BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036687
(432 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 2)
Length = 439
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 203/431 (47%), Gaps = 50/431 (11%)
Query: 23 LISPSTPTPNHSLYLSNLDDQKFLRFSIKYLYLYKKSISLDF-----LKYSLSKVLVEYY 77
++ P+ TP +L+ SN+D F +Y Y+ + S +F LK +LS+ LV +Y
Sbjct: 15 MVRPAQETPGRNLWNSNVD-LVVPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFY 73
Query: 78 PLAGRLRTSSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPNRSWRKLLYRVE-A 136
P+AGRL+ ++D +++++CNGEG +F A D +DF + P R+L+ V+ +
Sbjct: 74 PMAGRLK--RDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFA--PTLELRRLIPAVDYS 129
Query: 137 HSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHVTTKPNLDPPISPF 196
LV+QVT +CGG+ L + H DG F+++W+ + LD + PF
Sbjct: 130 QGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMAR--GLDVTLPPF 187
Query: 197 HTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQAQPLVPASLTF--TPSQIL 254
R +L+ R+PPQ F H +E + L P AS + T I
Sbjct: 188 IDRTLLRARDPPQPQFQH-------------IEYQPPPALAVSPQTAASDSVPETAVSIF 234
Query: 255 HLKRQCVPSLKC-----------TTFEALASHTWRSWVRSLDLLPDSLNVKLLFSVNVRK 303
L R+ + +LK +++E LA H WR ++ L D KL + + R
Sbjct: 235 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQ-GTKLYIATDGRA 293
Query: 304 KLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTIKLVQQAKASLTDDYVRSMVDLLE- 362
+L P +P GY+GN A DL +++ + A A + +DY+RS +D LE
Sbjct: 294 RLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLEL 353
Query: 363 -------DKSYKTDLSSSLVISQWSKLGLEDLDFGEGKPMHMGP--VTSDIYCLFLPVTG 413
+ T +L I+ W +L + D DFG G+P+ MGP + + LP
Sbjct: 354 QPDLKALVRGAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPT 413
Query: 414 DLNSTRVLVSM 424
+ S V +S+
Sbjct: 414 NDGSMSVAISL 424
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora
pdb|4G0B|B Chain B, Structure Of Native Hct From Coffea Canephora
Length = 436
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 203/431 (47%), Gaps = 50/431 (11%)
Query: 23 LISPSTPTPNHSLYLSNLDDQKFLRFSIKYLYLYKKSISLDF-----LKYSLSKVLVEYY 77
++ P+ TP +L+ SN+D F +Y Y+ + S +F LK +LS+ LV +Y
Sbjct: 12 MVRPAQETPGRNLWNSNVD-LVVPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFY 70
Query: 78 PLAGRLRTSSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPNRSWRKLLYRVE-A 136
P+AGRL+ ++D +++++CNGEG +F A D +DF + P R+L+ V+ +
Sbjct: 71 PMAGRLK--RDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFA--PTLELRRLIPAVDYS 126
Query: 137 HSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHVTTKPNLDPPISPF 196
LV+QVT +CGG+ L + H DG F+++W+ + LD + PF
Sbjct: 127 QGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMAR--GLDVTLPPF 184
Query: 197 HTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQAQPLVPASLTF--TPSQIL 254
R +L+ R+PPQ F H +E + L+ P S + T I
Sbjct: 185 IDRTLLRARDPPQPQFQH-------------IEYQPPPALKVSPQTAKSDSVPETAVSIF 231
Query: 255 HLKRQCVPSLKC-----------TTFEALASHTWRSWVRSLDLLPDSLNVKLLFSVNVRK 303
L R+ + +LK +++E LA H WR ++ L D KL + + R
Sbjct: 232 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQ-GTKLYIATDGRA 290
Query: 304 KLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTIKLVQQAKASLTDDYVRSMVDLLE- 362
+L P +P GY+GN A DL +++ + A A + +DY+RS +D LE
Sbjct: 291 RLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLEL 350
Query: 363 -------DKSYKTDLSSSLVISQWSKLGLEDLDFGEGKPMHMGP--VTSDIYCLFLPVTG 413
+ T +L I+ W +L + D DFG G+P+ MGP + + LP
Sbjct: 351 QPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPT 410
Query: 414 DLNSTRVLVSM 424
+ S V +S+
Sbjct: 411 NDGSMSVAISL 421
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
pdb|4G22|B Chain B, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
Length = 439
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 202/431 (46%), Gaps = 50/431 (11%)
Query: 23 LISPSTPTPNHSLYLSNLDDQKFLRFSIKYLYLYKKSISLDF-----LKYSLSKVLVEYY 77
++ P+ TP +L+ SN+D F +Y Y+ + S +F LK +LS+ LV +Y
Sbjct: 15 MVRPAQETPGRNLWNSNVD-LVVPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFY 73
Query: 78 PLAGRLRTSSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPNRSWRKLLYRVE-A 136
P+AGRL+ ++D +++++CNGEG +F A D +DF + P R+L+ V+ +
Sbjct: 74 PMAGRLK--RDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFA--PTLELRRLIPAVDYS 129
Query: 137 HSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHVTTKPNLDPPISPF 196
LV+QVT + GG+ L + H DG F+++W+ + LD + PF
Sbjct: 130 QGISSYALLVLQVTYFKXGGVSLGVGMRHHAADGFSGLHFINSWSDMAR--GLDVTLPPF 187
Query: 197 HTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQAQPLVPASLTF--TPSQIL 254
R +L+ R+PPQ F H +E + L P AS + T I
Sbjct: 188 IDRTLLRARDPPQPQFQH-------------IEYQPPPALAVSPQTAASDSVPETAVSIF 234
Query: 255 HLKRQCVPSLKC-----------TTFEALASHTWRSWVRSLDLLPDSLNVKLLFSVNVRK 303
L R+ + +LK +++E LA H WR ++ L D KL + + R
Sbjct: 235 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQ-GTKLYIATDGRA 293
Query: 304 KLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTIKLVQQAKASLTDDYVRSMVDLLE- 362
+L P +P GY+GN A DL +++ + A A + +DY+RS +D LE
Sbjct: 294 RLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLEL 353
Query: 363 -------DKSYKTDLSSSLVISQWSKLGLEDLDFGEGKPMHMGP--VTSDIYCLFLPVTG 413
+ T +L I+ W +L + D DFG G+P+ MGP + + LP
Sbjct: 354 QPDLKALVRGAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPT 413
Query: 414 DLNSTRVLVSM 424
+ S V +S+
Sbjct: 414 NDGSMSVAISL 424
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase
pdb|2BGH|B Chain B, Crystal Structure Of Vinorine Synthase
Length = 421
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 156/397 (39%), Gaps = 63/397 (15%)
Query: 23 LISPSTPTPNH-SLYLSNLDDQKFLRFSIKYLYLYKKSISLDF--------LKYSLSKVL 73
LI PS+PTP Y + DQ L I ++ Y + + LK SLSKVL
Sbjct: 12 LILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVL 71
Query: 74 VEYYPLAGRLRTSSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPNRSWRKLLYR 133
+YPLAGR+ +S VDCN G F A + +Q + + + L
Sbjct: 72 THFYPLAGRINVNS------SVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSA 125
Query: 134 VEAHSFLQVP---PLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHVTTK---- 186
++V PL V+++ CGG + ++H + D + + FL+AW
Sbjct: 126 AYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETEI 185
Query: 187 --PNLDPPISPFHTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQAQPLVPA 244
PN D L R+ P V+ T +N +V
Sbjct: 186 VLPNFD-----------LAARHFPPVDNTPSPELVPDEN-----------------VVMK 217
Query: 245 SLTFTPSQILHLKRQCVPSLKCTTFEALASHTWRSWVRSLDLLPDSLNVKLLF----SVN 300
F +I L+ Q + + F + W +D+ K F +VN
Sbjct: 218 RFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVN 277
Query: 301 VRKKLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTIKLVQQAKASLTDDYVRSMVDL 360
+R ++NP +P +Y G + +V+ + + I ++ + DD+ +L
Sbjct: 278 LRSRMNPPLP--HYAMGNIATLLFAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNH---EL 332
Query: 361 LEDKS--YKTDLSSSLVISQWSKLGLEDLDFGEGKPM 395
L+ + Y+ + L + W +LG DLDFG GKP+
Sbjct: 333 LKGMTCLYELEPQELLSFTSWCRLGFYDLDFGWGKPL 369
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1T|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1U|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
pdb|2E1U|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Length = 454
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 143/367 (38%), Gaps = 48/367 (13%)
Query: 65 LKYSLSKVLVEYYPLAGRLRTSSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPN 124
+K+SLS L +YP G+L K ++ C EG A F + + D +L+
Sbjct: 65 IKHSLSITLKHFYPFVGKLVVYPAPTKKPEI-CYVEGDSVAVTFAE-CNLDLNELTGNHP 122
Query: 125 RSWRKLLYRV-------EAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFL 177
R+ K V +++P VQVT G+ + +HCL D FL
Sbjct: 123 RNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFL 182
Query: 178 HAWAHVTTKPNLDPPI-----SPFHTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVEVEI 232
AW + N D P + R + P Y K + E+ +
Sbjct: 183 KAWTSIARSGNNDESFLANGTRPLYDRIIKYP-------MLDEAYLKRAKVESFNEDYVT 235
Query: 233 NQYLQAQPLVPASLTFTPSQILHLKRQC---VPSLK-CTTFEALASHTWRSWVRSLDLLP 288
+ A+ T + I LK + +P+L+ ++F ++ W +S +
Sbjct: 236 QSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSRN--- 292
Query: 289 DSLNVKLLFSVNVRKKLNPEMPEGYYGN--GFVLACAQT----------SVNDLVNSNLY 336
D L + F ++ R ++ P +P Y+GN G A A+T + L+ NL+
Sbjct: 293 DKLQL-FGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLH 351
Query: 337 HTIKLVQQAKASLTDDYVRSMVDLLEDKSYKTDLSSSLVISQWSKLGLEDLDFGEGKPMH 396
T L L DD + S DL+ + T +S KL D+DFG GKP
Sbjct: 352 KT--LTDYKDGVLKDD-MESFNDLVSEGMPTT----MTWVSGTPKLRFYDMDFGWGKPKK 404
Query: 397 MGPVTSD 403
+ V+ D
Sbjct: 405 LETVSID 411
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
pdb|2E1V|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
Length = 454
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 140/367 (38%), Gaps = 48/367 (13%)
Query: 65 LKYSLSKVLVEYYPLAGRLRTSSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPN 124
+K+SLS L +YP G+L K ++ C EG A F + + D +L+
Sbjct: 65 IKHSLSITLKHFYPFVGKLVVYPAPTKKPEI-CYVEGDSVAVTFAECNL-DLNELTGNHP 122
Query: 125 RSWRKLLYRV-------EAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFL 177
R+ K V +++P VQVT G+ + +HCL D FL
Sbjct: 123 RNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFL 182
Query: 178 HAWAHVTTKPNLDPPI-----SPFHTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVEVEI 232
AW + N D P + R + P Y K + E+ +
Sbjct: 183 KAWTSIARSGNNDESFLANGTRPLYDRIIKYPX-------LDEAYLKRAKVESFNEDYVT 235
Query: 233 NQYLQAQPLVPASLTFTPSQILHLKRQC---VPSLK-CTTFEALASHTWRSWVRSLDLLP 288
+ A+ T + I LK + +P+L+ ++F ++ W +S +
Sbjct: 236 QSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSRN--- 292
Query: 289 DSLNVKLLFSVNVRKKLNPEMPEGYYGN--GFVLACAQT----------SVNDLVNSNLY 336
D L + F ++ R + P +P Y+GN G A A+T + L+ NL+
Sbjct: 293 DKLQL-FGFPIDRRARXKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLH 351
Query: 337 HTIKLVQQAKASLTDDYVRSMVDLLEDKSYKTDLSSSLVISQWSKLGLEDLDFGEGKPMH 396
T L L DD S DL+ + T +S KL D DFG GKP
Sbjct: 352 KT--LTDYKDGVLKDD-XESFNDLVSEGXPTT----XTWVSGTPKLRFYDXDFGWGKPKK 404
Query: 397 MGPVTSD 403
+ V+ D
Sbjct: 405 LETVSID 411
>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase
(Ntmat1) Complexed With Malonyl-Coa
Length = 453
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 139/365 (38%), Gaps = 41/365 (11%)
Query: 65 LKYSLSKVLVEYYPLAGRLRT----SSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLS 120
LK SLS L Y PLAG + S + + V N +F+ S DF L
Sbjct: 60 LKDSLSLTLKYYLPLAGNVACPQDWSGYPELRY-VTGNSVSVIFSE-----SDXDFNYLI 113
Query: 121 RKPNRSWRKLLYRV-------EAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGT 173
R+ + + V +A P L +QVT G+ + +H DG
Sbjct: 114 GYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATI 173
Query: 174 SQFLHAWAHVTT----KPNLDPPISPFHTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVE 229
+F+ AWA + + L PF+ R V+K N G + NE + +
Sbjct: 174 VKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPN---------GVGXSIWNEXKKYK 224
Query: 230 --VEINQYLQAQPLVPASLTFTPSQILHLKRQCV---PSLK-CTTFEALASHTWRSWVRS 283
+ + + V + T I LK + P L T+F ++ W ++S
Sbjct: 225 HXXKXSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKS 284
Query: 284 LDLLPDSL--NVKLLF--SVNVRKKLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLYH-T 338
+ + N F + + R + NP +P Y+GN V A+T DL +
Sbjct: 285 EAATGEEIDENGXEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIA 344
Query: 339 IKLVQQAKASLTDDYVRSMVDLLEDKSYKTDLSSSLVISQWSKLGLEDLDFGEGKPMHMG 398
++L+ +A D + + K D SL ++ KL L DFG G+P +
Sbjct: 345 VELIGEAIRKRXKDEEWILSGSWFKEYDKVDAKRSLSVAGSPKLDLYAADFGWGRPEKLE 404
Query: 399 PVTSD 403
V+ D
Sbjct: 405 FVSID 409
>pdb|2RKV|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Coenzyme A And T-2 Mycotoxin
pdb|3B2S|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Coenzyme A And Deoxynivalenol
pdb|3B30|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Ethyl Coenzyme A
Length = 451
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 107/275 (38%), Gaps = 42/275 (15%)
Query: 144 PLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHVTTKPNLDPPISPFHTRHVLK 203
P+++ N GG+IL H D +G + + PF +
Sbjct: 135 PVILLQLNFIKGGLILTVNGQHGAMDMVGQDAVIRLLSKACRN-------DPFTEEEMTA 187
Query: 204 PRNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQAQP------LVPAS-----LTFTPSQ 252
+N +N T EV+ +Q ++A L P S TF+P
Sbjct: 188 ------MNLDRKTIVPYLENYTIGPEVD-HQIVKADVAGGDAVLTPVSASWAFFTFSPKA 240
Query: 253 ILHLKRQCVPSLKCTTF-----EALASHTWRSWVR-SLDLLPDSLNVKLLFSVNVRKKLN 306
+ LK +L +T +AL++ W+S R L+ + S + +V+ R +
Sbjct: 241 MSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG 300
Query: 307 PEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTI-KLVQQAKASLTDDYVRSMVDLLEDKS 365
+ Y G + +++ ++ N +L T +L + + R + L +
Sbjct: 301 --VSNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNP 358
Query: 366 YKT--------DLSSSLVISQWSKLGLEDLDFGEG 392
K+ D S+S+++S W+K+GL D DFG G
Sbjct: 359 DKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLG 393
>pdb|2RKT|A Chain A, Crystal Sructure Of Apo F. Graminearum Tri101
Length = 452
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 100/275 (36%), Gaps = 42/275 (15%)
Query: 144 PLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHV----------TTKPNLD-PP 192
P+++ N GG+IL H D +G + + T NLD
Sbjct: 136 PVILLQLNFIKGGLILTVNGQHGAXDXVGQDAVIRLLSKACRNDPFTEEEXTAXNLDRKT 195
Query: 193 ISPFHTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQAQPLVPASLTFTPSQ 252
I P+ + + P H K V ++ A TF+P
Sbjct: 196 IVPYLENYTIGPE-------VDHQIVKADVAGGDAVLTPVSASW-------AFFTFSPKA 241
Query: 253 ILHLKRQCVPSLKCTTF-----EALASHTWRSWVR-SLDLLPDSLNVKLLFSVNVRKKLN 306
LK +L +T +AL++ W+S R L+ + S + +V+ R
Sbjct: 242 XSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAXG 301
Query: 307 PEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTI-KLVQQAKASLTDDYVRSMVDLLEDKS 365
+ Y G +++ ++ N +L T +L + + R + L +
Sbjct: 302 --VSNNYPGLLQNXTYHNSTIGEIANESLGATASRLRSELDPASXRQRTRGLATYLHNNP 359
Query: 366 YKT--------DLSSSLVISQWSKLGLEDLDFGEG 392
K+ D S+S+ +S W+K+GL D DFG G
Sbjct: 360 DKSNVSLTADADPSTSVXLSSWAKVGLWDYDFGLG 394
>pdb|2ZBA|A Chain A, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|B Chain B, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|C Chain C, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|D Chain D, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
Length = 459
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 244 ASLTFTPSQILHLKRQCVPSLKCT-----TFEALASHTWRSWVR-SLDLLPDSLNVKLLF 297
A +FTP + LK +L + T +AL++ W+S R L L S +
Sbjct: 240 AFFSFTPKALSELKDAATKTLDASSKFVSTDDALSAFIWQSTSRVRLARLDASTPTEFCR 299
Query: 298 SVNVRKKLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTIKLVQQAKASLTDDYVRSM 357
+V+ R + Y G ++V ++ N L T + ++ L D +R
Sbjct: 300 AVDXRGPXG--VSSTYPGLLQNXTYHDSTVAEIANEPLGAT---ASRLRSELNSDRLRRR 354
Query: 358 VDLLE-------DKS-----YKTDLSSSLVISQWSKLGLEDLDFGEG 392
L DKS + SSS+ +S W+K+G + DFG G
Sbjct: 355 TQALATYXHGLPDKSSVSLTADANPSSSIXLSSWAKVGCWEYDFGFG 401
>pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From
Ricketts Prowazekii Bound To Methionine
pdb|3MX6|B Chain B, Crystal Structure Of Methionine Aminopeptidase From
Ricketts Prowazekii Bound To Methionine
Length = 262
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 105 AAAFMDISSEDFLQLSRKPNRSWRKLLYRVEAHSFLQVPPLVVQVTNLRCGGMILCTAIN 164
AA + + DF+ KPN + L H+F+ + N + +CT+IN
Sbjct: 19 AAGKLAAETLDFITDHVKPNVTTNSL--NDLCHNFITSHNAIPAPLNYKGFPKSICTSIN 76
Query: 165 HCLCDGI 171
H +C GI
Sbjct: 77 HVVCHGI 83
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,362,804
Number of Sequences: 62578
Number of extensions: 544366
Number of successful extensions: 1247
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1204
Number of HSP's gapped (non-prelim): 19
length of query: 432
length of database: 14,973,337
effective HSP length: 102
effective length of query: 330
effective length of database: 8,590,381
effective search space: 2834825730
effective search space used: 2834825730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)