Query         036687
Match_columns 432
No_of_seqs    165 out of 1215
Neff          8.9 
Searched_HMMs 29240
Date          Mon Mar 25 07:01:39 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036687.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036687hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4g22_A Hydroxycinnamoyl-COA sh 100.0   3E-81   1E-85  632.8  39.7  406   15-432     7-432 (439)
  2 2xr7_A Malonyltransferase; xen 100.0 1.9E-73 6.7E-78  578.5  29.3  405   16-432     2-442 (453)
  3 2bgh_A Vinorine synthase; VS,  100.0   6E-72 2.1E-76  561.8  33.5  381   15-432     4-407 (421)
  4 2e1v_A Acyl transferase; BAHD  100.0 2.7E-72 9.3E-77  570.1  24.4  402   15-432     6-442 (454)
  5 2rkv_A Trichothecene 3-O-acety 100.0 2.6E-64 8.8E-69  511.4  32.7  386   34-432     4-437 (451)
  6 1q9j_A PAPA5, polyketide synth  99.3 2.6E-09 8.8E-14  106.0  26.9  295   32-349     5-314 (422)
  7 4hvm_A Tlmii; PSI-biology, mid  98.8 4.5E-07 1.5E-11   91.9  21.7  293   32-349    11-328 (493)
  8 2jgp_A Tyrocidine synthetase 3  98.8   3E-07   1E-11   93.9  20.3  287   32-348    94-400 (520)
  9 1l5a_A Amide synthase, VIBH; n  98.6 8.3E-07 2.8E-11   88.3  17.0  272   50-349    23-305 (436)
 10 2xhg_A Tyrocidine synthetase A  98.5 4.9E-05 1.7E-09   76.0  25.4  295   32-349    15-336 (466)
 11 2vsq_A Surfactin synthetase su  98.5 4.8E-06 1.6E-10   94.4  19.2  278   50-349    37-328 (1304)
 12 3fot_A 15-O-acetyltransferase;  97.7 0.00029   1E-08   71.4  13.5  149  241-390   277-451 (519)
 13 3cla_A Type III chloramphenico  67.7     2.8 9.7E-05   36.7   2.7   44  142-185   164-209 (213)
 14 2i9d_A Chloramphenicol acetylt  66.6     3.1 0.00011   36.6   2.7   28  157-184   189-216 (217)
 15 1q23_A Chloramphenicol acetylt  65.6     3.3 0.00011   36.5   2.7   44  142-185   168-213 (219)
 16 3b8k_A PDCE2;, dihydrolipoylly  63.0     4.2 0.00014   36.3   2.9   29  157-185   204-232 (239)
 17 3rqc_A Probable lipoamide acyl  61.1     3.9 0.00013   36.2   2.3   29  157-185   187-215 (224)
 18 1dpb_A Dihydrolipoyl-transacet  60.3     4.6 0.00016   36.2   2.7   29  157-185   208-236 (243)
 19 1scz_A E2, dihydrolipoamide su  60.3     4.7 0.00016   35.9   2.7   29  157-185   196-224 (233)
 20 2ii3_A Lipoamide acyltransfera  58.3     5.2 0.00018   36.3   2.7   29  157-185   224-252 (262)
 21 3mae_A 2-oxoisovalerate dehydr  51.7     7.9 0.00027   34.9   2.7   29  157-185   210-238 (256)
 22 3l60_A Branched-chain alpha-ke  50.3     8.5 0.00029   34.6   2.7   29  157-185   205-233 (250)
 23 2xl1_A Arginine attenuator pep  44.8      13 0.00046   19.6   1.8   18  265-282     7-24  (26)
 24 2kl8_A OR15; structural genomi  37.2      36  0.0012   23.1   3.5   39   59-98      9-47  (85)
 25 3dva_I Dihydrolipoyllysine-res  36.7     7.3 0.00025   38.0   0.0   29  157-185   391-419 (428)
 26 1baz_A ARC repressor; transcri  31.1      97  0.0033   20.1   4.9   43  240-283     6-48  (53)
 27 3qoq_A Alginate and motility r  28.4      96  0.0033   21.6   4.7   45  240-285    18-62  (69)
 28 2k9i_A Plasmid PRN1, complete   24.3 1.4E+02  0.0047   18.9   4.8   42  239-281     7-48  (55)
 29 1x93_A Hypothetical protein HP  23.8 1.5E+02   0.005   18.9   4.3   23  242-264     2-24  (55)
 30 2cpg_A REPA protein, transcrip  21.4   1E+02  0.0034   18.7   3.5   36  243-279     4-39  (45)

No 1  
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00  E-value=3e-81  Score=632.77  Aligned_cols=406  Identities=28%  Similarity=0.507  Sum_probs=348.5

Q ss_pred             cEEeecceeeeCCCCCCCceeeCCccccccccccceeEEEEEeC-----CCcHHHHHHHHHhhcccccCCCeeEeeCCCC
Q 036687           15 CYHPNQPILISPSTPTPNHSLYLSNLDDQKFLRFSIKYLYLYKK-----SISLDFLKYSLSKVLVEYYPLAGRLRTSSED   89 (432)
Q Consensus        15 ~v~~~~~~~V~P~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~-----~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~   89 (432)
                      .|++.+.++|+|+.|+|++.++||+||+.+ ++.|++.+|||+.     ...++.||+||+++|++||||||||+.+++ 
T Consensus         7 ~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~-~~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~-   84 (439)
T 4g22_A            7 KIEVKESTMVRPAQETPGRNLWNSNVDLVV-PNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLKRDED-   84 (439)
T ss_dssp             CEEEEEEEEECCSSCCCCCEECCCHHHHSC-CTTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEEECTT-
T ss_pred             EEEEeeeEEEeCCCCCCCCeecCChhHhCc-cccceeeEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeeeeCCC-
Confidence            489999999999999999999999999985 5889999999985     246899999999999999999999998775 


Q ss_pred             CCceEEEecCCCeEEEEEEccCChhhhhCCCCCchhhhhcccccccc-cCCCCCCCeEEEEEeeccCceeEecceeeecc
Q 036687           90 DFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPNRSWRKLLYRVEA-HSFLQVPPLVVQVTNLRCGGMILCTAINHCLC  168 (432)
Q Consensus        90 ~g~~~i~~~~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~~l~p~~~~-~~~~~~Pll~vqvt~f~~GG~~l~~~~~H~v~  168 (432)
                       |+++|+||++||.|++|+++.+++|+.+..|.+  .++.|+|.... .+..+.|++.||||+|+|||++||+++||.++
T Consensus        85 -g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~--~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~  161 (439)
T 4g22_A           85 -GRIEIECNGEGVLFVEAESDGVVDDFGDFAPTL--ELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAA  161 (439)
T ss_dssp             -SCEEEECCCCCEEEEEEEESSCGGGGTTCCCCG--GGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTC
T ss_pred             -CCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCH--HHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccC
Confidence             899999999999999999999999997633333  45677774322 23457899999999999999999999999999


Q ss_pred             chhhHHHHHHHHhhhhCCCCCCCCCCCCCCcCCCCCCCCCCCcCCCCCCCccccccchhhHHhhhhccCC-CCceeEEEE
Q 036687          169 DGIGTSQFLHAWAHVTTKPNLDPPISPFHTRHVLKPRNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQA-QPLVPASLT  247 (432)
Q Consensus       169 Dg~~~~~fl~~wa~~~r~G~~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  247 (432)
                      ||.|+.+|+++||+++| |. +...+|++||+++..+++|...+++.+|...+.....  ....+  ... .+++.++|+
T Consensus       162 Dg~~~~~Fl~~wa~~~r-g~-~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~f~  235 (439)
T 4g22_A          162 DGFSGLHFINSWSDMAR-GL-DVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVS--PQTAA--SDSVPETAVSIFK  235 (439)
T ss_dssp             CHHHHHHHHHHHHHHHT-TC-CCSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC-------------------CEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHhC-CC-CCCCCCccccccccCCCCCCCCcCcccccCCCCCccc--ccccc--cCCcccceEEEEE
Confidence            99999999999999999 87 3467899999999888887666667776654321000  00000  111 568999999


Q ss_pred             eCHHHHHHHHHHcCCC---CCcchHHHHHHHHHHHHHhhcCCCCCCCeEEEEEEecccCcCCCCCCCCcccccccceecc
Q 036687          248 FTPSQILHLKRQCVPS---LKCTTFEALASHTWRSWVRSLDLLPDSLNVKLLFSVNVRKKLNPEMPEGYYGNGFVLACAQ  324 (432)
Q Consensus       248 ~~~~~l~~Lk~~~~~~---~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~  324 (432)
                      |++++|++||+++.++   .++|++|+|+||+|+|+++||. +++++.+.+.++||+|+|++|++|++||||++..+.+.
T Consensus       236 fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~-~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~  314 (439)
T 4g22_A          236 LTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARG-LEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPI  314 (439)
T ss_dssp             ECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTT-CCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCE
T ss_pred             ECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcC-CCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcc
Confidence            9999999999999764   2799999999999999999998 77788999999999999999999999999999999999


Q ss_pred             cchhhhccccHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcCCC-------CCC-CCcEEEeecCCCCCCcccccCCccce
Q 036687          325 TSVNDLVNSNLYHTIKLVQQAKASLTDDYVRSMVDLLEDKSYK-------TDL-SSSLVISQWSKLGLEDLDFGEGKPMH  396 (432)
Q Consensus       325 ~~~~~l~~~~l~~~A~~ir~~i~~~~~~~v~~~~~~~~~~~~~-------p~~-~~~~~~ssw~~~~~y~~DFG~G~P~~  396 (432)
                      ++++||.+.+|+++|.+||++++++|++++++.++|++..++.       +.+ ..++.+|||.++++|++|||||||++
T Consensus       315 ~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~  394 (439)
T 4g22_A          315 AIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIF  394 (439)
T ss_dssp             EEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSE
T ss_pred             eEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcce
Confidence            9999999999999999999999999999999999999875321       111 46899999999999999999999999


Q ss_pred             eeccc--cCeEEEEeccCCCCCcEEEEEecChhhhcCC
Q 036687          397 MGPVT--SDIYCLFLPVTGDLNSTRVLVSMPEGVVEKF  432 (432)
Q Consensus       397 v~~~~--~~g~~~ilp~~~~~~g~ev~v~L~~~~m~~f  432 (432)
                      +++..  .+|.++++|.++++||++|.|+|++++|++|
T Consensus       395 ~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f  432 (439)
T 4g22_A          395 MGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLF  432 (439)
T ss_dssp             EEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHH
T ss_pred             eeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHH
Confidence            99876  6799999998777899999999999999986


No 2  
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00  E-value=1.9e-73  Score=578.47  Aligned_cols=405  Identities=19%  Similarity=0.265  Sum_probs=325.6

Q ss_pred             EEeecceeeeCCCC-CCCceeeCCccccccccccceeEEEEEeCC--------CcHHHHHHHHHhhcccccCCCeeEeeC
Q 036687           16 YHPNQPILISPSTP-TPNHSLYLSNLDDQKFLRFSIKYLYLYKKS--------ISLDFLKYSLSKVLVEYYPLAGRLRTS   86 (432)
Q Consensus        16 v~~~~~~~V~P~~~-~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~--------~~~~~L~~sL~~~L~~~p~LaGrl~~~   86 (432)
                      |++.++++|+|+.+ ++++.++||+||+.+....|++.+|||+..        ..++.||+||+++|++||||||||+.+
T Consensus         2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~   81 (453)
T 2xr7_A            2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACP   81 (453)
T ss_dssp             CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEE
T ss_pred             eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEcc
Confidence            78999999999987 557899999999985434599999999842        247899999999999999999999987


Q ss_pred             CCCCCceEEEec-CCCeEEEEEEccCChhhhhCCCCCchhhhhcccccccccC----CCCCCCeEEEEEeeccCceeEec
Q 036687           87 SEDDFKLQVDCN-GEGAVFAAAFMDISSEDFLQLSRKPNRSWRKLLYRVEAHS----FLQVPPLVVQVTNLRCGGMILCT  161 (432)
Q Consensus        87 ~~~~g~~~i~~~-~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~----~~~~Pll~vqvt~f~~GG~~l~~  161 (432)
                      ++.+|+++|+|+ ++||.|++|+++.+++++....+.+...++.|+|......    ..+.|++.+|||+|.|||++||+
T Consensus        82 ~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~  161 (453)
T 2xr7_A           82 QDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGF  161 (453)
T ss_dssp             SSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEE
T ss_pred             CCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEE
Confidence            521389999999 5999999999999999997533333334567777543211    12289999999999999999999


Q ss_pred             ceeeeccchhhHHHHHHHHhhhhCCCC-C---CCCCCCCCCcCCCCCCCCCCCcCCCCC-CCccccccchhhHHhhhhcc
Q 036687          162 AINHCLCDGIGTSQFLHAWAHVTTKPN-L---DPPISPFHTRHVLKPRNPPQVNFTHHG-YTKTTQNETAQVEVEINQYL  236 (432)
Q Consensus       162 ~~~H~v~Dg~~~~~fl~~wa~~~r~G~-~---~~~~~P~~dr~~l~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  236 (432)
                      ++||.++||.|+.+|+++||+++|.|. .   ++..+|++||+.+..  ++.....+.+ +...+..      .......
T Consensus       162 ~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~--p~~~~~~~~~~~~~~~~~------~~~~~~~  233 (453)
T 2xr7_A          162 TNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKD--PNGVGMSIWNEMKKYKHM------MKMSDVV  233 (453)
T ss_dssp             EECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCC--SSCHHHHTTTTGGGCTTT------SCCSCCC
T ss_pred             eeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccC--CCCcchHHHHhccccCCc------ccccccc
Confidence            999999999999999999999999433 1   234568999998752  2221110101 1000000      0000001


Q ss_pred             CCCCceeEEEEeCHHHHHHHHHHcCCC----CCcchHHHHHHHHHHHHHhhcCCC-----CCCCeEEEEEEecccCcCCC
Q 036687          237 QAQPLVPASLTFTPSQILHLKRQCVPS----LKCTTFEALASHTWRSWVRSLDLL-----PDSLNVKLLFSVNVRKKLNP  307 (432)
Q Consensus       237 ~~~~~~~~~~~~~~~~l~~Lk~~~~~~----~~~S~~d~l~A~lW~~~~~ar~~~-----~~~~~~~l~~~vd~R~rl~p  307 (432)
                      ...+...++|+|++++|++||+++.++    .++|++|+|+|++|+|+++||. .     ++++.+.+.++||+|+|++|
T Consensus       234 ~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~-~~~~~~~~~~~~~l~~~vd~R~rl~p  312 (453)
T 2xr7_A          234 TPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEA-ATGEEIDENGMEFFGCAADCRAQFNP  312 (453)
T ss_dssp             CCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHH-HTTCCCCTTSEEEEEEECCTTSCSSS
T ss_pred             CCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhc-cccccCCCCcceEEEEEecccccCCC
Confidence            234577999999999999999998642    2699999999999999999997 4     56788999999999999999


Q ss_pred             CCCCCcccccccceecccchhhhcc-ccHHHHHHHHHHHHHh--cCHH-HHHHHHHHhhhcCCCCCCCCcEEEeecCCCC
Q 036687          308 EMPEGYYGNGFVLACAQTSVNDLVN-SNLYHTIKLVQQAKAS--LTDD-YVRSMVDLLEDKSYKTDLSSSLVISQWSKLG  383 (432)
Q Consensus       308 ~lp~~Y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~ir~~i~~--~~~~-~v~~~~~~~~~~~~~p~~~~~~~~ssw~~~~  383 (432)
                      ++|++||||++..+.+.++++||.+ .+|+++|.+||+++.+  .+++ ++++  +|++..+... ....+.+|||.+++
T Consensus       313 plP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~~~-~~~~~~vssw~~~~  389 (453)
T 2xr7_A          313 PLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDKVD-AKRSLSVAGSPKLD  389 (453)
T ss_dssp             CCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCCSC-GGGEEEECSCSSCC
T ss_pred             CCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHhhc-cCCcEEEeccccCC
Confidence            9999999999999999999999995 8999999999999999  5788 9988  8887644321 13589999999999


Q ss_pred             CCcccccCCccceeeccc--cCe--EEEEeccCCCCCcEEEEEecChhhhcCC
Q 036687          384 LEDLDFGEGKPMHMGPVT--SDI--YCLFLPVTGDLNSTRVLVSMPEGVVEKF  432 (432)
Q Consensus       384 ~y~~DFG~G~P~~v~~~~--~~g--~~~ilp~~~~~~g~ev~v~L~~~~m~~f  432 (432)
                      +|++|||||+|.++++..  .+|  .++++|.+.++||++|.|+|++++|++|
T Consensus       390 ~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f  442 (453)
T 2xr7_A          390 LYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAF  442 (453)
T ss_dssp             GGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHH
T ss_pred             ccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHH
Confidence            999999999999999876  568  7888887777889999999999999986


No 3  
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00  E-value=6e-72  Score=561.84  Aligned_cols=381  Identities=23%  Similarity=0.355  Sum_probs=318.7

Q ss_pred             cEEeecceeeeCCCCCCC--ceeeCCccccccccccceeEEEEEeCC--------CcHHHHHHHHHhhcccccCCCeeEe
Q 036687           15 CYHPNQPILISPSTPTPN--HSLYLSNLDDQKFLRFSIKYLYLYKKS--------ISLDFLKYSLSKVLVEYYPLAGRLR   84 (432)
Q Consensus        15 ~v~~~~~~~V~P~~~~~~--~~~~Ls~lD~~~~~~~~~~~~~~f~~~--------~~~~~L~~sL~~~L~~~p~LaGrl~   84 (432)
                      .|++.++++|+|+.|+|.  +.++||+||+.. ++.|++.+|||+..        .+++.||+||+++|++||||||||+
T Consensus         4 ~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~   82 (421)
T 2bgh_A            4 QMEKVSEELILPSSPTPQSLKCYKISHLDQLL-LTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN   82 (421)
T ss_dssp             CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTS-CSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred             eEEEeeeEEEeCCCCCCCCCcccCCChHHhcc-cccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence            389999999999998875  489999999975 57899999999852        2589999999999999999999996


Q ss_pred             eCCCCCCceEEEecCCCeEEEEEEccCChhhhhCCCCCchhhhhcccccccccC----CCCCCCeEEEEEeeccCceeEe
Q 036687           85 TSSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPNRSWRKLLYRVEAHS----FLQVPPLVVQVTNLRCGGMILC  160 (432)
Q Consensus        85 ~~~~~~g~~~i~~~~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~----~~~~Pll~vqvt~f~~GG~~l~  160 (432)
                            ++++|+|+++||.|++++++.+++|+.+..+.+ ...+.|+|.....+    ..+.|++.+|||+|.|||++||
T Consensus        83 ------~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~-~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg  155 (421)
T 2bgh_A           83 ------VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVEL-EKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIG  155 (421)
T ss_dssp             ------TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSG-GGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEE
T ss_pred             ------CCcEEEEcCCceEEEEEEEcCCHHHHhccCCCh-HHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEE
Confidence                  258999999999999999999999998633433 24567777652222    4568999999999999999999


Q ss_pred             cceeeeccchhhHHHHHHHHhhhhCCCCCCCCCCCCCCc-CCCCC--CCCCCCcCCCCCCCccccccchhhHHhhhhccC
Q 036687          161 TAINHCLCDGIGTSQFLHAWAHVTTKPNLDPPISPFHTR-HVLKP--RNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQ  237 (432)
Q Consensus       161 ~~~~H~v~Dg~~~~~fl~~wa~~~r~G~~~~~~~P~~dr-~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (432)
                      +++||.++||.|+.+|+++||+++| |...+ .+|.+|| +.+.+  +++|.     +.   .               ..
T Consensus       156 ~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~~~-~~P~~dr~~~l~p~~~~~~~-----~~---~---------------~~  210 (421)
T 2bgh_A          156 VNLSHKIADVLSLATFLNAWTATCR-GETEI-VLPNFDLAARHFPPVDNTPS-----PE---L---------------VP  210 (421)
T ss_dssp             EEEETTTCCHHHHHHHHHHHHHHHT-TCSCC-CCCBCSHHHHHSCCCTTCCC-----CC---C---------------CC
T ss_pred             EEeeEEechHHHHHHHHHHHHHHhc-CCCCC-CCCccccccccCCCcccCCC-----Cc---c---------------CC
Confidence            9999999999999999999999999 86333 6789999 64432  12221     00   0               12


Q ss_pred             CCCceeEEEEeCHHHHHHHHHHcCCCC---CcchHHHHHHHHHHHHHhhcCC-CCCCCeEEEEEEecccCcCCCCCCCCc
Q 036687          238 AQPLVPASLTFTPSQILHLKRQCVPSL---KCTTFEALASHTWRSWVRSLDL-LPDSLNVKLLFSVNVRKKLNPEMPEGY  313 (432)
Q Consensus       238 ~~~~~~~~~~~~~~~l~~Lk~~~~~~~---~~S~~d~l~A~lW~~~~~ar~~-~~~~~~~~l~~~vd~R~rl~p~lp~~Y  313 (432)
                      ..++..++|+|++++|++||+++.++.   ++|++|+|+|++|+|+++||.. .++++.+.+.++||+|+|++|++|++|
T Consensus       211 ~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y  290 (421)
T 2bgh_A          211 DENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYA  290 (421)
T ss_dssp             CSSEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTB
T ss_pred             ccceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCc
Confidence            346889999999999999999998652   7999999999999999999862 135678999999999999999999999


Q ss_pred             ccccccceecccchhhhccccHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcCCCCCCCCcEEEeecCCCCCCcccccCCc
Q 036687          314 YGNGFVLACAQTSVNDLVNSNLYHTIKLVQQAKASLTDDYVRSMVDLLEDKSYKTDLSSSLVISQWSKLGLEDLDFGEGK  393 (432)
Q Consensus       314 ~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~~i~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~ssw~~~~~y~~DFG~G~  393 (432)
                      +||++..+.+.+++++  +.+|+++|.+||+++.++++++++.+.++.+.....+. ...+.+|||.++++|++|||||+
T Consensus       291 ~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vssw~~~~~y~~DFGwGk  367 (421)
T 2bgh_A          291 MGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELEP-QELLSFTSWCRLGFYDLDFGWGK  367 (421)
T ss_dssp             CSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHTSCG-GGEEEEEEETTSCGGGCCSSSCC
T ss_pred             cceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCeEEEeccccCCCcccccCCCc
Confidence            9999999988888876  78999999999999999998999988887654322111 24699999999999999999999


Q ss_pred             cceeeccc--cCeEEEEeccCCCCCcEEEEEecChhhhcCC
Q 036687          394 PMHMGPVT--SDIYCLFLPVTGDLNSTRVLVSMPEGVVEKF  432 (432)
Q Consensus       394 P~~v~~~~--~~g~~~ilp~~~~~~g~ev~v~L~~~~m~~f  432 (432)
                      |.++++..  .+|.++++|.+. ++|+||.|+|++++|++|
T Consensus       368 P~~v~~~~~~~~g~~~~~p~~~-~~gi~v~v~L~~~~m~~f  407 (421)
T 2bgh_A          368 PLSACTTTFPKRNAALLMDTRS-GDGVEAWLPMAEDEMAML  407 (421)
T ss_dssp             CSEEECCCCCSTTEEEEEECTT-SSSEEEEEEEEHHHHHHS
T ss_pred             cCeecccccCcCCEEEEEecCC-CCeEEEEEEcCHHHHHHH
Confidence            99999876  578999999765 458999999999999987


No 4  
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00  E-value=2.7e-72  Score=570.07  Aligned_cols=402  Identities=20%  Similarity=0.272  Sum_probs=317.6

Q ss_pred             cEEeecceeeeCCCC-CCCceeeCCccccccccccceeEEEEEeCC--------CcHHHHHHHHHhhcccccCCCeeEe-
Q 036687           15 CYHPNQPILISPSTP-TPNHSLYLSNLDDQKFLRFSIKYLYLYKKS--------ISLDFLKYSLSKVLVEYYPLAGRLR-   84 (432)
Q Consensus        15 ~v~~~~~~~V~P~~~-~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~--------~~~~~L~~sL~~~L~~~p~LaGrl~-   84 (432)
                      .|++.++++|+|+.+ ++++.++||+||+.+....|++.+|||+..        ..+++||+||+++|++||||||||+ 
T Consensus         6 ~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~   85 (454)
T 2e1v_A            6 ILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVV   85 (454)
T ss_dssp             CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEEE
T ss_pred             eEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceeeee
Confidence            599999999999987 567899999999985444699999999852        2478999999999999999999998 


Q ss_pred             eCCCCCCceEEEec-CCCeEEEEEEccCChhhhhCCCCCchhhhhccccccccc----CCCCCCCeEEEEEeeccCceeE
Q 036687           85 TSSEDDFKLQVDCN-GEGAVFAAAFMDISSEDFLQLSRKPNRSWRKLLYRVEAH----SFLQVPPLVVQVTNLRCGGMIL  159 (432)
Q Consensus        85 ~~~~~~g~~~i~~~-~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~----~~~~~Pll~vqvt~f~~GG~~l  159 (432)
                      .+++ +|+++|+|+ ++||.|++|+++.+++++....+.+...++.|+|.....    +..+.|++.+|||+|.|||++|
T Consensus        86 ~~~~-~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~l  164 (454)
T 2e1v_A           86 YPAP-TKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAI  164 (454)
T ss_dssp             CSSS-SSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEE
T ss_pred             ccCC-CCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEEE
Confidence            5422 389999999 599999999999999999753332333456677654311    1234599999999999999999


Q ss_pred             ecceeeeccchhhHHHHHHHHhhhhCCCCC-----CCCCCCCCCcCCCCCCCCCCCcCCCC-CCCccccccchhhHHhh-
Q 036687          160 CTAINHCLCDGIGTSQFLHAWAHVTTKPNL-----DPPISPFHTRHVLKPRNPPQVNFTHH-GYTKTTQNETAQVEVEI-  232 (432)
Q Consensus       160 ~~~~~H~v~Dg~~~~~fl~~wa~~~r~G~~-----~~~~~P~~dr~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~-  232 (432)
                      |+++||.++||.|+.+|+++||+++|.|..     ++..+|++|| .+.  +|+ ....+. .+.....      ...+ 
T Consensus       165 g~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~--~p~-~~~~~~~~~~~~~~------~~~~~  234 (454)
T 2e1v_A          165 GITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK--YPM-LDEAYLKRAKVESF------NEDYV  234 (454)
T ss_dssp             EEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC--CHH-HHHHHHHHTTCTTH------HHHCC
T ss_pred             EEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCC--CCC-cchHHHHhhhcccc------ccccC
Confidence            999999999999999999999999994441     1245789999 764  222 110000 0100000      0000 


Q ss_pred             -hhccCCCCceeEEEEeCHHHHHHHHHHcCCC----CCcchHHHHHHHHHHHHHhhcCCCCCCCeEEEEEEecccCcCCC
Q 036687          233 -NQYLQAQPLVPASLTFTPSQILHLKRQCVPS----LKCTTFEALASHTWRSWVRSLDLLPDSLNVKLLFSVNVRKKLNP  307 (432)
Q Consensus       233 -~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~----~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~l~~~vd~R~rl~p  307 (432)
                       .......+...++|+|++++|++||+++.++    .++|++|+|+|++|+|+++||    +++.+.+.++||+|+|++|
T Consensus       235 ~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar----~~~~~~l~~~vd~R~rl~p  310 (454)
T 2e1v_A          235 TQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR----NDKLQLFGFPIDRRARMKP  310 (454)
T ss_dssp             CCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH----CCSEEEEEEEEECGGGSSS
T ss_pred             cccCCCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc----CCCceEEEEEecchhccCC
Confidence             0000234678999999999999999998643    269999999999999999998    5678999999999999999


Q ss_pred             CCCCCcccccccceecccchhhhcc-ccHHHHHHHHHHHHHhcCHHH----HHH-HHHHhhhcCCCCCCCCcEEEeecCC
Q 036687          308 EMPEGYYGNGFVLACAQTSVNDLVN-SNLYHTIKLVQQAKASLTDDY----VRS-MVDLLEDKSYKTDLSSSLVISQWSK  381 (432)
Q Consensus       308 ~lp~~Y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~ir~~i~~~~~~~----v~~-~~~~~~~~~~~p~~~~~~~~ssw~~  381 (432)
                      ++|++|+||++..+.+.++++||.+ .+|+++|.+||+++.+++++|    +++ ..+|++..+... ....+.+|||.+
T Consensus       311 plP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vssw~~  389 (454)
T 2e1v_A          311 PIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGM-PTTMTWVSGTPK  389 (454)
T ss_dssp             CCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHCC-CSEEEEEECCTT
T ss_pred             CCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhc-CCceEEEecCCC
Confidence            9999999999999999999999985 899999999999999997444    444 555665432221 134899999999


Q ss_pred             CCCCcccccCCccceeeccc--cCeEEEEeccCCCCCcEEEEEecChhhhcCC
Q 036687          382 LGLEDLDFGEGKPMHMGPVT--SDIYCLFLPVTGDLNSTRVLVSMPEGVVEKF  432 (432)
Q Consensus       382 ~~~y~~DFG~G~P~~v~~~~--~~g~~~ilp~~~~~~g~ev~v~L~~~~m~~f  432 (432)
                      +++|++|||||||.++++..  .+|.++++|.+.++||+||.|+|++++|++|
T Consensus       390 ~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f  442 (454)
T 2e1v_A          390 LRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDF  442 (454)
T ss_dssp             SCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHH
T ss_pred             CCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHH
Confidence            99999999999999999876  5789999998777899999999999999986


No 5  
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00  E-value=2.6e-64  Score=511.44  Aligned_cols=386  Identities=17%  Similarity=0.178  Sum_probs=302.8

Q ss_pred             eeeCCccccccc-cccceeEEEEEeC-C-----CcHHHHHHHHHhhcccccCCCeeEeeCCC---CCCceEEEecCCCeE
Q 036687           34 SLYLSNLDDQKF-LRFSIKYLYLYKK-S-----ISLDFLKYSLSKVLVEYYPLAGRLRTSSE---DDFKLQVDCNGEGAV  103 (432)
Q Consensus        34 ~~~Ls~lD~~~~-~~~~~~~~~~f~~-~-----~~~~~L~~sL~~~L~~~p~LaGrl~~~~~---~~g~~~i~~~~~gv~  103 (432)
                      .++||.|||+.+ ++.|++.+|||+. .     ..++.||+||+++|++||||||||+.++.   ++|+++|+|++.+..
T Consensus         4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~   83 (451)
T 2rkv_A            4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR   83 (451)
T ss_dssp             CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred             cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence            468999999852 4789999999984 2     25799999999999999999999987652   248999998776767


Q ss_pred             EEEEEccC-----ChhhhhC-CCCCchhhhhcccccc---cc---cCCCCCCCeEEEEEeeccCceeEecceeeeccchh
Q 036687          104 FAAAFMDI-----SSEDFLQ-LSRKPNRSWRKLLYRV---EA---HSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGI  171 (432)
Q Consensus       104 f~~a~~~~-----~~~~l~~-~~~~~~~~~~~l~p~~---~~---~~~~~~Pll~vqvt~f~~GG~~l~~~~~H~v~Dg~  171 (432)
                      |++++++.     ++++|.+ ..|.+......+.|..   ..   ....+.|++.+||| |.|||++||+++||.++||.
T Consensus        84 ~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v~Dg~  162 (451)
T 2rkv_A           84 VVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGAMDMV  162 (451)
T ss_dssp             EEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTTCCHH
T ss_pred             EEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhccccHH
Confidence            99988764     6888864 3333321112233322   11   12345899999999 67999999999999999999


Q ss_pred             hHHHHHHHHhhhhCCCCCCCC---CCCCCCcCCCCC---CCCCCCcCCCCCCCccccccchhhHHhhhhccCCCCceeEE
Q 036687          172 GTSQFLHAWAHVTTKPNLDPP---ISPFHTRHVLKP---RNPPQVNFTHHGYTKTTQNETAQVEVEINQYLQAQPLVPAS  245 (432)
Q Consensus       172 ~~~~fl~~wa~~~r~G~~~~~---~~P~~dr~~l~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (432)
                      |+.+|+++||+++| |...+.   .+|.+||+.+.+   +.+|....++.+|...+...      ..  .....++..++
T Consensus       163 g~~~Fl~awa~~~r-g~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~  233 (451)
T 2rkv_A          163 GQDAVIRLLSKACR-NDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGG------DA--VLTPVSASWAF  233 (451)
T ss_dssp             HHHHHHHHHHHHHH-TCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC---------------CCEEEEE
T ss_pred             HHHHHHHHHHHHhc-CCCCCccccccccCchhhccccccccCCCccccccccCCCCCCC------CC--CCCCCCceEEE
Confidence            99999999999999 863221   258899974433   23343334444444322100      00  01235678999


Q ss_pred             EEeCHHHHHHHHHHcCCC----C-CcchHHHHHHHHHHHHHhhcCC-CCCCCeEEEEEEecccCcCCCCCCCCccccccc
Q 036687          246 LTFTPSQILHLKRQCVPS----L-KCTTFEALASHTWRSWVRSLDL-LPDSLNVKLLFSVNVRKKLNPEMPEGYYGNGFV  319 (432)
Q Consensus       246 ~~~~~~~l~~Lk~~~~~~----~-~~S~~d~l~A~lW~~~~~ar~~-~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~  319 (432)
                      |+|++++|++||+++.++    . ++|++|+|+||+|+|+++||.. +++++.+.+.++||+|+|++  +|.+|+||++.
T Consensus       234 f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~  311 (451)
T 2rkv_A          234 FTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQN  311 (451)
T ss_dssp             EEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEE
T ss_pred             EEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCccccee
Confidence            999999999999998754    2 6999999999999999999832 46788999999999999995  89999999999


Q ss_pred             ceecccchhhhccccHHHHHHHHHHHHHhcCHHH-HHHHHHHhhhcCCCC--------CCCCcEEEeecCCCCCCccccc
Q 036687          320 LACAQTSVNDLVNSNLYHTIKLVQQAKASLTDDY-VRSMVDLLEDKSYKT--------DLSSSLVISQWSKLGLEDLDFG  390 (432)
Q Consensus       320 ~~~~~~~~~~l~~~~l~~~A~~ir~~i~~~~~~~-v~~~~~~~~~~~~~p--------~~~~~~~~ssw~~~~~y~~DFG  390 (432)
                      .+.+.++++||.+.+|+++|.+||+++.++++++ +++.++|++..++..        ..+.++.+|||+++++|++|||
T Consensus       312 ~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG  391 (451)
T 2rkv_A          312 MTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFG  391 (451)
T ss_dssp             EEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTT
T ss_pred             eecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccccC
Confidence            9999999999999999999999999999998888 999999998854321        1245799999999999999998


Q ss_pred             --CCccceeeccc---cCeEEEEeccCCCCCcEEEEEecChhhhcCC
Q 036687          391 --EGKPMHMGPVT---SDIYCLFLPVTGDLNSTRVLVSMPEGVVEKF  432 (432)
Q Consensus       391 --~G~P~~v~~~~---~~g~~~ilp~~~~~~g~ev~v~L~~~~m~~f  432 (432)
                        ||+|.+++.+.   .+|.++++|. +++||++|.|+|++++|++|
T Consensus       392 ~gwG~P~~v~~~~~~~~~g~~~~~p~-~~~ggi~v~v~L~~~~m~~f  437 (451)
T 2rkv_A          392 LGLGKPETVRRPIFEPVESLMYFMPK-KPDGEFCAALSLRDEDMDRL  437 (451)
T ss_dssp             CSSCSCSEEECCBCSCCTTEEEECCC-CTTSCEEEEEEEEHHHHHHH
T ss_pred             CCCCCceEEEcCCccCCCCEEEEecC-CCCCCEEEEEEeCHHHHHHH
Confidence              79999998554   5789999985 45789999999999999986


No 6  
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.26  E-value=2.6e-09  Score=106.03  Aligned_cols=295  Identities=15%  Similarity=0.043  Sum_probs=169.2

Q ss_pred             CceeeCCccccccccc-cceeEEEEEeCCCcHHHHHHHHHhhcccccCCCeeEeeCCCCCCceEEEecCCCeE-EEEEEc
Q 036687           32 NHSLYLSNLDDQKFLR-FSIKYLYLYKKSISLDFLKYSLSKVLVEYYPLAGRLRTSSEDDFKLQVDCNGEGAV-FAAAFM  109 (432)
Q Consensus        32 ~~~~~Ls~lD~~~~~~-~~~~~~~~f~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~~~gv~-f~~a~~  109 (432)
                      ...+|||++.+.+... .++...+-+++..+.++|++++.+++.++|.|-.++...++  +.+++........ +.+.+.
T Consensus         5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~g~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~--~~~q~v~~~~~~~~~~~~d~   82 (422)
T 1q9j_A            5 SVIRKLSHSEEVFAQYEVFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSD--GGWNLVADDLLHSGICVIDG   82 (422)
T ss_dssp             SEEEECCHHHHHHHHTTCEEEEEEEEESCCCHHHHHHHHHHHHHHCGGGSEEEEECTT--SSEEEEECCSSSCCCEEEC-
T ss_pred             ceeecCCHHHHHHHhcCceEEEEEEEecCCCHHHHHHHHHHHHHhCccceEEEEecCC--cceeeeccCCCCCceEEEEC
Confidence            4578899888754322 23566666778899999999999999999999999987553  3344333322222 221111


Q ss_pred             cCChhhhhCCCCCchhhhhcccccccccCCCCCCCeEEEEEeeccCceeEecceeeeccchhhHHHHHHHHhhhhCC---
Q 036687          110 DISSEDFLQLSRKPNRSWRKLLYRVEAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHVTTK---  186 (432)
Q Consensus       110 ~~~~~~l~~~~~~~~~~~~~l~p~~~~~~~~~~Pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~---  186 (432)
                          .+...    .....+.    ....+ ...|++++.+.. .+++..|.+.+||.++||.|+..|++.|.+.++.   
T Consensus        83 ----~~~~~----~~~~~~~----~~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~  148 (422)
T 1q9j_A           83 ----TAATN----GSPSGNA----ELRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVT  148 (422)
T ss_dssp             -------------------C----CCCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCCc----chhhhcc----cCccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhc
Confidence                00000    0000010    11123 567999999877 7778999999999999999999999999998762   


Q ss_pred             -CCCCCCCCC--CCCc--CCCCCCC-----CCCCcCCCCCCCccccccchhhHHhhhhccCCCCceeEEEEeCHHHHHHH
Q 036687          187 -PNLDPPISP--FHTR--HVLKPRN-----PPQVNFTHHGYTKTTQNETAQVEVEINQYLQAQPLVPASLTFTPSQILHL  256 (432)
Q Consensus       187 -G~~~~~~~P--~~dr--~~l~~~~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L  256 (432)
                       |. +...+|  ..+-  .....+.     .+........|+............+. +...........+.++.+..++|
T Consensus       149 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~-~~~~~~~~~~~~~~l~~~~~~~l  226 (422)
T 1q9j_A          149 TGD-PGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLA-HPGLPQAVPVTRLWLSKQQTSDL  226 (422)
T ss_dssp             SSS-CCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC--------------CCSBCCCCEEEECCCHHHHHHH
T ss_pred             cCC-CCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCC-CCCCCCCccceEEEeCHHHHHHH
Confidence             33 222222  1110  0000000     00000001233221100000000000 01112234678889999999999


Q ss_pred             HHHcCCCCCcchHHHHHHHHHHHHHhhcCCCCCCCeEEEEEEecccCcCCCCCCCCcccccccceecccchhhhccccHH
Q 036687          257 KRQCVPSLKCTTFEALASHTWRSWVRSLDLLPDSLNVKLLFSVNVRKKLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLY  336 (432)
Q Consensus       257 k~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~l~  336 (432)
                      ++.|+..+ +|.++++.|.+-..+.+-+.  .......+.++++.|....|+++..=+.|.+++....+++.  .+.++.
T Consensus       227 ~~~a~~~~-~t~~~~l~aa~~~~l~r~~~--~~~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~--~~~~~~  301 (422)
T 1q9j_A          227 MAFGREHR-LSLNAVVAAAILLTEWQLRN--TPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIG--PNTDIV  301 (422)
T ss_dssp             HHHHTTTT-CCHHHHHHHHHHHHHHHHHT--CSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCC--SSCCHH
T ss_pred             HHHHHHhC-CCHHHHHHHHHHHHHHhccc--CCCceEEEeeeeecccccCCCCChhhhhhhheeeeeeeecc--CCCCHH
Confidence            99999875 99999999986555554321  34567899999999988765443111233333333333322  145677


Q ss_pred             HHHHHHHHHHHhc
Q 036687          337 HTIKLVQQAKASL  349 (432)
Q Consensus       337 ~~A~~ir~~i~~~  349 (432)
                      ++++.+++.+.+.
T Consensus       302 ~~l~~v~~~~~~~  314 (422)
T 1q9j_A          302 DLASDIVATLRAD  314 (422)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888887654


No 7  
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.80  E-value=4.5e-07  Score=91.94  Aligned_cols=293  Identities=12%  Similarity=-0.027  Sum_probs=163.6

Q ss_pred             CceeeCCccccccc------c--ccceeEEEEEeCCCcHHHHHHHHHhhcccccCCCeeEeeCCCCCCceEEEecCCCeE
Q 036687           32 NHSLYLSNLDDQKF------L--RFSIKYLYLYKKSISLDFLKYSLSKVLVEYYPLAGRLRTSSEDDFKLQVDCNGEGAV  103 (432)
Q Consensus        32 ~~~~~Ls~lD~~~~------~--~~~~~~~~~f~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~~~gv~  103 (432)
                      +..+|||+.-+-+.      +  ...+...+-+++..+.++|++++.+++.++|.|--++...+   |.+. ......+.
T Consensus        11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~A~~~lv~rh~~LRt~f~~~~---~~~~-~v~~~~~~   86 (493)
T 4hvm_A           11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGRIDDDRLAAAADEVLDAFPLLRVNFVDDD---GLWM-RTRENADA   86 (493)
T ss_dssp             -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESSCCHHHHHHHHHHHHHHCGGGGEEEEESS---SEEE-EECSCCCC
T ss_pred             CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCCCCHHHHHHHHHHHHHhchhceeEEEccC---CEEE-EecCCCCC
Confidence            56788887765221      1  12355666667789999999999999999999999998643   5554 33222255


Q ss_pred             EEEEEccC-Ch--hhhhCCCCCchhhhhcccccccccCCCCCCCeEEEEEeeccCceeEecceeeeccchhhHHHHHHHH
Q 036687          104 FAAAFMDI-SS--EDFLQLSRKPNRSWRKLLYRVEAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAW  180 (432)
Q Consensus       104 f~~a~~~~-~~--~~l~~~~~~~~~~~~~l~p~~~~~~~~~~Pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~w  180 (432)
                      +.+.+... +-  +++..       ........  ..+....|++++.+....++...|.+.+||.++||.|+..|++.+
T Consensus        87 ~~~~d~~~~~~~~~~~~~-------~~~~~~~~--~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l  157 (493)
T 4hvm_A           87 LVRSDLRGHPDPQARCVE-------LLRADRDR--PTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAV  157 (493)
T ss_dssp             EEEEECTTSSSHHHHHHH-------HHHHHHSS--CCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred             ceEEECCCCCchHHHHHH-------HHHHHhcC--CCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHH
Confidence            44443211 00  11110       01111110  123356699998887766777899999999999999999999999


Q ss_pred             hhhhCCCCCCCCCCCCCCcCCCCC-CC---CCCCcC-CCCCCCccccccchhhHHhhhhccCCCCceeEEEEeCHHHHHH
Q 036687          181 AHVTTKPNLDPPISPFHTRHVLKP-RN---PPQVNF-THHGYTKTTQNETAQVEVEINQYLQAQPLVPASLTFTPSQILH  255 (432)
Q Consensus       181 a~~~r~G~~~~~~~P~~dr~~l~~-~~---~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  255 (432)
                      .+.+. |...+  .+..|  .... +.   ...... ....|+... .....+..+..  ..........+.++.+..++
T Consensus       158 ~~~Y~-g~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~-l~~~~~l~~~~--~~~~~~~~~~~~l~~~~~~~  229 (493)
T 4hvm_A          158 WQAYY-GRFRP--AQYRD--FAEVADFHPLDRETVRVARHRWWSRR-LPALPVRGGDG--GPVGPPETSRLRVPGSRWQA  229 (493)
T ss_dssp             HHHHT-TCCCG--GGSBC--GGGTTTCCTTCSHHHHHHHHHHHHHH-GGGSCCCC---------CCEEEEEEEEHHHHHH
T ss_pred             HHHhC-CCCCC--cCHHH--HHHHHhhhhcccChhhHHHHHHHHHh-ccCCCCCCCCC--CCCCCCeeEEEEcCHHHHHH
Confidence            99997 86322  22111  1100 00   000000 000111000 00000000000  01112567889999999999


Q ss_pred             HHHHcCCCCCcc--hHHHHHHHHHHHHHhhcCCC-------CCCCeEEEEEEecccCcCCCCCCCCcccccccceecccc
Q 036687          256 LKRQCVPSLKCT--TFEALASHTWRSWVRSLDLL-------PDSLNVKLLFSVNVRKKLNPEMPEGYYGNGFVLACAQTS  326 (432)
Q Consensus       256 Lk~~~~~~~~~S--~~d~l~A~lW~~~~~ar~~~-------~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~  326 (432)
                      |++.|+..+ +|  .+.++.|.+-..+.+-+...       .......+.+++++|..  |. -.+.+|+++......+.
T Consensus       230 l~~~a~~~~-vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~--~~-~~~~vG~f~n~lplr~~  305 (493)
T 4hvm_A          230 LTEPGGPLG-GNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDH--LQ-LGSVVGPLTDRVVFGVD  305 (493)
T ss_dssp             HHCC-------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHH--TT-CCSBCSCCEEEEEEEEE
T ss_pred             HHHHHHHcC-CCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCC--cc-hhcCeEeeeceeEEEEe
Confidence            999998875 88  99999887544443330000       34567899999999965  22 24667777666555554


Q ss_pred             hhhhccccHHHHHHHHHHHHHhc
Q 036687          327 VNDLVNSNLYHTIKLVQQAKASL  349 (432)
Q Consensus       327 ~~~l~~~~l~~~A~~ir~~i~~~  349 (432)
                      .+...+.++.+++..+++.+...
T Consensus       306 ~~~~~~~t~~~~l~~v~~~~~~~  328 (493)
T 4hvm_A          306 LTGLREPSFRDLMSRTQAGFLDA  328 (493)
T ss_dssp             CTTCSSCBHHHHHHHHHHHHHHH
T ss_pred             cCCCcCCCHHHHHHHHHHHHHHH
Confidence            43222467888888888777543


No 8  
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.79  E-value=3e-07  Score=93.90  Aligned_cols=287  Identities=9%  Similarity=0.082  Sum_probs=166.4

Q ss_pred             CceeeCCccccccc--------cccc-eeEEEEEeCCCcHHHHHHHHHhhcccccCCCeeEeeCCCCCCce-EEEecCCC
Q 036687           32 NHSLYLSNLDDQKF--------LRFS-IKYLYLYKKSISLDFLKYSLSKVLVEYYPLAGRLRTSSEDDFKL-QVDCNGEG  101 (432)
Q Consensus        32 ~~~~~Ls~lD~~~~--------~~~~-~~~~~~f~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~-~i~~~~~g  101 (432)
                      ...+|||+.-+.+.        ...| +...+-+++..+.++|++++.+++.++|.|--++...+   |.+ ++......
T Consensus        94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~l~~A~~~lv~rh~~LRt~f~~~~---~~~~q~v~~~~~  170 (520)
T 2jgp_A           94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKLERTRVEAAFQRLIARHESLRTSFAVVN---GEPVQNIHEDVP  170 (520)
T ss_dssp             CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECCCHHHHHHHHHHHHHHCGGGGEEEEEET---TEEEEEECSCCC
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCCCHHHHHHHHHHHHHHhHhheeEEEeeC---CEEEEEECCCCC
Confidence            45789997654211        0123 66677777899999999999999999999999987643   443 22222222


Q ss_pred             eEEEEEEccCChhhhhCCCCCchhhhhcccccccccCCCCCCCeEEEEEeeccCceeEecceeeeccchhhHHHHHHHHh
Q 036687          102 AVFAAAFMDISSEDFLQLSRKPNRSWRKLLYRVEAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWA  181 (432)
Q Consensus       102 v~f~~a~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~~~~~Pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa  181 (432)
                      +.+...+.  +-+++..       ..+.. -  ...+....|++++.+....++...|.+.+||.++||.|+..|++.+.
T Consensus       171 ~~~~~~~~--~~~~~~~-------~~~~~-~--~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~  238 (520)
T 2jgp_A          171 FALAYSEV--TEEEARE-------LVSSL-V--QPFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWV  238 (520)
T ss_dssp             CCCEEEEC--CHHHHHH-------HHHHT-C--CCCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHH
T ss_pred             CceEEEeC--CHHHHHH-------HHHHh-c--CCCCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHH
Confidence            22222221  1111110       00000 0  01233457899888876667778999999999999999999999999


Q ss_pred             hhhCCCCCCCCCCCCC-C-----cCCCCCCCCCCCcCCCCCCCcc--ccccch-hhHHhhhhc-cCCCCceeEEEEeCHH
Q 036687          182 HVTTKPNLDPPISPFH-T-----RHVLKPRNPPQVNFTHHGYTKT--TQNETA-QVEVEINQY-LQAQPLVPASLTFTPS  251 (432)
Q Consensus       182 ~~~r~G~~~~~~~P~~-d-----r~~l~~~~~p~~~~~~~~~~~~--~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  251 (432)
                      +.+. |...+..++.+ |     +.....   +... ....|+..  ...... ....+.... ..........+.++.+
T Consensus       239 ~~Y~-~~~l~~~~~~~~d~~~~~~~~~~~---~~~~-~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~  313 (520)
T 2jgp_A          239 QLYQ-GDVLPELRIQYKDFAVWQQEFSQS---AAFH-KQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKA  313 (520)
T ss_dssp             HHHT-TCCCCCCSCCHHHHHHHHHHHTTS---HHHH-HHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHH
T ss_pred             HHHc-cCCCCCCCCCHHHHHHHHHHhhcC---hhhH-HHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHH
Confidence            9999 65211111111 0     000000   0000 00001000  000000 000000000 0112345678899999


Q ss_pred             HHHHHHHHcCCCCCcchHHHHHHHHHHHHHhhcCCCCCCCeEEEEEEecccCcCCCCCCCCcccccccceecccchhhhc
Q 036687          252 QILHLKRQCVPSLKCTTFEALASHTWRSWVRSLDLLPDSLNVKLLFSVNVRKKLNPEMPEGYYGNGFVLACAQTSVNDLV  331 (432)
Q Consensus       252 ~l~~Lk~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~  331 (432)
                      ..++|++.|+..+ +|.+.++.|.+-..+.+-    .......+.+++++|..  +.+ .+-+|+++......+....  
T Consensus       314 ~~~~l~~~a~~~~-~T~~~~l~aa~a~~L~~~----~~~~dv~~g~~~~gR~~--~~~-~~~vG~f~n~lplr~~~~~--  383 (520)
T 2jgp_A          314 LTEGLHQLAQATG-TTLYMVLLAAYNVLLAKY----AGQEDIIVGTPITGRSH--ADL-EPIVGMFVNTLAMRNKPQR--  383 (520)
T ss_dssp             HHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHH----HTCSCEEEEEEECCCCS--GGG-TTCCSCCCEEEEEEECCCT--
T ss_pred             HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHh----cCCCCeEEEeccCCCCc--hhh-hccEEeeeeeeeEEecCCC--
Confidence            9999999988664 899999988754444433    24567899999999965  222 4566777666554444322  


Q ss_pred             cccHHHHHHHHHHHHHh
Q 036687          332 NSNLYHTIKLVQQAKAS  348 (432)
Q Consensus       332 ~~~l~~~A~~ir~~i~~  348 (432)
                      +.++.++++.+++.+.+
T Consensus       384 ~~~~~~~l~~v~~~~~~  400 (520)
T 2jgp_A          384 EKTFSEFLQEVKQNALD  400 (520)
T ss_dssp             TSBHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHH
Confidence            46788888888887754


No 9  
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.62  E-value=8.3e-07  Score=88.31  Aligned_cols=272  Identities=12%  Similarity=-0.017  Sum_probs=154.1

Q ss_pred             eeEEEEEeCCCcHHHHHHHHHhhcccccCCCeeEeeCCCCCCceEEEecCCCeEEEEEEccCChhhhhCCCCCchhhhhc
Q 036687           50 IKYLYLYKKSISLDFLKYSLSKVLVEYYPLAGRLRTSSEDDFKLQVDCNGEGAVFAAAFMDISSEDFLQLSRKPNRSWRK  129 (432)
Q Consensus        50 ~~~~~~f~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~~  129 (432)
                      +...+-+++..+.++|++++.+++.++|.|--++...+   |  .+.. ...+.+.+.+.       .. ...+......
T Consensus        23 ~~~~~~l~g~ld~~~L~~A~~~lv~rh~~LRt~f~~~~---~--~v~~-~~~~~~~~~d~-------~~-~~~~~~~~~~   88 (436)
T 1l5a_A           23 VAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQG---E--LYWH-PFSPPIDYQDL-------SI-HLEAEPLAWR   88 (436)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCGGGGEEECTTC---C--EEEC-SSCCCCEEEEC-------TT-CTTHHHHHHH
T ss_pred             eeEEEEEeCCCCHHHHHHHHHHHHHHhheeEEEEEecC---C--eECC-CcCCCccEEeC-------CC-CCCHHHHHHH
Confidence            56667777889999999999999999999998887432   4  3322 22222222221       11 0000000111


Q ss_pred             cccc--ccccCCCCCCCeEEEEEeeccCceeEecceeeeccchhhHHHHHHHHhhhhCC---CCCCCCCCCCCCcCCCCC
Q 036687          130 LLYR--VEAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHVTTK---PNLDPPISPFHTRHVLKP  204 (432)
Q Consensus       130 l~p~--~~~~~~~~~Pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~---G~~~~~~~P~~dr~~l~~  204 (432)
                      ++-.  ....+....|++++.+....++...|.+.+||.++||.|+..|++.+.+.+..   |. ++..++..-++....
T Consensus        89 ~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~-~~~~~~~~~~~~~~~  167 (436)
T 1l5a_A           89 QIEQDLQRSSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQ-TPTAAFKPYQSYLEE  167 (436)
T ss_dssp             HHHHHHTSCCCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCCHHHHHHH
T ss_pred             HHHHHhcCCCCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCC-CCCCCccCHHHHHHH
Confidence            1100  01123356699988887666778999999999999999999999999998862   33 111111000000000


Q ss_pred             ----CCCCCCcCCCCCCCccccccchhhHHhhhh--ccCCCCceeEEEEeCHHHHHHHHHHcCCCCCcchHHHHHHHHHH
Q 036687          205 ----RNPPQVNFTHHGYTKTTQNETAQVEVEINQ--YLQAQPLVPASLTFTPSQILHLKRQCVPSLKCTTFEALASHTWR  278 (432)
Q Consensus       205 ----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~S~~d~l~A~lW~  278 (432)
                          ...... .....|+... .....+...++.  ...........+.++.+..++|++.|+..+ +|.+.++.|.+-.
T Consensus       168 ~~~~~~~~~~-~~~~~~W~~~-l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~-~t~~~~l~aa~~~  244 (436)
T 1l5a_A          168 EAAYLTSHRY-WQDKQFWQGY-LREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANANQ-IGWPDALVALCAL  244 (436)
T ss_dssp             HHHHHTSHHH-HHHHHHHHHH-HHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHTT-CCHHHHHHHHHHH
T ss_pred             HHHhhccHhH-HHHHHHHHHH-hcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHhC-CCHHHHHHHHHHH
Confidence                000000 0000010000 000000000000  001123457788999999999999998765 9999999887433


Q ss_pred             HHHhhcCCCCCCCeEEEEEEecccCcCCCCCCCCcccccccceecccchhhhccccHHHHHHHHHHHHHhc
Q 036687          279 SWVRSLDLLPDSLNVKLLFSVNVRKKLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTIKLVQQAKASL  349 (432)
Q Consensus       279 ~~~~ar~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~~i~~~  349 (432)
                      .+.+    ... ....+.+++++|..  +. -.+-+|+++......+....  +.++.+++..+++.+.+.
T Consensus       245 ~L~~----~~g-~dv~ig~~~~~R~~--~~-~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~~  305 (436)
T 1l5a_A          245 YLES----AEP-DAPWLWLPFMNRWG--SV-AANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRSL  305 (436)
T ss_dssp             HHHH----HST-TCCEEEEEECCCTT--SG-GGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHHH
T ss_pred             HHHH----hhC-CceEEeeecccCCC--hH-HhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHHH
Confidence            3332    235 77899999999964  22 24556776655544444321  457888888888877653


No 10 
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.47  E-value=4.9e-05  Score=76.05  Aligned_cols=295  Identities=11%  Similarity=0.079  Sum_probs=164.1

Q ss_pred             CceeeCCccccccc------cccc-eeEEEEEeCCCcHHHHHHHHHhhcccccCCCeeEeeCCCCCCce-EEEec--CCC
Q 036687           32 NHSLYLSNLDDQKF------LRFS-IKYLYLYKKSISLDFLKYSLSKVLVEYYPLAGRLRTSSEDDFKL-QVDCN--GEG  101 (432)
Q Consensus        32 ~~~~~Ls~lD~~~~------~~~~-~~~~~~f~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~-~i~~~--~~g  101 (432)
                      ...++||+..+++.      ...| +..++-++...+.+.|+++|.+++.+.+.|--++....   |.+ ++...  ...
T Consensus        15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~Al~~lv~rh~~LRt~f~~~~---~~~~q~v~~~~~~~   91 (466)
T 2xhg_A           15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGFDPKVIQSVMDKIIEHHDALRMVYQHEN---GNVVQHNRGLGGQL   91 (466)
T ss_dssp             CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCCCHHHHHHHHHHHHHHSGGGGEEEECGG---GCCEEEECCSSSCC
T ss_pred             CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCCCHHHHHHHHHHHHHhChHhheEEecCC---Cceeeecccccccc
Confidence            45678887665221      1123 44445556789999999999999999999999988543   433 33222  123


Q ss_pred             eEEEEEEccC--ChhhhhCCCCCchhhhhcccccccccCCCCCCCeEEEEEeeccCceeEecceeeeccchhhHHHHHHH
Q 036687          102 AVFAAAFMDI--SSEDFLQLSRKPNRSWRKLLYRVEAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHA  179 (432)
Q Consensus       102 v~f~~a~~~~--~~~~l~~~~~~~~~~~~~l~p~~~~~~~~~~Pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~  179 (432)
                      +.+.+.+...  ..++...      ...+. .  ....+....|++++.+....++.. |-+.+||.++||.|+..|++.
T Consensus        92 ~~~~~~d~~~~~~~~~~~~------~~~~~-~--~~~fdl~~~pl~r~~l~~~~~~~~-l~l~~HH~i~Dg~S~~~l~~e  161 (466)
T 2xhg_A           92 YDFFSYNLTAQPDVQQAIE------AETQR-L--HSSMNLQEGPLVKVALFQTLHGDH-LFLAIHHLVVDGISWRILFED  161 (466)
T ss_dssp             CEEEEEECTTCSCHHHHHH------HHHHH-H--HTTCCTTTCCCEEEEEEEETTEEE-EEEEEEGGGCCHHHHHHHHHH
T ss_pred             ceeEEEecCCcccHHHHHH------HHHHH-H--HhccCCCCCCeEEEEEEEcCCCCE-EEEEeeeeeechhhHHHHHHH
Confidence            3443333211  1111100      00000 0  011234567999988876666555 679999999999999999999


Q ss_pred             HhhhhCC---CCCCCCCCC--CCCcCCCC---C-CCCCCCcCCCCCCCccccccchhhHHhhhh----c-cCCCCceeEE
Q 036687          180 WAHVTTK---PNLDPPISP--FHTRHVLK---P-RNPPQVNFTHHGYTKTTQNETAQVEVEINQ----Y-LQAQPLVPAS  245 (432)
Q Consensus       180 wa~~~r~---G~~~~~~~P--~~dr~~l~---~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~  245 (432)
                      +.+.+..   |. ++..+|  ..-++...   . ...+.. .....|+... .. ..+...++.    . ..........
T Consensus       162 l~~~Y~~~~~g~-~~~l~~~~~~y~~~~~~~~~~~~~~~~-~~~~~~W~~~-l~-~~~~~~lp~~~~~~~~~~~~~~~~~  237 (466)
T 2xhg_A          162 LATGYAQALAGQ-AISLPEKTDSFQSWSQWLQEYANEADL-LSEIPYWESL-ES-QAKNVSLPKDYEVTDCKQKSVRNMR  237 (466)
T ss_dssp             HHHHHHHHHTTC-CCCCCCCCSCHHHHHHHHHHHTTSHHH-HTTHHHHHHH-HH-HCCCCCCCCSSCCSSCBGGGEEEEE
T ss_pred             HHHHHHHHHcCC-CCCCCCCCCCHHHHHHHHHHHhcCccc-hhhhHHHHHh-hc-cCCcccCCccccccccccccceEEE
Confidence            9988751   43 211221  00000000   0 000000 0000110000 00 000000000    0 0111245678


Q ss_pred             EEeCHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHhhcCCCCCCCeEEEEEEecccCcCCC-CCCCCcccccccceecc
Q 036687          246 LTFTPSQILHLKRQCVPSLKCTTFEALASHTWRSWVRSLDLLPDSLNVKLLFSVNVRKKLNP-EMPEGYYGNGFVLACAQ  324 (432)
Q Consensus       246 ~~~~~~~l~~Lk~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~l~~~vd~R~rl~p-~lp~~Y~GN~~~~~~~~  324 (432)
                      +.++++..++|++.+.....+|.++++.|.+-..+.+-.    ......+.+++++|....+ +--.+-+|+++......
T Consensus       238 ~~l~~~~~~~l~~~~~~~~~~t~~~~llaa~~~~l~~~~----~~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lplr  313 (466)
T 2xhg_A          238 IRLHPEETEQLLKHANQAYQTEINDLLLAALGLAFAEWS----KLAQIVIHLEGHGREDIIEQANVARTVGWFTSQYPVL  313 (466)
T ss_dssp             EECCHHHHHHHHHTGGGTTTCCHHHHHHHHHHHHHHHHH----CCSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEEEE
T ss_pred             EEcCHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHh----CCCceEEEecCCCCCccccCCCccccccceeeeccEE
Confidence            899999999999887533248999999887554544432    4567899999999976421 11245667766555444


Q ss_pred             cchhhhccccHHHHHHHHHHHHHhc
Q 036687          325 TSVNDLVNSNLYHTIKLVQQAKASL  349 (432)
Q Consensus       325 ~~~~~l~~~~l~~~A~~ir~~i~~~  349 (432)
                      +....  +.++.++++.|++.+..+
T Consensus       314 ~~~~~--~~~~~~~l~~v~~~~~~~  336 (466)
T 2xhg_A          314 LDLKQ--TAPLSDYIKLTKENMRKI  336 (466)
T ss_dssp             EECSC--CCSHHHHHHHHHHHHHHS
T ss_pred             EecCC--CCCHHHHHHHHHHHHHhC
Confidence            43321  467899999999998876


No 11 
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.45  E-value=4.8e-06  Score=94.39  Aligned_cols=278  Identities=10%  Similarity=0.012  Sum_probs=160.2

Q ss_pred             eeEEEEEeCCCcHHHHHHHHHhhcccccCCCeeEeeCCCCCC-ceEEEecCCCeEEEEEEcc-CChhhhhCCCCCchhhh
Q 036687           50 IKYLYLYKKSISLDFLKYSLSKVLVEYYPLAGRLRTSSEDDF-KLQVDCNGEGAVFAAAFMD-ISSEDFLQLSRKPNRSW  127 (432)
Q Consensus        50 ~~~~~~f~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g-~~~i~~~~~gv~f~~a~~~-~~~~~l~~~~~~~~~~~  127 (432)
                      +...+-+++..+.++|++|+.+++.+.+.|--++.....  | ..++......+.+.+.+.. .+-.+-       ....
T Consensus        37 ~~~~~~l~g~ld~~~l~~A~~~lv~rH~~LRt~f~~~~~--~~p~Q~v~~~~~~~~~~~d~~~~~~~~~-------~~~~  107 (1304)
T 2vsq_A           37 EQITMKVKGSLNIKCLEESMNVIMDRYDVFRTVFIHEKV--KRPVQVVLKKRQFHIEEIDLTHLTGSEQ-------TAKI  107 (1304)
T ss_dssp             EEEEEEEEECCCHHHHHHHHHHHHHHCGGGGEEEECSSC--SSCEEEEESCCCCCEEEEECTTSCHHHH-------HHHH
T ss_pred             EEEEEEEcCCcCHHHHHHHHHHHHHhhhhceEEEEEcCC--CeEEEEECCCCCCceEEEECCCCCchhH-------HHHH
Confidence            566666778899999999999999999999999876543  3 3444444333343333221 110000       0001


Q ss_pred             hccccc--ccccCCCCCCCeEEEEEeeccCceeEecceeeeccchhhHHHHHHHHhhhhCC---CCCCCCCCCC-CCcCC
Q 036687          128 RKLLYR--VEAHSFLQVPPLVVQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAHVTTK---PNLDPPISPF-HTRHV  201 (432)
Q Consensus       128 ~~l~p~--~~~~~~~~~Pll~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~---G~~~~~~~P~-~dr~~  201 (432)
                      ..+.-.  ....+....|++++.+....++...|.+.+||.++||.|+..+++.+.+.+..   |. ++..+|. .-++.
T Consensus       108 ~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~-~~~l~~~~~y~d~  186 (1304)
T 2vsq_A          108 NEYKEQDKIRGFDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQK-PYSLPPVKPYKDY  186 (1304)
T ss_dssp             HHHHHHHHHHCCCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTC-CCCCCCCCCTHHH
T ss_pred             HHHHHHHhcCCCCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCC-CCCCCCcccHHHH
Confidence            111100  00123456799999987777778899999999999999999999999988762   33 2112221 00010


Q ss_pred             CCCCCCCCCcCCCCCCCcc--ccccchhhHHhhhh----ccCCCCceeEEEEeCHHHHHHHHHHcCCCCCcchHHHHHHH
Q 036687          202 LKPRNPPQVNFTHHGYTKT--TQNETAQVEVEINQ----YLQAQPLVPASLTFTPSQILHLKRQCVPSLKCTTFEALASH  275 (432)
Q Consensus       202 l~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~S~~d~l~A~  275 (432)
                      .......... ....|+..  ....   ....++.    ...........+.++++..++||+.|+..+ +|.+.++.|.
T Consensus       187 ~~~~~~~~~~-~~~~yW~~~L~~~~---~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~-~T~~~vllaa  261 (1304)
T 2vsq_A          187 IKWLEKQDKQ-ASLRYWREYLEGFE---GQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQH-TTLSTALQAV  261 (1304)
T ss_dssp             HHHHHTSCHH-HHHHHHHHHHTTCC---CCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHTT-CCHHHHHHHH
T ss_pred             HHHHhcchhh-HHHHHHHHHhCCCC---ccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHcC-CCHHHHHHHH
Confidence            0000000000 00011100  0000   0000000    001123456778899999999999998775 9999999887


Q ss_pred             HHHHHHhhcCCCCCCCeEEEEEEecccCcCCCCCCCCcccccccceecccchhhhccccHHHHHHHHHHHHHhc
Q 036687          276 TWRSWVRSLDLLPDSLNVKLLFSVNVRKKLNPEMPEGYYGNGFVLACAQTSVNDLVNSNLYHTIKLVQQAKASL  349 (432)
Q Consensus       276 lW~~~~~ar~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~~i~~~  349 (432)
                      +-..+.+-    .......+.++++.|..-.+.+ ++-+|+++.........+  .+.++.++...+++...+.
T Consensus       262 ~a~~L~r~----tg~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~--~~~s~~~ll~~v~~~~~~a  328 (1304)
T 2vsq_A          262 WSVLISRY----QQSGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLS--EGITFNGLLKRLQEQSLQS  328 (1304)
T ss_dssp             HHHHHHHH----HTCSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECC--TTCBHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHh----cCCCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCC--CCCcHHHHHHHHHHHHHHh
Confidence            43333332    3456789999999997532332 455666665554444332  1467888888888877553


No 12 
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.73  E-value=0.00029  Score=71.43  Aligned_cols=149  Identities=9%  Similarity=0.025  Sum_probs=91.1

Q ss_pred             ceeEEEEeCHHHHHHHHHHcCCC---CCcchHHHHHHHHHHHHHhhcCC--CCCCCeEEEEEEecccCcCCCCCCCCccc
Q 036687          241 LVPASLTFTPSQILHLKRQCVPS---LKCTTFEALASHTWRSWVRSLDL--LPDSLNVKLLFSVNVRKKLNPEMPEGYYG  315 (432)
Q Consensus       241 ~~~~~~~~~~~~l~~Lk~~~~~~---~~~S~~d~l~A~lW~~~~~ar~~--~~~~~~~~l~~~vd~R~rl~p~lp~~Y~G  315 (432)
                      -....+.|++++.++|++.|++.   + +|.+.+|.|.+-.++.+....  ..........++||+|+.+.++.-.+|+|
T Consensus       277 ~~~~~~~ls~~~t~~L~~~ck~~~~~g-~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~  355 (519)
T 3fot_A          277 PRCVIHKLSADESIDIVKAVKTRLGPG-FTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYA  355 (519)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHTCTT-CCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCS
T ss_pred             cceEEEEcCHHHHHHHHHHHHhcCCCC-eeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccc
Confidence            44578899999999999999986   5 999999988776665553210  12234678999999999997655557788


Q ss_pred             ccccceecccch----------hhhccc-cHHHHHHHHHHHHHhc-CHHHHHH--------HHHHhhhcCCCCCCCCcEE
Q 036687          316 NGFVLACAQTSV----------NDLVNS-NLYHTIKLVQQAKASL-TDDYVRS--------MVDLLEDKSYKTDLSSSLV  375 (432)
Q Consensus       316 N~~~~~~~~~~~----------~~l~~~-~l~~~A~~ir~~i~~~-~~~~v~~--------~~~~~~~~~~~p~~~~~~~  375 (432)
                      .+........+.          +|+.+. .+.++|+.+++..... ++.+++.        .+.++......+.......
T Consensus       356 ~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~~~~tp~  435 (519)
T 3fot_A          356 MCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPL  435 (519)
T ss_dssp             CCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCSBCCCE
T ss_pred             eeeeeeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCCCccCcc
Confidence            876654332211          111111 1577788888866652 3223332        2233433211111234678


Q ss_pred             EeecCCCCCC-ccccc
Q 036687          376 ISQWSKLGLE-DLDFG  390 (432)
Q Consensus       376 ~ssw~~~~~y-~~DFG  390 (432)
                      +||..++.=| .-++|
T Consensus       436 lSslG~vd~~lp~~y~  451 (519)
T 3fot_A          436 FISDGINERFIPHEIK  451 (519)
T ss_dssp             EEEEEEGGGTSCSEEE
T ss_pred             cccCCccccccchhhc
Confidence            8888877622 33455


No 13 
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=67.72  E-value=2.8  Score=36.75  Aligned_cols=44  Identities=16%  Similarity=0.423  Sum_probs=32.0

Q ss_pred             CCCeEEEEEeeccCc--eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          142 VPPLVVQVTNLRCGG--MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       142 ~Pll~vqvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      .|++.+--..-.+|.  +-|++++||.++||.-...|++.+.+.+.
T Consensus       164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le  209 (213)
T 3cla_A          164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN  209 (213)
T ss_dssp             SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred             ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence            477653211111333  67899999999999999999999988765


No 14 
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=66.58  E-value=3.1  Score=36.63  Aligned_cols=28  Identities=25%  Similarity=0.310  Sum_probs=25.2

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhh
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVT  184 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~  184 (432)
                      +-|++++||.++||.-...|++.+.+.+
T Consensus       189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l  216 (217)
T 2i9d_A          189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL  216 (217)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence            6789999999999999999999998754


No 15 
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=65.61  E-value=3.3  Score=36.50  Aligned_cols=44  Identities=18%  Similarity=0.369  Sum_probs=31.8

Q ss_pred             CCCeEEEEEeeccCc--eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          142 VPPLVVQVTNLRCGG--MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       142 ~Pll~vqvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      .|++.+--..-.+|.  +-|++++||.+.||.-...|++.+.+.+.
T Consensus       168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le  213 (219)
T 1q23_A          168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD  213 (219)
T ss_dssp             SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred             eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence            476653221112332  67899999999999999999999988754


No 16 
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=63.04  E-value=4.2  Score=36.35  Aligned_cols=29  Identities=21%  Similarity=0.324  Sum_probs=26.7

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      +-|+++++|.++||.-...|++.+.+.+.
T Consensus       204 m~lsls~DHRviDGa~aa~Fl~~lk~~le  232 (239)
T 3b8k_A          204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE  232 (239)
T ss_dssp             EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence            67999999999999999999999988765


No 17 
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=61.14  E-value=3.9  Score=36.17  Aligned_cols=29  Identities=28%  Similarity=0.413  Sum_probs=27.0

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      +-|+++++|.+.||.-...|++.+.+.+.
T Consensus       187 m~lsls~DHRviDGa~aa~Fl~~l~~~le  215 (224)
T 3rqc_A          187 MYLSLSCDHRLIDGAVATRFIVDLKKVIE  215 (224)
T ss_dssp             CCEEEEEETTTSCHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeccceecHHHHHHHHHHHHHHHh
Confidence            55899999999999999999999999887


No 18 
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=60.35  E-value=4.6  Score=36.15  Aligned_cols=29  Identities=10%  Similarity=0.249  Sum_probs=26.6

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      +-|+++++|.+.||.-...|++.+.+.+.
T Consensus       208 m~lsls~DHRviDGa~aa~Fl~~lk~~le  236 (243)
T 1dpb_A          208 LPLSLSYDCRVINGAAAARFTKRLGDLLA  236 (243)
T ss_dssp             EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence            57999999999999999999999998765


No 19 
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=60.25  E-value=4.7  Score=35.87  Aligned_cols=29  Identities=28%  Similarity=0.368  Sum_probs=26.7

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      +-|+++++|.+.||.-...|++.+.+.+.
T Consensus       196 m~lsls~DHRviDGa~aa~Fl~~lk~~le  224 (233)
T 1scz_A          196 MYLALSYDHRLIDGRESVGFLVTIKELLE  224 (233)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence            56999999999999999999999998776


No 20 
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=58.34  E-value=5.2  Score=36.26  Aligned_cols=29  Identities=24%  Similarity=0.426  Sum_probs=26.5

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      +-|+++++|.+.||.-...|++.+.+.+.
T Consensus       224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le  252 (262)
T 2ii3_A          224 MNVSWSADHRIIDGATVSRFSNLWKSYLE  252 (262)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence            56899999999999999999999998765


No 21 
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=51.68  E-value=7.9  Score=34.94  Aligned_cols=29  Identities=31%  Similarity=0.540  Sum_probs=26.9

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      +-|+++++|-+.||.-...|++.+.+.+.
T Consensus       210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le  238 (256)
T 3mae_A          210 VNLCLSIDHRILDGLLAGKFLQAIKANVE  238 (256)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEccccccHHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999877


No 22 
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=50.34  E-value=8.5  Score=34.57  Aligned_cols=29  Identities=24%  Similarity=0.433  Sum_probs=26.8

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      +-|+++++|-+.||.-...|++.+.+.+.
T Consensus       205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le  233 (250)
T 3l60_A          205 MTLTCVFDHRVVDGAQVAQFMCELRDLIE  233 (250)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecccccCHHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999876


No 23 
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=44.83  E-value=13  Score=19.59  Aligned_cols=18  Identities=28%  Similarity=0.486  Sum_probs=15.1

Q ss_pred             CcchHHHHHHHHHHHHHh
Q 036687          265 KCTTFEALASHTWRSWVR  282 (432)
Q Consensus       265 ~~S~~d~l~A~lW~~~~~  282 (432)
                      -+|+.|-|+-++|+.+..
T Consensus         7 vftsqdylsdhlwralna   24 (26)
T 2xl1_A            7 VFTSQDYLSDHLWRALNA   24 (26)
T ss_pred             eeecHHHHHHHHHHHHhc
Confidence            368899999999998764


No 24 
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=37.18  E-value=36  Score=23.14  Aligned_cols=39  Identities=13%  Similarity=0.228  Sum_probs=30.6

Q ss_pred             CCcHHHHHHHHHhhcccccCCCeeEeeCCCCCCceEEEec
Q 036687           59 SISLDFLKYSLSKVLVEYYPLAGRLRTSSEDDFKLQVDCN   98 (432)
Q Consensus        59 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~   98 (432)
                      .++.+.+.++|...+.+-..+||.+...-+ .+.++|...
T Consensus         9 gddleafekalkemirqarkfagtvtytld-gndleirit   47 (85)
T 2kl8_A            9 GDDLEAFEKALKEMIRQARKFAGTVTYTLD-GNDLEIRIT   47 (85)
T ss_dssp             CSSHHHHHHHHHHHHHHHTTTTCEEEEEEC-SSCEEEEEE
T ss_pred             CCcHHHHHHHHHHHHHHHHhhcceEEEEec-CCeeEEEEe
Confidence            456888999999999999999999987654 145777764


No 25 
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=36.69  E-value=7.3  Score=38.04  Aligned_cols=29  Identities=17%  Similarity=0.332  Sum_probs=0.0

Q ss_pred             eeEecceeeeccchhhHHHHHHHHhhhhC
Q 036687          157 MILCTAINHCLCDGIGTSQFLHAWAHVTT  185 (432)
Q Consensus       157 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  185 (432)
                      +-|+++++|.+.||.-...|++.+.+.+.
T Consensus       391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le  419 (428)
T 3dva_I          391 LALSLSFDHRMIDGATAQKALNHIKRLLS  419 (428)
T ss_dssp             -----------------------------
T ss_pred             EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence            35899999999999999999999988776


No 26 
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=31.10  E-value=97  Score=20.08  Aligned_cols=43  Identities=5%  Similarity=0.064  Sum_probs=35.5

Q ss_pred             CceeEEEEeCHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHhh
Q 036687          240 PLVPASLTFTPSQILHLKRQCVPSLKCTTFEALASHTWRSWVRS  283 (432)
Q Consensus       240 ~~~~~~~~~~~~~l~~Lk~~~~~~~~~S~~d~l~A~lW~~~~~a  283 (432)
                      +.....+++|.+--++|+..|..++ .|.|.-+...+-+++-+.
T Consensus         6 ~~~~~~lRlp~eL~~~l~~~A~~~g-rS~N~~i~~~L~~~l~~~   48 (53)
T 1baz_A            6 KMPQVNLRWPREVLDLVRKVAEENG-RSVNSEIYQRVMESFKKE   48 (53)
T ss_dssp             CSCEEEEECCHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHT
T ss_pred             cCCeeEEECCHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHhhc
Confidence            4566789999999999999999886 899988888887766543


No 27 
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=28.38  E-value=96  Score=21.57  Aligned_cols=45  Identities=2%  Similarity=-0.112  Sum_probs=37.8

Q ss_pred             CceeEEEEeCHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHhhcC
Q 036687          240 PLVPASLTFTPSQILHLKRQCVPSLKCTTFEALASHTWRSWVRSLD  285 (432)
Q Consensus       240 ~~~~~~~~~~~~~l~~Lk~~~~~~~~~S~~d~l~A~lW~~~~~ar~  285 (432)
                      ......+++|.+--++|+..|..++ .|.|.-|.+.|-+.+..-..
T Consensus        18 ~~~kf~LRlP~eL~~~L~~~A~~~g-rSlNaeIv~~Le~sl~~e~~   62 (69)
T 3qoq_A           18 TADKFVVRLPEGMREQIAEVARSHH-RSMNSEIIARLEQSLLQEGA   62 (69)
T ss_dssp             TSEEEEEECCTTHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHTC
T ss_pred             cCCceEEECCHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHcCC
Confidence            4567799999999999999999886 99999999998888765443


No 28 
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=24.32  E-value=1.4e+02  Score=18.89  Aligned_cols=42  Identities=5%  Similarity=-0.239  Sum_probs=33.6

Q ss_pred             CCceeEEEEeCHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHH
Q 036687          239 QPLVPASLTFTPSQILHLKRQCVPSLKCTTFEALASHTWRSWV  281 (432)
Q Consensus       239 ~~~~~~~~~~~~~~l~~Lk~~~~~~~~~S~~d~l~A~lW~~~~  281 (432)
                      +......++++.+..+.|...|...+ .|..++|.-.+-..+.
T Consensus         7 ~~~~~i~vrl~~el~~~l~~~a~~~g-~s~s~~ir~ai~~~l~   48 (55)
T 2k9i_A            7 LNGIKLGVYIPQEWHDRLMEIAKEKN-LTLSDVCRLAIKEYLD   48 (55)
T ss_dssp             TCCEEEEEEECHHHHHHHHHHHHHHT-CCHHHHHHHHHHHHHH
T ss_pred             CccceEEEEcCHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHH
Confidence            34567799999999999999998765 7999888877655544


No 29 
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=23.80  E-value=1.5e+02  Score=18.95  Aligned_cols=23  Identities=22%  Similarity=0.202  Sum_probs=19.5

Q ss_pred             eeEEEEeCHHHHHHHHHHcCCCC
Q 036687          242 VPASLTFTPSQILHLKRQCVPSL  264 (432)
Q Consensus       242 ~~~~~~~~~~~l~~Lk~~~~~~~  264 (432)
                      ....|+||+++-+.|++.|.++.
T Consensus         2 ~~Vs~Y~SkEey~~L~klA~eE~   24 (55)
T 1x93_A            2 RAVSLYFSDEQYQKLEKMANEEE   24 (55)
T ss_dssp             EEEEEEECHHHHHHHHHHHHHTT
T ss_pred             ceEEEEecHHHHHHHHHHHHHHH
Confidence            35689999999999999998654


No 30 
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=21.43  E-value=1e+02  Score=18.69  Aligned_cols=36  Identities=8%  Similarity=0.004  Sum_probs=29.0

Q ss_pred             eEEEEeCHHHHHHHHHHcCCCCCcchHHHHHHHHHHH
Q 036687          243 PASLTFTPSQILHLKRQCVPSLKCTTFEALASHTWRS  279 (432)
Q Consensus       243 ~~~~~~~~~~l~~Lk~~~~~~~~~S~~d~l~A~lW~~  279 (432)
                      ...++++.+.+++|.+.+...+ .|..+++...+-..
T Consensus         4 ritv~l~~~l~~~Ld~~a~~~g-~srS~~ir~ai~~~   39 (45)
T 2cpg_A            4 RLTITLSESVLENLEKMAREMG-LSKSAMISVALENY   39 (45)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHHT-CCHHHHHHHHHHHH
T ss_pred             eEEEecCHHHHHHHHHHHHHHC-cCHHHHHHHHHHHH
Confidence            4579999999999999998765 78888887766443


Done!