411)
T ss_dssp             -SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCSCTTBCCBSCCEEESSCC
T ss_pred             -CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcc-cccccccccccCcceeEEEecCC
Confidence             3589999999999999999999999999999999 798875321 22223345667889999999987


No 52 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=3.5e-59  Score=443.55  Aligned_cols=375  Identities=16%  Similarity=0.116  Sum_probs=293.6

Q ss_pred             chHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc------eEEeecCccceeeCCCChh
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI------RLVFSVGKCAINSAEYGPL  128 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  128 (508)
                      +.+..+.++ ++||||++ +  |.+.++|++|+.++++|.+  ..|.+++....+      ....+....++.. .+|+.
T Consensus        14 ~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~   86 (397)
T 3buj_A           14 DPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILF-QDEPD   86 (397)
T ss_dssp             CCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGG-CCTTH
T ss_pred             CchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCccccccccccccccccccccccccc-CCchh
Confidence            345556666 58999998 6  5889999999999999965  356543211000      0001110223433 37999


Q ss_pred             HHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhH-HHHHHHHhhhhhhhcccccchHHHHHHH
Q 036686          129 WRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMS-SCRLTICSILICLCFGAKISEERIKHIE  207 (508)
Q Consensus       129 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~-~~~~~~~~~~~~~~fg~~~~~~~~~~~~  207 (508)
                      |+++|+.+ .+.|++..++.+.+.+.++++.+++.+..     ++.+|+.. ....+++++++.+ ||.+.++.  +.+.
T Consensus        87 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~--~~~~  157 (397)
T 3buj_A           87 HGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALA-----RGAMDVVDELAYPLALRAVLGL-LGLPAADW--GAVG  157 (397)
T ss_dssp             HHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHT-----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH--HHHH
T ss_pred             HHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhh-----cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH--HHHH
Confidence            99999965 67999999999999999999999999974     44789875 4578999999998 99987542  3444


Q ss_pred             HHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhc
Q 036686          208 SILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFG  287 (508)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  287 (508)
                      .....+......    .++      ....++..++.+.+.+++.+.++++++..             ..   |+++.+++
T Consensus       158 ~~~~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~~ll~  211 (397)
T 3buj_A          158 RWSRDVGRTLDR----GAS------AEDMRRGHAAIAEFADYVERALARRRREG-------------GE---DLLALMLD  211 (397)
T ss_dssp             HHHHHHHGGGCS----SCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CC---SHHHHHHH
T ss_pred             HHHHHHHhhcCC----CCC------hHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------------CC---CHHHHHHH
Confidence            444443332211    011      12234556677788888888888877631             11   78888887


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHH
Q 036686          288 LEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVK  367 (508)
Q Consensus       288 ~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~  367 (508)
                      ...+ + .++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  .|++|||+
T Consensus       212 ~~~~-~-~ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~  271 (397)
T 3buj_A          212 AHDR-G-LMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP------------------DLLAQAVE  271 (397)
T ss_dssp             HHHT-T-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG------------------GGHHHHHH
T ss_pred             hhhc-C-CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH------------------HHHHHHHH
Confidence            5422 2 29999999999999999999999999999999999999999999984                  28999999


Q ss_pred             hhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccC
Q 036686          368 ETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPF  447 (508)
Q Consensus       368 E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~F  447 (508)
                      |+||++|+++ .++|.+++|++++||.||||+.|+++.+++||||++|+||++|+|+||.              ..++||
T Consensus       272 E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~--------------~~~~~F  336 (397)
T 3buj_A          272 ECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP--------------VPSMSF  336 (397)
T ss_dssp             HHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC--------------CCCSTT
T ss_pred             HHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC--------------CCCCCC
Confidence            9999999999 5789999999999999999999999999999999999999999999994              248999


Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          448 GAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       448 g~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |+|+|.|+|++||++|++++++.| ++| +++++++.. +.....+.+++++.+++|+++||
T Consensus       337 G~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          337 GAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCASD-ALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             CCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCST-TCCBCSCSSCCCBSCCEEECCTT
T ss_pred             CCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCCc-ccccccccccCCCcceeEEecCC
Confidence            999999999999999999999999 999 899987521 22223455677889999999997


No 53 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=1.9e-59  Score=448.07  Aligned_cols=380  Identities=16%  Similarity=0.154  Sum_probs=298.7

Q ss_pred             chHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCC---C-CC-c-e-EEeecC-ccceeeCCCC
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPP---D-SP-I-R-LVFSVG-KCAINSAEYG  126 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~---~-~~-~-~-~~~~~~-~~~~~~~~~~  126 (508)
                      +.+..+.++ ++||||++ + ++.+.++|++|+.++++|.++.  |++++.   . .. . . ..++.. ..++.. .+|
T Consensus        27 ~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g  100 (419)
T 1q5d_A           27 DPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFG-LPP  100 (419)
T ss_dssp             CCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTT-SCH
T ss_pred             ChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhccccccc-CCc
Confidence            566778888 68999999 6 7788999999999999997653  776651   0 00 0 0 011100 123333 479


Q ss_pred             hhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHH-HHHHHHhhhhhhhcccccchHHHHH
Q 036686          127 PLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS-CRLTICSILICLCFGAKISEERIKH  205 (508)
Q Consensus       127 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fg~~~~~~~~~~  205 (508)
                      +.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+..     .+.+|+... ...+++++++.+ ||.+.++.  +.
T Consensus       101 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--~~  171 (419)
T 1q5d_A          101 EDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSG-----QEEFDVVRDYAEGIPMRAISAL-LKVPAECD--EK  171 (419)
T ss_dssp             HHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTT-----SSCEETTTTTGGGSHHHHHHHH-TTCCGGGH--HH
T ss_pred             hHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHH--HH
Confidence            9999999955 78999999999999999999999999864     237898764 488999999998 99987542  34


Q ss_pred             HHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhh
Q 036686          206 IESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSL  285 (508)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (508)
                      +.+....+......   ..+|+..    ...++..+..+.+.+++.+.++++++..        .    +.   |+++.+
T Consensus       172 ~~~~~~~~~~~~~~---~~~P~~~----~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~----~~---dll~~l  229 (419)
T 1q5d_A          172 FRRFGSATARALGV---GLVPRVD----EETKTLVASVTEGLALLHGVLDERRRNP--------L----EN---DVLTML  229 (419)
T ss_dssp             HHHHHHHHHHHTTT---TTSSCCC----SCHHHHHHHHHHHHHHHHHHHHHHHHSC--------C----SS---CHHHHH
T ss_pred             HHHHHHHHHHhccc---ccccCCh----HHHHHHHHHHHHHHHHHHHHHHHHHhCC--------C----CC---CHHHHH
Confidence            44444444443221   2233321    1234556677788888888888776521        0    11   577777


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHH
Q 036686          286 FGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAV  365 (508)
Q Consensus       286 l~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~  365 (508)
                      ++... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  .|++||
T Consensus       230 l~~~~-~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~  290 (419)
T 1q5d_A          230 LQAEA-DGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------------GLMRNA  290 (419)
T ss_dssp             HHHHH-SSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHH
T ss_pred             Hhhhc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHH
Confidence            76532 22369999999999999999999999999999999999999999999983                  389999


Q ss_pred             HHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccc
Q 036686          366 VKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMV  445 (508)
Q Consensus       366 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~  445 (508)
                      |+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||  .            ..++
T Consensus       291 i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~------------~~~l  356 (419)
T 1q5d_A          291 LDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD--T------------SASL  356 (419)
T ss_dssp             HHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC--C------------TTCC
T ss_pred             HHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC--C------------CCCC
Confidence            9999999999996688999999999999999999999999999999999999999999994  1            3589


Q ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          446 PFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       446 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |||+|+|.|+|++||++|++++++.|+++| +++++++.  ++  ..+.+++++.+++|+++||
T Consensus       357 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~l~v~~~~r  416 (419)
T 1q5d_A          357 AYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP--VF--GYHPAFRNIESLNVILKPS  416 (419)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EE--CCCSSBCCEEECEEESSCC
T ss_pred             CCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc--cc--ccccccCCCceeEEEEecC
Confidence            999999999999999999999999999999 79988741  22  2355677788999999987


No 54 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=2.2e-58  Score=441.30  Aligned_cols=377  Identities=16%  Similarity=0.144  Sum_probs=295.9

Q ss_pred             CchHHHHHHHHHHhC-CeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHH
Q 036686           54 RHFIFIVRDLRKKYG-PIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSL  132 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~  132 (508)
                      .+.+..+.++++++| ||+++..++ +.++|+||+.+++++. +...|++++..... .....+..++ ...+|+.|+++
T Consensus        38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~-~~~~~~~~~~-~~~dg~~h~~~  113 (421)
T 3lxh_A           38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPR-EAGEAYDMVP-TKLDPPEHTPY  113 (421)
T ss_dssp             GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSH-HHHHHCCCTT-TTCCTTTHHHH
T ss_pred             cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCc-ccccccccCC-ccCCcHHHHHH
Confidence            467778888887765 899998766 4889999999999994 44578776532211 1111111122 33479999999


Q ss_pred             HHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHHHHHH
Q 036686          133 RRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIESILK  211 (508)
Q Consensus       133 R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~  211 (508)
                      |+.+ .+.|++..++.+.+.+.+.++.+++.+..     ++.+|+...+ ..++.++++. +||.+.++  .+.+.+...
T Consensus       114 R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--~~~~~~~~~  184 (421)
T 3lxh_A          114 RKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFAD-----RGHCEFGSEFSTVFPVRVFLA-LAGLPVED--ATKLGLLAN  184 (421)
T ss_dssp             HHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTT-----TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHHHHHH
T ss_pred             HHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhh-----cCCeehHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHH
Confidence            9955 78999999999999999999999998864     4467876555 4566666665 58977543  345555554


Q ss_pred             HHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCC
Q 036686          212 DVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPT  291 (508)
Q Consensus       212 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  291 (508)
                      .+....     .++|      ....++..++.+.+.+++.+.++++++..             ..   |+++.+++...+
T Consensus       185 ~~~~~~-----~~~p------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~~ll~~~~~  237 (421)
T 3lxh_A          185 EMTRPS-----GNTP------EEQGRSLEAANKGFFEYVAPIIAARRGGS-------------GT---DLITRILNVEID  237 (421)
T ss_dssp             HHHSCC-----CSSH------HHHHHHHHHHHHHHHHHHHHHHHHHTTCC-------------CC---SHHHHHHTSCBT
T ss_pred             HHhccc-----cCCC------chhHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHhhhcc
Confidence            443211     1122      12245666777888888888888776521             11   899999987543


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhc
Q 036686          292 GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLR  371 (508)
Q Consensus       292 ~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR  371 (508)
                       +..++++++.++++.+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|+||
T Consensus       238 -~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR  298 (421)
T 3lxh_A          238 -GKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEELFR  298 (421)
T ss_dssp             -TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHH
Confidence             33799999999999999999999999999999999999999999999976                  78999999999


Q ss_pred             CCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCC
Q 036686          372 RHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGR  451 (508)
Q Consensus       372 l~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~  451 (508)
                      ++|++  .++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||              ...|+|||+|+
T Consensus       299 l~p~~--~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~--------------~~~~l~FG~G~  362 (421)
T 3lxh_A          299 RFAVV--SDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR--------------DVTHSTFAQGP  362 (421)
T ss_dssp             HCCCB--EEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS--------------CCCCCTTCCGG
T ss_pred             hcCcc--CCceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC--------------CCCCCCCCCcC
Confidence            99999  478999999999999999999999999999999999999999999994              35699999999


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          452 RICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       452 r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |.|+|++||++|++++++.|+++| +++++++.....  .. .+++....++|+++||
T Consensus       363 r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~~~~--~~-~~~~~~~~lpv~~~p~  417 (421)
T 3lxh_A          363 HRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIY--HS-GIVAAVENIPLEWEPQ  417 (421)
T ss_dssp             GSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCEE--EC-SSBCEEECCEEECCCC
T ss_pred             ccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCCCcee--cc-ccccCceeeeEEEecc
Confidence            999999999999999999999999 999987654322  22 2445556799999986


No 55 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=2.8e-59  Score=445.65  Aligned_cols=373  Identities=15%  Similarity=0.145  Sum_probs=290.8

Q ss_pred             chHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceE---Eee----cCccceeeCCCC
Q 036686           55 HFIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRL---VFS----VGKCAINSAEYG  126 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~  126 (508)
                      +.+..+.+| ++||+|+++++ ++.+.++|+||+.++++|.++  .|.+.+....+..   ...    .+. ++.+ .+|
T Consensus        25 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~-~~g   99 (408)
T 3abb_A           25 QPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAF-PLIG-VDD   99 (408)
T ss_dssp             SCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CC-TTTT-CCT
T ss_pred             CchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCcccccccc-cccc-CCc
Confidence            345568888 89999999998 889999999999999999654  3444332111110   111    111 3333 489


Q ss_pred             hhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHH-HHHHhhhhhhhcccccchHHHHH
Q 036686          127 PLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCR-LTICSILICLCFGAKISEERIKH  205 (508)
Q Consensus       127 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fg~~~~~~~~~~  205 (508)
                      +.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+...    ++.+|+...+. .+++++++. +||.+.++  .+.
T Consensus       100 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~  171 (408)
T 3abb_A          100 PVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLAK----GPGADLVSAFALPVPSVAICE-LLGVPYGD--HDF  171 (408)
T ss_dssp             THHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHT----CSCEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHH
T ss_pred             hHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeehHHHHHHHHHHHHHHH-HhCCCHHH--HHH
Confidence            9999999955 779999999999999999999999999742    56799988776 488899887 69988643  233


Q ss_pred             HHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhh
Q 036686          206 IESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSL  285 (508)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (508)
                      +......++...       .+          ++..++.+.+.+++.+.++++++..             ..   |+++.+
T Consensus       172 ~~~~~~~~~~~~-------~~----------~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---d~l~~l  218 (408)
T 3abb_A          172 FEECSRNFVGAA-------TS----------AEADAAFGELYTYLHGLVGRKQAEP-------------ED---GLLDEL  218 (408)
T ss_dssp             HHHHHHHHC-----------------------CCSSHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHH
T ss_pred             HHHHHHHHhccc-------ch----------HHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHH
Confidence            333333322100       00          2223445566777788887766521             11   788888


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHH
Q 036686          286 FGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAV  365 (508)
Q Consensus       286 l~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~  365 (508)
                      ++...+ ++.++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++||
T Consensus       219 l~~~~~-~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~  279 (408)
T 3abb_A          219 IARQLE-EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------------------AVSGV  279 (408)
T ss_dssp             HHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------------HHHHH
T ss_pred             HhcccC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHH
Confidence            865322 23699999999999999999999999999999999999999999998753                  69999


Q ss_pred             HHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccc
Q 036686          366 VKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMV  445 (508)
Q Consensus       366 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~  445 (508)
                      |+|+||++|+++ .++|.+++|++++||.|||||.|+++.+++||||++|+||++|+|+||              ...++
T Consensus       280 i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~--------------~~~~~  344 (408)
T 3abb_A          280 VEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN--------------ARHHV  344 (408)
T ss_dssp             HHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC--------------CTTCC
T ss_pred             HHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC--------------CCCCC
Confidence            999999999999 589999999999999999999999999999999999999999999996              13589


Q ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          446 PFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       446 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |||+|+|.|+|++||++|++++++.|+++| +++++.+.. +.....+.+++...+++|++++|
T Consensus       345 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          345 GFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLD-EVPIKAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GSCBCCTTSCCSBSCCEEECSCC
T ss_pred             CCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCcc-ccccccCcccCCcceeEEEeCCC
Confidence            999999999999999999999999999999 898875321 22223455677889999999987


No 56 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=1.2e-58  Score=440.57  Aligned_cols=374  Identities=15%  Similarity=0.190  Sum_probs=295.7

Q ss_pred             CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCC--C----Cce--EEe-ec----Cccce
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPD--S----PIR--LVF-SV----GKCAI  120 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~--~----~~~--~~~-~~----~~~~~  120 (508)
                      .+.+..+.++ ++||||+++++++.+.++|++|+.+++++.++  .|++++..  .    .+.  ..+ ..    ...++
T Consensus        14 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   90 (404)
T 1z8o_A           14 VDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATNM   90 (404)
T ss_dssp             SSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSSG
T ss_pred             cCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccccc
Confidence            3567778899 89999999999999999999999999999765  57666532  1    110  001 00    11234


Q ss_pred             eeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccc
Q 036686          121 NSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKIS  199 (508)
Q Consensus       121 ~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~  199 (508)
                      .. .+|+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+..     ++.+|+...+ ..+++++++.+ ||.+.+
T Consensus        91 ~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~  162 (404)
T 1z8o_A           91 GT-SDPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVGD-----SGVVDIVDRFAHPLPIKVICEL-LGVDEK  162 (404)
T ss_dssp             GG-CCTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSCS-----SSEEEHHHHTTTHHHHHHHHHH-TTCCGG
T ss_pred             cc-CCCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhhh-----cCCcchHHHHhHHHHHHHHHHH-hCCCHH
Confidence            33 4799999999955 78999999999999999999999988853     4579998655 68999999974 998864


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccch
Q 036686          200 EERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGA  279 (508)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  279 (508)
                      +.  +.+......+.. .      ..|       . .++..++.+.+.+++.+.++++++..             ..   
T Consensus       163 ~~--~~~~~~~~~~~~-~------~~p-------~-~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---  209 (404)
T 1z8o_A          163 YR--GEFGRWSSEILV-M------DPE-------R-AEQRGQAAREVVNFILDLVERRRTEP-------------GD---  209 (404)
T ss_dssp             GT--TTHHHHHHHHHC-C------CGG-------G-HHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---
T ss_pred             HH--HHHHHHHHHHhc-c------CCh-------h-HHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---
Confidence            32  233333333322 1      012       1 34556667778888888888776521             11   


Q ss_pred             hhHHhhhcC-CCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccC
Q 036686          280 AYVDSLFGL-EPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEK  358 (508)
Q Consensus       280 ~~~~~ll~~-~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~  358 (508)
                      |+++.+++. .. ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                 
T Consensus       210 dll~~ll~~~~~-~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------  271 (404)
T 1z8o_A          210 DLLSALIRVQDD-DDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP-----------------  271 (404)
T ss_dssp             SHHHHHHHCEET-TTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------
T ss_pred             CHHHHHHhhhcc-cCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------
Confidence            789999875 32 22369999999999999999999999999999999999999999999984                 


Q ss_pred             CchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccC
Q 036686          359 MPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTG  438 (508)
Q Consensus       359 l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~  438 (508)
                       .|++|||+|+||++|+++ .++|.+++|++++|+.||||+.|+++.+++||||++|+||++|+|+||.           
T Consensus       272 -~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~-----------  338 (404)
T 1z8o_A          272 -SALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT-----------  338 (404)
T ss_dssp             -GGHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-----------
T ss_pred             -HhHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC-----------
Confidence             279999999999999999 5789999999999999999999999999999999999999999999982           


Q ss_pred             CCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEee
Q 036686          439 TRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVIL  506 (508)
Q Consensus       439 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  506 (508)
                         ..++|||+|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++.+.+++|+++
T Consensus       339 ---~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~l~v~~~  403 (404)
T 1z8o_A          339 ---RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDAD-DVVWRRSLLLRGIDHLPVRLD  403 (404)
T ss_dssp             ---TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCCCCCSSSCCCSCCEEETT
T ss_pred             ---CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCC-cceeccccccCCcceeEEEeC
Confidence               2589999999999999999999999999999999 588876421 222234566778889998863


No 57 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=2.2e-58  Score=440.78  Aligned_cols=351  Identities=17%  Similarity=0.155  Sum_probs=283.2

Q ss_pred             chHHHHHHHHHHhCCeEEEEcC-CeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEee------cCccceeeCCCCh
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMG-QRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFS------VGKCAINSAEYGP  127 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~-~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  127 (508)
                      +.+..+.+++++ |||++++++ |.+.++|++|+.+++++.++  .|++++....+.....      ....++.. .+|+
T Consensus        30 dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~dg~  105 (417)
T 3tyw_A           30 AAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIR-TDAP  105 (417)
T ss_dssp             SCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGG-CCHH
T ss_pred             CchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhh-cCCc
Confidence            344458899988 999999996 68999999999999999765  5666432111111000      11223333 4799


Q ss_pred             hHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHH
Q 036686          128 LWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHI  206 (508)
Q Consensus       128 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~  206 (508)
                      .|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+...    ++++|+...+ ..++.++++.+ ||.+.++.  +.+
T Consensus       106 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--~~~  177 (417)
T 3tyw_A          106 EHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLAA----GGPVDLVSAYANAVSTSVICEL-LGIPRHDL--EFF  177 (417)
T ss_dssp             HHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHHH----CSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT--THH
T ss_pred             HHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhh----CCCcchHHHHHHHHHHHHHHHH-hCCCHHHH--HHH
Confidence            999999965 789999999999999999999999999762    6679999887 57889999887 99987543  233


Q ss_pred             HHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhh
Q 036686          207 ESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLF  286 (508)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  286 (508)
                      ......+....        +.        .+...++.+.+.+++.+.++++++..             ..   |+++.++
T Consensus       178 ~~~~~~~~~~~--------~~--------~~~~~~~~~~l~~~~~~~i~~r~~~~-------------~~---d~l~~ll  225 (417)
T 3tyw_A          178 RDVTRISGSRN--------ST--------AEQVSEALGGLFGLLGGLVAERREEP-------------RD---DLISKLV  225 (417)
T ss_dssp             HHHHHHHHSSS--------SC--------TTHHHHHHHHHHHHHHHHHHHHHSSC-------------CS---SHHHHHH
T ss_pred             HHHHHHHhccc--------CC--------HHHHHHHHHHHHHHHHHHHHHHhhCC-------------CC---CHHHHHH
Confidence            33333322110        10        12445666777888888887766521             11   8999998


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHH
Q 036686          287 GLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVV  366 (508)
Q Consensus       287 ~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i  366 (508)
                      +...++ +.++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||
T Consensus       226 ~~~~~~-~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i  286 (417)
T 3tyw_A          226 TDHLVP-GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------------LMPAAV  286 (417)
T ss_dssp             HHTTTT-TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG------------------GHHHHH
T ss_pred             HhcccC-CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------HHHHHH
Confidence            765443 3699999999999999999999999999999999999999999999843                  699999


Q ss_pred             HhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCcccc
Q 036686          367 KETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVP  446 (508)
Q Consensus       367 ~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~  446 (508)
                      +|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|+||.              ..++|
T Consensus       287 ~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--------------~~~l~  352 (417)
T 3tyw_A          287 DELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD--------------NHHVA  352 (417)
T ss_dssp             HHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC--------------CCCCT
T ss_pred             HHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC--------------CCCCC
Confidence            9999999999987789999999999999999999999999999999999999999999982              35999


Q ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCC
Q 036686          447 FGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPG  482 (508)
Q Consensus       447 Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~  482 (508)
                      ||+|+|.|+|++||++|++++++.|+++| +++++++
T Consensus       353 FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          353 FGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             TCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             CCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            99999999999999999999999999999 9998853


No 58 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=2.5e-59  Score=445.83  Aligned_cols=374  Identities=14%  Similarity=0.145  Sum_probs=292.4

Q ss_pred             chHHHHHHHHHHhCCeE-----EEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC-Cce-EEe-e-cCccceeeCCC
Q 036686           55 HFIFIVRDLRKKYGPIF-----TMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS-PIR-LVF-S-VGKCAINSAEY  125 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~-----~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~-~~~-~~~-~-~~~~~~~~~~~  125 (508)
                      +.+..+.+++ +||||+     ++.+  .+.++|+||+.+++++.++ ..|++++... .+. ..+ + .+..++.+. +
T Consensus        26 ~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~-~  100 (414)
T 2uuq_A           26 NPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ-D  100 (414)
T ss_dssp             CCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC-C
T ss_pred             CchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC-C
Confidence            5566788885 689999     7765  6789999999999999775 5687765432 111 011 1 112244444 7


Q ss_pred             ChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhh-HHHHHHHHhhhhhhhcccccchHHHH
Q 036686          126 GPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVM-SSCRLTICSILICLCFGAKISEERIK  204 (508)
Q Consensus       126 ~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fg~~~~~~~~~  204 (508)
                      |+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+...     +.+|+. .++..+++++++. +||.+.++  .+
T Consensus       101 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--~~  171 (414)
T 2uuq_A          101 PPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRAN-----GGGDIVTELFKPLPSMVVAH-YLGVPEED--WT  171 (414)
T ss_dssp             TTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHT-----TEEEHHHHTTTHHHHHHHHH-HTTCCGGG--HH
T ss_pred             chhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccHHHHHHHHhHHHHHHH-HhCCCHHH--HH
Confidence            99999999965 789999999999999999999999999762     358997 5667999999998 69998753  23


Q ss_pred             HHHHHHHHHHHhcCCCccccc-ccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHH
Q 036686          205 HIESILKDVMLITSPQLPDFL-PILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVD  283 (508)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (508)
                      .+.+....+....      ++ |..        .+..++.+.+.+++.+.++++++..             ..   |+++
T Consensus       172 ~~~~~~~~~~~~~------~~~p~~--------~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~  221 (414)
T 2uuq_A          172 QFDGWTQAIVAAN------AVDGAT--------TGALDAVGSMMAYFTGLIERRRTEP-------------AD---DAIS  221 (414)
T ss_dssp             HHHHHHHHHHHHH------HC-------------CCHHHHHHHHHHHHHHHHHHTTSC-------------CS---SHHH
T ss_pred             HHHHHHHHHHhhc------ccCCch--------hHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHH
Confidence            3444444333210      11 210        1233455667777777777665410             11   8899


Q ss_pred             hhhcCCCC-CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchH
Q 036686          284 SLFGLEPT-GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYL  362 (508)
Q Consensus       284 ~ll~~~~~-~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l  362 (508)
                      .+++.... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  +|+
T Consensus       222 ~ll~~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l  283 (414)
T 2uuq_A          222 HLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------------------EGI  283 (414)
T ss_dssp             HHHHTTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGH
T ss_pred             HHHhcccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHH
Confidence            99876531 22258899999999999999999999999999999999999999999985                  389


Q ss_pred             HHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCC-CCCCCCCCCcccCCCCCCccccCCCC
Q 036686          363 DAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMW-SDPGEFRPERFLEGDGVDVDVTGTRG  441 (508)
Q Consensus       363 ~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~  441 (508)
                      +|||+|+||++|+++ .++|.+++|++++||.||||+.|+++.+++||||++| +||++|+||||.              
T Consensus       284 ~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~--------------  348 (414)
T 2uuq_A          284 PDAVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP--------------  348 (414)
T ss_dssp             HHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC--------------
T ss_pred             HHHHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC--------------
Confidence            999999999999999 5789999999999999999999999999999999999 999999999983              


Q ss_pred             CccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          442 VKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       442 ~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      ..++|||+|+|.|+|++||++|++++++.|+++| +++++++ .  .....+.+++++.+++|+++||
T Consensus       349 ~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~-~--~~~~~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          349 RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAES-R--IVWSGGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG-G--CEECCCSSBCCEEECEEEEC--
T ss_pred             CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC-C--ccccccccccCcceeEEEecCC
Confidence            2489999999999999999999999999999999 6998742 2  2223455677888999999987


No 59 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=7.5e-58  Score=438.12  Aligned_cols=379  Identities=16%  Similarity=0.139  Sum_probs=300.0

Q ss_pred             chHHHHHHHHHHhCCeEEEEcC-------CeeEEEeCCHHHHHHHHHhcCCCcCCCCCC--CCceEEeecCccceeeCCC
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMG-------QRTVVIVTSSQLIHEALVQRGPEFASRPPD--SPIRLVFSVGKCAINSAEY  125 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~-------~~~~vvv~~p~~~~~il~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  125 (508)
                      +.+..+.+++ +||||+++.++       +.+.++|+||+.++++|.++ ..|++++..  ......++....++.+. +
T Consensus        45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~-d  121 (435)
T 2wm5_A           45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVL-D  121 (435)
T ss_dssp             HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGC-C
T ss_pred             ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccC-C
Confidence            4566788886 68999999886       67899999999999999765 468776531  10100011112234443 7


Q ss_pred             ChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHH
Q 036686          126 GPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIK  204 (508)
Q Consensus       126 ~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~  204 (508)
                      |+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+....  ++..+|+..++ ..+++++++.+ ||.+.++.  +
T Consensus       122 g~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~--~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~--~  195 (435)
T 2wm5_A          122 DPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIANN--PDRQADLVSELAGPLPLQIICDM-MGIPKADH--Q  195 (435)
T ss_dssp             TTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHC--TTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH--H
T ss_pred             cHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCcEehHHHHHHHHHHHHHHHH-cCCCHHHH--H
Confidence            99999999965 7899999999999999999999999997642  14578998765 78999999999 99987542  3


Q ss_pred             HHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHh
Q 036686          205 HIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDS  284 (508)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (508)
                      .+.+....+.....       |.+.+    ..++..++.+.+.+++.+.++++++..             ..   |+++.
T Consensus       196 ~~~~~~~~~~~~~~-------p~~~~----~~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~~  248 (435)
T 2wm5_A          196 RIFHWTNVILGFGD-------PDLAT----DFDEFMQVSADIGAYATALAEDRRVNH-------------HD---DLTSS  248 (435)
T ss_dssp             HHHHHHHHHHHTTC-------TTSCC----CHHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHH
T ss_pred             HHHHHHHHHhccCC-------cchhh----hHHHHHHHHHHHHHHHHHHHHHHhcCC-------------CC---CHHHH
Confidence            45555544443211       22211    123556677788888888888776521             11   89999


Q ss_pred             hhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHH
Q 036686          285 LFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDA  364 (508)
Q Consensus       285 ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a  364 (508)
                      +++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.                 |++|
T Consensus       249 ll~~~~~-~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~-----------------~l~a  310 (435)
T 2wm5_A          249 LVEAEVD-GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDG-----------------LAPT  310 (435)
T ss_dssp             HHHCCBT-TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHHH-----------------HHHH
T ss_pred             HHhhhcc-CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChHh-----------------HHHH
Confidence            9976532 336999999999999999999999999999999999999999999999763                 7999


Q ss_pred             HHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCcc
Q 036686          365 VVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKM  444 (508)
Q Consensus       365 ~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~  444 (508)
                      ||+|+||++|+++ .++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||              +..+
T Consensus       311 ~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--------------~~~~  375 (435)
T 2wm5_A          311 AVEEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN--------------PNPH  375 (435)
T ss_dssp             HHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC--------------SCCC
T ss_pred             HHHHHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC--------------CCCC
Confidence            9999999999999 578999999999999999999999999999999999999999999993              1358


Q ss_pred             ccCCC-CCCCCCChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccceeeeecCceeEEee
Q 036686          445 VPFGA-GRRICPAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYAFTVVMKNSLKAVIL  506 (508)
Q Consensus       445 ~~Fg~-G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  506 (508)
                      +|||+ |+|.|+|++||++|++++++.|+++|+ ++++++.  +  ...+.+++....++|+++
T Consensus       376 lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~--~~~~~~~~~~~~lpv~~~  435 (435)
T 2wm5_A          376 LGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEP--A--RLLSQFIHGIKTLPVTWS  435 (435)
T ss_dssp             CTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--E--ECCCSSBCCEEECEEECC
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECCCc--c--ccccccccCccceeEEeC
Confidence            99999 999999999999999999999999997 9987521  2  133445566677888763


No 60 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.4e-58  Score=439.86  Aligned_cols=370  Identities=15%  Similarity=0.155  Sum_probs=290.6

Q ss_pred             CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHH
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLR  133 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R  133 (508)
                      .+.+..+.+++++ |||+++..++ +.++|+||+.+++++.+. ..|++++...... ..+.+. ......+|+.|+++|
T Consensus        24 ~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~-~~~~~~-~~~~~~~g~~h~~~R   98 (396)
T 3oft_A           24 QDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPG-LGKVMQ-FIPLQQDGAEHKAFR   98 (396)
T ss_dssp             TCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTT-HHHHHC-CTTTTCCHHHHHHHH
T ss_pred             cChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCc-cccccc-cCccccCCcHHHHHH
Confidence            4678889999998 9999998874 488999999999999554 5777766322111 111111 223345799999999


Q ss_pred             HHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHHHHHHH
Q 036686          134 RNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIESILKD  212 (508)
Q Consensus       134 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~  212 (508)
                      +.+ .+.|++..++.+.+.+.+.++.+++.+..     ++.+|+...+ ..++.++++. +||.+.++  ...+......
T Consensus        99 ~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--~~~~~~~~~~  169 (396)
T 3oft_A           99 TPV-MKGLASRFVVALEPKVQAVARKLMESLRP-----RGSCDFVSDFAEILPLNIFLT-LIDVPLED--RPRLRQLGVQ  169 (396)
T ss_dssp             HHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGG-----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG--HHHHHHHHHH
T ss_pred             HHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh-----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHH
Confidence            965 78999999999999999999999999975     3467876665 4455555555 68876532  3444444444


Q ss_pred             HHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCC
Q 036686          213 VMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTG  292 (508)
Q Consensus       213 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~  292 (508)
                      +....        .         .+...++.+.+.+++.+.++++++..             ..   |+++.+++...+ 
T Consensus       170 ~~~~~--------~---------~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---d~l~~ll~~~~~-  215 (396)
T 3oft_A          170 LTRPD--------G---------SMTVEQLKQAADDYLWPFIEKRMAQP-------------GD---DLFSRILSEPVG-  215 (396)
T ss_dssp             HHSCC--------S---------SCCHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHTSCBT-
T ss_pred             HhCCC--------C---------HHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHHhhcc-
Confidence            33110        0         11334556677888888888877631             11   899999987543 


Q ss_pred             CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcC
Q 036686          293 REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRR  372 (508)
Q Consensus       293 ~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl  372 (508)
                      +..++++++++++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|+||+
T Consensus       216 ~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl  277 (396)
T 3oft_A          216 GRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIPAAADELMRR  277 (396)
T ss_dssp             TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHHHh
Confidence            33799999999999999999999999999999999999999999999964                  789999999999


Q ss_pred             CCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCC
Q 036686          373 HPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRR  452 (508)
Q Consensus       373 ~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r  452 (508)
                      +|++  .++|.+++|++++||.||||+.|+++.+++||||++|+||++|+|+||++            +..|+|||+|+|
T Consensus       278 ~p~~--~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~------------~~~~~~FG~G~r  343 (396)
T 3oft_A          278 YPTV--AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA------------PIRHTTMGVGAH  343 (396)
T ss_dssp             CCCB--EEEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC------------GGGSSTTCCGGG
T ss_pred             cCcc--cCceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC------------CCCcccCCCCCc
Confidence            9999  47899999999999999999999999999999999999999999999963            246999999999


Q ss_pred             CCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEee
Q 036686          453 ICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVIL  506 (508)
Q Consensus       453 ~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  506 (508)
                      .|+|++||++|++++++.|+++| +++++++......   +..++....++|+++
T Consensus       344 ~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~~~~---~~~~~~~~~lpv~~~  395 (396)
T 3oft_A          344 RCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMK---GGNVGACTALPLVWR  395 (396)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSCCEEE---CSSBCEEEECEEEEC
T ss_pred             cCcCHHHHHHHHHHHHHHHHHhCCCceECCCCCceec---cccccCcccceEEeC
Confidence            99999999999999999999999 9999876543222   223444556888764


No 61 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=1.8e-58  Score=444.82  Aligned_cols=385  Identities=16%  Similarity=0.145  Sum_probs=296.4

Q ss_pred             chHHHHHHHHHHhCCeE--EEE-cCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEee------------cCccc
Q 036686           55 HFIFIVRDLRKKYGPIF--TMQ-MGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFS------------VGKCA  119 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~--~~~-~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~------------~~~~~  119 (508)
                      +.+..+.++ ++||||+  ++. +++.+.++|++++++++++.+. ..|++++..........            ....+
T Consensus        46 ~p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~  123 (450)
T 3tkt_A           46 PLLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVES  123 (450)
T ss_dssp             HHHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCC
T ss_pred             CchHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccC
Confidence            366778888 5789999  888 6788999999999999999665 67877654332111100            01112


Q ss_pred             eeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhccccc
Q 036686          120 INSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKI  198 (508)
Q Consensus       120 ~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~  198 (508)
                      +. ..+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+...    ++.+|+...+ ..+++++++.+ ||.+.
T Consensus       124 l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~~~dl~~~~~~~~~~~vi~~l-~G~~~  196 (450)
T 3tkt_A          124 LV-QMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLGA----GEEGDFMALVAAPYPLHVVMQI-LGVPP  196 (450)
T ss_dssp             GG-GCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHHT----CSEEEHHHHTTTHHHHHHHHHH-TTCCG
T ss_pred             cc-cCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEeeHHHHHHHHHHHHHHHH-cCCCh
Confidence            33 34799999999965 789999999999999999999999999763    5689988877 68999999985 99775


Q ss_pred             chHHHHHHHHHHHHHHHhcCCCcccccccch--hhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccc
Q 036686          199 SEERIKHIESILKDVMLITSPQLPDFLPILT--PLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSP  276 (508)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  276 (508)
                      ++  ...+.+....+...   ......++..  .......++..++.+.+.+++.+.++++++..             ..
T Consensus       197 ~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~  258 (450)
T 3tkt_A          197 ED--EPKMLFLTQQMFGG---QDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP-------------TD  258 (450)
T ss_dssp             GG--HHHHHHHHHTTSCC---C----------------HHHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS
T ss_pred             hH--HHHHHHHHHHHhcc---ccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC
Confidence            33  23444443332211   1111122111  11122345666777888888888888876521             11


Q ss_pred             cchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccc
Q 036686          277 IGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDV  356 (508)
Q Consensus       277 ~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~  356 (508)
                         |+++.+++... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+               
T Consensus       259 ---dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------  319 (450)
T 3tkt_A          259 ---DVATVIANAVV-DGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR---------------  319 (450)
T ss_dssp             ---SHHHHHHTCEE-TTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------
T ss_pred             ---CHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH---------------
Confidence               78999887653 22369999999999999999999999999999999999999999999985               


Q ss_pred             cCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccc
Q 036686          357 EKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDV  436 (508)
Q Consensus       357 ~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~  436 (508)
                         +|++|||+|+||++|+++ .++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||          
T Consensus       320 ---~~l~a~i~E~LRl~pp~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~----------  385 (450)
T 3tkt_A          320 ---NLLPGIVEEAIRWTTPVQ-HFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRP----------  385 (450)
T ss_dssp             ---GGHHHHHHHHHHHHCSBC-EEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC----------
T ss_pred             ---HHHHHHHHHHHHhCCCcc-CcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCC----------
Confidence               379999999999999999 478999999999999999999999999999999999999999999994          


Q ss_pred             cCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          437 TGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       437 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                          ...++|||+|+|.|+|++||++|++++++.|+++|+ ++++++ +   ......+++....++|++++
T Consensus       386 ----~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~---~~~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          386 ----ANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGE-P---KRVNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             ----TTCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSC-C---EECCCSSBCCEEECEEEEEE
T ss_pred             ----CCCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCC-c---ccccCcccCCcccceEEEec
Confidence                235899999999999999999999999999999998 666632 1   22233455566678998875


No 62 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=3.3e-58  Score=437.90  Aligned_cols=392  Identities=15%  Similarity=0.125  Sum_probs=293.7

Q ss_pred             CCCCCCCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC
Q 036686           29 GPKNLPPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPPDS  107 (508)
Q Consensus        29 ~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~  107 (508)
                      .+....+||.. |+-   ..+..   +.+..+.+++ +||||+++++ |+.+.++|++|+.+++++.++  .|++++...
T Consensus         4 ~~~~~~~g~~~-~~~---~~~~~---~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~   73 (413)
T 2z36_A            4 NVADELAGLEL-PVE---RGCPF---APPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKD   73 (413)
T ss_dssp             ------CCCEE-CCC---CCBTT---BCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTST
T ss_pred             cHHHHhccccC-CCC---ccccc---CchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCcccc
Confidence            34556677763 432   12222   3445578887 7899999997 889999999999999999763  576654321


Q ss_pred             CceE---Eeec-----Cccc-eeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhh
Q 036686          108 PIRL---VFSV-----GKCA-INSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVM  178 (508)
Q Consensus       108 ~~~~---~~~~-----~~~~-~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~  178 (508)
                      .+..   ....     ++.+ +.+ .+|+.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+...   .++.+|+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~---~~~~~d~~  148 (413)
T 2z36_A           74 GFPLFTLDAATLQQLRSQPPLMLG-MDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLAT---DQRPVDLV  148 (413)
T ss_dssp             TCCCSSCCHHHHHHHTTSCCCGGG-CCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTC---SCSSEEHH
T ss_pred             Cccccccccccccccccccccccc-cCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHH
Confidence            1110   0011     1223 433 4799999999955 778999999999999999999999999642   15578988


Q ss_pred             HHHH-HHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHH
Q 036686          179 SSCR-LTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNR  257 (508)
Q Consensus       179 ~~~~-~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  257 (508)
                      ..+. .+++++++.+ ||.+.++.  +.+......    .....   .|          ++..++.+.+.+++.+.++++
T Consensus       149 ~~~~~~~~~~vi~~~-~G~~~~~~--~~~~~~~~~----~~~~~---~~----------~~~~~~~~~~~~~~~~~i~~r  208 (413)
T 2z36_A          149 QALSLPVPSLVICEL-LGVPYTDH--DFFQSRTTM----MVSRT---SM----------EDRRRAFAELRAYIDDLITRK  208 (413)
T ss_dssp             HHTTTHHHHHHHHHH-HTCCGGGH--HHHHHHHHH----TTCSS---CH----------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhHHHHHHHH-hCCCHHHH--HHHHHHHHH----Hhccc---Cc----------HHHHHHHHHHHHHHHHHHHHH
Confidence            6554 6889999984 99886532  233332221    11100   01          344566677788888888776


Q ss_pred             HHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHH
Q 036686          258 KAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKL  337 (508)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~l  337 (508)
                      ++..             ..   |+++.+++... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus       209 ~~~~-------------~~---dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l  271 (413)
T 2z36_A          209 ESEP-------------GD---DLFSRQIARQR-QEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVV  271 (413)
T ss_dssp             HSSC-------------CS---SHHHHHHHHHH-HHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             HhCC-------------CC---CHHHHHHHhhc-CCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHH
Confidence            6421             11   78888886532 2236999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCC
Q 036686          338 YKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSD  417 (508)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  417 (508)
                      ++|+                  .|++|||+|+||++|+++..++|.+++|++++||.|||||.|+++.+++||||++|+|
T Consensus       272 ~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~d  333 (413)
T 2z36_A          272 KANP------------------GRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKD  333 (413)
T ss_dssp             HHCG------------------GGHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSS
T ss_pred             HhCh------------------HHHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCC
Confidence            9984                  2799999999999999996678999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeee
Q 036686          418 PGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVV  496 (508)
Q Consensus       418 p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~  496 (508)
                      |++|||+||.              ..++|||+|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++
T Consensus       334 P~~F~PeR~~--------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~  398 (413)
T 2z36_A          334 PAVLDVERGA--------------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPME-DVPFKGDSVIY  398 (413)
T ss_dssp             TTSCCTTCCC--------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG-GSCBCTTSSSC
T ss_pred             ccccCCCCCC--------------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcc-cceeccccccc
Confidence            9999999982              2489999999999999999999999999999999 588876521 22223344555


Q ss_pred             ecCceeEEe
Q 036686          497 MKNSLKAVI  505 (508)
Q Consensus       497 ~~~~~~v~~  505 (508)
                      ....++|++
T Consensus       399 g~~~lpv~~  407 (413)
T 2z36_A          399 GVHELPVTW  407 (413)
T ss_dssp             CBSCCEEEC
T ss_pred             CcceeeEEe
Confidence            666777765


No 63 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=1.8e-57  Score=430.75  Aligned_cols=364  Identities=18%  Similarity=0.195  Sum_probs=288.0

Q ss_pred             hHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCC-ceEEeecCccc--eeeCCCC-----
Q 036686           56 FIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPPDSP-IRLVFSVGKCA--INSAEYG-----  126 (508)
Q Consensus        56 ~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~-----  126 (508)
                      .+..+.++ ++||||+++++ ++.+.++|+||+.+++++.++  .|.+++.... ..... .+. +  +.. .+|     
T Consensus        28 p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~-~~~l~~-~~g~~~~~  101 (404)
T 2xbk_A           28 LSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSP-FLDLLI-SDADAESG  101 (404)
T ss_dssp             CCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCH-HHHTTC-BCSCHHHH
T ss_pred             ccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccc-ccccee-eCCCCCCC
Confidence            34457888 89999999997 889999999999999999664  4665543221 11111 122 2  333 378     


Q ss_pred             -hhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHH
Q 036686          127 -PLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIK  204 (508)
Q Consensus       127 -~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~  204 (508)
                       +.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+...    ++++|+...+ ..+++++++. +||.+.++.  +
T Consensus       102 ~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~--~  173 (404)
T 2xbk_A          102 RRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIAQ----GPPGDLHGELTVPFALTVLCE-VIGVPPQRR--A  173 (404)
T ss_dssp             HHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHT----CSSEEHHHHTHHHHHHHHHHH-HHTCCGGGH--H
T ss_pred             CchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH-HhCCCHHHH--H
Confidence             9999999955 789999999999999999999999999742    5579998665 5689999987 799886432  3


Q ss_pred             HHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHh
Q 036686          205 HIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDS  284 (508)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (508)
                      .+.+....+..    ..   .|       .   +..++.+.+.+++.+.++++++..             ..   |+++.
T Consensus       174 ~~~~~~~~~~~----~~---~~-------p---~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~~  220 (404)
T 2xbk_A          174 ELTTLLAGIAK----LD---DR-------E---GAVRAQDDLFGYVAGLVEHKRAEP-------------GP---DIISR  220 (404)
T ss_dssp             HHHHHHHHHTB----SS---CH-------H---HHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHH
T ss_pred             HHHHHHHHHHh----cc---Cc-------H---HHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHH
Confidence            34333332211    00   01       0   345566777888888888776521             11   78887


Q ss_pred             hhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHH
Q 036686          285 LFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDA  364 (508)
Q Consensus       285 ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a  364 (508)
                      + +    ++ .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|
T Consensus       221 l-~----~~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a  276 (404)
T 2xbk_A          221 L-N----DG-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------------VMAR  276 (404)
T ss_dssp             H-H----SS-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH------------------HHHH
T ss_pred             h-h----cC-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHH
Confidence            7 2    12 699999999999999999999999999999999999999999999964                  6999


Q ss_pred             HHHhhhcCCCCCC-cccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCc
Q 036686          365 VVKETLRRHPPGH-FLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVK  443 (508)
Q Consensus       365 ~i~E~lRl~p~~~-~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~  443 (508)
                      ||+|+||++|+++ ..++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||.              ..
T Consensus       277 ~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--------------~~  342 (404)
T 2xbk_A          277 AVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP--------------NP  342 (404)
T ss_dssp             HHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS--------------CC
T ss_pred             HHHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC--------------CC
Confidence            9999999999999 55789999999999999999999999999999999999999999999982              35


Q ss_pred             cccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEe
Q 036686          444 MVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVI  505 (508)
Q Consensus       444 ~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  505 (508)
                      ++|||+|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++.+..++|++
T Consensus       343 ~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          343 HLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVE-QLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             CCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCSSBTTCCBSCCEEEC
T ss_pred             CCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCC-cceeccCcccCCcceeeeeC
Confidence            89999999999999999999999999999999 798876421 22233455667778888864


No 64 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=2e-57  Score=430.06  Aligned_cols=366  Identities=15%  Similarity=0.141  Sum_probs=292.3

Q ss_pred             chHHHHHHHHHHhCCeEEEEcCC----eeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHH
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMGQ----RTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWR  130 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~~----~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~  130 (508)
                      +.+..+.+++ +||||+++++++    .++++|+||+.+++++ ++...|++++....... ...+. ...+..+|+.|+
T Consensus        13 ~p~~~~~~lr-~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~-~~~~~-~~~~~~~g~~~~   88 (384)
T 3oo3_A           13 DPVPEFEELQ-KAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEAD-RALLP-GILQAYDPPDHT   88 (384)
T ss_dssp             EECHHHHHHH-HTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC------CCCT-TCGGGCCTTHHH
T ss_pred             ChhHHHHHHH-hcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCcccccccc-ccccc-cccccCCChhHH
Confidence            4556688884 999999999876    8999999999999999 44567887765432221 11122 233345799999


Q ss_pred             HHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhcccccchHHHHHHHHHH
Q 036686          131 SLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESIL  210 (508)
Q Consensus       131 ~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~  210 (508)
                      ++|+.+ .+.|++..++.+.+.+.+.++.+++.+.+.    ++++|+..++...+.+.+...+||.+.++.  +.+.+..
T Consensus        89 ~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~--~~~~~~~  161 (384)
T 3oo3_A           89 RLRRTV-APAYSARRMERLRPRIEEIVEECLDDFESV----GAPVDFVRHAAWPIPAYIACEFLGVPRDDQ--AELSRMI  161 (384)
T ss_dssp             HHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHS----CSSEEHHHHTTTHHHHHHHHHHHTCCGGGH--HHHHHHH
T ss_pred             HHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHH
Confidence            999965 789999999999999999999999999652    668999999988887777788899886542  3444444


Q ss_pred             HHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCC
Q 036686          211 KDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEP  290 (508)
Q Consensus       211 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  290 (508)
                      ..+.. .                ...+...+..+.+.+++.+.++++++..             ..   |+++.+++.  
T Consensus       162 ~~~~~-~----------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------------~~---d~l~~ll~~--  206 (384)
T 3oo3_A          162 RESRE-S----------------RLPRQRTLSGLGIVNYTKRLTSGKRRDP-------------GD---GMIGVIVRE--  206 (384)
T ss_dssp             HHHHH-C----------------SCHHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHHH--
T ss_pred             HHHhc-c----------------CChHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHHh--
Confidence            44433 0                1123455667778888888888765421             11   788888875  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhh
Q 036686          291 TGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETL  370 (508)
Q Consensus       291 ~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~l  370 (508)
                       +++.++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.                  |+|||+|+|
T Consensus       207 -~~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------l~a~i~E~l  267 (384)
T 3oo3_A          207 -HGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------IDSATEEVL  267 (384)
T ss_dssp             -HGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------HHHHHHHHH
T ss_pred             -cCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------HHHHHHHHH
Confidence             2236999999999999999999999999999999999999999999999765                  899999999


Q ss_pred             cCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCC
Q 036686          371 RRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAG  450 (508)
Q Consensus       371 Rl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G  450 (508)
                      |++|+++..++|.+++|++++||.||||+.|+++.+++||     +||++|||+||              ...|+|||+|
T Consensus       268 Rl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~--------------~~~~~~FG~G  328 (384)
T 3oo3_A          268 RHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITRE--------------KATHMAFGHG  328 (384)
T ss_dssp             HHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCS--------------CCCCCTTCCS
T ss_pred             HhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCC--------------CCCcCCCCCC
Confidence            9999998778899999999999999999999999999999     99999999995              2469999999


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCccc-ceeeeecCceeEEe
Q 036686          451 RRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETY-AFTVVMKNSLKAVI  505 (508)
Q Consensus       451 ~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~  505 (508)
                      +|.|+|++||++|++++++.|+++| +++++++.. +..... +.+++....++|++
T Consensus       329 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          329 IHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEE-DLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCEECSSSSCCEESCCEEEC
T ss_pred             CcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCc-cceeecccccccCcceeeeeC
Confidence            9999999999999999999999999 999886532 222233 55667777888864


No 65 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=1.1e-57  Score=433.09  Aligned_cols=366  Identities=13%  Similarity=0.139  Sum_probs=281.5

Q ss_pred             HHHHHHhCCeEEEEcC-Ce---eEEEeCCHHHHHHHHHhcCCCcCCCCCC------CCceEEe-ecCccceeeCCCChhH
Q 036686           61 RDLRKKYGPIFTMQMG-QR---TVVIVTSSQLIHEALVQRGPEFASRPPD------SPIRLVF-SVGKCAINSAEYGPLW  129 (508)
Q Consensus        61 ~~~~~~yG~v~~~~~~-~~---~~vvv~~p~~~~~il~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~w  129 (508)
                      .+|+++ |||+++.++ |.   ++++|+||+.+++++.++ ..|+.++..      ..+.... .....++.. .+|+.|
T Consensus        20 ~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~   96 (398)
T 1lfk_A           20 DELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMD-YDPPEH   96 (398)
T ss_dssp             HHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGG-CCTTHH
T ss_pred             HHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCccc-cCCHHH
Confidence            346666 999999875 55   899999999999999333 346655431      1111110 011223444 479999


Q ss_pred             HHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHH-HHHhhhhhhhcccccchHHHHHHHH
Q 036686          130 RSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRL-TICSILICLCFGAKISEERIKHIES  208 (508)
Q Consensus       130 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~-~~~~~~~~~~fg~~~~~~~~~~~~~  208 (508)
                      +++|+.+ .+.|++..++.+.+.+.+.++.+++.+...    ++++|+..++.. ++.++++. +||.+.++.  +.+..
T Consensus        97 ~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~--~~~~~  168 (398)
T 1lfk_A           97 TRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMERA----GSPADLIAFVADKVPGAVLCE-LVGVPRDDR--DMFMK  168 (398)
T ss_dssp             HHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHH----CSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH--HHHHH
T ss_pred             HHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHHHHHHHHH-HcCCCHHHH--HHHHH
Confidence            9999955 678999999999999999999999999742    567999998886 88888887 599887532  23333


Q ss_pred             HHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcC
Q 036686          209 ILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGL  288 (508)
Q Consensus       209 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  288 (508)
                      ....++   .  .   .+        ..++..++.+.+.+++.+.++++++..             ..   |+++.+++.
T Consensus       169 ~~~~~~---~--~---~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~~ll~~  216 (398)
T 1lfk_A          169 LCHGHL---D--A---SL--------SQKRRAALGDKFSRYLLAMIARERKEP-------------GE---GMIGAVVAE  216 (398)
T ss_dssp             HHHHTT---C--T---TS--------CHHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHHH
T ss_pred             HHHHHH---h--c---cc--------chHHHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHHh
Confidence            332211   0  0   01        123455667778888888888776521             11   788888865


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHh
Q 036686          289 EPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKE  368 (508)
Q Consensus       289 ~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E  368 (508)
                      .   .+.++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|
T Consensus       217 ~---~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E  275 (398)
T 1lfk_A          217 Y---GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ------------------SAQRAVDE  275 (398)
T ss_dssp             H---GGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH------------------HHHHHHHH
T ss_pred             c---CCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHH
Confidence            4   23689999999999999999999999999999999999999999999864                  68999999


Q ss_pred             hhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCC
Q 036686          369 TLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFG  448 (508)
Q Consensus       369 ~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg  448 (508)
                      +||++|+++..++|.+++|++++||.|||||.|+++.+++||||++|+||++|+|+||.              ..++|||
T Consensus       276 ~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--------------~~~l~FG  341 (398)
T 1lfk_A          276 LIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP--------------IPHVAFG  341 (398)
T ss_dssp             HHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC--------------CCCCTTC
T ss_pred             HHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC--------------CCCCCCC
Confidence            99999999966789999999999999999999999999999999999999999999972              2489999


Q ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEe
Q 036686          449 AGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVI  505 (508)
Q Consensus       449 ~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  505 (508)
                      +|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++....++|++
T Consensus       342 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~  398 (398)
T 1lfk_A          342 HGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQ-DTEFRLTTPAYGLTELMVAW  398 (398)
T ss_dssp             CSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTC-CCEEECSSSBCEEEECEEEC
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCCCC-ccccccCcCcCCcccceeeC
Confidence            999999999999999999999999999 898875322 22233344556666777753


No 66 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=8.2e-58  Score=433.37  Aligned_cols=370  Identities=15%  Similarity=0.149  Sum_probs=284.1

Q ss_pred             chHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcC-C-CCCC--CCce--EEeecCccceeeCCCCh
Q 036686           55 HFIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFA-S-RPPD--SPIR--LVFSVGKCAINSAEYGP  127 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~-~-~~~~--~~~~--~~~~~~~~~~~~~~~~~  127 (508)
                      +.+..+.+| ++||||+++++ ++.+.++|+||+.+++++.++  .|. + ++..  ..+.  .+.+....++.+.    
T Consensus        17 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----   89 (396)
T 1n40_A           17 RIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI----   89 (396)
T ss_dssp             SCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH----
T ss_pred             CccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH----
Confidence            445568899 89999999998 789999999999999999664  465 4 3321  1110  0011011233332    


Q ss_pred             hHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHH
Q 036686          128 LWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHI  206 (508)
Q Consensus       128 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~  206 (508)
                      .|+++|+.+ .+.|++. ++.+.+.+.+.++.+++.+...    ++++|+...+ ..+++++++. +||.+.++  .+.+
T Consensus        90 ~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~  160 (396)
T 1n40_A           90 ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITE----GAPADLRNDFADPLATALHCK-VLGIPQED--GPKL  160 (396)
T ss_dssp             HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHH----CSCEETTTTTHHHHHHHHHHH-HHTCCGGG--HHHH
T ss_pred             HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHhHHHHHHH-HhCCChhh--HHHH
Confidence            899999855 6789999 9999999999999999999752    4578998665 4799999998 79998753  2334


Q ss_pred             HHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhh
Q 036686          207 ESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLF  286 (508)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  286 (508)
                      .+....+...    .. ..|         .++..++.+.+ +++.+.++    .         ..  ...   |+++.++
T Consensus       161 ~~~~~~~~~~----~~-~~p---------~~~~~~~~~~~-~~~~~~i~----~---------~~--~~~---dll~~ll  207 (396)
T 1n40_A          161 FRSLSIAFMS----SA-DPI---------PAAKINWDRDI-EYMAGILE----N---------PN--ITT---GLMGELS  207 (396)
T ss_dssp             HHTHHHHTBC----CS-SCC---------HHHHHHHHHHH-HHHHHHHH----C---------TT--CCS---HHHHHHH
T ss_pred             HHHHHHHhcc----cc-CCC---------HHHHHHHHHHH-HHHHHHHh----C---------CC--CCC---CHHHHHH
Confidence            4433332211    10 012         12344455556 66666665    0         00  012   8899888


Q ss_pred             cCCCC-CCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHH
Q 036686          287 GLEPT-GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAV  365 (508)
Q Consensus       287 ~~~~~-~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~  365 (508)
                      +.... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  .|++||
T Consensus       208 ~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~  269 (396)
T 1n40_A          208 RLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP------------------ELIPAG  269 (396)
T ss_dssp             HHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHH
T ss_pred             HhhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH------------------HHHHHH
Confidence            75411 23369999999999999999999999999999999999999999999984                  379999


Q ss_pred             HHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccc
Q 036686          366 VKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMV  445 (508)
Q Consensus       366 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~  445 (508)
                      |+|+||++|+++..++|.+++|++++||.|||||.|+++.+++||||++|+||++|+|+||.+             ..++
T Consensus       270 i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-------------~~~~  336 (396)
T 1n40_A          270 VEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP-------------TSHL  336 (396)
T ss_dssp             HHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST-------------TCSS
T ss_pred             HHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC-------------CCCC
Confidence            999999999999667899999999999999999999999999999999999999999999963             2589


Q ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEe
Q 036686          446 PFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVI  505 (508)
Q Consensus       446 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  505 (508)
                      |||+|+|.|+|++||++|++++++.|+++| +++++++.. +.....+.+++.+.+++|++
T Consensus       337 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          337 AFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPID-QLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCCSBSBCCBSCCEEEC
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCcc-ccccccccccCCcceeeeeC
Confidence            999999999999999999999999999999 598876421 22234456677788888864


No 67 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=4e-58  Score=440.00  Aligned_cols=380  Identities=17%  Similarity=0.211  Sum_probs=290.8

Q ss_pred             CchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEE-------eecCccceeeCCCC
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLV-------FSVGKCAINSAEYG  126 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~  126 (508)
                      .+.+..+.++ ++||||+++.+|   .++|++|+.+++++.+. ..++.++........       ......++.. .+|
T Consensus        29 ~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~dg  102 (418)
T 3r9b_A           29 ADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLF-LDP  102 (418)
T ss_dssp             TCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGG-CCT
T ss_pred             cCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhh-cCC
Confidence            4566778888 578999998665   89999999999999653 333333321100000       0011223333 379


Q ss_pred             hhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHH
Q 036686          127 PLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKH  205 (508)
Q Consensus       127 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~  205 (508)
                      +.|+++|+.+ .+.|++..++.+.+.+.+.++.+++ +..     ++.+|+...+ ..+++++++. +||.+.++.  +.
T Consensus       103 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~--~~  172 (418)
T 3r9b_A          103 PDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AVD-----GPEFNLIDNLAYPLPVAVICR-LLGVPIEDE--PK  172 (418)
T ss_dssp             THHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TCC-----SSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH--HH
T ss_pred             chHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hhc-----cCCeehHHHHhCcCCHHHHHH-HcCCCHHHH--HH
Confidence            9999999965 7899999999999999999999998 742     4478876554 6899999999 899887542  34


Q ss_pred             HHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhh
Q 036686          206 IESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSL  285 (508)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (508)
                      +......+......     .+.+.+......++..++.+.+.+++.+.++++++..             ..   |+++.+
T Consensus       173 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-------------~~---d~l~~l  231 (418)
T 3r9b_A          173 FSRASALLAAALDP-----FLALTGETSDLFDEQMKAGMWLRDYLRALIDERRRTP-------------GE---DLMSGL  231 (418)
T ss_dssp             HHHHHHHHHHTTSC-----HHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSC-------------CS---SHHHHH
T ss_pred             HHHHHHHHHhhcCc-----cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------Cc---cHHHHH
Confidence            44444443332221     1111111123345666777888888888887765421             11   788888


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHH
Q 036686          286 FGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAV  365 (508)
Q Consensus       286 l~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~  365 (508)
                      ++... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++||
T Consensus       232 l~~~~-~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~  292 (418)
T 3r9b_A          232 VAVEE-SGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------------RASAV  292 (418)
T ss_dssp             HHHHH-HSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GHHHH
T ss_pred             HHhhh-ccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------hHHHH
Confidence            86532 233699999999999999999999999999999999999999999999854                  78999


Q ss_pred             HHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccc
Q 036686          366 VKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMV  445 (508)
Q Consensus       366 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~  445 (508)
                      |+|+||++|+++. +.|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+|+              ...++
T Consensus       293 i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~--------------~~~~~  357 (418)
T 3r9b_A          293 IEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA--------------QIRHL  357 (418)
T ss_dssp             HHHHHHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS--------------CCCCC
T ss_pred             HHHHHHhCCcccc-ceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC--------------CCCCc
Confidence            9999999999988 46999999999999999999999999999999999999999999991              24589


Q ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          446 PFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       446 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |||+|+|.|+|++||++|++++++.|+++| +++++++    .....+.++++...++|+++||
T Consensus       358 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~----~~~~~~~~~~~~~~lpv~~~~r  417 (418)
T 3r9b_A          358 GFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE----PEYKRNLTLRGMSTLSIAVHHH  417 (418)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC----CEECSCSSBCCEEECEEEC---
T ss_pred             CCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC----CccccCCcccCcceeEEEecCC
Confidence            999999999999999999999999999999 8888764    1234456778888999999987


No 68 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.3e-57  Score=433.35  Aligned_cols=372  Identities=15%  Similarity=0.147  Sum_probs=293.3

Q ss_pred             CchHHHHHHHHHHhCCeEEEEcCC--eeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEE--eecC-ccceeeCCCChh
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQMGQ--RTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLV--FSVG-KCAINSAEYGPL  128 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~~~--~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~  128 (508)
                      .+.+..+.++++ ||||+++...|  .+.++|++++.+++++.+ ...|++++........  .... ..++ ...+|+.
T Consensus        37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~~~~~~~~~~~~~~l-~~~dg~~  113 (415)
T 3mgx_A           37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMMIGFDRDHPDNSGGRMM-VVSEHEQ  113 (415)
T ss_dssp             TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSSTTCCSSSCCTTTTTSG-GGCCHHH
T ss_pred             CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCccccccccccccccccCCCc-cccCcHH
Confidence            467777888886 99999986445  789999999999999944 3467766532221100  0001 2223 3357999


Q ss_pred             HHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHH
Q 036686          129 WRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIE  207 (508)
Q Consensus       129 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~  207 (508)
                      |+++|+. +.+.|++..++.+.+.+.+.++.+++.+..     .+.+|+..++ ..+++++++. +||.+.++  .+.+.
T Consensus       114 h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~~~  184 (415)
T 3mgx_A          114 HRKLRKL-VGPLLSRAAARKLAERVRIEVGDVLGRVLD-----GEVCDAATAIGPRIPAAVVCE-ILGVPAED--EDMLI  184 (415)
T ss_dssp             HHHHHHH-HGGGSSHHHHHHSHHHHHHHHHHHTTTSSS-----SSCEESTTTTTTHHHHHHHHH-HHTCCGGG--HHHHH
T ss_pred             HHHHHHH-hHhhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcchHHHHHHHHHHHHHHH-HcCCCHHH--HHHHH
Confidence            9999995 578999999999999999999999988754     3468998877 6799999998 58976433  34455


Q ss_pred             HHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhc
Q 036686          208 SILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFG  287 (508)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  287 (508)
                      +....+...   ....+.|.          ...++.+.+.+++.+.++++++..             ..   |+++.+++
T Consensus       185 ~~~~~~~~~---~~~~~~~~----------~~~~~~~~l~~~~~~~i~~rr~~~-------------~~---dll~~ll~  235 (415)
T 3mgx_A          185 DLTNHAFGG---EDELFDGM----------TPRQAHTEILVYFDELITARRKEP-------------GD---DLVSTLVT  235 (415)
T ss_dssp             HHHHHHTSC---CC----CC----------CHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHH
T ss_pred             HHHHHHHcc---cCcccchH----------HHHHHHHHHHHHHHHHHHHHHhCC-------------CC---CHHHHHHh
Confidence            544443321   11111121          112456677888888888776521             11   89999987


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHH
Q 036686          288 LEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVK  367 (508)
Q Consensus       288 ~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~  367 (508)
                      ..     .++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  +|++|||+
T Consensus       236 ~~-----~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~  292 (415)
T 3mgx_A          236 DD-----DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------ADVDTVVE  292 (415)
T ss_dssp             CT-----TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------SCHHHHHH
T ss_pred             CC-----CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHH
Confidence            54     58999999999999999999999999999999999999999999995                  79999999


Q ss_pred             hhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccC
Q 036686          368 ETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPF  447 (508)
Q Consensus       368 E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~F  447 (508)
                      |+||++|+++. ++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||-              ..++||
T Consensus       293 E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~--------------~~~l~F  357 (415)
T 3mgx_A          293 EVLRWTSPAMH-VLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP--------------NRHITF  357 (415)
T ss_dssp             HHHHHHCCBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS--------------CCCCTT
T ss_pred             HHHHhcCcccc-cceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC--------------CCCCCC
Confidence            99999999985 689999999999999999999999999999999999999999999972              358999


Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          448 GAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       448 g~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |+|+|.|+|++||++|++++++.|+++| +++++++.    ....+.+++....++|++++|
T Consensus       358 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~----~~~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          358 GHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREP----AWLRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             CCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCC----EECSCSSBCCEEECEEEEEEC
T ss_pred             CCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCc----ccccCCcccCceeeeEEEecC
Confidence            9999999999999999999999999999 89887432    223344566677899999998


No 69 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=1.4e-55  Score=421.27  Aligned_cols=378  Identities=16%  Similarity=0.129  Sum_probs=290.4

Q ss_pred             CchHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCCcCCCCC--CCCce------EEeecCccceeeCC
Q 036686           54 RHFIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPEFASRPP--DSPIR------LVFSVGKCAINSAE  124 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~  124 (508)
                      .+.+..+.+++++ |||+++.. ++.+.++|++++.+++++.+. ..|+..+.  .....      .....+..++. ..
T Consensus        38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~  114 (426)
T 3rwl_A           38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFI-AM  114 (426)
T ss_dssp             TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGG-GC
T ss_pred             CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCccc-cc
Confidence            4577778888876 99999987 567899999999999999665 45655431  00110      00111122233 34


Q ss_pred             CChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHH
Q 036686          125 YGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERI  203 (508)
Q Consensus       125 ~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~  203 (508)
                      +|+.|+++|+. +.+.|++..++.+.+.+.+.++.+++.+..     ++.+|+...+ ..++.++++. +||.+.++.  
T Consensus       115 dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~--  185 (426)
T 3rwl_A          115 DRPRHDEQRKA-VSPIVAPANLAALEGTIRERVSKTLDGLPV-----GEEFDWVDRVSIEITTQMLAT-LFDFPFEER--  185 (426)
T ss_dssp             CTTHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHTSCS-----SSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT--
T ss_pred             CchHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHhhc-----CCCcchHHHHHHHHHHHHHHH-HcCCCHHHH--
Confidence            79999999995 478999999999999999999999988732     6688977776 5677777765 899875432  


Q ss_pred             HHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHH
Q 036686          204 KHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVD  283 (508)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (508)
                      +.+......+.    . ...  +.+.    ...+...++.+.+.+++.+.+++++..    +        ...   |+++
T Consensus       186 ~~~~~~~~~~~----~-~~~--~~~~----~~~~~~~~~~~~~~~~~~~~i~~r~~~----~--------~~~---dll~  239 (426)
T 3rwl_A          186 RKLTRWSDVTT----A-APG--GGVV----ESWDQRKTELLECAAYFQVLWNERVNK----D--------PGN---DLIS  239 (426)
T ss_dssp             HHHHHHHHHHT----C-CTT--SSSC----SSHHHHHHHHHHHHHHHHHHHHHHHTS----C--------CCS---SHHH
T ss_pred             HHHHHHHHHHH----h-ccC--cccc----ccHHHHHHHHHHHHHHHHHHHHHHhhc----C--------CCC---CHHH
Confidence            23333322211    1 000  1000    113344555677888888888776321    0        111   8999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHH
Q 036686          284 SLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLD  363 (508)
Q Consensus       284 ~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~  363 (508)
                      .+++...+  +++++++++++++.+++||+|||+++++|++++|++||++|+++++|+                  +|++
T Consensus       240 ~ll~~~~~--~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~------------------~~l~  299 (426)
T 3rwl_A          240 MLAHSPAT--RNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP------------------ALVE  299 (426)
T ss_dssp             HHHHCGGG--GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHH
T ss_pred             HHHhcccC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HhHH
Confidence            99876432  358999999999999999999999999999999999999999999983                  4899


Q ss_pred             HHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCc
Q 036686          364 AVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVK  443 (508)
Q Consensus       364 a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~  443 (508)
                      +||+|+||++|+++. ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||.+             ..
T Consensus       300 a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~-------------~~  365 (426)
T 3rwl_A          300 TMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP-------------RQ  365 (426)
T ss_dssp             HHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT-------------TC
T ss_pred             HHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC-------------CC
Confidence            999999999999987 6899999999999999999999999999999999999999999999932             45


Q ss_pred             cccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          444 MVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       444 ~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                      ++|||+|+|.|+|++||++|++++++.|+++| +++++++.    ....+.+++....++|+++|
T Consensus       366 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~----~~~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          366 HLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP----ERVRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             CSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCC----EECCCSSBCCEEECEEEEEC
T ss_pred             ccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCC----cccccccccCcceeeEEEeC
Confidence            99999999999999999999999999999999 99987542    22234456667789999876


No 70 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=9.9e-56  Score=415.14  Aligned_cols=354  Identities=15%  Similarity=0.198  Sum_probs=273.5

Q ss_pred             HHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCC-----CCCc--eEE-eec-CccceeeCCCChh
Q 036686           58 FIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPP-----DSPI--RLV-FSV-GKCAINSAEYGPL  128 (508)
Q Consensus        58 ~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~-----~~~~--~~~-~~~-~~~~~~~~~~~~~  128 (508)
                      ..+.++ ++||||+++  |  +.++|++++.+++++.+. ..|++++.     ....  ... ++. .+.++.. .+|+.
T Consensus         3 ~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~   75 (368)
T 1io7_A            3 DWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLT-SDPPL   75 (368)
T ss_dssp             HHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGG-CCTTH
T ss_pred             HHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-cccccccccccccccccccccccccccccccccc-CCChH
Confidence            346677 489999987  3  578999999999999764 46776653     0000  010 110 1123444 47999


Q ss_pred             HHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHH
Q 036686          129 WRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIE  207 (508)
Q Consensus       129 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~  207 (508)
                      |+++|+.+ .+.|++..++.+.+.+.+.++.+++.+ .     .+.+|+...+ ..+++++++.+ ||.+.++.  +.+.
T Consensus        76 h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l-~-----~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--~~~~  145 (368)
T 1io7_A           76 HDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI-D-----PREDDIVKKLAVPLPIIVISKI-LGLPIEDK--EKFK  145 (368)
T ss_dssp             HHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC-C-----TTSEEHHHHTTTHHHHHHHHHH-HTCCGGGH--HHHH
T ss_pred             HHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh-h-----cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH--HHHH
Confidence            99999955 789999999999999999999999988 3     2268998866 78999999999 99987542  2222


Q ss_pred             HHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhc
Q 036686          208 SILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFG  287 (508)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  287 (508)
                      +....    ......  .|.       ..++..++.+.+.+++.+.+    +          .    ..   |+++.+++
T Consensus       146 ~~~~~----~~~~~~--~p~-------~~~~~~~~~~~~~~~~~~~i----~----------~----~~---d~l~~ll~  191 (368)
T 1io7_A          146 EWSDL----VAFRLG--KPG-------EIFELGKKYLELIGYVKDHL----N----------S----GT---EVVSRVVN  191 (368)
T ss_dssp             HHGGG----CTTSCC--CTT-------CHHHHHHHHHHHHHHHHHHT----T----------S----SC---HHHHHHHT
T ss_pred             HHHHH----HHhccC--ChH-------HHHHHHHHHHHHHHHHHHHh----C----------C----CC---CHHHHHHh
Confidence            22211    111110  121       11334445555666655554    0          1    11   89999986


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHH
Q 036686          288 LEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVK  367 (508)
Q Consensus       288 ~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~  367 (508)
                      .      .++++++.+++..+++||+|||+++++|++++|++|| +|+++++|  .                 |++|||+
T Consensus       192 ~------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E--~-----------------~l~a~i~  245 (368)
T 1io7_A          192 S------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE--N-----------------LYLKAIE  245 (368)
T ss_dssp             S------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH--T-----------------CHHHHHH
T ss_pred             c------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc--c-----------------hHHHHHH
Confidence            4      5899999999999999999999999999999999999 99999999  1                 6899999


Q ss_pred             hhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccC
Q 036686          368 ETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPF  447 (508)
Q Consensus       368 E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~F  447 (508)
                      |+||++|+++ .++|.+++|++++|+.||||+.|+++.+++||||++|+||++|+|+|+              ...++||
T Consensus       246 E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--------------~~~~~~F  310 (368)
T 1io7_A          246 EALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN--------------PNPHLSF  310 (368)
T ss_dssp             HHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC--------------SCCCCTT
T ss_pred             HHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC--------------CCCCcCC
Confidence            9999999999 578999999999999999999999999999999999999999999993              1358999


Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccceeeeecCceeEEeecC
Q 036686          448 GAGRRICPAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYAFTVVMKNSLKAVILPR  508 (508)
Q Consensus       448 g~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  508 (508)
                      |+|+|.|+|++||++|++++++.|+++|+ +++++   +++  ..+.+++.+.+++|+++||
T Consensus       311 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~---~~~--~~~~~~~~~~~lpv~~~~r  367 (368)
T 1io7_A          311 GSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD---TEK--VPNEVLNGYKRLVVRLKSN  367 (368)
T ss_dssp             CCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE---EEE--CCCSSBCCEEEEEEEEEC-
T ss_pred             CCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC---cee--ccCCcccCCceeEEEeccC
Confidence            99999999999999999999999999996 98875   122  2244566778999999987


No 71 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=2.4e-55  Score=408.33  Aligned_cols=320  Identities=16%  Similarity=0.174  Sum_probs=253.0

Q ss_pred             HHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHHHhHhhhcChh
Q 036686           65 KKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRRNFVTELITPT  144 (508)
Q Consensus        65 ~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~  144 (508)
                      ++||||+++   |  .++|++|+.+++++.++ ..|++++.......    +..++.. .+|+.|+++|+.+ .+.|++.
T Consensus         2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~----~~~~l~~-~~g~~~~~~R~~~-~~~fs~~   69 (343)
T 2rfb_A            2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA----GGISFIT-MDNPEHKEFRDIS-APYFLPS   69 (343)
T ss_dssp             -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-------CCGGGG-CCHHHHHHHHHHH-HHHHSHH
T ss_pred             CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc----ccccccc-CCchHHHHHHHHh-hhhcCHH
Confidence            579999986   3  89999999999999765 46877652211111    2224444 4799999999965 7899999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCccc
Q 036686          145 RVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPD  223 (508)
Q Consensus       145 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (508)
                      .++.+.+.+.+.++.+++.+.        .+|+...+ ..+++++++.+ ||.+.++  .+.+.+....+....      
T Consensus        70 ~l~~~~~~i~~~~~~l~~~l~--------~~d~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~~~~~------  132 (343)
T 2rfb_A           70 KINDYKDFIEETSNDLIKNID--------NKDIISEYAVRLPVNIISKI-LGIPDSD--MPLFKLWSDYIIGNK------  132 (343)
T ss_dssp             HHGGGHHHHHHHHHHHHTTCT--------TSCHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHHHHHHHHTSC------
T ss_pred             HHHHHHHHHHHHHHHHHHhcc--------ccCHHHHHhhhhhHHHHHHH-cCCCHHH--HHHHHHHHHHHhhcc------
Confidence            999999999999999988764        67888755 89999999998 9988753  234444444333211      


Q ss_pred             ccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHH
Q 036686          224 FLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVT  303 (508)
Q Consensus       224 ~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~  303 (508)
                       .|.+.     ..++. ++.+.+.+++.+.+                    ..   | ++.+++...+ +..++++++.+
T Consensus       133 -~p~~~-----~~~~~-~~~~~~~~~~~~~i--------------------~~---d-l~~ll~~~~~-~~~l~~~ei~~  180 (343)
T 2rfb_A          133 -RDENF-----NYVNN-RMVSRLLEIFKSDS--------------------HG---I-INVLAGSSLK-NRKLTMDEKIK  180 (343)
T ss_dssp             -CSSHH-----HHHHH-HHHHHHHHHHHSCC--------------------SS---H-HHHHHTCBCS-SSBCCHHHHHH
T ss_pred             -Ccchh-----hHHHH-HHHHHHHHHHHHHH--------------------hc---c-HHHHHhhhcC-CCCCCHHHHHH
Confidence             13221     11222 33334433333222                    11   7 8888865432 33699999999


Q ss_pred             HHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCCCC-Cccccc
Q 036686          304 LCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPG-HFLLSH  382 (508)
Q Consensus       304 ~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~-~~~~~R  382 (508)
                      ++..+++||+|||+++++|++++|++||++|+++++|+                     +|||+|+||++|++ + .++|
T Consensus       181 ~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~~-~~~R  238 (343)
T 2rfb_A          181 YIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQF-LPHR  238 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBCC-BCCC
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCccccc-ccce
Confidence            99999999999999999999999999999999999995                     79999999999999 8 5789


Q ss_pred             ccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHH
Q 036686          383 AAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGIL  462 (508)
Q Consensus       383 ~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~  462 (508)
                      .+++|++++||.||||+.|+++.+++||||++|+||++|+||||               ..++|||+|+|.|+|++||++
T Consensus       239 ~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~---------------~~~~~FG~G~r~C~G~~lA~~  303 (343)
T 2rfb_A          239 FAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR---------------EMHLAFGIGIHMCLGAPLARL  303 (343)
T ss_dssp             EESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS---------------SCCCTTCCSTTSCTTHHHHHH
T ss_pred             EECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC---------------CCCccCCCCCccCCChHHHHH
Confidence            99999999999999999999999999999999999999999994               148999999999999999999


Q ss_pred             HHHHHHHHHHHhce-eecCCC
Q 036686          463 HINLLIARMVHAYK-WLPVPG  482 (508)
Q Consensus       463 ~~~~~l~~ll~~~~-~~~~~~  482 (508)
                      |++++++.|+++|+ ++++++
T Consensus       304 e~~~~la~ll~~f~~~~~~~~  324 (343)
T 2rfb_A          304 EASIALNDILNHFKRIKIDYK  324 (343)
T ss_dssp             HHHHHHHHHHHHCSCCCBCTT
T ss_pred             HHHHHHHHHHHhCCCceeCCC
Confidence            99999999999996 998874


No 72 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=2.4e-55  Score=411.69  Aligned_cols=353  Identities=15%  Similarity=0.154  Sum_probs=275.7

Q ss_pred             HHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC--Cc-----e-EEeecC-ccceeeCCCChh
Q 036686           58 FIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS--PI-----R-LVFSVG-KCAINSAEYGPL  128 (508)
Q Consensus        58 ~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~--~~-----~-~~~~~~-~~~~~~~~~~~~  128 (508)
                      ..+.+++ +||||+++.  |  .++|++|+.++++|.+. ..|++++...  .+     . ...+.. ..++.+. +|+.
T Consensus         3 ~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg~~   75 (367)
T 3b4x_A            3 DWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-DPPL   75 (367)
T ss_dssp             HHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-CTTH
T ss_pred             HHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC-Cchh
Confidence            3466664 799999886  3  78999999999999765 4677664211  11     1 122210 1244444 7999


Q ss_pred             HHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-HHHHHhhhhhhhcccccchHHHHHHH
Q 036686          129 WRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-RLTICSILICLCFGAKISEERIKHIE  207 (508)
Q Consensus       129 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fg~~~~~~~~~~~~  207 (508)
                      |+++|+.+ .+.|++..++.  +.+.+.++.+++.+.      + .+|+...+ ..+++++++. +||.+ ++  .+.+.
T Consensus        76 h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~------g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~--~~~~~  141 (367)
T 3b4x_A           76 HDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELD------E-EFDVIESFAIPLPILVISK-MLGIN-PD--VKKVK  141 (367)
T ss_dssp             HHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCC------S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC--HHHHH
T ss_pred             HHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhcc------C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc--HHHHH
Confidence            99999955 77999999888  888888888888775      2 38998655 7899999999 79998 43  34455


Q ss_pred             HHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhc
Q 036686          208 SILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFG  287 (508)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  287 (508)
                      .....+.....     ..|.+.       +.. ++.+.+.+++.+.++++++..             ..   |+++.+++
T Consensus       142 ~~~~~~~~~~~-----~~p~~~-------~~~-~~~~~~~~~~~~~i~~r~~~~-------------~~---dll~~ll~  192 (367)
T 3b4x_A          142 DWSDLVALRLG-----RADEIF-------SIG-RKYLELISFSKKELDSRKGKE-------------IV---DLTGKIAN  192 (367)
T ss_dssp             HHHHHHHTTTT-----STTGGG-------CCC-HHHHHHHHHHHHHHHHHTTTC-------------CS---SHHHHHHT
T ss_pred             HHHHHHHhccC-----CChhhH-------HHH-HHHHHHHHHHHHHHHHHhcCC-------------CC---CHHHHHHh
Confidence            55444432211     122211       112 455667777777777665411             11   89999986


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHH
Q 036686          288 LEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVK  367 (508)
Q Consensus       288 ~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~  367 (508)
                      .      .++++++.+++..+++||+|||+++++|++++|++ |++|+++++|++                    +|||+
T Consensus       193 ~------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------------~a~i~  245 (367)
T 3b4x_A          193 S------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------------LKAVE  245 (367)
T ss_dssp             S------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS--------------------HHHHH
T ss_pred             c------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc--------------------hHHHH
Confidence            5      58999999999999999999999999999999999 999999999953                    79999


Q ss_pred             hhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccC
Q 036686          368 ETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPF  447 (508)
Q Consensus       368 E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~F  447 (508)
                      |+||++|+++ .++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||.              ..++||
T Consensus       246 E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~--------------~~~l~F  310 (367)
T 3b4x_A          246 EALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP--------------NPHLSF  310 (367)
T ss_dssp             HHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS--------------CCCCTT
T ss_pred             HHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC--------------CCCcCC
Confidence            9999999999 5789999999999999999999999999999999999999999999983              258999


Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          448 GAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       448 g~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                      |+|+|.|+|++||++|++++++.|+++| +++++++   ++  ..+.+++.+.+++|++++
T Consensus       311 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~--~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          311 GSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK---EK--IDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             CCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE---EE--CCCSSBCSEEEEEEEEEE
T ss_pred             CCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc---cc--cccccccCcceEEEEecC
Confidence            9999999999999999999999999999 6998763   22  224456667789998865


No 73 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=9.7e-55  Score=411.70  Aligned_cols=372  Identities=14%  Similarity=0.169  Sum_probs=283.4

Q ss_pred             chHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHHHH
Q 036686           55 HFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSLRR  134 (508)
Q Consensus        55 ~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~  134 (508)
                      +.+..+.++++ +|||+++..|   .++|++++.+++++.+.  .|+..+....... ...+..++ ...+|+.|+++|+
T Consensus        21 dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~-~~~~~~~l-~~~dg~~h~~~R~   92 (394)
T 2wiy_A           21 NPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGP-WAVASDTA-LGSDPPHHTVLRR   92 (394)
T ss_dssp             CCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGG-GGGGGGSG-GGCCTTHHHHHHH
T ss_pred             CccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Ccccccccccccc-chhccccc-ccCCchHHHHHHH
Confidence            45556777765 4899987543   68999999999999543  4543211000000 00111233 3358999999999


Q ss_pred             HhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHH
Q 036686          135 NFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKDVM  214 (508)
Q Consensus       135 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~  214 (508)
                      . ..+.|++..++.+.+.+.+.++.+++.+..     ++.+|+...+..++.++++..+||.+.++  .+.+.+......
T Consensus        93 ~-~~~~fs~~~~~~~~~~i~~~~~~l~~~~~~-----~~~~d~~~~~~~~~~~vi~~~~~G~~~~~--~~~~~~~~~~~~  164 (394)
T 2wiy_A           93 Q-TNKWFTPKLVDGWVRTTRELVGDLLDGVEA-----GQVIEARRDLAVVPTHVTMARVLQLPEDD--ADAVMEAMFEAM  164 (394)
T ss_dssp             H-HHTTCSHHHHHHHTHHHHHHHHHHHHTCCT-----TCCEEHHHHHTHHHHHHHHHHHHTCCCCC--HHHHHHHHHHHH
T ss_pred             H-HHhccCHHHHHHHHHHHHHHHHHHHHHHhc-----cCCeeHHHHHHhhhHHHHHHHHcCCCHhH--HHHHHHHHHHHH
Confidence            5 578999999999999999999998887752     56799999999999999999999987643  233333332222


Q ss_pred             HhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCC
Q 036686          215 LITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGRE  294 (508)
Q Consensus       215 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  294 (508)
                      ...     ...|..     ....+...+.+.+.+++.+.+++++...        .     .   |+++.+++...+  +
T Consensus       165 ~~~-----~~~p~~-----~~~~~~~~~~~~l~~~~~~~i~~rr~~~--------~-----~---dll~~Ll~~~~~--~  216 (394)
T 2wiy_A          165 LMQ-----SAEPAD-----GDVDRAAVAFGYLSARVAEMLEDKRVNP--------G-----D---GLADSLLDAARA--G  216 (394)
T ss_dssp             GGG-----SSSCCT-----THHHHHHHHHHHHHHHHHHHHHHHHHSC--------C-----S---SHHHHHHHHHHT--T
T ss_pred             Hhc-----cCCccc-----hHHHHHHHHHHHHHHHHHHHHHHhhcCC--------C-----C---cHHHHHHHhhhc--C
Confidence            110     111211     1123444556677778888887776421        1     1   688888765322  3


Q ss_pred             CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCC
Q 036686          295 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHP  374 (508)
Q Consensus       295 ~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p  374 (508)
                      .++++|+.++++.+++||+|||+++++|++++|++||++|+++++|+                  +++++||+|+||++|
T Consensus       217 ~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~LRl~p  278 (394)
T 2wiy_A          217 EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE------------------SARAAIINEMVRMDP  278 (394)
T ss_dssp             SSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHhhCC
Confidence            59999999999999999999999999999999999999999999874                  478999999999999


Q ss_pred             CCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCC
Q 036686          375 PGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRIC  454 (508)
Q Consensus       375 ~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C  454 (508)
                      |++. ++|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+||++.            ..++|||+|+|.|
T Consensus       279 p~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~------------~~~l~FG~G~r~C  345 (394)
T 2wiy_A          279 PQLS-FLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA------------SRNLSFGLGPHSC  345 (394)
T ss_dssp             SBCE-EEEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG------------SCCSTTCCGGGSC
T ss_pred             CccC-eeEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC------------CCccCCCCCCCcC
Confidence            9985 68999999999999999999999999999999999999999999999742            2589999999999


Q ss_pred             CChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccceeeeecCceeEEe
Q 036686          455 PAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYAFTVVMKNSLKAVI  505 (508)
Q Consensus       455 ~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  505 (508)
                      +|++||++|++++++.|+++|+ ++++++.  ++  ..+.+++....++|++
T Consensus       346 ~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~--~~--~~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          346 AGQIISRAEATTVFAVLAERYERIELAEEP--TV--AHNDFARRYRKLPIVL  393 (394)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCSCEEESSCC--EE--CCCSSBCCEEECEEEE
T ss_pred             CcHHHHHHHHHHHHHHHHHhCCCceECCCC--cc--cccccccCcceeeEEe
Confidence            9999999999999999999998 8887532  21  2334556667788876


No 74 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=2.1e-55  Score=419.40  Aligned_cols=369  Identities=17%  Similarity=0.128  Sum_probs=282.6

Q ss_pred             HHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC------CceEEeecCccceeeCCCChhHHHHHHH
Q 036686           62 DLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS------PIRLVFSVGKCAINSAEYGPLWRSLRRN  135 (508)
Q Consensus        62 ~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~w~~~R~~  135 (508)
                      +..++||||+++.+++.. ++|++++.+++++.+..  |.......      ...........++ ...+|+.|+++||.
T Consensus        39 ~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~Rr~  114 (416)
T 3p3o_A           39 PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFL-QSLDGADHRRLRGL  114 (416)
T ss_dssp             HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSG-GGCCHHHHHHHHHT
T ss_pred             HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCcc-ccCCchHHHHHHHH
Confidence            444579999999887666 99999999999996653  32211000      0000000001123 33489999999995


Q ss_pred             hHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHH-HHHHHHhhhhhhhcccccchHHHHHHHHHHHHHH
Q 036686          136 FVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSS-CRLTICSILICLCFGAKISEERIKHIESILKDVM  214 (508)
Q Consensus       136 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~  214 (508)
                      + .+.|++..++.+.+.+.+.++.+++.+ .     .+.+|+... ...+++++++. +||.+.++.  +.+......+.
T Consensus       115 ~-~~~fs~~~l~~~~~~i~~~~~~ll~~l-~-----~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~~--~~~~~~~~~~~  184 (416)
T 3p3o_A          115 A-THPFTPRRITAVQPFVRSTVEQLIDKL-P-----QGDFDFVQHFPHPLPALVMCQ-LLGFPLEDY--DTVGRLSIETN  184 (416)
T ss_dssp             T-CGGGSHHHHHHHHHHHHHHHHHHHHTC-C-----SSSEEHHHHTTTHHHHHHHHH-HHTCCGGGH--HHHHHHHHTTC
T ss_pred             H-HHhhCHHHHHHHHHHHHHHHHHHHHhh-c-----cCCccHHHHHHHHHHHHHHHH-HhCCCHHHH--HHHHHHHHHHH
Confidence            5 689999999999999999999999988 3     334886554 45689999988 589875432  33333333221


Q ss_pred             HhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCCCC
Q 036686          215 LITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGRE  294 (508)
Q Consensus       215 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  294 (508)
                      ...        ...  ......++..++.+.+.+++.+.++++++..             ..   |+++.+++...+.  
T Consensus       185 ~~~--------~~~--~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~-------------~~---dll~~ll~~~~~~--  236 (416)
T 3p3o_A          185 LGL--------ALS--NDQDILVKVEQGLGRMFDYLVAAIEKRKVEP-------------GD---DLTSDIVRAFHDG--  236 (416)
T ss_dssp             GGG--------TTC--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-------------CS---SHHHHHHHHHHTT--
T ss_pred             hhc--------ccc--cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-------------Cc---cHHHHHHHhhccC--
Confidence            111        100  0122345666777888899999998877631             11   7888888764332  


Q ss_pred             CCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcCCC
Q 036686          295 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHP  374 (508)
Q Consensus       295 ~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p  374 (508)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |+++||+|+||++|
T Consensus       237 ~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p  298 (416)
T 3p3o_A          237 VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAPQAVEEVLRWSP  298 (416)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhcc
Confidence            799999999999999999999999999999999999999999999853                  78999999999999


Q ss_pred             CCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCCCC
Q 036686          375 PGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRRIC  454 (508)
Q Consensus       375 ~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C  454 (508)
                      +++..++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||.             ...++|||+|+|.|
T Consensus       299 ~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~-------------~~~~l~FG~G~r~C  365 (416)
T 3p3o_A          299 TLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKR-------------EAPSIAFGGGPHFC  365 (416)
T ss_dssp             SCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCC-------------SSCCCTTCCSTTSC
T ss_pred             ccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCC-------------CCCeecCCCCCccC
Confidence            99777899999999999999999999999999999999999999999999972             23589999999999


Q ss_pred             CChhHHHHHHHHHHHHHHHhce-eecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          455 PAWSLGILHINLLIARMVHAYK-WLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       455 ~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                      +|++||++|++++++.|+++|+ ++++++.    ....+..++....++|+++|
T Consensus       366 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~----~~~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          366 LGTALARLELTEAVAALATRLDPPQIAGEI----TWRHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHSCCEEECSCC----EECCCTTCCCEEECEEEESC
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCccccCCCC----ceecCCCccCcceeeEEEec
Confidence            9999999999999999999994 7777532    22233455566778888875


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=4.7e-53  Score=401.94  Aligned_cols=387  Identities=17%  Similarity=0.158  Sum_probs=273.2

Q ss_pred             CCCCccccc---hhhhhhhcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCC--CceE
Q 036686           37 PRGWPLVGN---LVQVILQRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDS--PIRL  111 (508)
Q Consensus        37 P~~~p~~G~---~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~--~~~~  111 (508)
                      +.++|.+|.   ...+..   +.+..+.++++ +|||+++  ++...++|+++++++++|.+. ..|+......  ....
T Consensus        17 ~~~~P~~~~dp~~~~~~~---dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~   89 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYFA---DPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKK   89 (412)
T ss_dssp             STTSCEECCCTTSHHHHH---SCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTT
T ss_pred             CCCCCccCCCCCCHHHHh---CcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccc
Confidence            346787772   233433   34555777764 6999865  666789999999999999554 3454322111  0000


Q ss_pred             EeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchh-hHHHHHHHHhhhh
Q 036686          112 VFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEV-MSSCRLTICSILI  190 (508)
Q Consensus       112 ~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl-~~~~~~~~~~~~~  190 (508)
                      .............||+.|+++|+. +.+.|++..++.+.+.+.+.++.+++.+...    ++.+|+ .++...+..++++
T Consensus        90 ~~~~~~~~~~~~~Dg~~H~r~R~~-~~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~----~~~~D~v~~~~~~~~~~~i~  164 (412)
T 4dnj_A           90 EKPWRPPSLILEADPPAHTRTRAV-LSKVLSPATMKRLRDGFAAAADAKIDELLAR----GGNIDAIADLAEAYPLSVFP  164 (412)
T ss_dssp             SCCSSCCCTTTTCCTTHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT----TSEEETCCCCCCHHHHHHHH
T ss_pred             cccccCCCccccCChHHHHHHHhh-cccccCHHHHHHhhHHHHHHHHHHHHhhhcc----CCCceeHHHHHhhhhHhHHH
Confidence            000111123334589999999995 5789999999999999999999999988653    445664 4455556667776


Q ss_pred             hhhccccc-chHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCC
Q 036686          191 CLCFGAKI-SEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNS  269 (508)
Q Consensus       191 ~~~fg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  269 (508)
                      .+ +|.+. +.+.   +......+......     ...       ...........+..    .+.+..+...       
T Consensus       165 ~l-~g~~~~~~~~---~~~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~~~----~~~~~~~~~~-------  217 (412)
T 4dnj_A          165 DA-MGLKQEGREN---LLPYAGLVFNAFGP-----PNE-------LRQSAIERSAPHQA----YVAEQCQRPN-------  217 (412)
T ss_dssp             HH-HTCCSTTGGG---HHHHHHHHHHHTSC-----SSH-------HHHHHHHTCHHHHH----HHHHHTSGGG-------
T ss_pred             HH-cCCchhhhhh---hhhhhhcccccccc-----cHH-------HHHHHHHHHHHHHH----HHHHHHHhhc-------
Confidence            65 45443 3222   22222222222211     000       01111111112222    2222222110       


Q ss_pred             CCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCC
Q 036686          270 ESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG  349 (508)
Q Consensus       270 ~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~  349 (508)
                          ..+   +.+..++....+ +..++++|+.+++..+++||+|||+++++|++++|++||++|+++++|         
T Consensus       218 ----~~~---~~~~~l~~~~~~-~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~---------  280 (412)
T 4dnj_A          218 ----LAP---GGFGACIHAFSD-TGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD---------  280 (412)
T ss_dssp             ----SCT---TSHHHHHHHTTT-TTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHC---------
T ss_pred             ----ccc---ccchhhhHhhhh-ccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhC---------
Confidence                011   334444443332 347999999999999999999999999999999999999999999975         


Q ss_pred             CCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCC
Q 036686          350 LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEG  429 (508)
Q Consensus       350 ~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~  429 (508)
                               ..++.++++|++|++|+++. +.|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||.  
T Consensus       281 ---------~~~~~~~~eE~lR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~--  348 (412)
T 4dnj_A          281 ---------PSLARNAFEEAVRFESPVQT-FFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT--  348 (412)
T ss_dssp             ---------GGGHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC--
T ss_pred             ---------ccccccccceeeeecCCccc-ccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC--
Confidence                     35788999999999999987 689999999999999999999999999999999999999999999962  


Q ss_pred             CCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEeec
Q 036686          430 DGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVILP  507 (508)
Q Consensus       430 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  507 (508)
                                  ..|+|||+|+|.|+|++||++|++++++.|+++| +++++++    .....+.++++...++|+++|
T Consensus       349 ------------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~----~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          349 ------------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP----LKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             ------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC----CEEEECSSBEEEEECEEEEEE
T ss_pred             ------------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC----CeeecCCCccCCcceeEEEEe
Confidence                        3589999999999999999999999999999999 8888753    233455677888899999987


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=2.1e-48  Score=368.84  Aligned_cols=376  Identities=13%  Similarity=0.087  Sum_probs=271.1

Q ss_pred             CchHHHHHHHHHHhC-CeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCceEEeecCccceeeCCCChhHHHH
Q 036686           54 RHFIFIVRDLRKKYG-PIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPIRLVFSVGKCAINSAEYGPLWRSL  132 (508)
Q Consensus        54 ~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~  132 (508)
                      .+++..+.++++..+ +++... .+...++|++++++++++.+. ..|+..........  +..........|++.|+++
T Consensus        37 ~~~~~~~~~lr~~~~~~~~~~~-~~gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~--~~~~~~~~~~~D~p~H~r~  112 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPDLIWTP-FTGGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEA--GEKAQMVPTKMDPPEHTPY  112 (417)
T ss_dssp             GCHHHHHHHHSCTTCCSEEEES-STTSEEEECSHHHHHHHHTCT-TTEESSCCSSSTTS--SCSSCTTTTTCCTTTHHHH
T ss_pred             cChHHHHHHHHhhCCCCEEecC-CCCCEEEECCHHHHHHHHcCc-hhccCCCccccccc--ccccccCcccCCcHHHHHH
Confidence            357777888876643 344332 333578999999999999553 46765432211110  1111122334489999999


Q ss_pred             HHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHhhhhhhhcccccchHHHHHHHHHHHH
Q 036686          133 RRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSCRLTICSILICLCFGAKISEERIKHIESILKD  212 (508)
Q Consensus       133 R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~  212 (508)
                      ||. +.+.|++..++.+.+.+.+.++++++.+..     .+.+|+...+.......+...++|.+..+  ...+.+....
T Consensus       113 Rrl-l~~~Fs~~~l~~~~~~i~~~~~~lld~l~~-----~g~~D~v~~~a~~l~~~vi~~llg~~~~d--~~~~~~~~~~  184 (417)
T 4dxy_A          113 RKA-LDKGLNLAKIRKVEDKVREVASSLIDSFAA-----RGECDFAAEYAELFPVHVFMALADLPLED--IPVLSEYARQ  184 (417)
T ss_dssp             HHH-HHHHHCHHHHHTTHHHHHHHHHHHHHHHHT-----TSEEEHHHHTTTTHHHHHHHHHTTCCGGG--HHHHHHHHHH
T ss_pred             HHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHhhh-----cCCeeeHHHHHhhhHHHHHHHHcCCCHHH--HHHHHhhhhh
Confidence            995 578999999999999999999999999865     44677655554433333444557876433  3444444443


Q ss_pred             HHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhCCCCCCCCccccccchhhHHhhhcCCCCC
Q 036686          213 VMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTG  292 (508)
Q Consensus       213 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~  292 (508)
                      +....     ...|      .........+...+.+++.+.+++++...             ..   ++++.++....+ 
T Consensus       185 ~~~~~-----~~~~------~~~~~~~~~~~~~~~~~~~~li~~rr~~~-------------~d---dl~s~L~~~~~~-  236 (417)
T 4dxy_A          185 MTRPE-----GNTP------EEMATDLEAGNNGFYAYVDPIIRARVGGD-------------GD---DLITLMVNSEIN-  236 (417)
T ss_dssp             HHSCC-----CSSH------HHHHHHHHHHHHHHHHHHHHHHHHHTTCC-------------CC---SHHHHHHTCEET-
T ss_pred             hcccc-----ccCh------HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------cc---chhhhhcccccc-
Confidence            32111     0111      22234455666777778888777665421             11   788888876433 


Q ss_pred             CCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCcccccCCchHHHHHHhhhcC
Q 036686          293 REQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRR  372 (508)
Q Consensus       293 ~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl  372 (508)
                      +..++++++.+++..+++||+|||+++++|++++|++||++++++++|...+                   ....|.+|+
T Consensus       237 ~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~-------------------~~avee~~~  297 (417)
T 4dxy_A          237 GERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL-------------------MRGAEEMFR  297 (417)
T ss_dssp             TEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH-------------------HHTHHHHHH
T ss_pred             CCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc-------------------ccceeeeec
Confidence            3379999999999999999999999999999999999999999999986654                   222344444


Q ss_pred             CCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCCCCcccCCCCCCccccCCCCCccccCCCCCC
Q 036686          373 HPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFRPERFLEGDGVDVDVTGTRGVKMVPFGAGRR  452 (508)
Q Consensus       373 ~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r  452 (508)
                      +++.+. +.|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+|+              ...|+|||+|+|
T Consensus       298 ~~~~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~--------------~~~~l~FG~G~r  362 (417)
T 4dxy_A          298 RFPVVS-EARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR--------------SISHSTFGGGPH  362 (417)
T ss_dssp             HSCCBE-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS--------------CCCCCTTCCGGG
T ss_pred             cccccc-cccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC--------------CCCCCCcCCCcc
Confidence            555444 57999999999999999999999999999999999999999999992              346899999999


Q ss_pred             CCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCceeEEee
Q 036686          453 ICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSLKAVIL  506 (508)
Q Consensus       453 ~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  506 (508)
                      .|+|++||++|++++++.|+++| +++++++..   ....+.+++....++|++-
T Consensus       363 ~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~---~~~~~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          363 RCAGMHLARMEVIVTLEEWLKRIPEFSFKEGET---PIYHSGIVAAVENVPLVWP  414 (417)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCC---CEEECSSBCEEECCEEECC
T ss_pred             cCccHHHHHHHHHHHHHHHHHhCCCceeCCCCC---eeecCCcccCceeeeEEee
Confidence            99999999999999999999999 999886543   2233445555667888763


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1e-46  Score=348.74  Aligned_cols=336  Identities=15%  Similarity=0.132  Sum_probs=221.8

Q ss_pred             CCCC-CCCCccccchhhhhh--hcCchHHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhcCCCcCCCCCCCCc
Q 036686           33 LPPG-PRGWPLVGNLVQVIL--QRRHFIFIVRDLRKKYGPIFTMQMGQRTVVIVTSSQLIHEALVQRGPEFASRPPDSPI  109 (508)
Q Consensus        33 ~ppg-P~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~  109 (508)
                      .||| +.+||++|+.+.+..  ...+.+..+.+++++  ||+++.   .+.++|++++.+++++.+  ..|++.+.....
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~  107 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPE  107 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCH
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCcccccc
Confidence            4666 446899998766432  233667778888865  998763   468999999999999966  357654321100


Q ss_pred             e------EEeecCccceeeCCCChhHHHHHHHhHhhhcChhhhhhhhhHHHHHHHHHHHHHHHhhccCCccchhhHHH-H
Q 036686          110 R------LVFSVGKCAINSAEYGPLWRSLRRNFVTELITPTRVKQCSWIRTWAMESHMKRLNSEAFDNDLFVEVMSSC-R  182 (508)
Q Consensus       110 ~------~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~vdl~~~~-~  182 (508)
                      .      .....+ .++.. .+|+.|        .+.|+     . .+.+++.++++++.+.       +.+|+...+ .
T Consensus       108 ~~~~~~~~~~~~~-~~l~~-~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~-------g~~Dl~~~~a~  164 (381)
T 2yjn_B          108 WMRAAGAPPAEWA-QPFRD-VHAASW--------EGEVP-----D-VGELAESFAGLLPGAG-------ARLDLVGDFAW  164 (381)
T ss_dssp             HHHHHTCCHHHHT-HHHHH-HHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC-------------CCCCCCT
T ss_pred             cccccccccchhh-hhhhh-CCchhh--------hhccC-----C-hHHHHHHHHHHHHhcc-------CcchHHHHHHH
Confidence            0      000011 12222 256666        35666     2 6667777777777764       257888655 6


Q ss_pred             HHHHhhhhhhhcccccchHHHHHHHHHHHHHHHhcCCCcccccccchhhhHhHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 036686          183 LTICSILICLCFGAKISEERIKHIESILKDVMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVE  262 (508)
Q Consensus       183 ~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (508)
                      .+++++++.+ ||.+.++.      +....+....     . .+ +.   .....+.                  .    
T Consensus       165 ~l~~~vi~~l-~G~~~~~~------~~~~~~~~~~-----~-~~-~~---~~~~~~~------------------~----  205 (381)
T 2yjn_B          165 QVPVQGMTAV-LGAAGVLR------GAAWDARVSL-----D-AQ-LS---PQQLAVT------------------E----  205 (381)
T ss_dssp             HHHHHHHHTC------CCH------HHHHHHTTHH-----H-HT-TS---CCCHHHH------------------H----
T ss_pred             HHHHHHHHHH-cCCCHHHH------HHHHHHHHhc-----c-CC-CC---HHHHHHH------------------H----
Confidence            9999999995 99887543      1111111000     0 00 00   0000000                  0    


Q ss_pred             hCCCCCCCCccccccchhhHHhhhcCCCCCCCCCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHhhChHHHHHHHHHHH
Q 036686          263 KGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIV  342 (508)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~  342 (508)
                                       +.++.++.               ++++.+++||+|||+++++|++++|++||++|+++++|++
T Consensus       206 -----------------~~~~~l~~---------------~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~  253 (381)
T 2yjn_B          206 -----------------AAVAALPA---------------DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA  253 (381)
T ss_dssp             -----------------HHHHHCC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
T ss_pred             -----------------HHHHHHHH---------------HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH
Confidence                             11111111               6788899999999999999999999999999999998842


Q ss_pred             HHhcCCCCCCcccccCCchHHHHHHhhhcCCCCCCcccccccccccccCCeeeCCCCEEEEcccccccCCCCCCCCCCCC
Q 036686          343 AAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYTAWLTEDPDMWSDPGEFR  422 (508)
Q Consensus       343 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  422 (508)
                                        |+++||+|+||++|+++. +.|.+++|++++|+.||||+.|+++.+++|+||++|+||++||
T Consensus       254 ------------------~l~~~i~E~LR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~  314 (381)
T 2yjn_B          254 ------------------AAQRTVAEVLRLHPALHL-ERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLD  314 (381)
T ss_dssp             --------------------HHHHHHHHHHSCSCSE-EEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCC
T ss_pred             ------------------HHHHHhCeeeeecCCCcc-eeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccC
Confidence                              899999999999999996 6799999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCccccCCCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCcccceeeeecCce
Q 036686          423 PERFLEGDGVDVDVTGTRGVKMVPFGAGRRICPAWSLGILHINLLIARMVHAY-KWLPVPGAPPDPTETYAFTVVMKNSL  501 (508)
Q Consensus       423 p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (508)
                      |+||++             ..++|||+| |.|+|++||++|++++++.|+++| +++++++. .  ....+.+++....+
T Consensus       315 p~R~~~-------------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~-~--~~~~~~~~r~~~~L  377 (381)
T 2yjn_B          315 VDRPDA-------------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV-V--RRRRSPVLRGTNRC  377 (381)
T ss_dssp             SSCSCC-------------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC-E--ECTTCSSSCCEEEC
T ss_pred             CCCCCC-------------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC-c--ccccCcccCCCccc
Confidence            999964             359999999 999999999999999999999999 99987653 1  22334556666667


Q ss_pred             eEEe
Q 036686          502 KAVI  505 (508)
Q Consensus       502 ~v~~  505 (508)
                      +|++
T Consensus       378 pV~l  381 (381)
T 2yjn_B          378 PVEL  381 (381)
T ss_dssp             CCC-
T ss_pred             eeeC
Confidence            6653


No 78 
>2e2s_A Agelenin; cystine knot, presynaptic calcium channel inhibitor, toxin; NMR {Allagelena opulenta}
Probab=41.90  E-value=16  Score=19.17  Aligned_cols=15  Identities=20%  Similarity=0.386  Sum_probs=12.3

Q ss_pred             CccccCCCCCCCCCC
Q 036686          442 VKMVPFGAGRRICPA  456 (508)
Q Consensus       442 ~~~~~Fg~G~r~C~G  456 (508)
                      ..|-.+-.|||-|.|
T Consensus         7 n~fCn~~sGPrCCsg   21 (36)
T 2e2s_A            7 NRFCNALSGPRCCSG   21 (36)
T ss_dssp             TSCCCSSSSCCBCTT
T ss_pred             CCCcccccCCcccCC
Confidence            456777899999998


No 79 
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=40.92  E-value=58  Score=22.70  Aligned_cols=37  Identities=14%  Similarity=0.134  Sum_probs=29.8

Q ss_pred             HHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHH
Q 036686           58 FIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALV   94 (508)
Q Consensus        58 ~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~   94 (508)
                      .-+.++...||.|.--|+ -..-.+++.+|+.+++++.
T Consensus        30 ~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~   67 (100)
T 1whv_A           30 SDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN   67 (100)
T ss_dssp             HHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred             HHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence            347888899998776677 4567788899999999886


No 80 
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=40.67  E-value=63  Score=21.73  Aligned_cols=54  Identities=9%  Similarity=0.095  Sum_probs=35.6

Q ss_pred             CCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcC----CeeEEEeCCHHHHHHH
Q 036686           34 PPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMG----QRTVVIVTSSQLIHEA   92 (508)
Q Consensus        34 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~vvv~~p~~~~~i   92 (508)
                      ++-|...-++|++..-.     -.+.+.++..+||+|..+.+.    |--+|-..+++.++.+
T Consensus         7 ~~~~~~~l~V~~Lp~~~-----te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~   64 (89)
T 3d2w_A            7 HHHHGSKVFVGRCTEDM-----TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL   64 (89)
T ss_dssp             ----CCEEEEESCCTTC-----CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCCC-----CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence            33344456778765432     223478888999999999875    5667778899988753


No 81 
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.33  E-value=86  Score=21.87  Aligned_cols=53  Identities=11%  Similarity=0.134  Sum_probs=36.2

Q ss_pred             CccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcC--------CeeEEEeCCHHHHHHHHHhcC
Q 036686           40 WPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMG--------QRTVVIVTSSQLIHEALVQRG   97 (508)
Q Consensus        40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~vvv~~p~~~~~il~~~~   97 (508)
                      --++|++..-.     -.+.+.++..+||+|..+.+.        |--+|...+++.++..+..++
T Consensus        13 ~lfV~~Lp~~~-----te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~   73 (103)
T 1s79_A           13 SVYIKGFPTDA-----TLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPG   73 (103)
T ss_dssp             CEEEECCCTTC-----CHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSC
T ss_pred             EEEEECCCCCC-----CHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCC
Confidence            34567654421     233478888999999888763        456677889999999885433


No 82 
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=37.72  E-value=51  Score=18.98  Aligned_cols=7  Identities=0%  Similarity=-0.145  Sum_probs=2.7

Q ss_pred             HHHHhcC
Q 036686           20 WRYSSTT   26 (508)
Q Consensus        20 ~~~~~~~   26 (508)
                      +++++++
T Consensus        32 ~~~~RRr   38 (44)
T 2ks1_B           32 GLFMRRR   38 (44)
T ss_dssp             HHHHHTT
T ss_pred             HHHhhhh
Confidence            3343333


No 83 
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=35.27  E-value=58  Score=18.72  Aligned_cols=7  Identities=14%  Similarity=0.045  Sum_probs=2.6

Q ss_pred             HHHHhcC
Q 036686           20 WRYSSTT   26 (508)
Q Consensus        20 ~~~~~~~   26 (508)
                      +++++++
T Consensus        31 ~~~~RRR   37 (44)
T 2l2t_A           31 AVYVRRK   37 (44)
T ss_dssp             HHHHHTT
T ss_pred             HHHhhhh
Confidence            3333333


No 84 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.21  E-value=1.2e+02  Score=21.01  Aligned_cols=61  Identities=13%  Similarity=0.127  Sum_probs=41.4

Q ss_pred             ccccchhhhhhhcCchHHHHHHHHHHhC-CeEEEEcCCeeEEEeCCHHHHHHHHHh-cCCCcCCC
Q 036686           41 PLVGNLVQVILQRRHFIFIVRDLRKKYG-PIFTMQMGQRTVVIVTSSQLIHEALVQ-RGPEFASR  103 (508)
Q Consensus        41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~~~~il~~-~~~~~~~~  103 (508)
                      -+++|+..-.. .......+.++..+|| +|..+ .+|.-+|...+.+.++..+.+ ++..+-.+
T Consensus        12 lYV~NL~~~~~-~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr   74 (96)
T 2diu_A           12 LYVYNLPANKD-GKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGN   74 (96)
T ss_dssp             EEEESCCTTSC-HHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSS
T ss_pred             EEEeCCCCcCC-HHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCc
Confidence            45787755322 2234445788999995 99888 568999999999998877643 44444443


No 85 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=31.91  E-value=40  Score=15.82  Aligned_cols=12  Identities=33%  Similarity=0.542  Sum_probs=9.9

Q ss_pred             HHHHHHHHHHHH
Q 036686          332 EIQEKLYKEIVA  343 (508)
Q Consensus       332 ~~~~~lr~Ei~~  343 (508)
                      .+|.++|.|+..
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            578999999876


No 86 
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=31.12  E-value=95  Score=19.61  Aligned_cols=40  Identities=5%  Similarity=0.164  Sum_probs=29.2

Q ss_pred             HHHHHHHHHhCCeEEEEcC---------CeeEEEeCCHHHHHHHHHhcC
Q 036686           58 FIVRDLRKKYGPIFTMQMG---------QRTVVIVTSSQLIHEALVQRG   97 (508)
Q Consensus        58 ~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~~~~il~~~~   97 (508)
                      +.+.++..+||+|..+.+.         |.-+|-..+++.++..+...+
T Consensus        14 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~   62 (75)
T 1iqt_A           14 EKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY   62 (75)
T ss_dssp             HHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred             HHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence            3478888899999888763         234566788998888885433


No 87 
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=30.22  E-value=68  Score=23.06  Aligned_cols=68  Identities=16%  Similarity=0.058  Sum_probs=40.3

Q ss_pred             CCCCCCCccccchhhhhh--hc---CchHHHHHHHHHHhCCeEEEEcC-----CeeEEEeCCHHHHHHHHHh-cCCCcC
Q 036686           34 PPGPRGWPLVGNLVQVIL--QR---RHFIFIVRDLRKKYGPIFTMQMG-----QRTVVIVTSSQLIHEALVQ-RGPEFA  101 (508)
Q Consensus        34 ppgP~~~p~~G~~~~~~~--~~---~~~~~~~~~~~~~yG~v~~~~~~-----~~~~vvv~~p~~~~~il~~-~~~~~~  101 (508)
                      +|.|..+-.+.|......  +.   ..+.+-+.+...+||.|..+.+.     |.-+|-..+++.++..... ++..|.
T Consensus         3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~   81 (114)
T 3s6e_A            3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA   81 (114)
T ss_dssp             CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEET
T ss_pred             CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEEC
Confidence            566666666666554321  11   12334466777899999888763     4456666788777665533 444443


No 88 
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=28.54  E-value=1.5e+02  Score=20.76  Aligned_cols=56  Identities=25%  Similarity=0.274  Sum_probs=38.5

Q ss_pred             CCCCCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcC------CeeEEEeCCHHHHHHHHH
Q 036686           34 PPGPRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMG------QRTVVIVTSSQLIHEALV   94 (508)
Q Consensus        34 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~vvv~~p~~~~~il~   94 (508)
                      ||.|...-++|++..-.     -...+.++..+||+|..+.+.      |.-+|-..+++.+...+.
T Consensus         4 ~~~~~~~l~V~nlp~~~-----t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~   65 (115)
T 3lqv_A            4 PPEVNRILYIRNLPYKI-----TAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD   65 (115)
T ss_dssp             CTTCCSEEEEESCCTTC-----CHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence            45555556778765422     223478888999999888761      356777888888887775


No 89 
>1nrj_A Signal recognition particle receptor alpha subunit homolog; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: d.110.4.4
Probab=27.64  E-value=18  Score=26.98  Aligned_cols=22  Identities=18%  Similarity=0.385  Sum_probs=20.9

Q ss_pred             CCCCChhHHHHHHHHHHHHHHH
Q 036686          452 RICPAWSLGILHINLLIARMVH  473 (508)
Q Consensus       452 r~C~G~~~A~~~~~~~l~~ll~  473 (508)
                      .+|.|++||+..+-.++++|+.
T Consensus        18 yn~l~kKf~e~qiN~fIS~Lit   39 (158)
T 1nrj_A           18 YNCLGKKFSEIQINSFISQLIT   39 (158)
T ss_dssp             EETTSCCCCHHHHHHHHHHHHH
T ss_pred             ecccCcchHHHHHHHHHHHHhc
Confidence            4799999999999999999998


No 90 
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.63  E-value=1.4e+02  Score=20.40  Aligned_cols=44  Identities=14%  Similarity=0.178  Sum_probs=31.8

Q ss_pred             hHHHHHHHHHHhCCeEEEEc-CCeeEEEeCCHHHHHHHHHhcCCC
Q 036686           56 FIFIVRDLRKKYGPIFTMQM-GQRTVVIVTSSQLIHEALVQRGPE   99 (508)
Q Consensus        56 ~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~~~~il~~~~~~   99 (508)
                      +...+.+....||.|..+++ .++-+|...|.+.+...+.-++..
T Consensus        28 l~~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mnG~~   72 (91)
T 2dnr_A           28 LIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKE   72 (91)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGTTCE
T ss_pred             HHHHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcCCeE
Confidence            44456777778999999987 567777788888888777544433


No 91 
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=22.97  E-value=1.5e+02  Score=18.65  Aligned_cols=40  Identities=10%  Similarity=0.037  Sum_probs=28.6

Q ss_pred             HHHHHHHHHhCCeEEEEcC---------CeeEEEeCCHHHHHHHHHhcC
Q 036686           58 FIVRDLRKKYGPIFTMQMG---------QRTVVIVTSSQLIHEALVQRG   97 (508)
Q Consensus        58 ~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~~~~il~~~~   97 (508)
                      +.+.++..+||+|..+.+.         |--+|-..+++.++..+..++
T Consensus        14 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~   62 (75)
T 2mss_A           14 EDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHF   62 (75)
T ss_dssp             HHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSC
T ss_pred             HHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCC
Confidence            3477888899999888763         234566778999888874333


No 92 
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=22.13  E-value=1.9e+02  Score=20.78  Aligned_cols=66  Identities=17%  Similarity=0.115  Sum_probs=38.8

Q ss_pred             CCCCccccchhhhhhhcCchHHHHHHHHHHhCCeEEEEcC-------------CeeEEEeCCHHHHHHHHHh-cCCCcCC
Q 036686           37 PRGWPLVGNLVQVILQRRHFIFIVRDLRKKYGPIFTMQMG-------------QRTVVIVTSSQLIHEALVQ-RGPEFAS  102 (508)
Q Consensus        37 P~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------------~~~~vvv~~p~~~~~il~~-~~~~~~~  102 (508)
                      |..+-++.|...-.....+..+-+.+...+||+|..+.+.             |.-+|-..+++.+...... ++..|..
T Consensus        19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~G   98 (118)
T 3ue2_A           19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAG   98 (118)
T ss_dssp             SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence            3445566766443211234666788888999999887752             2234556678776665533 4444433


No 93 
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=20.99  E-value=1.9e+02  Score=19.91  Aligned_cols=56  Identities=18%  Similarity=0.131  Sum_probs=36.5

Q ss_pred             Cccccchhhhhhhc-CchHHHHHHHHHHhCCeEEEEcC-------CeeEEEeCCHHHHHHHHHh
Q 036686           40 WPLVGNLVQVILQR-RHFIFIVRDLRKKYGPIFTMQMG-------QRTVVIVTSSQLIHEALVQ   95 (508)
Q Consensus        40 ~p~~G~~~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~-------~~~~vvv~~p~~~~~il~~   95 (508)
                      .-++|++..-.... ......+.++..+||+|..+.+.       |.-+|-..+++.++..+..
T Consensus        17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~   80 (105)
T 2nlw_A           17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   80 (105)
T ss_dssp             EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred             EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence            35677765421100 00345588889999999998875       4556777788888777653


Done!