Query 036689
Match_columns 595
No_of_seqs 206 out of 2481
Neff 9.8
Searched_HMMs 13730
Date Mon Mar 25 07:05:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036689.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036689hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.8 1E-16 7.5E-21 162.4 26.7 58 441-512 325-382 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.7 1.6E-16 1.1E-20 161.1 27.4 81 45-142 41-121 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.6 6.3E-14 4.6E-18 136.9 22.7 108 444-565 170-284 (305)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.6 8.4E-14 6.1E-18 136.0 23.5 58 78-140 31-88 (305)
5 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 1.2E-12 8.6E-17 130.1 26.2 249 223-561 98-352 (353)
6 d2astb2 c.10.1.3 (B:2136-2419) 99.5 2.7E-15 2E-19 145.0 6.0 64 249-321 172-235 (284)
7 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 8E-14 5.8E-18 136.7 16.3 129 226-399 177-305 (313)
8 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 9.6E-14 7E-18 136.1 16.9 261 15-352 38-306 (313)
9 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 7.9E-12 5.7E-16 124.0 27.1 95 22-143 38-132 (353)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.4 1.2E-12 8.4E-17 125.0 16.9 176 48-322 31-206 (266)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 1.8E-12 1.3E-16 125.0 17.5 85 48-142 32-116 (284)
12 d1p9ag_ c.10.2.7 (G:) von Will 99.4 1.8E-12 1.3E-16 123.7 17.3 197 222-481 9-205 (266)
13 d2astb2 c.10.1.3 (B:2136-2419) 99.4 1.8E-14 1.3E-18 139.1 3.2 189 250-513 44-235 (284)
14 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 5.2E-12 3.8E-16 121.6 19.9 205 223-482 32-236 (284)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 4.3E-12 3.1E-16 117.9 16.0 188 45-319 38-225 (227)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.3 2.4E-11 1.7E-15 112.7 17.3 188 20-287 39-226 (227)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 5.9E-11 4.3E-15 111.1 19.1 103 226-347 11-113 (242)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 8.8E-11 6.4E-15 109.9 18.6 85 223-321 29-113 (242)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.3 2.3E-11 1.7E-15 111.3 14.0 81 45-142 43-123 (210)
20 d2omxa2 c.10.2.1 (A:37-235) In 99.2 3.2E-11 2.3E-15 109.3 13.8 81 45-142 37-117 (199)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.2 9.5E-11 6.9E-15 107.1 14.9 102 20-142 44-145 (210)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.2 1.2E-10 8.7E-15 105.4 14.8 57 222-289 39-95 (199)
23 d1a9na_ c.10.2.4 (A:) Spliceso 98.9 1.7E-09 1.2E-13 93.9 8.8 62 222-289 62-123 (162)
24 d1dcea3 c.10.2.2 (A:444-567) R 98.9 6.5E-09 4.7E-13 85.6 10.5 99 25-140 1-99 (124)
25 d1a9na_ c.10.2.4 (A:) Spliceso 98.8 4.8E-09 3.5E-13 90.9 9.4 133 19-173 15-147 (162)
26 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.8 8.2E-09 5.9E-13 92.4 11.0 109 22-142 29-137 (192)
27 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.7 3E-10 2.2E-14 116.6 -2.9 116 22-142 2-123 (460)
28 d1dcea3 c.10.2.2 (A:444-567) R 98.7 2.6E-08 1.9E-12 81.8 9.4 120 2-136 1-122 (124)
29 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.7 7.3E-08 5.4E-12 85.9 11.7 129 226-398 11-139 (192)
30 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.6 2.2E-09 1.6E-13 109.8 -0.4 115 2-120 5-126 (460)
31 d1m9la_ c.10.3.1 (A:) Outer ar 98.5 1.6E-09 1.2E-13 97.4 -4.2 111 15-142 41-151 (198)
32 d1m9la_ c.10.3.1 (A:) Outer ar 98.3 2.8E-08 2.1E-12 89.0 -0.6 59 223-289 93-151 (198)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 98.2 2.3E-06 1.7E-10 72.9 10.1 105 24-142 10-114 (156)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 5.7E-08 4.2E-12 95.4 -0.9 122 221-348 184-313 (344)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 98.2 2.5E-06 1.8E-10 72.7 9.7 106 224-348 9-114 (156)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.0 4E-07 2.9E-11 89.1 1.1 41 221-262 91-131 (344)
37 d1koha1 c.10.2.3 (A:201-362) m 95.6 0.00085 6.2E-08 56.8 -0.4 85 45-137 62-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 95.2 0.0022 1.6E-07 54.1 1.0 84 443-535 63-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 95.1 0.0065 4.7E-07 51.3 3.8 38 104-141 14-54 (167)
40 d1io0a_ c.10.1.1 (A:) Tropomod 94.5 0.011 8.4E-07 49.6 3.7 38 104-141 16-56 (166)
41 d1pgva_ c.10.1.1 (A:) Tropomod 93.0 0.018 1.3E-06 48.3 2.3 15 222-236 43-57 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 87.0 0.11 8.4E-06 43.0 2.0 41 221-262 44-84 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1e-16 Score=162.43 Aligned_cols=58 Identities=14% Similarity=0.184 Sum_probs=41.1
Q ss_pred ccccCCccEEeEeCCCCCcccccchHHhhcccccEEEEcCcccccchhcccCccccccccccccccceeccc
Q 036689 441 SVSFRNLKILEVSGCKKLTNLVASSAAQSLVALVKMQVFGCRAMTQVVKSEGNQLAREEIVFNKLKMLSLLD 512 (595)
Q Consensus 441 ~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~i~~~~~~~~~~~~~~l~~L~~L~l~~ 512 (595)
+..+++|+.|++++| .+++++ .++.+++|++|++++|. +++++. .. .+++|+.|++++
T Consensus 325 l~~l~~L~~L~L~~n-~l~~l~---~l~~l~~L~~L~l~~N~-l~~l~~-l~--------~l~~L~~L~L~~ 382 (384)
T d2omza2 325 VSSLTKLQRLFFANN-KVSDVS---SLANLTNINWLSAGHNQ-ISDLTP-LA--------NLTRITQLGLND 382 (384)
T ss_dssp GGGCTTCCEEECCSS-CCCCCG---GGGGCTTCCEEECCSSC-CCBCGG-GT--------TCTTCSEEECCC
T ss_pred cccCCCCCEEECCCC-CCCCCh---hHcCCCCCCEEECCCCc-CCCChh-hc--------cCCCCCEeeCCC
Confidence 455778888888885 666652 35678888888888775 666643 22 378888888876
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1.6e-16 Score=161.06 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=60.3
Q ss_pred cccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccCCCCccEEEecCCCCcccccch
Q 036689 45 EGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFLL 124 (595)
Q Consensus 45 ~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~ 124 (595)
..+.+|++|.++++ +++.+. ....+++|++|+++++ +++.+. +++.+++|++|++++| .+.+++
T Consensus 41 ~~l~~l~~L~l~~~-~I~~l~-------gl~~L~nL~~L~Ls~N-~l~~l~----~l~~L~~L~~L~L~~n-~i~~i~-- 104 (384)
T d2omza2 41 TDLDQVTTLQADRL-GIKSID-------GVEYLNNLTQINFSNN-QLTDIT----PLKNLTKLVDILMNNN-QIADIT-- 104 (384)
T ss_dssp HHHTTCCEEECCSS-CCCCCT-------TGGGCTTCCEEECCSS-CCCCCG----GGTTCTTCCEEECCSS-CCCCCG--
T ss_pred HHhCCCCEEECCCC-CCCCcc-------ccccCCCCCEEeCcCC-cCCCCc----cccCCccccccccccc-cccccc--
Confidence 56788899999887 676541 3457888999999986 677652 2678889999999886 566553
Q ss_pred hhhhcCCCCcEEEEcccC
Q 036689 125 SAAKCLPRLERIAVINCR 142 (595)
Q Consensus 125 ~~~~~l~~L~~L~l~~c~ 142 (595)
.++++++|+.|++.++.
T Consensus 105 -~l~~l~~L~~L~~~~~~ 121 (384)
T d2omza2 105 -PLANLTNLTGLTLFNNQ 121 (384)
T ss_dssp -GGTTCTTCCEEECCSSC
T ss_pred -ccccccccccccccccc
Confidence 36788889999887643
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.59 E-value=6.3e-14 Score=136.91 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=57.4
Q ss_pred cCCccEEeEeCCCCCcccccchHHhhcccccEEEEcCcccccchhcccCccccccccccccccceeccccccccccccCc
Q 036689 444 FRNLKILEVSGCKKLTNLVASSAAQSLVALVKMQVFGCRAMTQVVKSEGNQLAREEIVFNKLKMLSLLDLDSLTSFCSGN 523 (595)
Q Consensus 444 l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~i~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~ 523 (595)
+++|+.|+++++. .....+ ..+..++.+++|+++++. +++++..... .+++|++|+++++ .++.+|.+.
T Consensus 170 ~~~L~~L~l~~n~-~~~~~~-~~~~~~~~l~~L~~s~n~-l~~~~~~~~~-------~l~~L~~L~L~~N-~L~~lp~~l 238 (305)
T d1xkua_ 170 PPSLTELHLDGNK-ITKVDA-ASLKGLNNLAKLGLSFNS-ISAVDNGSLA-------NTPHLRELHLNNN-KLVKVPGGL 238 (305)
T ss_dssp CTTCSEEECTTSC-CCEECT-GGGTTCTTCCEEECCSSC-CCEECTTTGG-------GSTTCCEEECCSS-CCSSCCTTT
T ss_pred CCccCEEECCCCc-CCCCCh-hHhhcccccccccccccc-cccccccccc-------ccccceeeecccc-ccccccccc
Confidence 3556666666533 232212 334555666666666654 5554333222 3566666666664 566665443
Q ss_pred ccccCCCccEEEEeCCCCccccCCC-------CCCCCCcceEEeccCCC
Q 036689 524 YIFKFPSLEVLFVVGCPKMNIFTTG-------ELSTPPRVDVMYRNRGA 565 (595)
Q Consensus 524 ~~~~~~~L~~L~l~~C~~l~~lp~~-------~~~~~~L~~l~i~~~~~ 565 (595)
..+++|++|+++++ +++.++.. ....++|+.+.+++|..
T Consensus 239 --~~l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 239 --ADHKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp --TTCSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred --ccccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCcC
Confidence 23666666666664 45555432 12356677777765543
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.59 E-value=8.4e-14 Score=136.01 Aligned_cols=58 Identities=26% Similarity=0.275 Sum_probs=25.7
Q ss_pred CCccEEeccCccCccccccccccccCCCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcc
Q 036689 78 PILESLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVIN 140 (595)
Q Consensus 78 ~~L~~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~ 140 (595)
+++++|+++++ +++++... .+..+++|++|++++|. +..+++ ..+.++++|++|++++
T Consensus 31 ~~l~~L~Ls~N-~i~~l~~~--~f~~l~~L~~L~l~~n~-~~~i~~-~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 31 PDTALLDLQNN-KITEIKDG--DFKNLKNLHTLILINNK-ISKISP-GAFAPLVKLERLYLSK 88 (305)
T ss_dssp TTCCEEECCSS-CCCCBCTT--TTTTCTTCCEEECCSSC-CCCBCT-TTTTTCTTCCEEECCS
T ss_pred CCCCEEECcCC-cCCCcChh--Hhhcccccccccccccc-ccccch-hhhhCCCccCEecccC
Confidence 34555555553 44444211 13444555555555532 232322 3344455555555554
No 5
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.53 E-value=1.2e-12 Score=130.14 Aligned_cols=249 Identities=17% Similarity=0.102 Sum_probs=132.2
Q ss_pred CccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCC
Q 036689 223 SNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADD 302 (595)
Q Consensus 223 ~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~ 302 (595)
+.|++|++++|.+..+ |.. ..+++|+.|+++++. +...+ ...+.+..+.+..+. ......
T Consensus 98 ~~L~~L~L~~n~l~~l-----p~~--~~l~~L~~L~l~~~~-~~~~~-----~~~~~l~~l~~~~~~-~~~~~~------ 157 (353)
T d1jl5a_ 98 PLLEYLGVSNNQLEKL-----PEL--QNSSFLKIIDVDNNS-LKKLP-----DLPPSLEFIAAGNNQ-LEELPE------ 157 (353)
T ss_dssp TTCCEEECCSSCCSSC-----CCC--TTCTTCCEEECCSSC-CSCCC-----CCCTTCCEEECCSSC-CSSCCC------
T ss_pred cccccccccccccccc-----cch--hhhccceeecccccc-ccccc-----cccccccchhhcccc-cccccc------
Confidence 3577788887766655 432 357788888887653 33222 223566667666554 222111
Q ss_pred CCCCCcCCCcccEEeecCCCCcccccCCCccccCcccceeeecCCCCccccccccccccCCCCCCCCCCCCCCCCCCcCc
Q 036689 303 QVPPNFVFPQVTILRLVGLPELKCLYPGMHTSEWPALKLLDVSACDQVTVFDSELFSFCESSEEDKPDIPAQQPLFLPEK 382 (595)
Q Consensus 303 ~~~~~~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 382 (595)
...++.++.+.+.++.. ..++.. ....+.+... +..+..++. ..
T Consensus 158 ----l~~l~~l~~L~l~~n~~-~~~~~~-----~~~~~~l~~~-~~~~~~~~~-------------------------~~ 201 (353)
T d1jl5a_ 158 ----LQNLPFLTAIYADNNSL-KKLPDL-----PLSLESIVAG-NNILEELPE-------------------------LQ 201 (353)
T ss_dssp ----CTTCTTCCEEECCSSCC-SSCCCC-----CTTCCEEECC-SSCCSSCCC-------------------------CT
T ss_pred ----ccccccceecccccccc-cccccc-----cccccccccc-ccccccccc-------------------------cc
Confidence 11266777777776432 222111 1222233222 222333333 35
Q ss_pred cCCCcceEeccCCCCeeccCCCCCcccccCceeEEeeccccccccccCcccccc--CC---CCcccc-CCccEEeEeCCC
Q 036689 383 VFPNLEELGLDGKDIRMIWHGDFPQHLFGGLKVLQLKFDASAAVVSSCDNLLIL--LP---SSSVSF-RNLKILEVSGCK 456 (595)
Q Consensus 383 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~l~~~--~~---~~~~~l-~~L~~L~l~~c~ 456 (595)
.++.|+.++++++....... ...++..+.+......-.......+... .. ..+..+ ......++.. .
T Consensus 202 ~l~~L~~l~l~~n~~~~~~~------~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~-~ 274 (353)
T d1jl5a_ 202 NLPFLTTIYADNNLLKTLPD------LPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASS-N 274 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCS------CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSEESCCCTTCCEEECCS-S
T ss_pred cccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccchhccccccc-C
Confidence 67888888888876543221 2233444444321100000000000000 00 000001 1223334433 2
Q ss_pred CCcccccchHHhhcccccEEEEcCcccccchhcccCccccccccccccccceeccccccccccccCcccccCCCccEEEE
Q 036689 457 KLTNLVASSAAQSLVALVKMQVFGCRAMTQVVKSEGNQLAREEIVFNKLKMLSLLDLDSLTSFCSGNYIFKFPSLEVLFV 536 (595)
Q Consensus 457 ~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~i~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~L~~L~l 536 (595)
.+..+ ...+++|++|++++|. +++++. .+++|+.|+++++ .+++++. .+++|++|++
T Consensus 275 ~~~~~-----~~~~~~L~~L~Ls~N~-l~~lp~-----------~~~~L~~L~L~~N-~L~~l~~-----~~~~L~~L~L 331 (353)
T d1jl5a_ 275 EIRSL-----CDLPPSLEELNVSNNK-LIELPA-----------LPPRLERLIASFN-HLAEVPE-----LPQNLKQLHV 331 (353)
T ss_dssp CCSEE-----CCCCTTCCEEECCSSC-CSCCCC-----------CCTTCCEEECCSS-CCSCCCC-----CCTTCCEEEC
T ss_pred ccccc-----cccCCCCCEEECCCCc-cCcccc-----------ccCCCCEEECCCC-cCCcccc-----ccCCCCEEEC
Confidence 33333 1346789999999986 777753 2789999999886 6888873 2678999999
Q ss_pred eCCCCccccCCCCCCCCCcceEEec
Q 036689 537 VGCPKMNIFTTGELSTPPRVDVMYR 561 (595)
Q Consensus 537 ~~C~~l~~lp~~~~~~~~L~~l~i~ 561 (595)
++|+ ++.+|.. +.+|+.|+++
T Consensus 332 ~~N~-L~~lp~~---~~~L~~L~~~ 352 (353)
T d1jl5a_ 332 EYNP-LREFPDI---PESVEDLRMN 352 (353)
T ss_dssp CSSC-CSSCCCC---CTTCCEEECC
T ss_pred cCCc-CCCCCcc---ccccCeeECc
Confidence 9986 8999863 4578888875
No 6
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.7e-15 Score=144.95 Aligned_cols=64 Identities=23% Similarity=0.230 Sum_probs=43.6
Q ss_pred ccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCCCCCCCcCCCcccEEeecCC
Q 036689 249 LCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADDQVPPNFVFPQVTILRLVGL 321 (595)
Q Consensus 249 ~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~ 321 (595)
..+++|++|++++|..+++.. ...+.++++|++|++++|..+++....... .+|+|+.|++.+|
T Consensus 172 ~~~~~L~~L~L~~~~~itd~~-~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~--------~~~~L~~L~l~~~ 235 (284)
T d2astb2 172 RRCPNLVHLDLSDSVMLKNDC-FQEFFQLNYLQHLSLSRCYDIIPETLLELG--------EIPTLKTLQVFGI 235 (284)
T ss_dssp HHCTTCSEEECTTCTTCCGGG-GGGGGGCTTCCEEECTTCTTCCGGGGGGGG--------GCTTCCEEECTTS
T ss_pred cccccccccccccccCCCchh-hhhhcccCcCCEEECCCCCCCChHHHHHHh--------cCCCCCEEeeeCC
Confidence 356788888888887776542 334577888888888888766544332221 2788888888886
No 7
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.52 E-value=8e-14 Score=136.72 Aligned_cols=129 Identities=13% Similarity=0.073 Sum_probs=67.9
Q ss_pred ceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCCCCC
Q 036689 226 EVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADDQVP 305 (595)
Q Consensus 226 ~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~ 305 (595)
+.+++++++++... |..+ ..+ ....+++..+.. ....+. ..+.+++++.+++.++. +...++ ...
T Consensus 177 ~~l~~~~n~l~~~~----~~~~-~~l-~~~~l~l~~~~~-~~~~~~-~~~~~~~l~~l~~~~~~-l~~~~~-~~~----- 241 (313)
T d1ogqa_ 177 TSMTISRNRLTGKI----PPTF-ANL-NLAFVDLSRNML-EGDASV-LFGSDKNTQKIHLAKNS-LAFDLG-KVG----- 241 (313)
T ss_dssp CEEECCSSEEEEEC----CGGG-GGC-CCSEEECCSSEE-EECCGG-GCCTTSCCSEEECCSSE-ECCBGG-GCC-----
T ss_pred cccccccccccccc----cccc-ccc-cccccccccccc-cccccc-ccccccccccccccccc-cccccc-ccc-----
Confidence 55666666555431 2221 122 333455554432 222222 34566777777777665 443322 111
Q ss_pred CCcCCCcccEEeecCCCCcccccCCCccccCcccceeeecCCCCccccccccccccCCCCCCCCCCCCCCCCCCcCccCC
Q 036689 306 PNFVFPQVTILRLVGLPELKCLYPGMHTSEWPALKLLDVSACDQVTVFDSELFSFCESSEEDKPDIPAQQPLFLPEKVFP 385 (595)
Q Consensus 306 ~~~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 385 (595)
.+++|+.|+++++.-...+|.... .+++|++|+++++..-..+|. .+.++
T Consensus 242 ---~~~~L~~L~Ls~N~l~g~iP~~l~--~L~~L~~L~Ls~N~l~g~iP~-------------------------~~~L~ 291 (313)
T d1ogqa_ 242 ---LSKNLNGLDLRNNRIYGTLPQGLT--QLKFLHSLNVSFNNLCGEIPQ-------------------------GGNLQ 291 (313)
T ss_dssp ---CCTTCCEEECCSSCCEECCCGGGG--GCTTCCEEECCSSEEEEECCC-------------------------STTGG
T ss_pred ---cccccccccCccCeecccCChHHh--CCCCCCEEECcCCcccccCCC-------------------------cccCC
Confidence 156777777777543334444322 267777777777643335555 35667
Q ss_pred CcceEeccCCCCee
Q 036689 386 NLEELGLDGKDIRM 399 (595)
Q Consensus 386 ~L~~L~l~~~~~~~ 399 (595)
+|+.+++.+|+.+.
T Consensus 292 ~L~~l~l~~N~~l~ 305 (313)
T d1ogqa_ 292 RFDVSAYANNKCLC 305 (313)
T ss_dssp GSCGGGTCSSSEEE
T ss_pred CCCHHHhCCCcccc
Confidence 77777777776543
No 8
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.52 E-value=9.6e-14 Score=136.13 Aligned_cols=261 Identities=15% Similarity=0.105 Sum_probs=147.4
Q ss_pred ccccc-----ccccccEEEeccCCCCcc--ccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccC
Q 036689 15 SKKLQ-----GIKDVEYLCLDKSQDVKN--VLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYN 87 (595)
Q Consensus 15 ~~~~~-----~l~~L~~L~L~~~~~~~~--~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~ 87 (595)
++||. ...++.+|+|.++...+. ++..+ +.+++|++|+|+++..+....|. .+..+++|++|++++
T Consensus 38 w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l--~~L~~L~~L~Ls~~N~l~g~iP~-----~i~~L~~L~~L~Ls~ 110 (313)
T d1ogqa_ 38 WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL--ANLPYLNFLYIGGINNLVGPIPP-----AIAKLTQLHYLYITH 110 (313)
T ss_dssp STTEEECCSSSCCCEEEEEEECCCCSSCEECCGGG--GGCTTCSEEEEEEETTEESCCCG-----GGGGCTTCSEEEEEE
T ss_pred CCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHH--hcCcccccccccccccccccccc-----ccccccccchhhhcc
Confidence 56666 223689999998877543 44444 89999999999875456522132 467889999999999
Q ss_pred ccCccccccccccccCCCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcccCCcceeecccCccccccccccccccc
Q 036689 88 LIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVINCRNIQEIFVVDGEYDAIDHQKIEFGQL 167 (595)
Q Consensus 88 ~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~~L 167 (595)
+ ++..+... .+..+.+|++++++++.....+| ..+.+++.|++++++++.....+|.. ...+..+
T Consensus 111 N-~l~~~~~~--~~~~~~~L~~l~l~~N~~~~~~p--~~l~~l~~L~~l~l~~n~l~~~ip~~----------~~~l~~l 175 (313)
T d1ogqa_ 111 T-NVSGAIPD--FLSQIKTLVTLDFSYNALSGTLP--PSISSLPNLVGITFDGNRISGAIPDS----------YGSFSKL 175 (313)
T ss_dssp E-CCEEECCG--GGGGCTTCCEEECCSSEEESCCC--GGGGGCTTCCEEECCSSCCEEECCGG----------GGCCCTT
T ss_pred c-cccccccc--cccchhhhcccccccccccccCc--hhhccCcccceeeccccccccccccc----------ccccccc
Confidence 6 66655322 36778899999999865444333 67888999999999986655555432 2233343
Q ss_pred -ceEecCCCCCccccccccccccccccccccccCccccccccccCCCccccccccCCccceeecccccceeecccCCCcc
Q 036689 168 -STLCLGSLPELTSFCCEVKKNRQAQGMHETCSNKISSLEDKLDISSPLFNEKVALSNLEVLEMNKVNIEKIWHNQLPVA 246 (595)
Q Consensus 168 -~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~ 246 (595)
+.+.+++. .+....... + ..+ ....+++.++..... .|..
T Consensus 176 ~~~l~~~~n-~l~~~~~~~------------------------------~---~~l-~~~~l~l~~~~~~~~----~~~~ 216 (313)
T d1ogqa_ 176 FTSMTISRN-RLTGKIPPT------------------------------F---ANL-NLAFVDLSRNMLEGD----ASVL 216 (313)
T ss_dssp CCEEECCSS-EEEEECCGG------------------------------G---GGC-CCSEEECCSSEEEEC----CGGG
T ss_pred ccccccccc-ccccccccc------------------------------c---ccc-ccccccccccccccc----cccc
Confidence 44444432 222111100 0 011 223455555433221 1332
Q ss_pred ccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCCCCCCCcCCCcccEEeecCCCCccc
Q 036689 247 MFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADDQVPPNFVFPQVTILRLVGLPELKC 326 (595)
Q Consensus 247 ~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~ 326 (595)
+ ..+++++.+++.++. +...++ .++.+++|++|++++|+ +++..+..... +++|++|+|+++.--..
T Consensus 217 ~-~~~~~l~~l~~~~~~-l~~~~~--~~~~~~~L~~L~Ls~N~-l~g~iP~~l~~--------L~~L~~L~Ls~N~l~g~ 283 (313)
T d1ogqa_ 217 F-GSDKNTQKIHLAKNS-LAFDLG--KVGLSKNLNGLDLRNNR-IYGTLPQGLTQ--------LKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp C-CTTSCCSEEECCSSE-ECCBGG--GCCCCTTCCEEECCSSC-CEECCCGGGGG--------CTTCCEEECCSSEEEEE
T ss_pred c-ccccccccccccccc-cccccc--ccccccccccccCccCe-ecccCChHHhC--------CCCCCEEECcCCccccc
Confidence 2 345666666666543 332222 23556667777777666 55322212222 66677777766432223
Q ss_pred ccCCCccccCcccceeeecCCCCccc
Q 036689 327 LYPGMHTSEWPALKLLDVSACDQVTV 352 (595)
Q Consensus 327 ~~~~~~~~~~~~L~~L~l~~c~~l~~ 352 (595)
+|.. ..+++|+.+++.+++.+..
T Consensus 284 iP~~---~~L~~L~~l~l~~N~~l~g 306 (313)
T d1ogqa_ 284 IPQG---GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCCS---TTGGGSCGGGTCSSSEEES
T ss_pred CCCc---ccCCCCCHHHhCCCccccC
Confidence 4322 1256666666666665544
No 9
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.47 E-value=7.9e-12 Score=124.01 Aligned_cols=95 Identities=19% Similarity=0.056 Sum_probs=66.7
Q ss_pred ccccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccc
Q 036689 22 KDVEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSV 101 (595)
Q Consensus 22 ~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~ 101 (595)
.+++.|+|++++. +.++ + -.++|++|+++++ .++.++ ..+.+|++|++.++ .++.+..
T Consensus 38 ~~l~~LdLs~~~L-~~lp-~----~~~~L~~L~Ls~N-~l~~lp---------~~~~~L~~L~l~~n-~l~~l~~----- 95 (353)
T d1jl5a_ 38 RQAHELELNNLGL-SSLP-E----LPPHLESLVASCN-SLTELP---------ELPQSLKSLLVDNN-NLKALSD----- 95 (353)
T ss_dssp HTCSEEECTTSCC-SCCC-S----CCTTCSEEECCSS-CCSSCC---------CCCTTCCEEECCSS-CCSCCCS-----
T ss_pred cCCCEEEeCCCCC-CCCC-C----CCCCCCEEECCCC-CCcccc---------cchhhhhhhhhhhc-ccchhhh-----
Confidence 4688999988865 4443 2 3578999999887 677552 23578999999985 5655421
Q ss_pred cCCCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcccCC
Q 036689 102 QSFNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVINCRN 143 (595)
Q Consensus 102 ~~l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~ 143 (595)
-.+.|++|+++++ .++.++. .+.+++|++|+++++..
T Consensus 96 -lp~~L~~L~L~~n-~l~~lp~---~~~l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 96 -LPPLLEYLGVSNN-QLEKLPE---LQNSSFLKIIDVDNNSL 132 (353)
T ss_dssp -CCTTCCEEECCSS-CCSSCCC---CTTCTTCCEEECCSSCC
T ss_pred -hcccccccccccc-ccccccc---hhhhccceeeccccccc
Confidence 1246999999985 6776652 46788999999887543
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.2e-12 Score=124.99 Aligned_cols=176 Identities=19% Similarity=0.182 Sum_probs=118.1
Q ss_pred CCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccCCCCccEEEecCCCCcccccchhhh
Q 036689 48 LQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFLLSAA 127 (595)
Q Consensus 48 ~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~~~~ 127 (595)
+++++|+|++| .++.+++. .+..+++|++|+++++ +++.+. .++.+++|++|+++++ .++..+ ..+
T Consensus 31 ~~l~~L~Ls~N-~i~~l~~~-----~f~~l~~L~~L~L~~N-~l~~l~----~~~~l~~L~~L~Ls~N-~l~~~~--~~~ 96 (266)
T d1p9ag_ 31 KDTTILHLSEN-LLYTFSLA-----TLMPYTRLTQLNLDRA-ELTKLQ----VDGTLPVLGTLDLSHN-QLQSLP--LLG 96 (266)
T ss_dssp TTCCEEECTTS-CCSEEEGG-----GGTTCTTCCEEECTTS-CCCEEE----CCSCCTTCCEEECCSS-CCSSCC--CCT
T ss_pred cCCCEEECcCC-cCCCcCHH-----Hhhccccccccccccc-cccccc----cccccccccccccccc-cccccc--ccc
Confidence 57888888887 67777543 4566778888888875 666652 1356778888888874 566554 456
Q ss_pred hcCCCCcEEEEcccCCcceeecccCcccccccccccccccceEecCCCCCccccccccccccccccccccccCccccccc
Q 036689 128 KCLPRLERIAVINCRNIQEIFVVDGEYDAIDHQKIEFGQLSTLCLGSLPELTSFCCEVKKNRQAQGMHETCSNKISSLED 207 (595)
Q Consensus 128 ~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (595)
.++++|++|+++++.. ..++..
T Consensus 97 ~~l~~L~~L~l~~~~~-~~~~~~--------------------------------------------------------- 118 (266)
T d1p9ag_ 97 QTLPALTVLDVSFNRL-TSLPLG--------------------------------------------------------- 118 (266)
T ss_dssp TTCTTCCEEECCSSCC-CCCCSS---------------------------------------------------------
T ss_pred cccccccccccccccc-ceeecc---------------------------------------------------------
Confidence 6777788887776432 211100
Q ss_pred cccCCCccccccccCCccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeec
Q 036689 208 KLDISSPLFNEKVALSNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRY 287 (595)
Q Consensus 208 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~ 287 (595)
.+ ..+.+++.|++++|.++.+ |...+..+++|+.++++++ .++.+++ ..++.+++|++|++++
T Consensus 119 -------~~---~~l~~l~~L~l~~n~l~~l-----~~~~~~~l~~l~~l~l~~N-~l~~~~~-~~~~~l~~L~~L~Ls~ 181 (266)
T d1p9ag_ 119 -------AL---RGLGELQELYLKGNELKTL-----PPGLLTPTPKLEKLSLANN-NLTELPA-GLLNGLENLDTLLLQE 181 (266)
T ss_dssp -------TT---TTCTTCCEEECTTSCCCCC-----CTTTTTTCTTCCEEECTTS-CCSCCCT-TTTTTCTTCCEEECCS
T ss_pred -------cc---cccccccccccccccccee-----ccccccccccchhcccccc-cccccCc-cccccccccceeeccc
Confidence 01 1366788888888877666 4433356788899998865 6766544 3567888899999998
Q ss_pred ccccceecccccCCCCCCCCcCCCcccEEeecCCC
Q 036689 288 CKGLQEIISKEGADDQVPPNFVFPQVTILRLVGLP 322 (595)
Q Consensus 288 c~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~ 322 (595)
+. ++.++.. .. .+++|+.|+|++++
T Consensus 182 N~-L~~lp~~-~~--------~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 182 NS-LYTIPKG-FF--------GSHLLPFAFLHGNP 206 (266)
T ss_dssp SC-CCCCCTT-TT--------TTCCCSEEECCSCC
T ss_pred CC-CcccChh-HC--------CCCCCCEEEecCCC
Confidence 87 8877652 22 27788888888865
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.8e-12 Score=124.97 Aligned_cols=85 Identities=18% Similarity=0.147 Sum_probs=59.1
Q ss_pred CCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccCCCCccEEEecCCCCcccccchhhh
Q 036689 48 LQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFLLSAA 127 (595)
Q Consensus 48 ~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~~~~ 127 (595)
+++++|+|++| .++.+++. .+..+++|++|+++++ ++..+... ....+..++.+.....+.++.+++ ..+
T Consensus 32 ~~~~~L~Ls~N-~i~~i~~~-----~f~~l~~L~~L~ls~n-~l~~i~~~--~~~~~~~~~~l~~~~~~~~~~l~~-~~~ 101 (284)
T d1ozna_ 32 AASQRIFLHGN-RISHVPAA-----SFRACRNLTILWLHSN-VLARIDAA--AFTGLALLEQLDLSDNAQLRSVDP-ATF 101 (284)
T ss_dssp TTCSEEECTTS-CCCEECTT-----TTTTCTTCCEEECCSS-CCCEECTT--TTTTCTTCCEEECCSCTTCCCCCT-TTT
T ss_pred CCCCEEECcCC-cCCCCCHH-----Hhhccccccccccccc-cccccccc--cccccccccccccccccccccccc-hhh
Confidence 56788888887 67777544 4667778888888874 56655322 245667788887777677776654 567
Q ss_pred hcCCCCcEEEEcccC
Q 036689 128 KCLPRLERIAVINCR 142 (595)
Q Consensus 128 ~~l~~L~~L~l~~c~ 142 (595)
+++++|++|++++|.
T Consensus 102 ~~l~~L~~L~l~~n~ 116 (284)
T d1ozna_ 102 HGLGRLHTLHLDRCG 116 (284)
T ss_dssp TTCTTCCEEECTTSC
T ss_pred cccccCCEEecCCcc
Confidence 778888888887754
No 12
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.8e-12 Score=123.66 Aligned_cols=197 Identities=21% Similarity=0.187 Sum_probs=114.8
Q ss_pred CCccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCC
Q 036689 222 LSNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGAD 301 (595)
Q Consensus 222 l~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~ 301 (595)
...+.+.+.++++++.+ |..+ .+++++|+|+++ .++.+++ ..+.++++|++|+++++. ++.++...
T Consensus 9 ~~~~~~v~C~~~~L~~i-----P~~l---p~~l~~L~Ls~N-~i~~l~~-~~f~~l~~L~~L~L~~N~-l~~l~~~~--- 74 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLTAL-----PPDL---PKDTTILHLSEN-LLYTFSL-ATLMPYTRLTQLNLDRAE-LTKLQVDG--- 74 (266)
T ss_dssp STTCCEEECTTSCCSSC-----CSCC---CTTCCEEECTTS-CCSEEEG-GGGTTCTTCCEEECTTSC-CCEEECCS---
T ss_pred cCCCeEEEccCCCCCee-----CcCc---CcCCCEEECcCC-cCCCcCH-HHhhcccccccccccccc-cccccccc---
Confidence 34445556666667666 7654 367899999874 6777644 356788999999999886 88775421
Q ss_pred CCCCCCcCCCcccEEeecCCCCcccccCCCccccCcccceeeecCCCCccccccccccccCCCCCCCCCCCCCCCCCCcC
Q 036689 302 DQVPPNFVFPQVTILRLVGLPELKCLYPGMHTSEWPALKLLDVSACDQVTVFDSELFSFCESSEEDKPDIPAQQPLFLPE 381 (595)
Q Consensus 302 ~~~~~~~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 381 (595)
.+++|++|+++++. +...+.. ...+++|+.|+++++... .++. ...
T Consensus 75 -------~l~~L~~L~Ls~N~-l~~~~~~--~~~l~~L~~L~l~~~~~~-~~~~-----------------------~~~ 120 (266)
T d1p9ag_ 75 -------TLPVLGTLDLSHNQ-LQSLPLL--GQTLPALTVLDVSFNRLT-SLPL-----------------------GAL 120 (266)
T ss_dssp -------CCTTCCEEECCSSC-CSSCCCC--TTTCTTCCEEECCSSCCC-CCCS-----------------------STT
T ss_pred -------cccccccccccccc-ccccccc--cccccccccccccccccc-eeec-----------------------ccc
Confidence 27889999998854 4443332 223678888888776432 2332 223
Q ss_pred ccCCCcceEeccCCCCeeccCCCCCcccccCceeEEeeccccccccccCccccccCCCCccccCCccEEeEeCCCCCccc
Q 036689 382 KVFPNLEELGLDGKDIRMIWHGDFPQHLFGGLKVLQLKFDASAAVVSSCDNLLILLPSSSVSFRNLKILEVSGCKKLTNL 461 (595)
Q Consensus 382 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~l~~~~~~~~~~l~~L~~L~l~~c~~l~~~ 461 (595)
..+.++++|++++|....+.+. ....+++|+.+++ ..++++.+++..+..+++|+.|++++ ++++.+
T Consensus 121 ~~l~~l~~L~l~~n~l~~l~~~--~~~~l~~l~~l~l----------~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~L~~l 187 (266)
T d1p9ag_ 121 RGLGELQELYLKGNELKTLPPG--LLTPTPKLEKLSL----------ANNNLTELPAGLLNGLENLDTLLLQE-NSLYTI 187 (266)
T ss_dssp TTCTTCCEEECTTSCCCCCCTT--TTTTCTTCCEEEC----------TTSCCSCCCTTTTTTCTTCCEEECCS-SCCCCC
T ss_pred ccccccccccccccccceeccc--cccccccchhccc----------ccccccccCccccccccccceeeccc-CCCccc
Confidence 5667778888877754433221 1123444555555 33444444444445555555555555 345544
Q ss_pred ccchHHhhcccccEEEEcCc
Q 036689 462 VASSAAQSLVALVKMQVFGC 481 (595)
Q Consensus 462 ~~~~~~~~l~~L~~L~l~~c 481 (595)
+. . +..+++|+.|+++++
T Consensus 188 p~-~-~~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 188 PK-G-FFGSHLLPFAFLHGN 205 (266)
T ss_dssp CT-T-TTTTCCCSEEECCSC
T ss_pred Ch-h-HCCCCCCCEEEecCC
Confidence 21 2 223455555555543
No 13
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.8e-14 Score=139.07 Aligned_cols=189 Identities=19% Similarity=0.130 Sum_probs=104.9
Q ss_pred cCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCCCCCCCcCCCcccEEeecCCCCcccccC
Q 036689 250 CFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADDQVPPNFVFPQVTILRLVGLPELKCLYP 329 (595)
Q Consensus 250 ~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~ 329 (595)
...+|++|++++|. ++......++..+++|++|++++|. +++....... .+++|++|++++|..+++...
T Consensus 44 ~~~~L~~LdLs~~~-i~~~~l~~l~~~c~~L~~L~L~~~~-l~~~~~~~l~--------~~~~L~~L~Ls~c~~itd~~l 113 (284)
T d2astb2 44 SPFRVQHMDLSNSV-IEVSTLHGILSQCSKLQNLSLEGLR-LSDPIVNTLA--------KNSNLVRLNLSGCSGFSEFAL 113 (284)
T ss_dssp CCBCCCEEECTTCE-ECHHHHHHHHTTBCCCSEEECTTCB-CCHHHHHHHT--------TCTTCSEEECTTCBSCCHHHH
T ss_pred cCCCCCEEECCCCc-cCHHHHHHHHHhCCCcccccccccC-CCcHHHHHHh--------cCCCCcCcccccccccccccc
Confidence 34578888887763 3322223356777888888888875 5433221221 167788888888776654322
Q ss_pred CCccccCcccceeeecCCCCcccc--ccccccccCCCCCCCCCCCCCCCCCCcCccCCCcceEeccCCCC-eeccCCCCC
Q 036689 330 GMHTSEWPALKLLDVSACDQVTVF--DSELFSFCESSEEDKPDIPAQQPLFLPEKVFPNLEELGLDGKDI-RMIWHGDFP 406 (595)
Q Consensus 330 ~~~~~~~~~L~~L~l~~c~~l~~l--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~-~~~~~~~~~ 406 (595)
......+++|++|++++|..++.- .. .+...+++|+.|++++|.. ++.
T Consensus 114 ~~l~~~~~~L~~L~ls~c~~~~~~~~~~-----------------------~~~~~~~~L~~L~l~~~~~~i~~------ 164 (284)
T d2astb2 114 QTLLSSCSRLDELNLSWCFDFTEKHVQV-----------------------AVAHVSETITQLNLSGYRKNLQK------ 164 (284)
T ss_dssp HHHHHHCTTCCEEECCCCTTCCHHHHHH-----------------------HHHHSCTTCCEEECCSCGGGSCH------
T ss_pred chhhHHHHhccccccccccccccccchh-----------------------hhcccccccchhhhccccccccc------
Confidence 112223677888888877665431 11 0112356777777776532 110
Q ss_pred cccccCceeEEeeccccccccccCccccccCCCCccccCCccEEeEeCCCCCcccccchHHhhcccccEEEEcCcccccc
Q 036689 407 QHLFGGLKVLQLKFDASAAVVSSCDNLLILLPSSSVSFRNLKILEVSGCKKLTNLVASSAAQSLVALVKMQVFGCRAMTQ 486 (595)
Q Consensus 407 ~~~~~~L~~L~L~~~~~~l~~~~~~~l~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~ 486 (595)
..+.. ....+++|++|++++|..+++... ..+..+++|++|++++|..+++
T Consensus 165 ------------------------~~l~~----l~~~~~~L~~L~L~~~~~itd~~~-~~l~~~~~L~~L~L~~C~~i~~ 215 (284)
T d2astb2 165 ------------------------SDLST----LVRRCPNLVHLDLSDSVMLKNDCF-QEFFQLNYLQHLSLSRCYDIIP 215 (284)
T ss_dssp ------------------------HHHHH----HHHHCTTCSEEECTTCTTCCGGGG-GGGGGCTTCCEEECTTCTTCCG
T ss_pred ------------------------ccccc----cccccccccccccccccCCCchhh-hhhcccCcCCEEECCCCCCCCh
Confidence 00000 112356777777777776665422 2335567777777777765544
Q ss_pred hhcccCccccccccccccccceecccc
Q 036689 487 VVKSEGNQLAREEIVFNKLKMLSLLDL 513 (595)
Q Consensus 487 i~~~~~~~~~~~~~~l~~L~~L~l~~~ 513 (595)
....... .+|+|+.|++++|
T Consensus 216 ~~l~~L~-------~~~~L~~L~l~~~ 235 (284)
T d2astb2 216 ETLLELG-------EIPTLKTLQVFGI 235 (284)
T ss_dssp GGGGGGG-------GCTTCCEEECTTS
T ss_pred HHHHHHh-------cCCCCCEEeeeCC
Confidence 3222111 3677777777776
No 14
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=5.2e-12 Score=121.61 Aligned_cols=205 Identities=20% Similarity=0.182 Sum_probs=137.2
Q ss_pred CccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCC
Q 036689 223 SNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADD 302 (595)
Q Consensus 223 ~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~ 302 (595)
+++++|++++|+++.+ |...+..+++|++|++++. .++.+... ....++.++++.+.....++.++...+.+
T Consensus 32 ~~~~~L~Ls~N~i~~i-----~~~~f~~l~~L~~L~ls~n-~l~~i~~~-~~~~~~~~~~l~~~~~~~~~~l~~~~~~~- 103 (284)
T d1ozna_ 32 AASQRIFLHGNRISHV-----PAASFRACRNLTILWLHSN-VLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHG- 103 (284)
T ss_dssp TTCSEEECTTSCCCEE-----CTTTTTTCTTCCEEECCSS-CCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTT-
T ss_pred CCCCEEECcCCcCCCC-----CHHHhhccccccccccccc-cccccccc-cccccccccccccccccccccccchhhcc-
Confidence 5688999999988887 4433357888999999864 56665443 45777888888887777677776544433
Q ss_pred CCCCCcCCCcccEEeecCCCCcccccCCCccccCcccceeeecCCCCccccccccccccCCCCCCCCCCCCCCCCCCcCc
Q 036689 303 QVPPNFVFPQVTILRLVGLPELKCLYPGMHTSEWPALKLLDVSACDQVTVFDSELFSFCESSEEDKPDIPAQQPLFLPEK 382 (595)
Q Consensus 303 ~~~~~~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 382 (595)
+++|++|++.++.. ..++... ....++|+.+.+.++ .++.++. ..++
T Consensus 104 -------l~~L~~L~l~~n~~-~~~~~~~-~~~~~~L~~l~l~~N-~l~~i~~-----------------------~~f~ 150 (284)
T d1ozna_ 104 -------LGRLHTLHLDRCGL-QELGPGL-FRGLAALQYLYLQDN-ALQALPD-----------------------DTFR 150 (284)
T ss_dssp -------CTTCCEEECTTSCC-CCCCTTT-TTTCTTCCEEECCSS-CCCCCCT-----------------------TTTT
T ss_pred -------cccCCEEecCCccc-ccccccc-cchhcccchhhhccc-cccccCh-----------------------hHhc
Confidence 78899999988653 3332221 222677888888765 3555655 2345
Q ss_pred cCCCcceEeccCCCCeeccCCCCCcccccCceeEEeeccccccccccCccccccCCCCccccCCccEEeEeCCCCCcccc
Q 036689 383 VFPNLEELGLDGKDIRMIWHGDFPQHLFGGLKVLQLKFDASAAVVSSCDNLLILLPSSSVSFRNLKILEVSGCKKLTNLV 462 (595)
Q Consensus 383 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~l~~~~~~~~~~l~~L~~L~l~~c~~l~~~~ 462 (595)
.+++|++|++++|....+.+.. ...+++|+.+.+ ..+++..+.+..+..+++|+.|++++ +.+..++
T Consensus 151 ~~~~L~~L~l~~N~l~~l~~~~--f~~l~~L~~l~l----------~~N~l~~i~~~~f~~l~~L~~L~l~~-N~i~~~~ 217 (284)
T d1ozna_ 151 DLGNLTHLFLHGNRISSVPERA--FRGLHSLDRLLL----------HQNRVAHVHPHAFRDLGRLMTLYLFA-NNLSALP 217 (284)
T ss_dssp TCTTCCEEECCSSCCCEECTTT--TTTCTTCCEEEC----------CSSCCCEECTTTTTTCTTCCEEECCS-SCCSCCC
T ss_pred cccchhhcccccCcccccchhh--hccccccchhhh----------hhccccccChhHhhhhhhcccccccc-ccccccc
Confidence 6788888988888755443322 235667777777 34556666666777777788888877 4566653
Q ss_pred cchHHhhcccccEEEEcCcc
Q 036689 463 ASSAAQSLVALVKMQVFGCR 482 (595)
Q Consensus 463 ~~~~~~~l~~L~~L~l~~c~ 482 (595)
..+++.+++|++|++++++
T Consensus 218 -~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 218 -TEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp -HHHHTTCTTCCEEECCSSC
T ss_pred -ccccccccccCEEEecCCC
Confidence 3455677778888777644
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.37 E-value=4.3e-12 Score=117.88 Aligned_cols=188 Identities=14% Similarity=0.186 Sum_probs=108.0
Q ss_pred cccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccCCCCccEEEecCCCCcccccch
Q 036689 45 EGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFLL 124 (595)
Q Consensus 45 ~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~ 124 (595)
..+.+|++|.+.+| +++.+. ....+++|++|+++++ .+..+ .++..+++|+++++++| .++++
T Consensus 38 ~~l~~L~~L~l~~~-~i~~l~-------~l~~l~~L~~L~ls~n-~i~~~----~~l~~l~~l~~l~~~~n-~~~~i--- 100 (227)
T d1h6ua2 38 ADLDGITTLSAFGT-GVTTIE-------GVQYLNNLIGLELKDN-QITDL----APLKNLTKITELELSGN-PLKNV--- 100 (227)
T ss_dssp HHHHTCCEEECTTS-CCCCCT-------TGGGCTTCCEEECCSS-CCCCC----GGGTTCCSCCEEECCSC-CCSCC---
T ss_pred HHcCCcCEEECCCC-CCCcch-------hHhcCCCCcEeecCCc-eeecc----ccccccccccccccccc-ccccc---
Confidence 56778888888877 565441 3456788888888875 55543 12677788888888875 45554
Q ss_pred hhhhcCCCCcEEEEcccCCcceeecccCcccccccccccccccceEecCCCCCccccccccccccccccccccccCcccc
Q 036689 125 SAAKCLPRLERIAVINCRNIQEIFVVDGEYDAIDHQKIEFGQLSTLCLGSLPELTSFCCEVKKNRQAQGMHETCSNKISS 204 (595)
Q Consensus 125 ~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (595)
+.+.++++|+.+++++|..... . .....+.++.+.++++.-...
T Consensus 101 ~~l~~l~~L~~l~l~~~~~~~~-~-----------~~~~~~~~~~l~~~~~~~~~~------------------------ 144 (227)
T d1h6ua2 101 SAIAGLQSIKTLDLTSTQITDV-T-----------PLAGLSNLQVLYLDLNQITNI------------------------ 144 (227)
T ss_dssp GGGTTCTTCCEEECTTSCCCCC-G-----------GGTTCTTCCEEECCSSCCCCC------------------------
T ss_pred cccccccccccccccccccccc-c-----------hhccccchhhhhchhhhhchh------------------------
Confidence 3456778888888877543211 1 112234444444433221110
Q ss_pred ccccccCCCccccccccCCccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEE
Q 036689 205 LEDKLDISSPLFNEKVALSNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLE 284 (595)
Q Consensus 205 ~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~ 284 (595)
.....+++|+.|.++++.+... +. + ..+++|+.|+++++ .++++++ ++++++|++|+
T Consensus 145 ------------~~~~~~~~L~~L~l~~n~~~~~-----~~-l-~~l~~L~~L~Ls~n-~l~~l~~---l~~l~~L~~L~ 201 (227)
T d1h6ua2 145 ------------SPLAGLTNLQYLSIGNAQVSDL-----TP-L-ANLSKLTTLKADDN-KISDISP---LASLPNLIEVH 201 (227)
T ss_dssp ------------GGGGGCTTCCEEECCSSCCCCC-----GG-G-TTCTTCCEEECCSS-CCCCCGG---GGGCTTCCEEE
T ss_pred ------------hhhccccccccccccccccccc-----hh-h-cccccceecccCCC-ccCCChh---hcCCCCCCEEE
Confidence 0112355667777766655433 11 1 35677777777765 4555432 36667777777
Q ss_pred eecccccceecccccCCCCCCCCcCCCcccEEeec
Q 036689 285 IRYCKGLQEIISKEGADDQVPPNFVFPQVTILRLV 319 (595)
Q Consensus 285 l~~c~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~ 319 (595)
+++|+ ++++++.. .+++|+.|+++
T Consensus 202 Ls~N~-lt~i~~l~----------~l~~L~~L~ls 225 (227)
T d1h6ua2 202 LKNNQ-ISDVSPLA----------NTSNLFIVTLT 225 (227)
T ss_dssp CTTSC-CCBCGGGT----------TCTTCCEEEEE
T ss_pred CcCCc-CCCCcccc----------cCCCCCEEEee
Confidence 77765 66654311 16666666664
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.31 E-value=2.4e-11 Score=112.74 Aligned_cols=188 Identities=13% Similarity=0.191 Sum_probs=140.1
Q ss_pred ccccccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccc
Q 036689 20 GIKDVEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRL 99 (595)
Q Consensus 20 ~l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 99 (595)
.+.+|++|++.+++. +++ ..+ +.+++|++|++++| .++.+. .+..+++|++++++++ .++.+.
T Consensus 39 ~l~~L~~L~l~~~~i-~~l-~~l--~~l~~L~~L~ls~n-~i~~~~-------~l~~l~~l~~l~~~~n-~~~~i~---- 101 (227)
T d1h6ua2 39 DLDGITTLSAFGTGV-TTI-EGV--QYLNNLIGLELKDN-QITDLA-------PLKNLTKITELELSGN-PLKNVS---- 101 (227)
T ss_dssp HHHTCCEEECTTSCC-CCC-TTG--GGCTTCCEEECCSS-CCCCCG-------GGTTCCSCCEEECCSC-CCSCCG----
T ss_pred HcCCcCEEECCCCCC-Ccc-hhH--hcCCCCcEeecCCc-eeeccc-------cccccccccccccccc-cccccc----
Confidence 789999999999976 444 334 89999999999998 566442 4678899999999986 555542
Q ss_pred cccCCCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcccCCcceeecccCcccccccccccccccceEecCCCCCcc
Q 036689 100 SVQSFNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVINCRNIQEIFVVDGEYDAIDHQKIEFGQLSTLCLGSLPELT 179 (595)
Q Consensus 100 ~~~~l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~ 179 (595)
.+..+++|+.+++++|. .... ..+...+.++.+.+++|..... . ....+++|+.|.++++.. .
T Consensus 102 ~l~~l~~L~~l~l~~~~-~~~~---~~~~~~~~~~~l~~~~~~~~~~-~-----------~~~~~~~L~~L~l~~n~~-~ 164 (227)
T d1h6ua2 102 AIAGLQSIKTLDLTSTQ-ITDV---TPLAGLSNLQVLYLDLNQITNI-S-----------PLAGLTNLQYLSIGNAQV-S 164 (227)
T ss_dssp GGTTCTTCCEEECTTSC-CCCC---GGGTTCTTCCEEECCSSCCCCC-G-----------GGGGCTTCCEEECCSSCC-C
T ss_pred ccccccccccccccccc-cccc---chhccccchhhhhchhhhhchh-h-----------hhcccccccccccccccc-c
Confidence 36789999999999974 3434 4456788999999887543221 1 234567899998877542 2
Q ss_pred ccccccccccccccccccccCccccccccccCCCccccccccCCccceeecccccceeecccCCCccccccCCCccEEEE
Q 036689 180 SFCCEVKKNRQAQGMHETCSNKISSLEDKLDISSPLFNEKVALSNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLIL 259 (595)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L 259 (595)
+. .....+++|+.|++++|.++++ +. + ..+++|++|++
T Consensus 165 ~~-----------------------------------~~l~~l~~L~~L~Ls~n~l~~l-----~~-l-~~l~~L~~L~L 202 (227)
T d1h6ua2 165 DL-----------------------------------TPLANLSKLTTLKADDNKISDI-----SP-L-ASLPNLIEVHL 202 (227)
T ss_dssp CC-----------------------------------GGGTTCTTCCEEECCSSCCCCC-----GG-G-GGCTTCCEEEC
T ss_pred cc-----------------------------------hhhcccccceecccCCCccCCC-----hh-h-cCCCCCCEEEC
Confidence 11 1123588999999999988765 32 2 57899999999
Q ss_pred ecCCCCccccchhhhhccCCCcEEEeec
Q 036689 260 RKCPKLKYIFSASMLGSFEHLQHLEIRY 287 (595)
Q Consensus 260 ~~c~~l~~l~~~~~~~~l~~L~~L~l~~ 287 (595)
++| .++++++ ++++++|++|++++
T Consensus 203 s~N-~lt~i~~---l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 203 KNN-QISDVSP---LANTSNLFIVTLTN 226 (227)
T ss_dssp TTS-CCCBCGG---GTTCTTCCEEEEEE
T ss_pred cCC-cCCCCcc---cccCCCCCEEEeeC
Confidence 987 6887654 58999999999974
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=5.9e-11 Score=111.14 Aligned_cols=103 Identities=21% Similarity=0.303 Sum_probs=58.0
Q ss_pred ceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCCCCC
Q 036689 226 EVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADDQVP 305 (595)
Q Consensus 226 ~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~ 305 (595)
+.++.++.+++.+ |..+ .+++++|+++++ .++.++.. .+.++++|++|+++++.....++...+.+
T Consensus 11 ~~i~c~~~~l~~i-----P~~l---~~~l~~L~Ls~n-~i~~l~~~-~f~~l~~L~~L~ls~n~~~~~i~~~~f~~---- 76 (242)
T d1xwdc1 11 RVFLCQESKVTEI-----PSDL---PRNAIELRFVLT-KLRVIQKG-AFSGFGDLEKIEISQNDVLEVIEADVFSN---- 76 (242)
T ss_dssp SEEEEESCSCSSC-----CSCS---CSCCSEEEEESC-CCCEECTT-TTTTCTTCCEEEEESCTTCCEECSSSEES----
T ss_pred CEEEEeCCCCCCc-----CCCC---CCCCCEEECcCC-cCCccChh-Hhhccchhhhhhhccccccceeecccccc----
Confidence 3455554455554 6543 456777777764 56655432 34667777777777776333343322222
Q ss_pred CCcCCCcccEEeecCCCCcccccCCCccccCcccceeeecCC
Q 036689 306 PNFVFPQVTILRLVGLPELKCLYPGMHTSEWPALKLLDVSAC 347 (595)
Q Consensus 306 ~~~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~L~~L~l~~c 347 (595)
+++++++.+..+..+.....+. ...+++|+.+.+.++
T Consensus 77 ----l~~l~~l~~~~~n~l~~~~~~~-~~~l~~L~~l~l~~~ 113 (242)
T d1xwdc1 77 ----LPKLHEIRIEKANNLLYINPEA-FQNLPNLQYLLISNT 113 (242)
T ss_dssp ----CTTCCEEEEECCTTCCEECTTS-EECCTTCCEEEEESC
T ss_pred ----cccccccccccccccccccccc-ccccccccccccchh
Confidence 6667777766665555544432 122566677766665
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=8.8e-11 Score=109.88 Aligned_cols=85 Identities=18% Similarity=0.260 Sum_probs=46.7
Q ss_pred CccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCC
Q 036689 223 SNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADD 302 (595)
Q Consensus 223 ~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~ 302 (595)
+++++|+++++.++.+ |.+.|..+++|++|+++++.....+ +...+..++.++++.+..+.++..++...+.+
T Consensus 29 ~~l~~L~Ls~n~i~~l-----~~~~f~~l~~L~~L~ls~n~~~~~i-~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~- 101 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVI-----QKGAFSGFGDLEKIEISQNDVLEVI-EADVFSNLPKLHEIRIEKANNLLYINPEAFQN- 101 (242)
T ss_dssp SCCSEEEEESCCCCEE-----CTTTTTTCTTCCEEEEESCTTCCEE-CSSSEESCTTCCEEEEECCTTCCEECTTSEEC-
T ss_pred CCCCEEECcCCcCCcc-----ChhHhhccchhhhhhhcccccccee-eccccccccccccccccccccccccccccccc-
Confidence 3566666666666655 3332245666666666665433332 22234556666666666555555554432222
Q ss_pred CCCCCcCCCcccEEeecCC
Q 036689 303 QVPPNFVFPQVTILRLVGL 321 (595)
Q Consensus 303 ~~~~~~~l~~L~~L~L~~~ 321 (595)
+++|+.+++.++
T Consensus 102 -------l~~L~~l~l~~~ 113 (242)
T d1xwdc1 102 -------LPNLQYLLISNT 113 (242)
T ss_dssp -------CTTCCEEEEESC
T ss_pred -------cccccccccchh
Confidence 666666666664
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.26 E-value=2.3e-11 Score=111.26 Aligned_cols=81 Identities=16% Similarity=0.217 Sum_probs=53.4
Q ss_pred cccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccCCCCccEEEecCCCCcccccch
Q 036689 45 EGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFLL 124 (595)
Q Consensus 45 ~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~ 124 (595)
..+.+|++|+++++ .++.+. ....+++|++|+++++ +++.+. +++.+++|++|++++| .++++
T Consensus 43 ~~L~~L~~L~l~~~-~i~~l~-------~l~~l~~L~~L~L~~n-~i~~l~----~~~~l~~L~~L~l~~n-~i~~l--- 105 (210)
T d1h6ta2 43 NELNSIDQIIANNS-DIKSVQ-------GIQYLPNVTKLFLNGN-KLTDIK----PLANLKNLGWLFLDEN-KVKDL--- 105 (210)
T ss_dssp HHHHTCCEEECTTS-CCCCCT-------TGGGCTTCCEEECCSS-CCCCCG----GGTTCTTCCEEECCSS-CCCCG---
T ss_pred HHhcCccEEECcCC-CCCCch-------hHhhCCCCCEEeCCCc-cccCcc----ccccCccccccccccc-ccccc---
Confidence 45777888888777 555431 2456777888888775 555542 2566777888888774 56655
Q ss_pred hhhhcCCCCcEEEEcccC
Q 036689 125 SAAKCLPRLERIAVINCR 142 (595)
Q Consensus 125 ~~~~~l~~L~~L~l~~c~ 142 (595)
+.+..+++|+.|++.+|.
T Consensus 106 ~~l~~l~~L~~L~l~~~~ 123 (210)
T d1h6ta2 106 SSLKDLKKLKSLSLEHNG 123 (210)
T ss_dssp GGGTTCTTCCEEECTTSC
T ss_pred cccccccccccccccccc
Confidence 335667777777777653
No 20
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.25 E-value=3.2e-11 Score=109.30 Aligned_cols=81 Identities=19% Similarity=0.235 Sum_probs=52.0
Q ss_pred cccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccCCCCccEEEecCCCCcccccch
Q 036689 45 EGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFLL 124 (595)
Q Consensus 45 ~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~ 124 (595)
..++++++|+++++ +++.+. ....+++|++|+++++ .++.+. +++.+++|++|++++| .+..+
T Consensus 37 ~~l~~l~~L~l~~~-~i~~l~-------~l~~l~nL~~L~Ls~N-~l~~~~----~l~~l~~L~~L~l~~n-~~~~~--- 99 (199)
T d2omxa2 37 TDLDQVTTLQADRL-GIKSID-------GVEYLNNLTQINFSNN-QLTDIT----PLKNLTKLVDILMNNN-QIADI--- 99 (199)
T ss_dssp HHHTTCCEEECTTS-CCCCCT-------TGGGCTTCCEEECCSS-CCCCCG----GGTTCTTCCEEECCSS-CCCCC---
T ss_pred HHhcCCCEEECCCC-CCCCcc-------ccccCCCcCcCccccc-cccCcc----cccCCccccccccccc-ccccc---
Confidence 45777888888777 555431 2456777777777775 565541 2567777777777775 34444
Q ss_pred hhhhcCCCCcEEEEcccC
Q 036689 125 SAAKCLPRLERIAVINCR 142 (595)
Q Consensus 125 ~~~~~l~~L~~L~l~~c~ 142 (595)
+.++++++|++|++++|.
T Consensus 100 ~~l~~l~~L~~L~l~~~~ 117 (199)
T d2omxa2 100 TPLANLTNLTGLTLFNNQ 117 (199)
T ss_dssp GGGTTCTTCSEEECCSSC
T ss_pred cccccccccccccccccc
Confidence 235667777777776643
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.21 E-value=9.5e-11 Score=107.05 Aligned_cols=102 Identities=21% Similarity=0.283 Sum_probs=79.3
Q ss_pred ccccccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccc
Q 036689 20 GIKDVEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRL 99 (595)
Q Consensus 20 ~l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 99 (595)
.+++|++|++.++.. +.+. .+ +.+++|++|++++| .++.+. ....+++|++|+++++ +++.+.
T Consensus 44 ~L~~L~~L~l~~~~i-~~l~-~l--~~l~~L~~L~L~~n-~i~~l~-------~~~~l~~L~~L~l~~n-~i~~l~---- 106 (210)
T d1h6ta2 44 ELNSIDQIIANNSDI-KSVQ-GI--QYLPNVTKLFLNGN-KLTDIK-------PLANLKNLGWLFLDEN-KVKDLS---- 106 (210)
T ss_dssp HHHTCCEEECTTSCC-CCCT-TG--GGCTTCCEEECCSS-CCCCCG-------GGTTCTTCCEEECCSS-CCCCGG----
T ss_pred HhcCccEEECcCCCC-CCch-hH--hhCCCCCEEeCCCc-cccCcc-------ccccCccccccccccc-cccccc----
Confidence 578999999998876 3332 23 78999999999998 677553 3457899999999996 677652
Q ss_pred cccCCCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcccC
Q 036689 100 SVQSFNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVINCR 142 (595)
Q Consensus 100 ~~~~l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~ 142 (595)
.+..+++|+.|++++|. +..+ ..+.++++++.++++++.
T Consensus 107 ~l~~l~~L~~L~l~~~~-~~~~---~~l~~l~~l~~l~~~~n~ 145 (210)
T d1h6ta2 107 SLKDLKKLKSLSLEHNG-ISDI---NGLVHLPQLESLYLGNNK 145 (210)
T ss_dssp GGTTCTTCCEEECTTSC-CCCC---GGGGGCTTCCEEECCSSC
T ss_pred ccccccccccccccccc-cccc---cccccccccccccccccc
Confidence 36789999999999974 4544 456788999999988743
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.19 E-value=1.2e-10 Score=105.41 Aligned_cols=57 Identities=19% Similarity=0.335 Sum_probs=28.5
Q ss_pred CCccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeeccc
Q 036689 222 LSNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCK 289 (595)
Q Consensus 222 l~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~ 289 (595)
++++++|++++++++.+ + ++ ..+++|++|+++++ .++++.+ ++++++|++|++++|.
T Consensus 39 l~~l~~L~l~~~~i~~l-----~-~l-~~l~nL~~L~Ls~N-~l~~~~~---l~~l~~L~~L~l~~n~ 95 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSI-----D-GV-EYLNNLTQINFSNN-QLTDITP---LKNLTKLVDILMNNNQ 95 (199)
T ss_dssp HTTCCEEECTTSCCCCC-----T-TG-GGCTTCCEEECCSS-CCCCCGG---GTTCTTCCEEECCSSC
T ss_pred hcCCCEEECCCCCCCCc-----c-cc-ccCCCcCcCccccc-cccCccc---ccCCcccccccccccc
Confidence 44555566655555443 1 11 24555666666554 3444322 3555555555555554
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90 E-value=1.7e-09 Score=93.91 Aligned_cols=62 Identities=27% Similarity=0.234 Sum_probs=32.4
Q ss_pred CCccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeeccc
Q 036689 222 LSNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCK 289 (595)
Q Consensus 222 l~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~ 289 (595)
+++|++|++++|.++.+ +..++..+++|+.|+++++ .++++.....+..+++|++|++++|.
T Consensus 62 l~~L~~L~ls~N~i~~l-----~~~~~~~l~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~ 123 (162)
T d1a9na_ 62 LRRLKTLLVNNNRICRI-----GEGLDQALPDLTELILTNN-SLVELGDLDPLASLKSLTYLCILRNP 123 (162)
T ss_dssp CSSCCEEECCSSCCCEE-----CSCHHHHCTTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECCSSG
T ss_pred CcchhhhhcccccccCC-----Cccccccccccccceeccc-cccccccccccccccccchhhcCCCc
Confidence 45555566665555554 3322234566666666654 34443332334556666666666665
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.85 E-value=6.5e-09 Score=85.58 Aligned_cols=99 Identities=20% Similarity=0.239 Sum_probs=51.9
Q ss_pred cEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccCC
Q 036689 25 EYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQSF 104 (595)
Q Consensus 25 ~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~l 104 (595)
|.|++++++.. .+ +.+ +.+++|++|++++| .++.+++ .+..+++|++|+++++ .++.+. ++..+
T Consensus 1 R~L~Ls~n~l~-~l-~~l--~~l~~L~~L~ls~N-~l~~lp~------~~~~l~~L~~L~l~~N-~i~~l~----~~~~l 64 (124)
T d1dcea3 1 RVLHLAHKDLT-VL-CHL--EQLLLVTHLDLSHN-RLRALPP------ALAALRCLEVLQASDN-ALENVD----GVANL 64 (124)
T ss_dssp SEEECTTSCCS-SC-CCG--GGGTTCCEEECCSS-CCCCCCG------GGGGCTTCCEEECCSS-CCCCCG----GGTTC
T ss_pred CEEEcCCCCCC-CC-ccc--ccCCCCCEEECCCC-ccCcchh------hhhhhhcccccccccc-cccccC----ccccc
Confidence 34555555552 22 223 55666666666655 4554421 2345566666666663 454431 24556
Q ss_pred CCccEEEecCCCCcccccchhhhhcCCCCcEEEEcc
Q 036689 105 NELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVIN 140 (595)
Q Consensus 105 ~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~ 140 (595)
++|++|++++ +.+++++....+..+++|++|++++
T Consensus 65 ~~L~~L~l~~-N~i~~~~~~~~l~~~~~L~~L~l~~ 99 (124)
T d1dcea3 65 PRLQELLLCN-NRLQQSAAIQPLVSCPRLVLLNLQG 99 (124)
T ss_dssp SSCCEEECCS-SCCCSSSTTGGGGGCTTCCEEECTT
T ss_pred cccCeEECCC-CccCCCCCchhhcCCCCCCEEECCC
Confidence 6666666666 3555444334455566666666665
No 25
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.83 E-value=4.8e-09 Score=90.92 Aligned_cols=133 Identities=14% Similarity=0.033 Sum_probs=93.9
Q ss_pred cccccccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCcccccccc
Q 036689 19 QGIKDVEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDR 98 (595)
Q Consensus 19 ~~l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 98 (595)
....++++|+|.++.. ..+. .. ...+++|++|+|++| .++.+. .+..+++|++|+++++ .++.+..+
T Consensus 15 ~n~~~lr~L~L~~n~I-~~i~-~~-~~~l~~L~~L~Ls~N-~i~~l~-------~~~~l~~L~~L~ls~N-~i~~l~~~- 81 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKI-PVIE-NL-GATLDQFDAIDFSDN-EIRKLD-------GFPLLRRLKTLLVNNN-RICRIGEG- 81 (162)
T ss_dssp ECTTSCEEEECTTSCC-CSCC-CG-GGGTTCCSEEECCSS-CCCEEC-------CCCCCSSCCEEECCSS-CCCEECSC-
T ss_pred cCcCcCcEEECCCCCC-CccC-cc-ccccccCCEEECCCC-CCCccC-------CcccCcchhhhhcccc-cccCCCcc-
Confidence 3556799999999887 4443 22 267899999999998 788772 3567899999999996 67776322
Q ss_pred ccccCCCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcccCCcceeecccCcccccccccccccccceEecC
Q 036689 99 LSVQSFNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVINCRNIQEIFVVDGEYDAIDHQKIEFGQLSTLCLG 173 (595)
Q Consensus 99 ~~~~~l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~ 173 (595)
....+++|+.|++++| .+++++....++.+++|++|++++|+. ...+.. ....+..+++|+.|+-.
T Consensus 82 -~~~~l~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~i-~~~~~~------r~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 82 -LDQALPDLTELILTNN-SLVELGDLDPLASLKSLTYLCILRNPV-TNKKHY------RLYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp -HHHHCTTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECCSSGG-GGSTTH------HHHHHHHCTTCSEETTE
T ss_pred -ccccccccccceeccc-cccccccccccccccccchhhcCCCcc-ccccch------HHHHHHHCCCcCeeCCC
Confidence 1356899999999995 677665445678899999999999653 322210 00123457888888643
No 26
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.82 E-value=8.2e-09 Score=92.39 Aligned_cols=109 Identities=17% Similarity=0.147 Sum_probs=72.2
Q ss_pred ccccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccc
Q 036689 22 KDVEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSV 101 (595)
Q Consensus 22 ~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~ 101 (595)
.++++|+|+++.....+ .....+++++|++|+|+++ .++.+.+. .+..+++|++|+++++ +++.+..+ .+
T Consensus 29 ~~l~~L~Ls~N~i~~~~-~~~~f~~l~~L~~L~L~~N-~i~~~~~~-----~~~~~~~L~~L~Ls~N-~l~~l~~~--~F 98 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRIS-SDGLFGRLPHLVKLELKRN-QLTGIEPN-----AFEGASHIQELQLGEN-KIKEISNK--MF 98 (192)
T ss_dssp TTCSEEECCSCCCCSBC-CSCSGGGCTTCCEEECCSS-CCCCBCTT-----TTTTCTTCCEEECCSC-CCCEECSS--SS
T ss_pred CCCCEEEeCCCCCcccc-cccccCCCceEeeeecccc-cccccccc-----ccccccccceeeeccc-cccccCHH--HH
Confidence 57778888877663322 2222367778888888777 56555433 4566777888888874 66666433 25
Q ss_pred cCCCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcccC
Q 036689 102 QSFNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVINCR 142 (595)
Q Consensus 102 ~~l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~ 142 (595)
..+++|++|+|++ +.++.+++ ..+..+++|++|++++++
T Consensus 99 ~~l~~L~~L~L~~-N~l~~i~~-~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 99 LGLHQLKTLNLYD-NQISCVMP-GSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp TTCTTCCEEECCS-SCCCEECT-TSSTTCTTCCEEECTTCC
T ss_pred hCCCcccccccCC-ccccccCH-HHhcCCcccccccccccc
Confidence 6777888888887 46776654 566777778888777743
No 27
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.71 E-value=3e-10 Score=116.55 Aligned_cols=116 Identities=15% Similarity=0.141 Sum_probs=70.8
Q ss_pred ccccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccc--cc
Q 036689 22 KDVEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQD--RL 99 (595)
Q Consensus 22 ~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~--~~ 99 (595)
.+|++|++++++....-...+ .+.++++++|+|.+| +++... ...........++|++|+|+++ .+...... ..
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l-~~~l~~l~~L~L~~~-~i~~~~-~~~l~~~L~~~~~L~~LdLs~N-~i~~~~~~~l~~ 77 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAEL-LPLLQQCQVVRLDDC-GLTEAR-CKDISSALRVNPALAELNLRSN-ELGDVGVHCVLQ 77 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHH-HHHHTTCSEEEEESS-CCCHHH-HHHHHHHHHTCTTCCEEECTTC-CCHHHHHHHHHH
T ss_pred CCCCEEEeeCCcCChHHHHHH-HHhCCCCCEEEeCCC-CCCHHH-HHHHHHHHhcCCCCCEEECcCC-cCChHHHHHHHH
Confidence 468999997777643222222 378899999999998 565210 0000112356788999999986 55431100 00
Q ss_pred cc-cCCCCccEEEecCCCCcccccc---hhhhhcCCCCcEEEEcccC
Q 036689 100 SV-QSFNELKTIRVELCDQLSNIFL---LSAAKCLPRLERIAVINCR 142 (595)
Q Consensus 100 ~~-~~l~~L~~L~L~~c~~l~~~~~---~~~~~~l~~L~~L~l~~c~ 142 (595)
.+ ....+|++|++++| .+++... ...+..+++|++|++++|.
T Consensus 78 ~l~~~~~~L~~L~L~~n-~it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 78 GLQTPSCKIQKLSLQNC-CLTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp TTCSTTCCCCEEECTTS-CCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred HHhcCCCCCCEEECCCC-Cccccccccccchhhcccccccccccccc
Confidence 01 12357999999997 4665321 1345678899999998854
No 28
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.70 E-value=2.6e-08 Score=81.81 Aligned_cols=120 Identities=20% Similarity=0.196 Sum_probs=84.7
Q ss_pred ceecccccccccCcccccccccccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCcc
Q 036689 2 RTLKLKFNSVSICSKKLQGIKDVEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILE 81 (595)
Q Consensus 2 ~~l~l~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~ 81 (595)
|.|+|+.|.++. ..+++.+++|++|+++++.. +.++..+ +.+++|++|++++| .++.++ .+..+++|+
T Consensus 1 R~L~Ls~n~l~~-l~~l~~l~~L~~L~ls~N~l-~~lp~~~--~~l~~L~~L~l~~N-~i~~l~-------~~~~l~~L~ 68 (124)
T d1dcea3 1 RVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRL-RALPPAL--AALRCLEVLQASDN-ALENVD-------GVANLPRLQ 68 (124)
T ss_dssp SEEECTTSCCSS-CCCGGGGTTCCEEECCSSCC-CCCCGGG--GGCTTCCEEECCSS-CCCCCG-------GGTTCSSCC
T ss_pred CEEEcCCCCCCC-CcccccCCCCCEEECCCCcc-Ccchhhh--hhhhcccccccccc-cccccC-------ccccccccC
Confidence 678888886532 33577888999999988876 4555445 78999999999988 677552 356788999
Q ss_pred EEeccCccCccccccccccccCCCCccEEEecCCCCccccc--chhhhhcCCCCcEE
Q 036689 82 SLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIF--LLSAAKCLPRLERI 136 (595)
Q Consensus 82 ~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~--~~~~~~~l~~L~~L 136 (595)
+|+++++ .+..+.. ...+..+++|++|++++ +.++..+ .......+|+|+.|
T Consensus 69 ~L~l~~N-~i~~~~~-~~~l~~~~~L~~L~l~~-N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 69 ELLLCNN-RLQQSAA-IQPLVSCPRLVLLNLQG-NSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp EEECCSS-CCCSSST-TGGGGGCTTCCEEECTT-SGGGGSSSCTTHHHHHCTTCSEE
T ss_pred eEECCCC-ccCCCCC-chhhcCCCCCCEEECCC-CcCCcCccHHHHHHHHCcCcceE
Confidence 9999985 6666532 12367788999999988 4555432 22455667777766
No 29
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.65 E-value=7.3e-08 Score=85.95 Aligned_cols=129 Identities=20% Similarity=0.237 Sum_probs=87.0
Q ss_pred ceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCCCCC
Q 036689 226 EVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADDQVP 305 (595)
Q Consensus 226 ~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~ 305 (595)
.+++.++++++.+ |.++ .+++++|+|++. .++...+...++.+++|++|+++++. +..++...+..
T Consensus 11 ~~v~Cs~~~L~~i-----P~~l---p~~l~~L~Ls~N-~i~~~~~~~~f~~l~~L~~L~L~~N~-i~~~~~~~~~~---- 76 (192)
T d1w8aa_ 11 TTVDCTGRGLKEI-----PRDI---PLHTTELLLNDN-ELGRISSDGLFGRLPHLVKLELKRNQ-LTGIEPNAFEG---- 76 (192)
T ss_dssp TEEECTTSCCSSC-----CSCC---CTTCSEEECCSC-CCCSBCCSCSGGGCTTCCEEECCSSC-CCCBCTTTTTT----
T ss_pred CEEEEeCCCcCcc-----CCCC---CCCCCEEEeCCC-CCcccccccccCCCceEeeeeccccc-ccccccccccc----
Confidence 3566666666666 7654 467888888864 55543344456788888888888877 66665533333
Q ss_pred CCcCCCcccEEeecCCCCcccccCCCccccCcccceeeecCCCCccccccccccccCCCCCCCCCCCCCCCCCCcCccCC
Q 036689 306 PNFVFPQVTILRLVGLPELKCLYPGMHTSEWPALKLLDVSACDQVTVFDSELFSFCESSEEDKPDIPAQQPLFLPEKVFP 385 (595)
Q Consensus 306 ~~~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 385 (595)
+++|++|+++++ ++..++.+.. ..+++|+.|+++++ .++.++. ..+..++
T Consensus 77 ----~~~L~~L~Ls~N-~l~~l~~~~F-~~l~~L~~L~L~~N-~l~~i~~-----------------------~~f~~l~ 126 (192)
T d1w8aa_ 77 ----ASHIQELQLGEN-KIKEISNKMF-LGLHQLKTLNLYDN-QISCVMP-----------------------GSFEHLN 126 (192)
T ss_dssp ----CTTCCEEECCSC-CCCEECSSSS-TTCTTCCEEECCSS-CCCEECT-----------------------TSSTTCT
T ss_pred ----ccccceeeeccc-cccccCHHHH-hCCCcccccccCCc-cccccCH-----------------------HHhcCCc
Confidence 778888888884 5666655532 23788888888876 4666666 3346778
Q ss_pred CcceEeccCCCCe
Q 036689 386 NLEELGLDGKDIR 398 (595)
Q Consensus 386 ~L~~L~l~~~~~~ 398 (595)
+|++|++++|+..
T Consensus 127 ~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 127 SLTSLNLASNPFN 139 (192)
T ss_dssp TCCEEECTTCCBC
T ss_pred ccccccccccccc
Confidence 8888888888643
No 30
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.59 E-value=2.2e-09 Score=109.84 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=69.2
Q ss_pred ceecccccccccC--cccccccccccEEEeccCCCCccccc-cc--cccccCCCcEEEcccCCCceEecCCCCCCCcCCc
Q 036689 2 RTLKLKFNSVSIC--SKKLQGIKDVEYLCLDKSQDVKNVLF-DL--DREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDA 76 (595)
Q Consensus 2 ~~l~l~~~~~~~~--~~~~~~l~~L~~L~L~~~~~~~~~~~-~~--~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~ 76 (595)
+.|+|+.+.++-. .+-++.+++++.|+|.+|.. ++... .+ ....+++|++|+|++| .++...-..........
T Consensus 5 ~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i-~~~~~~~l~~~L~~~~~L~~LdLs~N-~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 5 QSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGL-TEARCKDISSALRVNPALAELNLRSN-ELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCC-CHHHHHHHHHHHHTCTTCCEEECTTC-CCHHHHHHHHHHTTCST
T ss_pred CEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCC-CHHHHHHHHHHHhcCCCCCEEECcCC-cCChHHHHHHHHHHhcC
Confidence 4577776654322 22233789999999999965 32211 11 1267899999999998 55421000000001123
Q ss_pred CCCccEEeccCccCccccccc--cccccCCCCccEEEecCCCCccc
Q 036689 77 FPILESLNLYNLIKLERICQD--RLSVQSFNELKTIRVELCDQLSN 120 (595)
Q Consensus 77 ~~~L~~L~l~~~~~l~~~~~~--~~~~~~l~~L~~L~L~~c~~l~~ 120 (595)
..+|++|++++| .++..... ...+..+++|++|++++| .+.+
T Consensus 83 ~~~L~~L~L~~n-~it~~~~~~l~~~l~~~~~L~~L~L~~N-~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNC-CLTGAGCGVLSSTLRTLPTLQELHLSDN-LLGD 126 (460)
T ss_dssp TCCCCEEECTTS-CCBGGGHHHHHHHTTSCTTCCEEECCSS-BCHH
T ss_pred CCCCCEEECCCC-Cccccccccccchhhccccccccccccc-cchh
Confidence 457999999997 56543211 122567899999999996 4554
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.49 E-value=1.6e-09 Score=97.42 Aligned_cols=111 Identities=18% Similarity=0.240 Sum_probs=84.9
Q ss_pred cccccccccccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCcccc
Q 036689 15 SKKLQGIKDVEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERI 94 (595)
Q Consensus 15 ~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~ 94 (595)
+.+++.+++|++|+|+++.. +.+ +.+ +.+++|++|+|++| .++.++ . ....+++|++|+++++ .++.+
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I-~~i-~~l--~~l~~L~~L~Ls~N-~i~~i~-~-----~~~~~~~L~~L~l~~N-~i~~l 108 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNI-EKI-SSL--SGMENLRILSLGRN-LIKKIE-N-----LDAVADTLEELWISYN-QIASL 108 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEE-SCC-CCH--HHHTTCCEEECCEE-EECSCS-S-----HHHHHHHCCEEECSEE-ECCCH
T ss_pred hhHHhcccccceeECcccCC-CCc-ccc--cCCccccChhhccc-cccccc-c-----cccccccccccccccc-ccccc
Confidence 34566789999999998876 444 334 78999999999998 566442 1 3345678999999996 67765
Q ss_pred ccccccccCCCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcccC
Q 036689 95 CQDRLSVQSFNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVINCR 142 (595)
Q Consensus 95 ~~~~~~~~~l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~ 142 (595)
. ++..+++|++|+++++ .+++++....++.+++|++|++++|+
T Consensus 109 ~----~~~~l~~L~~L~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 109 S----GIEKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp H----HHHHHHHSSEEEESEE-ECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred c----cccccccccccccccc-hhccccccccccCCCccceeecCCCc
Confidence 1 2677899999999994 67766544567899999999999964
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.31 E-value=2.8e-08 Score=89.04 Aligned_cols=59 Identities=19% Similarity=0.143 Sum_probs=29.3
Q ss_pred CccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeeccc
Q 036689 223 SNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCK 289 (595)
Q Consensus 223 ~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~ 289 (595)
+.|+.|++++|+++.+ +.. ..+++|+.|+++++ .++++.....+..+++|++|++++++
T Consensus 93 ~~L~~L~l~~N~i~~l-----~~~--~~l~~L~~L~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 93 DTLEELWISYNQIASL-----SGI--EKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHCCEEECSEEECCCH-----HHH--HHHHHSSEEEESEE-ECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred cccccccccccccccc-----ccc--cccccccccccccc-hhccccccccccCCCccceeecCCCc
Confidence 3455666666555443 211 24555666666543 33333222334555566666665554
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24 E-value=2.3e-06 Score=72.94 Aligned_cols=105 Identities=13% Similarity=0.147 Sum_probs=71.5
Q ss_pred ccEEEeccCCCCccccccccccccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccC
Q 036689 24 VEYLCLDKSQDVKNVLFDLDREGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQS 103 (595)
Q Consensus 24 L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~ 103 (595)
.+.++..+.+. .+.+..+ .++++|++|++.++..++.+.+. .+..+++|++|+++++ +++.+..+ .+..
T Consensus 10 ~~~l~c~~~~~-~~~p~~l--~~l~~l~~L~l~~n~~l~~i~~~-----~f~~l~~L~~L~Ls~N-~l~~i~~~--~f~~ 78 (156)
T d2ifga3 10 SSGLRCTRDGA-LDSLHHL--PGAENLTELYIENQQHLQHLELR-----DLRGLGELRNLTIVKS-GLRFVAPD--AFHF 78 (156)
T ss_dssp SSCEECCSSCC-CTTTTTS--CSCSCCSEEECCSCSSCCEECGG-----GSCSCCCCSEEECCSS-CCCEECTT--GGGS
T ss_pred CCeEEecCCCC-ccCcccc--cCccccCeeecCCCccccccCch-----hhccccccCcceeecc-ccCCcccc--cccc
Confidence 34566655544 3334444 67788888888777678887544 5667888888888885 77776333 3677
Q ss_pred CCCccEEEecCCCCcccccchhhhhcCCCCcEEEEcccC
Q 036689 104 FNELKTIRVELCDQLSNIFLLSAAKCLPRLERIAVINCR 142 (595)
Q Consensus 104 l~~L~~L~L~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~ 142 (595)
+++|++|+|++ +.++.++. ..+.. ..|++|++++++
T Consensus 79 l~~L~~L~Ls~-N~l~~l~~-~~~~~-~~l~~L~L~~Np 114 (156)
T d2ifga3 79 TPRLSRLNLSF-NALESLSW-KTVQG-LSLQELVLSGNP 114 (156)
T ss_dssp CSCCCEEECCS-SCCSCCCS-TTTCS-CCCCEEECCSSC
T ss_pred cccccceeccC-CCCcccCh-hhhcc-ccccccccCCCc
Confidence 88888888888 57776664 44443 468888888754
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.22 E-value=5.7e-08 Score=95.38 Aligned_cols=122 Identities=18% Similarity=0.122 Sum_probs=62.1
Q ss_pred cCCccceeecccccceeecccC-CCccccccCCCccEEEEecCCCCcccc---chhhhhccCCCcEEEeecccccceecc
Q 036689 221 ALSNLEVLEMNKVNIEKIWHNQ-LPVAMFLCFQNLTRLILRKCPKLKYIF---SASMLGSFEHLQHLEIRYCKGLQEIIS 296 (595)
Q Consensus 221 ~l~~L~~L~l~~~~l~~~~~~~-~~~~~~~~l~~L~~L~L~~c~~l~~l~---~~~~~~~l~~L~~L~l~~c~~l~~~~~ 296 (595)
..+.|+.|++++|.++..+... +...+ ..+++|+.|+++++. ++... ....+..+++|++|++++|. +++...
T Consensus 184 ~~~~L~~L~L~~n~i~~~g~~~~l~~~l-~~~~~L~~L~Ls~N~-i~~~g~~~L~~~l~~~~~L~~L~Ls~n~-i~~~g~ 260 (344)
T d2ca6a1 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGL-AYCQELKVLDLQDNT-FTHLGSSALAIALKSWPNLRELGLNDCL-LSARGA 260 (344)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTG-GGCTTCCEEECCSSC-CHHHHHHHHHHHGGGCTTCCEEECTTCC-CCHHHH
T ss_pred hhhhhcccccccccccccccccchhhhh-cchhhhccccccccc-ccccccccccccccccccchhhhhhcCc-cCchhh
Confidence 3566777777777655321111 11111 356778888887653 33211 11234667778888888776 554322
Q ss_pred cccCCCCCCCCcCCCcccEEeecCCCCcccccCC----CccccCcccceeeecCCC
Q 036689 297 KEGADDQVPPNFVFPQVTILRLVGLPELKCLYPG----MHTSEWPALKLLDVSACD 348 (595)
Q Consensus 297 ~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~----~~~~~~~~L~~L~l~~c~ 348 (595)
...... ......+.|++|+++++. +...... .....+++|+.|+++++.
T Consensus 261 ~~l~~~--l~~~~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~~~~~L~~L~l~~N~ 313 (344)
T d2ca6a1 261 AAVVDA--FSKLENIGLQTLRLQYNE-IELDAVRTLKTVIDEKMPDLLFLELNGNR 313 (344)
T ss_dssp HHHHHH--HHTCSSCCCCEEECCSSC-CBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHHHHH--hhhccCCCCCEEECCCCc-CChHHHHHHHHHHHccCCCCCEEECCCCc
Confidence 111100 000114668888888754 4321100 011125778888887754
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.21 E-value=2.5e-06 Score=72.73 Aligned_cols=106 Identities=18% Similarity=0.055 Sum_probs=68.0
Q ss_pred ccceeecccccceeecccCCCccccccCCCccEEEEecCCCCccccchhhhhccCCCcEEEeecccccceecccccCCCC
Q 036689 224 NLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKCPKLKYIFSASMLGSFEHLQHLEIRYCKGLQEIISKEGADDQ 303 (595)
Q Consensus 224 ~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~ 303 (595)
..+.++.++.++.+. |..+ ..+++|++|++.+.+.++.+.+. .+.++++|++|+++++. ++.+++..+.+
T Consensus 9 ~~~~l~c~~~~~~~~-----p~~l-~~l~~l~~L~l~~n~~l~~i~~~-~f~~l~~L~~L~Ls~N~-l~~i~~~~f~~-- 78 (156)
T d2ifga3 9 GSSGLRCTRDGALDS-----LHHL-PGAENLTELYIENQQHLQHLELR-DLRGLGELRNLTIVKSG-LRFVAPDAFHF-- 78 (156)
T ss_dssp SSSCEECCSSCCCTT-----TTTS-CSCSCCSEEECCSCSSCCEECGG-GSCSCCCCSEEECCSSC-CCEECTTGGGS--
T ss_pred CCCeEEecCCCCccC-----cccc-cCccccCeeecCCCccccccCch-hhccccccCcceeeccc-cCCcccccccc--
Confidence 344556555544443 4443 35677888888766667776443 45777888888888776 77776644443
Q ss_pred CCCCcCCCcccEEeecCCCCcccccCCCccccCcccceeeecCCC
Q 036689 304 VPPNFVFPQVTILRLVGLPELKCLYPGMHTSEWPALKLLDVSACD 348 (595)
Q Consensus 304 ~~~~~~l~~L~~L~L~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~ 348 (595)
+++|++|+|++ ++++.++.+... ..+|++|++++.+
T Consensus 79 ------l~~L~~L~Ls~-N~l~~l~~~~~~--~~~l~~L~L~~Np 114 (156)
T d2ifga3 79 ------TPRLSRLNLSF-NALESLSWKTVQ--GLSLQELVLSGNP 114 (156)
T ss_dssp ------CSCCCEEECCS-SCCSCCCSTTTC--SCCCCEEECCSSC
T ss_pred ------cccccceeccC-CCCcccChhhhc--cccccccccCCCc
Confidence 77888888887 446666655432 4467788887664
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.04 E-value=4e-07 Score=89.12 Aligned_cols=41 Identities=12% Similarity=0.079 Sum_probs=20.8
Q ss_pred cCCccceeecccccceeecccCCCccccccCCCccEEEEecC
Q 036689 221 ALSNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKC 262 (595)
Q Consensus 221 ~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c 262 (595)
..++|+.|++++|.+...+...+...+ ...++|++|++++|
T Consensus 91 ~~~~L~~L~L~~n~i~~~~~~~l~~~l-~~~~~L~~L~l~~n 131 (344)
T d2ca6a1 91 KCPKLHTVRLSDNAFGPTAQEPLIDFL-SKHTPLEHLYLHNN 131 (344)
T ss_dssp TCTTCCEEECCSCCCCTTTHHHHHHHH-HHCTTCCEEECCSS
T ss_pred hCCCcccccccccccccccccchhhhh-cccccchheecccc
Confidence 355666666666654432222222221 34566777777665
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.57 E-value=0.00085 Score=56.77 Aligned_cols=85 Identities=22% Similarity=0.234 Sum_probs=58.7
Q ss_pred cccCCCcEEEcccCCCceEecCCCCCCCcCCcCCCccEEeccCccCccccccccccccCCCCccEEEecCCCCcccccc-
Q 036689 45 EGFLQLKHLHVQNNPDFMCIVDSKERVPLDDAFPILESLNLYNLIKLERICQDRLSVQSFNELKTIRVELCDQLSNIFL- 123 (595)
Q Consensus 45 ~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~l~~L~~L~L~~c~~l~~~~~- 123 (595)
..+++|++|+|++| .++.+.+ ....+..+++|+.|+++++ .++.+.... .....+|+.|++++++ +.....
T Consensus 62 ~~~~~L~~L~Ls~N-~i~~l~~---~~~~~~~l~~L~~L~Ls~N-~i~~l~~l~--~l~~~~L~~L~L~~Np-l~~~~~~ 133 (162)
T d1koha1 62 ENIPELLSLNLSNN-RLYRLDD---MSSIVQKAPNLKILNLSGN-ELKSERELD--KIKGLKLEELWLDGNS-LSDTFRD 133 (162)
T ss_dssp HHCTTCCCCCCCSS-CCCCCSG---GGTHHHHSTTCCCCCCTTS-CCCCGGGHH--HHTTCCCSSCCCTTST-TSSSSSS
T ss_pred HhCCCCCEeeCCCc-cccCCch---hHHHHhhCCcccccccccC-ccccchhhh--hhhccccceeecCCCC-cCcCccc
Confidence 57999999999999 6775521 1113457899999999995 777763321 2345679999999954 433221
Q ss_pred -----hhhhhcCCCCcEEE
Q 036689 124 -----LSAAKCLPRLERIA 137 (595)
Q Consensus 124 -----~~~~~~l~~L~~L~ 137 (595)
...++.+|+|+.||
T Consensus 134 ~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 134 QSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHHHHTTSTTCCEET
T ss_pred chhHHHHHHHHCCCCCEEC
Confidence 14567899999996
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.21 E-value=0.0022 Score=54.13 Aligned_cols=84 Identities=24% Similarity=0.154 Sum_probs=51.0
Q ss_pred ccCCccEEeEeCCCCCccccc-chHHhhcccccEEEEcCcccccchhcccCccccccccccccccceecccccccccccc
Q 036689 443 SFRNLKILEVSGCKKLTNLVA-SSAAQSLVALVKMQVFGCRAMTQVVKSEGNQLAREEIVFNKLKMLSLLDLDSLTSFCS 521 (595)
Q Consensus 443 ~l~~L~~L~l~~c~~l~~~~~-~~~~~~l~~L~~L~l~~c~~l~~i~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~ 521 (595)
.+++|+.|++++ ++++++.. ...++.+++|+.|+++++. ++++..... .....|+.|++.++|-......
T Consensus 63 ~~~~L~~L~Ls~-N~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~-------l~~~~L~~L~L~~Npl~~~~~~ 133 (162)
T d1koha1 63 NIPELLSLNLSN-NRLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDK-------IKGLKLEELWLDGNSLSDTFRD 133 (162)
T ss_dssp HCTTCCCCCCCS-SCCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHH-------HTTCCCSSCCCTTSTTSSSSSS
T ss_pred hCCCCCEeeCCC-ccccCCchhHHHHhhCCcccccccccCc-cccchhhhh-------hhccccceeecCCCCcCcCccc
Confidence 467888888888 56776532 2445678888888888876 666543211 1245688888888653322211
Q ss_pred C-----cccccCCCccEEE
Q 036689 522 G-----NYIFKFPSLEVLF 535 (595)
Q Consensus 522 ~-----~~~~~~~~L~~L~ 535 (595)
. .....+|+|++|+
T Consensus 134 ~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 134 QSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHHHHTTSTTCCEET
T ss_pred chhHHHHHHHHCCCCCEEC
Confidence 1 0113477777775
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.11 E-value=0.0065 Score=51.30 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=16.8
Q ss_pred CCCccEEEecCCCCccccc---chhhhhcCCCCcEEEEccc
Q 036689 104 FNELKTIRVELCDQLSNIF---LLSAAKCLPRLERIAVINC 141 (595)
Q Consensus 104 l~~L~~L~L~~c~~l~~~~---~~~~~~~l~~L~~L~l~~c 141 (595)
.+.|++|+|++++.+.... ....+...+.|++|++++|
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n 54 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANT 54 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTS
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeecccc
Confidence 3555555555543333211 0123334445555555553
No 40
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.49 E-value=0.011 Score=49.59 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=17.4
Q ss_pred CCCccEEEecCCCCcccccc---hhhhhcCCCCcEEEEccc
Q 036689 104 FNELKTIRVELCDQLSNIFL---LSAAKCLPRLERIAVINC 141 (595)
Q Consensus 104 l~~L~~L~L~~c~~l~~~~~---~~~~~~l~~L~~L~l~~c 141 (595)
.+.|++|+++++..++.... ...+...++|++|++++|
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n 56 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGT 56 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTS
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCC
Confidence 45555666655433433111 122234555555555554
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=93.04 E-value=0.018 Score=48.34 Aligned_cols=15 Identities=13% Similarity=0.297 Sum_probs=7.9
Q ss_pred CCccceeecccccce
Q 036689 222 LSNLEVLEMNKVNIE 236 (595)
Q Consensus 222 l~~L~~L~l~~~~l~ 236 (595)
.+.|++|++++|.+.
T Consensus 43 n~~L~~L~Ls~n~l~ 57 (167)
T d1pgva_ 43 SKHIEKFSLANTAIS 57 (167)
T ss_dssp CSCCCEEECTTSCCB
T ss_pred CCccceeeccccccc
Confidence 445555555555444
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=86.96 E-value=0.11 Score=43.03 Aligned_cols=41 Identities=7% Similarity=-0.021 Sum_probs=17.9
Q ss_pred cCCccceeecccccceeecccCCCccccccCCCccEEEEecC
Q 036689 221 ALSNLEVLEMNKVNIEKIWHNQLPVAMFLCFQNLTRLILRKC 262 (595)
Q Consensus 221 ~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~c 262 (595)
..++|++|++++|.+...+...+...+ ...++++.+++.+|
T Consensus 44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l-~~~~~l~~l~l~~~ 84 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSNDPVAFALAEML-KVNNTLKSLNVESN 84 (166)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHH-HHCSSCCEEECCSS
T ss_pred cCCccCeeeccCCcccHHHHHHHHHHH-hhcccchhhhhccc
Confidence 345566666665544432221111111 23445555555544
Done!